LOCUS       DALMNS010000001        68726 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.001, whole genome shotgun sequence.
ACCESSION   DALMNS010000001 DALMNS010000000
VERSION     DALMNS010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 68726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 68726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..68726
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.001"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            135..314
                     /gene="prli42"
                     /locus_tag="O6Y56_000001"
     CDS             135..314
                     /gene="prli42"
                     /locus_tag="O6Y56_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stressosome-associated protein Prli42"
                     /protein_id="HDB5573306.1"
                     /translation="MLVISSQVKSFISYVVIINTKVIHLEAHKMQNKVLRIIIIVMLV
                     SVVLALLLTSIIPIL"
     gene            complement(441..1421)
                     /locus_tag="O6Y56_000002"
     CDS             complement(441..1421)
                     /locus_tag="O6Y56_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HDB5573307.1"
                     /translation="MLKLNPYKIGFRTIKTAVGMTLGVIISKLLGLDNYASSAILVVL
                     CIKHTKVHSLQAIISRLVSCFLVLFLGSAIFSLLGQSPIVLGIIVLLFIPLTVVLKVQ
                     EGVITSCVILLHVFNAKSIDAHLIVNETLLLLIGLSIAFTMNLMMPSLDKQLDEYKCK
                     IEQQIADIFSKYSYICEKYEDTIAIEFEALLLNIKKAKSIAFRDVKNHFVRNENSYYH
                     YFDMREEQVELLMRMKPLIESICHKDPLLNDVASLLKEIGLNVNSNDYTAMRLHNLYE
                     TRLKLDELPLPTTHKALNSRASIIQILNELEEYLQIKSQFGSLKMHSEVA"
     gene            complement(1435..1872)
                     /locus_tag="O6Y56_000003"
     CDS             complement(1435..1872)
                     /locus_tag="O6Y56_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrxA/BrxB family bacilliredoxin"
                     /protein_id="HDB5573308.1"
                     /translation="MDMNFDLYMNGVVEQARNEIESAGYEQLTTAEDVDKVLKQDGTT
                     LVMINSVCGCAGGIARPAASHALHYDVLPDRLVTVFAGQDKEATQRAREYFEGYAPSS
                     PSFALLKDGKITEMIERHQIEGHDVMNVINQLQTLFNKYCEER"
     gene            complement(2223..3497)
                     /locus_tag="O6Y56_000004"
     CDS             complement(2223..3497)
                     /locus_tag="O6Y56_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HDB5573309.1"
                     /translation="MEITMPKLGESVHEGTIEQWLVSVGDHIDEYEPLCEVITDKVTA
                     EVPSTISGTITEILVEAGQTVAIDTIICKIETADEKTNETTEEIQAKVDEDTQKSTKR
                     ASATVEQTSTAKQNQPRNNGRYSPVVFKLASEHDIDLSQVVGSGFEGRVTKKDLMSVI
                     ENGGTTAQSDKQVQTQSTSVDTSSNQSSEGNSENSTIPVNGVRKAIAQNMVNSVTEIP
                     HAWMMIEVDATNLVNTRNHYKNNFKNKEGYNLTFFAFFVKAVADALKAYPLLNSSWQG
                     NEIVLHKDINISIAVADENKLYVPVIKHADEKSIKGIAREINTLATKARNKQLTTEDM
                     QGGTFTVNNTGTFGSVSSMGIINHPQAAILQVESIVKKPVVINDMIAIRSMVNLCISI
                     DHRILDGLQTGKFMNHIKQRIEQYTLENTNIY"
     gene            complement(3510..4493)
                     /locus_tag="O6Y56_000005"
     CDS             complement(3510..4493)
                     /locus_tag="O6Y56_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HDB5573310.1"
                     /translation="MAKLSYLEAIRQAQDLALQQNKDVFILGEDVGKKGGVFGTTQGL
                     QQQYGEDRVIDTPLAESNIVGTAIGAAMVGKRPIAEIQFADFILPATNQIISEAAKMR
                     YRSNNEWQCPLTIRAPFGGGVHGGLYHSQSIESIFASSPGLTIVIPSTPYDAKGLLLS
                     SIESNDPVLYFEHKKAYRFLKEEVPEEYYTVPLGKADVKREGEDLTVFCYGLMVNYCL
                     QAADILAADGINVEVVDLRTVYPLDKETIIDRAKHTGKVLLVTEDNLEGSIMSEVSAI
                     IAEHCLFELDAPIMRLAAPDVPSMPFSPVLENEIMMNPEKILNKMRELAEF"
     gene            complement(4493..5485)
                     /locus_tag="O6Y56_000006"
     CDS             complement(4493..5485)
                     /locus_tag="O6Y56_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HDB5573311.1"
                     /translation="MIDYKSLGLSEEDLKVIYKWMDLGRKIDERLWLLNRAGKIPFVV
                     SGQGQEATQIGMAYALEEGDITAPYYRDLAFVTYMGISAYDTFLSAFGKKDDVNSGGK
                     QMPSHFSSRAKNILSQSSPVATQIPHAVGAALALKMDGKKKIATATVGEGSSNQGDFH
                     EGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEKLSDRALGYGIHGEQVDGNDPLA
                     MYKAMKEARDRAISGQGSTLIEAVTSRMTAHSSDDDDQYRTKEEREALKKADCNEKFK
                     KELLSAGIIDDAWLAEIEAEHKDIINKATKAAEDAPYPSVEEAYAFVYEEGSLN"
     gene            complement(5501..6922)
                     /gene="lpdA"
                     /locus_tag="O6Y56_000007"
     CDS             complement(5501..6922)
                     /gene="lpdA"
                     /locus_tag="O6Y56_000007"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HDB5573312.1"
                     /translation="MSEKQYDLVVLGGGTAGYVAAIRASQLGKKVAIVERQLLGGTCL
                     HKGCIPTKSLLKSAEVFQTVKQAAMFGVDVKDANVNFENMLARKEDIINQMYQGVKHL
                     MQHNHIDIYNGTGRILGTSIFSPQSGTISVEYEDGESDLLPNQFVLIATGSSPAELPF
                     LSFDHDKILSSDDILSLKTLPSSVGIIGGGVIGMEFASLMIDLGVDVTVIEAGERILP
                     TESKQASQLLKKSLSARGVKFYEGIKLSENDINVNEDGVTFEISSDIIKVDKVLLSIG
                     RKPNTSDIGLNNTKIKLSTSGHILTNEFQQTEDKHIYAAGDCIGKLQLAHVGSKEGVV
                     AVDHMFEGNPIPVNYNMMPKCIYSQPEIASIGLNIEQAKAEGMKVKSFKVPFKAIGKA
                     VIDSHDANEGYSEMVIDQSTEEIVGINMIGPHVTELINEASLLQFMNGSALELGLTTH
                     AHPSISEVLMELGLKAESRAIHV"
     gene            complement(7073..8752)
                     /gene="recN"
                     /locus_tag="O6Y56_000008"
     CDS             complement(7073..8752)
                     /gene="recN"
                     /locus_tag="O6Y56_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HDB5573313.1"
                     /translation="MLQTLSIKQFAIIEELEIQFSDGLTVLSGETGSGKSIIIDAIGQ
                     LIGMRASSDFVRHGEKKAVIEGIFDIDESKDAIHILKNMDIDVDEDFLLVKREIFSSG
                     KSLCKINNQTVTLQDLRKVMQELLDIHGQHETQSLLKQKYHLTLLDNYAESRYQDLLD
                     KYHQTFQNYKAKKKELEDLESADQALLQRLDLMKFQLEELSEAHLKEGEIEQLEIDIK
                     RIQNSEKLSLALNNAHMTLTDENAITDRLYELSNHLLTINDIVPNKYDKLKEDIDQFY
                     YILEDAKHELYDEMANTEFDEQVLNEYESRMNLLNNLKRKYGKDISELIAYQEKLNNE
                     INKIENYEQSTSQLREEINALYNQVIEVGQALSKQRRIVARELRDHIVSEIQNLQMKD
                     ANLEISFKKLEEPNIDGIEFVEFLISPNKGEPLKSLNKIASGGELSRIMLALKSIFVK
                     SRGQTAILFDEVDSGVSGQAAQKMAEKMRDIAEYIQVICISHLPQVASMSDHHLLISK
                     SSKDDRTTTQVQELIGDDKVDEIARMISGASVTDLTRENAREMIQHNQRRR"
     gene            complement(8768..9220)
                     /gene="argR"
                     /locus_tag="O6Y56_000009"
     CDS             complement(8768..9220)
                     /gene="argR"
                     /locus_tag="O6Y56_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HDB5573314.1"
                     /translation="MTKKSVRHIKIREIISNEQIETQDELVKRLNDYDLNVTQATVSR
                     DIKELQLIKVPIPSGQYVYSLPNDRKFHPLEKLGRYLMDSFVNIDGTDNLLVLKTLPG
                     NAQSIGAILDQINWEEVLGTICGDDTCLIICRSKEASDEIKSRIFNLL"
     gene            complement(9652..10533)
                     /locus_tag="O6Y56_000010"
     CDS             complement(9652..10533)
                     /locus_tag="O6Y56_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDB5573315.1"
                     /translation="MTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKR
                     IRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKV
                     YGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQS
                     EGQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKD
                     DLLDCYGDEAKLGKKVGSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVDELMQIDEQF
                     NTKHLLEIVDLFYSRDH"
     gene            complement(10511..10741)
                     /locus_tag="O6Y56_000011"
     CDS             complement(10511..10741)
                     /locus_tag="O6Y56_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDB5573316.1"
                     /translation="MTKETQSFEEMMQELEQIVQKLDNETVSLEESLDLYQRGMKLSA
                     ACDTTLKNAEKKVNDLIKEEAEDVKNDESTDE"
     gene            complement(10734..12071)
                     /locus_tag="O6Y56_000012"
     CDS             complement(10734..12071)
                     /locus_tag="O6Y56_000012"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDB5573317.1"
                     /translation="MSDYLSVSALTKYIKYKFDQDPHLQSVLIKGELSNFKKHSSGHL
                     YFNVKDKESVISAMMFKGSASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLD
                     GIGNLYQKLEALKKKLTEEGCFDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSR
                     FPLAEQIQISTLVQGEKAKDDIIEKIEYADSLGVDTIIVGRGGGSIEDLWNFNEEAVV
                     RAIYNCKTPIISAVGHETDFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFT
                     LTRFIKKHLEQQRKHVEHLSSYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQR
                     HRLMLLQQRYNLKALLSSVNQEQQNNLQLTNQLVKLLNSKILSYKNDLKNKVENLNNL
                     SPTNTMLRGYAIVNKKDEVITSTKDLTENDQLTLTMKDGLVDAKVTKVRCNND"
     gene            complement(12088..12477)
                     /gene="nusB"
                     /locus_tag="O6Y56_000013"
     CDS             complement(12088..12477)
                     /gene="nusB"
                     /locus_tag="O6Y56_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDB5573318.1"
                     /translation="MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEF
                     IHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMN
                     EAVELTKQFSDDDHYKFINGVLSNIKK"
     gene            complement(12537..12899)
                     /locus_tag="O6Y56_000014"
     CDS             complement(12537..12899)
                     /locus_tag="O6Y56_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HDB5573319.1"
                     /translation="MVKVTDYSNSKLGKVEIAPEVLSVIASIATSEVEGITGHFAELK
                     ETNLEKVSRKNLSRDLKIESKEDGIYIDVYCALKHGVNISKTANKIQTSIFNSISNMT
                     AIEPKQINIHITQIVIEK"
     gene            complement(12914..14269)
                     /gene="accC"
                     /locus_tag="O6Y56_000015"
     CDS             complement(12914..14269)
                     /gene="accC"
                     /locus_tag="O6Y56_000015"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDB5573320.1"
                     /translation="MKKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDKDALHTQIA
                     DEAYCVGPTLSKDSYLNIPNILSIATSTGCDGVHPGYGFLAENADFAELCEACQLKFI
                     GPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATA
                     GGGGKGIRVARDEKELETGFRMTEQEAQTAFGNGGLYMEKFIENFRHIEIQIVGDSYG
                     NVIHLGERDCTIQRRMQKLVEEAPSPILDDETRREMGNAAVRAAKAVNYENAGTIEFI
                     YDLNDNKFYFMEMNTRIQVEHPVTEMVTGIDLVKLQLQVAMGDVLPYKQEDIKLTGHA
                     IEFRINAENPYKNFMPSPGKIEQYLAPGGYGVRIESACYTNYTIPPYYDSMVAKLIIH
                     EPTRDEAIMAGIRALSEFVVLGIDTTIPFHIKLLNNDIFRSGKFNTNFLEQNSIMNDE
                     G"
     gene            complement(14269..14733)
                     /gene="accB"
                     /locus_tag="O6Y56_000016"
     CDS             complement(14269..14733)
                     /gene="accB"
                     /locus_tag="O6Y56_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDB5573321.1"
                     /translation="MNFKEIKELIEILDKSTLTEINIEDTKGKVTLKKEKETEIITPQ
                     ISQMPVEAAAMPMPQVQSTDSNKTEAPKPTSDNHKTINAPMVGTFYKSPSPDEEAYVQ
                     VGDTVSNETTVCILEAMKLFNEIQAEISGEIVEILVEDGQMVEYGQPLFKVK"
     gene            complement(15206..15763)
                     /gene="efp"
                     /locus_tag="O6Y56_000017"
     CDS             complement(15206..15763)
                     /gene="efp"
                     /locus_tag="O6Y56_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000626504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDB5573322.1"
                     /translation="MISVNDFKTGLTISVDNAIWKVIDFQHVKPGKGSAFVRSKLRNL
                     RTGAIQEKTFRAGEKVEPAMIENRRMQYLYADGDNHVFMDNESFEQTELSSDYLKEEL
                     NYLKEGMEVQIQTYEGETIGVELPKTVELTVTETEPGIKGDTATGATKSATVETGYTL
                     NVPLFVNEGDVLIINTGDGSYISRG"
     gene            complement(15789..16850)
                     /locus_tag="O6Y56_000018"
     CDS             complement(15789..16850)
                     /locus_tag="O6Y56_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HDB5573323.1"
                     /translation="MSRITQVHRILEQKHLDAIIILSDYNRRYLSGFTGTSGALIISK
                     DKQYLITDFRYIDQATKQAPNYEIINRKSTIIGEIKELLHQENFENVGFEGHHVSYDT
                     YLELNKSRISLISISNTVDKIRDVKDADEIALIQKAANIVDETYEYILTVVKAGMTEK
                     ELKAILESKMLELGADGPSFDTIVASGHRGALPHGVASDKIIEKGDMITLDFGAYYNG
                     YCSDITRTFAIGEPDPKLKEIYQIVLESQMKAINEIRPGMTGAEADAISRNYLESKGY
                     GKEFGHSLGHGIGLEIHEGPMLARTIQDKLQVNNCVTVEPGVYIEGLGGIRIEDDILI
                     TENGCQVFTKCTKDLIVLT"
     gene            16955..17536
                     /locus_tag="O6Y56_000019"
     CDS             16955..17536
                     /locus_tag="O6Y56_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573324.1"
                     /translation="MKKLVSIVGATLLLAGCGSQNLAPLEEKTTDLREDNHQLKLDIQ
                     ELNQQISDSKSKIKGLEKDKENSKKTASNNTKIKLMNVTSTYYDKVAKALKSYNDIEK
                     DVSKNKGDKNIQSKLNQISNDIQSAHTSYKDAIDGLSLSDDDKKTSKNIDKLNSDLNH
                     AFDDIKNGYQNKDKKQLTKGQQALSKLNLNAKS"
     gene            17550..17768
                     /locus_tag="O6Y56_000020"
     CDS             17550..17768
                     /locus_tag="O6Y56_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573325.1"
                     /translation="MRNIIFYLVLIIAAIGLVMNLDAFIFSIVRMLVSFAVIAGIIYL
                     IYYFFILTEDQRKYRKAMRKYKRNQRRK"
     gene            complement(17832..18662)
                     /locus_tag="O6Y56_000021"
     CDS             complement(17832..18662)
                     /locus_tag="O6Y56_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase family protein"
                     /protein_id="HDB5573326.1"
                     /translation="MTETWNFINTGSKDPYYNMAMDEALLNFVSRGEIDPVIRFYTWN
                     PATLSIGYFQRLQKEIDIDKVKEKGFGLVRRQTGGRGVLHDKELTYSVIVPESHPNMP
                     STVTEAYRVISQGLLEGFKNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVV
                     EGRKIAGSAQTRQKGVILQHGSILQDIDIDELFDMFIYKNERLKLKMKEAFVEKAVAI
                     NDISDEHITISQMEEAFEKGFKKGLNIELKPLELTEAQLAEVEELTEKYRSDEWMFRK
                     "
     gene            18820..19206
                     /locus_tag="O6Y56_000022"
     CDS             18820..19206
                     /locus_tag="O6Y56_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDB5573327.1"
                     /translation="MSASLYIAIILVIAIIAYMIVQQILNKRAVKELDQNEFHNGIRK
                     AQVIDVREKVDYDYGHINGSRNIPMTMFRQRFQGLRKDQPVYLCDANGIASYRAARIL
                     KKNGYTDIYMLKGGYKKWTGKIKSKK"
     gene            complement(19570..21042)
                     /gene="gcvPB"
                     /locus_tag="O6Y56_000023"
     CDS             complement(19570..21042)
                     /gene="gcvPB"
                     /locus_tag="O6Y56_000023"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HDB5573328.1"
                     /translation="MTSKSSPLIFERSREGRYAYSLPISDIKTNSVESLLDDKFIRKN
                     KAEFPEVAELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESH
                     PLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGE
                     GHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVVNENTAAIMLTN
                     PNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNAIMDKVRPGDMGFDAVHLNLHKTFT
                     GPHGGGGPGSGPVGVVKELASYLPKPMVIKDGDKFKYDNDIKNSIGRVKPFYGNFGIY
                     LRAYTYIRTMGATGLKEVSEAAVLNANYIKARLSEHFEIPYKQYCKHEFVLSGVRQKE
                     FGVRTLDMAKRLLDFGVHPPTIYFPLNVEEGMMIEPTETESKETLDYFIDTLISIAEE
                     AKNDPDKVLEAPHTTVIDRLDEATAARKPILKFENLKQEK"
     gene            complement(21035..22381)
                     /gene="gcvPA"
                     /locus_tag="O6Y56_000024"
     CDS             complement(21035..22381)
                     /gene="gcvPA"
                     /locus_tag="O6Y56_000024"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HDB5573329.1"
                     /translation="MSHRYIPLTEKDKQEMLQTIGAKSIGELFGDVPSDILLNRDLNI
                     AEGEAETTLLRRLNRIASKNITKETHTSFLGAGVYDHYAPSVVDAMISRSEFYTAYTP
                     YQPEISQGELQAIFEFQTLICELTDMDVANSSMYDGMTSFAEACILAFSQTKKNKIVV
                     SKGLHYQALQVLHTYAKTRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQYPNFY
                     GSIEDLEKIHSFIEDKKALFIVYANPLALGLLTPPGSFGADIVVGDTQPFGIPAQFGG
                     PHCGYFATTKKLMRKVPGRLVGQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQA
                     LNALASSIAMSALGKQGIYDIAVQNIEHANYAKQQFIKKGFEVLDGTSFNEFVVKFDK
                     PIQQVNEELVKYNIIGGFDLGVVSDDFKNHMLIAVTELRTKDEIDTFVEKAGELND"
     gene            complement(22401..23492)
                     /gene="gcvT"
                     /locus_tag="O6Y56_000025"
     CDS             complement(22401..23492)
                     /gene="gcvT"
                     /locus_tag="O6Y56_000025"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HDB5573330.1"
                     /translation="MSSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFSSIKEEHNAVR
                     YEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLV
                     IYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVSNQYGQLAIQGPKARDLIN
                     QLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEY
                     NVMPCGLGARDTLRLEAGLPLHGQDLTESITPYEGGIAFASKPLIDADFIGKSVLKDQ
                     KENGAPRRTVGLELLEKGIARTGYEVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRD
                     EFEMGRELLVQVRKRQLKAKIVKKNQIDK"
     regulatory      complement(23567..23664)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            complement(23651..24175)
                     /locus_tag="O6Y56_000026"
     CDS             complement(23651..24175)
                     /locus_tag="O6Y56_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HDB5573331.1"
                     /translation="MNHDKSPIILIGFMGTGKSTIGKYVADEQHLSFIDIDSYIEEKY
                     KLTIPEIFSKHGEQYFRNLEFTCLQECINTADIIATGGGIIESEEAFNFLKNQKNIIW
                     LDCNIDIIYSRINDDPHRPNANNKTITQLNDLYCSRILRYNEIAFKKFDSHLLSISEI
                     YYELLNLIKASDQY"
     gene            complement(24165..24311)
                     /locus_tag="O6Y56_000027"
     CDS             complement(24165..24311)
                     /locus_tag="O6Y56_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573332.1"
                     /translation="MMLTAIYFSIFTFYISQYSLKLKTLYNIETDYNYKIVLLLKEGK
                     THES"
     gene            complement(24408..24905)
                     /locus_tag="O6Y56_000028"
     CDS             complement(24408..24905)
                     /locus_tag="O6Y56_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500150.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDB5573333.1"
                     /translation="MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVI
                     SITLLIVPDLIRLSKTFLIESRELTTVDFEFFSRDILEDFKGVDRNNIENREQRIILH
                     KGEEMIEYKLINNKIIKVVNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQT
                     KTIYV"
     gene            complement(24823..25122)
                     /locus_tag="O6Y56_000029"
     CDS             complement(24823..25122)
                     /locus_tag="O6Y56_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000844410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComGE"
                     /protein_id="HDB5573334.1"
                     /translation="MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQ
                     TIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQQICAISKNTTSYQKTCIQY"
     gene            complement(25109..25555)
                     /locus_tag="O6Y56_000030"
     CDS             complement(25109..25555)
                     /locus_tag="O6Y56_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HDB5573335.1"
                     /translation="MEKQLQIRKQSAFTMIEMLVVMMLISIFLLLTMTSKGLSNLRVI
                     DDEANIISLITELNYIKSQAIANQGYINVRFYENSDTIKVIENNKIRFLKLKVGKIIN
                     VAKVDIIAFDKKGNINKFGSITIDNNNSIYRIIFHIEKGRIRYEKL"
     gene            complement(25533..25844)
                     /locus_tag="O6Y56_000031"
     CDS             complement(25533..25844)
                     /locus_tag="O6Y56_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDB5573336.1"
                     /translation="MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQST
                     GCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFIKEAQKTCKSGETITISNGEAVA
                     N"
     gene            complement(25858..26928)
                     /locus_tag="O6Y56_000032"
     CDS             complement(25858..26928)
                     /locus_tag="O6Y56_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000776424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDB5573337.1"
                     /translation="MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSF
                     QFLNLQMAYKNKQLGTTILSEISNGAPCNQILSLIGYSDTIVMQVYLAERFGNIIDVL
                     EETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
                     SFQKTLSFFITSLPTIIVVMLIMVSILAIIMKLFYNKLNMLNKINFVMKLPLISGYFQ
                     LFKTYFVTNELVLFYKNGITLQSIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQIL
                     EKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIKQTQFLQPILFLILG
                     LFIVAIYLVIMLPMFQMMQSIK"
     gene            complement(26900..27874)
                     /locus_tag="O6Y56_000033"
     CDS             complement(26900..27874)
                     /locus_tag="O6Y56_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HDB5573338.1"
                     /translation="MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQ
                     IGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYHFNKIYFLRISTLPLSLGQESCVI
                     RIVPQFFQQQKSTYKFNDFKHLMNKKQELLLFSGPTGSGKSTLMYQMVSYANKALNLN
                     VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVI
                     QASLSGHLVLTTLHATDCKGAILRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLV
                     CEILSQQQLRYFFSHNHSLPSSFKNLEDKLDDMTKAGVICETTMDKYI"
     gene            complement(27926..28549)
                     /locus_tag="O6Y56_000034"
     CDS             complement(27926..28549)
                     /locus_tag="O6Y56_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDB5573339.1"
                     /translation="MRISSLTLGLVDTNTYFIENDKAVILIDPSGESEKIIKKLNQIN
                     KPLKAILLTHAHFDHIGAVDDIVDRFDVPVYMHEAEFDFLKDPVKNGADKFKQYGLPI
                     ITSKVTPEKLNEGSTEIEGFKFNVLHTPGHSPGSLTYVFDEFAVVGDTLFNNGIGRTD
                     LYKGDYETLVDSIQDKIFELEGDLPLFPGHGPYTTVDDEQLNPFLHG"
     gene            complement(28546..28875)
                     /locus_tag="O6Y56_000035"
     CDS             complement(28546..28875)
                     /locus_tag="O6Y56_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MTH1187 family thiamine-binding protein"
                     /protein_id="HDB5573340.1"
                     /translation="MAIVDVVVIPVGTEGPSVSKYIADIQKKLQEYKAMGKIDFQLTP
                     MNTLIEGELSDVLEVVQVIHELPFDKGLSRVCTNIRIDDRRDKSRKMNDKLTSVQKHL
                     ENSGENL"
     gene            complement(28875..29861)
                     /locus_tag="O6Y56_000036"
     CDS             complement(28875..29861)
                     /locus_tag="O6Y56_000036"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family glucokinase"
                     /protein_id="HDB5573341.1"
                     /translation="MTKIILAADVGGTTCKLGIFTPELEQLHKWSIHTDTSDSTGYTL
                     LKGIYDSFVEKVNENNYNFSNVLGVGIGVPGPVDFEKGTVNGAVNLYWPEKVNVREIF
                     EQFVDCPVYVDNDANIAALGEKHKGAGEGADDVVAITLGTGLGGGIISNGEIVHGHNG
                     SGAEIGHFRADFDQRFKCNCGRSGCIETVASATGVVNLVNFYYPKLTFRSSILELIKE
                     NKVTAKAVFDAAKAGDQFCIFITEKVANYIGYLCSIISVTSNPKYIVLGGGMSTAGPI
                     LIENIKTEYHNLTFTPAQFETEIVQAKLGNDAGITGAAGLIKTYVLDKEGVK"
     gene            complement(29858..30061)
                     /locus_tag="O6Y56_000037"
     CDS             complement(29858..30061)
                     /locus_tag="O6Y56_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgQ family protein"
                     /protein_id="HDB5573342.1"
                     /translation="MSRKINNFYDVQQLLKSYGFLIYFKNPEDMYEMIQQEISSLYQY
                     ELLSKEEYLKCTLIINQRRNEQK"
     gene            complement(30042..31505)
                     /locus_tag="O6Y56_000038"
     CDS             complement(30042..31505)
                     /locus_tag="O6Y56_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001652331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HDB5573343.1"
                     /translation="MNIDKQFWKTIYYWIRYLNFDIVSREKDDQEIWLAHKRKKQVVI
                     FKQHIKSTQEIRFDKAKVLEHKDEIANFISFEPQSFEFYYFTESEFSEEQLNEVSPIR
                     IKFNVIRHTKDLIKHMPNIFLARLISEDNDKKTYMFYKRKVLTDNFLDKYMQKFSPAT
                     YTIIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHI
                     LMNMLSLFIFGKIVEAIIGSWRMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLI
                     GSIFAMMYVSKTFNKKMLGQLLISLVILVGVSLFMSNINIVAHIGGFIGGLLITLIGY
                     YYKVNRNIFWILLIGMLVIFIALQIRIFTIKEDNIYNKLIKDDMTSGNYDNAQNIVKQ
                     TINKNYADDQTYYLSGMIMATINSKSEGMTEWERGLRMFPKSGLLNFELAIANRSLND
                     DEKALKYVRKALNADPKNTDYINLEKELTKSNESKNK"
     gene            complement(31517..32056)
                     /locus_tag="O6Y56_000039"
     CDS             complement(31517..32056)
                     /locus_tag="O6Y56_000039"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDB5573344.1"
                     /translation="MTKNEIRKYILHKMKNFNKAEKRKADTWLRNQFFATEEYKEANA
                     IALVLSFNHEVDTFSIIEQALMDHKRIFVPKMDYLNHQMTFKEIFNLKDIDVDNKGIY
                     YPTSKGETTNNLDLIVVPGVGFQNDGYRIGYGGGYYDRFLANYQTKTISLLYDFQITS
                     FEPESFDRPVDKLIIYQSA"
     gene            complement(32265..32414)
                     /gene="rpmG"
                     /locus_tag="O6Y56_000040"
     CDS             complement(32265..32414)
                     /gene="rpmG"
                     /locus_tag="O6Y56_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDB5573345.1"
                     /translation="MRVNVTLACTECGDRNYITTKNKRNNPERVEMKKFCSRENKQTL
                     HRETK"
     gene            complement(32527..34602)
                     /locus_tag="O6Y56_000041"
     CDS             complement(32527..34602)
                     /locus_tag="O6Y56_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDB5573346.1"
                     /translation="MLKRLKEKSNDEIVQNTINKRINFIFGVIVFIFAVLVLRLGYLQ
                     IAQGSHYKQIIKNDENITVNESVPRGRILDRNGKVLVDNASKMAITYTRGRKTTQSEM
                     LDTAEKLSKLIKMDTKKITERDKKDFWIQLHPKKAKAMMTKEQAMLADGSIKQDQYDK
                     QLLSKIGKSQLDELSSKDLQVLAIFREMNAGTVLDPQMIKNEDVSEKEYAAVSQQLSK
                     LPGVNTSMDWDRKYPYGDTLRGIFGDVSTPAEGIPKELTEHYLSKGYSRNDRVGKSYL
                     EYQYEDVLRGKKKEMKYTTDKSGKVTSSEVLNPGARGQDLKLTIDIDLQKEVESLLDK
                     QIKKLRSQGAKDMDNAMMVVQNPKNGDILALAGKQINKSGKMTDYDIGTFTSQFAVGS
                     SVKGGTLLAGYQNKAIKVGETMVDEPLHFQGGLTKRSYFNKNGHVSINDKQALMHSSN
                     VYMFKTALKLAGDPYYSGMALPSDISSPAQKLRRGLNQVGLGVKTGIDLPNETRGQIE
                     PLTNNPGNYLDLSIGQYDTYTPLQLSQYVSTIANDGYRIQPHIGLTIHESTNKDEVGP
                     LKKKINGTVLNKVNNTEKEIKQIQEGFKMAFNDKDGTGYVSFKDTVVPTAGKTGTAEV
                     FQNGEPRVNSTYIGYAPIDDPKLAFSIVYTNQPVPPPWLTGGDLGRDVINYYFKQLGK
                     DDKNKDKDK"
     gene            complement(34723..35322)
                     /locus_tag="O6Y56_000042"
     CDS             complement(34723..35322)
                     /locus_tag="O6Y56_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HDB5573347.1"
                     /translation="MAFELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVE
                     GTDLESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEKI
                     KEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNGQLEIVTTPNQDNPLTEGKTPILGL
                     DVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELYNATK"
     gene            complement(35598..36008)
                     /locus_tag="O6Y56_000043"
     CDS             complement(35598..36008)
                     /locus_tag="O6Y56_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HDB5573348.1"
                     /translation="MNTNDAIKILKENGLKYTDKRKDMLDIFVEEDKYINAKYIQQVM
                     DENYPGISFDTIYRNLHLFKDLGIIENTELDGEMKFRIACTNHHHHHFICEKCGDTKV
                     IDYCPIDQIKLSLPGVNIHKHKLEVYGVCESCQD"
     gene            complement(35995..36858)
                     /locus_tag="O6Y56_000044"
     CDS             complement(35995..36858)
                     /locus_tag="O6Y56_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDB5573349.1"
                     /translation="MIDALLNFDFMRYSLISGILIGFIAPLIGAFIVVRRLSLIADAL
                     SHVTLGGISFGMFLLTIMPTLVFINPMWFGILFAIVGALLIEKLRTSYTAYQEIAIPI
                     IMSAGIALSAIFISLADGFNQEIVGLLFGSISAVNISDLTTIIVIAIIVVLFITLFYK
                     ELFILSFDEEYSKVIGIPKWIQFLFIVIVAMVISASMRVVGILLVSALITLPIAISMR
                     ITKSFKQLILLSVFLGELSVILGLVLAFYMDISPGGVIVVLLVILLMITMAYQKMRMK
                     FKKGANINEYK"
     gene            complement(36900..37685)
                     /locus_tag="O6Y56_000045"
     CDS             complement(36900..37685)
                     /locus_tag="O6Y56_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDB5573350.1"
                     /translation="MRGENTMTPVFELKNVNYYYDHKKVLENINIKINKGEFLAIVGP
                     NGAGKSTLLKLILGLLPLQSGEIFVEGIDFKNKKTSIKLSYVSQKANAFNSGFPASVK
                     EVVLSGLTKTKRLFQTFNSKDNEKVIKVLERLNISDLIHKNITELSGGQQQRVMIARA
                     LISEPAVLVLDEPTNGIDAKHVSEFYNTLDQLKQEGITIILVTHDIGVVADTATEVAC
                     LNKHLHFHGTTDEFKSLDEVEISKIYGHPVRFVDHQHNRECCN"
     gene            complement(37811..38701)
                     /locus_tag="O6Y56_000046"
     CDS             complement(37811..38701)
                     /locus_tag="O6Y56_000046"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HDB5573351.1"
                     /translation="MLLGSHVSMSGKKMLEGSAIEAHEYGETTFMIYTGAPQNTRRKS
                     IEDLNITKGHEVMEKYGLSNIVVHAPYIINIANTTKPETFNLGVDFLQQEIERTQAIG
                     AKDIVLHPGAHVGAGVDAGINKIIEGLNEVLTNDNNVRIALETMAGKGTEIGRSFEEL
                     ARIIDGVHNNERLSVCFDTCHTHDAGYNVKEDFDGVLNEFDKIIGVDRIKVVHVNDSK
                     NDRGAQKDRHENIGFGYIGFDALNYIVHHDCFKDIPKILETPYVGEDKKNKKPPYKLE
                     IEMLKQQQFDPELKNKVMQQ"
     gene            complement(38711..40057)
                     /locus_tag="O6Y56_000047"
     CDS             complement(38711..40057)
                     /locus_tag="O6Y56_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDB5573352.1"
                     /translation="MAKHPFEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNL
                     IGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGV
                     SVKVFIGGTDIEKDRQRCNAQPQLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMI
                     DLGLIEDVDYIAARLEDNANIAVFSATIPQQLQPFLNKYLSHPEYVAVDSKKQNKKNI
                     EFFLIPTKGAAKVEKTLNLIDILNPYLCIIFCNSRDNANDLARSLNEAGIKVGMIHGG
                     LTPRERKQQMKRIRNLEFQYVIASDLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRT
                     GRGNYKGVAITLYSPDEEHNISLIEDRGFVFNTVDIKDGELKEVKAHNQRQARMRKDD
                     HLTNQVKNKVRSKIKNKVKPGYKKKFKQEVEKMKRQERKQFSKQQNRQKRKQNKKG"
     gene            complement(40171..41271)
                     /locus_tag="O6Y56_000048"
     CDS             complement(40171..41271)
                     /locus_tag="O6Y56_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDB5573353.1"
                     /translation="MKIADLMTLLDHHVPFRTAESWDNVGLLIGDEDVAVTGVLTALD
                     CTLEVVNEAIEKGYNTIISHHPLIFKGVTSLKANGYGLIIRKLIQHDINLIAMHTNLD
                     VNPHGVNMMLAKAMGLKNISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGN
                     YEYCFFESEGRGQFKPVGEANPTIGQIDKIEYVDEVKIEFMIDACQKSRAEQLIKQYH
                     PYETPVFDFIEIKQTSLYGLGVMAEVDNQMTLEDFAADIKSKLNIPSVRFVGVSNQKI
                     KRIAIIGGSGIGYEYQAVQQGADVFVTGDIKHHDALDAKIHGVNLIDINHYSEYVMKE
                     GLKTLLMNWFNTEKINIDVEASTINTDPFQYI"
     gene            complement(41274..41951)
                     /locus_tag="O6Y56_000049"
     CDS             complement(41274..41951)
                     /locus_tag="O6Y56_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenine-N(1))-methyltransferase"
                     /protein_id="HDB5573354.1"
                     /translation="MISLNNRLTTVSRFLKQGTIADIGSDHAYLPIYAIQNHLCDCGI
                     AGEVIQGPFQAAVKNVAANQLVERIDVRLGDGLSVIHPEDVIDNITICGMGGPLIAKI
                     LKDGQDKLSQHPRLILQSNIQTENLRQTLQQLNYEIIDEIIMEEKGHIYEIVVAEYST
                     QLIELSSDELKFGPKLLNNKNEYFIKKWQRELEALYHIKSKLNTEQHHQRLAQINDEI
                     AVIERVL"
     gene            complement(42082..43188)
                     /gene="rpoD"
                     /locus_tag="O6Y56_000050"
     CDS             complement(42082..43188)
                     /gene="rpoD"
                     /locus_tag="O6Y56_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDB5573355.1"
                     /translation="MSDNTVKIKKQTIDPTLTLEDVKKQLIEKGKKEGHLSHEEIAEK
                     LQNFDIDSDQMDDFFDQLNDNDISLVNEKDSSDTDEKLNPSDLSAPPGVKINDPVRMY
                     LKEIGRVNLLSAQEEIELAKRIEQGDEVAKSRLAEANLRLVVSIAKRYVGRGMLFLDL
                     IQEGNMGLIKAVEKFDFNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINK
                     LIRVQRQLLQDLGRDPAPEEIGEEMDLPAEKVREILKIAQEPVSLETPIGEEDDSHLG
                     DFIEDQEAQSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGK
                     VFGVTRERIRQIEAKALRKLRHPSRSKRLKDFMD"
     gene            complement(43412..45211)
                     /locus_tag="O6Y56_000051"
     CDS             complement(43412..45211)
                     /locus_tag="O6Y56_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDB5573356.1"
                     /translation="MRIDQSIINEIKDKTDILDLVSEYVKLEKRGRNYIGLCPFHDEK
                     TPSFTVSEDKQICHCFGCKKGGNVFQFTQEIKDISFVEAVKELGDRVNVAVDIEATQS
                     NSNVQIASDDLQMIEMHELIQEFYYYALTKTVEGEQALTYLQERGFTDALIKERGIGF
                     APDSSHFCHDFLQKKGYDIELAYEAGLLSRNEENFSYYDRFRNRIMFPLKNAQGRIVG
                     YSGRTYTGQEPKYLNSPETPIFQKRKLLYNLDKARKSIRKLDEIVLLEGFMDVIKSDT
                     AGLKNVVATMGTQLSDEHITFIRKLTSNITLMFDGDFAGSEATLKTGQHLLQQGLNVF
                     VIQLPSGMDPDEYIGKYGNDAFTAFVKNDKKSFAHYKVSILKDEIAHNDLSYERYLKE
                     LSHDISLMKSSILQQKAINDVAPFFNVSPEQLANEIQFNQAPASYYPEDEYGGYIEPE
                     PIGMAQFDNLSRQEKAERSFLKHLMRDKDTFLNYYESVDKDNFTNQHFKYVFEVLHDF
                     YAENDQYNISDAVQYVNSNELRETLISLEQYSLNDEPYENEIDDYVNIINENGQETIE
                     SLNHKLREATRIGDVELQKYYLQQIVAKNKERM"
     gene            complement(45272..46090)
                     /locus_tag="O6Y56_000052"
     CDS             complement(45272..46090)
                     /locus_tag="O6Y56_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HDB5573357.1"
                     /translation="MEKIKIIVASDSIGETAELVARAGISQFNPKQCKNELLRYPYIE
                     SFEDVDEVIQVAKDTNAIIVYTLIKPEMKQYMSEKVAEFQLKSVDIMGPLMDLLSASV
                     EEKPYNEPGIVHRLDDAYFKKIDAIEFAVKYDDGKDPKGLPKADIVLLGISRTSKTPL
                     SQYLAHKSYKVMNVPIVPEVTPPDGLYDIDPKKCIALKISEEKLNRIRKERLKQLGLG
                     DTARYATEARIQEELNYFEEIVSEIGCPVIDVSQKAIEETANDIIHYIEQNKSK"
     gene            complement(46101..46724)
                     /locus_tag="O6Y56_000053"
     CDS             complement(46101..46724)
                     /locus_tag="O6Y56_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001797828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDB5573358.1"
                     /translation="MELSQRQERIIEIVKTQGPITGEQIADKLNLTRATLRPDLAILT
                     MSGFLEARPRVGYYYSGKSKGKFFNEKLRQFEVKDYMSQPVVLRENTTVYDAICTIFL
                     EDVSTLFIINEDNDFVGVCSRKDLLRASMIGADIHTVPISVNMTRMPNVTYLEESELV
                     IYAADRMIEKEIDSIPIVRKKDNQKYEVIGRISKTTIAKLLVALYKE"
     gene            47059..48450
                     /locus_tag="O6Y56_000054"
     CDS             47059..48450
                     /locus_tag="O6Y56_000054"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HDB5573359.1"
                     /translation="MAKDMDTIVSLAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNN
                     VKKAWWQKFITQSPFNVGIDAAILMNPKVWEASGHLNNFNDPMIDNKDSKIRYRADKL
                     IEDYMQDVKGDENFIADGLSFEQMKKIIDDEGIVCPVSKTANWTEIRQFNLMFKTFQG
                     VTEDSTNEIFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRT
                     REFEQMELEFFCKPGEEIEWQNYWKTFASDWLTSLNMSSENMRLRDHDEDELSHYSNA
                     TTDIEYKFPFGWGELWGIASRTDFDLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLG
                     ADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPALAPYKAAILPLSKKLSGEAIKIFEQ
                     LSSKFSIDFDESQSIGKRYRRQDEIGTPYCVTFDFDSLEDNQVTVRDRDSMEQVRMPI
                     SELEAFLTEKTKF"
     gene            complement(48601..49347)
                     /gene="recO"
                     /locus_tag="O6Y56_000055"
     CDS             complement(48601..49347)
                     /gene="recO"
                     /locus_tag="O6Y56_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HDB5573360.1"
                     /translation="MRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGL
                     QAQTQLFVYGLFIYNQWRGMGTLNSVDVISQHYKLQMDLYVSSYASLVAETIERSMDE
                     GDIAPYNYQLLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFNRCAVSGNDTQAD
                     LIGYSFKFDGAISRQEASKDVHAVILSNKTLYLLDVLQKLPIDKMNSLNIHQEIIDEM
                     SDIILMLYREYAGMFFKSQKLINQLKRLEQ"
     gene            complement(49375..50274)
                     /gene="era"
                     /locus_tag="O6Y56_000056"
     CDS             complement(49375..50274)
                     /gene="era"
                     /locus_tag="O6Y56_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000134760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDB5573361.1"
                     /translation="MTEHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNK
                     IQGVMTRDDAQIIFIDTPGIHKPKHKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRG
                     DEYIIEMLKNVKTPVFLVLNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVD
                     HFIDVLKTYLPEGPKYYPDDQISDHPEQFVVGEIIREKILHLTSEEIPHAIGVNVDRM
                     VKESEDRVHIEATIYVERDSQKGIVIGKGGKKLKEVGKRARRDIEMLLGSKVYLELWV
                     KVQRDWRNKVNFIRQIGYVEDQD"
     gene            complement(50275..50679)
                     /gene="cdd"
                     /locus_tag="O6Y56_000057"
     CDS             complement(50275..50679)
                     /gene="cdd"
                     /locus_tag="O6Y56_000057"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HDB5573362.1"
                     /translation="MSYQPHYFQEVRKAQQESYSPYSHFKVGAYLKTKDGRTFYGTNV
                     ENASYPLSICAERASLVSAISQGYRPGDFESITVTVDADKPSSPCGACRQVLKELCDD
                     DMPVYMTNHKGDMVMMTVAELLPFGFSGKDLE"
     gene            complement(50690..51034)
                     /locus_tag="O6Y56_000058"
     CDS             complement(50690..51034)
                     /locus_tag="O6Y56_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDB5573363.1"
                     /translation="MKRFKYALDGLKILIQKDYKFLLHVFAMIVAIVFGLVLNINRIE
                     WIFILIAIALVLTVEALNTAIEYVVDLVTAEYHDLAKYAKDIAAFSVLIVSILAFIIG
                     LIVFLPHFIALF"
     gene            complement(51037..51504)
                     /gene="ybeY"
                     /locus_tag="O6Y56_000059"
     CDS             complement(51037..51504)
                     /gene="ybeY"
                     /locus_tag="O6Y56_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDB5573364.1"
                     /translation="MFTIDFSDHTGLVKDAWYKQIEDLLEFAKKEEHIEDDAELSVTF
                     VDKQEIQEINRTYRDKDKVTDVISFALEEDEPDIDYSDLDIPRVLGDIIICTDVAQEQ
                     ANNYGHSFERELGFLALHGFLHLLGYDHMTETDEKEMFGRQDTILNAYGLTRD"
     gene            complement(51505..52452)
                     /locus_tag="O6Y56_000060"
     CDS             complement(51505..52452)
                     /locus_tag="O6Y56_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HDB5573365.1"
                     /translation="MPGIIQIDDMNQSQALIGNNDEHLKAIEESFDVVIHARGQEVAV
                     KGTKIENVEKAESVLINLLKVIDLGNNITIKDVEAAIKMAHNNTIQHLLDLYDEEITK
                     DAFGKTIRAKTMGQRIYVNAMKNNDLVFGIGPAGTGKTFLAVVYAAKQLRKGAVKRIV
                     LTRPAVEAGESLGFLPGDLKEKVDPYLRPLYDGLYTVLGREQTERFIERGIIEIAPLA
                     YMRGRTLEDAFVILDEAQNTTHAQMKMFLTRLGFGSKMVVTGDQTQIDLPKGVKSGLK
                     EAVSRLHNVKGISILKLDQSDVVRHPLVSKIIEHYEGEN"
     gene            complement(52756..53454)
                     /locus_tag="O6Y56_000061"
     CDS             complement(52756..53454)
                     /locus_tag="O6Y56_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HDB5573366.1"
                     /translation="MSVGILIFVISVIISIITTMRENSHKDRQNQKPPQKTSTDNEPK
                     KGGFFEEIERTFKEISEELNEEEKKSSKRKYDDTLPPLFDELPKEEPKSKPVVEPMAP
                     KKQQETKPMTEKPITVPKVEPVEQKHRPSRQDNSDEIRRQLEKSLRDDIKTIRTDIDR
                     EKEKQIAKMEKRARDIIEDKYLSERTKRLKLKQLLNSQNVEKDLTKSAFQFDKDEVIN
                     GMIWSEILAKPKQL"
     gene            complement(53471..54460)
                     /gene="floA"
                     /locus_tag="O6Y56_000062"
     CDS             complement(53471..54460)
                     /gene="floA"
                     /locus_tag="O6Y56_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500186.1"
                     /note="flotillin-like protein involved in membrane lipid
                     rafts; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin-like protein FloA"
                     /protein_id="HDB5573367.1"
                     /translation="MFSLSFIVIAVIIVVALLILFSFVPIGLWISALAAGVHVGIGTL
                     VGMRLRRVSPRKVIAPLIKAHKAGLALTTNQLESHYLAGGNVDRVVDANIAAQRADID
                     LPFERAAAIDLAGRDVLEAVQMSVNPKVIETPFIAGVAMNGIEVKAKARITVRANIAR
                     LVGGAGEETIIARVGEGIVSTIGSSKHHTEVLENPDNISKTVLSKGLDSGTAFEILSI
                     DIADVDISKNIGADLQTEQALADKNIAQAKAEERRAMAVATEQEMKARVQEMHAKVVE
                     AESEVPLAMAEALRSGNISVKDYYNLKNIEADTGMRNAINKRTDQSDDESPEH"
     gene            complement(54478..55161)
                     /locus_tag="O6Y56_000063"
     CDS             complement(54478..55161)
                     /locus_tag="O6Y56_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HDB5573368.1"
                     /translation="MTTILESTAGDTWVEQVSNIIVQPIFTLILTCLTFLGFVYQLYS
                     KKINAAGIIATLSLLILFLGFLIQGNVNMHSILIFSIGVILVVIELFVVGAVIGIIGM
                     ILITISITTLGDNLLFMLANVIVALILTIVEWVILVKIFNRKIPFLDKVILKDSTNSE
                     SGYNSHDNRSHLVGKTAQTVTDLRPAGIIFCENERIDAVSDGNFILRNKTVKILEVEG
                     TRVVVREVD"
     gene            complement(55405..55581)
                     /locus_tag="O6Y56_000064"
     CDS             complement(55405..55581)
                     /locus_tag="O6Y56_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016998564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDB5573369.1"
                     /translation="MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVK
                     RKKKSEAARKRKFK"
     gene            complement(55874..57220)
                     /gene="mtaB"
                     /locus_tag="O6Y56_000065"
     CDS             complement(55874..57220)
                     /gene="mtaB"
                     /locus_tag="O6Y56_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HDB5573370.1"
                     /translation="MSTVAFHTLGCKVNHYETEAIWQLFKEANYERVDFEANADVFVI
                     NTCTVTNTGDKKSRQIIRRAIRQNPDAVICVTGCYAQTSSAEIMEIPGVDVVVGTQDR
                     HKLLGYIDEFRKERQPINGVGNIMKNRKYEELDVPYFTDRTRASLKIQEGCNNFCTFC
                     IIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKDYNLAQLLRDL
                     ETINGLERIRISSIEASQLTDEVIDVLERSTKVVRHLHIPLQSGSDTVLKRMRRKYTM
                     DRFSERLTKLHKALPDLAVTSDVIVGFPGETEAEFQETYDFIVKHKFSELHVFPYSPR
                     IGTPAARMDDQIDEEIKNERVHKLITLSNQLGKLYASKFDQDVLEVIPEEQGDTEGTL
                     VGYADNYMKVQFEGDESLIGQIVKVKITQANYPLNEGQAIKVVDFATNKSDREVLV"
     gene            complement(57227..57979)
                     /locus_tag="O6Y56_000066"
     CDS             complement(57227..57979)
                     /locus_tag="O6Y56_000066"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDB5573371.1"
                     /translation="MQRYFIDQNADVSQRFFITKKEDIHHITNVMRYDVGSKIILTFN
                     DQTVYLCEIADITSDKIAVDLKEKQNINTELPVDVTICSGLIKADKYEWLLQKATELG
                     ASSFIAVSMERSIVKLNEAKVAKKIERWQKIIKEAAEQSYRLVIPSIQFESNLKLICD
                     TIDNYDYILIAYEEEAKDGELSNFKQTLQQFKAQDKVLMIFGPEGGLSENEISLFSNT
                     STVVGLGPRILRAETAPLYALSAISYEKELMG"
     gene            complement(57981..58919)
                     /gene="prmA"
                     /locus_tag="O6Y56_000067"
     CDS             complement(57981..58919)
                     /gene="prmA"
                     /locus_tag="O6Y56_000067"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDB5573372.1"
                     /translation="MNWTELSIIINHEAVELATNILENHGSNGVVIEDSDDLINQPED
                     KYGEIYALKKEDYPDKGVRLKAYFNEMTYDDKLRQRIKDELLNLDELDQHNVQFSEQI
                     IAETDWENEWKNYFHPFRASKKFTIVPSWETYAKEADEELCIELDPGMAFGTGDHPTT
                     SMCLKAIETYVLPQHSVIDVGTGSGILSIASHLIGVKRIKALDIDEMAVSVAKENFRR
                     NHCETLIEAVPGNLLKDETEKFDIVIANILAHIIDEMIEDAYNTLNEGGYFITSGIIK
                     EKYEGIQSHMERVGFKIISEQHDNGWVCLVGQKVSE"
     gene            complement(58923..60062)
                     /gene="dnaJ"
                     /locus_tag="O6Y56_000068"
     CDS             complement(58923..60062)
                     /gene="dnaJ"
                     /locus_tag="O6Y56_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDB5573373.1"
                     /translation="MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADE
                     KFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFS
                     SFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPG
                     TSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENKT
                     VKLEVKVPEGVDNEQQIRLAGEGSPGVNGGPAGDLYVVFRVKPSETFKRDGDDIYYKL
                     NVSFPQAALGDEIKIPTLNNEVMLTIPAGTQTGKQFRLKEKGIKNVHGYGYGDLYVDI
                     KVVTPTKLTDRQKELMKEFAQLNGEEINEQPSNFKDRAKRFFKGE"
     gene            complement(60198..62030)
                     /gene="dnaK"
                     /locus_tag="O6Y56_000069"
     CDS             complement(60198..62030)
                     /gene="dnaK"
                     /locus_tag="O6Y56_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDB5573374.1"
                     /translation="MSKIIGIDLGTTNSCVTVLEGDEPKVIQNPEGSRTTPSVVAFKN
                     GETQVGEVAKRQAITNPNTVQSIKRHMGTDYKVDIEGKSYTPQEISAMILQNLKNTAE
                     SYLGEKVDKAVITVPAYFNDAERQATKDAGKIAGLEVERIINEPTAAALAYGLDKTDK
                     DEKVLVFDLGGGTFDVSILELGDGVFEVLSTAGDNKLGGDDFDQVIIDYLVAEFKKEN
                     GVDLSQDKMALQRLKDAAEKAKKDLSGVSQTQISLPFISAGENGPLHLEVNLTRSKFE
                     ELSDSLIRRTMEPTRQAMKDAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKG
                     VNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSK
                     SQIYSTAVDNQPSVDVHVLQGERPMAADNKTLGRFQLTDIPPAERGKPQIEVTFDIDK
                     NGIVNVTAKDLGTNKEQRITIQSSSSLSDEEIDRMVKDAEVNAEADKKRREEVDLRNE
                     ADSLVFQVEKTLTDLGENIGEEDKKSAEEKKDALKTALEGQDIEDIKSKKEELEKVIQ
                     ELSAKVYEQAAQQQQQAQGANAGQNNDSTVEDAEFKEVKDDDKK"
     gene            complement(62099..62725)
                     /gene="grpE"
                     /locus_tag="O6Y56_000070"
     CDS             complement(62099..62725)
                     /gene="grpE"
                     /locus_tag="O6Y56_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDB5573375.1"
                     /translation="MTNKDESVEKNTESTVEETNVKQNIDDSVEQTEESKGHLQDEAI
                     EETSDENVIEEIDPKDQKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQ
                     AQRVLTDILPAIDNIERALQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEG
                     EAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVNQ"
     gene            complement(62757..63734)
                     /gene="hrcA"
                     /locus_tag="O6Y56_000071"
     CDS             complement(62757..63734)
                     /gene="hrcA"
                     /locus_tag="O6Y56_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcription repressor HrcA"
                     /protein_id="HDB5573376.1"
                     /translation="MITDRQLSILNAIVEDYVDFGQPVGSKTLIERHNLNVSPATIRN
                     EMKQLEDLNYIEKTHSSSGRSPSQLGFRYYVNRLLEQTSHQKTNKLRRLNQLLVENQY
                     DVSSALTYFADELSNISQYTTLVVHPNHKQDIINNVHLIRANPNLVIMVIVFSSGHVE
                     HVHLASDIPFSNDKLNTISNFVTNKLTEFNQNLQDDIVSFVQSEQEEIFINKLLNTMN
                     NHISNQSNSIYMGGKVKLIDALNETNVSSIQPILQYIESNRIAELLQDISSPNINVKI
                     GNEIDDSLSDISIVTSQYHFDETLKGQIAVIGPTAMHYQNVIQLLNRIW"
     gene            complement(63834..64958)
                     /locus_tag="O6Y56_000072"
     CDS             complement(63834..64958)
                     /locus_tag="O6Y56_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDB5573377.1"
                     /translation="MTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMS
                     TAKYRNLKTMYVGGGTPTALSINQLERLLKAIRDTFTITGEYTFEANPDELTKEKVQL
                     LEKYGVNRISMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPK
                     QTIEDFEQSLDLALDMEIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLL
                     MSKIEQSPFHQYEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPV
                     NHYIKAINKENKAILVSNKPSLTERMEEEMFLGLRLNEGVSSRRFKKKFDQSIESVFG
                     QTINNLKEKKLIVEKNDAIALTNRGKVIGNEVFEAFLIND"
     gene            complement(65708..67531)
                     /gene="lepA"
                     /locus_tag="O6Y56_000073"
     CDS             complement(65708..67531)
                     /gene="lepA"
                     /locus_tag="O6Y56_000073"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDB5573378.1"
                     /translation="MDNEQRLKRRENIRNFSIIAHIDHGKSTLADRILENTKSVETRD
                     MQDQLLDSMDLERERGITIKLNAVRLKYEAKDGNTYTFHLIDTPGHVDFTYEVSRSLA
                     ACEGAILVVDAAQGIEAQTLANVYLALDNELELLPVINKIDLPAAEPERVKQEIEDMI
                     GLDQDDVVLASAKSNIGIEEILEKIVEVVPAPDGDPEAPLKALIFDSEYDPYRGVISS
                     IRIVDGVVKAGDKIRMMATGKEFEVTEVGINTPKQLPVDELTVGDVGYIIASIKNVDD
                     SRVGDTITLASRPASEPLQGYKKMNPMVYCGLFPIDNKNYNDLREALEKLQLNDASLE
                     FEPESSQALGFGYRTGFLGMLHMEIIQERIEREFGIELIATAPSVIYQCILRDGSEVT
                     VDNPAQMPDRDKIDKIFEPYVRATMMVPNDYVGAVMELCQRKRGQFINMDYLDDIRVN
                     IVYELPLAEVVFDFFDQLKSNTKGYASFDYEFIENKESNLVKMDILLNGDKVDALSFI
                     VHRDFAYERGKALVEKLKTLIPRQQFEVPVQAAIGQKIVARTNIKSMGKNVLAKCYGG
                     DISRKRKLLEKQKAGKAKMKAVGNVEIPQDAFLAVLKMDDE"
     gene            67877..68128
                     /locus_tag="O6Y56_000074"
     CDS             67877..68128
                     /locus_tag="O6Y56_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDB5573379.1"
                     /translation="MANIKSAIKRVKTTEKAEARNISQKSAMRTAVKNAKTAVSNNAD
                     NKNELVSLAVKLVDKAAQSNLIHSNKADRIKSQLMTANK"
     gene            complement(68173..>68726)
                     /gene="holA"
                     /locus_tag="O6Y56_000075"
     CDS             complement(68173..>68726)
                     /gene="holA"
                     /locus_tag="O6Y56_000075"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDB5573380.1"
                     /translation="WIQSKLNENFKDIKRDALDLFIELTGINFNIVSQEIEKLILFLG
                     DRPTINKQDVNQIINRSLEQNVFLLTEYIQKRKKEQAIHLVKDLITMKEEPIKLLALI
                     TSNYRLFYQCKILSQKGYSGQQIAKTIGVHPYRVKLALGQVRHYQLDELLNIIDACAE
                     TDYKLKSSYMDKQLILELFILSL"
BASE COUNT        21313 a        12747 c         9285 g        25381 t
ORIGIN      
        1 aatatatata tttattgtaa ctcaaactaa gctttgtcaa aaatatattg attgattttt
       61 caaagatatc gtataatgag gaaaatgaca taagcaaact tactcatgtt ttttataata
      121 ttcctttatg atgattgcta gttatatcgt ctcaagttaa aagttttata tcttatgtcg
      181 taattattaa tacaaaggtt attcatttgg aggcacacaa aatgcaaaat aaagttttaa
      241 gaattatcat tatcgttatg cttgtatcag ttgtattagc attgttatta acgagtatta
      301 ttccaatttt ataaactata tctcaactac ctatacaaaa tcatacaatt aaaaatccat
      361 ccgttataaa cgcatgtatt aataagttat cgtattgcaa cgattacttt caaacatggg
      421 tcatacggat ggattatttt ttaagctact tcactatgca ttttcaatga accaaattgc
      481 gatttgattt gtaaatattc ttctaattca tttaatattt gaataatact tgctctcgag
      541 ttaagcgctt tgtgcgttgt tggcaatggc agttcatcca atttcaaacg cgtctcatac
      601 aaattgtgta aacgcattgc tgtatagtca ttactattca catttagacc aatttctttc
      661 agcagtgacg caacatcatt taaaagtgga tctttatgac agatactttc gatgagcggt
      721 ttcattctca ttaacaattc cacttgctct tctcgcatat caaaataatg atagtatgaa
      781 ttttcgtttc taacaaaatg atttttaaca tctcggaacg cgatagactt cgccttttta
      841 atatttaaaa gtaacgcttc aaattcaatc gcaatggtat cttcatattt ttcacaaata
      901 taactatatt tactaaaaat atcagcaatt tgttgctcaa ttttacattt gtattcgtct
      961 agttgtttgt ctaaacttgg catcattaaa ttcattgtaa atgcaatgct tagtccaatt
     1021 aacagtaata atgtttcatt aacaattaaa tgtgcatcaa ttgattttgc attaaaaaca
     1081 tgaagtaata taacgcaact cgtaatgaca ccttcttgta cttttaatac gacagttaat
     1141 ggtataaata acaatacgat aataccgagt acaattggac tctgacctaa taaactaaat
     1201 attgctgaac ctaaaaacaa tactaaaaaa catgatacta atcttgaaat aatcgcttgt
     1261 agcgaatgta cttttgtatg tttaatacat aatacgacta atatggcgct tgaagcataa
     1321 ttatctaaac ctaacagctt actaataatt acacctaaag tcatacccac tgctgttttt
     1381 attgttctaa atccaatctt gtaaggattt aactttaaca tgggttagcg cctcttatct
     1441 ttcttcacaa tatttattga ataatgtttg taattgatta attacgttca tcacatcatg
     1501 accttcgatt tgatgtcttt caatcatttc tgtaatcttt ccatctttta ataatgcaaa
     1561 tgacggactt gaaggcgcat aaccttcgaa gtactcacgc gctctttgtg tcgcttcttt
     1621 atcttgtcca gcaaatactg tcactagacg atcaggtaat acgtcataat gtaaagcatg
     1681 tgatgctgct ggtcttgcga taccacctgc acaaccacat acagaattga tcataactag
     1741 tgttgtacca tcttgtttaa ggactttgtc aacatcttct gcagtagtta attgctcata
     1801 tcccgcagat tcaatttcat tccttgcttg ttctacaaca ccgttcatgt ataaatcgaa
     1861 attcatgtcc ataagttcaa tcacctatcc ctttatattt aaactatcct cattctacta
     1921 attaataaca tattgttcaa taaactaatc tgaatcacac ctatatttag acacaatttt
     1981 aacaatatac caaacattat tgtgcttaaa atcatggaaa ctaatttatt cccctgtttt
     2041 cattaatata tttcaagtat gatgtcttat tttgacttta ctgcaaaaat gcattcaacc
     2101 atgttgatta ttgttcttta tcttttttga atatattgca aatattttat tgccaaaaaa
     2161 taatacatcc atcgacaaga acaagataaa acaagttgtc gatagatgca tctatgttat
     2221 cactaatata tatttgtatt ttctaaagta tactgttcga tacgctgttt aatatgattc
     2281 ataaatttac ctgtttgtaa accatctaaa atacgatgat ctattgaaat acataaattt
     2341 accatacttc gaattgctat catatcatta attactactg gctttttaac gatggattct
     2401 acttgtaaaa tcgctgcttg aggatgattt ataatcccca ttgatgatac tgaaccaaat
     2461 gtaccagtat tattaactgt aaatgttcca ccttgcatat cttcagttgt caattgctta
     2521 ttacgcgctt ttgttgctaa agtattaatt tctctagcta tacctttgat tgacttttcg
     2581 tctgcatgct taatcacagg tacgtataat ttattttcat cagcaacagc aattgaaata
     2641 ttaatatctt tatgtaagac aatttcattt ccttgccagc tactatttaa taatggatat
     2701 gcttttaaag catctgctac agcttttaca aagaaagcaa agaaagttaa attatatcct
     2761 tctttatttt taaagttgtt tttataatgg tttctcgtat tcacaaggtt tgtagcatca
     2821 acctcaatca tcatccatgc atgtggaatc tccgttacac tattaaccat gttttgtgca
     2881 attgctttac gcacaccatt tactggtatt gtgctatttt cactattgcc ttcagatgat
     2941 tggttacttg atgtatctac tgaagttgat tgtgtttgaa cttgtttgtc agattgagct
     3001 gtggtaccac cattttcaat aactgacatt aaatctttct tagttacacg accttcaaat
     3061 ccactaccta caacttgtga taaatcaatg tcatgctctg aagcgagttt aaatacaaca
     3121 ggtgaatagc gaccattatt tcgtggttga ttttgtttag cagtagatgt ctgttccact
     3181 gttgcactag ctcttttagt agatttctga gtatcctcat ccacttttgc ttgtatctct
     3241 tcagttgttt catttgtctt ttcatcagca gtttcaattt tacagataat tgtatcaata
     3301 gctaccgtct gccccgcttc aactaaaatt tcagtaattg ttccagatat cgtggaaggg
     3361 acttcagctg tcactttatc tgtaataact tcacataatg gttcatattc atcaatatga
     3421 tcaccaacag aaactaacca ttgttcaatg gtaccttcat gaacactctc acctaactta
     3481 ggcattgtta tttccatgac tttccctccc tagaattctg ctaattcacg cattttattt
     3541 aagatttttt ctggattcat cataatttca ttttctaata caggagaaaa tggcatagat
     3601 ggtacatctg gagcagctaa acgcatgatt ggtgcatcta gttcaaacag acaatgttct
     3661 gcaataatcg ctgacacctc agacataata ctgccttcta aattatcttc agttacaagt
     3721 aaaactttac ctgtatgttt agcacgatca ataattgttt ctttatctaa tggataaaca
     3781 gttcgtaaat ctacgacttc aacattgata ccgtctgcag ctaaaatatc agcggcttgt
     3841 aaacaataat tgaccattaa tccataacaa aatactgtta aatcttcacc ttcacgttta
     3901 acatctgctt ttcctaaagg tacagtgtaa tattcttctg gcacttcttc ctttaagaat
     3961 ctatacgcct ttttatgttc aaagtataaa acaggatcat ttgattcaat tgaagataat
     4021 aatagacctt tagcatcata cggtgttgaa gggataacaa ttgttaaacc tggtgatgaa
     4081 gcaaatatac tttcaatact ttgtgaatga taaagtccac catgaacacc gccaccaaat
     4141 ggtgcacgaa tcgttaatgg gcattgccat tcattatttg aacgataacg cattttagcg
     4201 gcttcactaa taatttgatt tgttgcaggt aagataaaat ctgcaaactg aatctcagca
     4261 attggtcttt taccaaccat agctgcgcca atggctgttc cgacaatatt tgactcagct
     4321 aatggtgtat cgataactct gtcctcacca tattgttgtt gcagtccttg agtagtacca
     4381 aatacgccac cttttttacc aacatcttca ccaagaataa atacatcttt attttgttgt
     4441 aatgctaagt cttgcgcctg gcgaatcgcc tctaaataag ataatttagc cattagttaa
     4501 gactcccttc ttcgtacaca aatgcatagg cttcttcaac acttggatat ggcgcgtctt
     4561 cagcagcctt tgtcgcttta ttgataatgt ctttatgttc tgcttctatt tctgccaacc
     4621 aagcatcatc gataatgcca gctgaaagta actctttttt gaacttttcg ttgcagtctg
     4681 cttttttaag cgcttcacgc tcttcttttg tacgatattg gtcgtcatca tctgatgaat
     4741 gtgctgtcat acgagaagtt actgcttcaa tcaaagttga accttgacca gaaatagctc
     4801 gatctcttgc ttctttcatc gctttataca ttgctaaagg atcattacca tctacttgtt
     4861 caccatgtat accgtaacca agtgctctat cagataattt ttcagctgcg tattgtaatg
     4921 aatcaggtac tgaaattgca tatttattat ttataatgac acatacaaaa ggaagtttgt
     4981 gtacacccgc gaagtttaaa ccttcatgga agtcaccttg gtttgagctg ccttcaccaa
     5041 cagttgctgt tgcaattttc ttcttaccat ccatttttag agctaaagca gcaccaacag
     5101 catggggtat ttgagttgct accggtgaac tttgtgacaa aatattctta gctctactac
     5161 taaagtgtga tggcatttgt tttccaccag agttaacatc gtctttcttt ccaaacgctg
     5221 ataaaaacgt atcatacgct gagataccca tataagtaac gaaagctaga tctctataat
     5281 aaggcgcagt aatatcacct tcttctaatg cgtatgccat cccaatctga gttgcttctt
     5341 gtccttgacc acttacaaca aatggaattt tacctgcacg gttcaataac cacagtcttt
     5401 catctatttt tctacctaaa tccatccatt tatatattac ttttaggtct tcttcgctaa
     5461 ggcctaatga tttataatca atcatgttaa atcctcctat ttatacgtga atagctctac
     5521 tttctgcttt caatcctaat tccatcaaca cttcagagat ggaaggatgc gcgtgtgttg
     5581 ttagtcctaa ttctaatgcc gagccattca tgaactgtaa cagtgatgcc tcattaatca
     5641 attctgttac atgtggacca atcatattaa tacccacaat ttcttcagtt gattgatcaa
     5701 tcaccatttc gctataccct tcgtttgcgt catggctatc aatcactgct ttaccaattg
     5761 ctttaaatgg tactttaaaa cttttaactt tcattccctc tgcctttgct tgttcaatgt
     5821 ttaagccgat agaagcaatt tcaggttgtg aataaataca cttaggcatc atgttatagt
     5881 ttactgggat tgggttccct tcaaacatat gatcgacagc cacaactcct tcttttgatc
     5941 caacatgtgc caattgtaat tttccaatac aatcaccagc tgcataaata tgtttatctt
     6001 cagtttgttg aaattcgttc gttaaaatat gtcctgatgt tgaaagtttt attttagtgt
     6061 tgtttaaacc aatatctgat gtgttaggtt ttctaccaat cgatagcaac actttatcta
     6121 ctttaattat gtctgaagaa atttcaaatg taacaccatc ttcgttaaca tttatatcat
     6181 tttcagaaag ttttattccc tcatagaatt taacaccacg tgctgacaat gattttttta
     6241 atagttgtga agcttgttta ctttcagttg gtaaaattct ttcaccagct tctataactg
     6301 ttacgtcaac acctaaatct atcatcaatg atgcaaattc cattccgata acaccaccac
     6361 caataatacc aacacttgat ggtaacgtct ttaatgataa tatatcatcg ctagataaaa
     6421 ttttatcatg atcaaatgat aagaatggca actctgcagg cgaagaacca gttgcaatta
     6481 atacaaattg gttgggtaat aagtctgatt caccatcttc atattcgaca gaaattgtgc
     6541 cactttgagg tgaaaatata gatgtaccta gaatacgtcc cgtgccatta taaatgtcaa
     6601 tgtgattgtg ttgcattaaa tgctttacac cttgatacat ttgattaata atgtcttctt
     6661 ttcgtgccaa catattttca aaattaacat tagcatcttt gacatcaacg ccaaacattg
     6721 ctgcctgttt tactgtttga aatacttcag cagatttaag cagcgattta gtaggaatac
     6781 aacctttatg gagacaagta cctcctaata gttgtcgttc tactattgcc actttcttac
     6841 ctaattgaga cgcacgtatc gcagcaacat atcctgcagt acctccaccg agaacgacta
     6901 aatcatattg tttctctgac atgttcttac tcctaactaa tgatatatat ccattgaaaa
     6961 tttattaata catagttttc atgtccatta attacctatt ttacatgatt gtctatttag
     7021 tttgaatgca cataaataaa tccacaaatg agtattcaac acactttgga aattatctac
     7081 gtctttgatt gtgttgtatc atttctcttg cattttcacg agttaaatca gtaacacttg
     7141 cacctgaaat cattcgtgca atttcatcta ctttatcatc gccaattaac tcttgaactt
     7201 gtgttgttgt acgatcatct tttgatgatt tcgaaattaa taaatgatgg tcgctcatcg
     7261 atgcaacttg tggcaagtga gatatacaaa taacttgtat atattctgct atatctcgca
     7321 ttttctctgc cattttttgt gcggcttgtc cagatacacc tgagtcaacc tcatcgaata
     7381 aaattgcagt ttgacctctc gatttaacaa aaatactttt taacgctaac ataattctag
     7441 aaagttctcc acctgacgca attttattta aactttttaa tggttcccct ttattaggac
     7501 tgattaaaaa ttctacaaat tcgattccat caatattcgg ttcttctaat tttttaaatg
     7561 aaatctcaag gtttgcatct ttcatttgta agttttgaat ttccgataca atgtggtctc
     7621 ttaactccct agcaactata cgacgctgct tagataacgc ttgtccaacc tctataactt
     7681 gattatacaa tgcatttatt tcttctcgta actgcgatgt actttgttca tagttttcaa
     7741 ttttattgat ttcattatta agcttttctt gatatgcgat taattctgaa atatcttttc
     7801 catatttgcg ttttaaatta ttcagcaaat tcatacgaga ttcatactcg tttaacactt
     7861 gttcgtcgaa ttctgtatta gccatttcat catataactc atgttttgca tcttctaaaa
     7921 tgtaataaaa ttgatcaata tcttctttta atttgtcata tttgtttgga actatatcgt
     7981 ttattgttaa caaatggttg cttagttcat acaaacgatc agtgatagca ttttcatccg
     8041 ttaatgtcat atgtgcgtta ttaagcgcta aacttaattt ttcagagttt tgaatacgtt
     8101 taatatctat ttcaagttgc tctatttcgc cttcttttag atgtgcttca gacaattctt
     8161 ctaattgaaa tttcattaaa tctaaacgct gcagcaatgc ttggtctgct gattctaaat
     8221 cttctaactc tttctttttg gctttataat tttgaaaagt ttggtgatat ttatccaaca
     8281 aatcttgata acgtgattct gcgtaattat ccaataatgt taaatggtat ttttgtttca
     8341 acaaagactg cgtttcatgt tggccatgaa tatctaataa ttcttgcata acttttcgta
     8401 aatcttgtaa agtaactgtt tgattattaa ttttacaaag acttttacca gagctaaaaa
     8461 tttcccgttt aactaataaa aaatcttcat ctacatcaat atccatattt ttcaatatat
     8521 gtatagcatc tttactctcg tcaatatcaa atataccttc gatgacagcc tttttttcac
     8581 catgtcttac aaaatcagat gaagctctca ttccaattaa ttgtccaatt gcatctataa
     8641 taattgactt acctgaaccc gtttcaccac ttaaaacagt taaaccatca gaaaattgaa
     8701 tttctaactc ttcaataata gcaaattgct tgattgataa ggtttgtaac ataaactcat
     8761 cgcatcctta taacaaattg aaaattcttg acttgatttc atcacttgcc tctttgcttc
     8821 gacaaataat taaacaagta tcatcaccac aaattgtgcc tagtacttct tcccaattga
     8881 tttggtctaa tatagctcca atagattgtg cattaccagg taatgttttt agaacaagta
     8941 aattatcagt accatctata ttaacaaagg aatccattaa ataacgtccc aatttttcta
     9001 aaggatggaa ttttctatca tttggtaaac tataaacata ttgacctgaa ggtataggta
     9061 ctttaataag ttgtagttcc ttaatatcac gagatacagt tgcttgagtg acatttaaat
     9121 cataatcgtt taatcgttta actaattcat cttgtgtctc tatctgttca tttgaaataa
     9181 tttctctaat tttaatatgc ctaaccgatt ttttggtcac agtaaacacc tctgattacg
     9241 aatatttata catttatttt aacacatgca ctgatttacg actactaaac acctttacgt
     9301 aaaaagggta aacatggttt atctatcttg gttatctatt tataaatatt tttcatatta
     9361 cgcataacaa ttgcttaaaa tatgtataaa aatgaatata tgtgtaataa acttgctaat
     9421 tattagattt aataagcgtc aattgtttga acatatttaa ttaaaatcac attgatgtca
     9481 cagatgcgaa tattgtcgta tagaaattga aaattctatt tttaaataaa aagacttcaa
     9541 cataatttta agttacaaca tgagaaaaat cgattaacaa acaacgtcag ttaaatatgt
     9601 cttttgagac atttcaaact ttacaattgt tgctaatcga tatatttgct tttagtgatc
     9661 cctgctataa aataaatcaa cgatttctaa taagtgtttt gtattgaatt gttcatcaat
     9721 ttgcattagt tcatccactg ctgcgtctct atgataagtc aatttatctt ctgcgccatc
     9781 ttttcctaat aaactcacgt aagtactttt attattttca agatcgctgc ccactttttt
     9841 acctaacttc gcttcatcac catagcagtc taataaatca tctttaatct gaaacatcat
     9901 acctaaatga taactataac tttctaaatg ttctttagtt gcatcatcga cattagcgat
     9961 atctgctgca ctcataaccg caaaggttaa tagtgctcct gttttggttt tgtgtatcat
    10021 ttccaaagtt tcaagatcaa ttggttggcc ttcgctttgc atatctaaca tttgaccgcc
    10081 gaccattcca acatgaccac ttgctattga cagccgttgt agaactttta tttttacttc
    10141 atcagttaat ctatcatcac tcgaaataag ttcaaatgct ttagttaata aagcatcacc
    10201 tgctaatatc gcagtccact caccatatac tttatgattt gttaatttcc ctcgtcgata
    10261 atcatcatta tccatcgctg gtaggtcatc atgaataagt gaatatgtat gaatcatttc
    10321 tagtgcaatt gcgctcttca tacctaactc atactcggta tttagtgaat ctaaagtgag
    10381 taataacaga actggtcgga tgcgtttacc tccagcattt aatgaataca acatactttc
    10441 ttctagctga gtatccatta ctgatttatt tatcgcaacc gataattcat tattgacttc
    10501 atctattaat ttattcatcg gtagattcgt cattttttac atcctcagcc tcttctttta
    10561 ttaagtcatt cacctttttt tcggcatttt ttaaagttgt gtcacaagct gctgatagtt
    10621 tcataccacg ttgatataaa tctaatgatt cctctaaaga tactgtttca ttatctaatt
    10681 tttgaacaat ttgctctaat tcttgcatca tttcttcaaa actttgcgtt tctttagtca
    10741 ttattacacc ttactttcgt aacttttgca tctactaagc catctttcat tgttaacgtc
    10801 aattgatcat tttctgttaa atctttagta ctcgtaatga cttcgtcttt tttattaaca
    10861 attgcatatc cacgcaacat tgtattagtt ggacttaaat tgtttaagtt ttctacttta
    10921 tttttcaaat catttttata acttaatatt ttagaattca ataatttaac aagttggttt
    10981 gtcaattgaa gattattttg ttgttcttga ttaacactac ttagtaacgc ttttaaatta
    11041 tagcgttgtt gcaacagcat taatcgatgt ctctgttgtt caaaagttgc ctgaatttgt
    11101 tgtttcagtc tcttttctaa atcatcacga cgttgtatct gttgatcata caataaagtt
    11161 ggttgtttaa acttgtaata cgatgacaaa tgttcaacat gtttacgttg ttgttctaaa
    11221 tgtttcttga tgaaacgagt caatgtaaac tgatattgct gtatttgttg cagcaattca
    11281 tattggtctg gtgttgcaat aacagcagct tgagttgggg tcgcagctct gatgtctgca
    11341 gcaaaatcac ttaatgtaaa gtctgtttca tgacctactg ctgatataat cggtgtctta
    11401 caattatata ttgcacggac gacagcttct tcgttgaaat tccataaatc ttctatggat
    11461 ccaccgcctc gacctacaat aatggtatct acacctaaac tatctgcata ttcaattttt
    11521 tcaataatgt cgtcttttgc tttttcacct tgaaccaaag tactaatttg tatttgttca
    11581 gctaatggaa aacgactatt tatcgttgaa tggatatctc gaattgcggc acctgtactc
    11641 gctgttaaaa ctgcaatttt tttaggaaac ttaggtattg atttcttatt cgctttatca
    11701 aaacaacctt cttcagttaa ttttttcttt aatgcttcta atttttgata taagttccct
    11761 ataccatcta attgcatttt atttacataa atttgatagt ttccacgacg ttcaaaaaca
    11821 gaaacacgtg cttctaataa gacttcatct ccttctttag gttcgaagtt taatttagaa
    11881 gcactacctt tgaacatcat ggcacttata acgctttctt tatctttcac attaaagtat
    11941 aaatgaccac ttgaatgctt tttgaaattt gaaagctcac ctttaatcaa tacagattgg
    12001 agatgtggat cttgatcaaa tttatattta atatatttcg ttaaagctga aacacttaaa
    12061 taatctgaca tataacatca ctcaatttta tttttttata ttactcaata caccatttat
    12121 aaatttataa tgatcatcat cactgaattg ttttgttaat tcaactgctt cattcattac
    12181 gactttagca ggtgtatcac tgtgtaatat ttcatatgtt gccattctta aaataatacg
    12241 atccgttttt aataaacgtg caatagtcca atcttttaaa taaggactaa ttgtctcgtc
    12301 taatacaggt tcgtgatctt taacgccaga aactagccaa tgaataaatt cgaagtctaa
    12361 atctggatta tcatctttaa taaagcttat cgcttcattt atcgttaaat cactgtcctt
    12421 catttctaat tgaaataaag tttgaaaagc ttgcactcgg gattctttac gactcatttt
    12481 taactccttc aaacgtttgt atttttcttt atttaattac tgaattaggt atgacattac
    12541 ttttcaataa cgatttgtgt aatgtgaata ttaatttgct taggttctat cgctgtcata
    12601 ttagaaattg aattaaaaat tgacgtttga attttgtttg cagtttttga aatattaaca
    12661 ccatgtttta atgcacaata tacatctata tatatgccat cttctttact ctcgattttt
    12721 aaatcacggc ttaaattttt acgactaact ttttctaaat ttgtttcttt taattcagca
    12781 aaatggccag tgatgccttc gacttctgaa gtagctatac ttgcaataac agatagcact
    12841 tctggcgcta tttctacttt acctaatttt gaatttgaat aatcagttac tttgaccatg
    12901 gattgacctc ctattaacct tcatcattca taatgctatt ttgctctaaa aagtttgtat
    12961 taaatttacc gcttctaaat atatcgttat tcaataattt aatatggaat ggaatagttg
    13021 tatcaatacc aagaaccaca aattcactta atgcacgaat gccagccata atcgcttcat
    13081 ctcgtgtcgg ttcatgtatg attaatttcg ctaccatcga atcataatat ggcggtatcg
    13141 tataattagt ataacatgct gactctattc gaacaccata tccacctggt gcaagatatt
    13201 gctcaatttt acctggtgat ggcataaagt tcttgtaagg attttcagca ttaattctaa
    13261 attcaattgc gtgtcctgtt aatttaatat cttcttgttt atacggtaac acgtcgccca
    13321 tagcaacttg taattgtaat ttaactaaat caattcctgt taccatttca gttacaggat
    13381 gttctacttg aatacgtgta ttcatttcca taaaataaaa tttattatca tttaaatcat
    13441 atataaactc aattgttccc gcattttcat aatttacagc tttcgctgca cgcactgcgg
    13501 catttcccat ctcacgacgt gtttcgtcat ctaaaattgg ggaaggtgct tcttccacta
    13561 atttctgcat acgtctttga attgtacaat cacgttctcc taaatgaatt acattaccat
    13621 agctgtcccc aacaatttgg atttcaatat ggcggaagtt ttcgatgaat ttctccatat
    13681 aaagtccacc attaccaaat gcagtttgag cttcttgttc tgtcattcgg aagccagttt
    13741 caagttcttt ttcatcacga gcaacacgga taccttttcc gccaccacca gcagtagctt
    13801 taatgatgac cggatagcca atttttttag cgattttctt agcttctgag acgtctttca
    13861 ttaaaccgtc actaccagga acaactggaa cattggcttt aatcatttct gccttagcaa
    13921 catctttgat acccattttt tggatagatt gataacttgg tccaatgaac ttcaattggc
    13981 atgcttcgca taattctgca aagtcagcat tttcagctaa aaagccataa cccggatgaa
    14041 cgccatcaca acctgtagaa gttgcaatag ataagatgtt cggaatattt aaatatgaat
    14101 ctttagacaa agtgggacct acgcaatatg cttcatcagc aatttgagta tgtagcgcat
    14161 ctttatcccc ttcagaatag attgcaacag tttggatgcc taaatcacga caagcacgaa
    14221 taatcctaac tgcgatttca ccgcggtttg caattaaaac ctttttcatt atttcacctt
    14281 aaataacggt tggccatact ctaccatttg cccgtcttct actaagattt caacaatttc
    14341 acctgaaatt tctgcttgaa tttcattaaa tagtttcatt gcttctaaaa tacacactgt
    14401 tgtttcattt gaaacagtgt ccccaacttg cacatacgct tcttcgtctg gagatggcga
    14461 tttgtaaaat gtacctacca taggtgcatt aattgttttg tgattatctg aagttggctt
    14521 tggagcttca gttttattac tatcagttga ttgtacttga ggcataggca ttgccgcagc
    14581 ttcaactggc atttgtgaga tttgtggcgt gataatctca gtttcttttt ctttctttag
    14641 cgtcactttg cctttagtat cttcaatatt gatttccgtt aaagttgatt tatccagaat
    14701 ttcaattaat tctttgattt ctttaaagtt cattattact gactccttca gtttgttttc
    14761 atctacccgt ctattttact tgagacaact cttcaattca agcatgttca tattgctggc
    14821 gacattatat gtctatccct aagttataat aaaaacacat tttaaattaa aaacacttgt
    14881 gtatttatta cttaacattg actcatctta actcttgatt aaaaatttta tgcattcagt
    14941 taaacatatc aatgttattt ttattagcta ttatgtttta tcctcaacaa tatgatatgt
    15001 agatatatac ctttacttat gtctatgttt ttcactacca attagacgat tcgttttata
    15061 ttttaaaatt taatttaaaa ataaaaagcc tcatatcagc atataaccta taatcatttt
    15121 aggcaatagc tttatgagac ttatttggaa tatcttacgt taaatcagta tagtgaatac
    15181 aagctatttg ttaacaaatt agagattatc ctcttgaaat gtagcttcca tcaccagtgt
    15241 tgataattaa aacgtcacct tcgtttacaa ataaaggtac atttaatgta taaccagttt
    15301 caacagttgc cgatttagta gcaccagttg cagtatcacc tttaatacca ggttctgttt
    15361 cagttactgt taattcaaca gttttaggta attcaacacc gatagtttca ccttcgtatg
    15421 tttgaatttg tacttccata ccttctttta agtaattcaa ttcttctttt aagtaatcac
    15481 ttgaaagttc tgtttgttca aagctttcat tatccataaa tacatgatta tctccgtcag
    15541 catataaata ttgcatgcga cgattttcaa tcattgctgg ttcaactttt tcaccagctc
    15601 taaacgtttt ctcttgaatt gcaccagttc ttaaattacg taattttgaa cgaacgaatg
    15661 ctgaaccttt accaggcttt acatgttgga agtctataac tttccaaata gcgttatcaa
    15721 cagaaattgt taaacctgtt ttaaaatcat taaccgaaat cattcagttt cctcctcatt
    15781 ttacacgctt atgttaaaac tataaggtct tttgtgcatt tagtaaagac ttgacaacca
    15841 ttttctgtaa ttaaaatatc atcttctatt cttataccgc ccaaaccttc tatataaaca
    15901 cctggttcta ctgtaacaca gttgttaact tgaagtttat cttgtatcgt acgagccagc
    15961 attggccctt catggatttc taaaccaata ccatgtccta gtgaatgtcc aaattctttt
    16021 ccataccctt ttgactctaa atagtttctt gaaatggcat cagcttctgc accagtcatg
    16081 ccaggtctaa tctcattaat tgctttcatt tgagattcaa gtactatttg atatatttct
    16141 ttcagtttag gatctggttc tccaatagca aatgttctag taatatctga acaatagccg
    16201 ttataatatg cgccaaaatc taatgtaatc atgtcgcctt tttcaataat tttgtcactt
    16261 gcaacaccat gtggtaatgc acctctatga ccagatgcta caatcgtatc gaatgatggt
    16321 ccatctgctc ctaattctag cattttactt tctaatattg cctttaattc tttttcagtc
    16381 atacctgctt ttacaacagt taaaatatat tcatatgttt catcaacaat attagctgct
    16441 ttttgaatta aagcaatttc gtcagcatct ttgacgtctc taattttatc tacagtatta
    16501 gaaatgctta ttaatgatat acggctttta tttaattcaa ggtatgtatc ataactaaca
    16561 tgatgcccct caaaacctac attttcaaaa ttttcttggt gtagtaattc tttaatctca
    16621 ccaataatag tagatttacg attaataatt tcataatttg gcgcctgctt agttgcttga
    16681 tcaatatatc taaagtctgt tatcaaatat tgtttatctt tagatatgat aagtgctcca
    16741 ctggtaccag taaaacctga taaatatctt ctattgtaat ccgaaagaat gataatcgca
    16801 tctaaatgtt tttgttctaa aatacgatgc acttgtgtta ttctgctcat cttattacct
    16861 cctagtgaaa cgtttgtgca tttcaacttt atacattaaa ataatatcat aataaggata
    16921 aaaaataata gatattgatt ttagggagat agtaatgaaa aaattggttt caattgttgg
    16981 cgcaacatta ttgttagctg gatgtggatc acaaaattta gcaccattag aagaaaaaac
    17041 aacagattta agagaagata atcatcaact caaactagat attcaagaac ttaatcaaca
    17101 aattagtgat tctaaatcta aaataaaagg gcttgaaaag gataaagaaa acagtaaaaa
    17161 aactgcatct aataatacga aaattaaatt gatgaatgtt acatcaacat actacgacaa
    17221 agttgctaaa gctttgaaat cctataacga tattgagaaa gatgtaagta aaaacaaagg
    17281 cgataagaat attcaatcga aattaaatca aatttctaat gatattcaaa gtgctcacac
    17341 ttcatacaaa gatgctatcg atggtttatc acttagtgat gatgataaaa aaacgtctaa
    17401 aaatatcgat aaattaaact ctgatttgaa tcatgcattt gatgatatta aaaatggcta
    17461 tcaaaataaa gataaaaaac aacttacaaa aggacaacaa gcgttgtcaa aattaaactt
    17521 aaatgcaaaa tcatgatagg agtcttttaa tgcgtaatat aatattttat cttgtactta
    17581 ttattgctgc gattggatta gtaatgaatc tagatgcctt tattttttca atcgtcagaa
    17641 tgttagtcag ctttgctgta atagctggta ttatttatct gatttattat ttcttcatct
    17701 taactgaaga ccaacgcaaa tatcgcaaag caatgcgtaa gtataaaaga aatcaaagaa
    17761 gaaaatagat aaaaaaatgg aagcagttgt agataaaata gtctacgtgc ttccattttt
    17821 tattctaaaa actactttct aaacatccat tcatctgaac gatatttttc agttaattct
    17881 tccacttctg ccaattgagc ttctgttaat tcaagtggct ttaattctat atttaaacct
    17941 ttcttaaaac ctttctcgaa agcttcttcc atttgactaa tagtaatgtg ttcatctgaa
    18001 atatcattga tggcaactgc tttttcaacg aatgcctctt tcatttttaa ttttaatctt
    18061 tcatttttat aaataaacat atcaaacaat tcatcaatat caatatcttg taaaatcgaa
    18121 ccgtgttgga ggattacgcc cttttgtctc gtttgagcac tcccggcaat cttacggcct
    18181 tcaacaacta gctcatacca acttggtgca tcaaaacaca ctgaacttcg aggttgtttt
    18241 aatttttgac gctcttcagg cgttttaggt accgcaaaat aagtatcaaa tcctaagttt
    18301 ttaaatcctt ctaataatcc ttgtgaaatc actctgtacg cttctgtaac agtagaaggc
    18361 atattgggat gcgattcagg cacaatcaca ctgtaagtta gctctttatc atgaagtacc
    18421 ccacggccac cagtttgacg ccttacgaga ccaaaacctt tctctttaac cttatcaata
    18481 tcaatttctt tttgtagcct ttggaaatac cctattgata atgttgcagg attccatgtg
    18541 taaaaacgta taactggatc aatttcacct ctagagacaa aatttaataa cgcttcatcc
    18601 attgccatat tataatatgg gtctttactt cctgtattaa taaaattcca agtttcagtc
    18661 atattcaaga actcctatca gcaaaatgta taatatttga ttcgctaatt aatcaattta
    18721 actaaatgaa taataattgc aattctttag tgaaatattt tgataatttg acctaacagt
    18781 cttataatta tattatcgtt taattaggga ggatgcaaga tgagtgctag tttgtacatc
    18841 gcaataattt tagttatagc aattattgct tatatgattg ttcaacaaat tcttaacaag
    18901 cgagctgtta aagaattaga tcaaaatgaa ttccataatg ggattagaaa agctcaagtc
    18961 atcgatgtta gagagaaagt tgactatgac tacggtcaca ttaatgggtc tcgcaatatt
    19021 cctatgacaa tgttcaggca acgattccaa gggttaagaa aagaccaacc ggtatactta
    19081 tgtgatgcca atgggattgc tagctataga gccgctcgta ttttgaaaaa gaatggatat
    19141 acagatatct atatgttaaa aggcggctat aaaaaatgga ctggaaaaat aaagtctaaa
    19201 aaatagtttt gtaaatttaa tatacgattt aataaaatct gagtgttaat tgatcatcaa
    19261 taacaatact cagattttaa ttttttaaca aagtctgtta ctatatttct ctagcttcac
    19321 agatcattaa acttagtttc agcataataa agaaagttca gctcattttc aatacgtttc
    19381 atttacctca atctaaaaag tgaaaagaca atttctatga aagaataaag ccaaacccta
    19441 agagttatta gttcggttta gttttctttt tcaaatagaa attgtctttt ttaattgatt
    19501 ttgaaaccat tatccttaaa tcttcataca aaggtagaat aataattctc ggaatatgtg
    19561 tttaatacct tatttttcct gtttaaggtt ttcaaatttt aatattggtt tacgagcagc
    19621 tgtagcttcg tctaatcgat caatcacagt tgtatgtggt gcttctagca ctttatcagg
    19681 atcattttta gcttcttcag caatactaat taatgtatcg ataaaataat caagcgtttc
    19741 tttagactct gtctcagttg gttcaatcat cataccttct tcaacattta atgggaagta
    19801 gattgttggt ggatgtacac cgaaatctaa taatcgctta gccatgtcta aagtacgtac
    19861 accaaattct ttttgacgca caccacttaa cacaaactca tgtttacaat attgtttata
    19921 aggtatttca aagtgttcag ataaacgtgc tttaatataa ttcgcattaa gaaccgctgc
    19981 ttcggaaacc tctttaagtc cagttgctcc catagttcga atatacgtat aagctcttaa
    20041 gtaaatacca aagttaccat aaaatggttt tacacgtccg atagaatttt taatgtcatt
    20101 atcatattta aatttgtcgc catctttaat aaccattggc tttggtaaat aacttgctag
    20161 ttcttttact actccgactg gacctgaacc aggaccgccg ccaccatgtg gaccagtaaa
    20221 tgttttatgc aagtttaaat gaacagcatc aaatcccata tctcctgggc gaactttgtc
    20281 cataatagcg tttaaattcg caccatcata atataataga ccaccagcat tatggacgat
    20341 ttcacggatc tccataatat ttttttcaaa aatacctaaa gtgtttggat tagttaacat
    20401 aatagctgct gtattttcat ttacaacacg tttcaagtca tcaatatcaa cttcgccacg
    20461 ttcgtttgat tttacagtaa ctgatttaaa tcctgcaaat gaagctgagg ctggattcgt
    20521 accatgcgca gaatctggca caatgacttc atcacgatga ccttcaccat tattctcatg
    20581 ataagcttta aatatcatca atgcagtcca ttcaccatgt gcaccagcag ctggttgtaa
    20641 tgttacctca tccataccag taatttcttt taattcttct tgcaaactat aaataatttc
    20701 taatgaacct tgaacttggt cttcatcttg taatggatgt gattcactga atcctggtat
    20761 tctagcaacc ttttcattaa ttttagggtt atacttcatc gtacatgaac ccaatggata
    20821 aaatccgtta tctacaccga aatttttatt tgaaagttca gtataatgac gtaccaagtc
    20881 tagttcagca acttcaggaa actccgcttt gtttttacga ataaatttat catctaacaa
    20941 tgactcaaca gaatttgttt taatatcact tattggtaat gaatatgcat atctgccttc
    21001 acgagatctt tcaaaaatta atggacttga tttactagtc atttaactca ccagcctttt
    21061 ctacaaatgt atcgatttca tcctttgttc ttaattcagt tacagctatt aacatgtgat
    21121 ttttaaagtc gtctgaaaca acacctaaat caaaaccacc gataatattg tacttcacta
    21181 attcctcgtt aacttgttga attggtttgt caaatttgac tacaaactca ttgaaagatg
    21241 taccatctaa tacttcaaaa ccttttttaa taaattgttg tttagcatag ttagcatgtt
    21301 ctatattttg aactgcaata tcatagatac cttgtttacc aagtgctgac attgcaattg
    21361 atgacgctag ggcatttaat gcttggttag aacaaatatt agatgtcgct ttatcgcgtc
    21421 gaatatgttg ttcacgtgct tgtaatgtta atacaaagcc acgattacct tcatcatctt
    21481 gtgtttgacc gactaatcta cctggcactt tacgcattaa ctttttcgtc gttgcaaaat
    21541 atccacaatg tggcccaccg aattgagcag gaattccgaa tggctgagta tcacctacaa
    21601 caatatctgc accaaatgaa cctggaggtg taagtaatcc caatgctagt ggatttgcat
    21661 atacgataaa taatgctttt ttatcttcaa taaagctatg aatcttttca agatcttcaa
    21721 ttgaaccgta gaagtttgga tattgtactg caacagctgc tgtttcatca tccactgctg
    21781 cttctaattt tttcaaatct gtaacagtgc catctaaatc gatttccact acttcgaatt
    21841 ccttacgcgt cttagcataa gtatgaagta cttgtaatgc ttgataatgc aaaccttttg
    21901 agactacaat tttatttttc tttgtttgac taaatgctaa aatacatgct tcagcaaagc
    21961 tagtcatccc atcatacata gaagaatttg ctacatccat atctgttaat tcacaaatta
    22021 aagtttggaa ctcaaaaatg gcttgtaatt caccttgaga aatttccggt tgatatggcg
    22081 tatatgctgt gtaaaattct gatcttgaaa tcatagcatc cacaactgat ggcgcgtaat
    22141 gatcataaac accagcaccc aaaaatgatg tatgcgtttc tttagtaata ttcttgcttg
    22201 caatgcgatt taatcttcta agtaacgttg tttccgcttc gccttcagca atatttaaat
    22261 ctctatttaa taaaatgtca cttggtacat caccgaataa ttctcctata gattttgcac
    22321 caattgtttg taacatttct tgcttgtctt tttcagttaa aggtatataa cgatgactca
    22381 caatgcacac ccctttttaa ttatttatca atttgatttt tcttaacaat tttcgctttt
    22441 aattgacgct tacgaacttg aacaagcaac tctctaccca tttcaaactc atctcttttt
    22501 atcattgcaa gtgcaattga ttttcctgat gatggagact gtgttcctga agttacttct
    22561 ccaataatat ttccatctaa atccataact tcataaccag ttcttgcaat tcctttttca
    22621 agtaattcta atcccactgt tcttcttggt gcaccatttt ctttttgatc ttttaataca
    22681 gatttaccaa taaaatcagc atcaattaat ggtttacttg caaaagcgat accaccttca
    22741 tatggtgtaa ttgattcagt taaatcttgt ccatgtaatg gcaacccagc ctctaatctt
    22801 aatgtatcac gagcgcctaa cccacatggc ataacattat actctaataa accatcccaa
    22861 attttttcag tatcatcgat attacaataa atttcaaacc catcttcacc tgtgtaacct
    22921 gattgagata aaatgacgtt tgctccaaat aatttgacgc cctgtttaaa ttcaaacatt
    22981 ttcatttcag ttacatcttc atcaactaat tgattaatta aatctctagc ttttggtcct
    23041 tgtattgcta attgaccata ttggtttgat acattttgta cttcaacatc aaatttctct
    23101 ttgtgtttta aaatccaatt aaaatctttt tcagtattag cggcattaac gactaataag
    23161 taattgtcgt cagctaattt atatattact aaatcatcaa taataccgcc ttcttcatta
    23221 cataaagcag tatataatgc ttttgaagta gttaaattat cagtatcatt tgataataaa
    23281 tattgcacaa actgactagc atctttacct gttacttcaa tttcacccat atgactaaca
    23341 tcaaacaggc caatttcgta tcgaacagca ttatgctcct ctttaatact tgaaaattga
    23401 acaggcatcg cccatcctcc gaattccaca atttttgcac ctctatcaac ataattttga
    23461 tataaaggtg tttgttttaa atcacttgac attgaaatac ccccttaaaa ttataaaaac
    23521 aggatagcaa tcgctaccct gtttataaat caccaattca ggaacgcgtt acagtattat
    23581 ccttttgcct gagagtttcg taataaatta cttgcacctt cggcgataga gtcttaacgc
    23641 tctattctct ctaatactga tcactcgctt ttattaaatt tagcaattca taatatattt
    23701 ctgaaattga tagcaaatga ctatcaaatt tcttgaatgc gatttcatta tatcttaaaa
    23761 tccgcgagca atacaagtca tttaactgcg tgattgtctt attatttgca ttaggtcgat
    23821 gtgggtcatc attgattcga ctatatataa tatcaatatt acaatctaac caaataatgt
    23881 ttttttgatt tttcaaaaaa ttaaatgcct cttcactttc aataatacca ccaccagtag
    23941 caattatatc tgcagtgtta atacattctt gcaaacatgt gaactctaaa ttcctgaaat
    24001 attgttcacc atgtttacta aatatttctg gtattgttaa cttatacttt tcttcgatat
    24061 atgaatctat atcaataaat gataaatgtt gctcatctgc aacgtattta ccaatcgtag
    24121 atttaccggt acccatgaaa ccaattaaaa ttattggtga tttatcatga ttcatgcgtt
    24181 ttcccttctt tcaataacaa aacaatctta tagttatagt cagtttcaat attatataat
    24241 gtctttaatt ttaaactata ttgactgata taaaaagtga aaatggaaaa ataaattgct
    24301 gttagcatca ataagaaagg cgtaacatac cctttttctt tatataaatc aaaattaata
    24361 aattatttca catccttttt aatagtactc atttaaattc tagtaagtta tacataaata
    24421 gttttagtct gcacatttgt accgacttta actgttatcg ttattttaat aatggattta
    24481 tagtagatat ttgcagtaaa tgctgtaaca ttattaatca ttgttatatt tcctctgtca
    24541 tttacaactt taataatttt attatttatt aatttgtatt cgatcatttc ttcaccttta
    24601 tgtaaaatga tacgctgttc cctattttca atattgtttc tatctactcc tttaaaatcc
    24661 tctagaatat ctcttgagaa aaattcgaaa tctacagttg ttaattccct actttcaatt
    24721 agaaaagttt tgctaagtct aattaagtct ggaacaatta gtaaagttat acttataacc
    24781 atcatcgcta ctaacatttc aatgagagaa aaagctttga cattaatact gtatacatgt
    24841 cttttgataa gaagtggtat tttttgaaat agcacaaatt tgttggtcac tttgcttaat
    24901 atcatacttc cctatagtta cccccttctt aagctcttct ttattaattt tagatacagt
    24961 cgtcaaaatt actttagaag catcaattgt ttgtagttta tggtttatac tcgcttgcat
    25021 ttgattcatc attggtatca atagtaatgt aatcaatcca ataagcaaaa atccagccat
    25081 actatctatt aagaatgatc ctttacactt atagcttttc ataacgaatt cttccttttt
    25141 caatatggaa tattattcta taaattgaat tgttattatc aattgttatg ctaccaaatt
    25201 tattgatatt ccctttttta tcaaaggcaa taatatcaac ttttgcaaca ttaattattt
    25261 tgcctacttt taattttaga aatcgtattt tattattctc tattacttta atagtgtcac
    25321 tgttttcata aaatctaaca ttgatatatc cttgatttgc tatagcttgc gacttaatat
    25381 aattcaattc agtaataaga gaaatgatat ttgcctcatc atctattact ctaagattgc
    25441 ttaatccttt agatgtcatt gtcaaaagta aaaatatact gattaacatc attaccacaa
    25501 gcatctcaat catagtaaat gctgactgct ttctaatttg caactgcttc tccattacta
    25561 attgttattg tctctcctga tttacatgtc ttttgtgctt cttttataaa accatctgca
    25621 attaagtctt caatagacga tggatttcta ttatgtttca atgcatacgc ttcaatttga
    25681 ctattaacca tttttacctg tgcattacaa cctgttgatt gtatgtgagc agtttgttta
    25741 gcaatatttg gaatgattaa aattaataat aaactgatga ttaataacac taatagcatc
    25801 tctatcaatg taaacgcttg agttttctta agaaatttaa acatatatta acctccatta
    25861 ttttatactt tgcatcattt gaaacattgg taacataatt actaaataaa ttgcgacaat
    25921 aaataaacct aaaatcaaaa ataaaatagg ctgtaaaaac tgagtctgtt ttatcgcttt
    25981 atcttctatt tgttttacta atatttgcga atataacttt agttctactt ctagcttccc
    26041 tctcttttca ccttgtagca caaacttaat taattgaggc ttaaagcatt ttagtttttc
    26101 taaaatttga ggtaaaccat atcccatttc tgaataagtt aataagtatt tacctagaaa
    26161 ctgtctaaat ggatcactac tatggttaat ataaacgtct actattgatt gaagtgtaat
    26221 accattttta taaaacaaca ctaattcatt agttacaaaa taagttttaa ataattggaa
    26281 atagcctgat attaacggta gtttcatcac aaagtttatc ttattgagca tatttaattt
    26341 gttataaaat aatttcataa taatagccaa tatagatacc attatgagca ttactacaat
    26401 tatagtaggt aagctggtaa tgaaaaaaga caatgttttt tgaaaagaag atagttgaat
    26461 attcatagaa gtatataatt gttgaaactg tggaattact gtgaggttta atataataat
    26521 catagcaata aaaatagaaa ctagtattaa ggggtattgc agtgtcttta acaatcgttg
    26581 ttctgacttt ctattcactt tcatataatt tacggtttct tctagaacgt ctatgatatt
    26641 gccaaatctt tctgccaaat atacttgcat gacgatagta tcgctataac ctatcagtga
    26701 taatatctga ttgcatggtg caccatttga aatttcactt agaatggtgg tacctaattg
    26761 cttattttta tatgccattt gaagatttaa aaattgaaaa ctttgataca gagtgaaacc
    26821 atatttcaac aaattacata aatttgaaag taaatcgatt tgttgggcct tacttaattg
    26881 tcgcttctta gaatgtagtt taaatgtatt tatccattgt agtttcacaa atgacacctg
    26941 cttttgtcat atcatcaagt ttatcttcta agttcttaaa tgatgatggt aatgaatgat
    27001 tatgggaaaa gaaatatcgg agttgttgct gagatagaat ttcacatact aattgtcgct
    27061 gttgcttaat agtagttaca agtcgttggt ttataattaa gttagttgcc tgtatcaatt
    27121 cttgtacaga aatgcccatt tctaatagcc ttaaaatagc acccttacaa tcagttgcat
    27181 gcaatgtagt cagaacaagg tgaccactta aactagcctg tataacacac ttggcaacat
    27241 ctttatctct gatttcacct attaaaatta catcaggatc acatcttaaa atagctttaa
    27301 acgaatttac atagttaatg ccagctttat cattcacatt aatttggacg ataccaggaa
    27361 tttgcatctc tacaggatcc tctatagaaa ttacatttaa attcagggct ttattcgcgt
    27421 atgagaccat ttgatacatt aatgtactct ttcctgaacc agttggccca ctaaacaata
    27481 gtaattcttg tttcttattc atgaggtgtt taaaatcatt gaatttataa gttgatttct
    27541 gttgttgaaa aaattgaggt acaattctga taacacaact ttcttggcca agtgacaatg
    27601 gtaaagttga tattctcaaa aaatatattt tattgaaatg gtaactatat cgaccgctct
    27661 gtgcgacttg ctgtgtagaa acatcaagcc cagcttgaaa cttcatataa actaataact
    27721 tttgataaat gctattccca atttgttcat actgctccaa gttatcatta attctaaatt
    27781 taatacttac ttcattttta actggaataa aatgtacatc actcgctttc atttctatcg
    27841 ctttattaat tatttcttga aatagaatct tcaaaaaaac acctcctaca tataatcacg
    27901 taggaggtgt ttttattact tcaatttaac cgtgtaaaaa tggatttaat tgttcatcat
    27961 caaccgtcgt atatggacca tgtccaggga ataaaggtaa atcgccttct aattcaaata
    28021 ttttatcttg aatagaatca actagcgttt cataatcacc tttatataaa tctgtacgtc
    28081 cgattccatt attaaataat gtatctccaa caactgcgaa ttcatcgaac acatatgtta
    28141 aacttcctgg tgaatgtcca ggtgtgtgta acacattaaa cttaaatcct tctatttctg
    28201 tgctaccttc gtttaacttt tcaggagtta ccttacttgt aataattggt aatccatatt
    28261 gcttaaattt atctgcccca tttttaacgg gatcttttag aaaatcaaac tctgcttcat
    28321 gcatataaac cgggacatcg aatcgatcaa ctatatcatc gactgctccg atatgatcaa
    28381 agtgtgcatg tgttaataaa atagctttta acggtttatt tatttggttt aattttttaa
    28441 taattttttc actttcacct gaagggtcaa tcaggataac agctttgtca ttttcgatga
    28501 aatacgtatt agtatcaact aagcctaaag ttaagcttga aatcctcata ggttttcacc
    28561 actattttct aaatgttttt gtactgatgt tagtttatca ttcatttttc tagatttgtc
    28621 tcgtcggtca tcaatacgta tatttgtaca aactctactt aaacctttat caaaaggtaa
    28681 ttcatgtatc acttgcacaa cttctaatac atcgcttaat tcaccttcaa ttagagtatt
    28741 cattggtgtt aattgaaaat caattttacc catcgcttta tattcttgaa gttttttctg
    28801 aatatctgca atatacttac taacactcgg accttccgtt ccaactggaa taacaaccac
    28861 atcaacaata gccattattt taccccctct ttatctaata cataggtctt gattaatcct
    28921 gctgctcctg taatacctgc atcattaccc aatttcgctt gtacaatttc agtttcaaat
    28981 tgagcaggtg taaatgttaa attatgatat tctgttttaa tattttcaat taaaataggt
    29041 cctgcagtag acattcctcc acctagaacg atatatttcg gattacttgt aacactaata
    29101 atactacata aatatccaat atagtttgca accttttcag taatgaaaat acagaattgg
    29161 tcaccagctt ttgccgcatc aaaaacagct tttgctgtaa ccttattttc tttaatcaat
    29221 tctaatatag aagatctaaa cgtcaactta ggatagtaga agttaactaa gttaacaacg
    29281 cctgtggctg aagcaactgt ttcaatacat ccagaacgac cacaattaca tttaaatcgt
    29341 tgatcgaagt ctgctctaaa atgccctatt tctgcgccag agccattatg accatgtacg
    29401 atttcaccat ttgaaataat tcctccaccc agtcctgtac caagtgtgat ggcaacaaca
    29461 tcatcggcac cttcaccagc acctttgtgt ttctccccta aagcagctat gttagcatca
    29521 ttatctacat acactggaca atcaacgaat tgttcaaaaa tctcacgtac attaactttt
    29581 tctggccaat ataagtttac tgctccattt actgtacctt tttcaaagtc aacaggacct
    29641 ggtacaccaa tacctacgcc aagtacattt gaaaaattat aattattttc atttactttt
    29701 tcaacaaacg aatcataaat tcctttcaaa agtgtatatc ctgtactatc agatgtatca
    29761 gtgtgaatag accatttatg taattgttct aattcaggtg tgaaaatacc taatttacaa
    29821 gtcgtcccgc ctacatcagc tgctaaaata atttttgtca tttctgttca ttccttctct
    29881 gattaattat caacgtacat ttcaaatatt cttccttaga taacagttca tattgataca
    29941 atgatgaaat ctcctgttga atcatttcgt acatatcttc tggattttta aaatatatta
    30001 gaaatccgta acttttcaat aactgttgta catcataaaa gttatttatt tttcgactca
    30061 tttgatttag tcaactcttt ttctaagtta atataatctg tatttttagg gtcagcattt
    30121 aatgctttac gcacatattt taatgctttt tcatcatcat ttaatgaacg atttgctatc
    30181 gctaactcaa aatttaataa acctgattta ggaaacattc taagtcctcg ctcccattct
    30241 gtcatacctt cagacttaga attgatagta gccataatca taccacttaa ataatatgtt
    30301 tgatcatcgg cataattttt atttattgtc tgcttcacaa tattttgagc attatcataa
    30361 ttaccactag tcatatcatc tttgatcaat ttattataaa tattatcttc tttaattgta
    30421 aaaattctaa tttgaagtgc aataaatata acaagcatac caattagtaa aatccaaaaa
    30481 atattacgat tcactttata gtaatagcca attaaagtta ttaataaacc accaatgaat
    30541 cctccaatat gcgccacaat atttatattt gacataaaca gagaaacacc aactaatatc
    30601 actaatgaaa ttaataactg tcctaacatt tttttgttaa atgtttttga aacatacatc
    30661 atcgcaaaaa ttgatccaat cagaccaaat atagcaccac tagccccaac tgaaattgta
    30721 gtcgtattaa atgaaagtga tacaaagttt ccaaacagcc ctgcaataaa gtatacagtt
    30781 aacatcctcc atgaaccaat aattgcttcg actattttac caaaaataaa taatgaaagc
    30841 atattcataa gtatatgttc aaaactaaaa tgtaaaaaca tcgatgtaac aattcgatac
    30901 cattcaccat gtacgacatt aaaatgcact aacccgccaa catctaataa ttttacatcc
    30961 gaaaaattat ttaaatataa aatcatacat aaccatatta agacatttac aaatattatt
    31021 gtgtatgttg ccggtgaaaa tttctgcata tatttatcta aaaagttatc agttaatact
    31081 ttgcgtttat agaacatata tgtcttttta tcattatctt ctgaaataag tctagccaaa
    31141 aatatattcg gcatatgctt tatcaaatct tttgtgtgtc ttataacatt gaatttaatt
    31201 ctaattggcg aaacttcatt taattgttct tctgaaaatt ccgattctgt aaaataataa
    31261 aattcaaaac tttgtggttc gaaagaaata aaatttgcta tttcatcttt gtgttcaagc
    31321 accttcgctt tgtcaaaacg tatttcttgg gtagacttga tatgttgttt aaaaatgact
    31381 acttgttttt ttcttttatg ggctaaccaa atttcttgat catctttttc cctactgaca
    31441 atatcaaaat tcaagtacct aatccaataa tatattgttt tccaaaattg tttgtctatg
    31501 ttcatttagt cctccactat gctgattgat atataatcaa tttatcgact ggtcgatcga
    31561 atgattccgg ttcaaatgat gttatttgaa aatcgtataa taagcttatt gtctttgtct
    31621 gataattagc taaaaacctg tcgtaatagc caccaccata cccaattcta tatccatcgt
    31681 tttgaaatcc gacaccagga acaacaatta aatctaggtt attcgttgtt tcaccttttg
    31741 aagttggata gtaaatcccc ttattatcga catcaatatc tttgagatta aatatctctt
    31801 taaaagtcat ttgatggttt aaataatcca ttttcggtac aaaaatacgt ttatgatcca
    31861 ttaaggcttg ttcaattata gaaaaagtat caacttcatg attaaaagaa agaactagcg
    31921 caattgcgtt tgcttctttg tattcttcag ttgcaaaaaa ttgatttctt aaccatgtgt
    31981 ctgcttttcg cttttcagct ttattaaaat tcttcatttt atgtaaaatg tattttctaa
    32041 tctcattttt agtcacatta tcacccactt tattcaattc tattatatcg ttaataacaa
    32101 tacatgtcat tatgttgtca tgatgaatta tgcgacaatt ctaaaattta ttatttcaat
    32161 tgaaaatctt ttatcatttc atacgtgtgc acaattaaaa aggtgaaacc tcttattttg
    32221 agatttcacc ttttttattg ttaatttaaa tttaatttta atgattattt tgtttcacgg
    32281 tgtaaagttt gtttgttttc acgtgaacag aatttcttca tttcaacacg ttctggatta
    32341 tttcttttgt tcttagttgt aatgtagttt ctgtcaccac attccgtaca agctaaagtt
    32401 acgtttacgc gcatggttat tcctccttat catttctaaa tacgacttta ttattatacc
    32461 aacatctata atatttgcaa agttaaaatt ttacaaccat gcgctacaca atcgtcaggc
    32521 taaattttat ttgtctttgt ctttattttt atcatcttta cctaactgct taaagtagta
    32581 gttaattaca tctctaccta agtctccacc tgttaaccat ggtggtggta caggctgatt
    32641 tgtatataca attgaaaacg ctaattttgg atcatcaatt ggcgcgtatc ctatataagt
    32701 agagttaact cttggctctc cgttttggaa cacttcagcg gtacccgttt taccagcagt
    32761 agggactact gtatctttaa aactaacata tccagtacca tctttatcat taaatgccat
    32821 tttgaatcct tcttgaattt gtttgatttc tttttcagta ttattaacct tgttcaatac
    32881 ggtgccatta attttcttct tgagtggacc aacctcatct ttattagttg attcatgaat
    32941 cgttaatcca atgtgtggct gtattctata accatcattc gctatagttg aaacatattg
    33001 tgataattgt aatggtgtat aggtatcata ttgaccaatt gataaatcta gataattacc
    33061 tggattattt gttaatggtt cgatttgacc tcttgtttca tttggtaaat ctattcctgt
    33121 tttcacacct aaacctactt gatttaatcc tcttcttagc ttttgggcag gtgaacttat
    33181 gtctgaaggc aaagccatac cagaataata agggtctccc gctaatttta atgctgtttt
    33241 aaacatatat acgtttgatg aatgcatcaa agcttgctta tcattaatag atacatgccc
    33301 gtttttatta aagtatgatc gttttgtcaa accaccttgg aaatgtaatg gttcatcgac
    33361 cattgtttct ccaactttga tagctttatt ctgataacca gctaataatg ttccaccttt
    33421 tacagaagat ccaaccgcaa attgagaagt aaacgtacca atgtcataat cagtcatttt
    33481 accactctta ttaatctgct ttccggcaag cgcaagaatg tctccatttt taggattttg
    33541 tacaaccatc atagcattat ccatatcttt ggcaccttgg ctgcgaagct tcttaatttg
    33601 tttatctaat aatgattcta cttctttttg aagatctata tcgattgtta atttcaaatc
    33661 ttgaccgcga gcgccaggat ttaacacttc tgaagatgta acttttccag atttgtccgt
    33721 tgtgtatttc atttctttct tcttaccacg caatacatct tcatattgat attctaggta
    33781 agattttcca acacgatcat tgcgtgaata tcctttggat aagtaatgtt ctgtcaattc
    33841 ttttggaata ccttcagcag gtgtcgatac atctccaaat atacctctta aagtgtcgcc
    33901 atatggatat tttctatccc aatccataga cgtgttaaca cctggtaatt tggaaagttg
    33961 ctgagaaact gctgcatact ctttttcact gacatcttca ttttttatca tttgtggatc
    34021 taaaactgtt cctgcattca tctctcgaaa aatggctaaa acttgtaaat ctttagaaga
    34081 caattcatct aattgtgatt ttccgatttt cgataacagt tgtttatcat attgatcttg
    34141 tttaatactt ccatctgcta acatagcttg ttcttttgtc atcattgctt ttgctttttt
    34201 aggatgcaac tgaatccaga aatctttctt atcacgttct gtaatcttct tagtatccat
    34261 cttgattagc tttgataact tttcagccgt atccaacatt tccgattgtg ttgtttttcg
    34321 acccctagta tatgtaatag ccattttaga agcattatca actaaaactt tcccatttct
    34381 gtctaaaata cgacctcttg gcacagactc atttactgta atgttttcat cattttttat
    34441 aatttgttta taatgtgagc cttgtgcgat ttgtaaataa cctaaacgta gtactagtac
    34501 tgcaaaaata aatacaatca caccaaatat aaagttaatt ctcttgttaa ttgtattttg
    34561 aacgatttca tcatttgatt tttcttttag tctttttaac aaaactacct acctctattc
    34621 aaagtctttc actttaaatc atatatgaat ttagaaatta tttctatctt tttgacaaaa
    34681 aaataacggt ctcatttaag agaccgaaca agtaatcata ctttattttg ttgcattata
    34741 taattcgtca actttttccc agttaactac attccaaaat gcgccaatgt agtcagggcg
    34801 tttgttttga tattttaggt aataagcgtg ttcccatacg tctaaaccta aaataggtgt
    34861 tttaccctca gttaatggat tatcttggtt tggtgtagtc acaatttcta actggccatt
    34921 gtttacgact aaccaagccc aacctgaacc aaagcgtgca gctgctttgt cagcaaattc
    34981 ttttttaaat tcttctaaag aaccccattg ttctttaatt ttttctacta cagtaccttt
    35041 ttcttctgag tttggtgaaa gtaactccca gaataatgaa tggtttaaat gtccaccgcc
    35101 attattacgt acagcagttt ggatgttagc tggtacactg tctaaattag caacaatttc
    35161 ttcaatagat ttagattcta aatctgtacc ttctactgca gcatttaatt tcgtaacata
    35221 agtgttatga tgtctgtcat ggtgaatttc catagtttct ttgtcaaaat gtggttctaa
    35281 tgcatcaaat gcgtatggta attttggtaa ttcaaaagcc ataaataatc atcctcctaa
    35341 aatgtctgta agtaaataat aacaagcagt gactggttca acaaagaatt tgcttaaatt
    35401 ctactactta ttattttctc tactcattta atataactca aatcaaaaat aattaaacat
    35461 tttgtatata aaaagttaac agatttgcca taaaatcata cgaacggagt atgaaatgaa
    35521 cctttatctt ctataattta aaaaatgaga tttatgcata catctgacca aatgtgcata
    35581 aatctcattt ctttatatta atcttggcaa gactcacata caccataaac ttcaagtttg
    35641 tgtttgtgaa tattaacacc aggtagtgat aattttatct gatctattgg acaataatct
    35701 attacctttg tatctccaca cttttcacag ataaaatgat gatgatgatg gttcgtacaa
    35761 gcgattctaa acttcatttc accatcaagt tctgtatttt caataatccc taaatcttta
    35821 aataagtgca ggtttctata tattgtgtcg aatgaaattc caggataatt ttcatccata
    35881 acttgttgta tatactttgc gttaatatac ttatcttctt cgacaaaaat atctaacata
    35941 tctttacgtt tatctgtata ttttaaaccg ttctctttta aaattttaat agcatcattt
    36001 gtattcattg atattagctc cctttttaaa cttcattcgc attttctgat aagccattgt
    36061 aatcataagt aaaataacta gtagaactac aattacacca cccggagaaa tgtccatata
    36121 gaaagctagg actaagccta atattactga taattcacct aaaaatacac ttagtaatat
    36181 caattgctta aaactttttg ttattctcat acttattgca attggtaacg tgattaacgc
    36241 acttactaac agtatcccta caacacgcat tgaggcagaa ataaccatcg ctacaataac
    36301 aataaataaa aattgaatcc atttaggaat gccaatgact ttactatatt cctcatcaaa
    36361 tgacaatata aataattctt tataaaacaa tgtaataaac agaacaacta tgatggcaat
    36421 gacaataatc gttgttaaat cacttatatt cactgcgctt attgagccaa atagcaatcc
    36481 aacaatttct tgattgaacc catcagctaa tgaaatgaag attgcactca aggcgatacc
    36541 agcactcatt ataattggaa tagcgatttc ttggtaagca gtgtatgacg ttcttaattt
    36601 ttcaattaga agcgcaccta ctattgcgaa taagattcca aaccacattg gattaataaa
    36661 tactagtgtt ggcataatag taagtaaaaa cataccgaag gatataccac ctaaagttac
    36721 atgacttaga gcatcagcta taagtgatag tcgtctaaca acgataaaag caccgattag
    36781 aggcgcaata aaacctatca agataccact aattaaagag tacctcataa aatcaaaatt
    36841 caataatgca tctatcaatt gtgacacgcc tttccatttt aaataaactc aaatctttat
    36901 taattacaac attctcgatt atgctgatga tcgacaaaac gtacaggatg tccataaatt
    36961 tttgaaattt caacttcatc aagtgattta aactcatcag ttgtaccatg gaaatgcaaa
    37021 tgcttattta aacatgctac ttcagtagca gtatctgcta caacaccaat atcatgagta
    37081 actaagataa tggtgatacc ttcttgtttt aattgatcta aagtattata aaattcactt
    37141 acatgttttg catcaatacc attcgttggt tcatcaagta ctaatactgc aggttctgaa
    37201 atcaatgctc gagcaatcat tacacgttgt tgttgaccac ctgataattc tgttatattt
    37261 ttatgaatta aatcacttat attcagtctt tctagtactt taatcacttt ttcattatct
    37321 ttgctattaa atgtttggaa aagacgtttt gtctttgtta atccgcttaa aacaacttct
    37381 ttaacacttg ctgggaaacc tgaattaaag gcatttgctt tttgtgatac atagcttaat
    37441 ttaattgatg ttttcttatt tttaaaatct ataccttcaa caaaaatctc accactttgt
    37501 aaaggtaata atcctagaat caacttcaat aatgttgatt taccagcacc atttggtcca
    37561 acaattgcta aaaattcacc tttatttatt ttaatgttta tattttctaa cactttttta
    37621 tgatcatagt agtaattgac atttttcaat tcaaagactg gtgtcatcgt attctcacct
    37681 cgcattcaac tatacaactc ctagtaacat atgtaaacag taatgtttac gactcaaaac
    37741 aagacaaaat aaagagatat gcccccttca agtattattt atcgcatttc ttgaagagag
    37801 cattatcatt ttattgttgc ataactttat tttttaattc tgggtcaaat tgctgttgtt
    37861 ttaacatttc aatttcaagt ttatatggcg gttttttatt tttcttatct tcaccaacat
    37921 aaggtgtttc taagattttc ggaatatctt taaaacaatc atgatgcaca atgtaattta
    37981 atgcatcaaa accaatgtaa ccgaagccaa tattttcatg tcggtctttt tgagcgccac
    38041 ggtcattttt agaatcattg acatgaacaa ctttaattct gtcgactcca atgattttat
    38101 caaattcatt taatacgcca tcaaagtcct ctttcacatt atatccagca tcatgcgtat
    38161 gacatgtatc aaaacatact gataaacgtt cgttattatg aactccatca ataatacgtg
    38221 ctaactcttc aaacgaacga ccaatctctg tacctttacc tgccatcgtt tcaagcgcaa
    38281 tacgtacatt attgtcattc gttaaaactt catttaatcc ttcaataatc ttattaattc
    38341 cggcatcaac accagctcca acatgcgcac ccggatgtaa tacaatatct ttagcgccta
    38401 tagcttgcgt tctttcaatt tcttgttgca agaaatctac accaagatta aacgtttctg
    38461 gtttggttgt atttgcaata ttaatgatgt atggtgcatg aacaacaata ttagataagc
    38521 catatttttc catcacttca tgacctttag ttatatttaa atcttcaata cttttacggc
    38581 gcgtgttttg aggtgcacca gtataaatca taaatgttgt ttcaccatat tcatgcgctt
    38641 ctatagcaga accttctaac atctttttac cactcattga aacatgtgat cctaataaca
    38701 taaaacacac ctaacctttt ttgttttgct tacgtttttg tctattttgc tgcttactaa
    38761 attgtttacg ctcttgacgt ttcatttttt caacttcttg tttaaatttc ttcttataac
    38821 ctggtttaac tttgttttta attttacttc gaactttgtt cttcacttga ttagttaaat
    38881 ggtcatcttt gcgcattctt gcttgacgct gattgtgcgc tttaacttct tttaactcac
    38941 catctttaat atcaacagta ttgaaaacaa aaccacgatc ttctattaat gaaatattgt
    39001 gttcttcatc aggactataa agcgtaattg ctacaccttt ataattccca cggccagttc
    39061 ggccgactct atgtgtaaag aagtcaatat catttggcac atcaaaattg atgacatgac
    39121 taacaccttc aatatcaata ccacgagatg ctaaatcgct ggcaataacg tattggaatt
    39181 ctaaattacg tatacgtttc atttgttgtt tacgttcacg tggcgttaaa ccaccatgaa
    39241 tcataccaac tttaatgcca gcttcattta gtgaacgtgc taaatcattt gcattatctc
    39301 tactattaca gaaaataata cataagtatg gatttagtat atcaattaaa tttaaagtct
    39361 tttcaacttt agctgcacct ttagtaggta ttaaaaagaa ttcgatgttc tttttatttt
    39421 gttttttact gtcgacagct acatattctg gatgacttaa atatttattt aaaaatggtt
    39481 gtaactgttg tggaattgta gcactaaaca ccgcaatatt tgcattatct tccaatcttg
    39541 cagcaatgta atctacatct tcaattaatc ctaagtcaat cataagatcc gcttcatcaa
    39601 taactaaata tgatgctaag tgcacatgta aatgtcccgt tttagctaag tcattaattc
    39661 tagtaggggt gcctataatc aattgtggtt gtgcattaca acgttgtcta tctttctcta
    39721 tatctgtacc accaataaaa actttaactg aaacgccagc tttaaattgg cttaaatggt
    39781 tcgctgcatc gtatagttgt tgtgcaagtt ctcttgttgg tgcaactacg attgcttgtg
    39841 gttcttttat ttcactatca attaactgca ttaatggtaa taaaaatgca tgagatttcc
    39901 ctgtacccgt ttgagattga ccaattaaat ttgttctctt tagtattctt ggaataattc
    39961 gattctgaat ttcagttggt ttttcaaaat taaggtcttt cacagcgtca attaaactag
    40021 attctagatt aaattgttcg aatggatgtt ttgccatgat ttggcctcct tctatgttca
    40081 tctttactat tataaagtat aaatgtgcta ttttaaataa aaatattaaa acctcgaaat
    40141 ttcaaaattt agaaatcccg agattttagt ttaaatatat tgaaatggat ctgtattaat
    40201 tgtagatgct tcaacatcta tatttatttt ttctgtattg aaccaattca ttagtaacgt
    40261 ttttaaacct tctttcatca catattcgct gtaatgatta atatcaatta agttcacacc
    40321 atgaatttta gcatctaagg catcatgatg tttaatatca cctgtaacaa agacatctgc
    40381 gccttgttga acagcttgat attcatatcc aatacctgaa ccaccaataa ttgcaatacg
    40441 tttaattttc tgattagaca caccaacaaa acggacactt gggatattta atttagattt
    40501 aatatcagct gcgaaatctt ccaatgtcat ttgattatcc acttctgcca taacgccaag
    40561 tccataaagg gatgtttgtt ttatctcaat aaaatcaaat accggtgttt catatggatg
    40621 gtattgttta attaattgct cagcccttga cttttgacat gcatctatca taaattcaat
    40681 tttaacttca tctacatatt caattttatc aatttgtcct attgttggat tagcttcacc
    40741 aactggtttg aattgccctc ttccttcact ttcaaagaaa caatattcat aattaccttc
    40801 ttgtgctaat ccattttcac taagcttatc tttaaatggt ccaacattat ccttaggtat
    40861 atatgtttga actttatagt atacatcttg ttgattattt attattgaaa tgttcttcaa
    40921 tcccatcgcc ttcgccaaca tcatattgac accatgagga tttacatcta aatttgtatg
    40981 catcgctatt aaattaatgt catgttgaat tagttttcta ataatcaaac cataaccatt
    41041 agcttttaat gatgttacgc ctttaaagat tagaggatga tgactaataa tagtattata
    41101 acctttttcg attgcttcat ttactacttc caacgtacag tctaatgctg ttaaaacacc
    41161 agtaactgca acatcttcat cacctattaa caatcctaca ttatcccaag attcagcagt
    41221 tctaaatggc acatgatgat ctaacaatgt cattaaatca gctattttca ttactataac
    41281 accctttcaa ttacagcaat ttcgtcatta atttgagcta aacgttgatg atgttgttca
    41341 gtattgagtt tcgatttaat atgataaagt gcttctaact ctctttgcca tttttttata
    41401 aaatattcat ttttgttgtt cagcaatttt ggtccgaatt tcaattcatc agatgatagc
    41461 tctattaatt gcgtagaata ttctgctaca acaatttcat aaatatggcc tttttcttcc
    41521 attattattt catcaattat ttcataattc aattgttgta atgtttgtct taaattttca
    41581 gtttggatat tactttgtaa aatcaacctt ggatgttgac ttaacttatc ttgcccatct
    41641 tttaaaattt tagcaataag tggtccgccc ataccacaaa ttgtgatatt atcgattacg
    41701 tcctcaggat gaataacact taagccatcc cctaaacgta catcaattct ttctactaat
    41761 tgatttgcag ctacattttt cacagcagct tgaaaagggc cttgaataac ttctcctgca
    41821 ataccgcaat cgcataagtg gttttgaatt gcatagattg gcaaataagc atgatctgag
    41881 ccaatatccg cgattgtacc ttgttttaaa aatcgactta ccgtcgttaa tcggttattt
    41941 aacgaaatca ttttattctc ctttatgaaa aaagaggttg aacattattc aatgtaccaa
    42001 cctcactcaa gttaaatctt aatctaaaaa taaataagcg cttattcatg tcttggtatc
    42061 aatcattaaa attgatataa attaatccat aaagtctttc aaacgtttac tacgacttgg
    42121 atgtcttaat tttctaagtg cttttgcttc gatttgtcga atacgttcac gtgtaacacc
    42181 gaaaacttta ccaacttctt caagtgttct tgttctgcca tcatcaagac caaatcttaa
    42241 tcgtaataca ttttcttctc tatcagttaa tgtatcaagc acatcttcta attgctcttt
    42301 taataattca taagccgcat gatctgaagg actttgtgct tcctgatcct caataaagtc
    42361 tcctaaatga ctatcatctt cttcaccaat tggcgtttct aatgaaacag gttcttgcgc
    42421 aatttttaaa atttcacgaa ctttttctgc tggtaaatcc atttcttcac caatttcttc
    42481 tggtgctgga tctcgaccta agtcctgtaa taattgacgt tgaactcgaa ttaatttatt
    42541 aattgtttct accatatgca cagggatacg aatcgtacgt gcttggtcag caattgcacg
    42601 agtgattgct tgtctaatcc accatgttgc atatgttgaa aacttaaatc ctttgttaaa
    42661 gtcaaatttt tcaacagctt taataagacc catattacct tcttggatta aatcaaggaa
    42721 taacatacca cgacctacgt atcttttagc aatacttaca actaaacgta agttcgcttc
    42781 tgcaagtctt gattttgcta cttcatcacc ttgttcaata cgtttggcta attcgatttc
    42841 ttcttgtgca cttaataagt taacacgccc aatttcttta aggtacatac gaactgggtc
    42901 atttatttta acacctggag gggcactaag atcacttgga ttcagtttct cgtcagtatc
    42961 tgaactatct ttttcattaa ctagtgaaat atcattatca tttaattgat caaagaaatc
    43021 atccatttga tcagagtcga tatcgaaatt ctgaagtttt tcagcaattt cttcatgact
    43081 taaatgaccc tcttttttac ctttttcaat taattgcttc ttaacatctt ctaatgttaa
    43141 tgtcggatca attgtttgtt ttttaatttt aactgtgtta tcagacatga aacggcctcc
    43201 cgattttaaa tatgaacatt cgaaatttat tcaatattgc tattttaaac taaattctta
    43261 attaattcat ccatattttt aattttattt tacaaatagg aactaatccc aatatttatt
    43321 tttcaacagt gttgtttaaa tgcggtaact atcatttacc cttatacatt ttgacataat
    43381 cattattcgt attattcttt aaaatcacat gctacatgcg ttctttattc ttagcaacaa
    43441 tttgctgtaa atagtatttc tgtaattcta catcgccaat ccttgtagct tcccttaatt
    43501 tatgattcaa tgactcaatt gtttcttgtc cgttttcatt aataatattg acataatcat
    43561 caatttcatt ttcatatggt tcgtcattca aactatattg ttctaagcta attagtgttt
    43621 ctctcaactc atttgaatta acatactgta cagcatcact gatattatat tgatcatttt
    43681 ccgcataaaa atcatgtaag acttcgaata catatttaaa atgctgattt gtgaagttat
    43741 ccttatcaac actttcataa taatttaaaa atgtatcttt atctctcatt aaatgtttta
    43801 aaaatgatcg ctccgctttt tcttgacggc tcaaattgtc aaattgtgcc ataccaattg
    43861 gctcaggttc aatgtaaccg ccatactcat cttctggata ataactggct ggtgcttgat
    43921 tgaattgtat ttcgttagct aactgctcag gactaacatt gaaaaatggc gcaacatcat
    43981 ttatagcctt ttgttgtaga attgatgact tcataagtga aatgtcatga ctcagttctt
    44041 tcaaataacg ttcatatgaa aggtcattat gtgcaatttc atcttttaat atactcactt
    44101 tataatgtgc aaatgacttt ttgtcatttt ttacaaaagc agtaaatgcg tcgttgccat
    44161 acttaccaat gtattcatca ggatccatgc cagatggcaa ttgtataaca aatacattta
    44221 gcccttgctg taacaaatgt tgacctgttt taagtgttgc ttcactaccc gcaaaatccc
    44281 catcaaacat taatgttata tttgatgtta actttcgtat aaaggtaata tgttcatctg
    44341 acaactgtgt acccattgtt gcaacaacgt ttttcaagcc agcagtatca gattttataa
    44401 catccataaa accttctagt aatacaattt catctaattt tctaattgat ttacgtgctt
    44461 tatctaagtt atataacaac tttctttttt gaaagatagg tgtttcagga ctatttaggt
    44521 attttggttc ttgaccggta tatgttcgac ctgaatatcc aacaattctt ccttgcgcat
    44581 ttttcaaagg aaacattata cgatttcgaa atctatcgta ataactgaag ttttcttcgt
    44641 tacgtgataa taatccggct tcatatgcta attcaatatc gtaacccttt ttttgaagaa
    44701 aatcatgaca aaaatgtgag ctatcgggtg caaagccaat gcctcgctct ttaataagcg
    44761 catctgtaaa accacgttct tgtaagtatg ttaatgcttg ttcgccttcg actgtctttg
    44821 ttaaagcgta ataataaaat tcttgtatta actcatgcat ttcaatcatt tgtaaatcat
    44881 cagaagcaat ttgaacattt gagttagatt gtgttgcctc aatatctaca gcaacattaa
    44941 ctctatcacc taattcttta accgcttcaa caaatgatat gtctttaatt tcttgagtaa
    45001 attgaaaaac attgccacct tttttacaac caaaacaatg acaaatttgt ttatcttcag
    45061 aaactgtaaa tgaaggtgtc ttttcatcat gaaaaggaca caaacctata taattgcgtc
    45121 ctctcttttc taattttaca tattcactta ccaagtctaa aatgtcggtt ttatctttta
    45181 tttcattaat gatcgattga tctattcgca aattaaatca cctattaagc attagttata
    45241 ctattatacc taatttttga caaaaatgaa atcatttcga tttattttgt tcaatataat
    45301 ggattatatc gtttgctgtt tcttcgattg ctttttgaga aacatcaatg acaggacatc
    45361 caatttcact tacgatttct tcaaagtaat tcaattcttc ttggattcga gcttctgttg
    45421 cataacgagc tgtgtcacct agtcctaatt gttttagtcg ctcttttcta atgcgattta
    45481 atttttcttc acttatttta agtgcgatac atttctttgg atcaatatca tataagccat
    45541 ctggcggtgt cacttctggt acaatcggta cattcataac tttgtaactc ttatgcgcta
    45601 aatactgaga taatggtgtc tttgaagttc tcgaaatacc aagtaaaaca atatcagctt
    45661 taggtaatcc tttaggatct ttaccatcat catatttaac tgcaaactct atcgcatcaa
    45721 ttttcttgaa atatgcatca tctaatctat gaacgatacc tggctcatta taaggttttt
    45781 cttcaaccga tgctgataat aaatccatta atggccccat aatatcgacg gacttcaatt
    45841 ggaattctgc tactttctca ctcatatatt gcttcatttc aggtttaata agtgtataaa
    45901 caatgatagc atttgtatct ttagcaactt gaatcacttc atcaacatct tcaaaagatt
    45961 caatatacgg atatcttaat aattcatttt tacattgctt aggattaaat tgtgaaatac
    46021 ctgccctagc aactaactct gccgtttcac ctatagaatc tgaggctacg ataattttaa
    46081 ttttttccat tacttctcac ctattcttta tataatgcta ctaataactt agctattgtt
    46141 gttttggaaa ttcttccaat tacttcatac ttttgattat ctttttttct tacaattgga
    46201 atcgaatcaa tttctttttc aatcattcta tctgctgcgt atatgactaa ttcgctttcc
    46261 tctaaataag tgacattagg catacgtgtc atatttacac tgataggtac tgtatgaata
    46321 tctgctccaa tcattgaagc tcttaataaa tcttttcttg aacacacacc aacaaaatcg
    46381 ttatcttcat taataataaa taatgtactt acatcttcta aaaaaattgt acaaatagcg
    46441 tcataaactg ttgtattctc tcttagcaca acaggttgag acatatagtc cttaacctca
    46501 aattgtcgaa gtttttcatt aaaaaattta ccttttgatt tacctgaata ataatatcca
    46561 actcggggac gcgcttctaa aaaacctgac attgttaata tcgctaaatc tggtctgagc
    46621 gttgctcttg ttaaattcaa cttatctgct atttgttcac cagtaatggg tccttgagtt
    46681 ttaacaattt cgatgattcg ttcttgtctt tgactgagtt ctataggtct tcaccccttt
    46741 tttattcact tattattata ccgatatttc tttcatgtca caaacacatt aattttactt
    46801 gcctttaaat aatctatcaa ttagaataaa cgtacagcga gttaaggata gtgtaagctt
    46861 aacaataaga ttggcgcaac gaatcatttt aaaataaaag cgagtgacta cactaatttg
    46921 ggtggaaccg cgggttaaat acgtaactta ttttgtatta tatacaattt aaaatattaa
    46981 ctcgtcccat ggaagtaaag catatttact atgctgttat tttccatggg gcgttttcat
    47041 gtatgaggag aggtaattat ggcaaaagat atggatacaa ttgtttcatt agcaaaacac
    47101 agaggttttg tgttccctgg tagtgatatt tacggtggtt tatcaaacac atgggattat
    47161 ggtcctttag gtgttgaatt aaagaataat gttaaaaaag cttggtggca aaaattcatt
    47221 acacaatcac cgtttaacgt tggtatcgat gctgcaatct taatgaatcc aaaagtatgg
    47281 gaagcttcag gacacttaaa caacttcaac gacccaatga ttgataataa agatagtaaa
    47341 attcgatatc gcgctgataa attaattgaa gattatatgc aagatgttaa aggtgatgaa
    47401 aacttcattg ccgatggttt aagttttgaa caaatgaaaa aaattattga cgatgaaggt
    47461 attgtttgtc ctgtaagtaa aactgctaac tggactgaaa ttcgccaatt caatttaatg
    47521 tttaaaacat tccaaggtgt aactgaagat tctacaaatg aaattttctt acgtcctgaa
    47581 acagcacaag gtatttttgt aaactataaa aacgtgcaac gttcaatgcg taaaaaatta
    47641 ccgtttggta tcggtcaaat tggtaaatca ttccgtaatg aaatcactcc aggtaacttc
    47701 attttcagaa caagagaatt tgaacaaatg gaacttgaat tcttctgtaa acctggtgaa
    47761 gaaattgaat ggcaaaatta ttggaaaact tttgcaagtg actggttaac aagcttaaat
    47821 atgagcagtg aaaatatgcg tttacgtgat catgatgaag atgaattatc tcattactca
    47881 aatgcaacaa ctgatattga atataaattc ccatttggtt ggggtgagtt atggggtatc
    47941 gcaagtcgta cagacttcga cttacgtaaa catgctgaac actctggtga agatttcaga
    48001 taccatgatc cagaaacgaa cgaaaaatat attccatatt gtatcgagcc atcacttggt
    48061 gcagatcgtg taacattagc tttcttatgt gatgcatatg atgaagaagg cgttgaaggt
    48121 agcaaagatg cacgtacagt tttacacttc catcctgcat tagcaccata taaagcagcg
    48181 atcttacctt taagtaagaa attatctggc gaagcgatta agatttttga gcaattaagt
    48241 tctaaattct caatcgattt cgatgaatca caatctatcg gtaaaagata ccgtcgtcaa
    48301 gatgaaatcg gtacacctta ttgtgtaaca ttcgactttg attcattaga agataatcaa
    48361 gttacagtac gtgacagaga ttcaatggaa caagttcgta tgccaatctc agagttagaa
    48421 gctttcttaa ctgaaaaaac aaaattctaa ttaaaaagac tctccaccat atgtggtggc
    48481 tatataattt ataaaaagag atactggtta gtaaaattgc cagtatctct tttctattcg
    48541 aaaaaggtat tcaaataaac acatctatgt ggctacttga atacctttta ttattttatg
    48601 ttattgttcc aatcttttta attggttgat tagtttctga cttttaaaaa acatacctgc
    48661 atattcacga tataacatta aaatgatatc tgacatttca tcaataattt cttgatggat
    48721 attcaatgaa ttcattttat ctattggtaa tttttgtaat acatctaata aatatagtgt
    48781 tttgttcgat aatataactg catgtacatc tttagaagcc tcttgccttg aaatcgcacc
    48841 gtcaaactta aaactataac ctattaaatc agcttgtgtg tcattaccac tcacagcaca
    48901 gcgattaaat gatgcggtaa aaccaaatcg tttcatacac tttaacataa caacgactga
    48961 cattaactgt gcagatgtac ctgattctat tttttcaaga acaaattgta ataattgata
    49021 gttatatggt gcaatgtcac cttcatccat tgagcgctca atagtttcag ctaccagaga
    49081 cgcataactg cttacgtaaa ggtccatttg taatttataa tgttgactaa taacatctac
    49141 agaatttaac gttcccatac ctcgccactg attgtaaata aacaaaccat aaacaaacaa
    49201 ttgcgtttgc gcttgtaaac ccgtcttaac ttttttagca cgccttgcca taagtggtac
    49261 ttttgcacca tgctcattta aaatcgtgat aattttatca gattcaccat aatcaactgc
    49321 tttgatgata atcccttttt ggcgcattaa caattatctt caccactttt aagattaatc
    49381 ttggtcttca acataaccaa tttggcgaat aaagttaact ttgtttcgcc agtctctttg
    49441 aactttgacc cataattcta agtaaacttt agagcctaga agcatttcta tatcacgtct
    49501 cgcacgtttt cctacttctt ttaacttttt accgcctttt ccaatgacaa ttcctttttg
    49561 cgaatctctt tcaacatata tagttgcttc gatatgaaca cgatcttcgc tttctttaac
    49621 catacggtcc acattaacac caatcgcatg agggatttct tcacttgtaa gatgaaggat
    49681 tttttcacga atgatttcac ccactacaaa ttgttcagga tggtctgaaa tttgatcatc
    49741 tggataatat ttaggtcctt cgggtaaata cgtctttaat acatcaataa aatgatctac
    49801 atttagccct tctaatgctg aaataggtac aatctctgta aagtccatat aactttgata
    49861 ttcttcaatc tttggcatta attcatctgg atgcactaaa tctattttat ttaatactaa
    49921 aaatactggt gtcttaacat ttttcaacat ttctataata tattcatcgc ctcgtccaat
    49981 ttcctcattg gcattaacca taaacatgat tgcatctatc tcagataatg tatttttagc
    50041 gactttcatc atatagtcac ctaatttgtg tttaggttta tgaatacctg gcgtatcaat
    50101 gaatataatt tgcgcatcat ctcttgtcat tacaccttga attttatttc tagttgtttg
    50161 agctttatcg gacatgattg ctattttatg gccaatcact ctattaacaa atgttgactt
    50221 ccctacgttt ggtctaccta taattgaaac aaatcctgat ttatgttctg tcatttattc
    50281 taaatccttt cctgaaaatc caaatggtag taactctgcg actgtcatca taaccatatc
    50341 tcctttatga tttgtcatat acacaggcat atcatcatca cataattcct tcaaaacttg
    50401 acgacatgca ccacaaggtg atgacggttt atctgcatct acggttacag ttattgattc
    50461 aaaatcacct ggtctgtatc cttgagaaat tgccgatacc aaactagctc gttcagcaca
    50521 tatcgataat ggataagaag cattttctac attggtacca taaaaagttc taccgtcttt
    50581 cgtttttaaa taagccccta ctttaaaatg actgtatggc gaatatgatt cttgttgtgc
    50641 ttttctaact tcttgaaaat aatgaggttg ataactcata tatgcctccc taaaataacg
    50701 ctataaaatg tggtaaaaat actattaaac ctataataaa tgctaatatt gaaactataa
    50761 gtacactaaa agccgctata tctttagcgt atttagctaa atcatgatat tcagcggtca
    50821 ctaaatctac aacatattca atagcagtgt ttaaagcttc aacagtgaga actaatgcaa
    50881 tagcaatgag tataaatatc cactcaatcc gattaatatt tagtacgaga ccaaagacaa
    50941 tagcaacaat cattgcaaac acatgtaaaa gaaatttata gtctttttga attaagattt
    51001 tcagcccatc aagtgcatat ttaaaccttt tcataattag tctcgtgtta atccatatgc
    51061 gtttaatatt gtatcttgtc gaccaaacat ttccttttca tccgtttcag tcatatgatc
    51121 ataacctaat agatgcaaaa atccatgtaa tgctaaaaat cctaattctc gttcaaaaga
    51181 atgtccataa ttgtttgctt gttcttgcgc tacatccgta cagataatta tatcccctaa
    51241 aacacgtggt atatcaagat cactataatc aatatctggc tcatcttctt ctaaagcaaa
    51301 tgagattaca tctgtaactt tatctttatc tctatatgtt cgattaattt cttgtatttc
    51361 ttgtttatct acaaatgtaa cagaaagctc agcatcgtct tctatatgct cttctttttt
    51421 ggcaaattct aataaatctt caatttgttt ataccaagca tctttaacta agcctgtgtg
    51481 atcgctaaaa tctatcgtaa acatttaatt ctctccttca taatgttcaa tgatcttact
    51541 taccaatgga tgtcttacta catcgctctg atctaatttc aatatactta tacctttaac
    51601 gttgtgtaac ctactgaccg cttccttaag tccactttta acacctttag gtaaatcgat
    51661 ttgagtttgg tcaccagtaa ctaccatttt tgagccaaat cctagtcttg ttaaaaacat
    51721 tttcatttgc gcatgtgtcg tattctgcgc ctcatcaaga attacaaatg catcttctaa
    51781 tgttcgtccg cgcatatatg caagtggcgc tatttcgata atgcctcttt caataaatcg
    51841 ctctgtttgt tcacgcccaa gaacagtata tagaccatca tataaaggtc ttaaatatgg
    51901 atccaccttt tctttcaaat ctcctggtaa aaatccaagt gactctcctg cttcaacagc
    51961 aggtcttgtt aatacaatac gtttaacagc acctttacgg agttgctttg ctgcataaac
    52021 tacagctaag aatgtcttac ctgtaccagc aggacctata ccaaatacta aatcattatt
    52081 tttcatggca ttaacatata tacgttgccc catcgttttc gcacgaatcg tcttaccaaa
    52141 tgcatcctta gttatctctt catcatataa atctaacaga tgttgaattg tgttattatg
    52201 tgccatttta atagctgctt caacatcttt aattgtaata ttattaccta aatcaataac
    52261 cttcagcaaa ttgattaata ctgattccgc tttttctacg ttttctattt ttgtaccttt
    52321 aacggcaact tcttgtcctc ttgcatggat gacaacatcg aaactctctt caattgcttt
    52381 taaatgttca tcattatttc caattaaagc ttgagattgg ttcatatcgt ctatttgtat
    52441 aattccaggc atacacgcgc tccttttcat atatcattta tattcattct atgatgcttt
    52501 aatatctact taattatatc atgcaattga ttgatttaaa catctttgca ttgacttact
    52561 catttttctt taatttaaaa taatcattta tacttttcac cttgtcataa aagcagattc
    52621 aattttagac taatcaatat tttgttgtaa tttaaataac taatatttct cgaaagattc
    52681 tctttgtttt tcaatttttc ttaacgtaaa aaaacaagca actaccatta cgatagtgct
    52741 tgttttcaaa aaaatttata attgttttgg tttagctaaa atttctgacc atatcatacc
    52801 attgattact tcatctttat caaattggaa cgctgattta gtcaaatctt tttcgacatt
    52861 ttgagaatta agcaactgct ttaatttcaa acgttttgta cgttcagata agtatttatc
    52921 ctcaataata tctctagcac gtttttccat tttagcaatt tgcttttctt tttctctatc
    52981 aatgtcagta cgaatcgttt taatatcatc tctaagtgat ttttctaatt gacgtctaat
    53041 ttcgtcagaa ttatcttgtc tagaaggtct atgtttctgt tccaccggtt ctactttagg
    53101 cactgtaatt ggtttctctg tcatcggttt tgtctcttgt tgttttttag gtgccatagg
    53161 ttctacaaca ggtttcgatt taggctcttc ctttggaagt tcatcgaata aaggtggtaa
    53221 cgtatcatca tattttcgtt tcgatgattt cttttcttct tcatttaatt cttcacttat
    53281 ttctttaaac gttcgctcaa tttcttcaaa aaagccacct ttttttggtt cattatcggt
    53341 agaagttttt tgaggtggct tttgattttg tctatcttta tgactatttt cgcgcatagt
    53401 agtaatgata gaaatgatca ctgatatgac aaaaattaga ataccgacac tcatttaatc
    53461 acctctcgac ttaatgttca ggtgactcat catcactttg atcagttcgt ttattaattg
    53521 catttctcat gcctgtatca gcttcgatat ttttcaaatt ataataatct ttaacgctga
    53581 tattacctga acgtaatgct tcagccatag ctaatggtac ttcagattcg gcttcaacta
    53641 ctttagcatg catttcttgt acacgcgctt tcatttcttg ctcagttgct acagccatag
    53701 ctctacgttc ttcagctttt gcttgtgcaa tatttttgtc tgctaatgct tgttcagttt
    53761 gtaagtctgc accaatattt ttactaatat caacgtcagc aatatcaatt gataaaattt
    53821 caaatgcagt acctgaatct aaacctttgc ttaatactgt tttagaaata ttatctgggt
    53881 tttcaagtac ttctgtatga tgcttactag aaccaattgt tgaaacgata ccttcaccaa
    53941 cacgtgcaat gattgtttct tcaccagcac caccaacaag tcgagcaata ttagctctaa
    54001 ctgtgatacg agctttggct ttcacttcaa taccgttcat tgctacacct gcgataaatg
    54061 gtgtttcaat gactttagga ttaacagaca tttgaaccgc ttctaacacg tcacgtcctg
    54121 caaggtcaat tgcagcagca cgttcgaaag gaagatcaat gtcagcacgt tgtgcagcaa
    54181 tattagcgtc aacaactctg tccacatttc ctcctgctag ataatgcgat tctaattggt
    54241 ttgttgttaa tgcaagtcct gctttatgcg ctttaattaa tggcgctata acttttcttg
    54301 gagatacacg acgtaaacgc ataccaacca atgtacctat accaacatga acgccagctg
    54361 ctaacgctga aatccataaa ccaatcggta caaatgagaa taaaataagt aatgcaacta
    54421 ctataataac tgctattacg ataaaactta aactaaacat ggtatcgctc cttttaatta
    54481 atctacttcc ctcacaacta ctcttgttcc ttcaacttca aggattttta ccgttttatt
    54541 gcgtaaaata aagttgccat ctgaaacagc atcaatacgt tcattttcac aaaaaataat
    54601 ccctgctggt cgaagatctg taactgtttg agcagtcttt cctacgaggt gcgagcggtt
    54661 atcatgagaa ttgtaacctg actcagaatt agttgaatct tttaagataa ctttatccaa
    54721 aaacggaatc tttctgttga aaatcttcac taatatcacc cattctacaa tcgttaaaat
    54781 caaggcaacg ataacattcg caagcataaa tagcaaatta tcaccgagcg ttgttatgct
    54841 tatagttatc agtatcatgc caataatacc aattactgca ccaactacaa ataattcaat
    54901 tacaactaat ataacgccaa ttgagaatat taagatagaa tgcatattga catttccttg
    54961 gattagaaat cccaaaaata aaataagtaa tgataatgtg gcgataatac cagctgcatt
    55021 gattttttta gagtaaagtt gatatacaaa tcctaagaat gtcaaacagg ttaatattaa
    55081 cgtaaaaata ggttgaacaa ttatattact aacttgttca acccaagtat ctccagccgt
    55141 tgattccaag atagttgtca tttgtaaaaa attattataa ctcacaattt cacctcgccc
    55201 tcacattaat tatacatgaa attgaatata ctttatagtt ataagaacct atagaatatc
    55261 aatttgatta tttataaact atataacttt ttttaattaa aaattgacaa caaaaaaaca
    55321 tcacatatta gtgtcagaca ctaacttgtg atgtttgttt tatataatta atattcgtgt
    55381 tgagggagtc aacagaggta ttaattattt gaatttacgt ttacgtgcag cttctgattt
    55441 ctttttacgt tttacgcttg gtttttcgta aaattcacgt ttacgtactt cttggattgt
    55501 tccactttta gaaactgaac gtttaaatct acgtaacgca tcttcaagtg attcattttt
    55561 acgtactact gttttagaca tctgtatttc cctccctcca aatatcaacg gaactttata
    55621 gtcaattgca cagtaaaact atgcatttat aagtataata tatctgtaat ttatggtcaa
    55681 ttagtaaatt gttttttatt tgaaacatat ttcacatcaa aatcacaaag acttttagat
    55741 tttgttctaa aaatctctta ataatttatt taatgagaag agttgcttat atagtaaatt
    55801 gtgaagccgt taaaacaacg ttacaaaacc tatatcttta atacggaacc ttatggtatg
    55861 aatcaaggaa tacttaaact aaaacttctc tatcagattt atttgttgcg aaatcaacaa
    55921 ctttaattgc ttgcccttca tttaatggat aatttgcttg cgtaatttta acttttacaa
    55981 tttgacctat gagtgattcg tcaccttcaa attgtacttt catataatta tctgcatatc
    56041 caactaatgt accttctgtg tcaccctgtt cctcaggaat tacttcaagc acatcttgat
    56101 caaatttaga cgcatataac tttccgagtt gattgcttag cgtaattaac ttatgcacgc
    56161 gttcattttt aatttcttca tcaatttggt catccattct tgcagctggc gtgccaattc
    56221 taggagaata agggaaaaca tgcagttcag agaacttatg ctttacgata aaatcatatg
    56281 tttcttggaa ctcagcttca gtttcacctg ggaaaccaac aattacatca ctcgtaactg
    56341 ccaagtctgg taaagcttta tgcaattttg ttaatcgttc tgaaaatcta tccattgtat
    56401 acttacgtct catacgtttt aatactgtat ctgaaccaga ttgtaatgga atatgcaaat
    56461 gacgcacaac ttttgttgaa cgttctaaaa catcaattac ttcatctgta agttgacttg
    56521 cttcaattga agaaattcga attcgttcta atccattaat cgtttcaaga tcacgtaata
    56581 attgggccaa gttataatct tttaaatctt gaccatatcc acctgtatga attcccgtca
    56641 atacaatttc cttatatcct gaattcacta gttgcgtcgc ttgttcaact actttttccg
    56701 gatctcttga acgcattaaa ccacgagccc atggaataat acagaatgtg cagaagttgt
    56761 tacaaccttc ttgaattttt aatgacgcac gtgttctatc tgtaaaataa gggacatcta
    56821 attcttcata tttacgattt ttcatgatat ttccaacacc attaattggt tggcgttctt
    56881 tacggaattc gtcaatgtaa cctaatagtt tatgtctatc ttgtgtacca actactacat
    56941 cgacaccagg aatttccata atttcagctg atgaagtttg cgcataacaa cctgttacac
    57001 agattacagc atcaggattt tgtcttattg cacgtctaat tatttgacga ctttttttat
    57061 cacccgtatt cgttactgta caagtattaa taacaaatac atcagcattc gcttcaaagt
    57121 caacgcgctc atagtttgct tctttaaata attgccagat tgcttcagtt tcataatggt
    57181 ttactttaca acctaatgtg tgaaacgcaa ctgttgacat aaatattcac cccattaatt
    57241 ctttttcata acttattgca cttaacgcat acaatggcgc agtttctgcc cgtaaaattc
    57301 tcggtccaag accaacaact gtactagtat tactaaataa tgaaatttca ttttctgaca
    57361 aaccaccctc aggaccaaaa atcatcaaca ctttatcctg agccttgaat tgttgtaaag
    57421 tttgcttgaa attgcttaac tcaccatctt ttgcttcctc ttcatatgca ataagaatat
    57481 agtcataatt atcaatagta tcacaaatta attttaaatt cgactcgaat tgaatagatg
    57541 gaatcactaa acgatagctt tgttcagcag cttctttaat tattttttgc caacgctcta
    57601 tctttttggc aacttttgcc tcgtttaatt taacaattga acgttccatg ctaacagcta
    57661 taaatgatga agcacccaat tcagtagctt tttgtagcaa ccactcatat ttgtcagctt
    57721 taattagtcc actgcaaatc gtaacatcaa ctggcaattc tgtattaata ttttgttttt
    57781 cttttaaatc aactgcaatt ttatcacttg ttatatcagc aatttcacat aaataaactg
    57841 tttgatcatt aaaagttaaa ataattttac taccaacatc atatctcatt acatttgtta
    57901 tatgatgaat atcttctttt tttgtaataa aaaaacgctg acttacatca gcgttttggt
    57961 ctatgaaata acgttgcaca ttattcactc actttctggc caacaagaca aacccaaccg
    58021 ttgtcatgtt gttctgaaat aattttaaaa cctacacgct ccatatgtga ctgtatacct
    58081 tcatacttct cttttataat accagaagta ataaaataac cgccttcatt tagagtatta
    58141 taagcatctt caatcatttc atcaataata tgcgctaaaa tatttgctat tacaatatca
    58201 aatttttctg tttcgtcttt caataagtta cctggaacag cttcaattaa cgtttcacaa
    58261 tgatttcttc tgaagttttc tttagctaca ctcactgcca tttcatcaat atccaacgct
    58321 ttaatacgtt ttacaccgat tagatgactt gcaatactta atatacctga gccagtacca
    58381 acatcaatca ctgaatgctg tggcaataca tatgtttcta ttgccttcaa acacatactt
    58441 gtagtcggat gatcgcctgt tccaaaagcc atacctgggt cgagctcaat gcaaagctct
    58501 tcatccgctt ctttagcata tgtttcccaa ctagggacta ttgtgaactt cttcgacgct
    58561 cggaatggat ggaaatagtt tttccattca ttttcccaat ccgtttctgc aatgatttgc
    58621 tcactgaatt gaacgttatg ttgatcaagt tcatctaaat ttaataactc atctttaatt
    58681 cgctgtcgca acttatcatc ataagtcatc tcattaaaat aggctttcaa tcttactccc
    58741 ttatctggat aatcctcttt tttcaaagcg taaatttcac cgtatttatc ttctggttga
    58801 ttaattaaat catctgaatc ttctatcacg acaccatttg atccatgatt ttcaagtata
    58861 ttggtagcca attctactgc ttcatgatta ataataattg aaagctctgt ccagttcata
    58921 ctttattctc ccttaaagaa tctttttgct ctatctttaa aattcgaagg ttgttcatta
    58981 atttcttcac catttaattg ggcaaattct ttcattagtt ctttttgtct atctgttaat
    59041 ttagtaggtg ttactacttt aatatcaaca tataaatctc cgtatccata gccatgaaca
    59101 ttttttatac ccttttcttt taagcggaat tgcttacctg tttgtgtacc agcagggatt
    59161 gttaacataa cttcattatt taatgttggt atttttattt catcgcctaa agctgcttgt
    59221 gggaagctaa catttaattt gtaataaata tcatcaccat cacgtttaaa tgtttcagat
    59281 ggtttaactc taaatactac gtataaatca ccagcaggtc ctccattcac acctggagag
    59341 ccttcgccag ctaatctaat ttgttgttca ttgtcgacac cttcaggtac tttcacttct
    59401 aatttaactg ttttattttc agtacctttt ccgtgacatg ttggacaagc ttcttcaaat
    59461 tcttgaccac ttccattaca tttaggacaa acttgttcag tacgaactct acctaaaatt
    59521 gtattttgtt ctacagctac atgaccagcg ccattacagt aactacaagt ctttttactt
    59581 gttccaggct ttgcaccatc accatgacat gtttcgcatg ttacatcttt acggattgaa
    59641 atttcttttg ttgtaccaaa taccgcttct tcaaatgtca atgtcattgt atactgaaga
    59701 tcatcacctt tttgcggtgc atttggatct ctttgtctgc cgccaccgaa gaaagagcta
    59761 aagatatctt caaaaccgcc gccaccgaag ccactaaaac cgccaaagtc agagccattg
    59821 aatccttgtc caccaaaacc ttgtggcccg tcatgtccaa attgatcata gcttgcgcgt
    59881 ttattatcat cacttaaaac ttcataggct tcagaaattt ctttaaactt ttcatctgca
    59941 ccttcttctt tgttaatatc tggatgatat tttttcgaaa gctttcgata cgcttttttg
    60001 atttcatctt ttgaagcatc tttactaatg cctaaaactt cataatagtc tcttttggcc
    60061 acagctatct ctccttttct taattaactc atatagttta acgtaatatg tcatactatc
    60121 caaataaaaa gccaaagcca atgttctatt gactttgact tttcagatca tgacaacatt
    60181 ctaattgtat tgtttaatta ttttttgtcg tcgtctttta cttctttaaa ttcagcatct
    60241 tctacagtac tatcgttgtt ttgaccagca ttagcacctt gtgcttgttg ttgctgttga
    60301 gccgcttgct catatacttt tgctgataat tcttgaatca ctttttcaag ttcttctttt
    60361 ttagatttaa tatcttctat atcttgacct tctaaagcag ttttaagagc gtcttttttc
    60421 tcttcagcag attttttatc ttcttcaccg atattttcgc ctaaatcagt taaagttttt
    60481 tcaacttgga atactaggct gtcagcttcg tttcttaagt ctacttcttc acgacgtttt
    60541 ttatctgctt cagcgttaac ttcagcatct tttaccatac ggtcgatttc ttcgtctgat
    60601 aatgaagaac ttgattgaat tgtaattctt tgttctttat ttgtacctaa gtcttttgca
    60661 gttacattta caataccgtt tttatcgata tcaaacgtta cttcaatttg aggtttacca
    60721 cgttcagctg gtggaatatc agtcaattgg aatctaccaa gtgttttatt atccgcagcc
    60781 attggacgtt caccttgtaa tacgtgtaca tctactgatg gttgattatc tactgctgtt
    60841 gaatagattt gagatttaga tgtaggaatc gtagtgttac gttcaattaa cgtattcata
    60901 cgtccaccta aaatttcaat acctaaagat agtggtgtta cgtctaataa tactacgtct
    60961 ttaacgtcac ctgtgataac gccaccttgg attgcagctc ccattgccac tacttcgtct
    61021 gggtttacac ctttgttagg ttctttaccg atttcttttt tgacagcttc ttgtaccgct
    61081 ggaatacgag ttgatccacc aactaagata acttcatcga tatctgaatt tgttaagcca
    61141 gcgtctttca ttgcttggcg tgtaggttcc attgttcttc taattaatga atctgataat
    61201 tcctcaaatt tagaacgagt taagtttact tctaagtgta atggaccgtt ttcaccagct
    61261 gagataaatg gtaatgagat ttgagtttgt gatacacctg ataagtcttt tttagctttt
    61321 tcagcagcat ctttcaaacg ttgtaatgcc attttatctt gagataagtc tacgccattt
    61381 tcctttttga attctgcaac taggtagtca ataattactt ggtcaaaatc atcaccgcca
    61441 agtttgttgt caccggctgt tgatagtact tcgaatacac cgtcacctaa ttctaggata
    61501 gatacgtcaa atgtaccgcc acctaagtca aaaacaagaa ctttttcatc tttatcagtt
    61561 ttgtctaaac catatgctaa tgctgcagct gttggttcat taatgatacg ctcaacttct
    61621 aaaccagcaa ttttaccagc atctttagtt gcttgacgtt cagcgtcgtt aaagtatgca
    61681 ggtactgtaa ttacagcttt gtcaactttc tcacctaaat agctttcagc tgtatttttt
    61741 aagttttgta aaatcatagc tgagatttct tgtggtgtgt atgatttacc ttcaatatct
    61801 actttataat cagtacccat atgacgttta atagattgaa cagtatttgg gtttgtaata
    61861 gcttgacgtt tagctacttc accaacttga gtttctccat ttttgaaagc tacaacagat
    61921 ggtgttgtac gtgaaccttc aggattttga attacttttg gctcatcgcc ttctaatact
    61981 gttacacatg aatttgttgt acctaagtct ataccaataa ttttactcat aataaaattc
    62041 ctccatttaa tcattaaatt aatttgattt taaacaatgt cgtttcgcca aatttaagtt
    62101 attggtttac tttgaccatt gatggtctta atactctatc tttaagcttg tatccttttt
    62161 gtagttcttg agtgatttcg ccagattcaa aatcagggtt atcatcttga actacagctt
    62221 ggtgaatatt tggatcaaat gcttcacctt cagttttaat aacttcaaga ccattatctt
    62281 ttagtgcgtt aatcaaactt tcatgcacca tttgtacacc tttttgaaga gatttaaaag
    62341 tctcatcatc accttcaatt tgaagtgcac gttctatatt gtctattgct ggtaaaatat
    62401 ctgttaacac acgttgtgct tgatatgttt tatttatttc attttctttt tgaattctac
    62461 gcttataatt ttcaaactca gcgtagagcc ttaaatattt ctcttcgttt tcatctgcta
    62521 attgttgaag ttcattaatt ttttgatctt ttggatctat ttcttcaata acattctcgt
    62581 cagacgtttc ttctattgct tcatcttgta aatgaccttt actttcttca gtttgttcaa
    62641 ctgaatcatc aatattttgt ttgacgtttg tttcttcaac tgttgattca gtgttttttt
    62701 caactgattc gtctttattt gtcattttct gtcctccaat actttctaat ccatcattac
    62761 caaattctat ttaataattg aatgacattt tgataatgca tagctgtagg tccaatcaca
    62821 gcgatttgac cttttaacgt ttcatcaaaa tgatattgac ttgttacaat tgaaatatca
    62881 cttaagctgt catcaatttc attaccaatt tttacattaa tatttggtga agatatatct
    62941 tgtaataatt ctgcaattct atttgattct atatattgta gaatgggctg aattgaagat
    63001 acattagttt cattcaatgc atcaataagt ttaacctttc cacccatata aatgctatta
    63061 ctttgattag aaatatgatt attcatcgta tttaacaatt tattgataaa tatttcttcc
    63121 tgctctgatt gaacaaaaga gacaatatca tcttgtaaat tctgattaaa ctcagttaat
    63181 ttgttagtaa caaaatttga tattgtattt agtttatcat tactaaacgg tatgtctgaa
    63241 gcaagatgta catgctcaac atgacctgat gaaaatacga taaccattat aactaaatta
    63301 ggattagcac gaatcaaatg tacattattg ataatatctt gtttatgatt aggatgaaca
    63361 actaaagttg tatattgaga tatatttgat aattcatctg caaaatatgt caatgctgat
    63421 gatacatcat attgattctc aactaacaat tgatttaatc gtcttaattt atttgttttt
    63481 tgatgagatg tttgttcaag taaacgattg acataatacc taaaacctaa ttgtgatggc
    63541 gaacgccctg aagaactatg cgtcttttcg atatagttca aatcttcaag ctgtttcatc
    63601 tcatttctaa ttgtagcagg actaacattc aagttatgtc gctcaattag tgttttagaa
    63661 ccaacgggtt gtccaaaatc aacataatcc tcaacaattg cgtttaatat actcaattgc
    63721 ctatctgtaa tcatgttttc acctcattag cactcactta tctcaagtgc taattataat
    63781 ttatcaaatt ggtcaaagta agtcaatgtt aaagactcga aatttcaaat tttttaatca
    63841 tttatcagga aagcttcaaa aacctcatta ccaatgactt tccctcgatt tgtaagtgca
    63901 atcgcatcgt tcttttctac aattaatttc ttctctttta aattatttat tgtttgacca
    63961 aagacacttt caatagattg gtcaaacttc tttttgaacc ttctactact cacaccttca
    64021 tttaaacgca acccaagaaa catttcttct tccattctct cagtcaaaga aggtttattt
    64081 gatactaaaa ttgctttatt ttctttattt atagctttga tataatgatt cactggattg
    64141 atattcgtat aacgaacacc atctacataa ccacttgcac ctgctccaaa tccataatat
    64201 tcctcattaa accagtaaac cttattatgt tctgattcat ggccatctaa tgcaaaatta
    64261 gatatttcgt attgatggaa aggagattgt tctatcttag acatcagcaa ctgatacatg
    64321 tcagcaccta aatcctcatt aggaagtttg agcaaacctt ttctatacat attataaaat
    64381 tgggttttag gttcaagtat taagccgtaa ctcgaaatat gttgaatttc catatctaaa
    64441 gctagatcta agctttgttc aaaatcttca atcgtctgtt tcggtaaatg atacattaaa
    64501 tctaaactga ttgatttaat acctgcgttt ttagcattta acaccgaagt gtaaatatct
    64561 tcagtattgt gcgttctacc taaaacagac aataactccg gcttgaatgt ttgaacgccc
    64621 attgaaattc tgtttactcc atatttctct aatagttgga ctttctcttt agttaactca
    64681 tcaggatttg cttcaaatgt atactcgcct gtgattgtaa acgtatcacg tattgcttta
    64741 agtaatcttt ccaactgatt aatagaaagg gccgttggtg tgccgccacc tacatacatg
    64801 gtctttaagt tcctatattt tgctgtagac atttctgtga ttagtgcatc taagtactca
    64861 tctacaggtt gattctgtat aaaatattta ttgaaatcac aatatgtaca tattcttaca
    64921 caaaatggaa tatgtatata tgcactttgt accgtcattt taatgccccg cttctcagac
    64981 tttttatcca attggctata tcctgttgga ctatctgcaa ttattcttac ttttaacttt
    65041 aacgtttaat caatgattgt ctaatatatc gattcacttt aatatttata aatgttaaga
    65101 gagagtgaga tagaaataat aaagaaccac taatgattta ttatgtagtg gctcttacac
    65161 attagccaga ggtaatatgt acttaaaaat agaattacat gagttaaatt catgcataag
    65221 aaatactaat ttctaaagaa taagtatttc tttatgttgg ggccccaccc caacttgcat
    65281 tgtctgtaga aattggaaat ccaatttctc tgtgttgggg ccccgccggc aaggttgact
    65341 agaattgaaa aaaagcttgt tgcaagcgca ttttcattca gtcaactact gccaatataa
    65401 cttcgtagag catagaacat tgaattatgt cccagcctgt ttatgttggg gccccgcgaa
    65461 cttgcattgt ccgtagaaat tggaaatcca attcctctgt gttggggccc atccccaact
    65521 tgcacattat tgtaagctga cttttcgtca gcttctgtgt tggggcccca ttgttataag
    65581 ctcattctaa ctcggtcgat gactgccaat ataacattgt aaagcccagg acgttaattt
    65641 atcctaggct ccctcttttt agttattaaa ctttattcat tgtaaattgt taattgattt
    65701 ttaaaaatta ttcgtcatcc attttcaata cagccaagaa agcatcctgt ggaatttcaa
    65761 cattaccaac tgctttcatc ttagctttac ctgctttttg tttttcaagt aatttacgtt
    65821 tacggcttat gtcaccgcca taacatttag ctaaaacgtt tttacccatt gatttaatat
    65881 ttgtacgtgc tacaattttt tgtcctattg cagcctgtac aggtacttca aattgctgtc
    65941 ttggaattaa cgttttaagt ttttcaacta atgctttacc acgttcatat gcaaaatctc
    66001 tatgaactat aaagcttaga gcatccactt tatcaccgtt taataaaata tccatcttca
    66061 ctaaattact ttctttattt tcgatgaact cataatcaaa tgatgcatat cctttggtat
    66121 tagatttaag ttgatcgaag aaatcaaata caacttcagc taaaggtaat tcataaacaa
    66181 tatttacacg aatatcatct aaatagtcca tatttataaa ttgtccacgt ttacgttgac
    66241 ataattccat tactgcccct acatagtcat ttggaaccat catagttgca cgaacatatg
    66301 gctcaaatat tttatcaatt ttatcacgat ctggcatttg tgctgggtta tcaaccgtca
    66361 cttctgaacc gtcccttaaa atacattgat aaattacaga tggtgcggtt gcaattaatt
    66421 caatgccaaa ttctctttca attctttctt gaattatttc catgtgtaac atacctaaga
    66481 aaccagttct ataaccaaaa cctaatgctt gtgatgattc aggctcaaat tctaatgatg
    66541 catcattcaa ttgtaatttt tctaatgctt ctcttaaatc attataattt ttgttatcta
    66601 tcgggaacag tccgcaatat accattggat tcattttctt ataaccttgc aatggttctg
    66661 atgcaggtct actagctaat gtgattgtgt caccaaccct agaatcatca acatttttaa
    66721 tacttgcaat aatataacca acatcaccaa ctgttaattc atcaactgga agctgcttag
    66781 gtgtattaat tccaacttct gttacttcga actctttacc agtggccatc attcgaattt
    66841 tatctccggc tttaacaaca ccgtctacaa ttcttatcga tgaaattacc cctctatatg
    66901 gatcatactc agaatcaaat attaacgctt ttagtggtgc ttctgggtca ccatctggag
    66961 ctggcacaac ttcaactatt ttctcaagta tctcttcaat tccaatatta gatttagcac
    67021 ttgctaaaac aacatcgtct tggtctaaac ctatcatatc ttcaatttct tgtttcacgc
    67081 gttcaggttc tgcagcaggt aaatcaattt tgttaattac aggcaataac tctaactcat
    67141 tatctaatgc caaataaaca tttgctaatg tttgtgcttc gataccttga gccgcatcta
    67201 ctactaaaat cgcgccctca caagctgcca aagaacgtga cacttcatat gtaaaatcga
    67261 catgtccagg cgtatcgatt aaatggaatg tataagtatt tccatcttta gcttcgtact
    67321 ttaaacgtac tgcgtttaat ttgattgtaa taccacgttc tctttctaaa tccattgaat
    67381 ctagtaactg atcttgcata tctcttgttt caactgattt ggtattttct aaaattctat
    67441 cagccaatgt agattttccg tggtcaatat gtgctataat cgagaaattc cttatattct
    67501 ctcttctttt taagcgttgc tcattatcca ttttatcctt ctcactttca taaaataaac
    67561 ccgtattatc tttcgcatct ttgatataat aacgttttta ataggtaaat gcaaacgcca
    67621 taatcttgga tgaactttga aattataaca atctttattt aaatacatac ttgcgatatg
    67681 ttaatatgtt aattacgtac ttataattat aaaacgtatt gattgtgttt ccaacacaat
    67741 ttaataaatc tgcaaaattt taagctaacc ccatcaaata aatgattgca caacggttag
    67801 acttttgtta aaatatttct tgttgtaatc aaataaaatt ttgataagat gaactcactt
    67861 ttaggaggtg acagaaatgg caaatatcaa atctgcaatt aaacgtgtaa aaacaactga
    67921 aaaagctgaa gcacgcaaca tttcacaaaa gagtgcaatg cgtacagcag ttaaaaacgc
    67981 taaaacagct gtttcaaata acgctgataa taaaaatgaa ttagtaagct tagcagttaa
    68041 gttagtagac aaagctgctc aaagtaattt aatacattca aacaaagctg accgtattaa
    68101 atcacaatta atgactgcaa ataaataatc tttttaaata aaagttcaag cgcatgcttg
    68161 aacttttatt ttttataaag atagaatgaa taattccagt attaactgtt tatccatata
    68221 tgatgattta agtttataat cagtttccgc acaagcatct ataatattca ataattcatc
    68281 aagttgataa tgtcttactt gtcctaacgc taattttact ctgtatggat gtacgcctat
    68341 tgttttagca atttgctgtc cactatatcc tttttgactc agaatcttac attgataaaa
    68401 taatcggtaa ttacttgtaa ttagtgcaag taatttaatg ggttcttctt tcatagttat
    68461 taaatctttt actaaatgaa ttgcttgttc tttctttctt ttctgaatgt attcagtcag
    68521 taaaaataca ttttgttcta aacttctatt aataatttga ttaacatcct gcttattaat
    68581 tgttggtcta tcgcctaaaa ataaaatcaa cttttctatc tcttgtgaga caatattaaa
    68641 gttaatacct gtcaactcaa taaataaatc taatgcatct cttttgatat ctttgaaatt
    68701 ctcatttaat ttactttgaa tccatt
//
LOCUS       DALMNS010000002        63764 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.002, whole genome shotgun sequence.
ACCESSION   DALMNS010000002 DALMNS010000000
VERSION     DALMNS010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 63764)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 63764)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..63764
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.002"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            47..397
                     /gene="sarV"
                     /locus_tag="O6Y56_000076"
     CDS             47..397
                     /gene="sarV"
                     /locus_tag="O6Y56_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarV"
                     /protein_id="HDB5573381.1"
                     /translation="MSNKVQRFIEAERELSQLKHWLKTTHKISIEEFVVLFKVYEAEK
                     ISGKELRDTLHFEMLWDTSKIDVIIRKIYKKELISKLRSEMDERQVFYFYSTSQKKLL
                     DKITKEIEVLSVTN"
     gene            complement(499..1710)
                     /locus_tag="O6Y56_000077"
     CDS             complement(499..1710)
                     /locus_tag="O6Y56_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5573382.1"
                     /translation="MTNQGSLNKSPIFTKSFTINFFVNFIVYLCMYLLLVVIAGYSKQ
                     AFDASDSLAGLVVGLFIVGSLIGRFATGKFVNQIGPKRLLFIGLIALIITQLLYFIDG
                     SLAFLIFVRLINGIATAVVTTATGTIAAYVTPVNRKSEGISLFSLSLVLGTAIGPFLG
                     MLLITKYAINLLFIICVILGILGLIISLFIKVDFEVTNNKTETNVIDKPRFSIHQFIA
                     KEAIPVAVIMLLIGVTYASILTYLQAFALERHLVTAASYFFICYAIASLITRPIAGRL
                     MDDKNENIIVYPAFIMLFLSFVCLISSYQSWLILLAGACLGLGYGNLSSAMQSIAIKV
                     SPPIKYGIATSTFYVGLDAGVGFGPSFLGLFTHMFSYSEIFGFMAALAIITMLVYFLI
                     HGRHVTRNAMN"
     gene            complement(1703..2143)
                     /locus_tag="O6Y56_000078"
     CDS             complement(1703..2143)
                     /locus_tag="O6Y56_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding protein"
                     /protein_id="HDB5573383.1"
                     /translation="MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKY
                     QPTTLIEISHRRAIEKPTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEI
                     VCLDVQKLQQAVVAKTNISQDQMQETINVMNQIHEILLKEAHND"
     gene            2306..3070
                     /locus_tag="O6Y56_000079"
     CDS             2306..3070
                     /locus_tag="O6Y56_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDB5573384.1"
                     /translation="MILKFDHIIHYIDQLDRFSFPGDVIKLHSGGYHHKYGTFNKLGY
                     INENYIELLDVENNEKLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLRTNDIETVKN
                     KLQSEQVEVVGPIQMERDTHKDGKAKWQLLYIMNQDDDEIKPPFFIQWEESDSMRTKK
                     LQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEENDHYTDLILKNDDIYFRIE
                     DGKVSKYHSVIIKDAQATSPYSIFIRGAIYRFEPLV"
     gene            complement(3062..3313)
                     /locus_tag="O6Y56_000080"
     CDS             complement(3062..3313)
                     /locus_tag="O6Y56_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573385.1"
                     /translation="MRTIILSLFIIMNIVAIIMTLSQPLTVNYFSLRVILIFFTFILS
                     IFFILIKSSRLNNTLTILSIVLAIIHMGILAHSTYVYLY"
     gene            3702..4967
                     /gene="femX"
                     /locus_tag="O6Y56_000081"
                     /gene_synonym="fmhB"
     CDS             3702..4967
                     /gene="femX"
                     /locus_tag="O6Y56_000081"
                     /gene_synonym="fmhB"
                     /EC_number="2.3.2.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II:glycine glycyltransferase"
                     /protein_id="HDB5573386.1"
                     /translation="MEKMHITNQEHDAFVKSHPNGDLLQLTKWAETKKLTGWYARRIA
                     VGRDGEIQGVAQLLFKKVPKLPYTLCYISRGFVVDYSNKEALNALLDSAKEIAKAEKA
                     YAIKIDPDVEVDKGTDALQNLKALGFKHKGFKEGLSKDYIQPRMTMITPIDKNDDELL
                     NSFERRNRSKVRLALKRGTTVERSDREGLKTFAELMKITGERDGFLTRDISYFENIYD
                     ALHEDGDAELFLVKLDPKENIAKVNQELNELHAEIAKWQQKMETSEKQAKKAQNMIND
                     AQNKIAKNEDLKRDLEALEKEHPEGIYLSGALLMFAGSKSYYLYGASSNEFRDFLPNH
                     HMQYTMMKYAREHGATTYDFGGTDNDPDKDSEHYGLWAFKKVWGTYLSEKIGEFDYVL
                     NQPLYQLIEQVKPRLTKAKIKISRKLKRK"
     gene            5084..8251
                     /locus_tag="O6Y56_000082"
     CDS             5084..8251
                     /locus_tag="O6Y56_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDB5573387.1"
                     /translation="MIKKLLQFSLGNKFAIFLMVVLVVLGGVYASAKLKLELLPNVQN
                     PVISVTTTMPGATPQSTQDEISSKIDNQVRSLAYVKNVKTQSVQNASIVTVEYENNTD
                     MDKAEEQLKKEIDKIKFKDEVGQPELRRNSMDAFPVLAYSFSNKENDLKKVTKVLNEQ
                     LIPKLQTVDGVQNAQLNGQTNREITLKFKQNELEKYGLTADDVENYLKTATRTTPLGL
                     FQFGDKDKSIVVDGQYQSVDAFKNINIPLTLAGGQGQSQSQSDNKQNSAMSDVNQASP
                     QQNSKASASNNISGMPTAKLGDLADITVGDVRTSISKTNGKDAVNLQITKAQDANTVQ
                     VAKDVQRKIDTFVDENKDFNVTKTMDTAKPVEKSLYTMVEKASLGTIVAIIVILLFLR
                     NIRTTAISIISIPLSLLMALIALKLSDVSLNILTLGALTVAIGRVIDDSIVVVENIYR
                     RLTDSEEQLKGGNLIISATTEVFKPIMSSTLVTIIVFLPLVFVSGSVGEMFRPFALAI
                     AFSLLASLLVSITLVPALAATLFKKGVKRRNKQYQEGLGVVSTTYKKVLHWSLNHKWI
                     VIILSTLILVATIVFGGPRLGTSFISAGDDKFLAITYTPKPGETEQAVLNHAKDVEKY
                     LKQKKHVKTIQYSVGGSSPVDPTGSTNSMAIMVEYDNDTPNFDVEADKVIKHADGFKH
                     PGEWKNQDLGTGAGNKSVEVTVKGPSMDAIKSTVKDIEQKMKQVKGLANVKSDLSQTY
                     DQYEIKVDQNKAAENGISASQLAMHLNENLPEKTVTTVKENGKTVDVKVKQNKQTDWS
                     EDKLNNITLKKPTGGTIKLGDIATLVKTTTPSKLTQEQGDYATMVSAKVTNKDVGGTT
                     RQVMSKINNLDKPNNVKVNIGGASDDINNAMTQLAFAMLAAIIIVYLILVITFKGGLA
                     PFTILFSLPFTVIGVIIALLITGETISVPSLIGMLMLIGIVVTNAIVLIDRVINNEQQ
                     GMEMKEALIEAGGTRIRPILMTAIATIGALVPLLFGQDSSILISKGLAATVIGGLISS
                     TLLTLVVVPVIYEILFTLKKRFTKR"
     gene            complement(8438..8755)
                     /gene="mspA"
                     /locus_tag="O6Y56_000083"
     CDS             complement(8438..8755)
                     /gene="mspA"
                     /locus_tag="O6Y56_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane stabilizing protein MspA"
                     /protein_id="HDB5573388.1"
                     /translation="MQFYLILLAILYLIVSFISIFKMEVVFTRILRIIMGVLLLFVLA
                     LTTMSFPKENWWVFIVLLLLVGNVEVTGFKMLKKDLKGVNILNLMSLFIFVIYFILTI
                     VLF"
     gene            complement(9000..9164)
                     /locus_tag="O6Y56_000084"
     CDS             complement(9000..9164)
                     /locus_tag="O6Y56_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573389.1"
                     /translation="MSLENQLAELKYDYVRLQGDLEKRESLNLDTSALVRQLKDIENE
                     IRNVRAQMQD"
     gene            9297..10205
                     /locus_tag="O6Y56_000085"
     CDS             9297..10205
                     /locus_tag="O6Y56_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002487080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDB5573390.1"
                     /translation="MTEQFTMIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSL
                     VIVNLNSAELKLSFSILPILMIIYGIVAKMIAVWFFRKYDNHMRGSVGMMTGAMNIGL
                     FAYPLIEVIWPKTGLIYFGMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQ
                     SVPLVTYIVMFILNISHIHLPHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIRA
                     TIKYLCLHYGLALIAGLLVHVLLPVSDDMIKTTLLVTWMFPVGVAIISYGIQFKYRTL
                     PFIGMTTNLTIIISIIILYVYQAVFV"
     gene            10476..10649
                     /locus_tag="O6Y56_000086"
     CDS             10476..10649
                     /locus_tag="O6Y56_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573391.1"
                     /translation="MSHSLCSYPLDVYGTYLINEYHQDFKSIANFKFLKRMINVMMCY
                     CVLFLEPCISWDI"
     gene            complement(10757..11620)
                     /locus_tag="O6Y56_000087"
     CDS             complement(10757..11620)
                     /locus_tag="O6Y56_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose uptake protein GlcU"
                     /protein_id="HDB5573392.1"
                     /translation="MQFLDFLIALLPALFWGSVVLINVFVGGGPYNQIRGTTLGALIV
                     GLGLLITGFAKFNNPTVIIVGLISGALWAFGQANQLKSISLIGVSNTMPVSTGMQLVG
                     TTLFSVIFLGEWSSMTQIIFGLIAMILLVTGVALTSLKAKNERQSDNPEFKKAMGILI
                     VSTVGYVGFVVLGDIFGVGGTDALFFQSVGMAIGGFILSMNHKTSLKSTALNLLPGVI
                     WGIGNLFMFYSQPKVGVATSFSLSQLLVIVSTLGGIFILGERKDRRQMTGIWAGIIII
                     VIAAIILGNLK"
     gene            complement(11801..12688)
                     /locus_tag="O6Y56_000088"
     CDS             complement(11801..12688)
                     /locus_tag="O6Y56_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5573393.1"
                     /translation="MSIVQLYDITQIKSFIEHSNYESASYLYKLPQQYNEIDVLITDA
                     IESPGVFSIKENDSIKAIILSFAYDKNKFKVIGPFVADNYVLSVETFETLFKTMTSNQ
                     PDDAVFNFSFEEGIQQYKPLMKVIQASYNFTDYYIEARTRLEEDMHQPNIIPYHKGFY
                     RAFSKLHTTTFKYQAHSPQDIIDSLDDHHHLFLFVSEGLLKGYLYLEIDSQQSIAEIK
                     YFSSHVDYRLKGIAFELLAYALQYAFDNFDIRKVYFKIRNKNNKLIERFNGLGFHINY
                     EYIKFKFESRNVKDQTIPE"
     gene            12754..12849
                     /locus_tag="O6Y56_000089"
     CDS             12754..12849
                     /locus_tag="O6Y56_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573394.1"
                     /translation="MILTCYNTFNTSFAIIEFKSKISGIDEARSI"
     gene            12875..15010
                     /locus_tag="O6Y56_000090"
     CDS             12875..15010
                     /locus_tag="O6Y56_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HDB5573395.1"
                     /translation="MKSLILAEKPSVARDIADALQINQKRNGYFENNQYIVTWALGHL
                     VTNATPEQYDKNLKEWRLEDLPIIPKYMKTVVIGKTSKQFKTVKALILDNKVKDIIIA
                     TDAGREGELVARLILDKVGNKKPLRRLWISSVTKKAIQQGFKNLKDGRQYNDLYYAAL
                     ARSEADWIVGINATRALTTKYDAQLSLGRVQTPTIQLVNTRQQEINQFKPQQYYTLSL
                     TVKGFDFQLESNQRYTNKETLEQIVNNLKNVDGKIKSVATKHKKSYPQSLYNLTDLQQ
                     DMYRRYKIGPKETLNTLQSLYERHKVVTYPRADSNYLTTDMVDTMKERIQATMATTYK
                     DQARPLISKTFSSKMSIFNNQKVSDHHAIIPTEVRPVMSDLSNRELKLYDMIVERFLE
                     ALMPPHEYDAITVTLEVAGHTFVLKENVATVLGFKSIRQGESITEMQQPFSEGDEVKI
                     LKTNIREHETTPPEYFNEGSLLKAMENPQNFIQLKDKKYAQTLKQTGGIGTVATRADI
                     IDKLFNMNAIESRDGKIKVTSKGKQILELAPEELTSPLLTAQWEEKLLLIERGKYQAK
                     TFINEMKDFTKDVVNGIKNSDRKYKHDNLTTTECPTCGKFMIKVKTKNGQMLVCQDPS
                     CKTKKNVQRKTNARCPNCKKKLTLFGKGKEAVYRCVCGHSETQAHMDQRMKSKSSGKV
                     SRKEMKKYMNKNEGLDNNPFKDALKNLNL"
     gene            15123..16457
                     /locus_tag="O6Y56_000091"
     CDS             15123..16457
                     /locus_tag="O6Y56_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000800694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDB5573396.1"
                     /translation="MKNYFQFDKYGTNFKREILGGITTFLSMAYILAVNPQVLSLAGV
                     KGVSEDMKMDQGAIFVATALAAFVGSLFMGLIAKYPIALAPGMGLNAFFAFTVVLTMG
                     IPWQVGLTGVLFSGIFFAILTVTGFREVIINAIPYQMKMAVSAGIGLFITFVGLQSSG
                     IIVKNESTLVTLGHLTDPPVLLAIFGIVITVILYAIKLPGSIFIGMIITAIVGMFTGL
                     IQMPTGIVGKIPSIEPTFGAAFEAFKDPSQLLTIQFLIVILTFLFIDFFDTAGTLVAV
                     ATQAGIMKDNKLPRAGRALFSDSLATIVGSVFGTTTTTSYIESTSGVAVGARTGFASI
                     VTGCCFLLALFFSPLIAVVTSAVTTPALVVVGVLMAANFAEINWKSFEVAVPAFITII
                     MMPLSYSIATGIACGFIFYPITMLISKKHKEVHPIMYVLMVLFILYFIFVHG"
     gene            complement(16651..17040)
                     /locus_tag="O6Y56_000092"
     CDS             complement(16651..17040)
                     /locus_tag="O6Y56_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573397.1"
                     /translation="MKNGPKLSLALIGIFLILCEFFYGIPFLGATFILSFGWQPLLFN
                     ALLYLILTIILLVNRQNAIRPIAIIPIFGIVGSFLAIIPFLGILIHWILFFLMILFVL
                     VVLSAPTYIPNKNARVIYTQYKDGHRE"
     gene            17397..17705
                     /gene="rpsJ"
                     /locus_tag="O6Y56_000093"
     CDS             17397..17705
                     /gene="rpsJ"
                     /locus_tag="O6Y56_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001118669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDB5573398.1"
                     /translation="MAKQKIRIRLKAYDHRVIDQSAEKIVETAKRSGADVSGPIPLPT
                     EKSVYTIIRAVHKYKDSREQFEQRTHKRLIDIVNPTPKTVDALMGLNLPSGVDIEIKL
                     "
     gene            17733..18395
                     /gene="rplC"
                     /locus_tag="O6Y56_000094"
     CDS             17733..18395
                     /gene="rplC"
                     /locus_tag="O6Y56_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000160215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDB5573399.1"
                     /translation="MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVD
                     GYNAIQVGFEDKKAYKKDAKSNKYANKPAEGHAKKADAAPKRFIREFRNVDVDAYEVG
                     QEVSVDTFVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGMASDA
                     SRVFKGQKMPGRMGGNTVTVQNLEVVQVDTENKVILVKGNVPGPKKGLVEIRTSIKKG
                     NK"
     gene            18422..19045
                     /gene="rplD"
                     /locus_tag="O6Y56_000095"
     CDS             18422..19045
                     /gene="rplD"
                     /locus_tag="O6Y56_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDB5573400.1"
                     /translation="MANYDVLKLDGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASL
                     RQGTHAVKNRSAVSGGGRKPWKQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMP
                     KKMRRLALRSALSFKAQENGLTVVDAFNFEAPKTKEFKNVLSTLEQPKKVLVVTENED
                     VNVELSARNIPGVQVTTAQGLNVLDITNADSLVITEAAAKKVEEVLG"
     gene            19045..19320
                     /gene="rplW"
                     /locus_tag="O6Y56_000096"
     CDS             19045..19320
                     /gene="rplW"
                     /locus_tag="O6Y56_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002506966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDB5573401.1"
                     /translation="MEARDILKRPVITEKSSEAMAEDKYTFDVDTRVNKTQVKMAVEE
                     IFNVKVASVNIMNYKPKKKRMGRYQGYTNKRRKAIVTLKEGSIDLFN"
     gene            19353..20186
                     /gene="rplB"
                     /locus_tag="O6Y56_000097"
     CDS             19353..20186
                     /gene="rplB"
                     /locus_tag="O6Y56_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDB5573402.1"
                     /translation="MAIKKYKPITNGRRNMTSLDFAEITKTTPEKSLLKPLPKKAGRN
                     NQGKLTVRHHGGGHKRQYRVIDFKRNKDGINAKVDSIQYDPNRSANIALVVYADGEKR
                     YIIAPKGLEVGQIVESGAEADIKVGNALPLQNIPVGTVVHNIELKPGKGGQIARSAGA
                     SAQVLGKEGKYVLIRLRSGEVRMILSTCRATIGQVGNLQHELVNVGKAGRSRWKGIRP
                     TVRGSVMNPNDHPHGGGEGRAPIGRPSPMSPWGKPTLGKKTRRGKKSSDKLIVRGRKK
                     K"
     gene            20253..20531
                     /gene="rpsS"
                     /locus_tag="O6Y56_000098"
     CDS             20253..20531
                     /gene="rpsS"
                     /locus_tag="O6Y56_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000533765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDB5573403.1"
                     /translation="MARSIKKGPFVDEHLMKKVEAQEGSEKKQVIKTWSRRSTIFPNF
                     IGHTFAVYDGRKHVPVYVTEDMVGHKLGEFAPTRTFKGHVADDKKTRR"
     gene            20560..20913
                     /gene="rplV"
                     /locus_tag="O6Y56_000099"
     CDS             20560..20913
                     /gene="rplV"
                     /locus_tag="O6Y56_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000387528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDB5573404.1"
                     /translation="MEAKAVARTIRIAPRKVRLVLDLIRGKNAAEAIAILKLTNKASS
                     PVIEKVLMSALANAEHNYDMNTDELVVKEAYANEGPTLKRFRPRAQGRASAINKRTSH
                     ITIVVSDGKEEAKEA"
     gene            20937..21590
                     /gene="rpsC"
                     /locus_tag="O6Y56_000100"
     CDS             20937..21590
                     /gene="rpsC"
                     /locus_tag="O6Y56_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDB5573405.1"
                     /translation="MGQKINPIGLRVGIIRDWEAKWYAEKDFASLLHEDLKIRKFIDN
                     ELKEASVSHVEIERAANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINV
                     IEIKKVDLDARLVAENIARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGAD
                     IARAEQYSEGTVPLHTLRADIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTSGGGK"
     gene            21593..22027
                     /gene="rplP"
                     /locus_tag="O6Y56_000101"
     CDS             21593..22027
                     /gene="rplP"
                     /locus_tag="O6Y56_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDB5573406.1"
                     /translation="MLLPKRVKYRRQHRPKTTGRSKGGNYVTFGEFGLQATTTSWITS
                     RQIESARIAMTRYMKRGGKVWIKIFPHTPYTKKPLEVRMGAGKGAVEGWIAVVKPGRI
                     LFEVAGVSEEVAREALRLASHKLPVKTKFVKREELGGETNES"
     gene            22017..22226
                     /gene="rpmC"
                     /locus_tag="O6Y56_000102"
     CDS             22017..22226
                     /gene="rpmC"
                     /locus_tag="O6Y56_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002509269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDB5573407.1"
                     /translation="MKAKEIRDLTTSEIEEQIKSSKEELFNLRFQLATGQLEETARIR
                     TVRKTIARLKTVAREREIEQSKANQ"
     gene            22250..22513
                     /gene="rpsQ"
                     /locus_tag="O6Y56_000103"
     CDS             22250..22513
                     /gene="rpsQ"
                     /locus_tag="O6Y56_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011983253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDB5573408.1"
                     /translation="MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSK
                     KYKTHDENNSAKLGDIVKIQETRPLSATKRFRLVEIVEESVII"
     gene            22545..22913
                     /gene="rplN"
                     /locus_tag="O6Y56_000104"
     CDS             22545..22913
                     /gene="rplN"
                     /locus_tag="O6Y56_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012727667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDB5573409.1"
                     /translation="MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVCTVK
                     NATPGGVVKKGDVVKAVIVRTKSGVRRNDGSYIKFDENACVIIRDDKGPRGTRIFGPV
                     ARELREGNFMKIVSLAPEVL"
     gene            22949..23266
                     /gene="rplX"
                     /locus_tag="O6Y56_000105"
     CDS             22949..23266
                     /gene="rplX"
                     /locus_tag="O6Y56_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDB5573410.1"
                     /translation="MHIKKGDNVKVIAGKDKGKEGKVIATLPKKDRVVVEGVNIMKKH
                     QKPTQLNPEGGILETEAAIHVSNVQLLDPKTNEPTRVGYKFVDGKKVRIAKKSGEEIK
                     SNN"
     gene            23293..23832
                     /gene="rplE"
                     /locus_tag="O6Y56_000106"
     CDS             23293..23832
                     /gene="rplE"
                     /locus_tag="O6Y56_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDB5573411.1"
                     /translation="MNRLKEKFNTEVTENLMKKFNYSSVMEVPKIDKIVVNMGVGDAV
                     QNSKVLDNAVEELELITGQKPLVTKAKKSIATFRLREGMPIGAKVTLRGERMYEFLDK
                     LISVSLPRVRDFQGVSKKAFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTA
                     NTDEEARELLANFGMPFRK"
     gene            23855..24040
                     /locus_tag="O6Y56_000107"
     CDS             23855..24040
                     /locus_tag="O6Y56_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011245027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HDB5573412.1"
                     /translation="MAKTSMVAKQQKKQKYAVREYTRCERCGRPHSVYRKFKLCRICF
                     RELAYKGQIPGVRKASW"
     gene            24072..24470
                     /gene="rpsH"
                     /locus_tag="O6Y56_000108"
     CDS             24072..24470
                     /gene="rpsH"
                     /locus_tag="O6Y56_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000178880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDB5573413.1"
                     /translation="MTMTDPIADMLTRVRNANMVRHEKLELPASNIKKEIAEILKSEG
                     FIKNVEYVEDDKQGVLRLFLKYGQNDERVITGLKRISKPGLRVYAKASEMPKVLNGLG
                     IALVSTSEGVITDKEARKRNVGGEIIAYVW"
     gene            24495..25031
                     /gene="rplF"
                     /locus_tag="O6Y56_000109"
     CDS             24495..25031
                     /gene="rplF"
                     /locus_tag="O6Y56_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDB5573414.1"
                     /translation="MSRVGKKIIDIPSDVTVTFDGNHVTVKGPKGELSRTLNERMTFK
                     QEENTIEVVRPSDSKEDRTNHGTTRALLNNMVQGVSQGYVKVLELVGVGYRAQMQGKD
                     LILNVGYSHPVEIKAEENITFSVEKNTVVKVEGISKEQVGALASNIRSVRPPEPYKGK
                     GIRYQGEYVRRKEGKTGK"
     gene            25062..25421
                     /gene="rplR"
                     /locus_tag="O6Y56_000110"
     CDS             25062..25421
                     /gene="rplR"
                     /locus_tag="O6Y56_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDB5573415.1"
                     /translation="MISKIDKNKVRLKRHARVRTNLSGTAEKPRLNVYRSNKHIYAQI
                     IDDNKGVTLAQASSKDSDIATTATKVELATKVGEAIAKKAADKGIKEIVFDRGGYLYH
                     GRVKALAEAARESGLEF"
     gene            25442..25942
                     /gene="rpsE"
                     /locus_tag="O6Y56_000111"
     CDS             25442..25942
                     /gene="rpsE"
                     /locus_tag="O6Y56_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDB5573416.1"
                     /translation="MARREEETKEFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNG
                     RVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPRVEGTTPHTITGRYGSGSVFMKPAAPG
                     TGVIAGGPVRAVLELAGITDILSKSLGSNTPINMVRATIDGLQNLKNAEDVAKLRGKT
                     VEELYN"
     gene            25959..26138
                     /gene="rpmD"
                     /locus_tag="O6Y56_000112"
     CDS             25959..26138
                     /gene="rpmD"
                     /locus_tag="O6Y56_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HDB5573417.1"
                     /translation="MAKLQITLTRSVIGRPETQRKTVEALGLKKTNSSVVVEDNPAIR
                     GQINKVKHLVTVEEK"
     gene            26155..26595
                     /gene="rplO"
                     /locus_tag="O6Y56_000113"
     CDS             26155..26595
                     /gene="rplO"
                     /locus_tag="O6Y56_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDB5573418.1"
                     /translation="MKLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGG
                     GVRPGFEGGQLPLFRRLPKRGFTNINRKEYAIVNLDQLNKFEDGTEVTPALLVESGVV
                     KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKGGAHEVI"
     gene            26595..27887
                     /gene="secY"
                     /locus_tag="O6Y56_000114"
     CDS             26595..27887
                     /gene="secY"
                     /locus_tag="O6Y56_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDB5573419.1"
                     /translation="MIQTLVNFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAAF
                     DNPQGSQGATELLNTFGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQ
                     GEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIMSYLLIALVLTAG
                     TAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVL
                     GLLVSLILLTVGAIYVLEAVRKIPIQYAKKQTAQRLGSQATYLPLKVNSAGVIPVIFA
                     MAFFLLPRTLTLFYPDKEWAQNIANAANPSSNVGMVVYIVLIILFTYFYAFVQVNPEK
                     MADNLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFMGLPQ
                     SIQIGGTSLLIVIGVAIETMKSLEAQVSQKEYKGFGGR"
     gene            27904..28551
                     /locus_tag="O6Y56_000115"
     CDS             27904..28551
                     /locus_tag="O6Y56_000115"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDB5573420.1"
                     /translation="MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETE
                     LGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSE
                     LDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQR
                     EDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL"
     gene            28744..28962
                     /gene="infA"
                     /locus_tag="O6Y56_000116"
     CDS             28744..28962
                     /gene="infA"
                     /locus_tag="O6Y56_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017185218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDB5573421.1"
                     /translation="MAKQDVIELEGTVLDTLPNAMFKVELENGHEILAHVSGKIRMNY
                     IRILPGDKVTVEMSPYDLTRGRITYRYK"
     gene            28994..29107
                     /gene="rpmJ"
                     /locus_tag="O6Y56_000117"
     CDS             28994..29107
                     /gene="rpmJ"
                     /locus_tag="O6Y56_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDB5573422.1"
                     /translation="MKVRPSVKPICEKCKVIKRKGKVMVICENPKHKQRQG"
     gene            29130..29495
                     /gene="rpsM"
                     /locus_tag="O6Y56_000118"
     CDS             29130..29495
                     /gene="rpsM"
                     /locus_tag="O6Y56_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDB5573423.1"
                     /translation="MARIAGVDIPREKRVVISLTYIYGIGTSTAQKILEEANVSADTR
                     VKDLTDDELGRIREVVDGYKVEGDLRRETNLNIKRLMEISSYRGIRHRRGLPVRGQKT
                     KNNARTRKGPVKTVANKKK"
     gene            29519..29908
                     /gene="rpsK"
                     /locus_tag="O6Y56_000119"
     CDS             29519..29908
                     /gene="rpsK"
                     /locus_tag="O6Y56_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016998822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDB5573424.1"
                     /translation="MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSW
                     SSAGALGFKGSKKSTPFAAQMASETASKSAMEHGLKTVEVTVKGPGPGRESAIRALQS
                     AGLEVTAIRDVTPVPHNGCRPPKRRRV"
     gene            29983..30927
                     /locus_tag="O6Y56_000120"
     CDS             29983..30927
                     /locus_tag="O6Y56_000120"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011302606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDB5573425.1"
                     /translation="MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRIL
                     LSSLPGAAVKYIEIEGVLHEFSAVDNVVEDVSTIIMNIKQLALKIYSEEDKTLEIDVR
                     DEGEVTASDITHDSDVEILNPELKIATVSKGGHLKIRLVANKGRGYALAEQNNTSDLP
                     IGVIPVDSLYSPVERVNYTVENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMT
                     EHLNIFVGLTDEAQNAEIMIEKEEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQE
                     LADKSEADMMKVRNLGRKSLEEVKYKLEDLGLGLRKED"
     gene            30944..31312
                     /gene="rplQ"
                     /locus_tag="O6Y56_000121"
     CDS             30944..31312
                     /gene="rplQ"
                     /locus_tag="O6Y56_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002450507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDB5573426.1"
                     /translation="MGYRKLGRTSDQRKAMLRDLATSLIISERIETTEARAKEVRSVV
                     EKLITLGKKGDLASRRNAAKTLRNVEILNEDETTQTALQKLFGEIAERYTERQGGYTR
                     ILKQGPRRGDGAESVIIELV"
     gene            31845..32654
                     /locus_tag="O6Y56_000122"
     CDS             31845..32654
                     /locus_tag="O6Y56_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter ATPase"
                     /protein_id="HDB5573427.1"
                     /translation="MEDKNSVIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHN
                     GSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKDIGIVFQNPDNQFVGSIVK
                     YDVAFGLENHAVPHDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIASVLALN
                     PSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKG
                     TVYKEGTATEIFDHAEELTTIGLDLPFPIKINQMLGHQTSFLTYEGLVDQL"
     gene            32651..33511
                     /locus_tag="O6Y56_000123"
     CDS             32651..33511
                     /locus_tag="O6Y56_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter ATPase"
                     /protein_id="HDB5573428.1"
                     /translation="MTIRFDNVSYTYQKGTPYQHQAIHDVNTEFEQGKYYAIVGQTGS
                     GKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDT
                     VEREMIFGPKNFKMNLDEAKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSIL
                     AMNPDIIVVDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILISHDMNEVARYADEVIV
                     MKEGSIVSQTSPKELFKDKEKLADWHIGLPEIVQLQYDFEQKHQTKLKDIALTEEAFV
                     SLYKEWQHEK"
     gene            33501..34307
                     /locus_tag="O6Y56_000124"
     CDS             33501..34307
                     /locus_tag="O6Y56_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HDB5573429.1"
                     /translation="MKNKLIIGRYLPINSFVHHLDPRAKLMFVFLFIILIFFCHSPLT
                     YLWVFALILFFMRLAKIQLWFLIKGLTPIFFFLIFTLMMHIFLTKGGYVLVEWHGITI
                     ETNGILEGIYISLRLIGIVMIATIMTLSTSPIDLTDAFERLLAPLKMFKLPVHQLSMI
                     MSIALRFIPTLMDELDKIILAQKSRGSEISSGNIATRIKSFIPLLVPLFISAFQRAEE
                     LAVAMEVRGYDANVKRTSYRQLKWQLRDTLSLIMIIPIAIILFVLKYSGV"
     gene            34312..35115
                     /gene="truA"
                     /locus_tag="O6Y56_000125"
     CDS             34312..35115
                     /gene="truA"
                     /locus_tag="O6Y56_000125"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDB5573430.1"
                     /translation="MRILVEIAYQGNNFLGFQIQQNGRTVQQQFEKLLQRMHKRHVRI
                     HPSSRTDRGVHAIQQYFHFDTELNIPMSQWQYAMNRTLPDDIYVNNVVTVDDDFHCRY
                     DCVGKRYRYKVYQAQHRDPFQSGLKTFIPEPLDLDKMNRAAQQFIGTHDFTGFCSQKT
                     EVESKVRTLYQSEIVKTDDGFDYIVTGSGFLYNMVRVLVAFLIEVGKGRHEVSDVPKL
                     LESKNRKNVPFTAPAEGLYLEKIYLDENELLKDFGNDIKIHRKKSLQND"
     gene            35355..35792
                     /gene="rplM"
                     /locus_tag="O6Y56_000126"
     CDS             35355..35792
                     /gene="rplM"
                     /locus_tag="O6Y56_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019468667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDB5573431.1"
                     /translation="MRQTFMANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVT
                     YTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLI
                     ENSIKGMLPSTRLGEKQGKKLFVYGGAEHPHAAQQPENYELRG"
     gene            35806..36204
                     /gene="rpsI"
                     /locus_tag="O6Y56_000127"
     CDS             35806..36204
                     /gene="rpsI"
                     /locus_tag="O6Y56_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDB5573432.1"
                     /translation="MTLAQVEYRGTGRRKNSVARVRLVPGEGNITVNNRDVREYLPFE
                     SLILDLNQPFDVTETKGNYDVLVNVHGGGFTGQAQAIRHGIARALLEADPEYRGSLKR
                     AGLLTRDPRMKERKKPGLKAARRSPQFSKR"
     gene            36553..37989
                     /locus_tag="O6Y56_000128"
     CDS             36553..37989
                     /locus_tag="O6Y56_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000204270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HDB5573433.1"
                     /translation="MTSSKYIEYLQTEVEGQLLDRKRASINPKDVAQHISAFANAEGG
                     KLVIGIEDNGEISGFNHSKAKKKEVYIEAPFEHLYRIPKYTYEIIEVKKRDGTMDEIL
                     IFDIEPSYDAIITLKDDSVYLRINDKSRKLTHNQITNLEYDRGSRRFEEELVEYSSIE
                     DVNEELVDEFKQLLNTNVDNEKLLKARGFMREGKLTVAGLLLFSNNINVYLPGARIRF
                     MRYEGTKEESGTRLNIVKDITFDKALPVAIREARAFINTQLREYTFLGKEGRFVTLPE
                     YPEFAWFEGMINSIVHRRYDNQGDHIRIKMFDDRLEISSPGALPASVMLENIKEERYS
                     RNPKLAAALTQYKWVRESNEGVGRIFDEMKEYFLDDPVYSEPNNSSVQLALKNNIIAR
                     KKRETGRVSNIITPELFESLNEQQELIVRHLYNQGELTASKIANIIQRSVPTARKRLK
                     ELEEMNIISTHGSSKNDPKRTYYLLGFE"
     gene            38981..39163
                     /locus_tag="O6Y56_000129"
     CDS             38981..39163
                     /locus_tag="O6Y56_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573434.1"
                     /translation="MKDSIFWKKAFIPVYFIVAMLAFLLFKFYIKTDNFSIYLMIIFL
                     ICLGTASIIYNYKNNR"
     gene            complement(39145..39312)
                     /locus_tag="O6Y56_000130"
                     /pseudo
     CDS             complement(39145..39312)
                     /locus_tag="O6Y56_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000567545.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            39602..41266
                     /gene="alsS"
                     /locus_tag="O6Y56_000131"
     CDS             39602..41266
                     /gene="alsS"
                     /locus_tag="O6Y56_000131"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase AlsS"
                     /protein_id="HDB5573435.1"
                     /translation="MTDKKYTAADMVIDTLKNNGVEYVFGIPGAKIDYLFNALIDDGP
                     ELIVTRHEQNAAMMAQGIGRLTGKPGVVLVTSGPGVSNLTTGLLTATSEGDPVLALGG
                     QVKRNDLLRLTHQSIDNAALLKYSSKYSEEVQDPESLSEVMTNAIRIATSGKNGASFI
                     SIPQDVISSPVESKAISLCQKPNLGVPSEQDINDVIEVIKNASFPVLLAGMRSSSADE
                     TNAIRKLVERTNLPVVETFQGAGVISRELENHFFGRVGLFRNQVGDELLRKSDLVVTI
                     GYDPIEYEASNWNKELDTQIINIDEVQAEITNYMQPKKELIGNIAKTIEMISDKVDEP
                     FINQQHLDELEQLRAHIDQETGIKATHEEGILHPVEIIESMQKVLTDETTVTVDVGSH
                     YIWMARNFRSYNPRHLLFSNGMQTLGVALPWAISAALVRPNTQVVSVAGDGGFLFSSQ
                     DLETAVRKNLNIIQLIWNDGKYNMVEFQEEMKYKRSSGVDFGPVDFVKYAESFGAKGL
                     RVTNQEELEAAIKEGYETDGPVLIDIPVNYKDNIKLSTNMLPDVFN"
     gene            41303..42007
                     /gene="budA"
                     /locus_tag="O6Y56_000132"
     CDS             41303..42007
                     /gene="budA"
                     /locus_tag="O6Y56_000132"
                     /EC_number="4.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HDB5573436.1"
                     /translation="MASVLYQHGTLGTLMAGLLKGTASINELLQHGDLGIATLTGSNG
                     EVIFLDGKAYHANEHKEFVELKGDELTPYATVTKFVADTSYETKDKSSEAVFAEIKEK
                     MLSENLFSAVKISGLFKKMHVRMMPAQEPPYTRLIDSARRQPEQTETYVKGSVVGFFT
                     PELFHGIGSAGFHVHFANDDRNFGGHVLDFEVEDVKVEIQNIETFEQHFPIQDEDFIN
                     ANIDYKDIADEIREAE"
     gene            complement(42398..42823)
                     /locus_tag="O6Y56_000133"
     CDS             complement(42398..42823)
                     /locus_tag="O6Y56_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000769702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAP domain-containing protein"
                     /protein_id="HDB5573437.1"
                     /translation="MKLKSFVTATLALGLLSTVGAALPSHEASADSNNGYKEMTMDGY
                     HTVPYTISVDGITALHRTYFVFPENKKVLYQEIDSKVKNELASQRGVTTEKINNAQTA
                     TYTLTLNDGNKKVVNLKKNDDAKNSIDPSTIKQIQIVVK"
     gene            complement(43012..43647)
                     /locus_tag="O6Y56_000134"
     CDS             complement(43012..43647)
                     /locus_tag="O6Y56_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000800345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HDB5573438.1"
                     /translation="MKNVYFYIIDGLADWEISNILAELNSKRFFKKDAQTINIEMVSN
                     SKTPITTMGGINIKPECLIEEISISKDTFLILPGSDTWNDSKHLPVIKIAKEVLSNGG
                     YVAAICGATISLADIGILNAYYHTSNDLLYLESFSSNYHGQKLYIDQPSVSHKNLITA
                     SSTGALMWTKDILHHLDVFKHSTLDAWFNYFSTGNSKYYFELQQTLNKDDN"
     gene            43738..44667
                     /locus_tag="O6Y56_000135"
     CDS             43738..44667
                     /locus_tag="O6Y56_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000703976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HDB5573439.1"
                     /translation="MKISRLISIILILNERKRVSAHELSELMEVSQRTIYRDIEAINI
                     AGIPVYSIPGVGGGFEIMENFKIDKNTFTENELASLLISNSNFPEKLKNNDFFNTNLK
                     IKSLIPKEKLNSIETQVEQFQLDSNHWNELRNIDEQLIKFKNAIQNNQVLKIKYINHL
                     GNKTEREVEPYQLILKAGHWYCYVYCYLRDDFRLLKLNRVIHLQELESKFIKKMYIDP
                     LLSTNRIFEKLKMTITLRVHESIVERLLDFCDYDSFRQQNNRYYVVDFPFIDNSYYFG
                     LILSFGDKCEVLEPTEIRNKMKQTIKKMADNYK"
     gene            complement(44841..47264)
                     /locus_tag="O6Y56_000136"
     CDS             complement(44841..47264)
                     /locus_tag="O6Y56_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide lyase 8 family protein"
                     /protein_id="HDB5573440.1"
                     /translation="MTYRMKKWQKLSTITLLMAGVITLNGGEFRSIDKHQIAVADTNV
                     QTLDYEKLRNTWLDVNYGYNQYDEKNDAMKKKFDATENEAKKLLEDMKTENDRKYLWD
                     SAKDLDTKSADMTRTYRNIEKIAEAMKHKNTKLKTDENKKKVKDALEWLHKNAYGKEP
                     TEKVKELSENFKITDSSKKKALNWWDYEIGTPRALTNTLILLKEDFTDEEKKKYTAPI
                     KTFAPDSEKILSSVGKPEQAKGGNLVDIAKVKLLESIIEEDTTMMKESIDAFNKVFTY
                     VQSNATGKERNGFYKDGSYIDHQDVPYTGAYGVVLLEGISQMMPMIKATPFKDSNQND
                     TTLKSWIDEGFMPLIYKSEMMDLSRGRAISRENETSHSASATVMKSLLRLSDAMDDST
                     KAKYKKIVKTSVESDSSYKQTDYLNSYSDIDKMKSLMTDSTISTNGLTQQLKIYNDMD
                     RVTYHNKDLDFAFGLSMTSKNVARYESINNENLKGWHTGAGMSYLYNSDVKHYRDNFW
                     ATADMKRLAGTTTLDNEEPKENKNSDKTFVGGTKFDDQHASIGMDFENQDKTLTAKKS
                     YFILNDKIFFLGTGIKSTDSSKNPVTTIENRKANGYTLYTDDKQTTASDNQGTNSVFL
                     ESPNKPKNNIGYHFLNKPKITVKKESHTGKWSDINKSQKDTQKTDEYYEVTQKHSDKD
                     DKYGYVLYPGISKNVFNTKKDLVTIVKQDDDFHVVKDNESVWAGVNYSNSTQTFDINN
                     TKVEVKAKGMFILKKKDDNTYECSFYNPESTNTASDIVSKISMTGYSITNKNTSTTNE
                     SGVRFELTK"
     gene            complement(47261..47428)
                     /locus_tag="O6Y56_000137"
     CDS             complement(47261..47428)
                     /locus_tag="O6Y56_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573441.1"
                     /translation="MRKIWVIDCLYASTFFVDCLKVDSHLYTLTNFEKLNHYLIIIFI
                     AHAQHKKETCQ"
     gene            47671..48087
                     /locus_tag="O6Y56_000138"
     CDS             47671..48087
                     /locus_tag="O6Y56_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDB5573442.1"
                     /translation="MKTKEVVALMNISQDTLRYYEKVGVIPPVNRDENGYRIYNDSDL
                     NWIYLVKNLRNAGVSIESLIEFCRLAQLPKNENIQAQQKQILNKQLEELNENLKTIHD
                     ARDLLQYKIDNYDNHIAKINASDNHDANVERLWERK"
     gene            48157..49005
                     /locus_tag="O6Y56_000139"
     CDS             48157..49005
                     /locus_tag="O6Y56_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDB5573443.1"
                     /translation="MNHIEISKDVKIPVLGFGVFQIPQEQTAEAVKDAIKAGYRHIDT
                     AQSYLNETEVGQGIEASGIDRSELFITTKVWIENVNYEDTIKSIERSLQRLNLDYLDL
                     VLIHQPYNDVYGSWRALEELKETGKIKAIGVSNFGVDRIVDLGIHNRIQPQVNQIEIN
                     PFHQQEEQVAALQQENVVVEAWAPFAEGKNQLFQNQLLQAIADKYNKSIAQVILRWLV
                     ERDIVVLAKSVNPKRMAQNLDIFDFELTEEDKQQIATLEESNSQFFSHADPEMIKALT
                     SRELDV"
     gene            49238..49441
                     /locus_tag="O6Y56_000140"
     CDS             49238..49441
                     /locus_tag="O6Y56_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000875476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573444.1"
                     /translation="MKYKHFAIITLITGIVMLTAMYLVPFEYHKIPIFAGMAIIFTVY
                     FSNKKSIDETNIFSKKNRNKSKQ"
     gene            complement(49525..49689)
                     /locus_tag="O6Y56_000141"
                     /pseudo
     CDS             complement(49525..49689)
                     /locus_tag="O6Y56_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014937062.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(49726..50466)
                     /locus_tag="O6Y56_000142"
     CDS             complement(49726..50466)
                     /locus_tag="O6Y56_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HDB5573445.1"
                     /translation="MFNLENDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMGGL
                     FDEISKDGLSPEYLLSRDYLEDDPEGFINFCHKRLLFVDTIPNIVHDWIAKLERNQQS
                     LGVITQNIDGLHSDAGSQHVDELHGTFNRFYCNACHKSYTKSDVIDRTLKHCDNCGGA
                     IRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISNFKGDNLIIIN
                     KDRTPYDNDATLVIHDDMVSVVKSLMTE"
     gene            50672..51463
                     /locus_tag="O6Y56_000143"
     CDS             50672..51463
                     /locus_tag="O6Y56_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDB5573446.1"
                     /translation="MRNRLNKGGNFTLNKHERLDEIAKLVNKKGTIRTNEIVEGLNVS
                     DMTVRRDLIELENKGILTKIHGGARSNSTFQYKEMSHKEKHTRQIAEKRFIARKAASL
                     IEDGDTLFFGPGTTVELLAEEVNHHTLTIITNCLPVYKILLEKQTAHFRVYLIGGEMR
                     HITEAFVGEMANAMLEKLRFSKMFFSSNAVNKGAVMTSTLDEAYTQQLALSNSIEKYL
                     LIDHTKVGKEDFTSFCQLNELTAVVMDYEDEEKVETIKTYIEVVD"
     gene            51831..52259
                     /gene="lacA"
                     /locus_tag="O6Y56_000144"
     CDS             51831..52259
                     /gene="lacA"
                     /locus_tag="O6Y56_000144"
                     /EC_number="5.3.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-6-phosphate isomerase subunit LacA"
                     /protein_id="HDB5573447.1"
                     /translation="MAIIIGSDEAGKRLKEVIKSYLLDNKYDVVDVTEGQEVDFVDAT
                     LAVAKDVQSQEGNLGIVIDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMI
                     TMGSEIVGDTLAKNVVKGFVEGKYDGGRHQIRVDMLNKMC"
     gene            52275..52790
                     /gene="lacB"
                     /locus_tag="O6Y56_000145"
     CDS             52275..52790
                     /gene="lacB"
                     /locus_tag="O6Y56_000145"
                     /EC_number="5.3.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-6-phosphate isomerase subunit LacB"
                     /protein_id="HDB5573448.1"
                     /translation="MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPI
                     FGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPGVRSALVRDMTSALYAKEELNAN
                     VIGFGGRIIGELLMCDIIDAFINAEYKPTEENKKLIAKIKHLETSNADQADPHFFDEF
                     LEKWDRGEYHD"
     gene            52803..53735
                     /gene="lacC"
                     /locus_tag="O6Y56_000146"
     CDS             52803..53735
                     /gene="lacC"
                     /locus_tag="O6Y56_000146"
                     /EC_number="2.7.1.144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-6-phosphate kinase"
                     /protein_id="HDB5573449.1"
                     /translation="MILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTR
                     VLAQVGEPVLASGFIGGELGQFIAKKLDHAGIKHAFYNIKGETRNCIAILHEGQQTEI
                     LEQGPEIDNQEAAGFIKHFEQLLEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPV
                     ILDCSGATLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEW
                     IIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHENDHDLLKK
                     ANTLGMLNAQEAQTGYVNLNNYDDLFNQIEVLEV"
     gene            53739..54719
                     /gene="lacD"
                     /locus_tag="O6Y56_000147"
     CDS             53739..54719
                     /gene="lacD"
                     /locus_tag="O6Y56_000147"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase"
                     /protein_id="HDB5573450.1"
                     /translation="MSKSNQKIASIEQLSNNEGIISALAFDQRGALKRMMAKHQTEEP
                     TVAQIEQLKVLVAEELTQYASSILLDPEYGLPASDARNKDCGLLLAYEKTGYDVNAKG
                     RLPDCLVEWSAKRLKEQGANAVKFLLYYDVDDTEEINIQKKAYIERIGSECVAEDIPF
                     FLEVLTYDDNIPDNGSVEFAKVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGF
                     AEGEVVYTKEEAAQHFKDQDAATHLPYIYLSAGVSAELFQETLKFAHEAGAKFNGVLC
                     GRATWSGAVQVYIEQGEDAAREWLRTTGFKNIDDLNKVLKDTATSWKQRK"
     gene            54741..55052
                     /locus_tag="O6Y56_000148"
     CDS             54741..55052
                     /locus_tag="O6Y56_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HDB5573451.1"
                     /translation="MNREEVQLLGFEIVAFAGDARSKFLEALTAAQAGDFAKADALIE
                     EGNNCIAEAHRAQTSLLAKEAQGDDIAYSVTMMHGQDHLMTTILLKDLMKHLLEFYKR
                     G"
     gene            55058..56770
                     /locus_tag="O6Y56_000149"
     CDS             55058..56770
                     /locus_tag="O6Y56_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDB5573452.1"
                     /translation="MMQKLIAQIEKGKPFFEKLSRNIYLRAIRDGFISAMPVILFSSI
                     FLLIAYVPNIFGFKWDKGMEAILMKPYNYTMGLVAFLVAGTTAKSLTDSFNRKLESTN
                     QINFISTMLAAMCGFLFLASDPAKDGGFLSAFMGTKGLLTAFLSAFVTVIVYNFCVKR
                     NITIKMPKEVPPNISQVFKDLIPFSAVIIILYALDLVIRNSFKSNVAEGILKLFEPLF
                     TAADGWIGVTIIFGAFALFWFVGIHGPSIVEPAIAAITYANIEANFKLLQAGEHADKI
                     ITSGTQMFIVTFGGTGATLVVPFMFMWMTKSKRNKAIGRASVVPTFFGVNEPILFGAP
                     LVLNPVFFIPFVLAPIVNVWIFKLFVEVLGMNSFSVNLPWTTPGPLGIIMGTGFGLWS
                     FVLAITLIVVDIIIYYPFLKVYDSEILDEEEGRKESNSDLKEKVAANFDTKKADSILA
                     ASGVSDDAAKASNITEQTNVLVLCAGGGTSGLLANALNKAAEEYHVPVKAAAGGYGAH
                     MDIMKEYQLIILAPQVASNYEDIKQDTDRLGIKLAKTQGAEYIKLTRDGQAALDFVQQ
                     QFEN"
     gene            56788..58200
                     /gene="lacG"
                     /locus_tag="O6Y56_000150"
     CDS             56788..58200
                     /gene="lacG"
                     /locus_tag="O6Y56_000150"
                     /EC_number="3.2.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-galactosidase"
                     /protein_id="HDB5573453.1"
                     /translation="MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY
                     TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAE
                     CHKRHVEPFVTLHHFDTPEVLHKDGDFLNRKTIDYFVDYAEYCFKEFPEVKYWTTFNE
                     IGPIGDGQYLVGKFPPGIKYDFEKVFQSHHNMMVAHARAVKLFKDGGYQGEIGVVHAL
                     PTKYPFDPSNPEDVRAAELEDIIHNKFILDATYLGKYSRETMEGVQHILSVNGGKLNI
                     TDKDYAILDAAKDLNDFLGINYYMSDWMRGYDGESEITHNATGDKGGSKYQLKGVGQR
                     EFDVDVPRTDWDWMIYPQGLYDQIMRVVKDYPNYHKIYITENGLGYKDEFIESEKTVH
                     DDARIDYVRQHLNVIADAIKDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQE
                     RYPKKSAYWYKELAETKEIK"
     gene            58466..59335
                     /locus_tag="O6Y56_000151"
     CDS             58466..59335
                     /locus_tag="O6Y56_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000719336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDB5573454.1"
                     /translation="MKKIFVIITTLLAVAIIIGSIITVVFSQRQAQTFKIQQQQFVKK
                     PIPTLFLHGFGGSANSEKFMVKQAEKRGVTKDIITAYVSKDGAVTFKGKLSKDAVNPI
                     VKIELENNRQGYLDKNAAWFKNVLTKLQSEYNFDKFNFVGHSMGNLTFAQYMMTYGND
                     KSLPQLNKQVNIAGTFNGVLNMNEDVNEITVDKDGKPSRMNQPYQQLRVLKDIYKGKG
                     IEVLNIYGDLKDGTHSDGRVSNSSSKSLKYLLGNSPKSYRESKYEGESAQHSQLHENE
                     NVANELIDFLWKK"
     gene            59614..60615
                     /locus_tag="O6Y56_000152"
     CDS             59614..60615
                     /locus_tag="O6Y56_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HDB5573455.1"
                     /translation="MQNKQILFNKVPEGMPQEDTFKIEDIDTPKLESDGVLVQTLYIS
                     VDPYMRGRMTKADSYVQPFEIGKPIVSHVVAKVIDSTLADYKKGDVVVGMLPWRIINH
                     VQADRITKVPTTDVPLDLYLSVLGMPGQTAYHGLLDIGQPKDGDTVVVSAASGAVGSV
                     VGQIAKIKGCRVVGIAGGDKKVNYLTETLGFDAGIDYKKEDFAEALAQAVPDGIDVYF
                     ENVGGTVGDEVFKHLNRFARVPVCGAISSYNHPEADIGPRIQGTLIKKQVMMRGFLVS
                     EFANDFKEASEQLATWVQEGKIQSQVTIEDGFENAPRAFKNLFTGDNFGKQVIKVSE"
     gene            60850..61857
                     /locus_tag="O6Y56_000153"
     CDS             60850..61857
                     /locus_tag="O6Y56_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HDB5573456.1"
                     /translation="MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNP
                     VDTKQRQMEVTQAPRVLGFDAIGTVEAIGPDVTLFSPGDVVFYAGSPDRQGSNATYQL
                     VSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPSENIGKSVLIVNGAGG
                     VGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHKEDLVRQFKEKEIPLVDY
                     IFCTYNTDLYYNTMIELIKPLGHITTIVAFNEDQDLNALKLKSITFTHEFMFARPIHR
                     TPDMIKQHEYLEDITKNIESGHYQPTTTQVFEGLTPENLYQAHQLLEKQSMIGKLVIN
                     I"
     gene            62164..63726
                     /locus_tag="O6Y56_000154"
     CDS             62164..63726
                     /locus_tag="O6Y56_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDB5573457.1"
                     /translation="MKNKSVSLVFWVSLVICTIFVAFGAIFPKQLEKLTQNITTFIAL
                     HFSWYYLLLVLVILFVCVYILFSRYANITLGEEGEDPEFSLPSWFAMLFSAGMGIGLV
                     FWTTAEPISHAFKLTPIHKAGTQSAINDAMQFSFFHWGIHAWAVYGIVALVFAYFSFH
                     KGYPGLVSATLTPLLGEKAMRGPLGGAIDVLAVIATVTGVAATLGFGALQINEGLHFL
                     FNVPSNFTMQVILIVTATILFTWSAWSGIDKGIKTLSNINMLLAFVVLIGLFIVGPTL
                     YILNTFTNGLGNYIANFFSMSLRIPSGGQKFQWLQNWTIFYWAWWISWAPFVGIFIAR
                     VSKGRTIKEFILGVLFVPALVCFIFFAVFGASAIYLQDNHIADIAKAATETATFATLQ
                     HYPLGFVLSLITLLVIMIFFVTSADSATYVLGMLSSSGDINPKSFVKVSWGIIMALFA
                     IIMIYTGGTQAIQNLLIIAALPFSVVIIAMIWSLLKSLSEEKPRNSNKVLIKHRDPDI
                     LEYRSSKHIDEN"
BASE COUNT        22772 a         9554 c        11876 g        19562 t
ORIGIN      
        1 atatgaatta caaacatcta agaagaaaca taggaggcat catattatga gtaataaagt
       61 tcaacgtttt atagaagcag aaagggagtt aagtcagtta aagcactggt taaaaacaac
      121 acataagatt tcaattgaag aatttgtagt actttttaaa gtgtatgaag ctgaaaagat
      181 tagcggtaaa gaattgaggg acacattaca ttttgaaatg ctatgggata caagtaaaat
      241 cgatgtgatt atccgtaaaa tctataaaaa agagcttatt tctaaattgc gttctgaaat
      301 ggatgaaaga caagtattct atttctatag tacttctcaa aagaaattgt tagataaaat
      361 tactaaagaa atagaagtgt taagcgttac aaactaaaaa cttaaaaagc atgccaatca
      421 gtacatcata attgcgtctt ggggacagac aaatgatgaa tagagattgg catgcttttt
      481 atttttgaat ataaatattt agttcatggc atttctagtt acatgacgtc catgaattaa
      541 gaagtaaaca agcatagtaa tgattgctaa agcggccata aagccgaaga tttcactata
      601 tgaaaacata tgagtaaata acccaaggaa tgatggaccg aagcctacac ctgcatctag
      661 accaacgtaa aaagtagatg tcgcgatacc atatttaatc gggggtgaga cttttatcgc
      721 aatagattgc attgcagatg ataaatttcc ataccctaaa cctaggcaag caccagcaag
      781 taatattaac cagctttgat agcttgaaat taagcacaca aatgaaagga aaagcatgat
      841 aaatgctggg tagacaataa tattttcatt tttatcatcc atcaatctac cagcaatagg
      901 tctagtaatt aacgatgcta tagcatagca aataaagaaa tagcttgctg cagtgactag
      961 gtgtcgctct aaagcaaatg cttgtaaata agttaggatg gacgcatagg taacgccaat
     1021 taaaagcata attacagcaa caggaatggc ctcttttgca ataaattgat gaatactaaa
     1081 tcttggttta tcaatgacat tagtttcagt tttgttattt gttacttcga aatcaacttt
     1141 tataaataat gagataatga gtccgagtat gcctaatatg acacaaataa taaacagtaa
     1201 attaattgcg tattttgtaa taagtaacat acctagaaat gggccaatcg ctgtacctaa
     1261 tactaaactt aaggaaaata aactgatgcc ttcacttttt ctattaacag gggtaacgta
     1321 tgccgcaata gtacctgttg cagttgtcac aactgcagtt gcgataccgt ttatgagacg
     1381 tacaaagatt aaaaaagcta aagatccatc aataaaataa agtaattgcg tgataattaa
     1441 agcaattaaa ccaataaata ataatcgttt aggtccgatt tgatttacaa atttacctgt
     1501 agcaaatcga ccaattaaag acccgacaat aaatagtcct acaactaatc cggctaatga
     1561 atcggaagcg tcgaaagctt gcttactata gccagcaata actacaagta acaaatacat
     1621 gcataggtat acgataaagt tgacaaaaaa gttaatagta aaacttttgg tgaaaatagg
     1681 tgatttattt aatgagcctt gattagtcat tgtgtgcctc ctttaataat atttcatgaa
     1741 tttgattcat cacatttatg gtttcttgca tttgatcttg cgaaatgttt gttttggcaa
     1801 ctactgcttg ttggagcttt tgtacatcaa gacaaacaat ctcatataat tcatgccctt
     1861 taggtgttaa agttaaaaac ttttgtcgtt tatcctctaa actgttttct actgtaataa
     1921 ggtcattttc tattagagct tttaaagttt ttcttgcagt aggcttttca attgcacgtc
     1981 tatgtgaaat ttcaatgaga gtagtgggtt gatatttagc tatatcgcgt aagattaacc
     2041 attgaccata atatatattg tgtttttcca aaatcggctc tgctaatttt aaataggggc
     2101 gatatattgt tataaaacta ttgaaaaatt cttgtgatag catagtgaca tctcctaaga
     2161 taaaatagtt agcttagcta acctttttta caacaatagt aattataaaa cgggggcaat
     2221 tagaaatcaa tatataatta ttaagagcaa aaatatttat actttgttaa aataagcgta
     2281 attacatgta aataggggga tactaatgat attgaaattt gatcacatca ttcattatat
     2341 agatcagtta gatcggttta gttttccagg agatgttata aaattacatt caggtgggta
     2401 tcatcataaa tatggaacat tcaataaatt aggttatatc aatgaaaatt atattgagct
     2461 actagatgta gaaaataatg aaaagttgaa aaagatggca aaaacgatag aaggtggagt
     2521 cgctttcgct actcaaattg ttcaagagaa gtatgagcaa ggctttaaaa atatttgttt
     2581 gcgtacaaat gatattgaga cagttaaaaa taaactacaa agtgagcagg ttgaagtagt
     2641 aggtccgatt caaatggaaa gggatacaca taaagatggt aaggcaaagt ggcaattgct
     2701 ttatataatg aatcaggatg atgatgaaat taagccacca ttttttattc aatgggaaga
     2761 aagtgattcc atgcgtacta aaaaattgca aaaatatttt caaaaacaat tttcaattga
     2821 aactgttatt gtgaaaagta aaaaccgatc gcaaacagta tcgaattggt tgaaatggtt
     2881 tgatatggac attgtagaag agaacgacca ttacacagat ttgattttaa aaaatgatga
     2941 tatttatttt agaattgaag atggtaaagt ttcaaaatat cattcggtta tcataaaaga
     3001 cgcacaagca acttcaccat attcaatttt tatcagaggt gctatttatc gctttgaacc
     3061 attagtataa atatacgtaa gtgctatgag cgagaatgcc catatgaata atggcaagca
     3121 caatggaaag aatcgttaat gtattattta atcgtgatga cttaattaaa atgaaaaaga
     3181 ttgataatat aaatgtgaaa aagataagta taacccgtaa actaaagtaa ttcacggtga
     3241 gaggttgact caatgtcata atgattgcaa cgatgttcat aattataaat agacttaaaa
     3301 taattgttct catatcaaac acctcattgt tagattattg acattataac aggggtaatt
     3361 gtatatgaac attaatgtgg ctgcttgagg agaaatttat tcattgaagt caaattggtt
     3421 catgttagaa atgaatatcg tgttagatga tgaaagtatt ttgaagtata ggtaactagt
     3481 tgaaaagtat taattgtacg ataacattaa atttaacagg aagcatagat ataaaatgat
     3541 tcacaattaa aatgagtaaa tttgaacttg ctaaactatt aattggagca tggacatttc
     3601 aaaaataaga gttcaaatca tacacaagct ctgaatcgac actataagat acaaactgta
     3661 taattaaagg tattgttaaa tagaaggaga tatcataaat catggaaaag atgcatatca
     3721 ctaatcagga acatgacgca tttgttaaat ctcacccaaa tggagattta ttacaattaa
     3781 cgaaatgggc agaaacaaag aaattaactg gatggtacgc gcgaagaatc gctgtaggtc
     3841 gtgacggtga aattcagggt gttgcgcagt tactttttaa aaaagtacct aaattacctt
     3901 atacgctatg ttatatttca cgtggttttg ttgttgatta tagtaataaa gaggcgttaa
     3961 atgcattgtt agacagtgca aaagaaattg ctaaagctga gaaagcgtat gcaattaaaa
     4021 tcgatcctga tgttgaagtc gataaaggta cagatgcttt gcaaaatttg aaagcgcttg
     4081 gttttaaaca taaaggattt aaagaaggtt tatcaaaaga ctacatccaa ccacgtatga
     4141 ctatgattac accaattgat aaaaatgatg atgagttatt aaatagcttc gaacgccgaa
     4201 atcgttcaaa agtgcgcttg gctttaaagc gaggtacgac agtagaacga tctgatagag
     4261 aaggtttaaa aacatttgct gaattaatga aaatcactgg ggaacgcgat ggcttcttaa
     4321 cgcgtgatat tagttacttt gaaaatattt atgatgcgtt gcatgaagat ggagatgctg
     4381 aactattttt agtaaagttg gatccaaaag aaaatatagc gaaagtaaat caagaattga
     4441 atgaacttca tgccgaaatt gctaaatggc agcagaagat ggaaacatct gaaaagcaag
     4501 ctaaaaaagc gcaaaatatg attaatgatg cgcaaaataa aattgctaaa aatgaagatt
     4561 taaaacgaga cctagaagct ttagaaaagg aacatcctga aggtatttat ctttctggtg
     4621 cactattaat gtttgctggc tcaaaatcat attacttata tggtgcgtct tctaatgaat
     4681 ttagagattt tttaccaaat catcatatgc agtatacgat gatgaagtat gcacgtgaac
     4741 atggtgcaac aacttacgat ttcggtggta cagataatga tccagataaa gactcagaac
     4801 attatggctt atgggcattt aaaaaagtgt ggggaacata cttaagtgaa aagattggtg
     4861 aatttgatta tgtattgaat cagccattgt accaattaat tgagcaagtt aaaccgcgtt
     4921 taacaaaagc taaaattaaa atatctcgta aattaaaacg aaaatagatt aacgactgaa
     4981 atctgaacgc tcataagact gtcatttgcg ttcagatttt tttacacaat atagaatggt
     5041 tgagtaaaat atttttgaat atagtgaaag agggggaagt actgtgataa aaaaactatt
     5101 acaattttct ttggggaata agtttgctat ctttttaatg gttgttttag ttgtcttggg
     5161 cggtgtatac gcgagtgcta aattgaaatt agaattacta ccaaatgtac aaaatccagt
     5221 tatttcagtt acaacaacaa tgccgggtgc aacgccacaa agtacccaag atgaaataag
     5281 tagtaaaatt gacaatcaag taagatcgtt ggcatatgtg aaaaatgtta aaacgcaatc
     5341 cgtacaaaat gcttcaattg taacagttga atatgaaaat aatacagata tggataaagc
     5401 agaagaacag cttaaaaaag aaatcgataa aattaaattt aaagatgaag ttggtcaacc
     5461 agaattaaga cgtaattcga tggacgcttt tccggtttta gcatattcat tttcaaataa
     5521 agagaatgac ttgaaaaaag taacgaaagt actgaatgaa caattaatac caaaattaca
     5581 aacggtagat ggtgtgcaaa atgcgcaatt aaatgggcag acgaaccgtg aaatcaccct
     5641 taaatttaag caaaatgaac ttgaaaaata tgggttgact gctgatgatg tagaaaacta
     5701 tctaaaaaca gcaacaagaa caacaccact tggattgttc caatttggtg ataaagataa
     5761 atcaattgtt gttgatggtc aatatcaatc tgttgatgct tttaaaaaca taaatattcc
     5821 attaacgttg gcaggaggac aagggcaatc tcaatcccaa agtgacaata aacaaaattc
     5881 agccatgtca gatgttaatc aggcatcacc gcagcaaaat tcaaaagcgt cagcatcaaa
     5941 taatataagt ggtatgccga cagcgaaact aggagattta gctgatatta cagttggtga
     6001 tgtgcgtact tctatttcta aaacgaatgg caaggatgcg gttaatttac aaataactaa
     6061 agctcaagat gccaatacag ttcaagtagc caaagatgta caacgtaaaa ttgatacatt
     6121 cgttgatgaa aataaagatt ttaatgtcac aaaaacaatg gatactgcaa agcctgttga
     6181 gaaatcactt tatacgatgg ttgaaaaagc atcattaggt acaatcgtgg caattatagt
     6241 tattttgctg tttttaagaa acattcgtac gacggcaatt tctattatat ccattccgtt
     6301 atcacttctt atggcgctta ttgctctgaa attgagtgat gtttcattga atatactaac
     6361 gttaggtgca ttaacagtag cgattggacg tgtgatagac gattcgattg tagttgttga
     6421 aaatatttat cgacgcttaa cagattcaga agaacaacta aaaggtggaa atttaattat
     6481 cagtgcgaca actgaagtat ttaaaccaat aatgtcatcg acactagtta ctattatcgt
     6541 ctttttacca cttgtgtttg tatcaggttc agtaggcgaa atgtttagac cttttgcatt
     6601 ggctattgca tttagtttat tagcatcgtt attagtgtca attacactcg ttccagcgtt
     6661 ggcagctaca ctatttaaaa aaggcgttaa acgtcgtaat aaacaatatc aagaaggatt
     6721 aggtgttgtt agtacaacat ataaaaaagt attgcattgg tcactaaatc ataagtggat
     6781 tgtaattata ttaagtacat taattttggt tgcaactatt gtatttggag gaccgagact
     6841 aggcactagc tttatttcag caggtgacga taaattttta gctattactt atacaccgaa
     6901 gcctggtgaa acggagcaag cagtgttgaa tcatgcgaaa gatgttgaaa aatatttaaa
     6961 acagaaaaag catgtaaaaa caattcaata ctcagttggc ggtagtagtc cagtagatcc
     7021 aacgggtagt acaaatagta tggcaatcat ggttgaatat gataatgaca cgcctaattt
     7081 tgatgtagaa gcggataagg ttattaaaca tgcagatggc tttaaacatc ctggagagtg
     7141 gaaaaatcaa gatttaggaa caggtgcagg taataaatct gtagaggtta ctgtgaaagg
     7201 tccatcaatg gatgccataa aatcaactgt aaaagatatt gaacagaaaa tgaaacaggt
     7261 taaaggacta gccaatgtca aatctgattt atcgcaaaca tatgatcagt atgaaattaa
     7321 agttgatcaa aataaagcgg cagaaaatgg tatttctgca agtcaacttg caatgcactt
     7381 gaatgaaaac ttaccagaaa aaacagttac gactgttaaa gaaaatggta aaactgttga
     7441 tgttaaagtc aaacaaaata agcaaacaga ctggtcagaa gataagttga ataatataac
     7501 tttgaaaaag ccgactggtg gtacgattaa attgggagat atcgctacgt tagttaaaac
     7561 aacgacacca agtaaattga cgcaagaaca aggtgattat gcaacgatgg tatctgctaa
     7621 agtaacaaat aaagatgtgg gtggcacaac acgacaagtg atgtctaaaa taaataattt
     7681 ggacaaaccg aataatgtaa aggttaatat cggtggtgca tcagatgata ttaacaatgc
     7741 aatgacacaa ttagcctttg caatgttagc tgcaatcatt atcgtatatt taatcctagt
     7801 tattacattt aaaggtggcc tagcaccatt tacaatttta ttctctttac catttacagt
     7861 tatcggtgta attattgcac tattaatcac aggagaaaca atatcagtac caagtttaat
     7921 tggtatgcta atgttaattg gaattgtagt aacaaatgcc attgtgttaa tagaccgtgt
     7981 cattaataat gagcaacagg gcatggagat gaaagaagca ttaatcgaag caggcggtac
     8041 tagaattaga ccgatattaa tgacggcgat tgcaacaatc ggtgcattag ttcctttgtt
     8101 atttggtcaa gatagctcga ttcttatttc gaaaggatta gctgctacag ttattggtgg
     8161 tttaatttca tcaactttgt taacacttgt agttgtacca gtaatatatg aaattctctt
     8221 tactttaaaa aaacgattca ctaaacgata gataatataa aagccataaa agcggtcatg
     8281 atattgacta cttttatggc tttttaaaat ttgaaaattt agaccttatt tcacgtgcga
     8341 tttaatcgat gtgttaataa aacaatactg gcattcgata tgtaatctga tgataatata
     8401 aggttgcaat tatgttattg catgctttgt ttattactta gaataatacg atggttaaga
     8461 tgaaatatat gacaaagata aataatgaca ttaaattcaa gatgtttacg ccttttagat
     8521 cttttttaag cattttaaat cctgtcactt cgacattacc gactaagagt aataagacga
     8581 taaataccca ccaattctct tttggaaaac tcatcgtcgt taatgctaag acgaataata
     8641 acaacacacc cataataatt ctcaaaatgc gagtaaatac aacttccatt ttaaaaatac
     8701 taataaaact aacaattaga taaagtattg ctagtaaaat cagataaaat tgcatatgat
     8761 aacttcctct ccgtttcaaa gggttcatgt agtacagcag cgtagaaaac ataaataaca
     8821 atgttgggat agatctgcgc gtatgttgtt aatgagacac taaatcataa cgcgacaaca
     8881 tcttgtgatt ctagatgtaa ttgagcgaaa aatgaagcaa ttcatcaata taacgtattc
     8941 agagcaatgc tagtcaaatt tatgtaacga aaagcattta ttgcttgaat gatagattat
     9001 taatcttgca tttgagcacg aacgtttcta atttcatttt caatatcttt aagttgacga
     9061 acaagtgcgg aagtatctaa attcaaagat tcccgttttt ctaagtcacc ttgaagacga
     9121 acataatcat atttaagttc ggctagttgg ttttctaaag acatactata acactccttt
     9181 gaaatataat taagtgcatt taatgtagat tatagcatga aacagtagac ttctaaaata
     9241 tctgtggagt atgttaaagt tataaattat gaaggttatt gaaagaaggg ataacagtga
     9301 cagaacaatt tactatgatt attttattaa ttgcgcttgg ttactttttg aagcgcatta
     9361 attttataaa ggcaacagat agtcaagtca ttgctacatt agttcttaat gtcacactcc
     9421 catctttagt tattgtgaat ttaaacagtg cagaattaaa attgtcattc tccattttac
     9481 caattttaat gattatctat ggtattgtgg cgaaaatgat tgctgtctgg ttttttagaa
     9541 aatatgataa tcacatgcgt ggatcagtag gtatgatgac tggtgctatg aatattggat
     9601 tgtttgcata tccactaatt gaagtgatat ggcctaaaac ggggcttatt tattttggta
     9661 tggctgatat aggtggtgcc tttgtgatgt ttggaattac ttactttgta ggtagctact
     9721 ttagtgaagg tagtgatcaa ttcgatttta aatatttagg taagaaatta ttacaatcag
     9781 tgccactcgt tacatacatt gtaatgttta tattgaatat aagtcacatc catttaccac
     9841 atgtggcaat cgatttcttt agcatacttt cccatgcaaa tatgccgtta tcaatgattt
     9901 tgctaggtgt catgttgaat tttactctgg aaagaaagta tatacgtgct actattaaat
     9961 atttatgttt gcattatgga ttagcattaa ttgcgggatt gttagtacat gtgttgttac
    10021 cggtatcaga tgatatgatt aagacgacat tgttggtcac ttggatgttc ccggttggtg
    10081 tcgcaattat ttcttatggt attcagttta aatatcgaac actgccattt ataggtatga
    10141 cgaccaattt aacaatcatt attagtatca ttattttgta cgtgtatcag gcagtgtttg
    10201 tctagtttac acatttgaag ataaaatcga ttttagtatt cgtagaaaat gagagccccc
    10261 tttaccacaa catgtaaatg catattgtga aaagggggct tttatttatg acatagttgt
    10321 tcaacaggct gagacataaa tcaatattct atgctctacg aagttatatt ggcagtagtt
    10381 gactgaacga aaatgcgctt gtaacaagct tttttcaatt ctagtcaacc ttgccggggt
    10441 gggacgacga aataaatttt gcgaaaatat catttctgtc ccactcccta tgcagctatc
    10501 cacttgatgt atatggcaca tacttgataa atgaatatca tcaagatttt aaaagtatcg
    10561 ctaattttaa attcttaaaa cgcatgatta atgtcatgat gtgttattgc gttttgtttt
    10621 tagagccatg tatttcctgg gacatataga ggaacattca acgtaaaatt ctcgaaaatt
    10681 aattttaatc attctataag tgaatggtta ttttcagaag cgataacatt tttacgttac
    10741 atgagtattt aactttctat ttcaaattac ctagaattat agcggctatc acgataataa
    10801 taatacctgc ccaaatacca gtcatctgac gacgatcttt tctttctcct aaaatgaaaa
    10861 taccgcctaa ggttgaaacg ataacaagta actgtgataa tgagaaactt gtagctacac
    10921 caacttttgg ttgagaatag aacatgaaca agttaccaat tccccaaatc acacctggca
    10981 atagattaag tgctgttgat ttaagtgatg ttttatgatt catggatagg ataaagccac
    11041 caattgccat accgacagat tggaagaaca atgcatcagt tccaccaaca ccgaagatgt
    11101 caccaagtac aacgaaacct acatatccaa ctgtagatac aattaaaata cccattgctt
    11161 ttttaaattc aggattatct gattgacgtt catttttagc tttaagtgaa gtaagtgcta
    11221 caccagtaac taataatatc atggcgatta aaccaaagat aatttgagtc attgaagacc
    11281 attcacctaa aaagataacg ctgaataatg ttgtaccaac taattgcata cctgtagaaa
    11341 ctggcatagt atttgataca ccgattaaac taatagattt aagctgattc gcttgtccaa
    11401 acgcccataa tgcaccagaa ataagaccga caataattac agtaggatta ttgaattttg
    11461 cgaaaccagt aataagtaaa cctaatccaa caatgagtgc gcctagcgtc gtaccacgaa
    11521 tttggttgta aggtccaccg ccgacgaaaa cattaataag aacgacactt ccccagaata
    11581 aagcaggtaa aagtgcgatt aagaaatcaa gaaattgcaa gactactcac tctcctatac
    11641 tatttatgca agtgctcccc ttaattgaca cttgcatgtt attgtaaagc attctgccct
    11701 aatagtaaaa aacaactact tataattttc aatatttaca aaaagtataa aaacccacaa
    11761 tacatgctaa ttatgtactg tggggtattt gcttggtatt ttattcaggg attgtttgat
    11821 cttttacgtt acgtgattcg aatttgaatt taatgtactc atagttgata tggaaaccta
    11881 gaccattaaa tcgttcgatg agtttattat ttttattacg aattttaaaa taaacttttc
    11941 taatatcaaa gttatcaaaa gcatattgca atgcatacgc aagtaactcg aaagcgatac
    12001 ctttcaaacg gtaatctaca tgagaactga agtatttaat ctcggcgatt gactgttgtg
    12061 aatcaatttc aaggtataaa taacctttaa gtaaaccttc gctaacaaat aaaaacaaat
    12121 gatgatggtc gtctaaacta tcaatgatat cttgcggtga atgtgcctga tatttaaatg
    12181 tagttgtgtg taatttgctg aaagcacgat aaaacccttt gtgataagga atgatatttg
    12241 gttggtgcat atcttcttct aatcttgtac gggcttctat gtaatagtca gtgaagttat
    12301 aacttgcttg aataactttc attaatggtt tgtattgttg aatgccttct tcaaaagaaa
    12361 agttaaagac agcatcgtca ggttgattcg aagtcattgt tttaaacagc gtttcaaacg
    12421 tttcgacaga taatacataa ttgtcagcca cgaaagggcc tatgactttg aatttatttt
    12481 tatcgtatgc aaaagacaat atgattgctt tgattgaatc gttttcttta atcgaaaata
    12541 caccaggtga ttcaatcgca tcggttatta atacatctat ttcattgtac tgttgaggaa
    12601 gtttatataa atatgatgct gattcataat tcgaatgttc aatgaacgat tttatttgtg
    12661 taatatcata taactgaact atgctcatgt cattacctcc gtactttttg ttacttttat
    12721 tatatagtat ttcaactgaa atgaaagtta atagtgatat taacatgtta caatacattt
    12781 aacacatcat ttgcaatcat tgaatttaaa tcaaagatta gtggaataga tgaagcacgt
    12841 tcgatataaa agaacgtaag agaaaggata atttatgaaa tctttaatat tagctgaaaa
    12901 accatcagtc gcaagagata ttgctgatgc tttacaaata aatcaaaagc gtaatggtta
    12961 ctttgaaaac aaccaatata ttgtcacgtg ggcgttaggt catctagtga caaatgcgac
    13021 acctgaacaa tacgataaaa atttaaagga atggcgatta gaagaccttc caattatacc
    13081 taaatatatg aaaactgttg ttattggtaa aacaagcaaa caatttaaaa cagtaaaagc
    13141 gttaatttta gataataaag tgaaagatat tattattgcg acagatgctg gacgagaagg
    13201 tgaactagtt gcaagattga ttttggataa agttggtaac aaaaagccac tccgtcgatt
    13261 atggattagc tcagttacta aaaaagctat tcaacaaggg tttaaaaatt taaaagacgg
    13321 tcgtcaatat aacgatttgt attatgcagc gttagcgaga agtgaggcag attggattgt
    13381 tgggattaat gcaacgcgtg cactaacaac aaagtatgat gcacagctat ccctgggacg
    13441 tgttcagaca ccaacgattc aattagtaaa tacacgacaa caagagatta atcagttcaa
    13501 accacaacaa tactatacat tatcattaac ggtaaaaggg tttgattttc agctagaatc
    13561 aaatcagcga tataccaata aagaaacttt agaacagata gttaataatt tgaaaaatgt
    13621 cgatggtaag attaaatctg ttgctactaa acataagaag tcgtatccgc aatcactgta
    13681 caatttaaca gatttacaac aagatatgta tagacgttat aaaattggac ctaaagaaac
    13741 attgaataca cttcaaagtt tatatgagag acataaagtc gtaacctatc caagagcaga
    13801 ttcaaactat ttaacaaccg atatggtaga tactatgaaa gaacgtattc aggcgacgat
    13861 ggcaacaaca tataaagacc aagcacgccc attaatctct aaaacatttt catcaaaaat
    13921 gtcgatattt aataatcaaa aagtatctga tcaccatgca attattccta cagaagtgag
    13981 acctgtcatg tcagacttaa gtaatagaga attaaagtta tacgatatga ttgtcgagcg
    14041 ttttttagaa gctttaatgc ctccgcacga gtatgacgcg ataactgtaa ctttagaggt
    14101 tgcagggcac acatttgttt tgaaagagaa tgtagcaact gtattaggct ttaaatctat
    14161 tagacaaggt gaatctatta cagagatgca acagcctttt tcagaaggcg atgaagtgaa
    14221 gattttaaaa acaaacatta gagaacacga aacaacacct ccagaatatt ttaatgaagg
    14281 ttcgttatta aaagcgatgg agaaccctca gaactttatt caattgaagg ataaaaaata
    14341 tgcgcaaact ttaaaacaaa caggtggtat cggcacagtt gcaacaaggg ccgacattat
    14401 cgataaatta tttaatatga atgctattga atcaagagac ggtaaaatta aagtaacgtc
    14461 aaaaggtaaa caaatattag aattagcacc agaagaatta acgtcgccac ttttaactgc
    14521 acaatgggaa gaaaaactac ttttaattga acgtggtaaa tatcaggcga aaacattcat
    14581 taatgaaatg aaagatttta cgaaagatgt tgtaaatggg attaaaaata gtgatcgtaa
    14641 atataaacac gataatttaa caaccactga atgcccaacg tgtggtaaat tcatgattaa
    14701 agttaaaact aaaaatggtc agatgcttgt gtgccaagat ccatcttgta agacgaaaaa
    14761 gaatgtacag cgcaaaacaa atgcaagatg tccaaactgt aaaaagaaat taacgttgtt
    14821 tggtaaaggg aaagaagcgg tatatcgttg tgtttgtgga cattctgaaa cgcaagcaca
    14881 tatggatcag cgtatgaagt ctaaatcctc tggtaaagta tctcgtaaag aaatgaaaaa
    14941 gtatatgaat aaaaatgaag gtttagacaa taatccgttt aaagatgcat taaagaactt
    15001 gaatttatag ataaaatcga acaaagttga atcagaaaat cgaaaagttc gcttttggta
    15061 ttgtttttta ttaagaatga tattaaacta ttaaggtatt ttaaaaaaag gagcatccat
    15121 tcgtgaaaaa ctatttccag ttcgataaat atggaacaaa ctttaaaaga gaaatcttag
    15181 gcggtatcac aactttctta tctatggcct atattttagc agttaacccg caagttttaa
    15241 gtttagcagg tgttaaaggc gtatcagaag atatgaaaat ggaccaaggt gccatttttg
    15301 tagcgactgc attagcagca tttgtaggct cgctattcat ggggctaata gctaaatatc
    15361 caattgcgtt agcaccaggt atgggattaa atgcattctt tgcatttact gttgtgttaa
    15421 ccatgggtat tccttggcaa gttggtttaa caggtgtttt attctcaggt atattctttg
    15481 cgatattaac cgtcacaggg tttagggaag ttattattaa tgcaattcct tatcaaatga
    15541 agatggctgt ttcagcaggt ataggattat ttattacatt tgtaggttta caaagttcgg
    15601 gtattatagt taaaaatgaa tctacattag taacattggg acatttaact gatccaccag
    15661 tacttttagc gatattcggt atcgttatta cagttatttt atatgcaatt aaattgccgg
    15721 gttctatctt tatcggtatg atcatcacag caatcgttgg tatgttcact ggattgattc
    15781 aaatgccaac tggtattgta ggtaagattc caagtattga accaacgttc ggtgctgcat
    15841 ttgaagcgtt taaagaccca agtcaattat taacgataca gttcttaatt gttattttaa
    15901 cgttcttatt tattgatttc tttgatacag ctggtacatt agtagccgtt gctactcaag
    15961 caggtattat gaaagataat aaattaccaa gagctggtag agcattgttc tcagattctt
    16021 tagctacgat tgtagggtca gtttttggaa caactacaac aacttcttat atcgaatcaa
    16081 cttcaggtgt tgctgtaggt gctagaacag gatttgctag tatcgtaaca ggttgttgtt
    16141 tcctattagc gctattcttt agtccgttaa tcgctgttgt aacaagtgca gttacaacac
    16201 cagctttagt ggtggtaggt gtattaatgg ctgcaaactt tgctgagata aactggaaaa
    16261 gttttgaagt tgcagtacca gcattcatta caatcattat gatgccttta tcatattcaa
    16321 ttgcaactgg tattgcgtgt ggatttattt tctatccaat tacaatgctt atttctaaaa
    16381 aacataaaga agtacatccg ataatgtatg tattaatggt actattcatt ctgtacttca
    16441 tatttgttca tggttaaatc cagacacaaa aaacgactgc caatgattgg tagtcgtttt
    16501 tttctttgaa gtaaggataa aataagaagc gaaataacat aaagcgatat tatgaatgtc
    16561 tttaaatatc cgatataaat atacttcttt taaaattgtt gaacgtgttt cttctatatt
    16621 atatatacct aattaaaaag gttttaagaa ttattctcta tgtccatctt tgtattgtgt
    16681 gtaaatgaca cgagcatttt tattaggtat ataggttggc gctgataata caactaggac
    16741 aaatagaatc attaggaaaa ataaaatcca atgaatcaaa attcctaaga aggggataat
    16801 agctaaaaaa ctacctacta taccaaatat tggaataatc gctataggtc taatcgcatt
    16861 ttgtctattc actaataata taatagtaag aattagataa agtaatgcat taaagagtaa
    16921 aggctgccat ccaaaactta aaataaacgt tgcacctaaa aaaggaatgc catagaaaaa
    16981 ctcacaaagt attaaaaaga tacctataag tgctaaagat aattttggtc catttttcat
    17041 attcattcac caccgttctt atgactaatt atatagaata attttcaatg ataataataa
    17101 aatgattcaa ggtacgaatt tacaataaag aaggaaataa aaaatatctc gaaaatagtt
    17161 gaactgacta agtatataaa gtaaaatata aaagtatgtg ttagacagat agaaaaatta
    17221 tgtgaaaagc cttgatttat cgatgttttt cgtgtaatat aactaacgtt ggactttaag
    17281 aaaagcgatg aagcgaaagg ttactgacac acccggccgc tttgccatgg cgctgtgtaa
    17341 gatagttttc gtggagaagt ctatcactaa atgtagacga ataaggaggg aaaattatgg
    17401 caaaacaaaa aatcagaatc agattaaaag cttatgatca ccgcgtgatt gatcaatcag
    17461 cagagaagat tgtagaaaca gcgaaacgtt ctggtgcaga tgtttctgga ccaattccgt
    17521 taccaactga gaaatcagta tacacaatca tccgtgccgt gcataagtat aaagattcac
    17581 gtgaacaatt cgaacaacgt acacataaac gtttaatcga tattgtaaac ccaacaccaa
    17641 aaacagttga cgctttaatg ggcttaaact taccatctgg tgtagacatc gaaatcaaat
    17701 tataatagac aattttagga ggtggacttt cgatgaccaa aggaatctta ggaagaaaaa
    17761 ttgggatgac acaagtattc ggagaaaacg gtgaattaat ccctgtaaca gtagtagaag
    17821 ctaaagaaaa tgttgtatta caaaagaaaa ctgtagaagt tgatggatac aacgcaatcc
    17881 aagttggatt tgaagacaaa aaagcataca aaaaagatgc aaaatctaat aaatatgcta
    17941 ataaaccagc tgaaggtcac gctaaaaaag ctgacgcagc acctaagcgc ttcattcgtg
    18001 aattccgcaa tgtagacgtg gatgcttacg aagtaggtca agaagtctca gtagatactt
    18061 ttgtagctgg cgacgttatt gacgtaacag gcgtatcaaa aggtaaaggt ttccaaggtg
    18121 caattaaacg ccacggacaa tctcgtggac ctatgtcaca cggttctcat ttccacagag
    18181 caccaggttc tgtaggtatg gcttcagatg cttctagagt attcaaaggc caaaaaatgc
    18241 caggacgcat gggtggaaac actgtaactg tacaaaactt agaagtagtt caagttgaca
    18301 cagaaaacaa agttatctta gtaaaaggta acgtacctgg acctaaaaaa ggtttagtag
    18361 aaatcagaac ttcaattaaa aaaggtaata aataataaga agtgaaagga ggaaatgcat
    18421 aatggctaat tatgatgttt taaaattaga cggaactaaa tcaggttcaa tcgaattaag
    18481 cgatgcagta ttcggtattg agccaaataa tagcgtttta ttcgaagcta ttaatttaca
    18541 acgtgcttca ttacgtcaag gtacgcatgc tgttaagaat cgttcagcag taagcggtgg
    18601 cggacgtaaa ccatggaagc aaaaaggaac aggtcgtgct cgtcaaggta caatccgtgc
    18661 tccacaatgg cgtggcggtg gtatcgtatt cggaccaact ccaagaagtt atgcatacaa
    18721 aatgcctaag aaaatgcgtc gtttagcttt acgctcagca ttatctttca aagctcaaga
    18781 gaatggctta actgtagttg acgcattcaa cttcgaagct ccaaaaacta aagaattcaa
    18841 aaatgtatta tctacattag aacaacctaa aaaagtatta gtagttactg aaaacgaaga
    18901 tgtaaatgtt gaattatcag cacgcaacat ccctggcgtt caagtgacaa ctgctcaagg
    18961 tttaaatgtt ttagatatca ctaatgctga cagcttagta attactgaag ctgctgctaa
    19021 aaaagttgag gaggtgctcg gataatggaa gcaagagata ttcttaagcg ccccgtaatc
    19081 actgagaaat cttctgaagc aatggctgaa gacaaataca ctttcgacgt tgatactcgt
    19141 gttaacaaaa cacaagtaaa aatggcagtt gaagaaatct tcaacgtaaa agttgcaagt
    19201 gttaatatca tgaattacaa acctaagaaa aaacgtatgg gccgttacca aggctataca
    19261 aacaaaagaa gaaaagcgat tgtaactctt aaagaaggat caatcgactt atttaactaa
    19321 taaaacaatt accattaagg aggtaagcga caatggctat taaaaagtat aagccaataa
    19381 caaatggtcg tcgtaatatg acttcgttag atttcgcaga aatcacgaaa actacacctg
    19441 aaaagtcatt attaaaaccg ctaccgaaaa aagcgggacg taacaaccaa ggtaaattga
    19501 ctgtaagaca ccatggtggt ggacacaaac gtcaataccg tgttatcgat ttcaaacgta
    19561 acaaagatgg tatcaatgca aaagttgatt ctattcaata tgatccaaac cgctcagcaa
    19621 acattgcttt agttgtatat gcagacggtg aaaaacgata tatcattgct cctaaaggat
    19681 tagaagtagg tcaaatcgtt gaaagtggtg ctgaagctga catcaaagtt ggtaacgcat
    19741 taccattaca aaacattcca gttggtacag tagtacacaa catcgagctt aaacctggta
    19801 aaggtggaca aatcgctcgt tcagctggtg caagtgctca agtacttggt aaagaaggta
    19861 aatacgtatt aatcagatta agatctggtg aagttcgtat gatcttatct acttgccgtg
    19921 ctacaatcgg tcaagttggt aacctacaac acgaattagt taacgttggt aaagccggac
    19981 gttcaagatg gaaaggtatc cgtccaacag ttcgtggttc tgtaatgaac cctaacgatc
    20041 acccacacgg tggtggtgaa ggtcgtgctc ctatcggtag accatctcca atgtcaccat
    20101 ggggtaaacc tacgcttggt aagaaaactc gtcgtggtaa aaaatcatca gacaaactta
    20161 tcgttcgtgg acgtaagaaa aaataatata atcaacttat ttgggtgtgc ggcttaaagc
    20221 tgcacgcaca taataagaag ggaggcgccc aaatggctcg tagtattaaa aaaggacctt
    20281 tcgtcgatga gcatttaatg aaaaaagttg aagctcaaga aggaagcgaa aagaaacaag
    20341 taatcaaaac atggtcacgt cgttctacaa ttttccctaa tttcatcgga catacttttg
    20401 cagtatacga cggacgtaaa cacgtacctg tatatgtaac tgaagatatg gtaggtcata
    20461 aattaggtga gtttgctcct actcgtacat tcaaaggaca cgttgcagac gacaagaaaa
    20521 caagaagata atatctatta agtagaggag gacatcctaa tggaagcaaa agcggttgct
    20581 agaacaataa gaatcgcacc tcgtaaagta agactagttc ttgacttaat cagaggtaaa
    20641 aatgctgctg aagctattgc aattttaaaa ttaacaaaca aagcttcatc accagtaatt
    20701 gaaaaagtat taatgtccgc tttagctaat gctgaacata actatgacat gaacacagat
    20761 gaattagtag ttaaagaagc atatgctaac gaaggaccaa cattaaaacg tttccgtcca
    20821 cgtgcgcaag gtcgtgcaag tgcgattaac aaacgtacaa gccacattac aatcgtcgta
    20881 agtgacggta aagaagaagc taaagaagct taattaactt ttaaggaggg aatactgtgg
    20941 gtcaaaaaat taatccaatc ggacttcgtg ttggtattat ccgtgattgg gaagctaaat
    21001 ggtatgctga aaaagacttc gcttcacttt tacacgaaga tttaaaaatc cgtaaattta
    21061 ttgataatga attaaaagaa gcatcagttt ctcacgtaga gattgaacgt gctgcaaacc
    21121 gtatcaacat tgcaattcat actggtaaac ctggtatggt aattggtaaa ggcggttcag
    21181 aaatcgaaaa attacgcaac aaattaaatg cgttaactga taaaaaagta cacatcaacg
    21241 taattgaaat caaaaaagtt gatcttgacg ctcgtttagt agctgaaaac atcgcacgtc
    21301 aattagaaaa ccgtgcttca ttccgtcgtg tacaaaaaca agcaatcact agagctatga
    21361 aacttggtgc taaaggtatc aaaactcaag tatctggtcg tttaggcgga gctgacatcg
    21421 ctcgtgctga acaatattca gaaggaactg ttccacttca tacgttacgt gctgacatcg
    21481 attatgcaca cgctgaagct gacactactt acggtaaatt aggcgttaaa gtatggatct
    21541 atcgtggaga agttcttcct actaagaaca ctagtggagg aggaaaataa taatgttact
    21601 accaaaacgt gtaaaatatc gtcgtcaaca tcgtcctaaa acaactggtc gttctaaagg
    21661 cggtaactac gtaacatttg gtgagtttgg tttacaagct acaacaacgt cttggatcac
    21721 atctcgtcaa atcgaatctg ctcgtatagc aatgacacgt tacatgaaac gtggcgggaa
    21781 agtttggatt aaaatcttcc cacatacacc atatactaaa aaacctttag aagtacgtat
    21841 gggtgctggt aaaggtgcgg ttgaaggctg gatcgcagtt gtaaaaccag gtagaatttt
    21901 attcgaagtt gctggcgttt ctgaagaagt tgcgcgtgaa gcactacgtt tagcaagtca
    21961 caaacttcca gtaaaaacta agtttgtaaa acgtgaggaa ttgggtggtg aaacaaatga
    22021 aagctaagga aattagagac ttaaccactt cagaaatcga agaacaaatc aaatcttcaa
    22081 aagaagagct ttttaaccta cgctttcagt tagctacagg tcaattagaa gaaactgcac
    22141 gtattcgtac agtaagaaaa acgattgcac gtctaaaaac tgttgctcgt gaaagagaaa
    22201 ttgaacaaag taaggctaat caataattaa gtaagaggag gttacaaaag tgagcgaaag
    22261 aaacgatcgt aaagtttatg taggtaaagt tgtttcagac aaaatggaca agactattac
    22321 agtacttgtt gaaacttaca aaacacacaa attatacggt aaacgagtaa aatactctaa
    22381 aaaatacaaa actcatgatg aaaacaattc agctaaatta ggagacattg ttaaaattca
    22441 agaaactcgt cctttatcag caacaaaacg ttttcgttta gtagagattg ttgaagagtc
    22501 agtaattatt taatacaagt atagagataa gggaggttta actaatgatc caacaagaaa
    22561 cacgcttgaa agtagcagac aactctggtg ctcgtgaagt tcttacaatc aaagtattag
    22621 gtggatctgg tcgtaaaaca gcaaacatcg gcgatgttat cgtatgtact gttaaaaatg
    22681 caacaccagg tggcgttgtt aaaaaaggtg acgttgtcaa agctgtaatc gtacgtacta
    22741 agtcaggtgt tcgtcgtaat gacggttcat acatcaaatt tgatgaaaat gcatgtgtta
    22801 tcatccgtga tgacaaaggc ccacgtggta ctcgtatctt cggacctgtt gctcgtgaat
    22861 tacgtgaagg taacttcatg aaaatcgtat cattagcacc agaagtactt taattaataa
    22921 caaccaatac aaataaggag gtgcccacat gcatatcaaa aaaggtgaca acgttaaagt
    22981 tatcgcaggt aaagacaaag gtaaagaagg taaagtaatc gctactctac ctaaaaaaga
    23041 ccgtgtcgtt gtggaaggtg ttaacattat gaaaaaacac caaaaaccaa ctcaattaaa
    23101 tcctgaaggt ggaatcttag aaacagaggc agcaatccat gtttctaatg tacaattatt
    23161 ggaccctaaa acaaacgaac caactcgtgt aggttacaaa tttgttgatg gtaaaaaagt
    23221 tcgtatcgct aaaaaatctg gcgaagaaat taaatctaat aattaataac aagttgaaag
    23281 gaggatccca ctttgaaccg tttaaaagaa aagtttaaca ctgaagttac tgaaaactta
    23341 atgaaaaaat tcaattatag ttcagtaatg gaagtaccaa aaatagataa aatcgttgtg
    23401 aacatgggtg taggtgacgc agtacaaaat tctaaagtat tagacaatgc tgttgaagaa
    23461 ttagaattga tcactggtca aaaaccatta gtaactaaag ctaaaaaatc aatcgcgact
    23521 ttccgtttac gtgaaggtat gccaatcggt gcgaaagtaa cacttcgcgg tgaaagaatg
    23581 tatgaattct tagacaaatt aatttcagta tcattaccac gtgtacgtga cttccaaggt
    23641 gtttctaaaa aagcatttga cggacgcggt aactacactt taggtgttaa agaacaatta
    23701 attttcccag aaatcgacta tgataaagta agtaaagtta gaggaatgga tattgttatc
    23761 gtaacgactg ctaacactga tgaagaagct cgtgaattgt tagctaactt cggtatgcca
    23821 ttccgtaaat aattatttaa aggaggctaa ttaagtggct aaaacttcaa tggttgctaa
    23881 gcaacaaaaa aaacaaaaat atgcagttcg tgaatacact cgttgtgaac gttgtggccg
    23941 tccacattct gtatatcgta aatttaaatt atgccgtatt tgtttccgtg aattagctta
    24001 caaaggccaa atccctggcg ttcgtaaagc tagctggtaa taaaaaagag tctgaaagga
    24061 ggcaacaatc aatgacaatg acagatccaa tcgcagatat gcttactcgt gtaagaaacg
    24121 caaacatggt gcgtcacgag aagttagaat tacctgcatc aaatattaaa aaagaaattg
    24181 ctgaaatctt aaagagtgaa ggtttcatta aaaatgttga atacgtagaa gatgataaac
    24241 aaggtgtact tcgtttattc ttaaaatatg gtcaaaacga tgagcgtgtt atcacaggat
    24301 taaaacgtat ttcaaaacca ggtttacgtg tttatgcaaa agctagcgaa atgcctaaag
    24361 tattaaatgg tttaggtatt gcattagtat caacttctga aggtgtaatt actgacaaag
    24421 aagcaagaaa acgtaatgtt ggcggagaaa ttatcgcata cgtttggtaa taaaaaataa
    24481 ggaggtgcca taacatgagt cgtgttggta agaaaattat tgacatccct agtgacgtaa
    24541 cagtaacttt tgatggaaat catgtaactg ttaaaggtcc taaaggtgaa ttatcaagaa
    24601 ctttaaatga aagaatgaca ttcaaacaag aagaaaacac aattgaagtt gtaagaccat
    24661 ctgattctaa agaagataga acaaaccatg gtacaactcg tgctttatta aacaatatgg
    24721 tacaaggtgt ttctcaagga tacgtaaaag tacttgaact tgttggtgta ggttaccgtg
    24781 ctcaaatgca aggtaaagac ttaatcctta acgttggtta ttctcaccca gtagaaatta
    24841 aagctgaaga aaacattact ttctcagttg agaaaaacac agtcgttaaa gttgaaggta
    24901 tttcaaaaga acaagttgga gcattagcat ctaacatccg ttcagtaaga cctccagagc
    24961 cttacaaagg taaaggtatt cgttaccaag gtgaatacgt tcgccgtaaa gaaggtaaaa
    25021 ctggtaaata atagataaac tctaaagaaa ggagtattga aatgatcagt aaaattgata
    25081 aaaataaagt gcgtttaaaa agacatgctc gtgttcgtac taacttatca ggtacagctg
    25141 aaaagccacg tttaaacgta tatcgttcaa acaaacatat ctacgctcaa attattgatg
    25201 ataataaagg cgtaacatta gctcaagctt cttcaaaaga cagcgacatt gctactacag
    25261 caactaaagt tgaattagca actaaagtcg gtgaagcaat tgctaaaaaa gctgctgaca
    25321 aaggcattaa agaaatcgta tttgaccgtg gaggatattt atatcacgga cgtgttaaag
    25381 cattagctga agcagcaaga gaaagcggat tagaatttta atttaaagga gggacaaata
    25441 catggctcgt agagaagaag agacgaaaga atttgaagaa cgcgttgtta caatcaaccg
    25501 tgtagcaaaa gttgtaaaag gtggtcgtcg tttccgtttc actgcattag ttgtagttgg
    25561 agacaaaaat ggtcgtgtag gtttcggtac tggtaaagct caagaggtac cagaagcaat
    25621 caaaaaagct gttgaagcag ctaaaaaaga tttagtagtt gttccacgtg ttgaaggtac
    25681 aactccacac acaattactg gccgttacgg ttcaggaagc gtatttatga aaccggctgc
    25741 acctggtaca ggagttatcg ctggtggtcc tgttcgtgcc gtacttgaat tagcaggtat
    25801 cactgatatc ttaagtaaat cattaggatc aaacacacca atcaacatgg ttcgtgctac
    25861 aatcgatggt ttacaaaacc ttaaaaatgc tgaagatgtt gcgaaattac gtggcaaaac
    25921 agtagaagaa ttatacaatt aaggagggaa aactagttat ggctaaatta caaattaccc
    25981 tcactcgtag tgttattggt cgtcctgaaa cacaacgtaa aactgttgaa gctttaggtc
    26041 ttaaaaagac taacagttca gtagttgttg aagataaccc tgctattcgt gggcaaatca
    26101 acaaagttaa gcacttagta acagtagaag aaaaataatc aaggaggtgc cgaaatgaaa
    26161 ttacatgagt taaaaccggc agaaggttca cgtaaagaac gcaatcgtgt tggacgtggt
    26221 gttgcgacag gtaacggtaa aacaagtggt cgcggacaca aaggtcaaaa agctcgttca
    26281 ggcggtggtg taagaccagg attcgaaggt ggtcaattac cattattccg tcgtttacca
    26341 aaacgtggtt ttactaacat aaatcgtaaa gaatatgcta ttgttaactt agaccaactt
    26401 aataaatttg aagatggtac tgaagtaact ccagctttat tagtagaatc tggtgttgtt
    26461 aagaatgaaa aatctggtat caaaatacta ggtaatggtt cacttgataa gaaattgaca
    26521 gtgaaagctc ataaattctc agcttcagca gcagaagcta ttgatgctaa aggtggagca
    26581 cacgaggtga tctaatgatt caaacccttg tgaacttctt tagaacaaaa gaggttcgta
    26641 acaagatttt cttcacacta gcaatgttag taatttttaa aatagggact tatataccag
    26701 ctccaggagt taatcctgca gcttttgata atccccaagg ttctcaaggt gccactgagt
    26761 tattaaatac ttttggtggc ggagccttga aacgattttc tatttttgca atgggtattg
    26821 taccctacat cactgcatca atcgtaatgc aattattaca aatggatatt gtccctaaat
    26881 tctcagaatg ggcaaaacaa ggtgaagtag gtagaagaaa gttaaataac gttactcgtt
    26941 atttagcaat ttctttagca tttatccaat ctataggtat ggcattccaa tttaataatt
    27001 atctcaaagg tgcgctgatt atcaatcagt caattatgag ttatttatta atagcactag
    27061 ttttgacagc aggaactgct ttcttaatat ggcttggtga tcaaatcact cagttcggtg
    27121 ttggtaatgg tatttctatt atcatatttg cgggtatttt atcaacgttg ccagccagtc
    27181 taattcaatt tggacaaact gcgttcgttg ggcaagaaga tacatcatta gcatggttga
    27241 aagtattagg acttttagtg tcactgatat tattaactgt aggtgctatt tatgtacttg
    27301 aagccgttcg taaaattccg attcaatatg ctaagaaaca aactgctcaa agattaggtt
    27361 cacaggcaac ttatctacct ttaaaagtga actcagccgg tgttattcct gtaatctttg
    27421 caatggcgtt cttcttactg cctagaacat taacgttgtt ctatccagat aaagaatggg
    27481 cacaaaacat tgcgaatgct gcaaatcctt caagtaatgt tggtatggtt gtatatattg
    27541 tactaattat actattcaca tacttctatg catttgtaca agttaatccg gaaaaaatgg
    27601 ctgataacct taagaaacaa ggtagctatg ttccaggtat tagacctggt gaacaaacca
    27661 aaaagtatat tactaaagtt ttatatcgtt taacttttgt aggttctatc ttcttagccg
    27721 ttatttcaat tctaccgata ttagcaacta agtttatggg attaccacaa tcaattcaga
    27781 ttggtggtac aagtttactt atcgttattg gtgtagcgat tgaaacaatg aaatctttag
    27841 aagctcaagt atctcaaaaa gaatataaag gctttggtgg tagataattt taggagggca
    27901 cttatgaata tcattttgat gggtttacct ggcgcaggta aaggaactca agcaagtgaa
    27961 attgtcaaga aattcccaat accccacatt tcaactggtg acatgttcag aaaagctata
    28021 aaagaagaaa ctgaattagg taaagaagct aagtcttata tggaccgtgg cgaattagtt
    28081 cctgatgaag tgactgtagg tatcgttaag gaaagaattt ctgaagacga tgcaaaaaaa
    28141 ggctttttat tagatggctt cccaagaaca atcgagcaag ctgaggcatt aaataatatt
    28201 atgtctgagc ttgacagaaa cattgatgct gtcatcaata tcgaagttcc ggaagaagaa
    28261 ttaatgaacc gtcttacagg tcgtcgaatc tgtgagtcat gtggtacaac gtatcatctt
    28321 gtatttaatc ctccgaaggt cgaaggtatt tgtgatatcg atggtggtaa attgtatcaa
    28381 cgagaagatg ataatcctga aacggtagct aatcgtttga gtgttaatat taaacaatct
    28441 aagcctattt tagatttcta tgatcaaaaa ggtgtattga aaaatattga tggttcaaaa
    28501 gatattagcg acgttaccaa agatgtcatt gatattttag atcatttgta atagatcaac
    28561 ttttagcggt ctattttaag tgaggcatga tttaatcata ttagatagat gagagtggca
    28621 attaacgata attaattccc gtaatttttg tttaacttat aaaattaatc actgatagat
    28681 tcgtaacaat aaagttgtct attgacgatt accttactat tgcaaaaagg gggaagttaa
    28741 tcaatggcta aacaagatgt aattgaatta gaaggtactg tattagatac tttaccgaac
    28801 gcaatgttta aagtagaatt agaaaatggt catgagattt tagctcacgt aagtggtaaa
    28861 atcagaatga attacattcg tattctacct ggcgacaaag taactgttga gatgtctccg
    28921 tacgatttaa cacgcggaag aattacttat cgttataaat aatcgtcact ccataatata
    28981 gggaggtata aaaatgaaag taagaccatc agtaaaacct atttgcgaaa aatgtaaagt
    29041 cattaaacgt aaaggtaaag taatggtaat ttgtgaaaat ccaaaacaca aacaaagaca
    29101 aggttaataa aagagaggtg taaattaata tggcacgtat tgcaggagta gatattccac
    29161 gtgaaaaacg cgtagttatc tcattaactt atatatacgg tatcggtacg tcaactgctc
    29221 aaaaaattct tgaagaagct aacgtatcag ctgatactcg tgtgaaagat ttaactgatg
    29281 acgaattagg tcgcatccgt gaagttgtag acggttataa agtcgaaggt gacttacgtc
    29341 gtgaaactaa cttaaatatc aaacgtttaa tggaaatttc atcataccgt ggtatccgtc
    29401 accgtcgtgg tttaccagtt cgtggtcaaa aaacgaaaaa caacgcgcgt actcgtaaag
    29461 gaccagttaa aacggtagct aacaagaaaa aataataggt aaaggaggca aattttaaat
    29521 ggcacgtaaa caagtatctc gtaaacgtag agtgaaaaag aatattgaaa atggtgtagc
    29581 acacatccgt tcaacattca acaacactat tgtaactatc actgatgagt tcggtaatgc
    29641 tttatcatgg tcatcagctg gtgcattagg attcaaagga tctaaaaaat caacaccatt
    29701 tgcagcacaa atggcttctg aaactgcatc taaatcagct atggagcatg gtttaaaaac
    29761 agttgaagta acagttaaag gacctggtcc aggtcgtgaa tcagctattc gtgcattaca
    29821 atctgcaggt ttagaagtaa ctgcgatcag agacgttact ccagtacctc ataacggttg
    29881 tcgtccacca aaacgtcgtc gtgtataatt tatgatggta ttgttacagg tcactgagca
    29941 aacattttaa attaagtcga cgtatataag gaggatattt aaatgataga aatcgaaaaa
    30001 cctagaattg agacaattga aattagtgaa gatgctaaat tcggtaagtt cgttgttgaa
    30061 ccactagaac gtggctacgg tactacacta ggaaactcct tacgtcgtat cctactatct
    30121 tcattaccag gtgcagccgt taagtatatt gaaattgagg gagttttaca tgaattctca
    30181 gcagtagaca atgtagttga agatgtttct acaattatta tgaacattaa acaattagca
    30241 ttgaaaatat actctgaaga agataaaact ttagaaattg atgtacgtga tgaaggcgaa
    30301 gtaacagcaa gcgacattac acatgatagt gatgttgaaa ttttaaaccc agagcttaaa
    30361 attgcaacag tatctaaagg tggtcactta aaaattcgtc tagttgctaa caagggtaga
    30421 ggttacgcat tagcagaaca aaataatact agtgatttac caattggtgt aatccctgtt
    30481 gattcattgt attcacctgt tgaacgtgtg aactatactg ttgaaaatac acgtgtaggt
    30541 caaagcagtg attttgataa attaacattg gatgtttgga ctaatggttc aatcacacca
    30601 caagaatcag tttcattagc agcaaaaata atgactgaac acttgaatat cttcgttggt
    30661 cttactgatg aagcgcaaaa cgctgaaatc atgattgaaa aagaagaaga tcaaaaagaa
    30721 aaagtattag aaatgtctat tgaagaatta gacttatctg tacgttcata taactgctta
    30781 aaacgcgcag gaatcaattc tgttcaagag ttagctgaca aatctgaagc tgacatgatg
    30841 aaagtgcgta atttaggtcg taaatcttta gaagaagtta aatacaaatt agaagattta
    30901 ggattaggat taagaaaaga agattgataa aggaggttaa ctcatgggtt acagaaaatt
    30961 aggtcgtact tctgatcaac gtaaagctat gttacgtgac ttagctacat cacttattat
    31021 tagtgaacgt attgaaacta cagaagctcg tgcaaaagaa gttcgcagtg ttgttgagaa
    31081 attaatcact ttaggtaaaa aaggagattt agcttctcgt cgtaatgcag ctaaaacttt
    31141 acgtaatgtt gaaatcttaa acgaagatga aactacacaa actgcacttc aaaaattatt
    31201 tggtgaaatc gcagagcgtt acacagaacg tcaaggtggt tacactcgta tccttaaaca
    31261 aggccctcgt cgcggtgacg gtgctgaatc agtaattatc gaattagtat aagaatttat
    31321 ataaatacac taactacctt tatataaagc aaatgagtgc aacgataatg tttgccacat
    31381 acaaatattg tctagctcag agtaccccat caactaaata aagatttaaa gcgtgaactc
    31441 aacaaactta tgatggggtg cgcgcttttt tattgaataa gatatcggac ttatgaacag
    31501 aaatgttttt aagtccgatt tctttatatc tacttttttg agtgcgaatc taaaaatatg
    31561 atcaagctag tttgatcaat ttcactagaa ctgaatgaag tgaaagtatt atccttgaat
    31621 caaacgcggc caacactagt aaatcattta ttttattaac gtttatacat aattgttaga
    31681 gaggaataaa tgtccttatc attagttgtt aaacaacact ttaaagacta gaaatgagtc
    31741 agaaaatact agtaatatat agcaaaccca gtaaatgtca tatacagcga tttataaata
    31801 ttgtaaaata tgatagatac acgaatcgta aaggagagag acaagtggag gataagaatt
    31861 cagttattgt atttaaaaat gtttcatttc aatatcaaag tgatgcatcc ttcacattga
    31921 aagatgtttc ttttaatata cctaaaggtc agtggacatc tattgttggt cataacggtt
    31981 ctgggaaatc tacaattgcc aagttaatga ttggcataga gaaagttaaa tctggagaaa
    32041 ttttttataa taatcaagct ataactgatg ataattttga aaagttaaga aaagacatag
    32101 gaattgtatt tcagaatccg gataatcaat ttgttggttc aattgtaaaa tacgatgtgg
    32161 catttggact cgaaaatcat gcggttccac atgacgaaat gcatagaaga gtcagcgaag
    32221 cgcttaaaca agttgatatg ttagaacgtg cagattatga acctaatgca ttatcggggg
    32281 gacagaagca gcgtgtggct atagcaagtg tattagcact taacccctct gtcattatat
    32341 tagatgaggc gacttctatg ttagatcctg atgcacgtca aaatttattg gatttagtga
    32401 gaaaagttaa atcagaacat aatattacaa tcatttctat tacgcatgat ttatctgagg
    32461 cgatggaagc agatcatgtt atcgttatga ataaagggac tgtctataaa gaaggcacag
    32521 cgactgaaat tttcgaccat gcagaagagt taacaacaat aggtctagat ttaccattcc
    32581 caatcaaaat aaatcaaatg ctgggacacc aaacatcatt cttaacttat gaagggctgg
    32641 tggatcaact atgactatac gctttgacaa tgtaagttat acctatcaaa aagggacacc
    32701 ataccagcat caagctattc atgatgttaa tacagaattt gaacaaggta aatattacgc
    32761 catcgttgga caaacgggta gtggtaaatc aacattgata caaaatatta atgcactgtt
    32821 aaagccaact actgggacag ttacagttga tgacattact attacacata agaccaaaga
    32881 taaatatatt agacctgtaa gaaaaagaat tggaatggta tttcaattcc ccgaatctca
    32941 attatttgag gacacagtag agcgtgaaat gatatttgga cctaaaaact ttaaaatgaa
    33001 tttagatgaa gccaaaaact atgcccatcg tctgttgatg gatttaggct tttcaagaga
    33061 tgtaatgtca caatcaccat ttcaaatgtc aggtgggcaa atgcgtaaaa tagcgattgt
    33121 atcgatattg gcaatgaatc ctgatattat cgtggttgat gaacctacag caggacttga
    33181 tccacaaagt aaacgacaag taatgcgatt actaaagtca ctacaaacag atgaaaataa
    33241 gacaattatc ctaatttcac atgatatgaa tgaagtcgcg cgttatgcag atgaagtcat
    33301 cgttatgaaa gaaggtagta tcgtgtcgca aacatcacca aaagagctct tcaaagataa
    33361 agaaaaattg gcggattggc atattggttt gccagaaatt gttcagttac aatatgactt
    33421 tgaacaaaaa catcaaacaa aattaaaaga tattgcctta actgaagaag catttgtaag
    33481 cttgtataag gagtggcaac atgaaaaata aattgattat agggcgatat ttaccaatta
    33541 attcttttgt tcatcatctt gatccaagag caaagttaat gtttgttttt ctttttatta
    33601 tattaatatt tttctgtcat tcaccattaa catacctttg ggtgtttgca cttatcttat
    33661 tctttatgag attagcaaaa attcaattat ggttcctaat caaaggttta acgccaatat
    33721 ttttcttttt aatcttcacc ttaatgatgc atatattttt aactaaaggt ggatatgtat
    33781 tagttgaatg gcatggcatc acgattgaaa ctaatggtat tttagaaggg atatatatat
    33841 cactgcgttt aattgggatt gtgatgattg caacaattat gacactatct acaagtccaa
    33901 ttgatttaac agatgcgttt gaaagattac ttgcgccact aaagatgttt aaattaccag
    33961 ttcatcaatt aagtatgata atgtccattg cgttacgatt catcccgacg ttaatggatg
    34021 agttagataa aatcattttg gcgcaaaagt cgcgtggttc tgaaataagt tcagggaaca
    34081 ttgcaacacg tattaaatca tttattccat tactagtgcc actattcatc tcagctttcc
    34141 aacgcgccga agaattagcg gtcgcaatgg aagttagggg ttatgatgcc aatgttaaga
    34201 gaacgagcta cagacagctt aaatggcaat tgagagatac gttatcttta atcatgatta
    34261 tcccaattgc aattatttta ttcgtattaa aatattcagg agtgtaaatt catgcgtata
    34321 ttagtagaaa ttgcgtatca aggaaataat tttctaggtt ttcaaattca acaaaatggt
    34381 cgaacggtac agcaacaatt tgaaaagcta ttacaacgca tgcataaaag acatgtgaga
    34441 atccatcctt caagtaggac tgatagaggt gtacatgcga tacagcaata ctttcatttc
    34501 gacacagagc tgaatatacc tatgtcacaa tggcaatatg caatgaaccg aacgttgcct
    34561 gatgatattt atgtcaacaa tgtagttaca gtcgatgacg attttcattg tcgttacgat
    34621 tgtgtcggta aacgctatcg atataaagta tatcaagcac aacaccgcga tccatttcaa
    34681 agtggtttga aaacatttat tcctgaaccg ttggatttag ataaaatgaa cagagcggca
    34741 caacaattca taggtacaca tgattttacg ggattttgtt cgcaaaaaac tgaagtagaa
    34801 agtaaggtta gaacattata ccaaagtgaa attgtaaaga cagatgatgg ctttgattat
    34861 attgtcactg gatctggatt tttatataac atggtgcgtg tcttagttgc atttttaata
    34921 gaagttggaa aagggcgaca tgaagtatct gatgtaccaa aacttcttga atcaaagaat
    34981 cgtaagaatg taccttttac tgcaccggct gaaggattat atttagagaa aatttattta
    35041 gatgaaaatg agttattaaa agactttggt aacgatatca aaatacatcg taaaaaatca
    35101 ttacaaaatg actgattgcc attgacaaaa agcttgtgaa attataagat tattaacggt
    35161 attgttttat atccacccca cgataagccc cggaaactta ttgtgttaca agatatataa
    35221 gcagaaacga acaacagtta acaaaataaa tgaaattaaa cgttttaaaa atgaaacaaa
    35281 tgaaatcatc tattaggtta tgaaactgtt tatagcttga atagaagcat ttatttttta
    35341 ggaggacaat tattatgcgt caaacattta tggcaaatga atcaaacatt gagcgcaaat
    35401 ggtatgttat cgatgctgaa ggccaaacat taggtcgttt atcatcagaa gtagcatcta
    35461 tcttacgcgg taaaaataaa gtaacttaca caccacacgt tgatactggt gattatgtaa
    35521 tcgttattaa tgcatcaaaa atcgaattta ctggtaacaa agaaactgac aaagtttact
    35581 accgtcactc aaatcaccca ggtggtatca aatcaatcac tgctggtgaa ttaagaagaa
    35641 ctaacccaga acgtttaatt gaaaactcaa ttaaaggtat gttaccaagc actcgtttag
    35701 gcgaaaaaca aggtaaaaaa ttatttgtat atggtggcgc tgaacatcca cacgctgcac
    35761 aacaaccaga aaactacgaa ttacgtggtt aattagaagg aggaaatgac tttggcacaa
    35821 gttgaatata gaggcacagg ccgtcgtaaa aactcagtag cacgtgtacg tttagtacca
    35881 ggtgaaggta acatcacagt taataaccgt gacgtacgcg aatacttacc attcgaatca
    35941 ttaattttag acttaaacca accatttgat gtaactgaaa ctaaaggtaa ctatgatgtt
    36001 ttagttaacg tacatggtgg tggtttcact ggacaagctc aagctatccg tcacggaatt
    36061 gctcgtgcat tattagaagc agatcctgaa tacagaggtt ctttaaaacg cgctggatta
    36121 cttactcgtg acccacgtat gaaagaacgt aaaaaaccag gtcttaaagc agctcgtcgt
    36181 tcacctcaat tctcaaaacg ttaagctgca gctgttgcga acttgttcgt ttacagatgg
    36241 agttcgcaaa ttgcgggagc aatttgtgtt caactgaaga aacgtttaca acactctttg
    36301 gattattcca aagagtgttt tttgtatttt tatagagtta tttagatacc atttagttac
    36361 ccctagagta actaatttgt ttcaattctg cttaaaattc aatgatatca aactttagga
    36421 aaccatatga aatgaccttg tttttctttg ggattcgtac gacaagcaga tagaggttgt
    36481 aatgatattc gatagatatc gtattgaatg ttataataaa gtcaataaga tgcgagattg
    36541 cgaggtttat atatgactag tagtaagtat attgaatatt tgcaaactga ggttgaagga
    36601 cagcttctag atcgaaagag ggcatctata aatcctaaag atgttgctca acacattagt
    36661 gcgtttgcaa atgctgaagg tggcaaactg gtaattggta ttgaagataa tggagaaatt
    36721 tcgggattta atcattcaaa agcaaaaaag aaagaggttt atattgaagc acctttcgaa
    36781 catttatata gaatacctaa atatacatat gaaataatag aagtgaagaa acgcgatgga
    36841 actatggatg aaattcttat tttcgacatt gaacccagtt atgatgccat aatcacctta
    36901 aaagatgatt cagtatattt aaggattaac gataaaagta gaaaactgac acacaatcaa
    36961 attacaaatc tagaatacga ccgtggttca cgaagattcg aagaagaatt agtagagtat
    37021 tctagtattg aagatgtgaa tgaagaacta gttgatgaat ttaagcaatt acttaataca
    37081 aacgtagata atgaaaaatt attaaaagct agaggattta tgcgtgaagg taaattgaca
    37141 gttgcaggtt tgttattgtt tagtaataac atcaatgttt atttaccagg cgctagaatt
    37201 cgatttatga ggtatgaagg tacaaaagaa gaatctggga caagacttaa cattgtaaaa
    37261 gatattactt ttgataaagc tttgccagta gcaataagag aagcgagagc ctttatcaat
    37321 acacaattac gtgaatatac ttttttaggt aaagagggaa gatttgtaac tttgccagaa
    37381 tatccagaat ttgcttggtt tgagggaatg ataaattcta ttgtacatcg cagatatgat
    37441 aatcaaggcg atcatataag aataaaaatg tttgacgaca gattagaaat tagtagcccg
    37501 ggtgcactgc ctgcttctgt tatgttagag aatattaaag aagaaagata ttcaaggaat
    37561 ccaaaattag ctgcagcatt aactcaatat aaatgggtga gagaatcaaa tgagggcgtg
    37621 ggacgtatat ttgacgaaat gaaggaatat tttttagatg atcctgtata ctcagagcct
    37681 aataatagtt cagtacaact agctttgaag aataacataa tagcaaggaa aaaaagagaa
    37741 acagggagag tgagtaatat aataacacct gaattatttg aaagtttaaa tgagcaacaa
    37801 gaattaattg tgagacattt atataatcaa ggcgaactaa cagcatctaa aattgctaat
    37861 attattcaaa ggtctgttcc tactgctaga aaaagattga aagaattaga ggaaatgaat
    37921 attatatcga cacatggatc aagtaagaat gatccaaaga gaacatatta tttactcgga
    37981 ttcgagtaaa gagaaaaatt ttcgagtaac tcaaaagaaa aatattaaaa aatcatggga
    38041 aaccaatgat atcaagggtt ttgtgagctt tcgagtaaag agggggattt tcgagtagta
    38101 ttatttaata agaattacaa gttaaataaa atacctacta atcagaagtt gacagagatt
    38161 gtagaatttc tatcagatgg taagttagca agtagacttg aaattcaaga aacaatatga
    38221 cttcgaaaaa atttatacat cttagttaat tgctgaacta aagaaattag aaattatcgg
    38281 atccgaaggt agaggtccag gtactagata ttatttattt agaggctaat aaatacatca
    38341 tgtgataacc ggacgataac ctattgatat acataaaaac attgataaat caatatattt
    38401 acgaccggac gataaccgga cgataaccgg acgataatcg gacgatacga gaagagtata
    38461 taccaccgga cagcagttta tttagttacc cctgagtgat atttgatgca attctatgca
    38521 atcgaaaaaa ttagaaaacc tataatatca tgccttaaga cagtatatgc aactatatga
    38581 aaccctaaag taaacaaggt cttaaagcag ctcgtcgttc acctcaattc tcaaaacgtt
    38641 aattgtcgga cgatatatac aaaacacctc gatgttatgt cgaggtgttt ttttgcgttt
    38701 gtgttgggaa tatgaaatgt atgtagtaca aatgaacttt ccctttattt attgtctcag
    38761 gaatagaata aattcaacta tgaattattg atttacacgt ataatttgta catgcttaca
    38821 caatcaaaag tgtacattat taaattgtca tttagcttgc ggaggacgga caataatgtt
    38881 ctaatcatag tggttcaagg gaaagggcta tcggatgaaa accggaagat aactcaaaaa
    38941 ccatcattta agagtgttat caaaataagg agtgacttaa ttgaaagatt ctatattttg
    39001 gaagaaagct tttattcctg tttattttat cgttgcgatg ttggcgtttc tactttttaa
    39061 gttttatatt aaaacagata acttttctat atacttaatg attattttct taatttgttt
    39121 aggaactgca tctatcattt ataactataa aaacaatcga taaatataag tatgaaatgt
    39181 ataagtcaca attagatcta agtcttgctg tggctttttt tatcgaaatg acaatttgaa
    39241 accgccataa aacagcattt tcagcccgcc ataaaacgac aatttcaaac cgtcattgac
    39301 taaagacctc atcccaaaat atgctaacaa tcctacacac caatcaaccc gacatccctc
    39361 ataatcacac tgcacaaaat ctactcatgc atttttggaa tacttagtat tacaaatagc
    39421 gatttttatt catcttacaa aggatatata atgtgctgaa ggcaattttt atgtattaca
    39481 aatctaatta tatatgtaaa gttttgataa atatcattaa ttttacataa ctatcattgg
    39541 attacaattc acaaatcaat tatatgtaat acacatcaca tttgaaggga aatgaatata
    39601 aatgactgat aaaaagtaca ctgcagccga tatggttatt gatactttga aaaataatgg
    39661 ggtagaatat gtttttggta ttccgggtgc aaagatagac tatctattta atgctttaat
    39721 tgatgatggt cctgaactta ttgtcacgcg tcatgaacaa aacgccgcaa tgatggcgca
    39781 aggtattgga agattaacag gcaaaccggg tgtagtactt gttacaagtg gccctggtgt
    39841 aagtaattta acgactggac tattaacagc tacatctgaa ggggatcctg tattagcgtt
    39901 aggtggccaa gtgaaacgta atgatttatt acgattaacg catcaaagta ttgataatgc
    39961 tgctttatta aaatattcat caaaatatag tgaagaagta caagatcctg aatcattatc
    40021 agaagttatg acaaatgcaa ttcgaattgc tacttcagga aaaaatggcg caagttttat
    40081 tagtattccg caagatgtga tttcttcacc agttgaatct aaggcgatat cactttgtca
    40141 aaaaccaaat ttaggtgtac caagtgaaca ggatattaat gatgtcattg aagtgattaa
    40201 aaatgcatca tttccggttt tactagctgg aatgagaagt tcaagtgcag acgaaacgaa
    40261 tgctattcgc aaattagtag agcgtaccaa tttacccgtt gtagaaacat tccaaggtgc
    40321 gggtgtgatt agtcgtgaat tagaaaatca tttctttgga cgagtgggtt tattccgtaa
    40381 tcaagttggt gatgaattat tacgtaaaag tgatttagtt gttacaatcg gttatgatcc
    40441 tatagaatat gaggctagta actggaataa agaattagat acgcaaataa tcaatattga
    40501 cgaagttcaa gctgaaatta ctaattatat gcaaccgaaa aaagagttga ttggtaatat
    40561 tgctaaaacg attgaaatga tttctgacaa agtagatgaa ccatttataa atcaacaaca
    40621 tttagatgaa ttagaacagt taagagcgca tattgatcaa gaaactggta ttaaagcgac
    40681 gcatgaagaa ggcatcttac acccagttga aattatagaa tctatgcaaa aggtattaac
    40741 tgatgaaaca acagtgacag ttgatgttgg tagtcactat atttggatgg cacgtaattt
    40801 cagaagttac aatccaagac atttattatt tagtaacggt atgcaaacgc ttggtgtagc
    40861 attaccgtgg gcaatttcag ctgcgcttgt acgccctaat acgcaagttg tatccgttgc
    40921 tggcgatgga ggctttttat tttcatcaca agatttagaa acggccgtac gtaaaaatct
    40981 aaacattatt caacttattt ggaacgatgg aaaatataac atggttgaat tccaagaaga
    41041 aatgaaatat aaacgttcat caggtgtcga cttcggtcct gtagatttcg taaaatatgc
    41101 tgaatcattt ggcgcaaaag gtttacgagt tactaatcaa gaagaattag aagcggcaat
    41161 taaagagggc tatgaaacag atggtccagt attaattgat atacctgtaa attacaaaga
    41221 taatatcaaa ctttcaacaa atatgttacc tgacgtattt aactaaaaca aagataaatg
    41281 ttaatgagga gtgggaaatt ttatggctag tgttttatat caacatggta cattaggcac
    41341 attaatggca ggtttattaa aaggaactgc atcaataaat gaattattgc aacatggtga
    41401 tttaggtatc gctacactaa caggttcaaa tggtgaggtc atctttttag atggaaaagc
    41461 ctatcatgca aatgaacata aagaatttgt ggaattaaaa ggtgatgagt taacaccata
    41521 tgcaactgta actaaattcg tagcagatac aagctatgaa acgaaagata aatcttctga
    41581 agcagttttt gcagaaatta aggaaaagat gttgagtgaa aatttatttt cggcagtaaa
    41641 aatttcaggc ttatttaaaa aaatgcatgt acgtatgatg ccggcacaag agccacctta
    41701 tacacgttta attgattcag ctagaagaca acctgaacaa actgaaacat acgtcaaagg
    41761 ttcagtcgtt gggttcttta caccagaact attccatggt atcggatcag caggattcca
    41821 tgtacacttt gcaaatgatg atcgtaactt tggcggacat gtcttagatt ttgaagtaga
    41881 agatgttaaa gtagaaatcc aaaatataga aacatttgaa cagcattttc caattcaaga
    41941 tgaagatttc ataaatgcaa atattgacta taaagatatt gcagacgaaa ttagagaagc
    42001 tgaataatga atgcggaaat gtaatgatgg attataaaaa ttgaagcatt gacttcataa
    42061 tgttcgattt ggaaatttag caatgataaa aggttgttta atacggttaa gcatgtttgt
    42121 catagagcat acgtctaagt aataaaataa atcccttcac tattaacggt agtgagggga
    42181 tttatttagg tttcagatat ttgagatttg ctgttatgtt agattataaa ttgcggaaga
    42241 cattcatatc gaatttacaa ttgtataggc caatctaatc tattgtcagt agaagcaatc
    42301 aataataaat tacaagttca atcatttgtt tcatactaaa aagacaaacg caatttttca
    42361 gcgtttgcct tgtataacta ttttcatttt caaattatta tttaactaca atttgtattt
    42421 gtttgattgt acttggatca attgaatttt tagcgtcgtc atttttcttt agattcacta
    42481 cttttttatt accatcattc aaagtaagtg tatacgttgc tgtttgtgca ttattaattt
    42541 tttctgttgt aacaccacgt tgagaagcta attcattttt tactttactg tcaatttctt
    42601 gataaagtac ctttttattt tctggaaaaa caaagtaagt tcgatgtaat gcagtaatac
    42661 catctactga aatcgtgtaa ggaacagtgt gataaccatc cattgtcatt tctttatagc
    42721 cgttattact atctgcagat gcttcgtgac taggtaatgc agctccgacc gttgataata
    42781 atcccaatgc taaagtggca gtaacaaatg attttagttt catatctcaa tctcctttta
    42841 aagttgtggt atattacact atttatataa cacgtttcat aaagtttaaa acatactttt
    42901 tgattttttt atatttttga attttagtaa tagtttttaa cgaggaatat gactcgtgta
    42961 ttttgaaaca ggaattataa taaaccataa tgttactata attttaaatc attaattatc
    43021 atctttattt aatgtttgtt gtaattcaaa gtaatacttt gaattgccgg tactaaaata
    43081 gttaaaccat gcatctaaag tagaatgttt aaatacatct agatgatgta gtatatcttt
    43141 tgtccacatt agtgcgccag ttgaacttgc agtaattaaa tttttatgag atacagatgg
    43201 ttgatcaata tataattttt gtccatggta atttgaagaa aaactttcta gatataataa
    43261 gtcattactc gtatgataat atgcatttaa tataccaata tcagctagcg aaattgttgc
    43321 tccgcatata gccgcaacat agccaccatt tgataaaact tctttagcaa tttttattac
    43381 aggtaaatgt tttgaatcat tccatgtgtc tgagccaggt agtattagaa aagtgtcttt
    43441 agaaatacta atttcctcaa ttaaacattc gggcttaata ttaatacctc ccattgtagt
    43501 aataggtgtt tttgagttac taaccatttc tatgtttatt gtttgagcat cttttttaaa
    43561 gaatcgctta gagtttaact cggctaaaat attacttatt tcccagtctg ctaaaccatc
    43621 tataatataa aaatatacat tcttcataat tatcctcctg tagtttaatt tgatatcatt
    43681 ataagaaatt aaagtgacca actgtatggc aacaattaaa agacaggtgg aatttgtatg
    43741 aaaattagtc ggttaattag tattattttg attttgaatg agagaaaacg tgtaagtgct
    43801 catgagttgt cagaattaat ggaagtatca caacgtacaa tttatcgaga tatagaagcg
    43861 ataaatatag ctggaatacc tgtttattct attccaggtg tcggtggtgg ctttgaaatt
    43921 atggaaaatt ttaaaataga taaaaataca tttactgaaa atgaattagc aagtctttta
    43981 attagtaact ctaattttcc ggaaaaacta aagaataatg atttttttaa tacaaatcta
    44041 aaaattaaaa gtttaatacc gaaagaaaag ttaaattcaa tagaaacaca agtagaacaa
    44101 tttcaattag attctaatca ttggaatgaa ttaagaaata tagatgaaca actgattaaa
    44161 tttaaaaacg ctatacaaaa caatcaggta ttaaaaatta aatatattaa tcatttagga
    44221 aataaaacag aaagagaagt cgaaccatat caacttattt taaaagcagg acattggtat
    44281 tgttatgttt attgttattt aagagatgat tttagattac ttaaattaaa tcgagttata
    44341 catttgcaag aattagaaag caaatttatt aaaaaaatgt atatagaccc attattatct
    44401 acaaatagaa tttttgaaaa attaaaaatg acaattacac ttcgcgtaca cgaatcaatt
    44461 gttgaacgtt tattagattt ctgtgattac gatagcttta ggcaacaaaa taatcgatat
    44521 tatgtagttg acttcccatt catcgacaac tcatattatt ttggattaat tttaagtttt
    44581 ggagataagt gtgaagtttt agaaccaact gaaattagaa ataaaatgaa acaaacaatt
    44641 aaaaaaatgg cggataatta taagtagtca gattacaata attaaatgag gagaaacttg
    44701 ctgaatgcct tggtaaatcg atttataaat aatcgagaac ttatcaaagg ggatgtggtc
    44761 tgtgggttac aaggtgaatg atagagatat ttataaaatc tcgacactat aaaaatggta
    44821 taatgtcgag attttcttgc ttatttagtt aattcaaagc gtacgccgga ttcatttgta
    44881 gtcgatgtat ttttgtttgt aatagagtat ccagtcattg aaattttaga tacaatatct
    44941 gaagcggtat ttgtagattc gggattatag aagctacatt cataagtgtt atcatctttc
    45001 tttttaagaa taaacattcc tttggcttta acttcgactt tagtgttgtt aatgtcaaaa
    45061 gtttgagtgc tattactata attgacacca gcccaaaccg attcattatc tttcacaacg
    45121 tggaagtcat catcttgttt aacgatagtt actaaatctt ttttggtatt aaagacattt
    45181 ttagatattc caggatacaa cacatatcca tatttatcgt ctttatcaga atgcttttga
    45241 gttacttcat aatactcatc agttttttgt gtatcctttt gacttttatt tatatcactc
    45301 cacttaccag tatgactttc tttttttaca gttattttcg gtttgtttaa aaaatgatag
    45361 cctatattgt ttttaggttt attgggtgac tctaaaaaga cggaattggt tccctgatta
    45421 tcggaagcgg ttgtttgttt atcgtctgta tataacgtat acccattcgc tttgcgattt
    45481 tcaatcgttg tcactggatt ctttgatgaa tcagtacttt taatgccagt tcctaagaag
    45541 aaaattttat cgtttaatat gaaatatgat tttttggcag ttaaagtttt gtcctgattt
    45601 tcaaaatcca ttccaatact agcatgttgg tcatcaaatt ttgttccgcc tacaaaagtt
    45661 ttatcggagt tcttattttc tttaggttct tcattatcta aagttgtagt acctgctaat
    45721 cgtttcatat cagctgttgc ccagaagtta tcacggtagt gtttgacatc gctattgtat
    45781 aaataagaca ttccagcacc agtatgccaa ccttttagat tttcattatt gatactttcg
    45841 taacgtgcta cgtttttcga cgtcatactt aaaccaaatg caaagtctaa gtctttgtta
    45901 tgataggtga cacgatccat gtcattatat attttaagtt gttgtgttaa accattagta
    45961 gaaatagtgc tatctgtcat taaagacttc attttatcta tgtctgaata tgaatttaaa
    46021 taatcggttt gtttataact tgaatctgac tctactgaag ttttgacaat ttttttatat
    46081 ttagcttttg ttgaatcatc catggcatca cttaatctca acaatgattt cattactgtt
    46141 gcagatgctg agtgactcgt ttcattttct cggctaatag ctctaccacg tgataagtcc
    46201 atcatttcac ttttataaat gagtggcata aatccttcat caatccacga ctttaatgtt
    46261 gtatcatttt gattactatc tttaaaaggt gttgctttta tcatcggcat catttgagaa
    46321 ataccctcta agagtacaac gccataagca ccagtgtatg ggacgtcttg atgatcaatg
    46381 taagagccgt ctttatagaa tccattacgt tctttaccag ttgcattact ttgaacgtaa
    46441 gtgaacactt tattaaatgc atctattgat tctttcatca tagttgtatc ttcttcgata
    46501 atactttcta aaagttttac tttagcaatg tctactaaat ttccgccttt agcttgttca
    46561 ggttttccta cagaagataa tattttctca ctatctggag cgaaagtttt gataggggca
    46621 gtgtattttt tcttttcttc atcagtaaaa tcttctttta agagtataag ggtatttgtt
    46681 aatgctctag gtgttccaat ttcataatcc caccaattta aagctttttt ctttgatgaa
    46741 tcagttattt taaaattctc acttaattct tttacttttt cagttggttc ttttccatag
    46801 gcatttttat gcagccactc aagggcatct ttcactttct tcttgttttc atctgttttt
    46861 aatttagtat ttttatgctt catcgcttct gcgattttct caatattacg ataggtacga
    46921 gtcatatccg cagactttgt atctaaatct tttgcactat cccacaagta tttcctatca
    46981 ttttcagttt tcatatcttc aagtaacttt tttgcctcat tctccgtagc atcaaacttc
    47041 ttcttcattg cgtcattctt ctcatcatac tgattataac cgtagttaac atctagccat
    47101 gtgttcctca acttttcata atctagcgtt tgaacattcg tatcagccac agcgatttga
    47161 tgtttatcaa tacttctgaa ttcaccacca ttcaaagtaa tcacaccggc cattaataac
    47221 gtaatggtgg ataatttttg ccatttcttc attctatatg tcattgacat gtctcctttt
    47281 tgtgttgcgc gtgcgcaatg aatattatga ttaaataatg attcaatttt tcaaaattcg
    47341 ttaacgtata caaatgactg tctactttca aacaatccac aaagaatgtt gatgcatata
    47401 aacaatcgat cacccaaatt ttccgcacca cccaaaaatt gcaacgaaaa taattttaaa
    47461 aaattaaata ctatcaatct tagtgattat atcattttaa atatttaagt tatacaattt
    47521 ttaaagtaat taaaaacgat gaaatgtaaa atgttaaaaa agagacaaat ttaaatttga
    47581 gtaataaaat aagaagtatt caaacgaaga tgacaatata taaagcaaca ttactttaga
    47641 cgaccaaaca taactgaaag gatagtcgca atgaaaacta aagaagtcgt agcgctcatg
    47701 aatatatctc aagacacttt aagatattat gaaaaggttg gtgtgattcc acctgttaat
    47761 cgagatgaaa atggatatag aatatataat gatagtgatt taaattggat ttatttagtg
    47821 aaaaatttgc gaaatgcagg cgtcagtatt gaatcgctta tcgaattttg tagattagcg
    47881 cagcttccta aaaatgaaaa tattcaagca cagcaaaagc aaattttaaa taagcaactc
    47941 gaagaattaa atgaaaactt aaagacaatt catgatgcga gagatttact acaatataaa
    48001 attgataatt atgataatca tattgctaaa atcaatgcta gtgataatca tgatgccaat
    48061 gttgaacgtc tttgggagag aaagtaaacc tatggcttgc tatagagttt gctccatggt
    48121 ttatagtgga cttacaagat aaaggaggtt cattttatga atcatattga aataagtaaa
    48181 gatgtaaaga taccagtatt aggtttcgga gtatttcaaa ttcctcaaga acaaacagca
    48241 gaagcggtta aagatgcaat taaagcgggt tatagacata ttgatacagc acaaagttat
    48301 ttaaatgaaa ctgaagtagg tcaaggtatt gaagcttcag gtattgatag aagtgaacta
    48361 ttcattacga ctaaagtatg gattgaaaat gttaactatg aagatactat caaatcaatc
    48421 gaacggtcat tacaacgatt aaatttggac tatcttgatt tagtgcttat tcaccaacct
    48481 tataatgatg tatatggctc atggcgtgca ttagaagagt taaaagaaac tggtaaaatt
    48541 aaagcaatcg gtgtatctaa cttcggcgtt gatcgaattg tagatttagg tattcataat
    48601 cgaattcaac cacaagtgaa ccaaatagaa attaatccat tccatcaaca agaagaacaa
    48661 gttgcagcac ttcaacaaga aaatgttgtg gtagaagctt gggcaccatt tgcagaaggt
    48721 aaaaatcaat tattccaaaa tcaattgttg caggccattg cagataaata taacaaatca
    48781 attgcacaag ttattttacg gtggttagta gaacgtgaca ttgttgtact cgcaaaatca
    48841 gtcaatccaa agcgtatggc tcaaaactta gatatatttg attttgaact tacagaagaa
    48901 gataaacaac aaattgcgac attagaagaa agtaatagcc aatttttctc acatgctgat
    48961 ccagagatga ttaaagcact tacaagcaga gaattagatg tttaattata ataaaacaaa
    49021 gtaaataatt tacattacgc taacctgaaa cttggatgtt aaagtcaatg tttcaggtta
    49081 ttttattact cttaaaaagt gaaaggagca agaaaataag ttattatata tttatgtatt
    49141 atgcaataac ttacctaaga taataattac agtattgata attttataaa atgaagtata
    49201 taatgaatgt agaataaatt gtatagggga taataacatg aaatataaac attttgccat
    49261 tattacttta attacaggca tcgtcatgct cacggctatg tacttagtac catttgaata
    49321 tcataaaata ccaatatttg caggaatggc aattattttt acagtctatt ttagtaataa
    49381 aaaatctatt gatgaaacaa atatctttag taagaaaaat cgcaataaaa gtaaacaata
    49441 aaatgagttg taagcataag atttacagtt aattttttac gaatgggcct ttagcgattg
    49501 aaaatgttat aaagcagcaa catcctattc aaacaaaaaa caattcatca aatgaaaatc
    49561 gctacaaaac caaggcattt tgcacgcaat aattaaaatt ttcctctcat tttaattccg
    49621 aaaaccaaat gtcgaattcc gaaaaccaaa caccgaattc caaaaacata acttcaaaat
    49681 aaaaagcatt tccctaccat tcgggaaatg ctttttacgt actgattact ctgtcattaa
    49741 tgattttaca acggaaacca tatcgtcatg tatgaccaaa gtagcgtcgt tatcataagg
    49801 tgttcgatct ttattgataa taattaaatt gtcgccttta aaatttgata ttaatcctgc
    49861 agcaggttgt acaacgagtg atgaacctag tacaacaagg gtgtcagcat gttcaatttt
    49921 atttaatgcc cgtatgatgg taggttgatc taacatttca ccgtataata cgatgtccgg
    49981 tcgaatggca ccaccacaat tatcacaatg tttcaaagtt ctatcaatga catctgactt
    50041 cgtataagat ttatgacatg cattacaata aaaacgatta aacgtgccat gtaattcatc
    50101 gacatgttga cttccagcgt ctgagtgcaa accatcgata ttttgcgtga tgacacctaa
    50161 agattgttga ttacgttcta attttgctat ccaatcatga acgatattgg gaatcgtatc
    50221 gacaaatagt aagcgcttat ggcagaaatt gataaaacct tcaggatcat cttctaaata
    50281 atcacggctt aacaagtatt ctggcgaaag cccatctttt gaaatttcat caaataagcc
    50341 acccattgaa cggaaatctg gaacaccact agcgacagat acaccagcac ctgtgaaaaa
    50401 tgtaatacga ttcgaactat ctataatatg ttttagtgtc tctaaatcat tttccaaatt
    50461 aaacacccca tcaaaataat gaatgattta taacgtcttt tgcttttatt atagtatatt
    50521 cattttacga ttatcaaagg cgcagtttaa acagttcttt ttaaaaatga attatacata
    50581 taatcgaaca gttaaattat attagttttt acgcaatttt tattatagaa taagcatgta
    50641 tattaaaatt gatgtctaaa cataaaaggt aatgcgcaat cgcctaaata aaggaggcaa
    50701 ttttacattg aataaacatg aacgtttgga cgaaattgct aaactagtga ataaaaaggg
    50761 cacgataaga acgaatgaaa tcgtcgaagg tttaaatgtg tctgatatga cagttcgaag
    50821 agatttaatt gaattggaaa ataaagggat tttaacgaag attcatggtg gtgcacgcag
    50881 taattcaaca tttcagtata aagaaatgtc gcataaagaa aaacataccc gtcaaattgc
    50941 agaaaaacga tttatagcta gaaaagctgc atcattaatt gaagatgggg atactttgtt
    51001 tttcggaccg ggaacaacag tggaactatt agcagaagaa gtcaatcatc atacgctcac
    51061 aattattacg aattgtttgc cggtgtataa aattttgttg gaaaaacaaa cagcacattt
    51121 tcgtgtctat ttaattggtg gtgaaatgcg ccatattaca gaagcgtttg taggtgaaat
    51181 ggcgaatgcc atgttagaaa aactaagatt tagcaagatg ttctttagta gtaacgcagt
    51241 aaataaaggt gctgtgatga catctacatt agatgaagcc tatacgcaac aattggcact
    51301 aagtaattca attgaaaaat acttgctaat tgatcatacg aaagttggca aagaagattt
    51361 tacatcattt tgtcagttaa acgaattaac tgcagtggtt atggattatg aagatgaaga
    51421 aaaagtagaa acgattaaaa catatattga agtagtcgac taaattaaaa atataactgc
    51481 attgttaaaa tatgtgtcta tatcctcata agtgaatgtg aatttgcatt catttatggg
    51541 ctatttttta tgcaaattta tgtaaacggg aacctcgaca aagttttact acaatttcag
    51601 acgaatacct aattaaaata acaccacaat ttgaatgttc acttattgtt tgaaaatatg
    51661 tcataaacaa acagattata aacatattat gttgatttat tgtttgttta tgtttataat
    51721 ttaaacgtaa tcaaattgaa agccttttct caagattttc ataacctaca aataaacatg
    51781 tcatatttta agaaaggtat ttcaaaatta aagtaaaaag gagtcttatt atggctatta
    51841 ttattggttc agatgaagct ggcaaacgat taaaagaagt catcaaatca tacttattag
    51901 acaataaata tgacgttgtt gacgtaacag aaggacagga agttgacttt gttgatgcaa
    51961 ctttggctgt agcaaaagat gttcaaagtc aagaaggtaa cttaggtatt gttatcgatg
    52021 catttggtgc aggtagcttt atggttgcta caaaaatcaa aggcatgatt gctgctgaag
    52081 tatcagatga acgctctgga tatatgacta gaggccataa caattcaaga atgatcacta
    52141 tgggatctga aattgttgga gacacattag cgaaaaatgt cgttaaaggt tttgttgaag
    52201 gtaaatacga tggtggtaga caccaaatcc gcgtagatat gcttaataaa atgtgctaag
    52261 gaggaaaaat tactatgaag attgcattag gatgcgacca tattgttaca gatacaaaaa
    52321 tgcgtgtatc tgaattttta aaatcaaaag gacatgaagt cattgacgta ggaacatacg
    52381 atttcacaag aacacattat ccaatttttg gtaaaaaagt tggagaacaa gttgttagcg
    52441 gtaatgcaga cttaggtgtt tgtatttgtg gaacaggtgt tggtattaac aatgctgtaa
    52501 ataaagtacc tggcgttcgt tcagcgctag tacgtgatat gacatcagcg ttatatgcta
    52561 aagaagaatt aaatgcgaac gttattggct ttggtggacg tattattggt gagttattaa
    52621 tgtgcgatat tattgatgca tttattaatg ctgaatataa accaactgaa gagaacaaaa
    52681 aattaatcgc taaaattaaa catttagaaa caagcaatgc agatcaagct gatccacatt
    52741 tctttgatga attcttagaa aaatgggaca gaggcgaata ccacgattaa gggacgacac
    52801 atatgatttt aactttaaca ttaaatccat ccgttgatat ttcataccca ttaacagcat
    52861 tgaaattaga tgatgttaat cgtgttcaag aagtaagtaa aacagctggt ggtaaaggtt
    52921 taaatgtaac aagagtactt gcgcaagtag gtgagccagt ccttgcgagt ggttttattg
    52981 gcggtgaatt aggtcaattt attgctaaaa aattagatca tgccggcatc aagcatgcat
    53041 tttataacat taagggtgaa acacgaaact gcattgcaat tttacatgaa ggacaacaaa
    53101 cagaaatttt agagcaggga ccggagattg ataatcaaga ggctgcagga tttattaaac
    53161 attttgagca attactagaa aaagttgaag cagttgctat ttcaggtagc ttaccaaaag
    53221 gattaaatca agattattat gcacaaatca ttgaacgatg ccaaaacaaa ggtgtgcctg
    53281 tgatattaga ctgctcgggt gcaactttgc aaacagtatt agaaaaccct tataagccaa
    53341 cagtcattaa accaaacatt tctgaactat atcagttgct taaccagcca cttgatgaaa
    53401 gtttagaaag tttgaaacag gcagtgtcac aacccttatt cgaagggatt gagtggatta
    53461 ttgtgtcttt aggtgcacaa ggtgcattcg ctaagcacaa tcatacattc tatagagtga
    53521 atattccgac aataagtgta ttaaatccgg ttggttcagg tgattctaca gttgcaggaa
    53581 ttacttcagc aattcttaat catgaaaacg accacgattt actaaaaaaa gccaatactt
    53641 taggcatgct gaatgcacaa gaagcacaaa caggttatgt caatttaaat aattatgatg
    53701 atttattcaa tcaaattgaa gttttagagg tgtaaaaaat gtcaaaatcg aatcaaaaaa
    53761 tcgcatcaat tgaacaatta agtaataacg aaggtatcat ttctgcatta gcatttgatc
    53821 aacgtggtgc tttaaagcgc atgatggcaa aacatcaaac tgaagagcca actgtagctc
    53881 aaattgaaca attaaaagta ttagttgcgg aagagttaac acaatatgca tcttcaattt
    53941 tattagatcc tgaatatggt ttaccagctt cagatgcacg taacaaagat tgtggattat
    54001 tacttgctta tgaaaaaact ggatatgacg taaacgctaa aggtcgttta cctgactgtt
    54061 tagtagagtg gtctgcaaaa cgtttaaaag aacaaggtgc aaatgctgtt aaattcttac
    54121 tttactatga tgttgatgat actgaagaaa ttaacattca aaagaaagca tacattgaaa
    54181 gaatcggttc agaatgtgtt gcagaagata ttccattctt tttagaagta ttaacatacg
    54241 atgacaacat tcctgataac ggtagtgttg aattcgcaaa agttaagcct agaaaggtta
    54301 acgaagcaat gaaattattc tcagaaccac gctttaatgt tgatgtattg aaagttgaag
    54361 taccagtaaa catgaaatat gtagaaggct ttgctgaagg tgaagtggtt tatacaaaag
    54421 aggaagcggc acaacacttt aaagatcaag atgcagcaac tcatttacca tacatttact
    54481 taagtgctgg tgtttctgcg gaattattcc aagaaacttt aaaatttgct cacgaagctg
    54541 gtgctaaatt caacggtgta ctttgtggcc gtgctacatg gtctggtgct gttcaagtat
    54601 acattgaaca aggtgaagat gctgctcgtg aatggttacg tacaactggt ttcaaaaata
    54661 ttgatgactt aaataaagta ttaaaagata ctgcgacatc ttggaaacaa agaaaataag
    54721 tataaaaggg gattaatgct atgaatagag aagaagtcca attattaggt tttgaaattg
    54781 ttgcatttgc aggggatgca cgttctaagt ttttagaagc attaacagca gctcaagctg
    54841 gagattttgc aaaagcagat gcattgattg aagaaggaaa caattgcatt gctgaagcgc
    54901 atagagcaca aacaagcttg ttagctaaag aggcgcaagg tgatgatatt gcatacagtg
    54961 tgacgatgat gcatggtcaa gaccatttaa tgacaacaat tttactgaaa gatttaatga
    55021 agcatttatt agaattttat aaaagagggt gatgacaatg atgcaaaaat tgatcgcaca
    55081 aattgaaaaa gggaagccat ttttcgagaa attatcacgt aacatatatt taagagccat
    55141 ccgtgatgga tttatttctg caatgcctgt catcttattc tcaagtatct ttctattaat
    55201 tgcatacgtg ccaaatatat ttggttttaa atgggataaa ggcatggaag ccattttaat
    55261 gaaaccatat aactatacga tggggcttgt agcattttta gtagcaggaa cgacagcgaa
    55321 atctttaaca gattcattta accgtaagct agaaagtaca aatcaaatta actttatttc
    55381 tacaatgcta gcagcgatgt gtggattttt gttcttagct tctgatccag ccaaagatgg
    55441 tggattctta agtgcattta tgggaactaa aggtttatta acagcatttt tatcagcatt
    55501 tgtaactgtt attgtttata acttctgtgt gaagcgcaat attacaatta aaatgccgaa
    55561 agaagtaccg ccgaatattt cacaagtatt taaggactta attccatttt cagcggtaat
    55621 catcattctt tatgcattag atttagtcat tcgcaacagc tttaaatcaa atgtagcgga
    55681 aggtatttta aaattattcg aaccattatt tacagcagca gatggatgga ttggtgtcac
    55741 aattatcttt ggtgcctttg cattattctg gtttgtagga attcatggtc catcaatagt
    55801 agaaccagca attgcagcca ttacatatgc gaatatcgaa gcgaacttca agttgcttca
    55861 agctggagaa cacgcagata aaattattac atcaggtaca caaatgttta tcgttacttt
    55921 tggaggtacg ggtgcaacat tggtcgtccc gttcatgttt atgtggatga cgaaatctaa
    55981 aagaaacaaa gcgattggac gtgcatcagt tgtaccaaca ttctttggtg taaacgaacc
    56041 aattttattt ggtgcaccac tagtattgaa tcctgtgttc tttattccat ttgtattagc
    56101 accaattgtt aacgtatgga ttttcaaact tttcgttgaa gtgttaggaa tgaatagttt
    56161 tagtgtgaat ttaccttgga caacaccagg tccattgggc attatcatgg gtacaggttt
    56221 tggtttatgg tcattcgtac tagctattac tttgattgtt gtagatatta ttatttacta
    56281 cccattccta aaagtttatg atagtgaaat tcttgatgaa gaagaaggac gtaaagaaag
    56341 taattcagat ttaaaagaaa aagttgcagc aaactttgat acgaaaaaag ctgattcaat
    56401 tttagcggca agtggtgtat cagacgatgc agctaaagct tcaaatatca cagaacaaac
    56461 aaatgtctta gtactttgtg ccggtggtgg tacaagtgga ttattggcca atgcacttaa
    56521 taaagcagct gaagaatatc atgtgccagt gaaagcggca gctggcggat atggcgcaca
    56581 tatggacatt atgaaagagt accaattaat cattttagcg ccacaagttg cgtctaacta
    56641 tgaagatatt aagcaagata cagatagatt aggtattaaa ttagcgaaga ctcaaggtgc
    56701 tgaatatatc aaattgacac gagatggcca agcagccctt gatttcgttc aacaacaatt
    56761 tgaaaattaa gaataggagt ttttcatatg actaaaacat tacctgaaga ttttattttt
    56821 ggtggagcaa cagcagcata tcaagcagaa ggtgcgacaa atacggatgg taaaggtcgc
    56881 gtagcatggg atacgtattt agaagaaaac tattggtaca ctgcagaacc agcgagtgat
    56941 ttttataaca gatatccagt ggatttagaa ttaagtgaaa aattcggtgt taatggtatc
    57001 cgtatttcaa ttgcatggtc tcgtatcttc ccaaatggat atggcgaagt taaccctaaa
    57061 ggtgttgagt attaccataa gttatttgca gagtgtcata aacgtcatgt tgaaccattt
    57121 gtaacattgc atcattttga tacaccagaa gtgttacaca aagatggcga ttttctaaat
    57181 cgtaaaacga ttgactactt tgtagattat gctgaatatt gttttaaaga attcccagaa
    57241 gtaaaatatt ggactacatt caatgaaatt ggaccaattg gtgatggcca atatttagta
    57301 ggtaaattcc ctccaggtat taaatatgat tttgaaaaag tattccaatc acatcacaat
    57361 atgatggtgg ctcatgctag agcagtaaaa ttatttaaag atggcggcta tcaaggagaa
    57421 attggtgttg tacacgcatt gccaacaaaa tatccgttcg atccatcaaa tcctgaagat
    57481 gttcgtgcag cagaattaga agatatcatc cataataaat tcatcttaga tgcaacatat
    57541 ttaggtaagt attctcgtga aacgatggaa ggtgtgcaac atatcttatc tgttaatggc
    57601 ggtaaattaa acattacaga taaagattat gccattttag atgcagccaa agatttaaac
    57661 gacttcttag gtatcaatta ctacatgagt gactggatga gaggttacga tggagaatct
    57721 gaaatcacgc ataatgcgac aggtgataaa ggcggttcta aataccaact taaaggtgtc
    57781 ggacaacgtg aatttgatgt cgacgtacct cgcacagact gggactggat gatctatcct
    57841 caaggtttat atgatcaaat catgcgtgtt gttaaagatt atcctaacta tcataagatt
    57901 tatatcactg aaaatggttt aggatataaa gatgaattta ttgaatctga aaaaacagtt
    57961 catgatgatg cacgtattga ttatgtaaga caacatttaa acgttattgc agatgctatt
    58021 aaagatggtg caaatgtaaa aggttacttt atttggtcat taatggatgt gttctcttgg
    58081 tcaaatggtt atgaaaaacg atatggttta ttctatgtcg attttgagac tcaagaacgc
    58141 tatcctaaga aaagtgctta ttggtacaaa gagttagccg aaacaaaaga aattaaataa
    58201 ttagagatat taaaaggcct atcagtcgag tgctggtagg tctttattta taaaaagaga
    58261 taaattaaac atgcatatac atatttatat attaatcaat gggtgacaca cgattgaaag
    58321 ttaaataagc aatcaattaa caaacgttaa cggataactt tccaaagtca tcttaaaagt
    58381 taatgatgta ttcaaaatca actaaaggac atttttaatc acatccttta tacttatata
    58441 aaagacatga atgggagtta aaagtgtgaa gaaaattttt gtaattatta cgacattgtt
    58501 agcggtcgct attattatag gctctattat tacggtggtg tttagtcaac gacaggcaca
    58561 aacatttaaa atacaacaac agcaatttgt taaaaagcca attccgacat tgtttttaca
    58621 tggatttggt ggtagtgcca actctgaaaa atttatggtg aagcaagcag aaaaaagagg
    58681 ggtaactaaa gatatcatca ctgcttacgt ttcaaaggat ggtgcagtga catttaaagg
    58741 gaaactaagt aaagatgcag tgaatcctat tgtgaaaatt gaacttgaaa ataacagaca
    58801 aggctatttg gataagaatg ctgcgtggtt taaaaatgta ctgactaagt tacaatctga
    58861 atacaatttc gataaattca actttgtcgg tcactcaatg gggaacttaa catttgcaca
    58921 atatatgatg acatatggta acgacaagtc actgccacag ttaaacaaac aagtgaatat
    58981 tgcagggaca tttaatggtg ttttaaatat gaatgaagat gtcaatgaaa tcacagttga
    59041 taaagatggt aaaccaagtc gaatgaatca accttatcag caattacgcg tgctaaaaga
    59101 tatttataaa ggtaaaggta tcgaagtgct aaatatttat ggagatttga aagatggtac
    59161 acattcagac ggcagagtgt ctaatagttc ttcgaaatca ttaaaatatt tactgggaaa
    59221 tagtccgaaa agttatcgag aatctaaata tgaaggtgag tctgcacagc atagtcagct
    59281 tcatgagaat gaaaatgttg ctaatgagtt gatcgacttc ttatggaaaa aataaagcaa
    59341 ttgctagttt ttctggggca aaaaagcttg taatattaga gcttttcaaa aattatctat
    59401 tgtttgagag tttccataaa atgtctaagt cgtaacattt ttaatttatg tttatagcaa
    59461 atataatgta cttgaagtta aatgaatcag tgcttaagtc aaaatataac aactaagaat
    59521 gtatttgcat acagacatca cgaagacaca attcaaactt aacgcttaag taacaaataa
    59581 gtaaaagttt caaataaaga aaggtgataa atgatgcaaa ataaacaaat tctttttaat
    59641 aaagtaccag aaggcatgcc tcaagaggat acattcaaaa ttgaagatat tgacacgcct
    59701 aaacttgaga gcgatggtgt acttgtacaa acgctgtata tttcagtgga tccatatatg
    59761 agaggacgta tgactaaggc agattcgtat gtacagcctt ttgaaattgg taaaccgatt
    59821 gttagccatg tcgttgcaaa agtaattgat tcgacactcg cagattataa aaaaggagat
    59881 gtcgttgtag gtatgttgcc ttggcgaatc attaatcatg tccaagcgga tcgaattact
    59941 aaagttccaa cgacagatgt accacttgat ttatatttaa gtgttttagg aatgccagga
    60001 caaacagcat atcatggtct gcttgatatt ggacaaccta aagacggtga tactgttgtg
    60061 gtttcagctg cttctggtgc tgtaggttca gttgtaggtc aaattgctaa gattaaaggt
    60121 tgccgtgttg taggtattgc gggtggcgac aaaaaagtaa attatttaac agagacactg
    60181 ggctttgacg ctggtattga ttataagaaa gaggattttg cagaagcgtt agcacaagca
    60241 gtaccagatg gtattgatgt ttattttgaa aatgttggtg gtacagttgg cgatgaagta
    60301 tttaagcatt taaatcgttt tgcacgtgta ccagtatgtg gcgcaatttc gtcatataat
    60361 catcctgaag cagatatcgg accacgtatt caaggtacgc ttattaagaa gcaagtaatg
    60421 atgagaggct tcttagtaag tgaattcgct aatgatttta aagaagctag tgaacagctt
    60481 gcaacatggg ttcaagaagg taaaattcag tcacaagtaa ccattgaaga tggttttgaa
    60541 aatgcgccac gtgcatttaa aaatttattt actggcgata actttggtaa acaagttatt
    60601 aaagtatcgg aataataaag tatacgtttt aacaaaccaa ctttgttaat tgaccaaaat
    60661 ttaataactt tcttatctaa agcaaatttg ttcagtaaca tggtataaat aagtctaaaa
    60721 tgtaatacga aagtcgtctg taattattta tatattcaaa tgaaaaagga gtcatgatgc
    60781 tgcgatacaa gcacacatgg cttctatttt gtataataag aaataagttc ataaatgagg
    60841 tgaaacgata tgaaaatgat aggatttgaa aagcccttta aattggaaga aggaaattta
    60901 tttaaagtat acgaacaaag aaagccaacg ccagaaaacg atgatatctt agtcaaagta
    60961 aatagcatta gtgtaaatcc tgtagataca aaacaacgac aaatggaagt cactcaagca
    61021 cctcgtgtac ttgggtttga tgctattggt actgttgaag ctatcggacc agacgttaca
    61081 ttatttagtc cgggtgacgt tgtattttat gctggatcgc cagatagaca aggatcaaat
    61141 gcgacatatc aattggtgtc agaagctata gttgcaaaag cgccacacaa cataagtgct
    61201 aatgaagcgg ttagtctacc gctaactggt attacggcat atgaaacgtt ttttgataca
    61261 tttaaaattt cacataatcc ttctgaaaat ataggtaaat ccgtgttaat cgttaatggc
    61321 gctgggggtg taggaagtat tgccactcaa attgctaaac ggtatggttt aactgtcatt
    61381 acaacagcat cacgacaaga aacaacagag tggtgtgaaa aaatgggcgc agatatcgta
    61441 ttgaatcata aagaggattt agtgcgtcaa tttaaagaaa aagaaattcc attagtagat
    61501 tatatatttt gcacctataa tacagacttg tattacaata ctatgattga actgataaaa
    61561 ccattagggc atattacaac tatcgtagct tttaatgaag atcaagattt aaatgcatta
    61621 aaattaaaaa gtataacatt tacacatgaa tttatgtttg cgcgtccaat tcatcgaacg
    61681 cctgatatga ttaaacaaca tgagtattta gaagatatta cgaaaaatat agaatcagga
    61741 cattaccaac caacaacgac acaagttttt gaaggtttaa cgcctgaaaa cttatatcaa
    61801 gcacatcaat tgttggaaaa acagtcaatg attgggaaat tagtaattaa tatatagttt
    61861 agtaagtaaa gtcgccttat gcagaaaata ctgtataggg cgacttattt ttgtgtttag
    61921 cgactattga ttctaaacgg aaatatggca actttgcagg tatcaattca ataatgcatt
    61981 agaaaggcat tacttaaaca caataaaata ctttgttgtt cattgataaa taatttgagt
    62041 gtgttttata tatcattttt aaaagatgaa gcattattaa ttgtgtctat ataaaattac
    62101 aaatgattaa aatgttacag ttgtgggtat gaacttacca ttacacagaa agggtttgta
    62161 tttatgaaaa ataaatcagt aagtctagtg ttttgggtat cgttagtgat ttgtacgata
    62221 tttgttgctt ttggtgccat atttccgaaa cagttagaaa aactcacgca aaacattact
    62281 acatttattg cgctacattt ttcttggtat tatttattgc tcgttttagt tattttattt
    62341 gtctgtgtgt atattttatt ttcaagatac gcaaacatta cattaggtga agaaggtgaa
    62401 gacccagaat tttcattgcc atcatggttt gccatgttat ttagtgctgg tatgggaata
    62461 ggacttgtgt tctggacaac ggcagaacca atcagtcatg ccttcaaatt aacgcctatt
    62521 cataaagctg gcacgcaatc tgcaattaat gatgcaatgc agttttcatt tttccattgg
    62581 ggtattcatg catgggcagt ctatggtatt gtcgcgcttg tgtttgcata ttttagcttt
    62641 cataaaggat atcctggctt agtcagcgct acattgacgc ctttattagg tgaaaaagca
    62701 atgcgtggcc ctttaggtgg tgccattgat gtattggcag tcatagctac agtaacaggc
    62761 gttgctgcaa cattaggttt cggtgcattg caaataaacg aaggtttaca ttttttattt
    62821 aatgtaccga gtaacttcac gatgcaagta atcttgattg tcactgcaac catattattt
    62881 acttggtcag catggtcagg tatcgataaa ggtatcaaaa cgttgagtaa tatcaacatg
    62941 ttacttgctt ttgtagtact tattggtctt tttattgttg ggccaacgct ttacatttta
    63001 aatacattta cgaatggtct aggtaattat attgcaaatt tctttagtat gagtttacgc
    63061 attccgtctg gtggtcaaaa attccaatgg ttacaaaatt ggacaatctt ttactgggca
    63121 tggtggatat cttgggcacc atttgtaggt atatttattg cacgtgtgtc aaaaggacgt
    63181 acgattaaag aatttattct aggtgtactt tttgtcccgg cgttagtttg ctttatattc
    63241 tttgcggtat tcggcgcgtc agcaatttac ttacaagata atcatattgc cgatattgct
    63301 aaagctgcga cagaaacggc aacttttgca acgctacaac attatccgct aggttttgta
    63361 ttaagcttaa ttactttact tgttattatg attttctttg ttacatcagc ggattcggca
    63421 acttatgttt taggtatgtt gagttcaagt ggtgatatta atccgaagtc atttgtcaaa
    63481 gtgagttggg gtatcattat ggcattattt gcaatcatca tgatttacac aggtggtact
    63541 caagcgattc aaaatttatt aatcattgct gcgttaccat tttccgtggt cattatagcg
    63601 atgatatggt cgcttttaaa atctttgagt gaggagaaac cgagaaatag taataaggtt
    63661 ttaattaaac atcgtgaccc agatatttta gaatatcgtt cttcaaaaca tattgacgaa
    63721 aattaattaa aaattaggtt tcattaattt gaactaggga atat
//
LOCUS       DALMNS010000003        55210 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.003, whole genome shotgun sequence.
ACCESSION   DALMNS010000003 DALMNS010000000
VERSION     DALMNS010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 55210)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 55210)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..55210
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.003"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            64..1035
                     /locus_tag="O6Y56_000155"
     CDS             64..1035
                     /locus_tag="O6Y56_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000751707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573458.1"
                     /translation="MKKTLGCLLLIMLLVVAGCSFGGNHKLSSKKSEESKQETVKKES
                     EEEKDPEVAHYKKNKEKISKVKAVPVLEKIEPFITEKTFMNSTGMQGWKDYKSLMNQV
                     KLADYNFTKESKGASMEDVDKFFKNKKGVKRKEVTTYDGLKQVNYWYVDKSGKKIGGS
                     DTPVFYAEILTKYKDGKLIYASVEPGSYSYSNKNAVNLDKVEELDDLSMFSNLKDPKP
                     VPYSVAQMEISSVPVTSVSFVTKGGNHKDTNPEKEQVDMPQLAYLTVSPQLYHDKEHP
                     DPHIIGLVALPYLNASRDFGNAHYSVLNNLSKEMKEKLASRSLDLDK"
     gene            complement(1173..1376)
                     /locus_tag="O6Y56_000156"
     CDS             complement(1173..1376)
                     /locus_tag="O6Y56_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HDB5573459.1"
                     /translation="MQVNKVIYILLALFLGSFGIHKFYAGKNMQGILHLIFCWTGIPH
                     ILAIISAVITVFKPADEQGNVTL"
     gene            1675..2163
                     /locus_tag="O6Y56_000157"
     CDS             1675..2163
                     /locus_tag="O6Y56_000157"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDB5573460.1"
                     /translation="MAIKKLVPASHPILTKKAQAVIKFDDSLKRLLQDLEDTMYAQEA
                     AGLCAPQINQSLKVAIIDMEMEGLLQLVNPKIISQSNETITDLEGSITLPNVYGEVTR
                     SKMIVVESYDVNGNKVELTAHEDVARMILHIIDQMNGIPFTERADRILTDKEVEAYFI
                     ND"
     gene            2156..3091
                     /locus_tag="O6Y56_000158"
     CDS             2156..3091
                     /locus_tag="O6Y56_000158"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDB5573461.1"
                     /translation="MTKIIFMGTPDFSTTVLEMLIAEHDVIAVVTQPDRPVGRKRVMT
                     PPPVKKVAMKHDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLG
                     AINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDN
                     VGTMHDKLSVLGADLLKETLPSIIVGTNESVPQDDTQATFASNIRREDERISWNKPGR
                     QVFNQIRGLSPWPVAYTTMDDTNLKIYDAELVETNKINEPGTIIETTKKAIIVATNDN
                     EAVAIKDMQLAGKKRMLAANYLSGAQNTLVGKKLI"
     gene            3088..4395
                     /gene="rsmB"
                     /locus_tag="O6Y56_000159"
     CDS             3088..4395
                     /gene="rsmB"
                     /locus_tag="O6Y56_000159"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HDB5573462.1"
                     /translation="MIENVRSLAFDTIQDILNEGAYSNLRINEVLSENELNVMDKALF
                     TEIVYGTVKRKYTLDFYLKPFVKTKIKAWVRQLLWMSIYQYVYLDKVPNHAIINEAVE
                     IAKERGGYHNGNVVNGILRTMMRSDLPDFNEIADPKKRMAIEYSMPKWIIDHWATHFG
                     LEETETILQSFLETTSTTVRANLTRASLDDIIEKLQDEGYNVEKDHDLPYCLHIGGQP
                     IIHSRSFKDGFVSIQDKSSMFVAHIMNVDRHDHVLDACSAPGGKACHIAEVLMPEGQV
                     DASDIHDHKIDLINFNIKKLRLTNIKAFQHDATKPYDKTYDKILVDAPCSGLGVMRHK
                     PEIKYTQSKQHIESLVDLQLEILENVKNNVKIGGEIIYSTCTIEQLENENVIYTFLKN
                     NKNFEFEPFQHPITGELVKTLQIMPQDFNSDGFFITKIKRKDN"
     gene            4398..5492
                     /gene="rlmN"
                     /locus_tag="O6Y56_000160"
     CDS             4398..5492
                     /gene="rlmN"
                     /locus_tag="O6Y56_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002435140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HDB5573463.1"
                     /translation="MITAEKKKKNKFLPNFDKQSIYSLRFDEMQNWLVEQGQQKFRAK
                     QIFEWLYQKRVDSIDEMTNLSKGLRQLLKDNFTVTTLTTVVKQESKDGTIKFLFELQD
                     GYTIETVLMRHDYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKA
                     LDATEERVSQIVIMGIGEPFENYDEMMDFLRIVNDDNSLNIGARHITVSTSGIIPRIY
                     DFADEDIQINFAVSLHAAKDEVRSRLMPINRAYNVEKLIEAIQYYQEKTNRRVTFEYG
                     LFGGVNDQLEHARELAHLIKGLNCHVNLIPVNHVPERNYVKTAKNDIFKFEKELKRLG
                     INATIRREQGSDIDAACGQLRAKERQVETR"
     gene            5499..6242
                     /locus_tag="O6Y56_000161"
     CDS             5499..6242
                     /locus_tag="O6Y56_000161"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase Stp1"
                     /protein_id="HDB5573464.1"
                     /translation="MLEAQFFTDTGQHRDKNEDAGGIFYNQTNQQLLVLCDGMGGHKA
                     GEVASKFVTDELKSRFEAENLIEEHQAENWLRNNIKDINFQLYHYAQENAEYKGMGTT
                     CVCALVFEKSVVIANVGDSRAYVINSRQIEQITSDHSFVNHLVLTGQITPEEAFTHPQ
                     RNIITKVMGTDKRVSPDLFIKRLNFYDYLLLNSDGLTDYVKDNEIKRLLVKEGTIEGH
                     GDQLMQLALDNHSKDNVTFILAAIEGDKV"
     gene            6239..8233
                     /gene="pknB"
                     /locus_tag="O6Y56_000162"
     CDS             6239..8233
                     /gene="pknB"
                     /locus_tag="O6Y56_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase Stk1"
                     /protein_id="HDB5573465.1"
                     /translation="MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIP
                     PREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH
                     GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE
                     TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA
                     IKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA
                     NEDVYELDKMKTIAVPLKKEDLAKHISEHKSNQPKRETTQVPIVNGPAHHQQFQKPEG
                     MLYEPKPKKKSTRKIVLLSLIFSLLMIALVSFVAMAMFGNKYEETPDVIGKSVKEAEQ
                     IFNKNNLKLGKISRSYSDKYPENEIIKTTPNTGERVERGDSVDVVISKGPEKVKMPNV
                     IGLPKEEALQKLKSLGLKDVTIEKVYNNQAPKGYIANQSVTANTEIAIHDSNIKLYES
                     LGIKQVYVEDFEHKSFSKAKKALEEKGFKVESKEEYSDDIDEGDVISQSPKGKSVDEG
                     STISFVVSKGKKSDSSDVKTTTESVDVPYTGKNDKSQKVKVYIKDKDNDGSTEKGSFD
                     ITSDQRIDIPLRIEKGKTASYIVKVDGKTVAEKEVSYDDI"
     gene            8461..9336
                     /gene="rsgA"
                     /locus_tag="O6Y56_000163"
     CDS             8461..9336
                     /gene="rsgA"
                     /locus_tag="O6Y56_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499727.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HDB5573466.1"
                     /translation="MKTGRIVKSISGVYQVDVNGERFNTKPRGLFRKKKFSPVVGDIV
                     EFDVQNINEGYIHQVYERKNELKRPPVSNIDTLVIVMSAVEPNFSTQLLDRFLVIAHS
                     YQLNARILVTKKDKTPIEKQLEINELLKIYENIGYETEFIGNDDDRKKIVEAWPAGLI
                     VLSGQSGVGKSTFLNHYRPELNLETNDISKSLNRGKHTTRHVELFERQNGYIADTPGF
                     SALDFDHIDKDEIKDYFLELNRYGETCKFRNCNHIKEPNCNVKHQLEIGNIAQFRYDH
                     YLQLFNEISNRKVRY"
     gene            9337..9981
                     /locus_tag="O6Y56_000164"
     CDS             9337..9981
                     /locus_tag="O6Y56_000164"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDB5573467.1"
                     /translation="MTKLYPSLLSVDFLVLQHELKRLEEAGVDGVHFDVMDGQFVPNI
                     SIGLPILDAVRKGTTLPIDVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQM
                     IKHLDKKAGVVINPGTPISQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNA
                     IKMERQLNFDIEVDGGVNTDTAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG"
     gene            9988..10629
                     /locus_tag="O6Y56_000165"
     CDS             9988..10629
                     /locus_tag="O6Y56_000165"
                     /EC_number="2.7.6.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine diphosphokinase"
                     /protein_id="HDB5573468.1"
                     /translation="MHINLLCSDRHLPQDIWAKSNEGKWGGVDRGALILLKHQIIPFF
                     SVGDFDSVSKEERQLLTEQLQIKPVQAEKADTDLALAVDKAVALGFDSITIYGATGGR
                     LDHFFGAIQLLLKKAYYKHDVHIEVIDQQNKIELLPKGQHTVEKDKSYPYISFIPMTD
                     DVELSLAGFKYNLARQMLNIGSTLTISNEIESLQAKVTVHDGLILQIRSTDLN"
     gene            complement(11011..11199)
                     /locus_tag="O6Y56_000166"
     CDS             complement(11011..11199)
                     /locus_tag="O6Y56_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDB5573469.1"
                     /translation="MGKQCFVTGRKASTGNRRSHALNSTKRRWNANLQKVRILVDGKP
                     KKVWVSARALKSGKVTRV"
     gene            11642..12016
                     /locus_tag="O6Y56_000167"
     CDS             11642..12016
                     /locus_tag="O6Y56_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HDB5573470.1"
                     /translation="MTLEISNDYGKIDISNEVIASVVGGKAVECYGIVGMASRQQVRD
                     GIAEILGHENYAKGIKVTENNGVVDIDMYIIVSYGVKISEVANNVQSTVKYTLEKSLN
                     VSVNSINIYVQGVRVNNTGKKA"
     gene            12031..13677
                     /gene="fakA"
                     /locus_tag="O6Y56_000168"
     CDS             12031..13677
                     /gene="fakA"
                     /locus_tag="O6Y56_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid kinase catalytic subunit FakA"
                     /protein_id="HDB5573471.1"
                     /translation="MISKINGKLFADMIIQGAQNLSNNADLVDSLNVYPVPDGDTGTN
                     MNLTMTSGREEVENNLSKNIGELGKTFSKGLLMGARGNSGVILSQLFRGFCKNIESES
                     EINSKLLAESFQAGVETAYKAVMKPVEGTILTVAKDAAQAAVEKANNTEDCIELMEYI
                     IVKANESLENTPNLLAVLKEVGVVDSGGKGLLCVYEGFLKALKGEKVEAKVAKLDKDE
                     FVHDEHDFHGVINTEDIIYGYCTEMMVRFGKNKKAFDEQEFRQDMSQFGDSLLVINDE
                     EIVKVHVHTEYPGKVFNYGQQYGELIKLKVENMREQHREVIRKEQHTAKPKMETVETA
                     IITISMGEGISEIFKSMGATHIISGGQTMNPSTEDIVKVIEQSKCKRAIILPNNKNIL
                     MASEQAASIVDAEAVVIPTKSIPQGISALFQYDVDATLEENKAQMADSVNNVKSGSLT
                     YAVRDTKIDGVEIKKDAFMGLIEDKIVSSQSDQLTTVTELLIEMLAEDSEILTVIIGQ
                     DAEQAVTDNMINWIEEQYPDVEVEVHEGGQPIYQYFFSVE"
     gene            13867..15927
                     /gene="recG"
                     /locus_tag="O6Y56_000169"
     CDS             13867..15927
                     /gene="recG"
                     /locus_tag="O6Y56_000169"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDB5573472.1"
                     /translation="MAKVNLIESPYSLLQLKGIGPKKIEVLQQLNIHTVEDLVLYLPT
                     RYEDNTVIDLNQAEDQSNVTIEGQVYTAPVVAFFGRNKSKLTVHLMVNNIAVKCIFFN
                     QPYLKKKIELNQTITVKGKWNRVKQEITGNRVFFNSQGTQNQENADVQLEPVYRIKEG
                     IKQKQIRDQIRQALNDVTIHEWLTDELREKYKLETLDFTLNTLHHPKSKEDLLRARRT
                     YAFTELFLFELRMQWLNRLEKSSDEAIEIDYDLDQVKSFIDCLPFELTEAQKSSVNEI
                     FRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHAESLM
                     ALFGDSMNVALLTGSVKGKKRKILLEQLENGTIDCLIGTHALIQDDVIFHNVGLVITD
                     EQHRFGVNQRQLLREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPII
                     TTWAKHEQYDNVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGV
                     SRVGLLHGKLSADEKDEVMQKFSNHEIDVLVSTTVVEVGVNVPNATFMMIYDADRFGL
                     STLHQLRGRVGRSDQQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGD
                     FFGVKQSGLPDFLVANLVEDYRMLEVARDEAAELIQSGVFFENTYQHLRHFVEENLLH
                     RSFD"
     gene            16129..16701
                     /gene="fapR"
                     /locus_tag="O6Y56_000170"
     CDS             16129..16701
                     /gene="fapR"
                     /locus_tag="O6Y56_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription factor FapR"
                     /protein_id="HDB5573473.1"
                     /translation="MRGETLKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIR
                     LDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSV
                     FHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQT
                     AKHYYVEVKSYVKHTLVFKGNFKMFYDKRG"
     gene            16706..17692
                     /gene="plsX"
                     /locus_tag="O6Y56_000171"
     CDS             16706..17692
                     /gene="plsX"
                     /locus_tag="O6Y56_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDB5573474.1"
                     /translation="MVKLAIDMMGGDNAPDIVLEAVQKAVEDFKDLEIILFGDEKKYK
                     LNHERIEFRHCSEKIEMEDEPVRAIKRKKDSSMVKMAEAVKSGEADGCVSAGNTGALM
                     SAGLFIVGRIKGVARPALVVTLPTIDGKGFVFLDVGANADAKPEHLLQYAQLGDIYAQ
                     KIRGIDNPKISLLNIGTEPAKGNSLTKKSYELLNQDHSLNFVGNIEAKTLMDGDTDVV
                     VTDGYTGNMVLKNLEGTAKSIGKMLKDTIMSSTKNKLAGAILKKDLAEFAKKMDYSEY
                     GGSVLLGLEGTVVKAHGSSNAKAFYSAIRQAKIAGEQNIVQTMKETVGESNE"
     gene            17685..18611
                     /gene="fabD"
                     /locus_tag="O6Y56_000172"
     CDS             17685..18611
                     /gene="fabD"
                     /locus_tag="O6Y56_000172"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDB5573475.1"
                     /translation="MNKIAIIFPGQGAQKVGMAQDLYNNNDQATEILTSAANTLDFDI
                     LETMFTDEDGKLGETENTQPALLTHSSALLAALKNLNPDFTMGHSLGEYSSLVAADVL
                     SFEDAVKIVRKRGQLMAQAFPTGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANIN
                     CLGQIVVSGHKALIDELVEKGKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFE
                     WRDAKFPVVQNVNAQGETDKEVIKSNMVKQLYSPVQFINSTEWLIDQGVDHFIEIGPG
                     KVLSGLIKKINRDVKLTSIQTLEDVKGWNEND"
     gene            18604..19338
                     /gene="fabG"
                     /locus_tag="O6Y56_000173"
     CDS             18604..19338
                     /gene="fabG"
                     /locus_tag="O6Y56_000173"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HDB5573476.1"
                     /translation="MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVV
                     EEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQ
                     EWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI
                     GLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIAN
                     TVAFLASDKAKYITGQTIHVNGGMYM"
     gene            19644..19877
                     /locus_tag="O6Y56_000174"
     CDS             19644..19877
                     /locus_tag="O6Y56_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002510960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDB5573477.1"
                     /translation="MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVM
                     ELEDEFGTEIPDEEAEKINTVGDAVKFINSLEK"
     gene            19993..20724
                     /locus_tag="O6Y56_000175"
     CDS             19993..20724
                     /locus_tag="O6Y56_000175"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDB5573478.1"
                     /translation="MSKQKKSEIVNRFRKRFDTKMTELGFTYQNIDLYQQAFSHSSFI
                     NDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKHPNLPEGNLTKMRATIVCEPSLVIF
                     ANKIGLNEMILLGKGEEKTGGRTRPSLISDAFEAFIGALYLDQGLDIVWKFAEKVIFP
                     HVEQNELLGVVDFKTQFQEYVHQQNKGDVTYNLIKEEGPAHHRLFTSEVILQGEAIAE
                     GKGKTKKESEQRAAESAYKQLKQIK"
     gene            20871..24437
                     /gene="smc"
                     /locus_tag="O6Y56_000176"
     CDS             20871..24437
                     /gene="smc"
                     /locus_tag="O6Y56_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HDB5573479.1"
                     /translation="MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDA
                     IKWVLGEQSAKSLRGSKMEDIIFSGAEHRKAQNYAEVQLRLDNHSKKLSVDENEVIVT
                     RRLYRSGESEYYINNDRARLKDIADLFLDSGLGKEAYSIISQGRVDEILNAKPIDRRQ
                     IIEESAGVLKYKKRKAESLNKLDQTEDNLTRVEDILYDLEGRVEPLKEEAAIAKEYKT
                     LSHQMKHSDIVVTVHDIDQYTNDNRQLDQRLNDLQGQQANKEADKQRLSQQIQQYKGK
                     RHQLDNDVESLNYQLVKATEAFEKYTGQLNVLEERKKNQSETNARYEEEQENLIELLE
                     NISNEISEAQDTYKSLKSKQKELNAVIRELEEQLYVSDEAHDEKLEEIKNEYYTLMSE
                     QSDVNNDIRFLKHTIEENEAKKSRLDSRLVEVFEQLKDIQGQIKTTKKEYQQTNKELS
                     AVDKEIKNIEKDLTDTKKAQNEYEEKLYQAYRYTEKMKTRIDSLATQEEEYTYFFNGV
                     KHILKAKNKELKGIHGAVAEIIDVPSKLTQAIETALGASLQHVIVDSEKDGRQAIQFL
                     KERNLGRATFLPLNVIKSRVVATDIKSIAKEANGFISIASEAVKVAPEYQNIIGNLLG
                     NTIIVDHLKHANELARAIKYRTRIVTLEGDIVNPGGSMTGGGARKSKSILSQKDELTT
                     MRHQLEDYLRQTESFEQQFKELKIKSDQLSELYFEKSQKHNTLKEQVHHFEMELDRLT
                     TQETQIKNDHEEFEFEKNDGYTSDKSRQTLSEKETHLESIKSSLKRLEDEIERYTKLS
                     KEGKESVTKTQQTLHQKQSDLAVVKERIKTQQQTIDRLNNQSQQTKHQLNDVKEKIAF
                     FNSDEVMGEQAFQNIKDQINGQQETRTRLSDELDKLKQQRIELNEQIDAQEATLQVCH
                     QDILAIENHYQDIKAEQSKLDVLIHHAIDHLNDEYQLTVERAKSEYTSDESIDALRKK
                     VKLMKMSIDELGPVNLNAIEQFEELNERYTFLSEQRTDLRKAKETLEQIISEMDQEVT
                     ERFKETFHAIQGHFTAVFKQLFGGGDAELQLTEADYLTAGIDIVVQPPGKKLQHLSLL
                     SGGERALTAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAKYLNELSDETQFIVI
                     THRKGTMEFADRLYGVTMQESGVTKLVSVNLNTIDDVLKEEQ"
     gene            24437..25687
                     /gene="ftsY"
                     /locus_tag="O6Y56_000177"
     CDS             24437..25687
                     /gene="ftsY"
                     /locus_tag="O6Y56_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDB5573480.1"
                     /translation="MSFFKRLKDKFATNKENEEVKSLTEEQGQDKLEDTHSEGSTQDV
                     NDLAENAEVKKKPRKLSEADFDDDGLISIEDFEEIEAQKMGAKFKAGLEKSRQNFQEQ
                     LNNLIARYRKVDEDFFEALEEMLITADVGFNTVMTLTEELRMEAQRRNIQDTEDLREV
                     IVEKIVEIYHQEDDNSEAMNLEDGRLNVILMVGVNGVGKTTTIGKLAYRYKMEGKKVM
                     LAAGDTFRAGAIDQLKVWGERVGVDVISQSEGSDPAAVMYDAINAAKNKGVDILICDT
                     AGRLQNKTNLMQELEKVKRVINRAVPDAPHEALLCLDATTGQNALSQARNFKEVTNVT
                     GIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEQLDDLQPFNPESYVYGLFADMIEQ
                     NEEITTVENDQIVTEEKDDNHGAK"
     gene            25674..26006
                     /locus_tag="O6Y56_000178"
     CDS             25674..26006
                     /locus_tag="O6Y56_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding protein"
                     /protein_id="HDB5573481.1"
                     /translation="MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEI
                     ADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRY
                     IQQLEDLE"
     gene            26032..27399
                     /gene="ffh"
                     /locus_tag="O6Y56_000179"
     CDS             26032..27399
                     /gene="ffh"
                     /locus_tag="O6Y56_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002457378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDB5573482.1"
                     /translation="MAFEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADV
                     NFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPT
                     VVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPV
                     YSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEI
                     MLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGM
                     SEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDF
                     LEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNPD
                     TLNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKGKRNQMQNMLKG
                     MNLPF"
     gene            27745..28020
                     /gene="rpsP"
                     /locus_tag="O6Y56_000180"
     CDS             27745..28020
                     /gene="rpsP"
                     /locus_tag="O6Y56_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDB5573483.1"
                     /translation="MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPTS
                     ANAPEIKVDEALALKWLNDGAKPTDTVHNILSKEGIMKKFDEQKKAK"
     gene            28208..28711
                     /gene="rimM"
                     /locus_tag="O6Y56_000181"
     CDS             28208..28711
                     /gene="rimM"
                     /locus_tag="O6Y56_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HDB5573484.1"
                     /translation="MRVEVGQIVNTHGIKGEIKVKSNSDFTDVRFQPGQVLTVVHNNN
                     DLEYTVKSHRVHKGLHMLTFEGINNINDIEHLKGSSIYQERDHEDIVLEENEYYYSDI
                     IGCTVFDDQETPIGRVINIFETGANDVWVIKGSKEYLIPYIADVVKEVDVENKKIIIT
                     PMEGLLD"
     gene            28711..29448
                     /gene="trmD"
                     /locus_tag="O6Y56_000182"
     CDS             28711..29448
                     /gene="trmD"
                     /locus_tag="O6Y56_000182"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDB5573485.1"
                     /translation="MKIDYLTLFPEMFAGVLNHSIMKRAQENNKLQINTVNFRDYAIN
                     KHNQVDDYPYGGGQGMVLKPEPVFNAMEDLDVTEQTRVILMCPQGEPFSHQKAVELSK
                     ADHIVFICGHYEGYDERIRTHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGN
                     EQSHQDDSFSDGLLEFPQYTRPREFKGLTVPDVLLSGNHANIDAWRHEQKLIRTYNKR
                     PDLIEKYPLTNADKQILERYKIGLKKG"
     gene            29551..29901
                     /gene="rplS"
                     /locus_tag="O6Y56_000183"
     CDS             29551..29901
                     /gene="rplS"
                     /locus_tag="O6Y56_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDB5573486.1"
                     /translation="MTNHKLIEAVTKSQLRTDLPSFRPGDTLRVHVRIIEGTRERIQV
                     FEGVVIKRRGGGVSETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYL
                     RSLRGKAARIQEIR"
     gene            complement(30145..32751)
                     /gene="yfhO"
                     /locus_tag="O6Y56_000184"
     CDS             complement(30145..32751)
                     /gene="yfhO"
                     /locus_tag="O6Y56_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoteichoic acid-specific glycosyltransferase
                     YfhO"
                     /protein_id="HDB5573487.1"
                     /translation="MLKKWLNSNVKQFFVITFMSVILTLILFSTHIYDYIVNGTVFSG
                     AGDGFRQMMPFQMYLYEHLSSFSSLYDASFGLGGDYMKGLSYYYSLSPLMWLNFLFIK
                     IGETVGIFNPTTIHFWPTNQLIMAMIRAIITFVVTFYLFKILHFKRSTNMIATILYGM
                     STVVIYFNFTWSFYGNLLYLLPLSILGLERYFQQRKIGIFIVAIALTLFSNFYFSYYQ
                     AIIIGCYYLYRLIFTYKYDIVSRTQKLICVISATVLSVLSSVFGLFTGISAFLENDRK
                     QNPNVDIPFLTPLDYHYFFFSDGFFITISILTFVALLSFKLYRFYFYRLFAIITWILF
                     IGSLSQYFDSAFNGFSFPERRWVYILALSSSALCGLFIQHLSTLNMKYYLIRTIPVSI
                     IALLYVLLSPTHPLALIVGIILLMVLAVILKFSLWRYKKLTVAILVLIVMIQQIVILD
                     NNKNMAIKPYQQSLSTLKQHDYHSNYVNQLIKKINQNATGPFNRIDYMSDYALNSPFI
                     YHYNGISLYSSIFNGDILKYYDKTLQINMPIDKNSTYRLLGNRQNLLSLWNVNDRIRV
                     NHDDNLPYGFKINSEHKDNKVRWIHSKNTIHYPSAHITNKVFSNKELKSPLDKEQAML
                     QGIVSNNTKDVNTHFKANKNLLSDSTIKLNSAAWQSPTKHLLQVKQNNGGLTVQLPKS
                     VSNQFKDLYFEMDLELLSPDKAHDVKVNEYTQERNKLTYKYRRFVTPVTIRIKASDRI
                     RLSLPKGKYRVNLKGIYGEDYTTLKDASNSLEAVKVSKTKQGYTITKNKNSSGYIVLP
                     TAYNQGMKATSGDQSLKVEQVNGVMTGIKAPKNITKIQLSYTPPYYYLLITITIFGII
                     CSIIFTRWARQK"
     gene            33152..34036
                     /gene="ylqF"
                     /locus_tag="O6Y56_000185"
     CDS             33152..34036
                     /gene="ylqF"
                     /locus_tag="O6Y56_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HDB5573488.1"
                     /translation="MVIQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMI
                     DEVINQKPRVVILNKKDMSNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIK
                     ATAEKFEREKAKGLKPRAIRAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQW
                     IKVGNALQLLDTPGILWPKFEDEEVGKKLSLTGAIKDSIVHLDEVAIYGLNFLIQNDL
                     ARLKAHYKIEVPEDAEIIAWFDAIGKKRGLIRRGNEIDYEAVIELIIYDIRNAKIGNY
                     CFDIFKDMTEELANDANN"
     gene            34020..34787
                     /locus_tag="O6Y56_000186"
     CDS             34020..34787
                     /locus_tag="O6Y56_000186"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDB5573489.1"
                     /translation="MTLTIKEVTQLINAVNTIEELENHECFLDERKGVQNAIARRRKA
                     LEKEQALKEKYVEMTYFENEILKENPNAIICGIDEVGRGPLAGPVVACATILNSNHNY
                     LGLDDSKKVPVTKRLELNEALKNEVTAFAYGIATAEEIDEFNIYKATQIAMQRAIDGL
                     SVQPTHLLIDAMTLDNALPQVSLIKGDARSVSIAAASIMAKVFRDDYMTQLSKDYPEY
                     GFEKNAGYGTKQHLLAIDDIGIMKEHRKSFEPIKSLL"
     gene            34896..36062
                     /gene="sucC"
                     /locus_tag="O6Y56_000187"
     CDS             34896..36062
                     /gene="sucC"
                     /locus_tag="O6Y56_000187"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006190114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDB5573490.1"
                     /translation="MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYV
                     VKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGC
                     AIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQA
                     RRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINF
                     DDNALFRHKDVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTI
                     NHFGGNPANFLDAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVE
                     AVKEVDLTLPLVVRLEGTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVKEA"
     gene            36084..36992
                     /gene="sucD"
                     /locus_tag="O6Y56_000188"
     CDS             36084..36992
                     /gene="sucD"
                     /locus_tag="O6Y56_000188"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDB5573491.1"
                     /translation="MSVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKG
                     GQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPV
                     LDMVKVKRYLQGRKTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYE
                     AVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEA
                     AEWIKANMTKPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAAT
                     PSEIGSTLIEAAKEAGIYESLLTVNK"
     gene            37279..37431
                     /locus_tag="O6Y56_000189"
                     /pseudo
     CDS             37279..37431
                     /locus_tag="O6Y56_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499755.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
     gene            37459..38703
                     /gene="fmhC"
                     /locus_tag="O6Y56_000190"
     CDS             37459..38703
                     /gene="fmhC"
                     /locus_tag="O6Y56_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FemA/FemB family glycyltransferase FmhC"
                     /protein_id="HDB5573492.1"
                     /translation="MKFSTLSEEEFTNYTKKHFKHYTQSIELYNYRNKINHEAHIVGV
                     KDDKNEVIAACLLTEARIFKFYKYFYSHRGPLLDYFDAKLVCYFFKELSKFIYKNRGV
                     FILVDPYLIENLRDANGRIIKNYNNSVIVKMLGKIGYLHQGYTTGYSNKSQIRWISVL
                     DLKDKDENQLLKEMEYQTRRNIKKTIEIGVKVEDLSIEETNRFYKLFQMAEEKHGFHF
                     MNEDYFKRMQEIYKDKAMLKIACIDLNEYQDKLKIQLLKIENEMMTVNRALNENPNSK
                     KNKSKLNQLNMQLSSINNRISKTEELILEDGPVLDLAAALFICTDDEVYYLSSGSNPK
                     YNQYMGAYHLQWHMIKYAKSHNINRYNFYGITGVFSNEADDFGVQQFKKGFNAHVEEL
                     IGDFIKPVRPILYKFAKLIYKV"
     gene            38875..39747
                     /gene="dprA"
                     /locus_tag="O6Y56_000191"
     CDS             38875..39747
                     /gene="dprA"
                     /locus_tag="O6Y56_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000593194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDB5573493.1"
                     /translation="MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEGGRKKDSYLCEW
                     VNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYITYMDTEYPVLLKEIYQFPLLLF
                     YKGNINLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
                     IALKYNLPTIAVLAFGHQIHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNR
                     IISGLSKGVLITEAKEQSGSHITIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAK
                     VVLNANDIFEDYYI"
     gene            39920..41995
                     /gene="topA"
                     /locus_tag="O6Y56_000192"
     CDS             39920..41995
                     /gene="topA"
                     /locus_tag="O6Y56_000192"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDB5573494.1"
                     /translation="MTLADNLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQM
                     GVDTEDNYEPKYITIRGKGPVVKELKKHAKKAKNVFLASDPDREGEAIAWHLSKILEL
                     EDSKENRVVFNEITKDAVKESFKNPREIEMNLVDAQQARRILDRLVGYNISPVLWKKV
                     KKGLSAGRVQSVALRLVIDRENEIRNFKPEEYWTIEGEFRYKKSKFNAKFLHYKNKPF
                     KLKTKKDVEKITAALDGDQFEITNVTKKEKTRNPANPFTTSTLQQEAARKLNFKARKT
                     MMVAQQLYEGIDLKKQGTIGLITYMRTDSTRISDTAKAEAKQYITDKYGESYTSKRKA
                     SGKQGDQDAHEAIRPSSTMRTPDDMKSFLTKDQYRLYKLIWERFVASQMAPAILDTVS
                     LDITQGDIKFRANGQTIKFKGFMTLYVETKDDSDSEKENKLPKLEQGDKVTATQIEPA
                     QHYTQPPPRYTEARLVKTLEELKIGRPSTYAPTIDTIQKRNYVKLESKRFVPTELGEI
                     VHEQVKEYFPEIIDVEFTVNMETLLDKIAEGDITWRKVIDGFFSSFKQDVERAEEEME
                     KIEIKDEPAGEDCEVCGSPMVIKMGRYGKFMACSNFPDCRNTKAIVKSIGVKCPKCND
                     GDVVERKSKKNRVFYGCSKYPECDFISWDKPIGRDCPKCNQYLVENKKGKTTQVICSN
                     CDYKEAAQK"
     gene            42151..43458
                     /gene="trmFO"
                     /locus_tag="O6Y56_000193"
     CDS             42151..43458
                     /gene="trmFO"
                     /locus_tag="O6Y56_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HDB5573495.1"
                     /translation="MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHT
                     DKFAELVCSNSLRGNALTNGVGVLKEEMRRLNSIIIEAADKARVPAGGALAVDRHDFS
                     GYITETLKNHENITVINEEINAIPDGYTIIATGPLTTETLAQEIVDITGKDQLYFYDA
                     AAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEK
                     EKYFEGCMPFEVMAERGRKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNI
                     VGFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQ
                     FAGQMTGVEGYVESAASGLVAGINLAHKILGKGEVVFPRETMIGSMAYYISHAKNNKN
                     FQPMNANFGLLPSLETRIKDKKERYEAQANRALDYLENFKKTL"
     gene            43876..44772
                     /gene="xerC"
                     /locus_tag="O6Y56_000194"
     CDS             43876..44772
                     /gene="xerC"
                     /locus_tag="O6Y56_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HDB5573496.1"
                     /translation="MNHIQEAFLNTLKVERNFSEHTLKSYQDDLIQFNQFLEQEHLQL
                     NTFEYRDARNYLSYLYSNHLKRTSVSRKISTLRTFYEYWMTLDENIINPFVQLVHPKK
                     EKYLPQFFYEEEMEALFKTVEEDTSKSLRDRVILELLYATGIRVSELVNIKKQDIDFY
                     ANGVTVLGKGSKERFVPFGAYCRQSIENYLEHFKPIQSCNHDFLIVNMKGEAITERGV
                     RYVLNDIVKRTAGVSEIHPHKLRHTFATHLLNQGADLRTVQSLLGHVNLSTTGKYTHV
                     SNQQLRKVYLNAHPRAKKENET"
     gene            44769..45314
                     /gene="hslV"
                     /locus_tag="O6Y56_000195"
     CDS             44769..45314
                     /gene="hslV"
                     /locus_tag="O6Y56_000195"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDB5573497.1"
                     /translation="MSNTTLHATTIYAVRHNGKAAMAGDGQVTLGQQVIMKQTARKVR
                     RLYEGKVLAGFAGSVADAFTLFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEA
                     MLIVMDKDAILVVSGTGEVIAPDDDLIAIGSGGNYALSAGRALKRHASHLSAEEMAYE
                     SLKVAADICVFTNDNIVVETL"
     gene            45380..46783
                     /gene="hslU"
                     /locus_tag="O6Y56_000196"
     CDS             45380..46783
                     /gene="hslU"
                     /locus_tag="O6Y56_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HDB5573498.1"
                     /translation="MDTAGIRLTPKEIVSKLNEYIVGQNDAKRKVAIALRNRYRRSLL
                     DEESKQEISPKNILMIGPTGVGKTEIARRMAKVVGAPFIKVEATKFTEVGYVGRDVES
                     MVRDLVDVSVRLVKAQKKSLVQDEATAKANEKLVKLLVPSMKKKASQTNNPLESLFGG
                     AIPNFGQNNEDEEEPPTEEIKTKRSEIKRQLEEGKLEKEKVRIKVEQDPGALGMLGTN
                     QNQQMQEMMNQLMPKKKVEREVAVETARKILADSYADELIDQESANQEALELAEQMGI
                     IFIDEIDKVATNNHNSGQDVSRQGVQRDILPILEGSVIQTKYGTVNTEHMLFIGAGAF
                     HVSKPSDLIPELQGRFPIRVELDSLSVEDFVRILTEPKLSLIKQYEALLQTEEVTVNF
                     TDEAITRLAEIAYQVNQDTDNIGARRLHTILEKMLEDLSFEAPSMPNAVVDITPQYVD
                     DKLKSISTNKDLSAFIL"
     gene            46808..47581
                     /gene="codY"
                     /locus_tag="O6Y56_000197"
     CDS             46808..47581
                     /gene="codY"
                     /locus_tag="O6Y56_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-sensing pleiotropic transcriptional
                     regulator CodY"
                     /protein_id="HDB5573499.1"
                     /translation="MSLLSKTRELNTLLQKHKGIAVDFKDVAQTISSVTVTNVFIVSR
                     RGKILGSSLNELLKSQRIIQMLEERHIPSEYTERLMEVKQTESNIDIDNVLTVFPPEN
                     RELFIDSRTTIFPILGGGERLGTLVLGRVHDDFNENDLVLGEYAATVIGMEILREKHS
                     EVEKEARDKAAITMAINSLSYSEKEAIEHIFEELGGTEGLLIASKVADRVGITRSVIV
                     NALRKLESAGVIESRSLGMKGTFIKVKKEKFLDELEKSK"
     gene            47632..47724
                     /locus_tag="O6Y56_000198"
     CDS             47632..47724
                     /locus_tag="O6Y56_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573500.1"
                     /translation="MAVVNEMTLMIMLKSFLYFCLIFNQIDIPH"
     gene            47923..48690
                     /gene="rpsB"
                     /locus_tag="O6Y56_000199"
     CDS             47923..48690
                     /gene="rpsB"
                     /locus_tag="O6Y56_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDB5573501.1"
                     /translation="MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQ
                     KTVKKVDEAYNFLKQVSEDGGQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLT
                     NYKTISKRIKRISEIEKMEEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQA
                     LFVVDPRKERNAIAEARKLNIPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMA
                     DAILEGQQGVSNEEVAAEQNIDLDEKEKSEETEATEE"
     gene            48724..48837
                     /locus_tag="O6Y56_000200"
     CDS             48724..48837
                     /locus_tag="O6Y56_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573502.1"
                     /translation="MGDKILMLITFFKKKIEANYKYSIRVLAILSIIMLKS"
     gene            48872..49753
                     /locus_tag="O6Y56_000201"
     CDS             48872..49753
                     /locus_tag="O6Y56_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDB5573503.1"
                     /translation="MATISAKLVKELREKTGAGMMDCKKALTETDGDIDKAIDYLREK
                     GIAKAAKKADRIAAEGLVHVETKGNDAVIVEINSETDFVARNEGFQELVKEIANQVLD
                     TKAETVEALMETTLPNGKSVDERIKEAILTIGEKLSVRRFAIRTKTDNDAFGAYLHMG
                     GRIGVLTVVEGSTDEEAARDVAMHIAAINPKYVSSEQVSEEEINHEREVLKQQALNEG
                     KPENIVEKMVEGRLRKYLQEICAVDQDFVKNPDVTVEAFLKTKGGKLVDFVRYEVGEG
                     MEKREENFADEVKGQMK"
     gene            49890..50612
                     /locus_tag="O6Y56_000202"
     CDS             49890..50612
                     /locus_tag="O6Y56_000202"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000057332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDB5573504.1"
                     /translation="MAQISKYKRVVLKLSGEALAGEKGFGINPVIIKSVAEQVAEVAK
                     MDCEIAVIVGGGNIWRGKTGSDLGMDRGTADYMGMLATVMNALALQDSLEQLDCDTRV
                     LTSIEMKQVAEPYIRRRAIRHLEKKRVVIFAAGIGNPYFSTDTTAALRAAEVEADVIL
                     MGKNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPLTVFS
                     IMEEGNIKRAVMGEKIGTLITK"
     gene            50631..51185
                     /gene="frr"
                     /locus_tag="O6Y56_000203"
     CDS             50631..51185
                     /gene="frr"
                     /locus_tag="O6Y56_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDB5573505.1"
                     /translation="MSDIINETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYY
                     GAPTPVQQLASINVPEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVP
                     ALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQ
                     KATDNSIKEIDQMIADKEKDIMSV"
     gene            51558..52328
                     /locus_tag="O6Y56_000204"
     CDS             51558..52328
                     /locus_tag="O6Y56_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HDB5573506.1"
                     /translation="MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKM
                     PRIKGHYEGMQTIKKITRVASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKT
                     FLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVH
                     SIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSY
                     SEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE"
     gene            52335..53117
                     /locus_tag="O6Y56_000205"
     CDS             52335..53117
                     /locus_tag="O6Y56_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDB5573507.1"
                     /translation="MKVRTLTAIIALIVFLPILLKGGLVLMIFANILALIALKELLNM
                     NMIKFVSVPGLISAVGLIIIMLPQHAGPWVQVIQLKSLIAMSFIVLSYTVLSKNRFSF
                     MDAAFCLMSVAYVGIGFMFFYETRSEGLHYILYAFLIVWLTDTGAYLFGKMMGKHKLW
                     PVISPNKTIEGFIGGLFCSLIVPLAMLYFVDFNMNVWILLGVTLILSLFGQLGDLVES
                     GFKRHFGVKDSGRILPGHGGILDRFDSFMFVLPLLNILLIQS"
     gene            53354..54640
                     /gene="rseP"
                     /locus_tag="O6Y56_000206"
     CDS             53354..54640
                     /gene="rseP"
                     /locus_tag="O6Y56_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000121122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDB5573508.1"
                     /translation="MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMG
                     PKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPVEPGMNVKIKLNEENEITHIILD
                     DHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
                     RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGL
                     QKGDKIVQIGKYKISEFDDVDKALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTK
                     VSSETKYVLGFQPASEHTLFKPIVYGFKSFLIGSTYIFTAVVGMLASIFTGGFSFDML
                     NGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFR
                     KPVNKKAETTIIAIGAIFMVVIMILVTWNDIRRYFL"
     gene            54660..>55210
                     /gene="proS"
                     /locus_tag="O6Y56_000207"
     CDS             54660..>55210
                     /gene="proS"
                     /locus_tag="O6Y56_000207"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDB5573509.1"
                     /translation="MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLP
                     LATRVLNNITAIVRQEMERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGR
                     QFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDA
                     YSFHADEASLDQTYQDMYQAYSR"
BASE COUNT        20581 a         7501 c        10572 g        16556 t
ORIGIN      
        1 aagtttttta aatttatgta tgtttatttg attcaaacaa aataacttaa gaggagaaag
       61 tttatgaaaa agacactggg atgtttactt ttaattatgc ttttagtcgt agcaggttgt
      121 tcgtttggtg ggaatcataa attatcatca aagaaatcag aagaatcaaa acaagaaact
      181 gtaaaaaaag aatcggaaga agagaaagac ccagaagttg cacactataa aaaaaataag
      241 gaaaaaatat cgaaagttaa agcagtacct gttttagaaa agatagaacc atttataacc
      301 gaaaagacat ttatgaatag cacaggtatg caagggtgga aagattataa atctttaatg
      361 aatcaagtga agttagcaga ttataatttt acaaaagagt ctaaaggtgc ttcaatggaa
      421 gatgttgata agttttttaa aaataaaaaa ggtgtaaaac gtaaagaagt tactacttat
      481 gatggtttga aacaagttaa ctattggtat gtagataaaa gtggtaaaaa aattggtggt
      541 tcagacacac ctgtttttta tgctgaaatt ttaacgaagt ataaagatgg aaagttgatt
      601 tatgcatcag ttgaacctgg atcatattca tattcaaata agaatgcggt aaatctagat
      661 aaagttgaag aacttgatga tttaagtatg ttctctaatc tgaaagatcc taaaccagta
      721 ccatatagtg ttgctcaaat ggaaatatca agcgtcccag ttacaagtgt atctttcgta
      781 acaaagggag ggaatcataa agatactaat ccagagaaag aacaagttga tatgccacaa
      841 ctagcttatt taactgtttc accacagcta taccatgata aagagcatcc agatccgcat
      901 ataattggat tagttgcctt gccatactta aatgcatcta gagattttgg gaacgcgcat
      961 tactctgttt taaataatct ttcaaaagaa atgaaagaga aattagcgag tcgttcattg
     1021 gaccttgata aatagtgtac tacattaaat aatcgcaata ataatcccga taaacaatca
     1081 gcattactgc ttatcatata gagttcgtaa taactataac tctatgattc gcaattaata
     1141 aatgattgtc atcgggattt atttttatcc atttataaag tgacattacc ttgttcatct
     1201 gcaggtttga aaacagtaat cactgcacta ataattgcta aaatgtgtgg gatacctgtc
     1261 caacagaata ttaagtgtag aataccttgc atatttttgc cggcataaaa tttatgaata
     1321 ccaaaactac ctaagaacaa tgctaataaa atataaataa ctttgtttac ttgcatttct
     1381 ttccctccag ttgaattgct tataatgaca ttagcttctc tgtttattat acccactttt
     1441 agtttaaaca ttctagttta agcattccca atcatctaaa tttcagttat tcaatcctta
     1501 caataaattt aggattacac ttcagttgca ttgtattatt ttacgtgtga aatatacgta
     1561 atgaatcaca tgacaatctt taaattgaaa aatatacatt ctatgatgta aggtcgcatt
     1621 tttaatatat ttacgttata atggtttgat gaattttatt gaggagtaag agctatggcg
     1681 attaaaaagt tagtaccagc atcgcatcct attttaacga aaaaagcgca agcagttata
     1741 aaatttgatg attcgttaaa aagattatta caagatttag aagatacaat gtatgcacaa
     1801 gaagctgctg gcttatgtgc acctcaaatt aatcagtcat tgaaagtggc aatcattgat
     1861 atggaaatgg aaggattatt acaacttgtt aatccgaaaa ttattagtca atcaaatgaa
     1921 acgataacag acttagaagg ttcaattaca ttgccaaatg tttacggcga agtgacaaga
     1981 agtaaaatga tcgttgtcga aagttatgac gtcaatggga acaaagttga actaactgca
     2041 catgaagatg tagcaagaat gattttgcat attatagatc aaatgaacgg tatccctttt
     2101 acagaacgtg cggaccgtat tttaacagat aaagaagtgg aggcatattt tataaatgac
     2161 taaaataata tttatgggta caccagactt ttcaacaact gttttagaaa tgcttattgc
     2221 agaacatgat gtcattgcag tcgtaacgca accagatcga cctgttggac gcaaacgtgt
     2281 tatgacacca ccaccagtta aaaaagttgc aatgaaacat gatttacctg tatatcagcc
     2341 tgaaaaatta agtggatcag aagaattaga acaattgctt caattagatg tagatttaat
     2401 tgtaactgct gcttttggac aattattacc tgaatcattg ttggcattac caaaacttgg
     2461 cgcaattaat gtacatgcat cattgttacc gaagtataga ggtggtgcac caattcatca
     2521 ggcaattatc gatggtgaac aagaaaccgg cataacaatt atgtatatgg ttaaaaaatt
     2581 agatgcgggt aatattattt cgcaacaagc aattaaaata gaagaaaatg ataatgtcgg
     2641 tacgatgcat gataaattaa gtgtattagg ggcagattta ttaaaagaaa ctttaccatc
     2701 tattatagtg ggcacaaatg aaagtgtacc tcaagatgat acgcaagcaa catttgcttc
     2761 caatattcga cgcgaagatg agcgaattag ctggaataaa ccaggaagac aagtgtttaa
     2821 tcaaattcga ggattatcac catggccagt tgcttataca actatggatg acactaactt
     2881 gaaaatatac gatgctgaac tcgttgagac taataagata aacgagcccg gaacaattat
     2941 agaaacgact aaaaaagcca ttattgttgc tacaaatgat aatgaagctg ttgcaattaa
     3001 agatatgcaa ttggctggga aaaagagaat gttagctgcc aattatttaa gtggtgcgca
     3061 aaacacacta gtagggaaga aacttatatg atagaaaacg tgagaagtct tgcttttgac
     3121 acgattcaag atatattaaa tgaaggtgcg tatagtaact tgcgtatcaa tgaagtgttg
     3181 tcagaaaatg aattaaatgt aatggataaa gctttattta cagaaattgt ctacggaacc
     3241 gttaaaagaa aatatacgtt agatttttat ttaaagcctt ttgtgaaaac aaagattaag
     3301 gcatgggtta ggcaattatt atggatgagt atttatcaat atgtttattt agataaagtt
     3361 ccaaatcacg ccatcattaa tgaagcagtt gaaatagcaa aagaacgagg tggctatcac
     3421 aacggaaatg tcgtaaatgg cattttacga acaatgatgc gtagtgactt acctgatttt
     3481 aatgaaattg cagatcctaa aaaaagaatg gcaatcgagt atagtatgcc gaagtggatt
     3541 atagatcatt gggcaacaca ttttggtctc gaagaaactg aaacaatttt acagtcattt
     3601 ttagaaacga catcaacaac tgtgcgtgcc aacctgacgc gagcatcatt agatgatatt
     3661 attgaaaagt tgcaagacga aggttataac gttgaaaaag atcatgactt accttattgt
     3721 ctccatatag gaggacaacc aattattcat tctcgttcat ttaaagatgg attcgtttca
     3781 attcaagata aaagctcaat gtttgttgcg cacattatga atgtagaccg acatgatcac
     3841 gtattagatg catgtagtgc acctggcggt aaggcttgtc acattgctga agttttaatg
     3901 ccggaagggc aagttgacgc ttcagatata catgatcaca aaatagactt aattaatttt
     3961 aatataaaaa aattacgatt aacaaatatt aaagcttttc aacatgatgc gacaaaacct
     4021 tatgataaaa catacgataa gatacttgtt gatgcaccat gtagcggatt aggtgttatg
     4081 agacacaagc cagagattaa atatactcaa agcaaacaac atattgagtc actagttgat
     4141 ttacagcttg aaatattgga aaatgtaaaa aacaatgtaa aaataggtgg cgaaatcatc
     4201 tattcaacat gtacaattga gcaactagaa aatgaaaacg tgatttatac gtttttgaaa
     4261 aataataaaa acttcgaatt tgaaccgttt caacatccga taactggaga gttggtcaaa
     4321 acgttacaaa tcatgccgca agactttaat tcagatggat tctttatcac taagataaaa
     4381 agaaaggaca attaggaatg ataactgctg aaaagaaaaa gaagaataaa tttcttccaa
     4441 attttgacaa gcaatcaata tattcattgc gatttgacga aatgcaaaac tggctcgttg
     4501 aacaaggtca acaaaaattt cgagcgaaac agatttttga atggttatat caaaaaagag
     4561 tagattcgat tgatgaaatg acgaacttat cgaaaggctt acgacagctt ttaaaagata
     4621 actttactgt tacaacttta acaactgtag taaaacaaga aagtaaagac ggtacaatta
     4681 aatttttatt tgaattacaa gatggctata caattgaaac tgttttaatg agacatgatt
     4741 atggaaattc agtatgtgta acgacacaag taggttgtcg tatcggatgt acgttttgtg
     4801 cttctacact tggcggttta aaaagaaacc ttgaagctgg cgaaattgtt tcacaagttt
     4861 taacagttca aaaagccctt gatgctacag aagagcgcgt atctcaaatt gtcataatgg
     4921 gtatcggtga accatttgaa aattatgatg aaatgatgga ctttttaaga atcgtcaatg
     4981 atgataacag tttaaatatt ggtgcacgtc acattacagt atcaacatca ggtatcattc
     5041 ctagaatata tgactttgcg gatgaagata tccaaattaa ttttgctgta agcttacacg
     5101 ccgcaaaaga tgaagtgcga tcacgcttga tgccaattaa ccgtgcatat aatgttgaga
     5161 agttaatcga agcaattcaa tattatcaag aaaaaacaaa tcgtcgtgtt acttttgaat
     5221 atggtctgtt tggtggtgtg aatgaccaac tagaacatgc aagagaatta gcacatttaa
     5281 taaaaggctt aaactgccat gttaacttaa ttcctgtcaa ccatgttcca gaaagaaatt
     5341 atgtaaaaac agctaaaaat gatatcttta aatttgaaaa agaattaaag agactaggaa
     5401 ttaatgccac aatacgtcgt gaacaaggtt cagatattga cgcagcttgt ggtcaattaa
     5461 gagcaaagga acgacaagta gaaacgaggt aaagacaaat gctagaggca caatttttta
     5521 ctgatactgg acaacataga gataagaatg aagatgcggg tggtattttt tataatcaaa
     5581 ctaatcaaca acttttagtt ctgtgtgatg gtatgggcgg ccataaagca ggagaagttg
     5641 caagtaaatt tgttacagat gagttgaaat cccgttttga agcggaaaat cttatagaag
     5701 aacatcaagc tgaaaattgg ttgcgtaata atataaaaga tataaatttt cagttatatc
     5761 actatgcaca agaaaatgca gaatataaag gtatgggtac aacatgtgtt tgtgcacttg
     5821 tttttgaaaa atcagttgtg atagcaaatg tcggtgattc tagagcctat gttattaata
     5881 gtcgacaaat tgaacaaatt actagtgatc actcatttgt taatcatctt gttttaacgg
     5941 gtcaaattac gccggaagaa gcatttacac atccacaacg taatattatt acgaaggtga
     6001 tgggcacaga taaacgtgtg agtccagatt tgtttattaa gcgattaaat ttttatgatt
     6061 atttattatt aaattcagat ggattaactg attatgttaa agacaatgaa attaagcgtt
     6121 tgttagtaaa agaaggtaca atagaaggtc atggtgatca attaatgcaa ttggcattag
     6181 ataaccattc gaaagataac gttactttca tactcgcggc tattgaaggt gataaagtat
     6241 gataggtaaa ataataaatg aacgatataa aattgtagat aagcttggcg gcggtggcat
     6301 gagtaccgtt tatcttgcag aagatacgat acttaacatt aaagttgcaa ttaaggcgat
     6361 ttttatacca cctagagaaa aagaagaaac attaaaacgt tttgaacgag aagtacataa
     6421 ctcatcacag ctatcacatc aaaatatagt aagtatgatc gatgttgatg aagaagatga
     6481 ctgttactac ttagtaatgg aatatattga aggtccgact ttgtctgagt atatagaaag
     6541 tcatgggcca ttaagtgttg acacggcgat taattttacg aatcaaatat tggatggcat
     6601 taaacatgca catgatatgc gtattgtaca tagagatatt aagccacaaa atatattaat
     6661 tgacagcaat aaaacgttga aaatatttga ttttggaatt gctaaagctt taagtgagac
     6721 gtctttaact cagactaatc atgtgttagg tactgtgcag tacttttcgc cagaacaagc
     6781 aaaaggtgag gcaacggatg aatgtacaga tatttattct ataggtattg tgttatatga
     6841 aatgcttgtt ggtgaaccac catttaatgg agaaactgca gttagcattg cgattaaaca
     6901 tattcaggat tctgtgccaa atgtgacaac agatgtacgt aaggatattc cgcaatcttt
     6961 aagtaatgtc attttacgcg ctacagaaaa agacaaagcg aatcgttaca aaacaattca
     7021 agaaatgaaa gatgatttga gtagtgtttt acatgaaaat cgagcgaatg aagacgtcta
     7081 tgaactcgat aaaatgaaaa cgatagcggt acctttgaaa aaagaagatc tagcaaagca
     7141 tattagtgaa cataagtcga atcaacctaa acgtgaaacg acgcaagtac ctattgtaaa
     7201 tgggcctgct catcatcagc aattccaaaa gccagaaggt atgttgtatg aaccaaaacc
     7261 taaaaagaaa tcaacacgaa agattgtgct cttatcacta atcttttcgt tgttaatgat
     7321 tgcacttgtt tcttttgtgg caatggcaat gtttggtaat aaatacgaag agacacctga
     7381 tgtaatcggg aaatctgtaa aagaagcaga gcaaatattc aataaaaata atctgaaatt
     7441 aggtaaaatt tctagaagtt atagtgataa atatcctgaa aatgaaatta ttaagacaac
     7501 ccctaataca ggtgaacgtg ttgaacgtgg tgacagtgtt gatgttgtta tatcaaaagg
     7561 ccctgaaaag gttaaaatgc caaatgtcat tggtttacct aaggaggaag ccttacagaa
     7621 attaaaatcg ttaggtctta aagatgttac gattgaaaaa gtatataata atcaagcacc
     7681 aaaaggatac attgcaaatc aaagtgtaac cgcaaatact gaaatcgcta ttcatgattc
     7741 taatattaaa ctatatgaat ctttaggcat taagcaagtt tatgtagaag actttgaaca
     7801 taaatccttt agcaaagcta aaaaagcctt agaagaaaaa ggatttaaag ttgaaagtaa
     7861 agaagagtat agcgacgata ttgatgaggg tgatgtaatt tctcaatctc caaaagggaa
     7921 atcagtagat gaggggtcaa cgatttcgtt tgttgtttct aaaggtaaaa aaagcgactc
     7981 atcagatgtc aaaacgacaa ctgaatcggt agatgtacca tacactggta aaaatgataa
     8041 gtcacaaaaa gttaaagttt atattaaaga taaagataat gacggttcaa ctgaaaaagg
     8101 tagtttcgac attactagtg atcaacgtat agacattcct ttaagaattg aaaaaggaaa
     8161 aacagcaagt tatattgtta aagtagacgg taaaactgta gctgaaaaag aagtcagcta
     8221 tgatgatatt taaatataat tgaagtaaat gtaccgaggt ttctatttag aagtctcggt
     8281 atttttatat tgagattgcg gtagttttaa aatgcttcat gtcatcatat acaggtgagc
     8341 attgtctatg aattctgttt cactcccgca atatttatat catttgaaat gatcatttat
     8401 atattaattt tccagtcttt gatataataa atgcagtaaa attaatcgag aggtgccatt
     8461 ttgaagacag gtcgaatagt gaaatcaatt agtggggtat atcaagtaga cgttaatggc
     8521 gaacgtttca atacaaaacc acgaggatta tttagaaaga aaaaattttc accggtagtt
     8581 ggagatatag tggaatttga tgtacaaaac attaacgaag gctatattca tcaagtgtat
     8641 gagcggaaaa atgagttgaa aagaccacct gtaagtaata tagatacact agtaattgta
     8701 atgagtgctg tcgagccaaa tttttcaacg caattattag atcgattttt agttattgca
     8761 cattcgtatc agttaaatgc gagaattttg gtgacaaaaa aagataaaac accaattgaa
     8821 aagcagctcg aaattaatga gttgttgaaa atatatgaaa atattggcta tgagactgaa
     8881 tttattggaa atgatgatga tcggaaaaaa attgtagaag cttggccagc tggacttata
     8941 gtacttagtg gtcaatcagg tgtcggtaag tccactttct taaatcatta tcgtccagaa
     9001 cttaatcttg agacaaatga tatatcaaaa tcattaaatc gaggaaagca tactacaaga
     9061 catgtcgaac tattcgaacg tcaaaacggt tatattgcag acacacctgg attcagtgct
     9121 ttagattttg atcatataga taaagatgaa ataaaagatt attttcttga attaaatcga
     9181 tatggtgaaa catgtaagtt tagaaattgt aatcatatca aagaacctaa ttgtaatgtt
     9241 aagcatcaat tagagatagg gaatattgcg caatttagat acgaccatta tttacaacta
     9301 tttaatgaaa tttcaaatag aaaggttaga tattaaatga caaaactata tccatcatta
     9361 ttatctgttg attttttggt tttacaacat gaattaaaac gacttgaaga agcaggtgtc
     9421 gacggggttc attttgatgt tatggatggt caatttgtgc ctaatatatc tattggttta
     9481 ccaatattag atgcagtaag aaaaggcaca acattaccta tagacgtaca tttgatgatt
     9541 gaaaatccag aaaagtatat tgcatcattt gcagaacatg gtgccgatat gatttcaatt
     9601 catgtcgaat caacgcctca tatccatcgt gctattcaaa tgattaaaca tttagataaa
     9661 aaagctggtg tagtaattaa tcctggtaca ccaatatcac aaattgaacc tattttagac
     9721 attgttgatt atgtactggt gatgacagtt aacccagggt ttggtggtca atcatttatt
     9781 gatcaatgcg tagaaaaaat agcgggtctt aatgctatta aaatggaacg tcaattaaac
     9841 tttgatattg aagttgatgg aggcgtaaat accgatactg cgaaagtatg tgttgaaaat
     9901 ggtgctacaa tgctagtaac aggttcattt ttctttaaac aagaggatta taaaaaagtc
     9961 acacaagcat tgaaaggttg agtgtatatg catataaatt tattatgttc tgatcgacac
    10021 ttgccgcaag atatttgggc caaaagtaat gaaggtaaat ggggcggcgt tgatagaggt
    10081 gctttgattt tattgaagca tcaaattatc ccttttttct cagtaggaga ctttgattca
    10141 gtcagtaaag aagaacgcca acttctaaca gaacagttac aaatcaaacc tgttcaagct
    10201 gaaaaagctg atacggattt agctttagcg gttgataaag ctgttgcact tggatttgat
    10261 agtattacaa tttatggtgc aacaggcgga cgattagatc acttttttgg ggcaattcag
    10321 ttattattga aaaaagcata ttataaacat gatgttcata tagaagttat cgatcaacaa
    10381 aataaaattg aattattgcc taaaggtcaa catacagttg aaaaagataa gagttatccg
    10441 tacatttcat ttataccgat gactgatgat gtagaacttt ctctagcagg ttttaaatat
    10501 aatttagcta gacaaatgct taatataggt tctactttaa ctatttcaaa tgaaattgag
    10561 tctttgcaag cgaaagtaac tgtacacgat gggttgattt tgcaaattag aagtacagat
    10621 ttaaattgag tatatacaaa tttgtgaaga tttttaataa agtgcatgag gtatctaata
    10681 aagtgacgtt tatagtatag aatttatagc ataataatag atgaatcacg ctgtaattaa
    10741 tgaagattat ggcgtgattt attattgaaa ggaaaattgt aggtcctagt acattgatta
    10801 atgtgccaaa atcgatattg aacccataag tccaatttga cagagaacca ttattaaacg
    10861 ttttaaccaa attatattga tatttcgaat ttcactatga accattatgt attgttttgt
    10921 aacaaaaaaa gaactaagag gttgagctct tagttcttaa gtaaatgcat cctccacata
    10981 aggtcacatt ttttatgtgc aatatattta ttaaactcta gttactttac cagattttaa
    11041 agcacgtgca gaaacccaaa cttttttagg tttaccgtca actaggattc taactttttg
    11101 aagattagcg ttccatctac gtttagtaga gtttaaagcg tgtgaacgtc tgttaccagt
    11161 cgaagcttta cgacctgtta cgaaacattg tttacccata tgagtacctc ctttaataaa
    11221 tataaataca cataactact tatatactta actaagatag catagtttca tttgaaaaac
    11281 aatgaataat tttcacataa aagtcaaaaa tactgagttt tgtgatataa ttgtagactg
    11341 tgaagttatg tagtatgata ttttagagaa ataagtgaat gaaacattta aactttttat
    11401 ttaatgatac tacatctatt aaaagaaaac gcctatagat aatcgtcatg agtgtaaatt
    11461 cagtttactc aaaatataat aggtgattta agcgtaagtc attctgataa gttgtaccat
    11521 tgatatttta taaaaataat caatgaaact taaagcgttt atgactacac taagtggtaa
    11581 aattttaaaa gtgattaggg aaaacgaata ataaactttg aaatttagga gggacaaaga
    11641 tatgacatta gagatttcaa atgattacgg taaaattgat atttcaaacg aagtgattgc
    11701 ttcggttgta ggtggaaagg ccgttgaatg ttatggtatt gtaggtatgg catctagaca
    11761 acaagttaga gatggtattg cggaaatact aggacatgaa aattatgcta aaggcatcaa
    11821 agtaactgaa aataatggtg tagtggatat agatatgtac attattgtaa gttacggtgt
    11881 gaaaatatct gaagttgcca ataatgtaca atcaacagtg aaatatactt tggaaaaatc
    11941 acttaatgta tcagtaaatt caatcaatat atatgtacaa ggtgtacgtg tgaataatac
    12001 aggcaagaaa gcttaggagg acaacttgaa atgattagca aaattaatgg taaattattt
    12061 gccgatatga ttatacaagg ggcacaaaat ttatctaaca atgcagattt ggtagattct
    12121 ttgaatgtgt atccagtgcc agatggtgat acaggaacaa atatgaatct tactatgact
    12181 tcaggtcgcg aagaagtaga gaataatttg tcgaaaaata tcggcgaatt aggtaaaaca
    12241 ttctcgaaag gtttactaat gggtgcaaga ggtaactctg gtgtcatctt gtcacaatta
    12301 ttcagaggat tttgtaaaaa tattgaaagt gaatctgaaa ttaattcaaa attgttagct
    12361 gaaagttttc aagctggtgt tgaaacggca tataaagctg ttatgaaacc agttgaaggt
    12421 acaatactta cagttgcaaa agatgctgcg caagctgcag tagaaaaagc aaataatact
    12481 gaagattgta tagaattaat ggagtacatt attgtaaaag ccaatgaatc acttgaaaac
    12541 acaccaaact tattagctgt acttaaagaa gttggtgttg ttgatagtgg tggtaaaggt
    12601 ttgttatgcg tttacgaagg attcttaaaa gcgcttaaag gtgaaaaagt tgaagccaaa
    12661 gttgcaaagc tagataaaga tgaatttgta catgatgaac atgatttcca tggtgtaatt
    12721 aatactgaag atattattta tggctattgt actgaaatga tggttcgttt tggaaagaat
    12781 aaaaaagcct ttgatgaaca agaattcagg caagatatga gtcaatttgg tgattcttta
    12841 ttagtcatta atgatgaaga aattgtgaaa gttcacgtgc ataccgaata tccaggtaaa
    12901 gtgtttaatt atggtcaaca atatggtgaa ttaattaaac ttaaggttga aaatatgaga
    12961 gaacagcacc gtgaagtgat tcgaaaagaa cagcacacag ctaaaccgaa aatggaaacg
    13021 gttgaaacag caattattac tatttctatg ggtgaaggta tttcagagat atttaaatca
    13081 atgggtgcca cacatatcat tagtggtgga caaacgatga atccttctac agaagatatc
    13141 gttaaagtca ttgaacaatc aaaatgtaaa cgtgcaatta ttttaccgaa taataaaaat
    13201 atcttaatgg caagtgaaca agcagcgagt attgttgatg cagaagcagt tgttattcca
    13261 acgaaatcta ttcctcaagg tataagcgca ctattccaat atgatgtgga cgcaacactt
    13321 gaagaaaata aagcgcaaat ggctgattca gtaaataacg ttaaatctgg ttcattaacg
    13381 tacgctgttc gtgatacgaa aattgatggc gttgagatta aaaaagacgc ctttatgggc
    13441 ttgattgaag ataagattgt aagcagccaa agtgatcaat taacaacggt tactgagttg
    13501 ttaattgaga tgttagcaga agatagtgaa atattgactg tgattattgg tcaagatgca
    13561 gagcaagcag ttacagataa catgataaac tggatcgaag agcaatatcc agatgtagaa
    13621 gtggaagttc atgaaggtgg acaaccaatt tatcaatatt tcttttcagt agaataaaaa
    13681 tttaaaataa aaaactacca atgataaatc atcagttggt agttttttat tttgctattt
    13741 tagtgagata gcgggttaaa agtatcattc tcgagttgct aacaatgtca tgttcaactt
    13801 agtcatgata aaataaataa catactaaat gatacgtaaa atcaaataaa acataggtga
    13861 tttattttgg cgaaagtaaa cttaatagaa agtccatatt ctcttttaca attaaaaggt
    13921 ataggtccta agaaaataga agtattgcaa caattaaata ttcatacagt ggaagatctt
    13981 gttctttatt tgccaaccag atatgaagat aatacagtga ttgatttgaa tcaagcagaa
    14041 gatcaatcta acgttacgat agaaggacaa gtatatacag ctccagtagt tgcatttttt
    14101 ggaagaaata aatcaaaatt aactgttcat ttaatggtaa ataatattgc tgtcaaatgt
    14161 atttttttca accaaccgta tttaaaaaag aaaatcgaat taaatcaaac tataactgtt
    14221 aaaggtaagt ggaatagggt taaacaggaa attactggta atagggtttt ctttaattca
    14281 caaggtacac aaaatcaaga aaacgcagat gttcaattag aaccagtcta tcgtattaag
    14341 gaaggtatta aacaaaagca aatacgagac caaattagac aagcattaaa tgatgtgaca
    14401 attcatgaat ggttaactga tgaactaaga gaaaaatata aattagagac cttggacttt
    14461 actttgaaca cgttacatca tcctaaaagt aaagaggatt tattacgtgc tcgtagaacc
    14521 tatgcattta ctgaactgtt tttattcgaa ttacgtatgc aatggctaaa tagattagaa
    14581 aagtcatctg acgaagcaat tgaaattgat tatgacttag accaagttaa atcatttatt
    14641 gattgtttac cttttgaact aactgaagca cagaaatcca gtgttaatga aatttttaga
    14701 gatttaaaag caccaatacg tatgcatcga ttacttcaag gtgatgtagg ttcaggaaaa
    14761 acagtagttg ctgcaatttg tatgtatgcg ttaaaaacgg ctggttatca atcagcattg
    14821 atggtaccaa ctgaaatttt agcagagcaa catgctgaaa gtttaatggc tttatttgga
    14881 gattctatga acgttgcatt gttaactggg tcagtaaaag gtaagaaacg aaaaatactt
    14941 ttagaacaac ttgaaaatgg tacgattgat tgtttaattg gaacccatgc attgattcaa
    15001 gatgatgtaa ttttccataa tgttggttta gtaattacag atgaacaaca tcgatttggt
    15061 gtgaatcaac gccagctttt aagagaaaaa ggtgcaatga cgaatgtgtt atttatgaca
    15121 gcaaccccga taccaagaac actagcaata tcagtttttg gtgagatgga tgtgtcttca
    15181 attaaacaat taccaaaagg tcgtaaacct atcattacta cttgggcaaa gcacgagcaa
    15241 tacgataatg ttttgatgca aatgacctca gagttgaaaa aaggtcgtca agcatatgtc
    15301 atttgcccgc ttatagaaag ttctgagcat ctcgaagatg ttcaaaatgt tgtcgcattg
    15361 tacgagtctt tacaacagta ttatggtgtt tcccgtgtag ggttattgca tggtaagttg
    15421 tctgccgatg aaaaagatga agtcatgcaa aagtttagca atcatgagat agatgtttta
    15481 gtttctacta ctgttgttga agtaggtgtt aatgtaccga atgcaacttt tatgatgatt
    15541 tatgatgcgg atcgctttgg attatcaact ttacatcagt tacgcggacg tgtgggtaga
    15601 agtgaccagc aaagttactg tgttttaatt gcctccccta aaacagaaac aggaattgaa
    15661 agaatgacaa ttatgacaca aacaacggat ggatttgaat tgagtgaacg agacttagaa
    15721 atgcgtggcc ctggcgattt ctttggtgtt aaacaaagtg gattgccaga tttcttagtt
    15781 gccaatttag ttgaagatta tcgtatgtta gaagttgctc gtgatgaagc agctgaactt
    15841 attcaatctg gcgtattctt tgaaaatacg tatcaacatt tacgtcattt tgttgaagaa
    15901 aatttattac atcgtagttt tgactaatta ccatgctgat ttgtcaattt gagtgcaaca
    15961 cttcgttaat tgagtgatat gacacttgaa ctatttaaat gtaaagtggg attttaaaaa
    16021 atataaattt tcgactaaat aatagctaaa tattacagtt atttgttgag tcggttaaat
    16081 agaaagtgtt atgatatgtg aggaatgttt aagactaggt actaaaaaat gaggggtgag
    16141 acgttgaaac taaagaaaga taaacgtaga gaagcaatca gacaacaaat tgatagcaat
    16201 cccttcatca cagaccatga actaagcgac ttatttcaag tgagtataca aacaattcgt
    16261 ttagatcgca cttatttaaa cataccagaa ttaaggaagc gtattaaatt agttgctgaa
    16321 aagaattatg accaaataag ttctattgaa gaacaagaat ttattggtga tttgattcaa
    16381 gtcaatccaa atgttaaagc gcaatcaatt ttagatatta catcggattc tgtttttcat
    16441 aaaactggaa ttgcgcgtgg tcatgtgctg tttgctcagg caaattcatt atgtgttgcg
    16501 ctaattaagc aaccaacagt tttaactcat gagagtagca ttcaatttat tgaaaaagta
    16561 aaattaaatg atacggtaag agcagaagcg cgagttgtaa atcaaactgc aaaacattat
    16621 tacgtcgaag taaagtcata tgttaaacat acattagttt tcaaaggaaa ttttaaaatg
    16681 ttttatgata agcgaggata aaattatggt taaattagca attgatatga tgggtggcga
    16741 caatgcgcct gatatcgtat tagaagccgt acaaaaggct gttgaagact ttaaagatct
    16801 agaaattata cttttcggtg acgaaaaaaa gtataaactg aaccatgaac gaatcgaatt
    16861 tagacattgt tctgaaaaga ttgaaatgga agatgagcct gttagagcga ttaaacgtaa
    16921 aaaagatagc tcaatggtaa aaatggctga agctgtgaaa tctggtgagg cagatggatg
    16981 tgtgtcagca ggaaatactg gtgctttaat gtcagctggt ttattcattg ttggacgtat
    17041 taaaggtgta gctagaccgg ctttagtagt aacattgcca acgattgatg gaaaaggttt
    17101 tgtattttta gacgttggtg caaatgcaga tgctaaacct gaacacttat tacagtatgc
    17161 gcaactaggg gatatttatg ctcaaaaaat tagaggtatt gataatccga aaatctcatt
    17221 attaaatata ggtaccgagc cagctaaagg taatagttta acgaaaaaat catatgagtt
    17281 attaaatcaa gatcattcat tgaattttgt tgggaatatt gaagcgaaga cattaatgga
    17341 tggcgataca gatgttgtag ttaccgatgg ctatactggg aacatggtcc ttaaaaattt
    17401 agaaggtact gcaaaatcaa tcggtaaaat gttaaaagat acgattatga gtagtactaa
    17461 aaataaatta gcaggtgcaa tattgaagaa agatttagcc gaattcgcta aaaagatgga
    17521 ttactcagaa tacggtggtt ccgttttatt aggattggaa ggtaccgtag ttaaagcaca
    17581 cggtagttca aatgctaaag ctttttattc tgcaattaga caagcgaaaa tcgcaggaga
    17641 gcaaaatatt gtgcaaacaa tgaaagagac tgtaggtgaa tcaaatgaat aaaatagcaa
    17701 ttatttttcc gggacaaggt gcccaaaaag ttggtatggc acaagattta tataacaaca
    17761 acgatcaagc aactgaaatt ttaacttcag cagcaaacac gttagacttt gatattttag
    17821 agacaatgtt tactgacgaa gacggcaaat tgggtgaaac tgaaaacacg caaccagctt
    17881 tattgacgca tagttcggca ttattagcag cactaaaaaa tttgaatccc gattttacta
    17941 tggggcatag tttaggtgaa tattcaagtt tagttgcagc tgacgtatta tcatttgaag
    18001 atgcagttaa aattgttaga aaacgtggtc aattaatggc gcaagcattt cctactggtg
    18061 taggaagcat ggctgcagta ttgggcttag attttgataa agtcgatgaa atttgtaagt
    18121 cattatcatc tgatgacaaa ataattgaac cagcaaacat taattgccta ggtcaaattg
    18181 ttgtttcagg tcacaaagct ttaattgatg agctagtaga aaaaggtaaa tcattaggtg
    18241 caaaacgtgt catgccttta gcagtatctg gcccattcca ttcatcgcta atgaaagtga
    18301 ttgaagaaga tttttcaagt tatattaatc aatttgaatg gcgtgatgct aagtttcctg
    18361 tagttcaaaa tgtaaatgcg caaggtgaaa ctgacaaaga agtaattaaa tctaatatgg
    18421 tcaaacaatt atattcacca gtacaattca ttaactcaac agaatggcta atagaccaag
    18481 gtgttgatca ttttattgaa attggtcctg gaaaagtttt gtctggctta attaaaaaaa
    18541 taaatagaga tgttaagtta acatcaattc aaactttaga agatgtgaaa ggatggaatg
    18601 aaaatgacta agagtgcttt agtaacaggt gcatcaagag gaattggacg tagcattgcg
    18661 ttacaattag cagaagaagg atataatgta gcagtaaact atgcaggcag caaagagaaa
    18721 gctgaagcag tagtcgaaga aatcaaagct aaaggtgttg acagttttgc gatccaagca
    18781 aatgttgccg atgctgatga agttaaagca atgattaaag aagtagttag ccaatttggt
    18841 tctttagatg ttttagtaaa taatgcaggt attactcgcg ataatttatt aatgcgtatg
    18901 aaagaacaag agtgggacga tgttattgac acaaacttaa aaggtgtatt taactgtatc
    18961 caaaaagcaa caccacaaat gttaagacaa cgtagtggtg ctatcatcaa tttatcaagt
    19021 gttgttggag cagtaggtaa tccgggacaa gcaaactatg ttgcaacaaa agcaggtgtt
    19081 attggtttaa ctaaatctgc ggcgcgtgaa ttagcatctc gtggtatcac tgtaaatgca
    19141 gttgcacctg gttttattgt ttctgatatg acagatgctt taagtgatga gcttaaagaa
    19201 caaatgttga ctcaaattcc gttagcacgt tttggtcaag acacagatat tgctaataca
    19261 gtagcgttct tagcatcaga caaagcaaaa tatattacag gtcaaacaat ccatgtaaat
    19321 ggtggaatgt acatgtaata tatttgagct aaagctcatt gacacagtgg ttgactggtc
    19381 atccaatgga gaattgcctg acctagtcaa gtttgcgggg gaaattctaa gcaaccaaga
    19441 taaggttcca gaatttctcc ctaagaaaca gtaatcaata aattgataac taataagcgg
    19501 aacgcctgag ctaaagctca tgcataagaa acagtaatca ataaattgat aactgtttct
    19561 aaaatttcta cttgtttttt agaatttaaa atgggaaaat ataatagtct atgtataggc
    19621 atttttaaag gaggtgaatc gacgtggaaa atttcgataa agtaaaagat atcatcgttg
    19681 accgtttagg tgtagacgct gataaagtaa ctgaagatgc atctttcaaa gatgatttag
    19741 gcgctgactc acttgatatc gctgaattag taatggaatt agaagacgag tttggtactg
    19801 aaattcctga tgaagaagct gaaaaaatca acactgttgg tgatgctgtt aaatttatta
    19861 acagtcttga aaaataataa atcttacatc tgggtcgtca gtattgtcga ctcagttttt
    19921 ttctttaatt atcaatagtt ttaacgtaaa attaaagatg attcaagagc aacacataaa
    19981 ggagataaaa taatgtctaa acaaaagaaa agtgagatag ttaatcgttt tagaaagcgc
    20041 tttgatacta aaatgacaga gttaggcttt acttatcaaa atattgattt ataccaacaa
    20101 gcattttcgc attcgagttt tattaatgat tttaatatga atcgtttaga ccataatgag
    20161 cgtttagagt ttttgggtga tgcggtatta gaattgacgg tttcacgata tttatttgat
    20221 aaacatccca acttgccaga agggaattta acaaaaatgc gtgccactat tgtatgtgag
    20281 ccctcacttg taatatttgc gaataaaatt ggattgaacg aaatgatttt acttggtaaa
    20341 ggtgaagaga aaacaggggg acgtacaaga ccatcattaa tatcagatgc attcgaagca
    20401 tttattgggg cattgtattt ggatcaagga ctagatatag tttggaaatt tgctgagaaa
    20461 gtcattttcc cacatgtaga acaaaatgag ttattaggcg tggtagattt taaaacacaa
    20521 ttccaagaat atgtgcacca gcaaaataaa ggtgatgtaa cctataattt aataaaagaa
    20581 gagggaccgg cacatcatcg tctattcact tcagaagtta ttctgcaagg ggaagcaata
    20641 gctgaaggta aagggaaaac gaaaaaagaa tcagaacaac gtgctgctga aagtgcctat
    20701 aagcaattaa agcaaattaa atagaaattt atatgatacg acatataggt gttcgattta
    20761 ggatttatgg aagaattttt aatattttat ggaacaacct cgaaatttaa tatacaaata
    20821 ctaaaatatc gtatacgtat gttctttaaa attgtgataa ggagtttagg atggtttatt
    20881 taaaatcaat agatgccatt ggatttaagt cttttgcaga tcaaaccaat gttcaattcg
    20941 ataaaggtgt aactgcaatt gttggtccaa atggaagtgg taaaagtaat attacagatg
    21001 ctattaaatg ggtgttgggt gaacaatcgg ctaaatcatt acgtggctca aaaatggaag
    21061 atattatctt ctcaggtgca gaacatcgca aagctcaaaa ttatgctgaa gtacagttaa
    21121 gattagataa tcattctaaa aagctcagtg ttgatgaaaa cgaagttatt gtaacaagaa
    21181 gattgtatcg aagtggtgaa agtgagtact acataaataa tgaccgtgca agattaaaag
    21241 atattgccga tttattttta gattctggat tggggaaaga agcatatagc attatctcgc
    21301 aaggtagagt tgatgaaata ctaaatgcta aaccaattga tagacgtcaa attattgaag
    21361 aatcggctgg tgtacttaaa tataaaaaac gtaaagctga atcattaaat aaacttgacc
    21421 aaacagaaga taatttaacg agagtagaag acattttata tgatttggaa ggtcgcgtag
    21481 aacctctaaa agaggaggca gctatagcta aagaatataa gacactttcg caccaaatga
    21541 aacatagtga cattgtagtt acagtgcacg atattgatca atatacaaat gacaatagac
    21601 aattagatca acgtttaaat gatttacaag gtcaacaagc aaataaagaa gctgacaagc
    21661 aacgtttaag ccaacaaatt caacaatata aaggtaaacg tcatcaactt gataatgatg
    21721 ttgaatcgct taattatcaa ttagtaaaag ctacggaagc ctttgaaaaa tatacgggac
    21781 aattaaatgt tttagaagaa cgtaagaaaa atcaatctga aacaaatgca cgatatgaag
    21841 aagaacaaga aaatttaatt gagcttttag aaaatatatc aaatgagatt tctgaagctc
    21901 aagatactta taagtctctg aaaagtaaac aaaaagaact caacgctgtc attcgtgaat
    21961 tagaagaaca actatatgtt tcagacgaag cacacgatga aaaattggaa gaaattaaaa
    22021 acgaatacta tacattaatg tcagagcaat cagatgttaa caatgatatt cgttttttaa
    22081 agcatactat agaagagaat gaggctaaaa aatcaagact agattctcga ttagttgaag
    22141 tctttgagca attgaaagat attcagggtc aaataaaaac gactaaaaaa gaatatcaac
    22201 agaccaacaa agaactttct gctgtagata aagaaattaa aaatatagaa aaagacctca
    22261 ctgatacaaa aaaagcacaa aacgaatacg aagaaaaatt gtatcaagca tatcgatata
    22321 ccgaaaaaat gaaaacacgt attgatagtt tggcaacgca agaggaagaa tatacttatt
    22381 ttttcaatgg cgtcaaacat attttgaaag ctaaaaataa agaattaaag ggtattcatg
    22441 gtgcagttgc ggaaattatt gatgtgccat ctaaattaac tcaggcaatt gaaacagcat
    22501 taggtgcttc attacaacat gtcattgtag attcagaaaa agatggacgc caggctattc
    22561 aatttttaaa agaacgtaat ttaggtcgtg caacgttttt accattaaat gttataaaga
    22621 gtagagtggt agcgactgat attaagtcta ttgctaaaga ggcaaacgga tttattagta
    22681 ttgcttcgga agcagtgaaa gtagcaccag aatatcaaaa tattatcggg aatttattag
    22741 gtaatacgat tatcgttgat catttaaagc atgcaaatga attggcacgt gctattaaat
    22801 atcgaactcg tattgttact ttggaaggtg atattgtaaa tcctggtggt tctatgactg
    22861 gtggtggtgc tcgtaagtca aaaagtattc tgtctcaaaa agacgagttg acaacaatga
    22921 gacaccaatt agaagattac ttgcgtcaaa cagaatcatt tgaacaacaa tttaaagagt
    22981 tgaagataaa aagtgatcaa ttaagtgaac tgtattttga aaaaagtcaa aagcataata
    23041 cacttaaaga gcaagtgcat cattttgaaa tggagctcga tagattaact acacaagaaa
    23101 cacaaataaa aaatgatcat gaagaattcg aatttgaaaa aaatgatggt tatacgagtg
    23161 acaaaagtcg acaaactttg agtgaaaaag aaactcattt agaaagtatt aaatcatctt
    23221 taaaacgact agaagatgaa attgaacgct acacaaaact ttctaaagaa ggtaaggaaa
    23281 gcgtaactaa aacacaacaa acgttacatc agaaacaatc tgatcttgct gtggttaaag
    23341 agcgtattaa aacacaacaa cagacaatag atcgattaaa taatcaaagt caacaaacca
    23401 aacatcaatt aaatgatgtt aaagaaaaaa ttgcattctt taattcggat gaagtgatgg
    23461 gcgaacaagc ttttcaaaat attaaagatc aaattaatgg tcaacaagaa acgagaacac
    23521 gcttatctga tgaattagat aaattgaaac aacaacgtat tgagttgaat gaacaaatcg
    23581 atgcgcaaga agctacacta caagtttgtc accaagatat tttagctatc gaaaatcact
    23641 accaagatat taaagctgaa caatcaaaac tagatgtatt aattcatcat gcgatagatc
    23701 atttaaatga tgaatatcaa ttgactgttg aacgtgcaaa atctgaatat acgagtgatg
    23761 aatcgattga cgcattacgt aaaaaggtta aattaatgaa gatgtcgatt gatgaactag
    23821 gtcctgtaaa cttaaatgca attgaacaat ttgaagagtt aaatgaacgt tatacatttt
    23881 taagtgagca acgtacagat cttcgtaaag ctaaagaaac attagagcaa attataagtg
    23941 aaatggatca agaggttact gaaagattta aagaaacttt ccatgctatt caaggacatt
    24001 ttacagctgt gttcaaacaa ttgtttggtg gaggtgatgc agaattgcaa ttaactgaag
    24061 ccgattattt aacagctggt attgatattg tggtacaacc accgggtaaa aagttgcaac
    24121 atttatcgtt actaagtggt ggtgagcgtg cattaactgc tattgcttta ctatttgcaa
    24181 ttttaaaagt aagatctgca ccttttgtta tattagatga ggttgaagct gcattagatg
    24241 aagcgaatgt tattagatac gcaaaatatt taaatgagtt atcagacgaa acacaattca
    24301 ttgttattac acaccgtaaa ggaacaatgg aatttgcaga taggttatac ggtgtaacaa
    24361 tgcaagaatc aggtgttact aaacttgtga gtgtgaattt aaatacaata gatgatgtgt
    24421 tgaaggagga gcaataatga gcttttttaa acgcttaaaa gataagtttg caacaaataa
    24481 agaaaatgaa gaagttaaat ccttaacaga agaacaaggt caagacaaat tagaagatac
    24541 acattctgaa ggttcaacgc aggacgtaaa tgatttagca gaaaatgctg aagtgaaaaa
    24601 gaagccacgc aagttgagtg aagcggattt tgatgacgat ggcttaatat caattgaaga
    24661 ttttgaagaa attgaagctc aaaaaatggg tgctaaattt aaagcaggac tcgaaaaatc
    24721 tcgtcaaaat ttccaagaac aattaaataa tttgatagcg agatatcgta aagtagatga
    24781 agactttttt gaagctttag aagaaatgtt aatcactgca gacgtcggtt ttaatacagt
    24841 gatgacgtta actgaagaat tacgtatgga agcacaacga cgtaatattc aagatactga
    24901 agatttgcgt gaagtcattg ttgaaaaaat cgtagagatt taccatcaag aagatgataa
    24961 ttcagaagct atgaacttag aagatggtcg tttaaatgtc attttaatgg tcggtgtgaa
    25021 tggtgttggt aaaacaacaa caattggaaa attagcttac cgatataaaa tggaaggtaa
    25081 aaaagtaatg ttagctgcgg gcgatacttt tagagcgggt gctattgatc aattgaaagt
    25141 ttggggcgaa cgtgttggtg tagatgtaat tagccaaagt gaaggttctg atccagctgc
    25201 tgttatgtat gatgcgatta atgccgctaa aaacaaaggt gttgatattt taatctgtga
    25261 taccgctgga cgtttacaaa ataaaacaaa tctaatgcaa gaattagaaa aagttaagcg
    25321 tgtaattaat cgagcagtgc cagatgcgcc tcacgaagca ttactatgtt tagatgctac
    25381 aactggtcag aatgcgttgt cacaagctag aaacttcaaa gaagtaacaa acgttacagg
    25441 tattgtatta acgaaattag atggtacagc caaaggtggt atcgtattag ccattcgtaa
    25501 tgaattgcac attccagtta aatatgtagg tttaggtgag cagttagatg acttacaacc
    25561 atttaaccct gaaagttatg tctacggctt attcgctgat atgattgaac aaaatgaaga
    25621 aataacaaca gttgaaaatg atcaaattgt aacagaagaa aaggacgata atcatggggc
    25681 aaaatgattt agttaaaacg ttacgaatga attatttgtt tgatttttat caatccttat
    25741 tgacgaataa acaacgtaat tatttggaat tattttatct cgaagattat tctttaagtg
    25801 aaatcgcaga tacttttaat gtgagtagac aagcagttta tgataatata agaagaactg
    25861 gcgatttagt tgaagattat gaaaagaaat tggaattata ccagaaattt gagcaacgcc
    25921 gagaaatata tgatgaaatg aaacaacatt taagtaatcc agaacaaata caacgttata
    25981 ttcaacaatt agaagactta gaatagatat aaattgaggg aggacatcga tatggcattt
    26041 gaaggcttat cagaacgcct gcaagcgacg atgcaaaaaa tgcgtggtaa gggtaaactt
    26101 actgaagctg atataaagat aatgatgcgt gaagtaagat tagcgttact tgaggctgat
    26161 gtaaacttta aagtggtaaa agaatttatt aaaacagtat cagaacgcgc attaggttcc
    26221 gatgtaatgc aatcattaac accagggcaa caagttatta aaatagttca agatgaatta
    26281 acgaagttga tgggtggaga aaatacatcg attaatatgt cgaataaacc acctactgtt
    26341 gttatgatgg ttggtttaca aggagctggt aaaacaacaa ctgcaggtaa attagcatta
    26401 ttgatgcgta aaaaatacaa caaaaaacct atgttagttg cagcagatat ttatcgtcca
    26461 gcagcgataa atcaattaca aacagtaggg aaacaaattg atattcctgt atacagtgaa
    26521 ggagatcaag taaagccaca acaaattgta actaatgcat taaaacatgc taaagaagaa
    26581 catttagact ttgtaatcat tgatacagca ggtcgattac acatcgatga agcattgatg
    26641 aatgaattaa aagaagtaaa agacattgct aaaccaaacg aaattatgtt agttgtcgat
    26701 tcaatgacgg gtcaagatgc tgtcaatgtt gcagaatctt ttgacgatca acttgatgtc
    26761 acaggtgtta ccttaactaa attagatggt gatacacgtg gtggtgcagc tttatctatt
    26821 cgttcggtga cacaaaaacc aattaaattt gttggtatga gtgaaaagtt agatggttta
    26881 gagctattcc atcctgaacg tatggcatca cgtattttag gtatgggtga tgtgttaagt
    26941 ttaattgaaa aagcgcaaca agatgtggat caagaaaaag caaaagattt agagaaaaag
    27001 atgcgtgagt catcatttac tttagatgat tttttagaac aacttgatca ggtgaaaaat
    27061 ttaggaccac tggatgatat tatgaaaatg attccaggta tgaataaaat gaaaggtcta
    27121 gataagctta atatgagtga aaagcaaatt gatcatatta aagcgattat ccagtcaatg
    27181 acgccggctg aaagaaacaa tccagacaca ttgaatgtat cacgtaaaaa gcgtattgct
    27241 aaaggttctg gtcgttcatt acaagaagtc aatcgtttga tgaaacaatt taacgatatg
    27301 aagaaaatga tgaaacaatt cactggtggc ggtaaaggta aaaaaggtaa acgcaatcaa
    27361 atgcaaaata tgttaaaagg tatgaattta ccgttttaat gtttaatata aacaccaatc
    27421 tttatttcaa cttaaggttg gtgtttttgc attaataata ttgtaattaa agttatttag
    27481 agggacatgt acagttgtag taagtagtac cgttcatgtg aatataatgt ttaattatat
    27541 cattttgtat aacttggtag taaatgcact caggaaaagt attaagcgtt tcatcgagct
    27601 aatttaattt ttctagattt tgggataaaa tattcaataa atttctaggt aaagaaaaaa
    27661 ctctttacaa acattcatac acctgttaat attatttctt gtagaaaata aaaattaaaa
    27721 catgacttaa aggagatttt ataaatggca gttaaaattc gtttaacacg tttaggttca
    27781 aaaagaaatc cattctatcg tatcgtagta gcagatgctc gttctccacg tgacggacgt
    27841 atcatcgaac aaatcggtac ttataaccca acgagcgcta atgctccaga aattaaagtt
    27901 gacgaagcgt tagctttaaa atggttaaat gatggtgcga aaccaactga tacagttcac
    27961 aatatcttat caaaagaagg tattatgaaa aaatttgacg aacaaaagaa agctaagtaa
    28021 tttagcgtaa aattgttcta acaataagaa taactcgttt acactgacag ttattactca
    28081 atgatacgtt gggaatatca catgttagta atatagaacg tattgggtac cataatggtg
    28141 ccctttttct ttgaattatt ttcaattaaa atagaagtgt tcaaagcata gagttggagg
    28201 taatagaatg agagttgaag ttggtcaaat tgttaacaca catggtatta aaggtgaaat
    28261 taaagtaaaa tccaattcag actttacaga cgttcgtttt caacccggtc aagtgctgac
    28321 agttgtgcat aacaataacg accttgaata tactgttaag tcacatagag tgcataaagg
    28381 gcttcatatg ctcacatttg aaggtattaa taatattaat gatattgagc atttaaaagg
    28441 gagttctatt tatcaagagc gtgatcatga agatatcgta cttgaggaaa atgaatatta
    28501 ttattcagat attataggat gtacagtttt tgatgatcaa gaaacaccaa taggtcgtgt
    28561 aattaatata tttgaaacag gtgcgaatga tgtgtgggtg attaaaggat ctaaagaata
    28621 tttgattcct tatattgctg atgttgtaaa agaagtggat gttgaaaata aaaaaattat
    28681 catcacgcca atggaaggat tgttggatta atgaaaattg attatttaac tttatttcct
    28741 gaaatgtttg ctggtgtttt aaatcattca attatgaaac gtgcccaaga aaacaataaa
    28801 ttacaaatca atacggttaa ttttagagat tatgcaatta acaagcacaa ccaagtagat
    28861 gattatccgt atggtggcgg acaaggtatg gtgttaaagc ctgaacctgt ttttaatgcg
    28921 atggaagact tagatgtcac agaacaaaca cgcgttattt taatgtgtcc acaaggcgag
    28981 ccattttcac atcagaaagc tgttgaatta agcaaggctg accacatcgt tttcatatgc
    29041 ggacattatg aaggttacga tgaacgtatc cgaacacatc ttgtcacaga tgaaatatca
    29101 atgggtgact atgttttaac aggtggagaa ttgccagcga tgaccatgac tgatgctatt
    29161 gttagactga ttccaggtgt tttaggtaat gaacagtcac atcaagacga ttcattttca
    29221 gatgggttat tagagtttcc gcaatataca cgtccgcgtg aatttaaggg tctaacagtt
    29281 ccagatgttt tattgtctgg aaatcatgcc aatattgatg catggagaca tgagcaaaag
    29341 ttgatccgca catataataa aagacctgac ttaattgaaa aatatccatt aactaatgca
    29401 gataagcaaa tattagaaag atataaaata ggattgaaaa aaggttagta ttgtgctaac
    29461 ataatctgag tgtggaaaca caaaaatcac tatgatccgc tgctatatat ttgtcgaggc
    29521 aagaacatag gttgaagagg agaatttata atgacaaatc acaaattaat cgaagcagta
    29581 actaaatcac aattacgtac agacttacca agtttccgtc ctggtgatac tttacgtgta
    29641 cacgtacgta tcattgaggg tactcgtgag cgtatccaag tattcgaagg cgttgtaatt
    29701 aaacgtcgtg gcggtggcgt ttctgaaacg tttacagttc gtaaaatttc atcaggtgtt
    29761 ggcgtggaac gtacattccc attacacaca ccaaaaattg aaaaaatcga agttaaacgt
    29821 cgtggtaaag tacgtcgtgc taaattatat tacttacgta gtttacgtgg taaagctgct
    29881 agaatccaag aaattcgtta atcagcattt aaacaaagct atgtatgagt catattcgac
    29941 tcaaacaaca aagccatcta ggtcactttt atggagtgat atagatggct ttttttgctg
    30001 tttagttaat gtaaagttga taatgtaatt gtttttccct tctttattca taacgtgttt
    30061 gctcaaaatg gttatataaa caaaaatcta ctaagtgcca ttgaaaagga cttagtagat
    30121 ttattaaata tatgcgtagc aacattattt ttgtcttgcc catctcgtga aaataatact
    30181 acatataatg ccaaatatag taattgttat aagtaaataa tagtatggtg gggtatagct
    30241 caattgaatc tttgttatat ttttaggtgc tttaatgccg gtcataacac catttacttg
    30301 ttcaacttta agactttgat cacctgatgt cgctttcata ccttgattat atgctgttgg
    30361 caaaacaata tacccagatg aatttttatt tttagtaata gtataacctt gctttgtctt
    30421 actaactttg acagcctcta atgaatttga agcgtcttta agcgtggtat aatcttcgcc
    30481 gtatatccct tttaaattta cacgatactt acctttaggc aatgataatc taatcctatc
    30541 tgaagcttta atgcgtatcg ttacgggtgt tacaaagcgt cgatatttat aagtgagttt
    30601 atttctttct tgtgtatatt cattcacttt aacatcatga gctttatccg gcgaaagtaa
    30661 ttctaaatcc atttcaaaat acaaatcttt aaattgatta gaaactgatt ttggcaactg
    30721 tacagttaga ccaccattat tttgtttaac ttgtaataaa tgttttgtag gagattgcca
    30781 ggctgcacta tttaatttaa ttgttgaatc tgatagtaaa tttttattgg ctttaaaatg
    30841 tgtattaaca tctttagtat tgttagaaac aatcccttgc aacattgctt gttctttatc
    30901 taatggagat tttaattctt tattggaaaa gaccttattt gtaatatgtg cacttggata
    30961 atggatggta tttttagaat gaatccaacg aactttattg tctttgtgtt cagagttaat
    31021 tttaaatcca tatggtaagt tgtcatcatg attcactcta attcgatcat taacattcca
    31081 aagtgatagt aaattttgac gattgccaag tagtctataa gtgctgtttt tatcaattgg
    31141 catattaatt tggagtgtct tgtcataata ttttaaaatg tctccattaa aaatactaga
    31201 atataatgaa atgccattat aatgatatat aaatggtgaa tttaatgcat agtctgacat
    31261 ataatcaatg cgattaaatg ggcctgttgc attttgattt atctttttta taagctggtt
    31321 tacatagtta ctatggtaat catgttgttt caacgttgat aatgattgtt gataaggttt
    31381 gattgccata tttttgttgt tatctaaaat gacgatttgt tgaatcataa cgattaatac
    31441 taatattgca acggttaatt ttttataacg ccataaacta aattttaaaa taacggcaag
    31501 caccattagc aggataatac ctactataag tgcgagaggg tgtgtcggtg atagtaatac
    31561 ataaagtaat gcgatgatgc ttactggtat tgttctgatt aaataatatt tcatatttaa
    31621 tgttgataaa tgttgaataa acaatccgca aagagcactt gatgatagtg ctaagatata
    31681 cacccaacgc ctttctggaa atgaaaaacc attaaaagca ctgtcgaaat actgtgataa
    31741 tgaaccaata aataatatcc atgttattat tgcgaaaagt ctataaaagt aaaaacgata
    31801 cagtttgaat gacaataatg caacgaaagt aagaattgaa atcgtaatga aaaatccatc
    31861 gctaaagaaa aaataatgat aatcaagtgg tgtcaaaaac ggtatatcaa cattgggatt
    31921 ttgctttctg tcattttcca aaaacgcaga aatgccagtg aataaaccaa atacacttga
    31981 taacacactc aatactgtag cagatatgac gcaaattaat ttttgtgttc tagagacaat
    32041 gtcatatttg tatgtgaaaa tgagtcgata taaatagtag caacctataa taatagcttg
    32101 ataataactg aaataaaaat tgctgaatag tgttagggct atcgcaacaa tgaaaatacc
    32161 gattttgcgt tgttgaaaat atctttccaa accaaggatc gataatggca ataaatataa
    32221 taaatttcca taaaatgacc aagtaaaatt aaagtatata acgacagttg acatgccgta
    32281 taaaatcgta gcgatcatat ttgttgagcg tttaaagtgt aatattttaa ataagtagaa
    32341 ggtcacgaca aatgttatga tagctcgtat catagccata ataagttggt ttgtcggcca
    32401 aaaatgtatt gttgtcggat taaatatacc aacagtttct cctattttaa tgaatagaaa
    32461 atttagccac attaatggtg acagcgaata ataatatgat agtcctttca tataatcgcc
    32521 acctaatcca aacgatgcat catataaact agaaaaacta cttagatgtt catacaaata
    32581 catttgaaat ggcatcattt gacggaatcc atctccagcc ccactaaaaa cagtaccatt
    32641 cacaatataa tcatagatat gagtagaaaa taaaataagc gttaatatta cactcatgaa
    32701 agttataaca aagaattgtt tgacgtttga atttagccac ttttttaaca caacattatc
    32761 ctcaactttc aaatttaaaa ttaagtttaa ctgaaactaa agttaatgag gttctcgata
    32821 ggtaaagacg aagatgactg tggaacagat accttatcat agttacttaa actttggatt
    32881 atttttagtt tatcattaaa caaatatatt gaataataaa aatgtcatac tgtattaaat
    32941 gaatatcacc taataagcag cttagattta ataaatgata atttttaatt agagaaaact
    33001 tggaataatc acttatacct taatctaaag cattgttaag aagtgtgaca atgttaaaat
    33061 aaatatagtt gaattaatga atttgttcta taattaacaa gttatagatt ttaataatga
    33121 gaaaagaatt gacgaaagta aggtgaattg aatggttatt caatggtatc caggacatat
    33181 ggcgaaagcc aaaagagaag taagtgaaca attaaaaaaa gtagatgtag tgtttgaact
    33241 agtagatgca agaattccat atagttcaag aaaccctatg atagatgaag ttattaacca
    33301 aaaaccacgt gttgttatat taaataaaaa agatatgtct aatttaaatg agatgtcaaa
    33361 atgggaacaa ttttttattg ataaaggata ctatcctgta tcagtggatg ctaagcacgg
    33421 taaaaattta aagaaagtgg aagctgcagc aattaaggcg actgctgaaa aatttgaacg
    33481 cgaaaaagcg aaaggactta aacctagagc gataagagca atgattgttg gaattccaaa
    33541 tgttggtaag tccacattaa taaataaact ggcaaagcgt agtattgcac agactggtaa
    33601 taaaccaggt gtgaccaaac aacaacaatg gatcaaagtt ggtaatgcat tacaactatt
    33661 agatacacca gggattcttt ggcctaaatt tgaagatgaa gaagtaggta agaagttgag
    33721 tttaactggt gccattaaag atagtattgt gcacttagat gaagttgcca tctatggtct
    33781 gaacttttta attcaaaatg atttagcgcg cttaaaagca cattataaaa tcgaagttcc
    33841 tgaagatgca gaaatcatag cgtggtttga tgcgataggg aaaaaacgtg gcttaattcg
    33901 acgtggtaat gaaattgatt acgaagcagt cattgaactg attatttatg atattcgaaa
    33961 tgctaaaata ggaaattatt gttttgatat ttttaaagat atgactgagg aattagcaaa
    34021 tgacgctaac aattaaagaa gtaacgcagt tgattaatgc ggttaataca atagaagaat
    34081 tagaaaatca tgaatgcttt ttagatgagc gaaaaggtgt acaaaatgcc atagccagac
    34141 gaagaaaagc gttagaaaaa gaacaagctt taaaagaaaa atatgttgaa atgacttact
    34201 ttgaaaatga aatattaaaa gagaatccca atgctattat ttgtggtatt gatgaagttg
    34261 gaaggggacc tttagcaggt ccagtcgttg catgcgcaac aattttaaat tcaaatcaca
    34321 attatttggg ccttgatgac tcgaaaaaag tacctgttac gaaacgtcta gaattaaatg
    34381 aagcactaaa aaatgaagtt actgcttttg catatggtat cgcgacagct gaagaaatag
    34441 atgaatttaa tatttataaa gctactcaaa tcgccatgca gcgagctatt gatggattat
    34501 cagtacaacc aacgcattta ttgatagacg cgatgacact tgataatgca ctgcctcaag
    34561 tatctttaat caagggtgat gcaagaagtg tgtccattgc agctgcaagt atcatggcaa
    34621 aggtttttcg tgatgattat atgacacagt tatctaaaga ttatcctgaa tatggttttg
    34681 aaaaaaatgc gggttacggt accaaacaac atttactagc aatcgatgat attggcataa
    34741 tgaaagagca tagaaaaagc tttgaaccta taaaatcgtt actgtaaatc gtaaaattca
    34801 attaaatgat aaaaaagtag catttaagtt tacaatagcg cttacatttt ttataattgt
    34861 aagggaactt aacctaagta acaggaggat ggaagatgaa tatccacgag tatcaaggta
    34921 aagaaatatt tcgttcaatg ggcgttgcag ttccagaagg acgagtagca tttactgctg
    34981 aagaagcggt ggagaaagca aaagaattaa attctgatgt atatgttgta aaagcacaaa
    35041 ttcatgctgg aggtagaggt aaagcaggcg gagtaaaaat tgctaaatct ttatctgagg
    35101 tagaaacata tgcaaaagaa ttattaggga aaactttggt gacacatcaa actggtccag
    35161 aaggtaaaga aattaagcgt ttatatatcg aagaaggttg tgctattcaa aaagaatatt
    35221 acgttggatt cgttattgat cgtgcgactg accaagtaac attgatggcg tctgaagaag
    35281 ggggcactga gattgaagaa gttgctgcga agactcctga aaagatcttc aaagaaacta
    35341 tcgatccagt aatcggactt tcaccattcc aagcaagacg aattgcgttt aatattaata
    35401 ttcctaaaga atctgttaac aaagctgcta aattcttatt agcactttat aatgtattca
    35461 ttgaaaaaga ttgttcaatc gtagaaatca acccattagt tacaacagct gatggtgatg
    35521 tattggcatt agatgctaaa attaattttg atgataatgc attattcaga cataaagatg
    35581 ttgtagaatt acgtgattta gaagaagaag atccaaaaga gattgaagcg tctaaacatg
    35641 atttatcata cattgcatta gatggtgaca tcggatgtat ggtgaatggt gcaggtttag
    35701 ccatggcaac aatggatacg attaatcatt tcggtggaaa cccagccaat ttcttagatg
    35761 caggcggaag cgctactaga gaaaaagtaa ctgaagcatt taaaatcatt ttaggtgatg
    35821 aaaatgttaa aggtattttt gtaaacattt tcggtggcat tatgaaatgt gatgttatcg
    35881 cagaaggtat cgttgaagct gtaaaagaag tagatttaac tttaccacta gttgtacgct
    35941 tagaaggtac aaatgttgag ttaggtaaaa aaatcttaaa agactcagga ttagcaattg
    36001 aaccagcagc aacaatggct gaaggtgcac aaaaaattgt taaactagtc aaagaagcat
    36061 aaggaaagga tgggagcact aagatgagtg tatttataga taagaatact aaagtaatgg
    36121 tacaaggtat tacagggtct actgcccttt tccatacaaa acaaatgctt gattatggta
    36181 cgaaaatagt agcaggtgtg acgcctggta aaggtggtca agttgttgaa ggcgttcctg
    36241 ttttcaacac tgttgaagaa gctaaaaatg aaactggggc aacggtttca gtcatttacg
    36301 ttccagcacc atttgctgca gactcaattt tagaagcagc tgatgcagac ttagatatgg
    36361 ttatttgtat cactgaacat attcctgtat tagacatggt taaagttaaa cgctacttac
    36421 aaggtagaaa aacacgttta gttggtccaa actgtccagg tgtgattaca gcagatgaat
    36481 gtaaaattgg tattatgcct ggctatattc acaaaaaagg tcatgttggt gtagtatcac
    36541 gttcaggtac actaacatat gaagcagtgc accaattgac tgaagaaggt attggtcaaa
    36601 ctacagctgt tggtattggt ggagacccag tcaacggaac aaactttatt gatgttttaa
    36661 aagcattcaa tgaagatgac gaaacgaaag cagttgttat gattggtgaa atcggtggta
    36721 cagctgaaga agaagcagct gaatggatta aagcgaatat gacaaaacca gttgtaggct
    36781 ttatcggtgg acaaacagca cctcctggaa aacgtatggg acatgctggt gcgatcattt
    36841 caggtggtaa aggtactgct gaagagaaaa ttaaaacatt aaatagttgc ggtgtgaaaa
    36901 cagcggcaac accttcagaa attggttcaa cattaattga agctgctaaa gaagcaggta
    36961 tttatgaatc attattaaca gttaataaat aaagttaaaa gatgatataa atggctatag
    37021 cccattccat actttataaa agtatcggaa atgggctatt tgtcttgcga tgaattttag
    37081 tacacttttc atatttcgga aaggcaagtt aattatttta cctccttcaa tagatttcta
    37141 aaacaaatca aatatccttc tataatatat agttcgctat gttataataa caatatatta
    37201 aagcggggtt atagcatcat gaataaataa caaagtaaac tacgtgattc aattagaaaa
    37261 gttcgttttg gaacattttt aaatggtgat tatgatggaa aattaatgaa gttccaaagt
    37321 ttagatcaaa actggaataa tggtggatgg cgtaaagcag aggttgcaca taaagttgtt
    37381 cataattatg aaaatgatat gatttttatt agaccattta aaaaagcata atttaaatcg
    37441 aaggcaggac attgaaatat gaaattttca actttaagtg aagaagaatt taccaactac
    37501 accaaaaagc acttcaaaca ttatacacag tctatagaat tatataatta tagaaataaa
    37561 ataaatcatg aagcacatat tgtgggagtg aaggatgata aaaatgaagt tatagctgca
    37621 tgtttattaa cagaggcacg tatttttaaa ttctacaaat atttctactc tcatagaggt
    37681 cctttacttg attatttcga tgctaaatta gtttgttact tttttaaaga attatctaaa
    37741 ttcatttata aaaatagagg agtatttatt cttgttgatc catatttaat agagaatttg
    37801 agagatgcaa acggtaggat aataaagaat tataataatt cagtgatagt aaagatgcta
    37861 ggaaaaattg ggtatctcca tcaaggttat acaacaggat attcaaataa aagccaaatt
    37921 aggtggattt ctgtattgga tttaaaagat aaagatgaga atcaactttt aaaagaaatg
    37981 gaataccaaa ctagaagaaa tataaaaaaa actattgaga ttggtgttaa ggttgaagat
    38041 ttatctattg aagaaacaaa tcgattttat aaattgtttc aaatggctga agaaaaacat
    38101 ggttttcatt tcatgaatga agattatttt aaacgaatgc aagaaatata taaagataag
    38161 gcaatgttaa agatagcttg catagatctt aatgaatatc aagataaatt aaaaatacaa
    38221 ttattgaaaa tcgaaaatga aatgatgact gtgaacagag cattaaatga aaatccaaat
    38281 tctaaaaaga ataaatctaa attaaatcag ttaaatatgc aattatctag tattaataat
    38341 agaattagta aaaccgaaga actaatatta gaagatggac ctgttttgga tttagctgct
    38401 gctttattta tatgtactga tgatgaagtt tattatctat caagtggatc aaatcctaaa
    38461 tataatcagt atatgggcgc atatcatcta caatggcata tgataaaata tgcaaaatca
    38521 cataatatta ataggtataa tttttatgga ataacaggcg tctttagtaa tgaggcggat
    38581 gattttggtg tacaacaatt taaaaaaggt tttaatgcac atgttgaaga attaattggt
    38641 gatttcatca aaccagtaag accaattcta tataaatttg caaaacttat ttataaggtt
    38701 tgattataaa gtatgttgga aattgaaatt taaaattctt tccaacatac ttttcacttt
    38761 ttaagtcggt attttactcc ttaaattaac attacatcga caatgttttt gtattagaaa
    38821 tgtaaaacaa aaatagaata tgattttgta tgattaaaaa aaggagttga tttattgatt
    38881 agactatttt tgcttaagtt atactgggca cacttttcga ctaaacaaat tcatcaattt
    38941 ttaatggcat atcctaatgt aattaaagag gggggcagaa aaaaagatag ttatttatgt
    39001 gaatgggtga atagggaaga aaatgttcat ttattacgta aatactatgc ttttataaaa
    39061 cttgatcata acgatattat taaagaactg cagaaattaa aagtaagtta cattacatat
    39121 atggatactg aatacccagt gctattaaaa gaaatatatc aatttccatt acttcttttc
    39181 tataaaggga acataaattt aataaataat atgcatcatt tggcagtagt aggtgcaaga
    39241 gattctacaa gttataccca acagtcttta gaatttttat tatcaaatga taaaagcaaa
    39301 tatttaacaa ttgtttccgg ccttgctcaa ggagctgatg caatggcaca tcaaatagct
    39361 ttaaaataca atctccctac aatagcagtt ttagcctttg gccatcaaat acattatccc
    39421 aaaagtacat tagcattaag aaataaaata gaagaaaaag gtttagttat atccgaatat
    39481 ccaccacata caccaattgc taaatataga tttcctgagc gcaatagaat tatcagcggt
    39541 ttgtcaaaag gggttttaat tactgaggct aaggaacaaa gtggcagtca catcacgata
    39601 gattttgcat tagagcaaaa tagaaatgtt tatgttttac ctggatctat gtttaatcct
    39661 atgacaaaag gtaatttatt acgtatccaa gaaggagcta aggtagtatt aaacgctaat
    39721 gatatatttg aagactacta tatttaaaac taaaataacg agttgcttca tatttctttt
    39781 gttacccttt gtaatttatt ttttaataaa atctataaaa aatagacagt gaaaatcatt
    39841 tgtttagata taaaacgttg acaaaagcaa aattaagcgt ttatcattta tctttagtaa
    39901 ttagattagc gagggggaaa tgacattggc agataattta gtcattgttg aatcgcctgc
    39961 aaaagcaaaa accattgaaa agtatttagg taagaaatat aaagttatag cttcaatggg
    40021 acacgtcaga gacttaccaa gaagtcaaat gggtgtcgac actgaagata attacgaacc
    40081 aaaatatata acaatacgcg gaaaaggtcc tgttgtaaaa gaattgaaaa aacatgcaaa
    40141 aaaagcgaaa aacgtctttc tcgcaagtga ccccgaccgt gaaggtgaag caattgcttg
    40201 gcatttatca aaaattttag agcttgaaga ttctaaagaa aatcgcgttg ttttcaacga
    40261 aataactaaa gacgctgtta aagaaagttt taaaaatcct agagaaattg aaatgaactt
    40321 agtcgatgca caacaagcgc gtcgaatatt agatagatta gttggctata acatctcgcc
    40381 agttctttgg aaaaaagtaa aaaaagggtt gtcagcgggt cgagttcaat ctgttgcact
    40441 tcgtttagtc attgaccgtg aaaatgaaat tcgaaacttt aaaccagaag aatattggac
    40501 tattgaagga gaatttagat acaaaaaatc aaaattcaat gctaaattcc ttcattataa
    40561 aaataaacct tttaaactaa aaacgaaaaa agatgttgag aaaattacag ctgcattaga
    40621 tggagatcaa ttcgaaatta caaacgtgac taaaaaagaa aaaacgcgta atccagcaaa
    40681 cccatttaca acttctacat tacaacaaga ggcggcacgt aaattaaact ttaaagctag
    40741 aaaaacaatg atggtcgcac aacaattata tgaaggtata gatttgaaaa aacaaggtac
    40801 gattggttta ataacatata tgagaaccga ttctacacgt atttcagata ctgccaaagc
    40861 tgaagcaaaa cagtatataa ctgataaata cggtgaatct tacacttcta aacgtaaagc
    40921 atcagggaaa caaggtgacc aagatgccca tgaggctatt agaccttcaa gtactatgcg
    40981 tacgccagat gatatgaagt catttttgac gaaagaccaa tatcgattat acaaattaat
    41041 ttgggaacga tttgttgcta gtcaaatggc tccagcaata cttgatacag tctcattaga
    41101 tataacacaa ggtgacatta aatttagagc gaatggtcaa acaatcaagt ttaaaggatt
    41161 tatgacactt tatgttgaaa ctaaagatga tagtgatagc gaaaaggaaa ataaactgcc
    41221 taaattagag caaggtgata aagtcacagc aactcaaatt gaaccagctc aacactatac
    41281 acaaccacct ccaagatata ctgaggcgag attagtaaaa acactagaag aattgaaaat
    41341 tgggcgacca tcaacttatg caccgacaat agatacgatt caaaagcgta actatgtcaa
    41401 attagaaagt aagcgttttg ttcctactga gttgggagaa atagttcatg aacaagtgaa
    41461 agaatacttc ccagagatta ttgatgtgga attcacagtg aatatggaaa cgttacttga
    41521 taagattgca gaaggcgaca ttacatggag aaaagtaatc gacggtttct ttagtagctt
    41581 taaacaagat gttgaacgtg ctgaagaaga gatggaaaag attgaaatca aagatgagcc
    41641 agccggtgaa gactgtgaag tttgtggttc tcctatggtt ataaaaatgg gacgctatgg
    41701 taagtttatg gcttgctcaa acttcccgga ttgtcgtaat acaaaagcga tagttaaatc
    41761 tattggtgtt aaatgtccaa aatgtaatga tggcgacgtc gtagaaagaa aatctaaaaa
    41821 gaatcgtgtc ttttatggat gttcgaaata tcctgaatgc gactttatct cttgggataa
    41881 gccgattgga agagattgtc caaaatgtaa ccaatatctt gttgaaaata aaaaaggcaa
    41941 gacaacacaa gtaatatgtt caaattgcga ttataaagag gcagcgcaga aataatattt
    42001 ttatttccta gagacatttt aagattgtta aatagaatca ttagtgaatc ttattttaaa
    42061 gatagtaatg gattaatcta tataagtgcg gataatataa acataacaac ataattaaaa
    42121 gacataaatg acaataaaag gagtatagaa atgactcaaa ctgtaaatgt aataggtgct
    42181 ggtcttgccg gttcagaagc ggcatatcaa ttagctgaaa gaggaattaa agttaatcta
    42241 atagagatga gacctgttaa acaaacacca gcgcaccata ctgataaatt tgcggaactt
    42301 gtatgttcca attcattacg cggaaatgct ctaactaatg gtgtgggtgt tttaaaagaa
    42361 gaaatgagaa gattgaattc tataattatt gaagcggctg ataaggcacg agttccagct
    42421 ggtggtgcat tagcagttga tagacacgat ttttcaggtt atattactga aacactcaaa
    42481 aatcatgaaa atatcacagt tattaatgaa gaaattaatg ccattccaga tggatacaca
    42541 attatcgcaa caggaccact tactacagaa acccttgcgc aagaaatagt ggacattact
    42601 ggtaaagatc aactgtattt ctatgatgca gctgctccaa ttattgaaaa agaatcaatt
    42661 gatatggata aagtttactt aaagtcccgt tatgataaag gtgaagctgc ctatttaaac
    42721 tgtcctatga ctgaggatga atttaatcgc ttttatgatg cagtattaga agctgaagtt
    42781 gcgcctgtaa attcatttga aaaagaaaaa tatttcgagg gttgtatgcc ttttgaagta
    42841 atggcagaac gcggacgcaa gacattacta tttggaccaa tgaaaccagt aggattagaa
    42901 gatccaaaga cggggaaacg tccttatgca gtggttcaat taagacaaga tgacgctgct
    42961 ggcacactct acaatattgt tggcttccaa acgcatttaa aatggggagc tcaaaaagaa
    43021 gttattaaat taattccagg tttagaaaat gttgatattg ttagatatgg tgtgatgcat
    43081 agaaatacct tcattaactc accggacgta ttaaacgaga aatatgaatt gatttcacaa
    43141 ccaaacatac agtttgcggg acaaatgact ggtgttgaag gttatgtaga aagcgcagct
    43201 agcggcttag ttgcaggtat caatcttgcg cataaaatat taggcaaagg tgaggtagta
    43261 tttccgagag aaactatgat tggaagtatg gcttactata tttctcatgc taaaaacaat
    43321 aagaatttcc aacctatgaa tgctaacttc gggttattac catctttaga aactagaatt
    43381 aaagataaaa aagaacgcta tgaagcacaa gctaatagag ctttggatta cttagaaaat
    43441 ttcaaaaaaa ctttataaaa tagttagaaa gactagatat gctattcatt cttaagtcat
    43501 caacgagtaa gtaatgactt tctaaatgga aaatacttat cctagtcttt ttaattttgg
    43561 aattgttacg tatttctgac aatttagaat tcgtattcaa aaaaatatct aaataaataa
    43621 cacgcaataa gttgattgat gtaacatgta agagaatgtt ttaaataaac tttatttaaa
    43681 agacaatgaa ataataaatg gcaaggctat taataaagac ttttagtaat taatttaaaa
    43741 aagaggtatt ctaattaaca ggttttccga ttagttacaa ttatttaatt ctcaaaagat
    43801 ttagaattga ttatcaaatt actgtaagcc ctttgctgta tatgctacaa ttcttattga
    43861 tggagggtaa atgtattgaa tcatattcaa gaagcgtttt taaatacatt gaaagttgaa
    43921 cggaattttt cggaacatac attgaaatca tatcaagatg acttaattca gtttaatcaa
    43981 tttttagaac aagaacattt acagttgaat acttttgaat acagagatgc tagaaattat
    44041 ttgagctatt tatattcaaa tcatttgaaa agaacatctg tttctcgtaa aatctcaacg
    44101 ttaagaactt tctatgaata ttggatgacg cttgatgaga acattattaa tccatttgtt
    44161 caattagtac atccgaaaaa agaaaaatat cttccgcaat tcttttacga agaagaaatg
    44221 gaagcgttat ttaaaactgt agaagaggac acttcaaaaa gtttacggga tcgagttatt
    44281 cttgaattgt tatatgctac aggcatccgt gtttcggaat tagttaatat taaaaaacaa
    44341 gatatagatt tttacgcgaa tggtgttacc gtattaggaa aagggagcaa agagcgcttt
    44401 gtaccgtttg gtgcttattg tagacaaagc atcgaaaatt atttagaaca tttcaaacca
    44461 attcagtcat gcaatcatga ttttcttatt gtaaatatga agggtgaagc aatcactgaa
    44521 cgcggtgtac gatatgtttt gaatgatatt gttaaacgaa cagcaggcgt aagtgagatt
    44581 catccccaca agctcagaca tacatttgca acgcatttat tgaatcaagg tgcagaccta
    44641 agaacagtac aatcgttatt aggtcatgtt aatttgtcaa caactggtaa atatacacac
    44701 gtatctaacc aacaattaag aaaagtgtat ctaaatgcac atcctcgagc gaaaaaggag
    44761 aatgaaacat gagtaataca acattacatg caacaacaat ttatgctgta agacataatg
    44821 ggaaagcagc tatggctgga gatgggcaag taacgcttgg tcaacaagtc atcatgaaac
    44881 aaacggcaag aaaagtgcga cgtttatatg aaggtaaagt gttagctggt ttcgcaggta
    44941 gtgtagcaga tgcgtttacg ttatttgaaa aattcgaaac aaaattacaa cagtttagtg
    45001 gtaacttaga aagagctgct gttgaattgg cacaagaatg gcgaggcgat aaacaattac
    45061 gtcaattaga agctatgcta attgtaatgg ataaagatgc tattttagtt gtcagtggaa
    45121 ctggcgaagt tattgcccca gatgatgacc ttatcgctat tggatcagga ggcaactacg
    45181 cattaagcgc aggacgtgca ttgaagcgcc atgcatcgca tttgtctgct gaagaaatgg
    45241 catatgagag cttgaaagta gcggctgata tttgtgtctt taccaacgat aatattgttg
    45301 tcgaaacact ataataatca gagcacgata aataattacg agcaattaat tttagttaaa
    45361 agacggagga atgaaattaa tggatacagc tggaataaga ttaactccaa aagaaatcgt
    45421 atctaaatta aatgaataca tcgttggaca aaatgatgct aaacgtaaag tggcaattgc
    45481 cctacgtaat cgatacagaa gaagtttatt agatgaggaa tcaaagcaag aaatttcacc
    45541 taaaaatatt ttgatgattg gtccaaccgg cgttggtaaa actgaaattg caagaagaat
    45601 ggccaaggtt gtcggcgcac catttataaa agtagaagct actaaattta ctgaggtagg
    45661 ttatgtagga cgagatgttg aaagtatggt tagagatctt gttgatgttt cagtaagatt
    45721 agtcaaggcg cagaaaaaat cattggtaca agatgaagca acagctaagg ccaatgaaaa
    45781 acttgttaag ttattagttc caagtatgaa aaagaaagca tctcaaacga ataatccttt
    45841 agagtcactt ttcggaggtg caattccaaa tttcggacaa aataacgaag atgaagaaga
    45901 accacctact gaggaaatta aaacaaaacg ttctgagatt aagagacaat tagaagaagg
    45961 caaacttgaa aaagaaaagg taagaattaa agtcgaacaa gatcctggtg ctttaggtat
    46021 gctaggtaca aatcaaaatc agcaaatgca agagatgatg aatcaattaa tgcctaaaaa
    46081 gaaagttgag cgagaagttg ctgttgagac ggcaaggaaa atcttagctg atagttatgc
    46141 ggatgaacta attgatcaag aaagcgctaa ccaagaagca cttgaattag cagaacaaat
    46201 gggtatcatc tttatagatg aaatcgacaa agttgcgacg aataatcata atagtggtca
    46261 agatgtctca agacaaggtg ttcaaagaga tattttacct atacttgaag gtagcgttat
    46321 tcaaaccaaa tatggtactg tgaatactga acatatgctg tttataggtg ctggagcttt
    46381 ccatgtatct aagccgagtg acttgatacc agaattgcaa ggtcgttttc cgattagagt
    46441 tgaacttgat agtttatcgg tagaagattt tgtaagaatt ttgacagaac caaaattgtc
    46501 attaattaaa caatatgaag cattgcttca aacagaagaa gttactgtaa actttaccga
    46561 tgaagcaatt actcgcttag ctgagattgc ttatcaagta aatcaagata cagacaacat
    46621 tggtgcacgt cgacttcata caattttaga aaagatgtta gaagatttat cattcgaagc
    46681 accaagtatg ccgaatgcag ttgtagatat taccccacaa tatgttgatg ataaattaaa
    46741 atcaatttca acaaataaag atttaagtgc atttattcta taaaaatata caaaaggaga
    46801 aaaattcatg agcttattat ctaaaacgag agagttaaac acgttacttc aaaaacacaa
    46861 aggtattgcg gttgatttta aagatgtagc acaaacgatt agtagcgtaa ctgtaacaaa
    46921 tgtatttatt gtatcgcgtc gaggtaaaat tttagggtcg agtctaaatg aattattaaa
    46981 aagtcaaaga attattcaaa tgttggaaga aagacatatt ccaagtgaat atacagaacg
    47041 attaatggaa gttaaacaaa cagaatcaaa tattgatatc gacaatgtat taacagtttt
    47101 cccacctgaa aacagagaat tattcataga tagtcgtaca actatcttcc caattttagg
    47161 tggaggagaa agattaggta cattagtact tggtcgagta catgatgatt ttaatgaaaa
    47221 tgatttggta ctaggtgaat atgctgctac agttattggt atggaaatct tacgtgagaa
    47281 gcatagtgaa gtagaaaaag aagcgcgcga taaagctgct attacaatgg caattaattc
    47341 attatcttat tctgaaaaag aagcaattga acatatcttt gaagaacttg gcggtacaga
    47401 aggcctatta atcgcatcaa aagttgcaga tagagttggt attactagat ctgtaattgt
    47461 aaatgcacta cgtaaattag aaagtgctgg tgtaattgaa tcacgttctt taggaatgaa
    47521 aggtactttc attaaagtta aaaaagaaaa attcttagat gaattagaaa aaagtaagta
    47581 agtcgatgag tctgggacat aattcaatgt cctagtcgtg acgatgttat cttggcagta
    47641 gtcaacgaaa tgactttgat gattatgttg aagtcatttc tttatttttg tctaattttc
    47701 aatcaaattg atattccaca ttaacatgat agaattacct ttaaatttat gaaaaaatgc
    47761 ttgaaaaaca tttgctttag acacggcatt atgttatatt tattttcggc tataaagcca
    47821 atacacacat atcaaacgtg attgtgtaaa gggtgcaata tttgtatatt gtctttacaa
    47881 tagtttgcta tggaggtaat taaccaatag gaggaattta taatggcagt aatttcaatg
    47941 aaacaattac tagaagcggg tgttcacttc ggtcaccaaa cacgtcgttg gaacccaaaa
    48001 atgaaaaaat atatcttcac tgagagaaat ggtatttata tcatcgactt acaaaaaaca
    48061 gtgaaaaaag tagacgaggc atacaacttc ttgaaacaag tttcagaaga tggtggacaa
    48121 gtcttattcg taggaactaa aaaacaagca caagaatcag ttaaatctga agcagaacgt
    48181 gctggtcaat tctacattaa ccaaagatgg ttaggtggat tattaactaa ctataaaacg
    48241 atctcaaaac gaatcaaacg tatttctgaa attgaaaaaa tggaagaaga tggtttattc
    48301 gaagtattac ctaaaaaaga agtagtagaa cttaaaaaag aatacgaccg tttaatcaaa
    48361 ttcttaggcg gaattcgtga tatgaaatca atgcctcaag cattattcgt agttgaccca
    48421 cgtaaagagc gtaatgcaat tgctgaagct cgtaaattaa atattcctat cgtaggtatc
    48481 gttgacacta actgtgatcc tgacgaaatt gactacgtta tcccagcaaa cgacgatgct
    48541 atccgtgcgg ttaaattatt aactgctaaa atggcagatg caatcttaga aggtcaacaa
    48601 ggcgtttcta atgaagaagt agctgcagaa caaaacatcg atttagatga aaaagaaaaa
    48661 tcagaagaaa cagaagcaac tgaagaataa tcaactgttg aatctgactt agatatagtt
    48721 taaatgggtg ataagatatt aatgcttatc acctttttta aaaagaaaat cgaggcaaat
    48781 tacaaatatt caattagagt attggcaatc ttgtctataa taatgctaaa atcataatat
    48841 ataaaatgat aacttattgg aggaataatg aatggcaact atttcagcaa aacttgttaa
    48901 agaattacgt gaaaaaactg gcgcgggtat gatggattgt aaaaaagcgc taactgaaac
    48961 tgatggtgac atcgataaag cgattgacta cctacgtgaa aaaggtattg ctaaagcagc
    49021 taaaaaagca gaccgtattg cggctgaagg tttagtacat gtagaaacta aaggtaacga
    49081 cgcagttatc gtagaaatca actctgaaac agactttgtt gctcgtaacg aaggattcca
    49141 agagttagtt aaggaaatcg ctaatcaagt attagataca aaagctgaaa ctgttgaagc
    49201 tttaatggaa acaactttac caaatggtaa atcagttgat gaaagaatta aagaagcaat
    49261 tttaacaatc ggtgaaaaat taagtgttcg tcgttttgct atcagaacta aaactgataa
    49321 cgatgctttc ggcgcttact tacacatggg tggacgcatt ggtgtattaa cagttgttga
    49381 aggttcaact gacgaagaag cagcaagaga cgttgctatg catatcgctg caatcaaccc
    49441 taaatatgtt tcttctgaac aagttagcga agaagaaatc aaccacgaaa gagaagtttt
    49501 aaaacaacaa gcattaaatg aaggtaaacc agaaaacatc gttgaaaaaa tggtggaagg
    49561 acgtttacgt aaatacttac aagaaatttg tgctgtagat caagacttcg ttaaaaaccc
    49621 tgatgtaaca gttgaagctt tcttaaaaac aaaaggtgga aaacttgttg acttcgtacg
    49681 ctatgaagta ggcgaaggta tggaaaaacg cgaagaaaac tttgcggatg aagttaaagg
    49741 acaaatgaaa taatctgtca taaagtaaaa caaggaagaa gacaccttta atgttgcttt
    49801 attaaaatgt aaatcattct aataaaacga caactgtgtc ttctttactt gtatatgtta
    49861 catatattca cgatagagag gataagaaaa tggctcaaat ttctaaatat aaacgtgtag
    49921 ttttgaaact aagtggtgaa gcgttagctg gagaaaaagg atttggcata aatccagtaa
    49981 ttattaaaag tgttgctgag caagtggctg aagttgctaa aatggactgt gaaatcgcag
    50041 taatcgttgg tggcggaaac atttggagag gtaaaacagg tagtgactta ggtatggacc
    50101 gtggaactgc tgattacatg ggtatgcttg caactgtaat gaatgcctta gcattacaag
    50161 atagtttaga acaattggat tgtgatacac gagtattaac atctattgaa atgaagcaag
    50221 tggctgaacc ttatattcgt cgtcgtgcaa ttagacactt agaaaagaaa cgtgtagtta
    50281 tttttgctgc aggcattgga aacccatact tttctacaga tactacagcg gcattacgtg
    50341 ctgcagaagt tgaagcagat gttattttaa tgggcaaaaa taatgtagat ggtgtatatt
    50401 ctgcagatcc taaagtaaac aaagatgcgg taaaatatga acatttaacg catattcaaa
    50461 tgcttcaaga aggtttacaa gtaatggatt caacagcatc ctcattctgt atggataata
    50521 acattccgtt aactgttttc tctattatgg aagaaggaaa tattaaacgt gctgttatgg
    50581 gtgaaaagat aggtacgtta attacaaaat aaatttagag gtgtaaaata atgagtgaca
    50641 ttattaatga aactaaatca agaatgcaaa aatcaatcga aagcttatca cgtgaattag
    50701 ctaacatcag tgcaggaaga gctaattcaa atttattaaa cggcgtaaca gttgattact
    50761 atggtgcacc aacacctgta caacaattag caagcatcaa tgttccagaa gcacgtttac
    50821 ttgttatttc tccatacgac aaaacttctg tagctgacat cgaaaaagcg ataatagcag
    50881 ctaacttagg tgtcaaccca acaagtgatg gtgaagtgat acgtattgct gtacctgcct
    50941 taacagaaga acgtagaaaa gagcgcgtta aagatgttaa gaaaattggt gaagaagcta
    51001 aagtatctgt tcgaaatatt cgtcgtgata tgaatgatca gttgaaaaaa gatgaaaaaa
    51061 atggcgacat tactgaagat gagttgagaa gtggtactga agatgttcag aaagcaacag
    51121 acaattcaat aaaagaaatt gatcaaatga ttgctgataa agaaaaagat attatgtcag
    51181 tataaaacta atatacaatg acatattaaa atgccagtat taaacgataa tgtaacattt
    51241 aaaatgggca tgtttaatta aatcaaagat gcatgtgata atttaaattc acaatgagca
    51301 taaaaatggt gtttaaacaa gttaattaaa catatactat ataaataata ggcattaggt
    51361 atattgctat aataaagtta tgtaattttt aacctcagta tgtatgtcac atttctggtg
    51421 taaactgtac cgagtcagac tttggtacag tttttttatt tgcttattca atgcattaaa
    51481 tgagtatgat aaaatgataa tgattgttta gtaacttata ctatatgaca gagatgatca
    51541 ggctcggagg aaagaccatg tttaaaaagc taataaataa aaagaacact ataaataatt
    51601 ataatgaaga attagactcg tctaatatac ctgaacatat cgctattatt atggatggta
    51661 atgggcgatg ggctaagaaa cgaaaaatgc ctagaattaa aggtcattac gaaggtatgc
    51721 aaacaataaa aaaaattact agggtagcta gtgatattgg tgttaagtac ttaactttat
    51781 atgccttttc cactgaaaat tggtcaagac ctgaaagtga agtaaattat attatgaatt
    51841 tgcctgtcaa tttcttaaag acatttttac cggaactaat tgaaaaaaat gtcaaagttg
    51901 aaacaattgg atttactgat aagttgccaa aatcaacgat agaagcaata aataatgcta
    51961 aagaaaaaac agctaataat accggcttaa aattaatatt tgcaattaat tatggtggca
    52021 gagcagaact tgttcatagt attaaaaata tgtttgacga gcttcatcaa caaggtttga
    52081 atagtgatat catagatgaa acatatataa acaatcattt aatgacaaaa gactatcctg
    52141 atccagagtt gttaattcgt acttcaggag aacaaagaat aagtaatttc ttgatttggc
    52201 aagtttcgta tagtgaattt atctttaatc aaaaattatg gcctgacttt gacgaagatg
    52261 aattaattaa atgtattaaa atttatcagt cacgtcaaag acgctttggc ggattgagtg
    52321 aggagtagta tagtatgaaa gttagaacgc tgacagctat tattgcctta atcgtattct
    52381 tgcctatctt gttaaaaggc ggccttgtgt taatgatatt tgctaatata ttagcattga
    52441 ttgcattaaa agaattattg aatatgaata tgattaaatt tgtttcagtt cctggtttaa
    52501 ttagtgcagt tggtcttatc attattatgt tgccacaaca tgcagggcca tgggtacaag
    52561 taattcaatt aaaaagttta attgcaatga gctttattgt attaagttat actgtcttat
    52621 ctaaaaacag atttagtttt atggatgctg cattttgctt aatgtctgtg gcttatgtag
    52681 gcattggttt tatgttcttt tatgaaacga gatcagaagg attacattac atattatatg
    52741 cctttttaat tgtttggctt acagatacag gggcttactt atttggtaaa atgatgggta
    52801 aacataagct ttggccagta ataagcccga ataaaacaat cgaaggattc ataggtggct
    52861 tgttctgtag tttgatagtg cctcttgcaa tgttatattt tgtagatttc aatatgaatg
    52921 tatggatatt acttggagtg acattgattt taagtttatt tggtcaatta ggtgatttag
    52981 tggaatcagg atttaagcgt catttcggcg ttaaagactc aggtcgaata ctacctggac
    53041 acggtggtat tttagaccga tttgacagct ttatgtttgt gttaccatta ttaaatattt
    53101 tattaataca atcttaatgc tgagaacaaa tcaataaacg taaagaggag ttgctgagat
    53161 aatttaatga atctcagaac tccttttgaa aattatacgc aatattaact ttgaaaatta
    53221 tacgcaatat taactttgaa aattagacgt tatattttgt gatttgtcag tatcatatta
    53281 taatgactta tgttacgtat acagcaatca tttttaaaat aaaagaaatt tataaacaat
    53341 cgaggtgtag cgagtgagct atttagttac aataattgca tttattattg tttttggtgt
    53401 actagtaact gttcatgaat atggccatat gttttttgcg aaaagagcag gcattatgtg
    53461 tccagaattt gcgatcggta tggggccaaa aatttttagt tttagaaaaa atgaaacact
    53521 ttacactatt aggttattgc ctgttggtgg atatgttcgt atggcaggag atggcttaga
    53581 agagccacca gtcgagcctg gtatgaacgt taaaattaaa ctgaatgaag aaaatgaaat
    53641 aacacatatc atattagatg atcatcataa gtttcaacaa attgaagcga tcgaagttaa
    53701 aaaatgtgat tttaaagatg acttattcat agaaggtatt actgcttatg ataacgaaag
    53761 acatcatttt aaaattgcta gaaagtcttt ctttgttgaa aatggtagct tagttcaaat
    53821 tgctccgaga gacagacaat ttgcacataa aaagccatgg ccgaaatttt taacattatt
    53881 tgcgggaccg ttatttaact ttatattagc tttagtccta tttattggtc ttgcatatta
    53941 tcaaggtaca cctacttcta ctgtagaaca agtcgcagat aagtatccag ctcaacaagc
    54001 aggcttacaa aaaggcgata aaattgtcca aattggcaaa tataaaatat ctgaatttga
    54061 tgatgttgat aaggcgttag ataaagttaa agataataag acgactgtta aatttgaacg
    54121 tgatggtaaa acaaagtcag ttgaattaac acctaaaaag actgaaagaa aactgactaa
    54181 agtaagttca gagacgaagt atgttctcgg attccaacca gcgagtgaac atacactctt
    54241 caaaccaatt gtatatggat ttaaaagctt tttaatcggt agtacttata tttttacagc
    54301 tgtagtcggt atgttggcta gtatatttac gggcggattc tcatttgata tgttaaatgg
    54361 tccagttggt atttatcata acgtcgactc agttgttaaa gcgggtatca ttagcttaat
    54421 tggttacact gcgttattaa gtgtaaactt aggtattatg aatttaattc ctattcctgc
    54481 actagacggt ggtcgtattt tatttgttat atatgaagcg attttcagaa aaccagttaa
    54541 taaaaaagcg gaaacaacga ttatcgctat tggtgccatt ttcatggtcg ttattatgat
    54601 attagtaacg tggaatgata ttcgacgata tttcttataa tttaggagga taaataatta
    54661 tgaagcaatc caaagttttt ataccaacga tgcgtgatgt gccatcagaa gcagaagcac
    54721 aaagtcatcg tttattattg aaatcgggtt tgataaaaca aagtacaagt gggatttata
    54781 gttatttacc gctagcaaca cgtgtgttaa ataatattac tgcaattgtg cgacaagaaa
    54841 tggaacgtat cgattctgtt gaaattttaa tgccagcgtt acaacaagct gaattatggg
    54901 aagaatcagg acgttggggt gcatatggcc cagaattaat gcgtttacaa gatagacatg
    54961 gaagacaatt tgcattaggt ccaacacatg aagaattagt tacatcaata gtaagaaatg
    55021 aattgaaatc atacaaacaa ttaccgatga cattattcca aattcaatct aaattccgtg
    55081 atgaaaagag accacgtttt ggtttacttc gtggtcgtga atttattatg aaagatgcgt
    55141 attcattcca tgctgacgag gcatcattag atcaaacgta tcaagatatg tatcaagcgt
    55201 atagccgtat
//
LOCUS       DALMNS010000004        43867 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.004, whole genome shotgun sequence.
ACCESSION   DALMNS010000004 DALMNS010000000
VERSION     DALMNS010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 43867)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43867)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43867
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.004"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..595
                     /locus_tag="O6Y56_000208"
     CDS             <1..595
                     /locus_tag="O6Y56_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000835992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDB5573510.1"
                     /translation="KEGYRDGEFKKGDKGMWTIYTDFAKSNKSDELDDEGMVLNLDRN
                     TRTAKGYYFVKKFYEKDKFSDRKNYKVEMKNNKISLLDKVNDPNLKERIENFKFFGQY
                     ANFKDLENYNNGDVSINWNVPSYDVEYKMSNKDENVKQLRSRYNIPTDKAPMLKMHID
                     GDLKGSSVGYKRLEIDFSKEDRDISVIDYLSYKPAKK"
     gene            627..1418
                     /locus_tag="O6Y56_000209"
                     /pseudo
     CDS             627..1418
                     /locus_tag="O6Y56_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000456139.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
     gene            1488..2273
                     /gene="lpl7"
                     /locus_tag="O6Y56_000210"
     CDS             1488..2273
                     /gene="lpl7"
                     /locus_tag="O6Y56_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000649614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein Lpl7"
                     /protein_id="HDB5573511.1"
                     /translation="MKCFQKLYIFILILIVLMAGCESNKITGDSKETQIKKSFVKTLD
                     VYPTKNLEDFYDKEGYRDGEFKKGDKGTWVIRSEMTTELKNENMVSKGMVIRLNRNSR
                     ICTGEYFVRIVKEDSEGKVYSDERKYPVKIENNKIIPLKPIDDEKVKKEIEEFKFFVQ
                     YGNFKELENYKDGEVTYNPEAPIYSAQYQLKNSDYNVEQLRKRYNIPTKKAPKLLLKG
                     SGNLKGSSVGYKNIEFTFVENKKENIYFTDSVYFNPSEDKYNY"
     gene            2442..3254
                     /locus_tag="O6Y56_000211"
     CDS             2442..3254
                     /locus_tag="O6Y56_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDB5573512.1"
                     /translation="MEYIKKIALYMSVLLLIIFIGGCGNMKDEQKKEAQTNKTNSKEE
                     QIKKSFAKTLDMYPIKNLEDLYDKEGYRDGEFKKDDKGTWTIYSDFAKSKKVGELDSE
                     GMVLHLNRNTRTAKGYYFVRKTYDEEDKMPQRKDYRVELKNNKIVLLDKVEDEELKHK
                     IENFKFFGQYADFKDLKNYQNGKISSNENVPFYEAEYKMENSDSNVKKLRDVYPITTS
                     ESPTLKFHIDGDIKGSSVGYKKVEYIFSRQKDNQISVSDFLNYNPSKGENNE"
     gene            3247..4572
                     /locus_tag="O6Y56_000212"
     CDS             3247..4572
                     /locus_tag="O6Y56_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000066174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573513.1"
                     /translation="MSNKFRLDHSLINNKTETTSAVSKLSYEIENANLNGLPKNNLQM
                     QFDRLKVTNEFPSNLEYIDSHTDKKYGVTASAFLNKDTGKVIIGMTGTNFKKDALAKR
                     YSGNGDKQDKIDSDETEKDLISDFEIGISPPSDKSKHYEETQEFIKKIKNKYDIDFIT
                     GHSLGGREAVILGMSNGIPNIVVYNPAPISIFNLNPNSPEGKRLLELYKNYKGNITRF
                     VAENDELTENLKKYKHFMFFGNDIVLKNGKGHSMDGFLTEQEQKAIKKELKKVQGYVE
                     ENNKSFVKNSNNAMSKLASIELLRANMMTTNGGWLSSSQQKVLESLTALTIAQSFNQL
                     IEDEINQIKKMYNEKKKKFEKNWEDAQKAGNAVGKDLTVSEVLEALNEGQVNESSMVG
                     DPEQMISLNERQLSTIGSSISNYILRVRFSINEIVDKDQVLASQIGGLL"
     gene            4569..4892
                     /locus_tag="O6Y56_000213"
     CDS             4569..4892
                     /locus_tag="O6Y56_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573514.1"
                     /translation="MMFNQINNKNELEESYNSEKKRIENELQNLNELRHRARKENERS
                     YDVFQYLKREMNYSEDAQRKMTRNIEAYEQEINEIIRKQEWKLEEYKEDLKKSYENQL
                     DKLSD"
     gene            4911..5241
                     /locus_tag="O6Y56_000214"
                     /pseudo
     CDS             4911..5241
                     /locus_tag="O6Y56_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000074802.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5525..5785)
                     /locus_tag="O6Y56_000215"
     CDS             complement(5525..5785)
                     /locus_tag="O6Y56_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573515.1"
                     /translation="MSALLYNGDKDISHERESRCINMLFVILVLYVIGIAFILLSVFG
                     SKTEGLSTKHTLYTIGSAIITIAIFISIGYAIQYLTAALYGL"
     gene            5917..7119
                     /locus_tag="O6Y56_000216"
     CDS             5917..7119
                     /locus_tag="O6Y56_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HDB5573516.1"
                     /translation="MAKIPVTVLSGYLGSGKTTLLNHILQNREGRRIAVIVNDMSEVN
                     IDKDLVADGGGLSRTDEKLVELSNGCICCTLRDDLLKEVERLVKKGGIDQIVIESTGI
                     SEPVPVAQTFSYIDDELGIDLTAICRLDTMVTVVDANRFVHDINSEDLLMDRDQSVDE
                     TDERSIADLLIDQVEFCDVLIINKIDLISEEELAKLEKVLSALQPTAKIIKTTNSEVD
                     LKEVLNTQRFDFEKASESAGWIKELESGGHASHTPETEEYGISSFVYKRRLPFHAKRF
                     NDWLESMPNNVVRSKGIVWLAQYNHVACLLSQAGSSCNIHPVTYWVASMSEAQQTQIL
                     AERQDVAAEWDPEYGDRHTQFVIIGTDLDEEKLTKELDACLVNAQEIDADWQQFEDPY
                     QWQIRPAR"
     gene            complement(7778..7840)
                     /locus_tag="O6Y56_000217"
     CDS             complement(7778..7840)
                     /locus_tag="O6Y56_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014532416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin PSM-alpha-4"
                     /protein_id="HDB5573517.1"
                     /translation="MAIVGTIIKIIKAIIDIFAK"
     gene            complement(7905..7973)
                     /locus_tag="O6Y56_000218"
     CDS             complement(7905..7973)
                     /locus_tag="O6Y56_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin PSM-alpha-3"
                     /protein_id="HDB5573518.1"
                     /translation="MEFVAKLFKFFKDLLGKFLGNN"
     gene            complement(8025..8090)
                     /locus_tag="O6Y56_000219"
     CDS             complement(8025..8090)
                     /locus_tag="O6Y56_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin PSM-alpha-2"
                     /protein_id="HDB5573519.1"
                     /translation="MGIIAGIIKFIKGLIEKFTGK"
     gene            complement(8122..8187)
                     /locus_tag="O6Y56_000220"
     CDS             complement(8122..8187)
                     /locus_tag="O6Y56_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin PSM-alpha-1"
                     /protein_id="HDB5573520.1"
                     /translation="MGIIAGIIKVIKSLIEQFTGK"
     gene            8706..10190
                     /locus_tag="O6Y56_000221"
     CDS             8706..10190
                     /locus_tag="O6Y56_000221"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase subunit 5"
                     /protein_id="HDB5573521.1"
                     /translation="MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVM
                     PVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHY
                     FPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTF
                     LCGWLAFVGAIVSIYIATGEWRVSQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLI
                     ESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDNGFAISLLLILSSISVLLGSGISLV
                     QVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNI
                     PKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEVLSALILAWSLLVSWNQMVAF
                     SKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHATTPPTISVIISVVILIFGS
                     LLSIWVARHRYSKAFAVLYVWLVNLGEARSKAIESHPNYLKKYL"
     gene            10203..12908
                     /locus_tag="O6Y56_000222"
     CDS             10203..12908
                     /locus_tag="O6Y56_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbcC family protein"
                     /protein_id="HDB5573522.1"
                     /translation="MTTQLNINSVIENAKRVITPLSPISIFAARNPWEGLEADTFEDV
                     AKWLRDVRDVDIFPNKALIESAVARGELDESVFNQLVTDMLLEHHYNIPQHYINLYID
                     NIKTLKDVPASYMNHSNVDVVADLLLEKSKRDMAESYHHYDVRPMSDAIIDEQGEPLS
                     EQVNRQMIKWTKLYIDQFLSSWTMPKREQSFYHAWLHLAQHDHSFTKAQRQVIKDLPN
                     DPKMTIESVLNHFSIAQEDYQAYVEGHLLALPGWAGMLYYRSQQHHFEQHLLTDYLTI
                     RLVVEQLLVGDEFKSVTKDCESRSENWFKQTVASWCYYSDMPSDVLLQHDVNEIQTFI
                     HFAATMNKNVFKNLWLIAWEMTYESQLKQKIKAGHESLAGVLDVNQVNVTENDNANQS
                     HSVSLNDTQAVDENNSELNQVGTSTKAQIAFCIDVRSEPFRRHIEAAGPFETIGIAGF
                     FGLPIQKDAVDEQFKHDSLPVMVPPAYRIKEFADRYDMNVYRQQQQTMSSMFYTFKLM
                     KNNVMPSLLLPELSGPFLSLSTIVNTIMPRKSRASLQKIKQKWLKKPETKLTIDREFD
                     RTSDLPVGFTEQEQIDFALQALKLMDLTEAFAPFVVLAGHASHSHNNPHHASLECGAC
                     GGASSGFNAKLLAMICNRPNVRQGLKQAGVYIPETTVFAAAEHHTSTDTLAWVYVPDT
                     LSALALDAYESLNDAMPMISEHANRERLDKLPTIGRVNHPVEEAQRFASDWSEVRPEW
                     GLGKNASFIIGRRQLTKGIDLEGRTFLHNYDWRKDKDGTLLNTIISGPALVAQWINLQ
                     YYASTVAPHFYGSGNKATQTVTSGVGVMQGNASDLMYGLSWQSVMAADRTMYHSPIRL
                     LVVIQAPDYVVARLLANNEHFARKVSNHWLRLMSVNEEGRFKSWI"
     gene            13070..13432
                     /locus_tag="O6Y56_000223"
     CDS             13070..13432
                     /locus_tag="O6Y56_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2294 domain-containing protein"
                     /protein_id="HDB5573523.1"
                     /translation="MKRTKGEIEAEISKAITQWEKDFLGRGSLSVKSDILRDMVIISL
                     QGILTPAEYRVCSTNEGLLNIKRTRSELVESGEQDLNDIIFKITGIKVMSFHSDLSTV
                     TGERIIVFKLEDNLEKHI"
     gene            complement(13660..14076)
                     /locus_tag="O6Y56_000224"
     CDS             complement(13660..14076)
                     /locus_tag="O6Y56_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573524.1"
                     /translation="MLSIISMCHKFHFTDNIKIIKFILLCILQIKHCIIEITIFCYFQ
                     FSTIYIYYTEGVRRINRVIFVYIALIITLVRFFTPIHPSFSNLIYWIFVLYFIPIILC
                     VIGFKAEKLIATMVIIPNFLGILYRLYAYVTHILFM"
     gene            14114..14788
                     /locus_tag="O6Y56_000225"
     CDS             14114..14788
                     /locus_tag="O6Y56_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HDB5573525.1"
                     /translation="MIDKKLTSPKMTVPLFLIALIVFIGMFYSVVTSQEWLKNLDMGS
                     LTWFTDYFGEPQRQYVNNLFNYYMTFSAEIGDVKGVVLISIIVTIILFIKQRHLAVWF
                     VTYLVSGVIMNKLIKDTVLRPRPYNHLAVDTGFSFPSGHSNASTLLYFALMIIIISVA
                     AKTITKVLSALVMGILWLSILFCRLYFHAHYFSDVIGGTSLAIIWVALFLMVYPYFIN
                     HRRQRV"
     gene            14825..15559
                     /locus_tag="O6Y56_000226"
     CDS             14825..15559
                     /locus_tag="O6Y56_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase"
                     /protein_id="HDB5573526.1"
                     /translation="MRIKTPSPSYLKGTNGHAILLLHSFTGTNRDVKHLAAELNDQGF
                     SCYAPNYPGHGLLLKDFMTYNVDDWWEEVEKAYQFLVNEGYESISATGVSLGGLMTLK
                     LAQHYPLKRIAVMSAPKEKSDNGLIEHLVYYSQRMSNILNLDQQASSAQLAAIDDYEG
                     EITKFQHFIDDIMTNLNVIKMPANILFGGKDAPSYETSAHFIYEHLGSVDKELNGLKD
                     SHHLMTHGEGRDILEENVIRFFNALT"
     gene            15982..17319
                     /locus_tag="O6Y56_000227"
     CDS             15982..17319
                     /locus_tag="O6Y56_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDB5573527.1"
                     /translation="MKRQQSQWKSSTGFILASAGSAIGLGAMWKFPYMAGIYGGGAFL
                     AMFLIFTIFVGLPLLIMEFTVGKMGRTYTTQIYSKLTGKKWLNIIGWNGNLAVFILFG
                     FYSVIGGWIVIYIGQVLWQLVIFQRINHLQEMNFEAVISNPWLTVLGQGIFIFATMII
                     VMLGVEKGLEKASKVMMPLLFVFLIIIVIKSLTLDGALEGVKFILQPRVSEITADGIL
                     FALGQSFFTLSLGTTGMITYASYASKDMTIKSSAISIVVMNIFVSVLAGLAIFPALHS
                     FGYEPQEGPGLLFKVLPMVFSQMHLGTLFYLGFLVLFLFAALTSSISLLELNVSNFTK
                     NDNTKRKKVAVIGSILVFIISIPATLSFGILKDVRFGAGTIFDNMDFIVSNVLMPLGA
                     LGTTLVVGQLLDKKLLQQYFGKDRFRLFSGWYYLIKYAMPVVIILVFIVQLFS"
     gene            17536..18441
                     /locus_tag="O6Y56_000228"
     CDS             17536..18441
                     /locus_tag="O6Y56_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000634108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HDB5573528.1"
                     /translation="MITYDLIGNTPLVLLEHYSDDKVKIYAKLEQWNPGGSVKDRLGK
                     YLVEMAIQEGRVRAGQTIVEATAGNTGIGLAIAANRHHLKCKIFAPYGFSEEKINIMI
                     ALGADVSRTSQSEGMHGAQLAARSYAEKYGAVYMNQFESEHNPDTYFHTLGPELTSAL
                     QQIDYFVAGIGSGGTFTGTARYLKQHHVQCYAVEPEGSVLNGGPAHAHDTEGIGSEKW
                     PIFLERSLVDGIFTIKDQDAFRNVKSLAKHEGLLVGSSSGAALQGALNLKAQLSEGTI
                     VVVFPDGSDRYMSKEIFNYEENDYE"
     gene            18434..19576
                     /locus_tag="O6Y56_000229"
     CDS             18434..19576
                     /locus_tag="O6Y56_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional cystathionine
                     gamma-lyase/homocysteine desulfhydrase"
                     /protein_id="HDB5573529.1"
                     /translation="MNKKTKLIHGGHTTDDYTGAVTTPIYQTSTYLQDDIGDLRQGYE
                     YSRTANPTRSSVESVIAALENGKHGFAFSSGVAAISAVVMLLDKGDHIILNSDVYGGT
                     YRALTKVFTRFGIEVDFVDTTNTDSIVQAIRPTTKMLFIETPSNPLLRVTDIKKSAEI
                     AKEHGLISVVDNTFMTPYYQNPLDLGIDIVLHSATKYLGGHSDVVAGLVATSDDKLAE
                     RLAFISNSTGGILGPQDSYLLVRGIKTLGLRMEQINRSVIEIIKMLQAHPAVQQVFHP
                     SIESHLNHDVHMAQADGHTGVIAFEVEDTESAKQLIKATSYYTLAESLGAVESLISVP
                     ALMTHASIPADIRAKEGITDGLVRISVGIEDTEDLVDDLKQALDTL"
     gene            19872..20897
                     /locus_tag="O6Y56_000230"
     CDS             19872..20897
                     /locus_tag="O6Y56_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HDB5573530.1"
                     /translation="MIEFRQVSKSYHKKKQTIDALKDVSFTVNRNDIFGVIGYSGAGK
                     STLVRLVNHLEAASNGQVIVDGHDITNYSDKMMRDIKKDIGMIFQHFNLLNSATVFKN
                     VAMPLILSKKSKTEIKQRVTEMLEFVGLSDKKDQFPDELSGGQKQRVAIARALVTNPK
                     ILLCDEATSALDPATTASILTLLKNVNQTFGITIMMITHEMRVIKDICNRVAVMEKGQ
                     VVETGTVKEVFSHPKTTIAQNFVSTVIQTEPSTSLIRRLNDEQVGDFKDYKIFVEETQ
                     VTQPIINDLIQICGREVKILFSSMSEIQGNTVCYMWLRFNMDQQFDDTTINQYFKEKN
                     IQFEEVH"
     gene            20901..21560
                     /locus_tag="O6Y56_000231"
     CDS             20901..21560
                     /locus_tag="O6Y56_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5573531.1"
                     /translation="MFGSDLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITR
                     KQGIWPNIVIHQVLNPLINILRSLPFIILLIAIVPFTKLVVGTSIGTTAAIVPLTVYV
                     APYIARLVENSLLEVDEGIIEAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIGLI
                     GSTAMAGAVGGGGIGDLALVYGYQRFDTTVIIITVIVLVIIVQVIQTLGNVLARFIRR
                     H"
     gene            21597..22439
                     /gene="gmpC"
                     /locus_tag="O6Y56_000232"
     CDS             21597..22439
                     /gene="gmpC"
                     /locus_tag="O6Y56_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter
                     glycylmethionine-binding lipoprotein"
                     /protein_id="HDB5573532.1"
                     /translation="MKRLIGLVIVALVLLAACGSNNDKKVTIGVASNDTKAWEKVKEL
                     AKKDDIDVEIKHFSDYNLPNKALNDGDIDMNAFQHFAFLDQYKKAHKGTKISALSTTV
                     LAPLGIYSDKIKDVKKVKDGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVK
                     DITSNPKHLKITAVDAQQTARALSDVDIAVINNGVATKAGKDPKNDPIFLEKSDSDAV
                     KPYINIVAVNDKDLDNKTYAKIVELYHSKEAQKALQEDVKDGEKPVNLSKDEIKAIET
                     SLAK"
     gene            22771..23775
                     /gene="aaa"
                     /locus_tag="O6Y56_000233"
     CDS             22771..23775
                     /gene="aaa"
                     /locus_tag="O6Y56_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autolysin/adhesin Aaa"
                     /protein_id="HDB5573533.1"
                     /translation="MQKKVIAAIIGTSAISAVAATQANAATTHTVKPGESVWAISNKY
                     GISIAKLKSLNNLTSNLIFPNQVLKVSGSSNSTSNSSRPSTNSGGGSYYTVQAGDSLS
                     LIASKYGTTYQNIMRLNGLNNFFIYPGQKLKVSGTASSSNAASNSSRPSTNSGGGSYY
                     TVQAGDSLSLIASKYGTTYQKIMSLNGLNNFFIYPGQKLKVTGNASSNSASATTTNRG
                     YNTPVFSHQNLYTWGQCTYHVFNRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRPT
                     VGSIAQTDVGYYGHVMFVERVNNDGSILVSEMNYSAAPGILTYRTVPAYQVNNYRYIH
                     "
     gene            complement(23962..24231)
                     /locus_tag="O6Y56_000234"
     CDS             complement(23962..24231)
                     /locus_tag="O6Y56_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573534.1"
                     /translation="MAKRSKSQRLSSLLNVAGFIVDGYNGYKYHAKNKKLVYLSLGLS
                     TVGTVLDFYISIKSPRKFKKAVAVVTLITNGARLFTSIRKVKHEY"
     gene            24380..24775
                     /locus_tag="O6Y56_000235"
     CDS             24380..24775
                     /locus_tag="O6Y56_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDB5573535.1"
                     /translation="MIKCVCLVEETADKILLVQVRNREKYYFPGGKIEEGESQVQALL
                     REVKEELNLTLTMDEIEYIGTIVGPAYPQQDMLTELNGFRALTKIDWENVTINNEITD
                     IRWIDKDNDALIAPAVKVWIETYGGKHDK"
     gene            24765..25250
                     /locus_tag="O6Y56_000236"
     CDS             24765..25250
                     /locus_tag="O6Y56_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5573536.1"
                     /translation="MTNNDTIMLRHYVPQDYSMLEAFQLSESDLKFVKTPEENITAAM
                     SDNERYPIVVMDDRQCVAFFTLHRGKGVAPFSDNQDAVFFRSFSVDQRYRNRGIGKVV
                     MEKLASFITSTFQDINEIVLTVNTDNPHAMALYRQQGYQYMGDSMFVGRPVHIMALTI
                     K"
     gene            complement(25419..26201)
                     /locus_tag="O6Y56_000237"
     CDS             complement(25419..26201)
                     /locus_tag="O6Y56_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibE/F family protein"
                     /protein_id="HDB5573537.1"
                     /translation="MNAVFILALLLLFLMIIFGGKKGFISYLTLFLNFAILIISIVLI
                     IFGVPIYVVTFFFCIIIGACNLFVLNSYNVKTQAAFISTIVTTILLITLIYLSVYFGH
                     LQGFSTEQQDETYVYSMNIGIDMVQFMVFTIILAVIAAVIDLTITISSPIYELHQVNP
                     TLTQYELFQSGMRVGREILATSANTIYLAFFGGQLALFIWFFKLKYSFGHIINSKIFA
                     QEFISIILGGIAVAISIPITAWITAFLIKRPSRQRKNDESIN"
     gene            complement(26198..27316)
                     /locus_tag="O6Y56_000238"
     CDS             complement(26198..27316)
                     /locus_tag="O6Y56_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibE/F family protein"
                     /protein_id="HDB5573538.1"
                     /translation="MFLKYRNLFTKPFNIILGLFCIAFIGAILFTFNNENFYNKPIGQ
                     IIDVKHVSSTPIKDAQNNRDTKYKNQLKVKILNGQFAGETTTINHQYVKSQADSEAFR
                     THEKVLLHISNKPSDAYIIEKKRDTLSVIITGLFLLTVLLVGRKVGLQSILSLILNSI
                     AILIAIYIHIQHSNINLFLLMTIAMICSTILTLLLVTGWHMRTLITVASTIIGTFLSI
                     GLTELIIYMTDGKGIKYETMNFLSLPPKDIFLASVLIGSLGAIMDVAITIASGMHEIL
                     QRTPHISMRRWALAGRNIGQDIMGTMTNILLFSYLSGALPMFLIFLKNANTVTYTISM
                     NWSLEIARALTGGIGIVLTIPITILFMEIFESLRRAKQ"
     gene            complement(27431..28315)
                     /locus_tag="O6Y56_000239"
     CDS             complement(27431..28315)
                     /locus_tag="O6Y56_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDB5573539.1"
                     /translation="MEIKQLRYFIEVAKREHISETALELNIAQSAISRQITLLEQELN
                     VSLFKKQGRNITLTSEGKLLFNEALRIIEHLDSTIEQFQSHGLTKNKSIYIGYDESDV
                     SHMLLPLIQTFHLQNDTHVIPNLLDHDTIINSVLNGNIDIGFTELTPEIRKHKQLHML
                     PLFEEHYHLYAPSDDPITMATHPPLIQFEHSHIYCLAPFAESVKKQLRKITKSDVYTI
                     SSQPLAQYLLRQKEGYIISSQNIHLPESKSWIDIKLDHTELKRTICAITKEPYTKSDI
                     GILLTLIQQLMTKTSTFH"
     gene            28497..32996
                     /gene="gltB"
                     /locus_tag="O6Y56_000240"
     CDS             28497..32996
                     /gene="gltB"
                     /locus_tag="O6Y56_000240"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HDB5573540.1"
                     /translation="MHNEKLIKGLYDYREEHDACGIGFYANMDNKRSHDIIDKSLEML
                     RRLDHRGGVGADGITGDGAGIMTEIPFAFFKQHVTDFEIPGEGEYAVGLFFSKERVLG
                     SEHEAVFKKYFEGEGLSILGYRNVPVNKDAIAKHVADTMPVIQQVFIDIRDIEDVEKR
                     LFLARKQLEFYSTQCDLELYFTSLSRKTIVYKGWLRSDQIKKLYTDLSDDLYQSKLGL
                     VHSRFSTNTFPSWKRAHPNRMLMHNGEINTIKGNVNWMRARQHKLIETLFGEDQHKVF
                     QIVDEDGSDSAIVDNALEFLSLAMEPEKAAMLLIPEPWLYNEANDANVRAFYEFYSYL
                     MEPWDGPTMISFCNGDKLGALTDRNGLRPGRYTITKDNFIVFSSEVGVVDVPESNVAF
                     KGQLNPGKLLLVDFKQNKVIENNDLKGAIAGELPYKAWIDNHKVDFDFENIQYQDSQW
                     KDETLFKLQRQFAYTKEEIHKYIQELVEGKKDPIGAMGYDAPIAVLNERPESLFNYFK
                     QLFAQVTNPPIDAYREKIVTSELSYLGGEGNLLAPDETVLDRIQLKRPVLNESHLAAI
                     DQEHFKLTYLSTVYKGDLEDALEALGREAVDAVKQGAQILVLDDSGLVDGNGFAMPML
                     LAISHVHQLLIKADLRMSTSLVAKSGETREVHHVACLLAYGANAIVPYLAQRTVEQLT
                     LTEGLQGTVVDNVKTYTDVLSEGVIKVMAKMGISTVQSYQGAQIFEAIGLSHDVIDRY
                     FTGTQSKLSGISIDQIDAENKARQQSDDNYLASGSTFQWRQQGQHHAFNPESIFLLQH
                     ACKENDYAQFKAYSEAVNKNRTDHIRHLLEFKACTPIDIDQVEPVSDIVKRFNTGAMS
                     YGSISAEAHETLAQAMNQLGGKSNSGEGGEDAKRYEVQVDGSNKVSAIKQVASGRFGV
                     TSDYLQHAKEIQIKVAQGAKPGEGGQLPGTKVYPWIAKTRGSTPGIGLISPPPHHDIY
                     SIEDLAQLIHDLKNANKDADIAVKLVSKTGVGTIASGVAKAFADKIVISGYDGGTGAS
                     PKTSIQHAGVPWEIGLAETHQTLKLNDLRSRVKLETDGKLLTGKDVAYACALGAEEFG
                     FATAPLVVLGCIMMRVCHKDTCPVGVATQNKDLRALYRGKAHHVVNFMHFIAQELREI
                     LASLGLKRVEDLVGRTDLLQRSSTLKANSKAASIDVEKLLCPFDGPNTKEIQQNHNLE
                     HGFDLTNLYEVTKPYIAEGRRYTGSFTVNNEQRDVGVITGSEISKQYGEAGLPENTIN
                     VYTNGHAGQSLAAYAPKGLMIHHTGDANDYVGKGLSGGTVIVKAPFEERQNEIIAGNV
                     SFYGATGGKAFINGSAGERFCIRNSGVDVVVEGIGDHGLEYMTGGHVINLGDVGKNFG
                     QGMSGGIAYVIPSDVETFVENNQLDTLSFTKIKHQEEKAFIKQMLEEHVSHTNSTRAI
                     HVLKHFDRIEDVVVKVIPKDYQLMMQKIHLHKSLHDNEDEAMLAAFYDNSKTIDAKHK
                     PAVVY"
     gene            33014..34477
                     /locus_tag="O6Y56_000241"
     CDS             33014..34477
                     /locus_tag="O6Y56_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HDB5573541.1"
                     /translation="MGEFKGFMKYDKQYLGELSLVDRLKHHKAYQQRFTKEDASIQGA
                     RCMDCGTPFCQTGQQYGRETIGCPIGNYIPEWNDLVYHQDFKTAYERLSETNNFPDFT
                     GRVCPAPCESACVMKINRESIAIKGIERTIIDEAFENGWVAPKVPSRRRDEKVAIVGS
                     GPAGLTAAEELNLLGYQVTIYERARESGGLLMYGIPNMKLDKDVVRRRIKLMEEAGIT
                     FINGVEVGVDIDKATLESEYDAIILCTGAQKGRDLPLEGRMGDGIHFAMDYLTEQTQL
                     LNGEIDDITITAKDKNVIIIGAGDTGADCVATALRENCKSIVQFNKYTKLPEAITFTE
                     NASWPLAMPVFKMDYAHQEYEAKFGKEPRAYGVQTMRYDVDDKGHIRGLYTQILEQGE
                     NGMVMKEGPERFWPADLVLLSIGFEGTEPTVPNAFNIKTDRNRIVADDTNYQTNNEKV
                     FAAGDARRGQSLVVWAIKEGRGVAKAVDQYLASKVCV"
     gene            34747..34839
                     /locus_tag="O6Y56_000242"
     tRNA            34747..34839
                     /locus_tag="O6Y56_000242"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:34783..34785,aa:Ser,seq:tga)
     gene            35309..36736
                     /gene="treP"
                     /locus_tag="O6Y56_000243"
     CDS             35309..36736
                     /gene="treP"
                     /locus_tag="O6Y56_000243"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system trehalose-specific EIIBC component"
                     /protein_id="HDB5573542.1"
                     /translation="MAVKREDVKAIVTAIGGKENLEAATHCVTRLRLVLKDESKVDKD
                     ALSNNALVKGQFKADHQYQIVIGPGTVDEVYKQFIDETGAQEASKDEAKQAAAQKGNP
                     VQRLIKLLGDIFIPILPAIVTAGLLMGINNLLTMKGLFGPKTLIEMYPQIADISNIIN
                     VIASTAFIFLPALIGWSSMRVFGGSPILGLVLGLILMHPQLVSQYDLAKGNIPTWNLF
                     GLEIKQLNYQGQVLPVLIAAYVLAKIEKGLNKVVHDSIKMLVVGPVALLVTGFLAFII
                     IGPVALLIGTGITSGVTFIFQHAGWLGGAIYGLLYAPLVITGLHHMFLAVDFQLMGSS
                     LGGTYLWPIVAISNICQGSAAFGAWFVYKRRKMVKEEGLALTSGISGMLGVTEPAMFG
                     VNLPLKYPFIAAISTSCVLGAIVGMNNVLGKVGVGGVPAFISIQKEFWPVYLIVTAIA
                     IVVPCILTIVMSHFSKQKAKEIVED"
     gene            36800..38440
                     /gene="treC"
                     /locus_tag="O6Y56_000244"
     CDS             36800..38440
                     /gene="treC"
                     /locus_tag="O6Y56_000244"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HDB5573543.1"
                     /translation="MSKEIDWRKSVVYQIYPKSFNDTTGNGIGDINGIIEKLDYIKLL
                     GVDYIWLTPVYESPMNDNGYDISNYLEINEDFGTMDDFEKLIKVAHQKDLKVMLDIVI
                     NHTSTEHEWFKEARKSKDNSYRDYYFFRSSEDGPPTNWHSKFGGNAWKYDSETDEYYL
                     HLFDVSQADLNWDNPEVRQSLYRIVNHWIDFGVDGFRFDVINLISKGEFKDSDKIGKE
                     FYTDGPRVHEFLHELNRQTFGNTDMMTVGEMSSTTIENCIKYTQPERQELNSVFNFHH
                     LKVDYVDGEKWTNAKLDFHKLKEILMQWQRGIYDGGGWNAIFWCNHDQPRVVSRFGDD
                     TSEEMRIQSAKMLAIALHMLQGTPYIYQGEEIGMTDPHFTSIAQYRDVESINAYHQLL
                     SEGHAEADVLAILGQKSRDNSRTPMQWSDDVNAGFTAGKPWIDISENYHQVNVRQALQ
                     NKDSIFYTYQKLIQLRHTHDIITYGDIVPRFMDHDHLFVYERHYKNQQWLVIANFSAS
                     AVDLPEGLASEGRVVIQTGTVENNTISGFGAIVIETNA"
     gene            38465..39193
                     /gene="treR"
                     /locus_tag="O6Y56_000245"
     CDS             38465..39193
                     /gene="treR"
                     /locus_tag="O6Y56_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose operon repressor"
                     /protein_id="HDB5573544.1"
                     /translation="MMKQKKFMKIYEALKEDILNGQIQYGEQIPSEHDLVQLYQSSRE
                     TVRKALDLLALDGMIQKIHGKGSLVIYQEVTEFPFSELVSFKEMQEEMGVAYLTEVVV
                     NEVVEAHEVPEVQHALNINSSESLIHIVRTRRLNQHVKIVDEDYFLKSIVSDIGNDVA
                     SDSIYDYLEKVLNLNISYSSKSITFEPFDEQAYQLFGDVSVAYSATVRSIVYLENTTP
                     FQYNISKHLANEFKFNDFSRRRIK"
     gene            39255..39524
                     /gene="ffs"
                     /locus_tag="O6Y56_000246"
     ncRNA           39255..39524
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="O6Y56_000246"
                     /product="signal recognition particle sRNA large type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01854"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01854"
     gene            39594..39694
                     /locus_tag="O6Y56_000247"
                     /pseudo
     CDS             39594..39694
                     /locus_tag="O6Y56_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499023.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            39833..40357
                     /locus_tag="O6Y56_000248"
     CDS             39833..40357
                     /locus_tag="O6Y56_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDB5573545.1"
                     /translation="MQIYLSTLTELDYDKSLNSIEESFDDNPETSWQARAKVKHLRKS
                     PCYNFELEVIAKNENNDVVGHVLLIEVEMNSDDKTYYGLAIASLSVHPELRGQKLGRG
                     LVQAVEERAKAQEYSTVVVDHCFDYFEKLGYQNAAEHDIKLESGDAPLLVKYLWDNLT
                     DAPHGIVKFPEHFY"
     gene            40426..42123
                     /gene="dnaX"
                     /locus_tag="O6Y56_000249"
     CDS             40426..42123
                     /gene="dnaX"
                     /locus_tag="O6Y56_000249"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDB5573546.1"
                     /translation="MNYQALYRMYRPQSFEDVVGQEHVTKTLRNAISKEKQSHAYIFS
                     GPRGTGKTSIAKVFAKAINCLNSTDGEPCNECHICKGITQGTNSDVIEIDAASNNGVD
                     EIRNIRDKVKYAPSESKYKVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPH
                     KIPPTIISRAQRFDFKAISLDQIVERLKFVADAQQIECGDEALAFIAKASEGGMRDAL
                     SIMDQAIAFGDGTLTLQDALNVTGSVHDEALDHLFDDIVQGDVQASFKKYHQFITEGK
                     EVNRLINDMIYFVRDTIMNKTSEKDTEYRALMNLELDMLYQMIDLINDTLVSIRFSVN
                     QNVHFEVLLVKLAEQIKGQPQVIANVAEPAQIASSPNTDVLLQRMEQLEQELKTLKAQ
                     GVSVAPAQKSSKKPARGIQKSKNAFSMQQIAKVLDKANKADIKLLKDHWQEVIDHAKN
                     NDKKSLVSLLQNSEPVAASEDHVLVKFEEEIHCEIVNKDDEKRSSIESVVCNIVNKNV
                     KVVGVPSDQWQRVRTEYLQNRKNEGDDMPKQQAQQTDIAQKAKDLFGEETVHVIDEE"
     gene            42213..42530
                     /locus_tag="O6Y56_000250"
     CDS             42213..42530
                     /locus_tag="O6Y56_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002479279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDB5573547.1"
                     /translation="MRGGGNMQQMMKQMQKMQKKMAQEQEKLKEERIVGTAGGGMVAV
                     TVTGHKEVVDVEIKEEAVDPDDIEMLQDLVLAATNEAMNKADELTQERLGKHTQGLNI
                     PGM"
     gene            42537..43133
                     /gene="recR"
                     /locus_tag="O6Y56_000251"
     CDS             42537..43133
                     /gene="recR"
                     /locus_tag="O6Y56_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009383386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDB5573548.1"
                     /translation="MHYPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFA
                     KALVDVKRELTYCSVCGHITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKG
                     LYHVLHGSISPMDGIGPEDINIPSLIERLKNDEVSELILAMNPNLEGESTAMYISRLV
                     KPIGIKVTRLAQGLSVGGDLEYADEVTLSKAIAGRTEM"
     gene            43341..43437
                     /locus_tag="O6Y56_000252"
                     /pseudo
     CDS             43341..43437
                     /locus_tag="O6Y56_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499028.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT        15042 a         6226 c         8956 g        13643 t
ORIGIN      
        1 caaagaagga tatcgtgatg gggaatttaa aaagggcgat aaagggatgt ggacgatata
       61 tacagatttt gctaaaagca ataaatcaga cgaattggat gatgaaggta tggttttaaa
      121 tctggataga aatactcgaa cggctaaggg atattatttt gttaagaaat tttatgaaaa
      181 ggataaattt tcagatagaa aaaattataa agttgaaatg aaaaacaata aaattagttt
      241 attagacaag gtaaacgatc caaaccttaa agaaagaata gaaaatttta agttttttgg
      301 acaatatgca aattttaagg atttggaaaa ttacaacaat ggcgacgtgt caataaattg
      361 gaatgttcca agttatgacg tggaatataa aatgagcaat aaagatgaaa atgttaagca
      421 attaagaagt cgttataaca ttcctactga taaagctcca atgttaaaaa tgcatattga
      481 cggggactta aaaggtagtt ctgttggata taaaaggtta gaaatagact tttcaaaaga
      541 agatagggat atttcagtca ttgattattt aagttataag ccagcgaaaa aatagtattg
      601 ataattaaat attagggtgt gaaatgatga gatatttaaa aagagttgta ctgtacataa
      661 ttgttatggt tttgagtgtt tttataatag gttgtgataa atcaagcgat acttcagaaa
      721 agccaaaaga agattcaaaa gaagcacaaa ttaaaaagag ttttgcgaaa acgttagata
      781 tgtaccctac tgaaaatcta gaagactttt atgacaaaga gggatatcga gatggagaat
      841 ttaaaaaaga tgataaaggt acttggctaa ttagatctga aatagttaaa cagccaaagg
      901 gcaaagtgat gaaaacaaga ggtatgcaat tatatattaa tagaaatacc aaaacagcca
      961 aaggtttctt tgttttgaaa gaaataagtg aaaaaaacaa tcatgtaaat aaagataagg
     1021 aggaaaaata cgaagtgaaa atggtaggga ataaaattat tcctactgaa caaattaatg
     1081 atgaaaaaat aaaaaaagaa attgaaaact tcaagttttt tgttcaatat ggaaatttta
     1141 aaaatttcga aaaatacaac aatggtgagt tttcatataa tccagaagca ccaatttatt
     1201 ctgctaaata tcaattgcaa aatgacgatt aaaatgtaag gcaactacgt aaaagatatg
     1261 agatttcaac aaaagaagca ccgaagttac ttttgaaagg tggaggagat ttaaaagatt
     1321 cctcagttgg tcaaaacgat attgaattta cttttgttga aagaaaaggt gagaatattt
     1381 attttaacga tagtgttgaa ttcataccaa gtaagtaaag ttaaattaca atgtgtggtt
     1441 tgatgaaatg atcaaatatc aaaaaatgtg caaagagatg tgacaagatg aagtgttttc
     1501 agaaattata catatttata ttaattttaa tcgtattaat ggcaggatgc gaaagtaata
     1561 agatcactgg agattcgaaa gaaacacaga tcaaaaagag ctttgtgaaa acattagatg
     1621 tataccctac gaaaaatcta gaagattttt atgacaaaga aggatatcga gatggcgaat
     1681 ttaaaaaggg tgacaaaggt acatgggtta ttagatctga aatgacaaca gaactgaaaa
     1741 atgaaaatat ggtatccaaa ggtatggtca tacgtttaaa tagaaatagt agaatatgca
     1801 ctggtgaata ttttgtaagg atagttaaag aagacagtga gggcaaggta tatagtgatg
     1861 aacgaaaata tccagtcaaa attgaaaata ataaaatcat tccattaaaa ccaattgatg
     1921 atgaaaaagt aaaaaaagaa attgaagaat ttaaattctt tgtacaatac gggaatttca
     1981 aagaattgga aaactataaa gacggagaag tgacatataa cccagaagca ccaatatact
     2041 ctgcacaata tcaattgaaa aatagtgatt ataatgtaga acaactacgt aagcgatata
     2101 atataccgac gaaaaaggcg cctaaattat tattgaaggg ttcaggtaat ttaaaaggct
     2161 catcagttgg atataaaaat attgaattta cctttgttga aaataagaaa gaaaacattt
     2221 acttcacaga tagtgtctac tttaatccaa gcgaggataa atataattac taatataaaa
     2281 aataacgtta gaacatttaa taataaagtt aaatgaatta catgtattaa attgaataag
     2341 ttagttttgt ttgataacat aaaagtgtaa taatcactat tttattaagt tgtatgaaat
     2401 attcaaatgt ttataaaatt aaagcagaga gatgtgaaat gatggagtat ataaaaaaaa
     2461 ttgctttgta catgagtgta ttacttttaa tcatttttat tgggggatgt ggaaatatga
     2521 aagatgaaca gaaaaaagaa gcacaaacaa ataaaacaaa ttcaaaagaa gagcaaatca
     2581 aaaagagttt tgcgaaaacg ttagatatgt atccaattaa gaatctcgag gatttatatg
     2641 acaaagaagg atatcgtgat ggcgagttta aaaaggacga caagggtaca tggacgatat
     2701 attcagactt tgctaaaagt aaaaaagtag gtgaattgga tagtgaaggc atggtactac
     2761 atttgaatag aaatacacgg acagctaaag gatattattt tgtaagaaaa acttacgatg
     2821 aagaggataa gatgccgcaa aggaaagatt atcgtgttga gcttaaaaat aataaaatag
     2881 tccttttaga taaagtagaa gatgaagagc ttaaacataa aatagaaaat tttaaatttt
     2941 ttggacaata tgcagatttt aaagacttga aaaattatca aaatgggaaa atatcgagca
     3001 atgaaaatgt gccattttat gaagcagagt acaaaatgga aaatagtgat agtaatgtaa
     3061 aaaaacttag agatgtttat cctattacaa ccagtgaatc gccaacttta aaatttcata
     3121 tagatgggga tataaaaggt agctcggtag gatataaaaa agtggaatat atcttttcaa
     3181 ggcaaaaaga taaccaaatt tctgtcagtg actttttaaa ttataaccct tcgaaggggg
     3241 aaaacaatga gtaataaatt tcgcttagac catagtctta taaataataa gactgagaca
     3301 actagtgcag tttctaaatt atcatatgaa attgaaaatg ctaatcttaa tggattgcca
     3361 aaaaataatt tacaaatgca gtttgataga ttaaaagtaa ctaatgaatt cccttcaaat
     3421 cttgaatata tagatagtca cacagataaa aagtacggtg tgacagcatc agctttccta
     3481 aacaaagata ctgggaaagt aattattggc atgactggta caaatttcaa aaaggatgcc
     3541 cttgcgaagc gatattcggg aaacggagac aaacaagata aaatagactc agatgagact
     3601 gaaaaggatt taatttccga tttcgaaatt ggaatatctc ctccgtctga taaaagcaaa
     3661 cattatgaag aaacacaaga gttcatcaaa aaaataaaaa ataagtatga cattgatttt
     3721 attactgggc attcactagg tggtagagaa gcggtaatat taggaatgag taatggtatt
     3781 ccgaatattg ttgtttataa tccagctcct atttctatat ttaatttgaa ccctaattcc
     3841 ccggaaggaa aacgtttatt agaattatat aagaattata aaggtaatat tactaggttt
     3901 gttgcagaaa atgatgaatt gacagaaaat ctgaagaaat ataagcattt tatgtttttt
     3961 ggtaatgata tagttcttaa gaatggtaaa ggtcattcaa tggatggatt cttaactgaa
     4021 caagaacaaa aagccattaa aaaagaactt aaaaaagtac aaggttatgt agaagaaaat
     4081 aataagtcgt tcgtaaaaaa ttccaataat gctatgtcta aattagctag tatagaatta
     4141 cttagagcca atatgatgac tacaaatggt ggttggttat cttcttcaca acagaaagtt
     4201 ttagaaagtt taacagcttt aacaattgca cagtcattca atcaactgat agaggatgaa
     4261 attaatcaaa tcaaaaaaat gtataatgaa aagaaaaaga aatttgaaaa aaattgggaa
     4321 gacgcgcaaa aagctgggaa cgctgtaggt aaagatttaa ccgtgagtga agtgctagaa
     4381 gctttaaatg aaggtcaagt gaatgaaagt agtatggtag gagatcctga acaaatgata
     4441 tctctaaatg aaaggcaact ttcaacgata gggtcttcta tatcaaatta tattctaaga
     4501 gttagattta gtattaatga aatcgttgat aaagatcaag tgcttgcatc tcaaataggt
     4561 ggattactat gatgtttaat caaattaata ataaaaatga attagaagaa tcatataatt
     4621 ctgagaaaaa acgtatagag aatgaactgc aaaatttgaa tgaacttagg catagagctc
     4681 gaaaagaaaa tgaacgtagt tatgatgttt ttcaatattt gaaacgcgaa atgaattata
     4741 gtgaagatgc acaaaggaaa atgacgagaa atatagaagc gtatgagcaa gaaatcaatg
     4801 agataattag aaagcaagaa tggaaattag aagaatataa agaagactta aaaaaatctt
     4861 atgaaaacca gttagataaa ctaagtgatt gataatttgg aggagattat atgagtccaa
     4921 tgataggacc agttatagga ccggatatag taccggacat agaaccgact atagtaccag
     4981 acataggacc ggatatttcg ttaaggaaaa aagatgctca aaaaaaacat tcgcacagtt
     5041 attgcacctg aacataagca taaatacaaa gatattgaaa acggattaaa aggtgaagaa
     5101 aaagtattaa ttaaacaaat ggcgcaacat tgcgaagctt ttaaagctaa ttttaagggc
     5161 gcagctcaag gagagtgggt taaaagtgcc atgtctgaga tagacagtat taaggatgat
     5221 ttgaaaaaaa ttaatagcta aactacatat catactacta aataaagcga ccaatgttca
     5281 gtatattcac aactgacact aggccgcttc tttttaattt attcccatgt aaagtgattc
     5341 gaaccgaatc gaaatatcac actcacaatt gtaaaaacac aacttaaatt actgtcccgc
     5401 attaaacata tccacattcc aaacagcaac aacaaaatcc tcaagtacca aaagctatga
     5461 tcactttatc aaaatcaacg caagttaacc tctctggaac tacccgccat aaatcatctt
     5521 caccttacaa accataaagc gctgcagtta agtattgaat ggcatagcca attgaaatga
     5581 aaatagcaat cgttataatg gcactaccaa ttgtatataa agtatgtttc gtagataaac
     5641 cttccgtctt agaaccaaaa acacttagta gaataaatgc aatgccaatg acatataaaa
     5701 ctaaaatgac aaataacatg tttatacacc tcgattctct ttcgtgagat atatctttgt
     5761 ctccattata aagtaaagcg ctcaataatt taattaagta tactattttt ttattatcga
     5821 agattgcgaa agaggaaatg ctcctatata atgtaaaacg gaattattcc tatttgcaaa
     5881 tgaacgaaac aaataaattg aagtgagggt atatatatgg ctaaaattcc agttacggta
     5941 ttaagtggtt atttaggctc ggggaagaca acgttgttaa atcatatttt acaaaatcgt
     6001 gaaggtcgac gtatcgcagt aattgtaaat gatatgagtg aagttaatat cgataaagat
     6061 cttgtcgcag atggtggggg actgtcgcgt acagatgaaa aattagtcga actttctaat
     6121 ggttgtatct gttgtacact tagagacgat ttattaaaag aagttgagcg tttagtgaaa
     6181 aaaggtggca tcgatcaaat tgttattgag tcaacaggga tttcagagcc agtacctgtt
     6241 gcacaaactt tctcatatat tgatgatgaa cttggcattg atcttacagc gatttgccgt
     6301 ttagatacaa tggttacagt tgtggatgct aaccgcttcg tacatgacat taactcagaa
     6361 gatttattga tggatcgtga tcaaagcgtt gatgaaacag atgaacgttc gattgctgat
     6421 ttattaattg accaagttga attttgtgat gtattgatta ttaataaaat agatttaatt
     6481 agtgaagaag aacttgcgaa gttagaaaaa gtgttaagtg cattgcaacc gactgctaaa
     6541 atcattaaga caacaaattc tgaagtagat ttaaaagaag ttttaaatac gcagcgtttt
     6601 gattttgaaa aagcgagcga gtcagcagga tggatcaaag aacttgagtc tggtgggcat
     6661 gcatcgcata cacctgaaac agaagaatat ggtatatcat cgtttgtata taaacgtcgt
     6721 ctacctttcc atgctaaaag gttcaatgat tggttagaaa gcatgccaaa taatgtcgtt
     6781 cgatcaaaag gtatcgtatg gctagcacaa tacaatcatg tagcatgtct attatctcaa
     6841 gcaggatcat cttgcaatat tcatccagtt acatattggg tggctagtat gtctgaagcg
     6901 caacaaacac aaatattagc agaacgtcaa gatgtcgcag ctgaatggga tccagaatat
     6961 ggcgatcgtc atacacaatt tgtcattatt ggtaccgact tagatgaaga aaaattaaca
     7021 aaagaactcg atgcatgctt agtcaatgcg caagaaattg atgcagattg gcaacaattt
     7081 gaagatccat atcaatggca aattagacca gcacgctaag ttgaatgaag tgtaatcatt
     7141 tttaaattgt ggcttaattg tttgcaattt atgacaatta ataaaaagtt aagatgttct
     7201 taggatcttt ttgttttcaa tctatctaaa gtgtgatagt tttgataaag cagaaatttg
     7261 cattttatcc atagggctag gacatgtatg tgtcttagtc ctttttatat ttgcgttgat
     7321 gaaaaatgat aaaaccatcg taccaactgt taattgaaag tacaattatt gtttaacggt
     7381 cataaaaatg agtgaagtaa ttgcagctat caatgtacta ttactgctta cggtcacacg
     7441 agtgtttcag actaaacgtg caacgaaatt ctgcacgcgg ccaatatatc ttgcgctaga
     7501 tcaagaagat cattaagatt tagcacgcca aatcatgaat ttctcagacc tcgagtatca
     7561 aacataaaac acgccacaaa aatataacgc gtcagactac aaagatcacg aatattctgt
     7621 acgtcccact aagaacatcc tatacaaaaa ataccaagac catttatttg caacaaatta
     7681 cccagactca cctcatatca ataaatcaac acaaagcaaa gccaccatcc ctattggtat
     7741 agtggcctga gaattttaag tattcaattc gcttaaatta ttttgcgaaa atgtcgataa
     7801 ttgctttgat gattttaatg atagtaccta caatagccat cgttttgtcc tcctgtatgt
     7861 tgatttaaca tagtgatgag ttgttgatcg ttaatgtttg agatttagtt gttacctaaa
     7921 aatttaccaa gtaaatcttt aaagaatttg aataattttg ctacgaattc catgtgaatg
     7981 gcccccttca aataagatgt tcatatctat gatattttta taacttactt accagtgaat
     8041 ttctcaatta atcctttaat gaatttaatg attcctgcaa tgatacccat gtgaaagacc
     8101 tcctttgttt gttatgaaaa cttatttacc agtgaattgt tcgattaagc ttttgataac
     8161 tttaatgatg ccagcgatga tacccattaa gattacctcc tttgcttatg agttaacttc
     8221 attgtacata gttatcttgt gcgtaattga tttttttcct aacttgaatt gttatgatca
     8281 taactgcgaa ttttttattt taaaaggacg ggaaatactg cctaactgta caggtgcatt
     8341 tacaaaatct ttacaatcat tggtttaata gaggttaagc tcatgaattt gacatgaagc
     8401 agaaatttaa ttatatttta tgttataagt ttaaaacgaa taacacgtta ggtctcgtct
     8461 aggcaaggca ttggatcatg atgaattgaa cagacagaag taacatttta tatacacatg
     8521 tgcatgggag cacgcttaaa gagaacagtg taacaaggta tatcaacata ccatggtgca
     8581 gtgtctagtt aaactgaaac ctgcaatagt aaattttctg ccattatgta cagaatctac
     8641 tattgtaggt ttttattttt atacataagc attatgcgag agattagaaa taaggaggtt
     8701 atgcagtgtt aagttttcaa ttgctatttt cactgtttgt tattgcgctt atcattgcat
     8761 tgataagtgg cttgttgttt ttagcaccag ttatgccaat gagatatatt aaattacatt
     8821 tatacatact agtcatgcca gtcttatttg cagtaattgg ctttttcggt attcatggtc
     8881 aacatgtctt aggtccattt aaaatagatc gtttatcttg gttattagct ggctttgtaa
     8941 tggcgcttgg ctttattatt caaaagtttt caatgcgata tttactaggt gatcatcatt
     9001 atagacatta ctttccattg ttcactgcga ttacgtcgtt tgcatcttta gcatggatgt
     9061 ctgaagactt aagattgatg gcactctgct ggggtatgac attattatgt ttaacattgc
     9121 tgatgaacgt taatcgtttt tggaaagtgc cacgtgagtc tgcgaaatta tcgagcatga
     9181 catttttatg tggttggctt gcattcgttg gagcaattgt atctatttat attgcaactg
     9241 gcgagtggcg ggtatcacaa catatagcgc atccgacatg gtcattgttg acgaatgtac
     9301 tacttgtatt agctgtcatg ataccggcag cacaatttcc ttttcatcga tggttgattg
     9361 aatctgtaac agcaccaacg ccagtatcgg caattatgca tgcaggaatt gtgaatgcag
     9421 gtggtgttat tctaactcgt tttgcgccga tatttgataa tggatttgcg atatcattat
     9481 tacttatcct ttctagtatt tcggtattgt taggatcagg cataagtttg gttcaagttg
     9541 actataaacg ccaattagtg ggctctacga tgagtcaaat gggctttatg ttagttcaat
     9601 gcgcattggg cgtatattca gcagcgatta ttcatttaat attgcacggt atttttaaag
     9661 caacattatt tttacaatca ggttctatcg tgaagcgatt caatattcca aaacaagcat
     9721 ctgctaaaga cgcttatggc tggattgtca tgggacgtgt attagctatt atcgtggcat
     9781 ttctgttttg gatgagtagt gacagaagtg catatgaagt gttaagtgca ctcattctag
     9841 catggtcatt acttgtatct tggaatcaaa tggtagcctt tagtaaaggg cgtatggcac
     9901 gtctggttgg catgattttg atttcaattg tgacatttat ctacatcatc acacataatt
     9961 atttttacga tgtattacaa aatataacaa cacatgcgac aacaccgcct acaattagtg
    10021 tcatcattag tgttgtcatt ttaatctttg gtagtttatt aagtatctgg gtggcgcgtc
    10081 atcgatactc taaggctttt gcggtattgt acgtgtggtt agttaatcta ggtgaagcac
    10141 gctcgaaagc gatagaaagt catccgaatt atttgaagaa gtatttatag gaggtgaaag
    10201 gtatgacaac acagttaaat atcaattcag tcattgaaaa tgcgaaacgt gttattacac
    10261 cattatcacc gatttcgatt tttgcagcac gaaatccatg ggaaggatta gaagcggata
    10321 catttgaaga tgtcgcaaaa tggttacgtg atgttcgaga tgtggatatt ttcccaaata
    10381 aagcattaat agaaagtgct gtggcacgtg gtgaattaga cgaaagtgtc tttaatcaac
    10441 ttgttactga tatgttactt gaacatcact acaatatccc gcaacactac atcaatcttt
    10501 atattgataa cattaaaaca ttaaaagacg tacctgcatc atatatgaat cattcaaatg
    10561 ttgatgttgt tgctgatcta ctattagaaa aatcaaaacg tgatatggct gaatcatatc
    10621 atcactatga tgtacgtccg atgagtgatg caataataga tgaacaaggt gagccactta
    10681 gcgaacaagt gaatcgtcaa atgattaaat ggacgaaact ttatatcgac caatttttat
    10741 cgagttggac aatgccgaag cgtgaacaaa gtttttacca tgcatggttg catttagcgc
    10801 aacatgacca tagttttact aaagcacagc gccaagtgat taaagactta cccaatgatc
    10861 ctaaaatgac gatagagtca gtattaaatc atttttcaat agcgcaggaa gactaccagg
    10921 cttatgttga aggacatctt ttggcgttac cgggttgggc aggtatgtta tactaccgct
    10981 cacaacagca tcactttgaa caacatttgt taacggatta tttgaccatt cggttagttg
    11041 tcgaacaatt gctagttggt gatgagttta agtcagtcac taaagattgt gaaagtagat
    11101 cggaaaattg gtttaagcaa actgttgcat catggtgtta ctacagtgat atgcctagcg
    11161 atgtattact acaacatgac gtcaatgaaa ttcaaacgtt tattcatttt gcagcaacta
    11221 tgaataaaaa tgtatttaaa aatttatggt tgattgcctg ggaaatgaca tacgaatctc
    11281 agttaaaaca aaaaattaaa gcaggtcatg aaagtttggc gggcgtatta gatgtaaacc
    11341 aagtaaatgt tactgaaaat gacaacgcta atcagtcaca ttcagtatcg ttaaatgata
    11401 cacaagcagt tgatgaaaat aatagcgagc taaatcaggt gggcacatca acgaaagcgc
    11461 aaattgcatt ttgtatagat gttcgttcag aaccatttcg tagacatatc gaagcagcag
    11521 gtccatttga aacgattggt attgcaggtt tctttggatt acctattcaa aaagatgccg
    11581 tagacgaaca attcaaacat gattcattac ctgtcatggt accgccggca tatcgcatta
    11641 aagagtttgc agaccgttac gatatgaatg tttatcgaca acagcaacag acaatgtcat
    11701 cgatgtttta cacatttaaa ttgatgaaaa ataatgtcat gcctagtctg ttattgcctg
    11761 aattaagtgg gccattttta agcttgagta ccattgtcaa tacgattatg cctagaaaaa
    11821 gtcgcgcgtc tttacagaaa ataaaacaaa aatggttgaa gaaacctgaa acaaagttaa
    11881 cgattgatcg tgagtttgac agaacatcag acttacctgt tggatttact gagcaagagc
    11941 aaattgattt cgcgttacaa gcgttgaaat tgatggattt aaccgaagca tttgcgccgt
    12001 tcgttgtgtt agcaggtcat gctagtcatt ctcacaataa tccacatcat gcatcactcg
    12061 aatgtggggc ttgtggtggt gcatcaagcg gttttaatgc taagttatta gcgatgattt
    12121 gtaatcgtcc aaatgtcaga caaggattaa aacaagcagg tgtgtatatt ccagagacaa
    12181 ctgtttttgc ggcagcagaa catcatacgt ctactgatac gttggcatgg gtatatgtgc
    12241 cagacacatt atcagcttta gctctagatg catatgaatc attgaatgac gctatgccga
    12301 tgatttctga acacgcgaat cgcgaacgtt tggacaaact gccaacgatt ggtcgtgtga
    12361 atcatccagt ggaagaagcg cagcggtttg cgagtgattg gagtgaagta cgtccagaat
    12421 ggggcttggg taaaaatgca tcatttataa ttggacgacg ccaattaaca aaaggcattg
    12481 atttagaagg gcggacattt ttacacaatt atgattggcg taaagataaa gatggcacat
    12541 tgttaaatac catcatttct ggtccggcac ttgtggcaca atggattaat ttacaatatt
    12601 atgcgtcgac agttgcgccg catttttacg gcagtgggaa taaagcgaca caaaccgtca
    12661 cgtcaggtgt tggtgtcatg caaggtaatg cgagtgatct gatgtatggc ttatcatggc
    12721 aatctgttat ggctgctgat cgaacgatgt atcattcccc tattcgttta cttgtcgtta
    12781 ttcaggcacc cgactatgtt gtagctagac tactcgcgaa taatgagcat ttcgctagga
    12841 aggtgtctaa tcattggctg cgtttaatga gtgttaatga ggaagggcgt tttaaaagtt
    12901 ggatttaacg atgaaatgtt gcgatgctaa gtaactaata tatcatcata tctacaatgt
    12961 tctagcttct taaaatatac taaaaatgat aaacttaatg taatagttga tgtcgtgata
    13021 acgatacaaa gatgaagtaa tcaattttaa tattattgga gttagtgata tgaaaagaac
    13081 gaaaggtgaa atcgaagctg aaatcagtaa agccattacg caatgggaaa aagatttcct
    13141 tggcagaggt tccttgtcgg ttaaatcaga cattttaaga gatatggtga ttattagttt
    13201 gcaaggtatc ttaacgccag cagaatatcg tgtgtgtagt acgaatgaag gattattaaa
    13261 tattaaacga acacgttctg aattagttga atccggtgag caagatttga atgatatcat
    13321 ttttaaaatt acaggtatca aagtgatgag cttccatagt gatttaagta cagttacagg
    13381 tgaacgtatt atcgtattca aacttgagga taatttggaa aagcatattt aagaaggtta
    13441 ggtatgcttc tgcaggctta ttaaagctat agaagtatgc tcggttaaac agcgcaacgc
    13501 catatatttg ggtgtgctgt ttttctatta tatgatgtgt ttatcatctg gaagaatatg
    13561 tggctctgaa tatagcccgt gaaaggcgta tggcataaaa tttgcgaatg gtgacaagtc
    13621 aacgcaagca tatttgttgc gagactgccc actatccttt tacataaaga gtatatgtgt
    13681 gacgtaggca tataatcgat aaagtatacc taaaaaatta ggtataataa ccattgttgc
    13741 aataagtttt tcggccttga aaccgataac gcatagtata ataggaataa aatataatac
    13801 aaatatccag taaatcaaat ttgaaaacga tggatgtata ggggtaaaga atctaactaa
    13861 tgtaatgatt aacgctatat agacaaaaat tactctattg atacgcctta ccccctctgt
    13921 ataataaata tagatcgtac taaattgaaa atagcaaaat attgttattt caattataca
    13981 atgttttatt tgcaatatac ataacaatat gaactttata attttgatat tgtcggtaaa
    14041 gtgaaatttg tggcacattg atattatgga taacatttgt aaaatgaaaa tgatgatacg
    14101 aggagattgt aagatgatag ataaaaaatt aacatcaccg aaaatgacag tgcctttatt
    14161 tttaatcgcg ctgattgtat ttataggtat gttttacagt gtagtgacaa gccaagaatg
    14221 gcttaaaaat ttagatatgg gatcattaac atggtttaca gattatttcg gtgagccaca
    14281 acgtcagtat gttaacaatt tgtttaatta ctatatgacg tttagtgcgg aaattggaga
    14341 tgtcaaaggt gtcgtgttga tttccattat cgtcacaatc atactgttta ttaaacagag
    14401 gcatttagcg gtttggtttg tgacatattt ggtttcaggt gtcatcatga acaaattaat
    14461 taaagatact gttttacgtc caagaccata taatcattta gccgttgata caggcttttc
    14521 atttccgagt ggacattcta acgccagcac attattatat ttcgccttaa tgatcattat
    14581 tatttcagtt gctgctaaga caataacaaa agtgttgagt gcgctggtta tggggatatt
    14641 atggcttagc atattatttt gtcgccttta ttttcatgcg cattactttt cagatgttat
    14701 tggcggcacg tcactagcaa tcatttgggt agcgttattc ttaatggtat acccatactt
    14761 tattaatcat cgacgacaac gcgtttagca aacatcttta gacatagtgg aggtatatag
    14821 aaaaatgaga attaaaacac cgagtccatc ttatttaaaa ggcacaaatg gacatgcgat
    14881 attattatta cattcattta caggtacaaa tcgggatgtg aagcatcttg cagctgagtt
    14941 aaatgaccaa ggatttagtt gttatgcacc gaattatcca ggtcatggtt tattgttgaa
    15001 agatttcatg acatataatg tagatgattg gtgggaagaa gttgagaaag cttaccaatt
    15061 tttagtcaat gaaggttatg aatctatcag tgcaactggt gtgtctttag gtggattaat
    15121 gacattaaaa ttggcgcaac actacccgtt gaaacgtatc gctgtcatgt cagcaccaaa
    15181 ggaaaagagt gataatggct taatagaaca tttagtttat tatagtcaac gcatgtcgaa
    15241 tattttaaat ttagatcagc aagcatcgag tgcgcaatta gcagcaattg atgattatga
    15301 aggtgaaatt acgaagtttc aacattttat tgatgatatc atgacaaatt taaatgttat
    15361 taaaatgcca gctaatatat tatttggtgg taaagatgcg ccatcctatg aaacaagtgc
    15421 acactttatt tatgaacatt taggatcagt agacaaagaa ttaaatggtc tgaaggattc
    15481 gcatcattta atgacacatg gagaaggcag agatatttta gaagaaaatg tcattcgctt
    15541 tttcaatgct ttaacataat tgaagatttt aaaaattaac acttgagtga cgatgttatt
    15601 atatttgtca tttgagtgtt ttttgtggcg tgatagtata gggaacttag ctaaagttaa
    15661 tttgtagtgt gatgtcgtgg aaattttatg ggcattgtac ctgaagttga tttgtattgt
    15721 aatgtcgtgg gaatgttatg ggcattgtac ctgaagttgt tatgtggcga gatgttggcg
    15781 cacgtataca gcgttgaacc agaaatttta atgtagtgta atgacaacac attacaagtg
    15841 atttactata ttattataaa cccaggtgct accgtattaa tgaaacaatt ttgatgcagg
    15901 tgtattgcat gttatttaca tacatgttag agtgttactt aaacacgtag acgctttaac
    15961 gctttaaagg agatgtgaat gatgaaaaga caacaatcac aatggaagtc atcaactgga
    16021 tttattttag ctagtgcggg ttctgcaatc ggtcttggtg ccatgtggaa attcccatat
    16081 atggcaggga tctatggcgg cggtgccttt ctagctatgt tcttaatatt caccattttt
    16141 gttgggttac cattactcat tatggaattc actgttggga aaatgggacg gacgtataca
    16201 acacaaatat atagtaaatt aactggcaag aaatggctca atatcattgg ctggaacggt
    16261 aatttggcag tgtttatttt atttggcttc tatagtgtta tcggtggttg gattgtcatt
    16321 tacatcggac aagtattatg gcaattagtt atatttcaac gcatcaatca tctccaagaa
    16381 atgaattttg aagcggtaat atcaaatcct tggttaaccg ttctagggca aggtatattc
    16441 atattcgcta cgatgattat tgtcatgtta ggtgttgaaa aaggattaga aaaggcatcg
    16501 aaagttatga tgccgttgct gtttgtcttt ttaatcatca ttgtgattaa gtctttaaca
    16561 ttagatggcg ccttagaagg tgtgaaattt attttacaac caagagtgtc agagattact
    16621 gctgacggta tcttgtttgc gctaggccaa tcattcttta cgttatcatt aggaactaca
    16681 ggtatgatta cttatgcgag ttatgcctct aaagacatga cgattaagtc atcagctatt
    16741 tctatcgttg ttatgaatat ctttgtatct gtattggcag gcttagctat atttccggcg
    16801 ttacatagtt ttggctatga accacaagaa gggcctggat tattatttaa agtactgcca
    16861 atggtcttta gtcaaatgca tctaggcaca ttattctatt tgggattctt agtgctgttc
    16921 ttatttgcgg ctttaacgtc atctatttct ttattagaat taaatgtttc taacttcacg
    16981 aagaatgaca atacaaaacg taaaaaagtc gcagtgatcg gtagtatttt agtatttatc
    17041 attagtattc cagcaacctt atcttttggt atcttaaaag atgtaagatt cggtgcggga
    17101 acgatttttg ataatatgga tttcatcgtt tcgaatgtat tgatgccatt aggcgcatta
    17161 ggtactacgc ttgtcgtagg acaattatta gataaaaaat tattacaaca atattttggt
    17221 aaagatcgat ttagattatt cagtggttgg tattacttaa ttaagtatgc gatgcctgtc
    17281 gttattattt tagtctttat cgtgcaatta tttagttaat atatagaagc atctgacaca
    17341 caagtatttg tgttgctcag gtgttttttt gtttggaatt gaaaagtttg tactggttct
    17401 gaattaatcg aaacttagat aattgcaaaa taacaaaatg tcgtttataa ttcttatctg
    17461 aaaagtaaga attaaaattg agacatgaag aaaggtttca ttcatttgat cggcatgtca
    17521 gatgagggtg catctatgat tacttatgat ttaattggca atacaccatt agtactgtta
    17581 gaacattata gtgatgataa agttaaaatt tatgccaagc ttgaacaatg gaatcctgga
    17641 ggcagtgtta aagacagact cgggaaatat ttagtagaga tggcaattca agaagggcgt
    17701 gtgcgtgcag gtcaaactat tgttgaagcg actgctggca atacaggcat agggttagct
    17761 attgcagcaa atagacatca tttgaaatgt aagatctttg cgccgtatgg tttttcagaa
    17821 gaaaagatta atattatgat agcgcttggt gcagatgttt caagaacgag tcagtctgaa
    17881 ggtatgcatg gggcacaatt agctgcacgt tcctatgctg aaaaatatgg tgccgtttat
    17941 atgaatcaat ttgaatccga acataatccg gatacatatt ttcatacatt gggacctgaa
    18001 ttgacttctg cattacagca aattgattat tttgtggctg gtattggctc tggtggtaca
    18061 tttacaggta ccgcacgtta tttaaagcaa catcacgtgc aatgttatgc cgttgagcca
    18121 gaagggtccg tgttaaatgg agggccagct catgcacatg acactgaagg tatcggttct
    18181 gagaaatggc cgatattttt agaaagaagt cttgtagatg ggatatttac gattaaagac
    18241 caagatgcct ttcgaaatgt caaaagtttg gcaaagcatg aaggattact ggtaggcagt
    18301 tcttcaggtg cagcattaca aggtgcattg aatttaaaag cgcaattatc tgaaggtacg
    18361 attgttgtcg tatttccaga tggtagtgat cgatatatgt ctaaggaaat atttaattat
    18421 gaggagaatg attatgaata agaaaacgaa attaattcac ggtggacaca caacggacga
    18481 ctatacaggt gcagttacaa caccaattta tcaaacaagt acatatttac aagatgatat
    18541 tggtgattta cgtcaaggat atgaatattc tcgtactgcg aatccaacaa gaagttctgt
    18601 agaaagcgtt attgcggcat tagaaaatgg caaacatggc tttgcattta gttcaggtgt
    18661 tgcagcaatc agtgcagttg ttatgctgtt ggacaaaggt gatcatatta ttttaaattc
    18721 agatgtatac ggcggtactt atcgcgcatt gacaaaagta tttacacgat ttggcattga
    18781 agtggatttt gtagatacaa cgaatacaga ttcaattgta caagcgatac gcccaacaac
    18841 aaagatgttg tttattgaaa caccttctaa tccattatta cgtgttactg acattaaaaa
    18901 gtctgctgaa attgcgaaag aacacggttt gatttcagtc gttgataaca catttatgac
    18961 accttattat cagaatccat tagatttagg catcgatatt gtcttacatt ctgcaacgaa
    19021 atatttaggt ggacatagtg atgtcgttgc tggtttagtt gcaacatcgg atgacaagct
    19081 tgcagaacgt ttagcattta tttcaaattc aacaggtggc attttaggac ctcaagatag
    19141 ctatttactt gtgaggggta ttaaaacatt aggtttacgt atggaacaaa ttaatcgcag
    19201 tgttattgaa attattaaaa tgttacaagc acatccagct gtgcaacaag tgttccatcc
    19261 aagtattgaa agtcatttaa atcatgatgt ccatatggct caagcggatg gccatacagg
    19321 tgtgattgca tttgaagtgg aagatacaga aagtgccaaa caattgatta aagcaacatc
    19381 gtattacaca ttggctgaaa gtttaggtgc agtagaaagt ttaatttcag tacctgcatt
    19441 gatgacacat gcatctattc cagcagatat tcgagctaaa gaaggtatta cggacggact
    19501 tgtaagaatt tctgtaggta ttgaagatac tgaagattta gtggatgatt taaaacaagc
    19561 actagatacg ttataaataa tagcagcact ggcatatatt ttgagttcaa cgtttgttgt
    19621 tcttgaatat gctagtgctt tttttgtgcg atgttaatat ttagtaattg cgttgtggac
    19681 gtttggtgga catttttatg gatttaattc gataaatgtc atagtagtct cacaattcat
    19741 cattatcaca tgaattgctt atttttttaa ttttttagaa aattcggcaa attgtattga
    19801 cgatatatgc aattttacat ataatgctct tattcctagt ggattaataa gaatttgtag
    19861 gaggggcgat gatgattgag tttcgacaag ttagtaaatc atatcataag aaaaagcaaa
    19921 caatagatgc tttgaaggac gtatcattta cggtcaatcg caatgatatt tttggtgtga
    19981 ttggatatag tggtgcagga aaaagtacgt tggtaagact cgtgaatcat cttgaagctg
    20041 cctcgaatgg acaagtgatt gtagatggac atgatattac gaattatagc gataaaatga
    20101 tgagggatat taagaaagat atcggtatga tatttcagca ttttaattta ctaaattcag
    20161 ctacggtatt taaaaatgta gctatgccgc tcattttaag taagaaaagc aaaacagaaa
    20221 ttaagcaacg agtaacggaa atgcttgaat ttgtaggatt gagtgataaa aaagaccaat
    20281 ttcctgatga attatctggt gggcagaagc aaagggtggc tattgcaaga gcgcttgtta
    20341 ctaatccgaa aatactccta tgcgatgaag caacaagcgc attggatcca gcaacgactg
    20401 cttcgatatt gacgttatta aagaatgtca atcaaacctt tggcattaca attatgatga
    20461 ttacacatga aatgcgcgtt attaaagaca tttgtaatcg tgttgctgta atggaaaagg
    20521 ggcaagtggt tgaaacagga actgttaaag aggtatttag tcaccctaaa acgacgattg
    20581 cacaaaattt tgtgtctaca gttatacaga ctgagccaag tacatcattg attcgtcgat
    20641 tgaatgatga acaagttggc gattttaaag attataaaat cttcgtcgag gaaactcagg
    20701 tgacacaacc gattataaat gacttgattc aaatttgtgg tagagaggtt aaaattttat
    20761 tttcatctat gtcagaaata caaggtaaca ccgtatgtta tatgtggctt cgatttaata
    20821 tggatcaaca atttgatgac acgacaataa atcaatattt caaagagaaa aatattcaat
    20881 ttgaggaggt gcattaacat atgtttggtt ctgatttaga cagtgcacag ttattacaag
    20941 cattatacga aacgctatat atggtatcta ttgctttatt tttaggagca gtgattggta
    21001 ttccattagg tgtcttattg gtaattactc gaaaacaagg catatggccc aatatagtga
    21061 tacatcaagt tttaaatcct ttaatcaata ttttaaggtc actaccattt attattttgt
    21121 taattgcgat tgtgccattc acaaaattag tagtaggtac ttcaattggt acgactgctg
    21181 ccatcgtacc tttaactgta tatgtggcac cttacattgc aagacttgtt gaaaactcat
    21241 tgttggaagt agacgagggg attattgaag cggcgaaagc gatgggcgct tcaccactac
    21301 aaatcattag atatttttta attcctgaag cgttaggttc attagtatta gcaattacca
    21361 ctgcgattat tggacttatt ggaagtacgg cgatggcagg agctgttggc ggtggtggta
    21421 taggagactt agctttagtg tatggttatc aaagatttga tacgacggtc attattatta
    21481 ccgttattgt attagtcatt attgtccaag tgattcaaac gctagggaat gtcctagcta
    21541 gattcatacg tagacattaa tgatatatag tgaatatttt gaaaggaatt gatagaatga
    21601 aaagattgat tgggttagtt atcgtagcac ttgtattatt agcagcgtgt ggtagtaaca
    21661 atgataaaaa agtaacaatt ggtgtcgcat caaatgacac taaggcttgg gagaaggtaa
    21721 aagaattagc taaaaaagat gatattgacg tggagattaa gcacttctcc gattacaatt
    21781 taccgaataa agcattaaac gatggtgata ttgatatgaa tgcattccaa cattttgcat
    21841 ttttagatca atataaaaag gcacataaag gaacaaagat ttcagcatta agtacaacag
    21901 ttttagcacc gttgggtatt tactcagata aaattaaaga tgtcaaaaag gttaaagatg
    21961 gtgctaaagt tgtcattcca aatgatgtat caaaccaagc acgtgcactt aaactattag
    22021 aagcagctgg tttaataaaa ctgaaaaaag atttcggatt agcaggtaca gtgaaagata
    22081 taacgtcaaa tccaaaacat ttaaaaatta ctgcagtaga cgcacaacaa actgcacgtg
    22141 ctttatctga tgtcgatatt gcagttatta ataatggagt cgcaactaaa gctggaaaag
    22201 atccaaaaaa tgatccgatt ttcttggaaa aatcagattc agatgctgta aagccatata
    22261 ttaatattgt tgcagttaac gacaaagact tggataacaa aacatatgct aaaatcgtag
    22321 aattgtatca ttcaaaagaa gctcaaaaag cgttgcagga agatgtcaaa gatggagaga
    22381 aacctgttaa tttatctaaa gatgagatta aggcaataga aacgtcatta gcaaaataaa
    22441 ttatattgcg tcctacaagc aaagttcatg cttatgtttg tagggcgtta ttgtttgaga
    22501 ataaaattat ttccagtaga gaaagggatt gtaatcattt tatagtgaaa tattatgaaa
    22561 ttgtaataat ttagatattg taaaatctaa taagttgtaa taattttaag ggataattat
    22621 aaaatttgat gatacagtat atgatttttt tgtaatcata atgtcatcaa acatcaacct
    22681 attatacata ataaaatcgt ataatgatgt agtattcata aattcggata aaagaatgtt
    22741 aggaaagtta agcaagagga ggattttaaa gtgcaaaaaa aagtaattgc agctattatt
    22801 gggacaagcg cgattagcgc tgttgcggca actcaagcaa atgcggctac aactcacaca
    22861 gtaaaaccgg gtgaatcagt gtgggcaatt tcaaataagt atgggatttc gattgctaaa
    22921 ttaaagtcat taaacaattt aacatctaat ctaattttcc caaaccaagt actaaaagta
    22981 tctggctcaa gtaattctac gagtaatagt agccgtccat caacgaactc aggtggcgga
    23041 tcatactaca cagtacaagc aggcgactca ttatcattaa tcgcatcaaa atatggtaca
    23101 acttaccaaa acattatgcg acttaatggt ttaaataatt tctttattta tccaggtcaa
    23161 aaattaaaag tatcaggtac tgctagctca agtaacgctg cgagcaatag tagccgtcca
    23221 tcaacgaact caggcggtgg atcatactac acagtacaag caggtgactc attgtcatta
    23281 atcgcatcaa aatatggtac aacttatcaa aaaattatga gcttaaatgg cttaaataat
    23341 ttctttattt atccgggtca aaaattgaaa gtaactggta atgcatcttc aaactcagca
    23401 tctgcaacaa ctacgaatag aggttacaat acaccagtat tcagtcatca aaacttatat
    23461 acatggggtc aatgtacata tcatgtattt aatcgtcgtg ctgaaattgg taaaggtatt
    23521 agtacttatt ggtggaatgc taataactgg gataacgcag cggcagcaga tggttacact
    23581 atcgacaata gacctactgt aggttctatc gctcaaacag atgtaggtta ctatggtcat
    23641 gttatgtttg tagaacgtgt aaataacgat ggtagtattt tagtttcaga aatgaactat
    23701 tcagctgcac caggtatttt aacttacaga acggtaccag cttaccaagt aaataattat
    23761 agatatattc actaaagtct tacgtatata aatatatata atgaattcct attacatttc
    23821 acaagctgaa aagttggatt gaatcctaaa ctttatggtg gggctatcaa agtcgtgatt
    23881 gttgtaatag gaatttttgt ataagaaaaa ggattggtcg aatgaacttc atgttctatg
    23941 ttcgaccaat ccttttctga ttcagtattc atgctttact ttgcgaatgc ttgtaaataa
    24001 tctagcaccg tttgttatta aagtaacaac tgccactgct tttttgaact tgcgtggtga
    24061 cttaattgaa atgtaaaagt ctaacacggt tcctacagtg cttaaaccta atgaaagata
    24121 tactaatttt ttatttttag catgatattt atagccattg tagccgtcga ctatgaaacc
    24181 tgcgacattt agtaaacttg ataaacgttg tgatttggaa cgttttgcca taataataat
    24241 tccccctagt atcttctgtt tatatgaaaa attgggtgcg ctgaattgct aacgttttgc
    24301 gctataacta ctcatatatg ataacataat tgtacagtat aatttgaaaa attgatttca
    24361 caaagttggg gtgtcaaaga tgattaaatg tgtctgttta gttgaagaaa cagctgataa
    24421 aatattgctt gttcaagtaa ggaatcgcga aaagtattat ttcccaggtg gtaaaataga
    24481 agaaggggaa tcacaagtac aagcgctgtt aagagaagta aaagaagaat taaatttaac
    24541 attaacaatg gatgaaattg aatatatcgg gacaattgta ggtcctgcat atccacaaca
    24601 ggatatgtta actgagttaa atggatttcg cgcattaacc aaaatcgatt gggaaaacgt
    24661 aactatcaat aatgaaatta cagatatacg ctggattgat aaagataatg atgcgttgat
    24721 tgcgcctgct gtcaaagttt ggattgaaac gtatggtggt aaacatgaca aataatgaca
    24781 ctatcatgtt acgacattat gtcccacagg attattcgat gttagaagct tttcaattaa
    24841 gtgaaagtga tttgaagttt gttaaaacgc cagaggaaaa tattacagct gcaatgtctg
    24901 ataatgaaag gtatcccatc gttgtaatgg atgacaggca atgtgtggcc ttttttacat
    24961 tacatcgtgg aaaaggggtc gcaccattta gcgataacca agatgcagta tttttcaggt
    25021 catttagtgt tgatcaacgt tatcgtaata gaggaatagg taaagtggta atggaaaaat
    25081 tggcgtcatt tatcacttca acatttcagg atattaatga gattgtgtta acggttaata
    25141 ctgacaatcc acatgccatg gcactttatc gccaacaagg atatcaatat atgggagata
    25201 gtatgttcgt cggaagacct gttcatatta tggcgctaac tataaaataa attaaattta
    25261 aaagcatctt tactcatcgt cgaccacaac aattaatgat gaataaaggt gctttttgtt
    25321 atagaccacc ggacaattta ctatagtaaa aagcgaccta gtgaacaatt gacatatatc
    25381 cacaggtcgc ttaacttaag ttatattgct agttgcgatt aattgataga ctcatcattt
    25441 ttgcgctgtc gagatggtct ttttattaaa aatgccgtaa tccaagccgt aatcggaata
    25501 ctgattgcaa cggcaatacc gcctaaaata atagaaataa attcttgggc aaatattttc
    25561 gagtttataa tatggccaaa tgaatattta agtttgaaaa accaaataaa taaagcaagt
    25621 tggccaccaa aaaaggcaag gtaaatcgtg ttcgcagatg tcgctaaaat ttctctacca
    25681 acacgcatgc cagattggaa taattcgtat tgcgtaagtg ttggattcac ttgatgcaat
    25741 tcataaatgg gtgaactaat ggtaatcgtt aaatctatca cagctgcaat aacagcaaga
    25801 ataatagtga acaccataaa ttgaaccata tcaatgccaa tattcattga atacacatat
    25861 gtttcatctt gttgttcggt tgaaaagcct tgtagatgac cgaagtagac cgataaataa
    25921 atgagtgtaa tcaacaatat tgttgtaacg atagtgctga taaatgcagc ttgtgtttta
    25981 acattgtaac tattgagtac gaataaatta caagcgccaa taataatgca gaaaaagaat
    26041 gtgacgacat aaatcggtac gccaaaaata atcaatacaa tactaataat taaaatagca
    26101 aaatttaaaa atagggttaa ataagagatg aatccctttt tacctccgaa aattatcatc
    26161 agaaagagga gcaataacgc caatataaat acagcattca ttgtttcgcc ctccttaatg
    26221 attcaaatat ttccataaac aatattgtga taggaattgt aagtacgata cctataccac
    26281 ctgttagtgc gcgcgcaatt tctaacgacc aattcatcga aatagtataa gtcactgtat
    26341 tggcattttt taaaaagatt aaaaacatag gtagtgcacc ggataaatat gagaataata
    26401 agatgttagt cattgttccc ataatatctt ggccgatgtt tcgcccagca agcgcccatc
    26461 tcctcattga aatgtgtggc gtacgctgta aaatttcatg cataccacta gcaattgtaa
    26521 ttgcaacatc cataatagcg ccaagtgaac ctattaacac tgaggctagg aagatatctt
    26581 tcggtggtaa tgataaaaaa ttcatcgttt catatttaat gcctttacca tctgtcatat
    26641 atatgattaa ttctgttaaa cctatactca aaaaagttcc gataattgta cttgctacgg
    26701 taatgagtgt acgcatatgc cagcctgtaa cgagcaataa agtgagtatt gttgaacaga
    26761 tcatggcaat ggtcatgagt aagaataaat taatattgct atgttgaata tgaatgtaaa
    26821 ttgcgattaa tatggcaata gaattcaaga ttaacgataa aatcgattgc agtccgactt
    26881 tgcgaccaac caataataca gttaataaaa acaaaccagt gatgataacc gataaggtat
    26941 cacgcttctt ttctataata taagcatcac tcggcttgtt agaaatatgt aataatactt
    27001 tttcgtgtgt gcgaaatgct tctgaatctg cttgagattt gacgtactga tgattaatcg
    27061 tcgtcgtttc tccagcaaat tgaccattta atattttgac ttttaattga tttttatact
    27121 tagtatcgcg gttattttgt gcatctttta taggtgtcga tgaaacgtgt ttgacatcta
    27181 taatttgacc aattggtttg ttgtaaaagt tctcattatt gaatgtaaat aaaatagcac
    27241 caatgaatgc gatgcagaac aaacctaaaa ttatattaaa tggctttgta aataaatttc
    27301 tatatttcaa aaacaaaacc ccaattctat gaatgaatta atatggtgat tatacgccct
    27361 taatttttta ttttcaaaga tattactgtg aagtgtaaaa cgaaaatcat cattgatagc
    27421 gtcgaattac ttaatggaat gtagacgttt tagtcattaa ttgctgaatg agtgttaata
    27481 agataccaat atcactcttc gtataaggtt ctttcgtaat agcacatatc gttcttttta
    27541 attcagtatg atctaatttt atatctatcc atgatttaga ttctggtaaa tgtatatttt
    27601 gtgatgaaat gatgtaacct tctttttgac gaaggagata ctgcgcaagt ggttggctac
    27661 tgattgtgta tacatctgat ttagtaatct tacgcaattg cttttttaca gattcggcaa
    27721 atggtgccaa gcaataaata tgactatgct caaactgaat taatggtggg tgtgtcgcca
    27781 tcgtgattgg atcgtctgaa ggcgcatata aatgatagtg ctcttcgaat aaaggtagca
    27841 tatgtaattg tttgtgttta cgtatttctg gtgtaagttc cgtgaaacca atgtctatat
    27901 tcccatttaa tacgctattt ataatcgtgt catgatctaa taagttcggt atgacatgtg
    27961 tatcattttg taaatgaaac gtttggataa gtggtagtaa catgtgggat acgtcactct
    28021 catcatagcc aatgtagata cttttatttt tagttaatcc atggctttga aattgttcaa
    28081 tcgtgctatc taaatgttca ataatacgca gagcttcatt aaataataat ttcccttcag
    28141 atgtgagcgt aatattacgt ccttgctttt taaataaaga cacattaagt tcttgttcta
    28201 ataatgtaat ttgacggctt atcgctgatt gagcaatgtt tagttcaagt gctgtttcgg
    28261 agatatgttc tcttttagcg acctcgataa aatatcttaa ttgtttaatt tccatagcga
    28321 tataggcacc tccgaaaatg agtgttttgt aactattata gcaatattat tgataaatgt
    28381 tctatttttt agatgaatat cttctatttt atatattgaa cagataaatt ttttagatta
    28441 tagtaattat cattaataac taatatcaga atattctaaa aaaaggggtg tgcatcatgc
    28501 acaatgagaa attaattaaa ggcttatatg actatcgtga ggaacatgat gcgtgtggta
    28561 ttggttttta tgcgaatatg gacaataaaa ggtctcacga catcattgat aaatcgcttg
    28621 aaatgttgcg acgtttagat cacaggggcg gggtcggcgc agatggcatc actggtgatg
    28681 gcgcaggtat tatgactgaa ataccttttg catttttcaa acaacatgta acggactttg
    28741 aaatcccagg tgaaggtgaa tatgccgtgg ggttattttt ttccaaagaa cgcgttttag
    28801 gttctgaaca tgaagcagtt tttaaaaaat attttgaagg cgaagggtta tcaattcttg
    28861 gttatcgtaa tgtaccagtt aataaagatg ccattgctaa acatgtagca gatacgatgc
    28921 cagtcattca acaagtgttt attgatatta gggacattga agatgttgaa aagcgtttgt
    28981 ttttagcgag aaaacaatta gagttctatt cgactcagtg cgatttagaa ttatatttta
    29041 cgagcttatc acgcaaaaca attgtatata aaggttggtt acgatcagac caaattaaaa
    29101 aactctatac agatttatcg gatgatttat atcaatcaaa gctagggtta gtgcattcga
    29161 gatttagtac gaatacattc ccgagttgga aaagggcaca tcctaaccgt atgttaatgc
    29221 ataatggtga gattaacacg ataaaaggta atgtgaactg gatgcgagca cgccaacata
    29281 aattaatcga aacattattt ggcgaggatc aacataaagt gtttcaaatt gtcgatgagg
    29341 atggtagtga ctctgccatt gtagataatg cgctagagtt cttatcgtta gccatggaac
    29401 cagaaaaggc agcgatgcta ctcatacctg aaccttggtt atataatgaa gcgaatgatg
    29461 caaatgtacg tgcgttttat gaattttata gttatttaat ggaaccgtgg gatggtccta
    29521 caatgatttc gttctgtaac ggtgacaaac ttggcgcgct tacagataga aatggattac
    29581 gtccaggtcg ttatacgatt actaaagata actttattgt cttttcatct gaagtgggtg
    29641 ttgtggacgt acctgaaagt aatgttgctt ttaaaggtca attgaatcct ggaaagttat
    29701 tgcttgttga ttttaaacag aataaagtca ttgaaaataa tgatttaaaa ggtgcgattg
    29761 ctggagaatt accatataaa gcgtggattg ataaccataa agttgatttt gattttgaaa
    29821 atatacaata tcaagattcg caatggaaag atgaaacgtt atttaaatta caacgtcaat
    29881 ttgcatacac gaaagaagag attcataagt atattcagga acttgtagaa ggtaagaagg
    29941 atcctatcgg tgcaatggga tatgatgcgc caattgcagt gttgaacgag cgaccagaat
    30001 cactatttaa ttactttaaa cagttgtttg cacaagttac gaatccacca attgatgcgt
    30061 atcgtgaaaa aatcgtaacg agtgaacttt cttatttagg tggcgaaggt aacttattag
    30121 cacctgacga aacggtttta gatcgaattc aattgaagag accggtattg aatgaatcac
    30181 acttagcagc gattgatcag gagcatttta aattaacata tttatcaacg gtatataaag
    30241 gggatttgga agatgcgcta gaagcattag gccgagaagc agtggatgct gtaaagcaag
    30301 gcgctcaaat tcttgtgtta gatgatagtg gattagttga tggcaatggc tttgcaatgc
    30361 cgatgttact cgcaataagt catgtgcatc aattacttat taaagcagat ttacgtatgt
    30421 ctacaagttt agtcgctaaa tctggtgaga cacgagaagt gcatcatgtt gcttgtttac
    30481 tagcatatgg cgcgaatgca attgtgccat acctagcgca acgtacagtt gaacaactga
    30541 cattgacaga agggttacaa ggcaccgttg tcgataatgt taagacatat acggatgtat
    30601 tatcggaagg tgtcattaaa gtaatggcga agatgggaat ttcgacagtg caaagttatc
    30661 aaggtgcaca aatatttgaa gcgattggct tgtctcatga tgtgattgat cgttatttta
    30721 ctggaacaca gtctaagtta tctggtattt cgattgatca aattgatgct gaaaataaag
    30781 cacgtcaaca aagtgatgat aattatcttg catcaggtag tacattccaa tggagacaac
    30841 aaggtcaaca tcatgctttt aatccggaat ctattttctt attgcagcac gcatgtaaag
    30901 aaaatgacta tgcgcaattt aaagcatact ctgaagcggt aaacaaaaat agaacagatc
    30961 acattagaca tttacttgaa tttaaagcat gtacaccgat tgacatcgac caagttgaac
    31021 cggtgagtga cattgtcaaa cgctttaata caggggcgat gagttatgga tcgatttcag
    31081 cggaagcaca tgaaacgtta gcacaagcca tgaaccaatt aggtggaaag agtaatagtg
    31141 gtgaaggtgg cgaagatgca aaacgttatg aagtacaagt tgatggaagc aacaaagtaa
    31201 gtgcgattaa acaagttgct tctggacgtt ttggtgtaac tagtgattat ttacaacatg
    31261 ccaaagaaat tcaaattaaa gttgcgcaag gtgcaaagcc tggtgaaggt ggtcaattac
    31321 ctggtactaa ggtatatccg tggattgcga agacaagagg gtcaacgcca ggtatcggtc
    31381 tgatttcacc accgccacat catgatattt attcaataga agatttagcg caactgatac
    31441 atgatttgaa aaatgcgaat aaagatgcag atatcgcggt gaaattagtt tcgaaaacag
    31501 gtgttggtac cattgcatct ggggtggcaa aagcatttgc ggataaaatt gtcatcagtg
    31561 gttacgatgg tggtacaggg gcttcaccta aaacgagtat tcagcatgcc ggtgttcctt
    31621 gggagattgg tttagcagaa acacatcaaa cattaaaact aaatgactta agaagtcgtg
    31681 ttaagttaga aacagacggt aagttattaa ctggtaaaga tgtagcgtac gcatgtgcgc
    31741 ttggagcgga agaatttgga tttgcaactg caccattagt ggtgttgggc tgtattatga
    31801 tgcgtgtatg ccataaagat acatgtccag taggagttgc aactcaaaac aaagatttac
    31861 gtgctttata tagaggtaaa gcacatcatg ttgttaattt tatgcatttt attgcacaag
    31921 aattaagaga aattttagca tctttaggtt tgaaacgtgt agaagactta gttggaagaa
    31981 ctgatttatt acaacgatca tcaacattaa aagcgaatag caaagcggct agtattgatg
    32041 ttgaaaaact gttatgtcct ttcgatgggc caaacacaaa agaaattcaa caaaatcata
    32101 atcttgagca tggatttgat ttaacaaatt tatatgaagt aacgaagcca tatattgctg
    32161 aagggcgtcg ctatacaggt agctttacag taaataatga acaacgtgat gtaggggtta
    32221 ttacaggtag tgagatttcg aaacaatatg gagaagcagg acttcctgaa aatacaatta
    32281 atgtttatac gaatggtcat gctggtcaaa gtcttgcagc atatgcaccg aaaggcttaa
    32341 tgattcatca tactggagat gcgaatgact atgttggtaa aggattatct ggtggtacgg
    32401 tcattgtcaa agcacctttt gaagaacgac aaaatgaaat tattgctggt aacgtctcat
    32461 tctatggtgc gacaggtggt aaggcattta ttaacggtag tgcaggagaa agattctgta
    32521 ttagaaatag tggtgtagat gttgtcgttg aaggtatcgg cgaccatgga ttagagtaca
    32581 tgactggtgg acatgtcatt aatttaggtg atgtaggtaa gaactttggt caaggtatga
    32641 gtggtggtat tgcttacgtt atcccgtctg atgtagaaac ttttgttgaa aataatcaac
    32701 tagatacgct ttcgtttaca aagattaaac accaagaaga aaaagcattc attaagcaaa
    32761 tgctggaaga acatgtgtca catacgaata gtacgagagc gattcatgtg ttaaaacatt
    32821 ttgatcgtat tgaagatgtc gtcgttaaag ttattcctaa agattatcaa ttaatgatgc
    32881 aaaaaattca tttgcacaaa tcattacatg acaatgaaga tgaagcgatg ttagctgcat
    32941 tttacgataa cagtaaaaca atcgacgcta aacataaacc agccgttgtg tattaaggaa
    33001 agggggagat acgatgggcg aatttaaagg atttatgaag tatgacaaac agtacttagg
    33061 tgaattatca ctggtagacc gtttgaagca tcataaagca tatcaacaac gatttactaa
    33121 agaagatgcc tctatccaag gtgcacgatg tatggattgt ggaacgccgt tttgtcaaac
    33181 cggacaacag tatggtaggg aaacaatagg ttgtccaatt ggaaactaca ttcctgaatg
    33241 gaacgactta gtgtatcatc aagattttaa aactgcttat gaacgcttaa gtgaaacaaa
    33301 taactttcct gactttacag ggcgtgtatg tcctgcacca tgtgaaagtg cttgtgtgat
    33361 gaagattaat agagaatcga ttgcgattaa aggtattgaa cgcacaatca ttgatgaagc
    33421 ttttgaaaat ggttgggtag cgccgaaagt tccgagtcgc cgtagagatg aaaaagtggc
    33481 aatcgttggg agcggtccag caggattaac tgctgctgaa gaacttaatc tactaggata
    33541 tcaagtaact atttatgaac gtgctagaga atcaggcggt ttattaatgt atggtattcc
    33601 gaatatgaaa cttgataaag atgtggttcg acgtcgtatt aagttaatgg aagaagcggg
    33661 cattactttc attaatggtg ttgaagtagg cgttgatatt gataaagcaa cgttagaatc
    33721 tgagtatgat gccattatat tatgtactgg tgcacaaaaa ggtagagatt tacctttaga
    33781 aggacgcatg ggtgatggta tacatttcgc tatggattat ttaactgaac aaacgcaact
    33841 gttaaatgga gaaattgatg atataacaat aactgcaaaa gataagaatg tcattatcat
    33901 tggtgctggt gatacagggg cagactgtgt agcgacagca ttaagagaaa attgtaaatc
    33961 gattgttcaa tttaataaat atacgaaatt gccagaagca attacgttta cagaaaatgc
    34021 atcatggcct ttagcaatgc cggtgtttaa aatggactat gcgcaccaag agtacgaagc
    34081 taagtttggt aaggaaccac gtgcatatgg tgttcaaaca atgcgttacg atgttgacga
    34141 taaaggacac atacgtggtt tgtatactca aattttagag caaggcgaaa atggtatggt
    34201 catgaaagaa ggacctgaaa gattttggcc tgctgacctt gtattattat caatcggctt
    34261 cgaaggtaca gaaccaacag taccgaatgc ttttaacatt aaaacggata gaaatcgaat
    34321 cgtggcggat gatacaaact atcaaactaa taatgaaaag gtatttgctg ctggagatgc
    34381 tagacgtggt caaagtttag ttgtatgggc gattaaagaa ggtagaggcg tagcgaaagc
    34441 agtagatcag tatttagcga gtaaagtttg tgtataatct ttgtatggaa atggtggtta
    34501 cgttgacgtt gtgtcatgct gaatcgagtt tgaaataatc tagtatctat caacgtcaca
    34561 tgccatcttt gtaacctaaa aacaaaggtt tgtaagacaa caaatagatt aattataagt
    34621 agtgattttt taagtgcgtt ttataagtca actgtagtgg aagacaatga tttgtggtaa
    34681 tcatgtaatg ctaaaaaaca atattgactt ttacagaacg ttcatatatg ataaatattg
    34741 tgtttaggag gaatacccaa gtctggctga agggatcggt cttgaaaacc gacaggggct
    34801 taacggctcg cgggggttcg aatccctctt cctccgccat caatatttat attaaatact
    34861 atatataaaa aaggtaagta ctcaaagttt gagtgtttac cttttttata tgcctttgaa
    34921 tgactcgtat ttttgataat agaaatgata aggcattgag attggaaggg catttggctt
    34981 gtgcaatata catagctaaa tgtctttttt gttttgtgaa atatgatgga tggcttgtgt
    35041 gggcaagttt gctatttgta gatatgcatt tttcaattta ggagttggcc atgcatttac
    35101 actttataat ggcgagagcg tggtgaggta ttgttaataa cacaattgta gcgaggggtt
    35161 attgctacat atgtcgttat ggctcattga ttttctgaaa tggctacctc agataattgt
    35221 gacaaaataa aaatattttg ttgaaagcct ttacataact tgtctagaca agttatactc
    35281 gttttaagac attaagggag tgaaatatat ggctgtaaaa agagaagatg taaaagccat
    35341 cgtaaccgct attgggggaa aagaaaatct tgaagctgca acgcattgtg taacacgatt
    35401 acgtttagtg ctgaaggatg aaagtaaagt tgataaagac gcattaagta ataacgcgtt
    35461 ggtcaagggg cagttcaaag cagaccatca atatcaaatt gtcattggtc caggaacagt
    35521 cgatgaagtg tataagcagt ttattgatga aacaggtgct caagaagctt cgaaagatga
    35581 agcgaaacaa gcagctgcgc aaaaagggaa tccagtacaa cgtttgatca aattattggg
    35641 ggatattttt ataccaatat tacctgcgat tgtgacagct ggtttgttaa tgggaatcaa
    35701 taatttactt acaatgaaag gtttatttgg tccaaaaaca cttattgaga tgtatccaca
    35761 aattgctgat atttcaaaca tcattaatgt gattgcgagt acggcattta ttttcttacc
    35821 agcattaatt ggttggagta gtatgcgtgt atttggtggt agtccgattc taggtttagt
    35881 cttaggtttg attttaatgc acccgcaatt agtatctcag tatgatttgg caaaagggaa
    35941 tattccgacg tggaacttat ttggcttaga gattaagcag ttgaattacc aaggtcaagt
    36001 gttgccagtt ttaattgcag cttatgttct agctaaaatt gaaaaaggat taaataaagt
    36061 cgttcacgat tcgataaaaa tgttggtcgt tggacccgta gcgcttttag ttactggatt
    36121 tttagcattt attatcattg gaccagttgc attattgatt ggtacaggta ttacatctgg
    36181 tgttacattt atattccaac atgcaggatg gcttggcgga gcaatatatg gattgttata
    36241 tgcaccactt gtaattacag gactacacca tatgttttta gcagtagatt tccaattgat
    36301 gggtagcagc ttaggtggta cgtatttatg gccaattgtt gcgatttcca atatttgtca
    36361 ggggtctgca gcatttggcg catggtttgt ctataaacgt cgtaaaatgg ttaaagaaga
    36421 aggcttggca ttaacatctg gtatttctgg tatgttaggt gttactgaac cagctatgtt
    36481 tggtgtgaac ttacctctga aatatccatt tatcgctgcg atatcaacgt cttgtgtatt
    36541 gggggcaatc gttggtatga ataacgtact tggaaaagtt ggtgttggtg gcgtgccagc
    36601 attcatttca attcaaaaag aattttggcc agtatatctt attgtgacag ctattgctat
    36661 tgttgtacca tgtatactaa caattgtgat gtctcatttt agtaaacaaa aagcgaaaga
    36721 aattgttgaa gattaataaa ataaaaaagg ggcgttcgtt atttggacgt cctttattac
    36781 gttataaggt ggtaattgtg tgtcgaaaga aatagattgg agaaaatccg ttgtatatca
    36841 aatttatcct aagtcgttta atgatacgac ggggaatggt ataggagata ttaacggaat
    36901 tatagaaaaa ttggattata tcaagttatt gggtgttgat tatatttggt taacaccagt
    36961 gtatgaatca ccgatgaatg ataatggcta tgatatcagc aattatttag aaatcaatga
    37021 agactttgga acgatggatg attttgaaaa gttaatcaaa gttgctcatc aaaaagactt
    37081 gaaagtgatg ttagatattg tcattaatca tacgtcgacg gagcatgaat ggtttaaaga
    37141 agcccgtaaa tctaaagaca actcttatag agattattac tttttcagat catctgaaga
    37201 cggaccgcca acaaattggc attctaaatt tggtggtaat gcatggaagt atgattctga
    37261 gacagatgaa tattatttac atttatttga tgtcagtcaa gctgatttaa attgggataa
    37321 tccggaagta cgtcaatcgt tatatcgtat tgtcaatcat tggatagact tcggcgttga
    37381 tggttttcga tttgatgtca ttaacttaat ttctaaaggt gaatttaagg actctgacaa
    37441 aataggtaaa gaattttata cggatggtcc tagagtgcat gagtttctgc atgaattaaa
    37501 tcgtcaaacg tttggtaaca ctgacatgat gactgtagga gaaatgtctt cgacgacgat
    37561 tgaaaattgt attaagtata cacagccaga acgccaagaa ttgaatagtg tttttaattt
    37621 tcatcatcta aaggttgatt atgttgatgg tgaaaagtgg acaaatgcga agcttgattt
    37681 tcataagtta aaggaaattc tgatgcaatg gcaacgaggt atttatgacg gtggcggatg
    37741 gaacgcgatt ttctggtgta atcatgatca gccacgggta gtgtctagat ttggtgatga
    37801 tacgtcggaa gagatgagga tacaaagtgc taaaatgtta gctatcgcac tgcatatgtt
    37861 gcaagggacg ccatatattt accaaggtga agaaattggt atgacggacc cacattttac
    37921 atcaatagca caatatcgtg atgttgaatc gattaatgcc taccatcagt tgttaagtga
    37981 agggcatgct gaagcggatg tgttagcgat tttaggacag aagtcacgag acaattcgag
    38041 aacgcctatg caatggagtg atgatgttaa tgctggattt acagctggta agccttggat
    38101 tgatatttcg gaaaattatc atcaggtcaa cgttagacaa gcacttcaga ataaagattc
    38161 tattttctat acgtatcaaa aattaataca attaagacat acgcatgata ttattacgta
    38221 tggagacatt gtgccacgtt ttatggatca tgatcattta tttgtttatg aacgtcatta
    38281 taagaatcaa caatggctag taattgcgaa tttctcagca tcggctgttg atttgccaga
    38341 aggattggct agcgaaggtc gtgttgtgat tcaaacaggc acagtggaaa ataatacgat
    38401 aagcgggttt ggtgcaattg taatcgaaac aaacgcgtaa aataaattga gtggatgcgt
    38461 ttatatgatg aagcaaaaga agtttatgaa gatttatgag gcgttgaaag aagatatact
    38521 aaacgggcag attcaatatg gtgaacaaat tccgtctgaa catgatttgg tgcaattgta
    38581 ccagtcatct cgagagaccg tgcgtaaggc attagatttg ttggcattag acggtatgat
    38641 tcaaaagatt catggtaaag ggtcacttgt catttatcag gaggttacag agtttccatt
    38701 ttctgaactt gttagtttta aagaaatgca agaagaaatg ggtgtcgcat atttaactga
    38761 agttgttgtg aatgaggttg ttgaagcgca tgaagttcca gaagttcaac atgctttaaa
    38821 catcaattct agtgaatcac tcattcatat tgttagaact cgtcggctta accaacatgt
    38881 gaagattgtt gatgaagatt attttctaaa gtcgattgtt tcagatatag gtaatgatgt
    38941 tgcgagtgat tctatttatg attatttgga aaaggtatta aatcttaata ttagttattc
    39001 aagtaagtct attacttttg aaccgtttga tgaacaagca tatcaattgt ttggggatgt
    39061 ttcggtggct tattcagcaa cagttcgaag tattgtgtat ttagaaaata caacgccgtt
    39121 tcaatataac atttcaaaac atcttgcaaa tgaatttaaa tttaacgact tctcaagacg
    39181 tcgtataaag taaacaatga tataaatgat ttatacttgc aattaactat taaaatatag
    39241 taatatatat cttgccgtgc taggtgggga ggtagcggtt ccctgtactc gaaatccgct
    39301 ttatgcgagg cttaattcct ttgttgaggc cgtatttttg cgaagtctgc ccaaagcacg
    39361 tagtgtttga agatttcggt cctatgcaat atgaacccat gaaccatgtc aggtcctgac
    39421 ggaagcagca ttaagtggat catcatatgt gccgtagggt agccgagatt tagctaacga
    39481 ctttggttac gttcgtgaat tacgttcgat gcttaggtgc acggtttttt atttttaaaa
    39541 atattaaacc gattattaag agttgaaaat atatatttat agaagctact ttcttgaaga
    39601 caattcagcg tattatacgt ggaacatgtt tggggaagta gcttttttat atgtgaagtt
    39661 tgattcaagt gaaatcgatg cgcagtttga atgatttttt acggatataa aaagtaagaa
    39721 gttattaatt gatgataaag aaatgatggt gaaatgaggg ggagtatctt acaatagaat
    39781 tattaatgag atacgttatg attattgaca atcaaatccc tacggaggac atatgcaaat
    39841 atatttaagt actttaacag agttagatta tgataaatct ttaaatagta ttgaagaaag
    39901 ttttgatgat aatcctgaaa cgagttggca agcacgtgcg aaagtgaaac atttaaggaa
    39961 atctccttgc tataattttg aattagaagt aatagcgaaa aatgaaaata acgatgtcgt
    40021 tggacacgtt ttattaattg aagtagaaat gaatagtgat gacaagacgt attatggttt
    40081 ggcgattgcc tctttatcag ttcatcctga attacgtgga caaaaattag gtcgtggatt
    40141 ggttcaagca gtagaagaac gtgcaaaagc gcaagagtat agtacggttg ttgtagacca
    40201 ttgttttgac tactttgaaa agttgggtta tcagaatgct gctgagcatg acattaaatt
    40261 agaatctggt gatgcaccgt tacttgtaaa atatttatgg gataatttga cggatgcacc
    40321 acacggaatc gtaaaatttc cagaacattt ttattaattg ttcatttaag aagtaaaggt
    40381 attatcatgc tataatgaaa ggtaattgtt tatggaggtg ctaacttgaa ttatcaagcc
    40441 ttatatcgta tgtacagacc ccaaagtttc gaggatgtcg tcggacaaga acatgtcacg
    40501 aagacattgc gcaatgcgat ttcgaaagaa aaacagtcgc atgcatatat ttttagtggt
    40561 ccgagaggta cgggaaaaac gagtattgcc aaagtgtttg ctaaagcaat caactgttta
    40621 aatagcactg atggagaacc ttgtaatgaa tgtcatattt gtaaaggcat tacgcagggg
    40681 actaattcag atgtgataga aattgatgct gctagtaata atggcgttga tgaaataaga
    40741 aatattagag acaaagttaa atatgcacca agtgaatcga aatataaagt ttatattata
    40801 gatgaggtgc acatgctaac aacaggtgct tttaatgccc ttttaaagac gttagaagaa
    40861 cctccagcac acgctatttt tatattggca acgacagaac cacataaaat ccctccaaca
    40921 atcatttcta gggcacaacg ttttgatttt aaagcaatta gcctagatca aattgttgaa
    40981 cgtttaaaat ttgtagcaga tgcacaacaa attgaatgtg gagatgaagc cttggcattt
    41041 atcgctaaag cgtctgaagg gggtatgcgt gatgcattaa gtattatgga tcaggctatt
    41101 gctttcggcg atggcacatt gacattacaa gatgccctaa atgttacggg tagcgttcat
    41161 gatgaagcgt tggatcactt gtttgatgat attgtacaag gtgacgtaca agcatctttt
    41221 aaaaaatacc atcagtttat aacagaaggt aaagaagtga atcgcctaat aaatgatatg
    41281 atttattttg tcagagatac gattatgaat aaaacatctg agaaagatac tgagtatcga
    41341 gcactgatga acttagaatt agatatgtta tatcaaatga ttgatcttat taatgataca
    41401 ttagtgtcga ttcgttttag tgtgaatcaa aacgttcatt ttgaagtgtt gttagtaaaa
    41461 ttagctgagc agattaaggg tcaaccacaa gtgattgcga atgtagctga accagcacaa
    41521 attgcttcat cgccaaacac agatgtattg ttgcaacgta tggaacagtt agagcaagaa
    41581 ctaaaaacac taaaagcaca aggagtgagt gtcgctcctg ctcaaaaatc ttcgaaaaag
    41641 cctgcgagag gtatacaaaa atctaaaaat gcattttcaa tgcaacaaat tgcaaaagtg
    41701 ctagataaag cgaataaggc agatatcaaa ttgttgaaag atcattggca agaagtgatt
    41761 gatcatgcca aaaacaatga taaaaaatca ctcgttagtt tattgcaaaa ttcggaacct
    41821 gtggcggcaa gtgaagatca cgtacttgtg aaatttgagg aagagatcca ttgtgaaatc
    41881 gtcaataaag acgacgagaa acgtagtagt atagaaagtg ttgtatgtaa tatcgttaat
    41941 aaaaacgtta aagttgttgg tgtaccatca gatcaatggc aaagagttcg aacggagtat
    42001 ttacaaaatc gtaaaaacga aggcgatgat atgccaaagc aacaagcgca acaaacagat
    42061 attgctcaaa aagcaaaaga tcttttcggt gaagaaactg tacatgtgat agatgaagag
    42121 tgatacatga caagcgatat aatcgtatgt ataatgaaag aaacatcatt ttattgataa
    42181 atatttattg attttcaagg aggaaatgga atatgcgcgg tggcggaaac atgcaacaaa
    42241 tgatgaaaca aatgcaaaaa atgcaaaaga aaatggctca agaacaagaa aaacttaaag
    42301 aagagcgtat tgtaggaaca gctggcggtg gcatggttgc agttactgta actggtcata
    42361 aagaagttgt cgacgttgaa atcaaagaag aagctgtaga cccagatgat attgaaatgc
    42421 tacaagactt agtgttagca gctactaatg aagcgatgaa caaagctgat gagcttactc
    42481 aagaacgttt aggtaaacat actcaaggct taaacatccc tggaatgtga tcatagatgc
    42541 attatccaga acctatatca aaacttattg atagctttat gaaattgcca ggcattggtc
    42601 caaagacagc ccaacgtctg gcttttcata ccttagatat gaaagaagac gatgttgttc
    42661 agtttgccaa agcattagta gatgttaaaa gagaattaac atattgtagc gtatgtggtc
    42721 acattactga aaatgatcca tgttatattt gtgaagataa gcaaagagat cgttcagtta
    42781 tttgtgttgt ggaagatgac aaagatgtca tagctatgga aaaaatgaga gaatacaaag
    42841 gtttatatca cgttttacat gggtctattt cgcctatgga tggaattgga ccagaagata
    42901 ttaatattcc ttcattgatt gaacgcttga aaaacgatga agttagcgaa ttaatcttag
    42961 ctatgaaccc gaacttagaa ggggaatcta cagccatgta tatttctaga ttagttaagc
    43021 ctataggtat caaagtgacg agattagcac aagggttatc ggtaggtggc gatttagagt
    43081 atgctgacga agtaacatta tctaaagcaa tcgcaggtag aacagaaatg taatgtcttc
    43141 tattaaacat ttttgaattt aatactatag taagaaaagt cacagtgtaa tcattgtggc
    43201 tttttttatg gtgaggtgta ctactttatt tgtggtgtgt tggtggcatg gtttagctag
    43261 ttttactgag ggtggggaat atttaggaag caagccgttt gttgtgattt gttacttcta
    43321 atagtaatga ttcgaattgg attatcgaag taggaatacc gttatggtgt gttggtgtta
    43381 ttaatttgat aaatgcggtt gatggttaat gactatgcaa atgaaattct tttgtaattg
    43441 aaatgataga tgctggctta gtagttgtac ttctttggtc taaagcttat taaatcagcc
    43501 tgtatagcgg tgttttgaga gattatttaa aacttgtaaa tttattttta atttctggta
    43561 aaaaataacg ttctgttttg cggttttttt attatctttt cataaaaata accaccttat
    43621 ttgttttaga aaacgtacta ttcacaattg taatttcttt aagttcgatt tttagaatga
    43681 gagcgttcag aatggatagt aaaggtgtaa tttttactgt tgttaagcag tttgaaagtc
    43741 tgtatagtat ttatttgttg aggcaaacaa aacaactcaa cttaagaaat aacttgaatt
    43801 actaacgaaa attaatttta aaaagttgtt gacttaaatg ttaataaaat gtataattaa
    43861 ttcttgt
//
LOCUS       DALMNS010000005        41462 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.005, whole genome shotgun sequence.
ACCESSION   DALMNS010000005 DALMNS010000000
VERSION     DALMNS010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 41462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41462
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.005"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            32..1216
                     /gene="rocD"
                     /locus_tag="O6Y56_000253"
     CDS             32..1216
                     /gene="rocD"
                     /locus_tag="O6Y56_000253"
                     /EC_number="2.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HDB5573549.1"
                     /translation="MNSIIELTDYYSSNNYAPLKLVITKGKGVKVWDTDGKQYIDCIS
                     GFSVANQGHCHPTIVKAMTEQASKLSIISRVLYSDNLGKWEEKICHLAKKDKVLPLNS
                     GTEAVEAAIKIARKWGSEVKGITDGQVEIIAMNNNFHGRTLGSLSLSNHDAYKAGFHP
                     LLQGTTTVDFGDIEQLTQAISPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQI
                     LLIADEIQVGLGRTGKWFAMEWEQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTP
                     GTHGSTFGGNPLAIAISTAALDVLKDEQLVERSERLGSFLLKALLQLKHPSIKEIRGR
                     GLFIGIELNTDAAPFVDQLIQHGILCKDTHRTIIRLSPPLVIDKEEINQIVAAFQDVF
                     KN"
     gene            1255..2286
                     /locus_tag="O6Y56_000254"
     CDS             1255..2286
                     /locus_tag="O6Y56_000254"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDB5573550.1"
                     /translation="MIKVGIVGGSGYGAIELIRLLQTHPHVTIAHIYSHSKVDEPLKL
                     TFPHLQHIMQHFEALTVDNNDCDVIFFATPAPVSKTCIPPLVEKGIHVIDLSGAFRIK
                     NREIYEAYYKETAAAQVDLDHAIYSISEWQSLDNNGTKLISNPGCFPTATLLALHPLI
                     SEKIVDLSSIIIDAKTGVSGAGRSLSQRVHFSEMNENLSAYAIGNHKHKPEIEQYLSI
                     IAGQDVSVIFTPHLVPMTRGILSTIYVKLSSEYTTESLHKLMTSYYANQPFVRIRDIG
                     TFPTTKEVLGSNYCDIGIYVDETTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTT
                     GLKQSPVYP"
     gene            2298..3539
                     /gene="argJ"
                     /locus_tag="O6Y56_000255"
     CDS             2298..3539
                     /gene="argJ"
                     /locus_tag="O6Y56_000255"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HDB5573551.1"
                     /translation="MKHQETTSQQHNFSIIKHGDISTPQGFTAGGMHIGLRANKKDFG
                     WIYSSSLASSAAVYTLNQFKAAPLIVTEDTLQKSKGKLQALVVNSANANSCTGQQGID
                     DAQQTQTWVAQQLQIPSEHVAVASTGVIGEYLPMDKIKTGTEHINDANFATPGAFNES
                     ILTTDTCTKHIAVSLNIDGKTITIGGSAKGSGMIHPNMATMLAFITTDASIESNTLHQ
                     LLKSSTDHTFNMITVDGDTSTNDMVLVMANQQVEHQILNQDHPQWETFVDAFNFVCTF
                     LAKAIARDGEGATKLISVNVSGAKSISDARKIGKTIVSSNLVKSAIFGEDANFGRIIT
                     AIGYSGCEIDPNCTYVQLNQIPVVDKGMAVLFDEQAMSNTLTHENVTIDVQLGLGNAA
                     ATAYGCDLSYDYVRINASYRT"
     gene            3555..4325
                     /gene="argB"
                     /locus_tag="O6Y56_000256"
     CDS             3555..4325
                     /gene="argB"
                     /locus_tag="O6Y56_000256"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000668887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDB5573552.1"
                     /translation="MKFIVIKIGGSTLSDMHPSIINNIKHLRSNNIYPIIVHGGGPFI
                     NEALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQHQCSAIGLCGLD
                     AQLFEIKRFDQQYGYVGVPTTLNIDSLSYLCTKFVPIINSIGFNNHDGEFYNINADTL
                     AYFIAASLEAPIYVLSNIAGVLINDVVIPQLPLADINQYIEHGDIYGGMIPKVLDAKN
                     AIENGCPKVIIAPGNKPNIIEAIYNNDFVGTTILKSSV"
     gene            4610..5089
                     /locus_tag="O6Y56_000257"
     CDS             4610..5089
                     /locus_tag="O6Y56_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YagU family protein"
                     /protein_id="HDB5573553.1"
                     /translation="MVIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQ
                     QLGFSSEFTHQTYTFSNMELPWVSFIVHFSFSIVIAIIYCILVKKYAYLAMGQGAVFG
                     IVIWVLFHLIIMPIMHTVPAVWDQPFQEHISELFGHVVWMMTIELVRQHFVYRYKLN"
     gene            complement(5417..6061)
                     /locus_tag="O6Y56_000258"
     CDS             complement(5417..6061)
                     /locus_tag="O6Y56_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HDB5573554.1"
                     /translation="MTVFVMQLQSNLKSIEELISQSRWSYKKPRTVNYRYNQDKLMHR
                     LGDILVQYGIQHDTGLLPHEWHYHISPRGKADIVQHNRDGQPIYVSLSYSYPYIVCVV
                     DKEPVGIDIEKISQRLDWRTLVTCFSTNEAQQICSLNDFYQIWTQKESFTKLIGEGLI
                     KGLDIYDMTQSHFYQSREVKFKQFIFDQFMVQVCFLGQAPWGYKKVSVFQLLSS"
     gene            complement(6074..13249)
                     /locus_tag="O6Y56_000259"
     CDS             complement(6074..13249)
                     /locus_tag="O6Y56_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HDB5573555.1"
                     /translation="MIMGNLRFQQEYFRIYKNNTESTTHRNAYWVKLAKNVEATKMMY
                     ALSTIVQQHASIRHFFDVTTDDNLTMKLHEFLPFIEIKQVPSSSANYDLEAFFKQELS
                     TYHFNDSPLFKFKLFQFADAAYILLDFHVSIFDDSQIDIFLDDLCNAYRGNTVINNTR
                     QHAHLNRNDDKDNQDASHIALDSNYFRLENNSDIHIDSYLPIKHPFEQALYQTYLIDD
                     MTSIDMASLAVSVYLANHIMSQQHDVTLGIHVPSHLPNDLHGNIVPLTLTIDAKDVCQ
                     RFTSDFNKSVLQNMSQLQCAKSSLSLETIFHCYHQMMPCCNDVIEDVHQIHDAHTSLA
                     DIEIFPHQHGFKIIYNSAAYDLLSIETLSDLVRNIYLQITEENGNERTTVDELNLMTE
                     RDIQLYDDINLNLPEIDDAQTVVTLFEQQVEATPNHVAVQFDGVFITYQTLNARANDL
                     AHRLRNQYGVEPKDRVAVIAEKSIEMIIAMIGVLKAGGAYVPIDPNYPSDRQEYILKD
                     ATPKVVITYQALYENSKQNINHIDLNKIAWKNIDNLSKCNTLEDHAYVIYTSGTTGKP
                     KGTLIPHRGIVRLVHQNHYVPLNEETTILLSGTIAFDAATFEIYGALLNGGKLIVAKK
                     EQLLNPIALEQLINENDVNTMWLTSSLFNQIASERIEVLVPLKYLLIGGEVLNAKWVD
                     LLNQRPKHPQIINGYGPTENTTFTTTYNIPNKVPNRIPIGKPILGTHVYIMQGERRCG
                     VGIPGELCTSGFGLAAGYLNQPELTADKFIKDSNINQLMYRSGDIVRLLPDGNIDYLY
                     RKDKQVKIRGFRIELSEIEHALERIQGINKAVVIVQNHDQDQYIVAYYEAMHTLSHNK
                     IKSQLRMTLPEYMIPVNFMHIEQIPITINGKLDKKALPIMDYVDTYAYVAPSTDTEHL
                     LCQIFADILHVNQVGIHDNFFELGGHSLKATLVVNRIEASTGKRLQIGDLLQKPTVFE
                     LAQAIAKVQEQNYEVIPEAIVKDDYVLSSAQKRMYLLWKSNHKDTVYNIPFLWRLSSE
                     LNVAQLRQAVQHLIARHEILRTQYIVVDDEVRQRIVADVVADFEEVNTHFTDEQEIMR
                     QFVAPFNLEKPSQIRVRYIRSPLHAYLFIDTHHIINDGMSNIQLMNDLNALYQHKLLL
                     PLKLQYKDYSEWMSHRDMTKHRQYWLSKFKDEVPILSLPTDYVRPNIKTTNGAMMSFT
                     MNQQTRQLLQKYVEKHQITDFMFFMSVVMTLLSRYARKDDVVVGSVMSARMHKGTEQM
                     LGMFANTLVYRGQPSPDKIWTQFLQEVKEMSLEAYEHQEYPFECLVNDLDQSHDASRN
                     PLFDVMLVLQNNETNHAHFGHSKLTHIQHKSVTAKFDLSFIIEEDRDDYTINIEYNTD
                     LYHSETVRHMGNQCMIMIDYILKHQDTLQICDIPNGTEELLNWVNTHVNNRMLNVPGN
                     KSIISYFNEVVSRQGNHVALVMNDLTMTYETLRNYVDAIAHMLLSNGVGNGQRVALFT
                     ERSFEMIAAMLATVKVGASYIPIDIDFPKKRQGAILEDAKVTAVMSYGIEIETTLPVI
                     QLENAKGFVESKENEQYDDLHGDQLENTAMLDNEMYAIYTSGTTGMPKGVAIRQRNLL
                     NLVHAWSTELQLGDNEVFLQHANIVFDASVMEIYCCLLNGHTLVIPDREERVNPAQLQ
                     QLINKHRVTVASIPLQMCSVMENFYIEKLITGGATSTASFVKYIEKHCGTYFNAYGPS
                     ESTVITSYWSHQCGDLIPETIPIGKPLSNIQVYIMSDGLLCGIGMPGELCIAGDSLAI
                     GYINRPELMAEKWQNNPFGKGKLYHSGDLARYTSDGQIEFLGRIDKQVKVNGYRIELD
                     EIENAILAIRGISDCVVTVSHFDTHDILNAYYVGEQQVEQDLKQYLNDHLPKYMIPKT
                     ITHIDCMPLTTNDKVDTTRLPNPSPIQQSNKVYSEPSNEIEQTFVDVFGEVLKQNDVG
                     VDDDFFELGGNSLEAMLVVSHLKRFGHHISMQTLYQYKTVRQIVNYMHQNQQSLVALP
                     DNLSELQNIVMTRYNLGILEDSLSHRPLGNTLLTGATGFLGAYLIEALQGCSHRIYCF
                     IRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVLPENMDTIIHA
                     GARTDHFGDDDEFEKVNLQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSE
                     ADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTN
                     RFSMVMNDLLQLNCIGVSLAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMP
                     VKSLLECVKRKEIELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTKLTLKIMN
                     HISEKWPTITNNWLYHWAQYIKTIFNK"
     gene            complement(13696..14946)
                     /locus_tag="O6Y56_000260"
     CDS             complement(13696..14946)
                     /locus_tag="O6Y56_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5573556.1"
                     /translation="MKRLSTTLKVRLISNFLQLIITTAFIPFIALYLTDMLNQSIVGI
                     YLVVLVILKFPLSIISGYIIEIFPKKSLVLIYQLTMVVMLVLMGIFSSNQLWQIICFC
                     IAYAIFTIVWGLQFPVMDTLIMDAITEDVEHYIYKMSYWITNLSVAIGALLGGLIYGH
                     SMLILFLVAACIFLIVLVILYIWLPEDQNQSVRTVANAQTPFYQQFHILKVLRSYKSV
                     LKDRNYMLMISGFSILMMGEFSTSSYIAIRLKDQFETISIGPYDITGAKMLAILLMTN
                     TIGVIVLTYFISKVVLKIDFKIALVFGLLFYIVGYSGITYLNQFSLLILFMMIATIGE
                     IVYSPIFEEQRFKIIPEDKRGTYSAFHALGIHMSETLARLGIVLGVFLTSLQMGLCMF
                     ILLVMGALLLVTGVFRGRKKVSID"
     gene            complement(15573..16604)
                     /locus_tag="O6Y56_000261"
     CDS             complement(15573..16604)
                     /locus_tag="O6Y56_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000171656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HDB5573557.1"
                     /translation="MTLETLIKEQLDPHLVEVDEGTYYPRTFIQQLFVDGYFGEAALR
                     KNAEVIEAVSQSCLTTGFCLWCQLAFSTYLENATQPHLNNDLQQQLLSGEILGATGLS
                     NPMKSFNDLEKLNLEHTYVDGQLVVSGRMPAVSNIQEDHYFGAISKHESSDDFVMFIL
                     RANQDGITLVEKINFLGVNGSATYQITLNQVVVPQSQIITHDAKQFAATIRPQFIAYQ
                     IPIGLGSIKSSLELIDAFSNAQNGINQYLEYDVEAFKKRYRQLREEYYAILDDGNLTS
                     HLNELISLKKDIGYLLLDVNQASVVNGGSRAYTPYSPQVRKLKEGFFFAALTPTLRHL
                     GKLEAELNS"
     gene            complement(16617..17378)
                     /locus_tag="O6Y56_000262"
     CDS             complement(16617..17378)
                     /locus_tag="O6Y56_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5573558.1"
                     /translation="MTRLTINKIILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVG
                     KSIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLI
                     RPISPIAWAPFVVLWFGIGSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLN
                     LTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLN
                     LEDVLAAIFFIGLFGFIIDRFISYIEQFILRRFGE"
     gene            complement(17375..18349)
                     /locus_tag="O6Y56_000263"
     CDS             complement(17375..18349)
                     /locus_tag="O6Y56_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDB5573559.1"
                     /translation="MKRLSIIVIIGIFIITGCDWQRTSKEPSKNVQQQQVIKIGYLPI
                     THSANLMMTKKLLSQHNHPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQ
                     KGSNIKAVALGHHEGNVIMGQKGMHLNEFNNTGDDYHFGIPHRYSTHYLLLEELRKQL
                     KVEPGHFSYHEMSPAEMPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDA
                     YCCVLVLRGELLDQHKDVAQAFVKDYKNSGFKMNDRKKSVDIMTHHFKQSRDVLTQSA
                     AWTSYGDLTIKPSGYQEITTLVKQHHLFNPPAYDDFVEPSLYKEASRS"
     gene            complement(18363..19103)
                     /locus_tag="O6Y56_000264"
     CDS             complement(18363..19103)
                     /locus_tag="O6Y56_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5573560.1"
                     /translation="MIKIQQLQHHFGSHKVIHNFNLEISKGEIVTFIGKSGCGKSTLL
                     NIIGGFIYPSSGRVIIDNEIKQQPSPDCLMLFQHHNLLPWKTINDNIRIGFQQKISDE
                     EINAQLKLVDLEGRGKHFPEQLSGGMKQRVALCRAHVHKPNVILMDEPLGALDAFTRY
                     KLQDQLVQLKHKTESTIILVTHDIDEAIYLSDRIVLLGEGCNIISQYDITASHPRSRN
                     DSHLLKIRNDIMETFALNHHQVEPEYYL"
     gene            complement(19445..19957)
                     /locus_tag="O6Y56_000265"
     CDS             complement(19445..19957)
                     /locus_tag="O6Y56_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HDB5573561.1"
                     /translation="MTLFLLEANNLDFASTKEELEAKAASLSTKTIPTLIEVQATENL
                     THGYFIVEANDEAEAKQFLTEAGISIQLVKEVRLVGKDLDEVKNGDAHVDYLVTWNIP
                     EGITMDQYLARKKKNSVHYEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAV
                     DTPIDGIEKL"
     gene            20136..20339
                     /locus_tag="O6Y56_000266"
     CDS             20136..20339
                     /locus_tag="O6Y56_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573562.1"
                     /translation="MDKESVVASLARNKKIAVETMAGQRYIIERILHTNDEKHIHILK
                     PKDVVLDVDSIKEIDENHLNDAT"
     gene            complement(20400..21359)
                     /locus_tag="O6Y56_000267"
     CDS             complement(20400..21359)
                     /locus_tag="O6Y56_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDB5573563.1"
                     /translation="MNGKKANTINRYKYFHHVNHQKIQQSSKKTLWASLIITLLFTVI
                     EFVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYFASKKPTARYTFGYLRFEILAAF
                     LNGLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVNIILTVILVRSLKQED
                     NINIQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVISLIILRGGYKITRN
                     AWLILMESVPQHLDTDQIMADIKNIDGILDVHEFHLWSITTEHYSLSAHVVLDKKYDG
                     DDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT"
     gene            complement(22004..23491)
                     /locus_tag="O6Y56_000268"
     CDS             complement(22004..23491)
                     /locus_tag="O6Y56_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HDB5573564.1"
                     /translation="MAVNVRDYIAENYGLFINGEFVKGSSDETIEVTNPATGETLSHI
                     TRAKDKDVDHAVEVAQEAFETWSLTSKSERAQMLRDIGDKLMAQKDKIAMIETLNNGK
                     PIRETTAIDIPFAARHFHYFASVIETEEGTVNDIDKDTMSIVRHEPIGVVGAVVAWNF
                     PMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESG
                     NAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVE
                     GIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSNIKVGDPQDEATQMGSQTG
                     KDQLDKIQSYIDAAKESDAQILAGGHRLTENGLDKGFFFEPTLIAVPDNHHKLAQEEI
                     FGPVLTVIKVKDDQEAIDIANDSEYGLAGGVFSQNITRALNIAKAVRTGRIWINTYNQ
                     VPEGAPFGGYKKSGIGRETYKGALSNYQQVKNIYIDTSNALKGLY"
     gene            23918..24301
                     /locus_tag="O6Y56_000269"
     CDS             23918..24301
                     /locus_tag="O6Y56_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HDB5573565.1"
                     /translation="MRLILIVIGLIFTALGIAGAVLPLLPTTPFLLVAVFCFARSSDR
                     FYNWLINQKIYKEYVENFYLHRGYTLQQKIKILISLYIVIGFSIYMVDVLAVRVGLII
                     MVIIQTAVLFTFVKTLPKSNNKIEE"
     gene            24308..24634
                     /gene="isdI"
                     /locus_tag="O6Y56_000270"
     CDS             24308..24634
                     /gene="isdI"
                     /locus_tag="O6Y56_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylobilin-forming heme oxygenase IsdI"
                     /protein_id="HDB5573566.1"
                     /translation="MFMAENRLQLQKGSAEETIERFYNRQGIETIEGFQQMFVTKTLN
                     TEDTDEVKILTIWESEDSFNNWLNSDVFKEAHKNVRLKSDDDGQQSPILSNKVFKYDI
                     GYHYQK"
     gene            complement(24699..25844)
                     /gene="cap8P"
                     /locus_tag="O6Y56_000271"
     CDS             complement(24699..25844)
                     /gene="cap8P"
                     /locus_tag="O6Y56_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8P"
                     /protein_id="HDB5573567.1"
                     /translation="MKKIMVIFGTRPEAIKMAPLVKEIDHNGNFEANIVITAQHRDML
                     DSVLSIFDIQADHDLNIMQDQQTLAGITANALAKLDSIINEEQPDMILVHGDTTTTFV
                     GSLAAFYHQIPVGHVEAGLRTHQKYSPFPEELNRVMVSNIAELNFAPTVIAAKNLLFE
                     NKDKESIFITGNTVIDALSTTVQNDFVSTIINKHKGKKVILLTAHRRENIGEPMHQIF
                     KAVRDLADEYKDVVFIYPMHRNPKVRAIAEKYLSGRNRIELIEPLDAIEFHNFTNQSY
                     LVLTDSGGIQEEAPTFGKPVLVLRNHTERPEGVEAGTSRVIGTDYDNIVRNVKQLIED
                     DEAYQRMSQANNPYGDGQASRRICEAIEYYFGLRSDKPDEFVPLRHK"
     gene            complement(25921..27183)
                     /gene="cap8O"
                     /locus_tag="O6Y56_000272"
     CDS             complement(25921..27183)
                     /gene="cap8O"
                     /locus_tag="O6Y56_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8O"
                     /protein_id="HDB5573568.1"
                     /translation="MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQSGQI
                     SIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFIIAVPTPNNDDQYRSCDISLVMRALD
                     SILPFLEKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGVDIYLVHCPERVLPGKILE
                     ELVHNNRIIGGVTKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNISLA
                     NELTKICNNLNINVLDVIEMANKHPRVNIHQPGPGVGGHCLAVDPYFIIAKDPENAKL
                     IQTGREINNSMPAYVVDTTKQIIKALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLN
                     QEPDIEVCAYDPHVELDFVEHDMSHAVKDASLVLILSDHSEFKNLSDSHFDKMKHKVI
                     FDTKNVVKSSFEDVSYYNYGNIFNFIDK"
     gene            complement(27237..28124)
                     /gene="capN"
                     /locus_tag="O6Y56_000273"
     CDS             complement(27237..28124)
                     /gene="capN"
                     /locus_tag="O6Y56_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide type 5/8 biosynthesis
                     epimerase CapN"
                     /protein_id="HDB5573569.1"
                     /translation="MRKNILITGIHGYIGNALKDKLIEQGHQVDQINVRNQLWKSTSF
                     KDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQLAQKAKAEDIKQFIFMSTMAVYG
                     KEGQVGKSDQIDTQTPMNPTTNYGISKKFAEQALQALISDSFKVAIVRPPMIYGAHCP
                     GNFQRLMQLSKRLPIIPNINNQRSALYIKHLTAFIDQLISLEVTGVYHPQDSFYFDTS
                     SVMYEIRRQSHRKTVLINMPSMLNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPG
                     KMSLVIADIMDETTTKDKA"
     gene            complement(28124..28681)
                     /gene="cap8M"
                     /locus_tag="O6Y56_000274"
     CDS             complement(28124..28681)
                     /gene="cap8M"
                     /locus_tag="O6Y56_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8M"
                     /protein_id="HDB5573570.1"
                     /translation="MKRLFDVVSSIYGLVVLSPILLITALLIKMESSGPAIFKQKRPT
                     INNELFNIYKFRSMKIDTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEM
                     SIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTH
                     QSMMLDMYIIYKTIKNIVTSEGVHH"
     gene            complement(28692..29897)
                     /gene="cap8L"
                     /locus_tag="O6Y56_000275"
     CDS             complement(28692..29897)
                     /gene="cap8L"
                     /locus_tag="O6Y56_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8L"
                     /protein_id="HDB5573571.1"
                     /translation="MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGW
                     PYEYSNHKQVAKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKY
                     DQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYI
                     NKHVYKNAENVIVLGTEMKNYLVNHQISKNPDNIHVIPNWYDMRQLQDNRIYNDTFKA
                     YREQYDKILLYSGNMGQLQDMETLISFLKLNKDQPQTLTILCGHGKKFADVKTAIEDH
                     RIENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMD
                     KQSDIVQHVEQYDAGIQIDNGDAHAIYNFINTHSSKELHEMGERAHQLFKDKYTREIN
                     TMKYYNLLK"
     gene            complement(29931..31169)
                     /gene="cap8K"
                     /locus_tag="O6Y56_000276"
     CDS             complement(29931..31169)
                     /gene="cap8K"
                     /locus_tag="O6Y56_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001238807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8K"
                     /protein_id="HDB5573572.1"
                     /translation="MRLNKFIGDSFLMILSSGIAQVILIITTPIITRLYSPTEFGEFT
                     IFSNIAMILIPIINARYDLLIVNTKNDRSANILSQISFLISLLILLILIPIFAISAWL
                     YPNFILDFIFIIIMLFLVSLTNIFTNYLNKERKYKVLSLINVFRAGSMALLQIIFGLL
                     ALGSLGLIIGFSLSYIAGITLGYKTFKKHFNIVRDKEETKALFLENKNQLVYSTPSIL
                     LNSLSFSVVVFFIGILYTNTEVGIYGMAIRVLGIPVTIISLGLSKIFMQQANDYYIEH
                     GNFRNLLLKFSSILVIVSIILYVPLYLFSEELVNILLGHSWVDAITVIKIVIPLFVIR
                     LIVSTVSLSVIVLQKQQLELILQALFLIGTTVTFVISKMLNLTFLNFVSINTVVLIVS
                     YMIFFIALYYFAKNKQFKNS"
     gene            complement(31178..31735)
                     /gene="cap8J"
                     /locus_tag="O6Y56_000277"
     CDS             complement(31178..31735)
                     /gene="cap8J"
                     /locus_tag="O6Y56_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000636149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8J"
                     /protein_id="HDB5573573.1"
                     /translation="MIVKTFMKSKIFRLMNTPLLLFYKKEYLTGYYFENKVAGWLWAW
                     KAVPFKLLGINTSLPFPADITVRMHNPNNIVFDKNDIHIFQSPGTYFNNFSAVIYIGR
                     GVYIAPNVGIITANHNIKNLKSHAPGEDVKIGNYSWIGMNSVILPGVELGEHTIVGAG
                     SVVTKSFPEGNVVIGGNPAKVIKKI"
     gene            complement(31732..33126)
                     /gene="cap8I"
                     /locus_tag="O6Y56_000278"
     CDS             complement(31732..33126)
                     /gene="cap8I"
                     /locus_tag="O6Y56_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001034053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8I"
                     /protein_id="HDB5573574.1"
                     /translation="MNKIYNVTSYVIAILMFPCLMLGDKPLLFLAPISYGVGKLFISF
                     SNNPNFKFSKIVYDVLGFLRLVFIPAMIVFFQDSTIDNLPLGQAYFNQAVIYMSVEFI
                     IGSLFILILSKLFKHEVVSRNSFTLSGSSIYYIVFGLVICGIFVAFPEVRKNISFLII
                     KTDAMGRGTEATSGLNVLFVMLFQLALALLFLIIAYASYKKYKENPKIIYVVLPLAIG
                     ILNISLIVGERRSYQLYTMVAVLTVVSLLFSKHKRRINIIIISVGIFVLALMTLYKEL
                     YVFNYSSYSEALNSTSVSNLKIVDTLQSYFYGPSNIAASIDYLNYYNGSFKQYLFDNT
                     RAVFGFNFFVDKKQLITSQLFNQLIYGSKQLTGHLISSAGYGIIYFGPLFFYLNLIAN
                     IFFAFLSEYIIRKSHSLEVIFIGTYIYMRLITSIFSHPTPLITLISMILVVYVIAIIP
                     GIIIKKFTKKVGIE"
     gene            complement(33119..34198)
                     /gene="cap8H"
                     /locus_tag="O6Y56_000279"
     CDS             complement(33119..34198)
                     /gene="cap8H"
                     /locus_tag="O6Y56_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001216935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8H"
                     /protein_id="HDB5573575.1"
                     /translation="MRIAILGATNIKHMSLLSHYLNHIDLNINEVDIIYTDKYDIEEH
                     IQGINNYYKYKVDIKEDWTFIKKAIAYYRFRPYAMKILKENHYDFVIVWGSYTGHLFK
                     SFLEKHYKNKFILNIRDYFFENNKLIKYRMKKIVDASRLTTLSSEGFLKFLPKSEKYR
                     IIYSYNMSIIRESNVTDGFKKRWPINIGFIGNVRFNEINQKLIKELANDSRFHMQYFG
                     TGSEKLEVFARENFINNITFSGGFDLKETPKYLNKIDILNNLFGNQNIALDTALSIRM
                     YYALFLNKPIITTDDTFTATEANKFGLGFSVNPENLKGIGDELMDWYNNLDVMDINHK
                     REAYRNDVIENNKQFYQEIGRIFNE"
     gene            complement(34201..35325)
                     /gene="cap8G"
                     /locus_tag="O6Y56_000280"
     CDS             complement(34201..35325)
                     /gene="cap8G"
                     /locus_tag="O6Y56_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8G"
                     /protein_id="HDB5573576.1"
                     /translation="MEKLKLMTIVGTRPEIIRLSSTIKACDQYFNQILVHTGQNYDYT
                     LNQIFFDDLELRQPDHYLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCL
                     AAVSAKRLKIPVFHMEAGNRCFDQNVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGF
                     NKANIFVTGSPMTEVIEAHRDKINHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKS
                     LMNAINDIAKKYKMPVIYSTHPRSWKKIEESKFEFDPLVKQLKPFGFFDYNALQKDAF
                     VVLSDSGTLSEESSILKFPGVLIRTSTERPEVLDKGTVIVGGITYNNLIQSVELAREM
                     QNNNEPMIDAIDYKDTNVSTKVVKIIQSYKDIINRNTWRK"
     gene            complement(35329..36438)
                     /gene="cap8F"
                     /locus_tag="O6Y56_000281"
     CDS             complement(35329..36438)
                     /gene="cap8F"
                     /locus_tag="O6Y56_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8F"
                     /protein_id="HDB5573577.1"
                     /translation="MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESAL
                     LKADFVVHLAGVNRPEHDKEFSLGNVSYLDHVFDILTRNTKKPAILLSSSIQATQNNP
                     YGESKLQGEQLLRQYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQ
                     VNNRDVELTLNYVDDIIAEIKRAIEGNPTIENGVPTVPNVFKVTLGEIVDLLYKFKQS
                     RLDRTLPKLDNLFEKDLYSTYLSYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSV
                     NISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVG
                     YTHNIENLGDTDMVTIMWVNEMFDPNQPDTYFLEV"
     gene            complement(36451..37479)
                     /gene="cap8E"
                     /locus_tag="O6Y56_000282"
     CDS             complement(36451..37479)
                     /gene="cap8E"
                     /locus_tag="O6Y56_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8E"
                     /protein_id="HDB5573578.1"
                     /translation="MFDDKILLITGGTGSFGNAVMKRFLDSNIKEIRIFSRDEKKQDD
                     IRKKYNNSKLKFYIGDVRDSQSVETAMRDVDYVFHAAALKQVPSCEFFPVEAVKTNII
                     GTENVLQSAIHQNVKKVICLSTDKAAYPINAMGISKAMMEKVFVAKSRNIRSEQTLIC
                     GTRYGNVMASRGSVIPLFIEKIKAGEPLTITDPEMTRFLMSLEDAVELVVHAFKHAET
                     GDIMVQKAPSSTVGDLATALLELFEADNAIEIIGTRHGEKKAETLLTREEYAQCEDMG
                     DYFRVPADSRDLNYSNYVETGNEKITQSYEYNSDNTHILTVEEIKEKLLTLEYVRNEL
                     NDYKASMR"
     gene            complement(37469..39292)
                     /gene="cap8D"
                     /locus_tag="O6Y56_000283"
     CDS             complement(37469..39292)
                     /gene="cap8D"
                     /locus_tag="O6Y56_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8D"
                     /protein_id="HDB5573579.1"
                     /translation="MAHLSVKLRLLILALIDSLIVTFSVFVSYYILEPYFKTYSVKLL
                     ILAAISLFISHHISAFIFNMYHRAWEYASVSELILIVKAVTTSIVITMVVVTIVTGNR
                     PFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNKKPTLVVGAGQAGSMLIRQML
                     KSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPELVRKYKIKKIIIAIPTIGQ
                     ERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVEDLLGRDPVELDMDMIS
                     NELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIYLINRELRNRFGKNI
                     DIVPIIADVQNRARMFEIMEMYKPYAVYHAAAHKHVPLMEDNPEEAVRNNILGTKNTA
                     EAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTNFVAVRFGNVL
                     GSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEGGEVFVLDM
                     GEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQVFEKIYR
                     GKVQHMKCNEVEAIIQDIVNDFSKEKIINYANGKKGDNYVR"
     gene            complement(39312..40076)
                     /gene="cap8C"
                     /locus_tag="O6Y56_000284"
     CDS             complement(39312..40076)
                     /gene="cap8C"
                     /locus_tag="O6Y56_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8C"
                     /protein_id="HDB5573580.1"
                     /translation="MIDIHNHILPNIDDGPTNETEMLALLKQATTQGVTEIIVTSHHL
                     HPRYTTPIEKVKSCLNHIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDS
                     RYLLIEFPSNEVPHYTDQLFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALS
                     QVTTASLAGISGKKIRKLAIQMIENNLTHFIGSDAHNTEIRPFLLKDLFNDKKLRDYY
                     EDMNGFISNAKLVVDDKKIPKRMPQQDYKQKRWFGL"
     gene            complement(40079..40765)
                     /gene="cap8B"
                     /locus_tag="O6Y56_000285"
     CDS             complement(40079..40765)
                     /gene="cap8B"
                     /locus_tag="O6Y56_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 8 capsular polysaccharide synthesis protein
                     Cap8B"
                     /protein_id="HDB5573581.1"
                     /translation="MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRL
                     LVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDMRKPTQNYIFNEQNNNGLSSLII
                     GRTTMSEAITSTEIDNLDLLTAGPVPPNPSELIGSERFKELVDMFNKRYDIIIVDTPP
                     VNTVTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKTLMEKAGSNILGVILNKAKVDKS
                     SSYYHYYGDE"
     gene            complement(40781..41449)
                     /gene="capA"
                     /locus_tag="O6Y56_000286"
     CDS             complement(40781..41449)
                     /gene="capA"
                     /locus_tag="O6Y56_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide type 5/8 biosynthesis
                     protein CapA"
                     /protein_id="HDB5573582.1"
                     /translation="MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKY
                     QANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSK
                     LSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKA
                     DGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSI
                     QKYN"
BASE COUNT        13355 a         7814 c         6138 g        14155 t
ORIGIN      
        1 tgaattgtat aaatataaag gagggagacc gatgaattca atcattgaat taactgatta
       61 ttatagctct aataattatg caccacttaa gcttgtaatt actaaaggta aaggtgtcaa
      121 agtttgggat actgatggca aacaatatat agattgcatc tcgggttttt cagttgcaaa
      181 ccaaggccat tgccatccaa caattgttaa agcgatgaca gaacaagctt caaagttgtc
      241 tatcatttca cgtgtccttt atagtgacaa tctcgggaaa tgggaagaaa aaatttgtca
      301 tcttgctaag aaagacaaag tactccccct taactctggt actgaagctg ttgaagcagc
      361 cattaaaatt gctagaaaat ggggctctga agttaaaggc attactgacg gacaagttga
      421 aatcatcgct atgaataaca attttcacgg tcgtacactt ggctcattat cactatctaa
      481 ccacgacgca tataaagcag gatttcaccc cctacttcaa ggcactacaa cagtagattt
      541 tggagacatt gaacaattaa cacaagctat ttcaccgaat acagcagcaa ttattttgga
      601 accaattcaa ggtgaaggtg gcgttaatat accaccgaaa ggatatattc aagctgtgcg
      661 tcaactatgt gataaacatc aaatattatt gattgcagat gaaattcaag ttggtcttgg
      721 tagaactggg aaatggtttg ctatggaatg ggagcaagtt gttccagaca tttatatttt
      781 aggtaaggca ttgggtggcg gcttataccc tgtatctgct gtacttgcaa ataatgatgt
      841 catgcgtgtt ctaacaccag gtacacatgg ttcaacattt ggtggtaacc ctttagccat
      901 tgcaatatcg acggcagcgc ttgatgtact taaagatgaa caactggttg aacgatcaga
      961 acgcttaggt tcatttttat taaaagcgtt gctacaactt aaacatccta gtattaaaga
     1021 aattagaggt cgtggtttat ttataggcat agagcttaac acagatgctg caccttttgt
     1081 ggatcaactg attcaacatg gaatcttatg caaagacacg catcgtacta tcattcgatt
     1141 gtcaccacct ctagtcattg ataaagagga aatcaatcaa attgttgcag cttttcaaga
     1201 cgtttttaaa aattaacaat taatcattta tatatgatat aggagggatt catgatgatt
     1261 aaagtaggta tcgttggcgg tagcggttat ggcgcaattg aattaattcg attattacaa
     1321 acacatcctc atgtaacgat tgcacacatc tactcacatt caaaagtaga tgaaccgttg
     1381 aaattaacat ttccacattt acaacatatt atgcaacatt tcgaagcact tacagtggac
     1441 aataatgact gtgatgtaat tttctttgcg acaccagcac ccgtaagtaa aacatgtatc
     1501 cctcccttag tagaaaaagg tattcatgtt atcgatttat ctggcgcatt tagaattaag
     1561 aatcgtgaaa tatatgaagc atattacaaa gaaactgctg cagcacaagt tgatttggat
     1621 catgctattt acagcatttc agaatggcaa tctttagata acaatggaac gaaactcatt
     1681 tctaaccctg gctgtttccc tacagcaacg ttattagcat tacatccact tattagcgaa
     1741 aaaattgtag atttgtcatc tattattatt gatgctaaga ccggcgtgtc aggtgctggt
     1801 cgttcattat cacaacgtgt tcatttttca gaaatgaatg aaaatctaag tgcttatgca
     1861 atcggaaacc ataaacacaa accggaaatc gagcaatatt tatctatcat tgcaggtcaa
     1921 gatgtatcag tcatatttac accacatctc gtaccaatga cacgaggtat tttatcaaca
     1981 atatatgtca aattatcatc tgaatatacg actgaatcat tacataaatt aatgacctct
     2041 tattatgcta atcagccatt tgtcagaatt agagatattg ggacttttcc aaccacaaaa
     2101 gaagtactcg gtagtaacta ctgcgatatc ggcatctatg tagatgaaac aacgcaaaca
     2161 gcaattttag tatcagtgat tgataacctt gtcaaagggg caagtggtca agccattcaa
     2221 aacttaaata tattatatga ttttgaagtt acgactggcc taaaacaatc accagtttat
     2281 ccataagggg tgttagaatg aaacatcaag aaacgacatc acagcaacat aacttttcaa
     2341 ttattaaaca tggcgatatc agtacacctc aaggcttcac ggccggtggt atgcacatcg
     2401 gtttacgcgc taacaaaaaa gactttggct ggatttactc atcgtcttta gcaagttcag
     2461 ctgccgtata tactttaaac caatttaaag ctgcaccact tattgtcact gaagacactt
     2521 tacaaaagtc taaagggaaa ttacaagcac ttgttgttaa ttcagctaat gcaaattctt
     2581 gcacaggtca gcaaggtatc gatgatgccc aacaaactca aacatgggta gctcaacaac
     2641 ttcaaatacc atctgagcat gttgctgttg cttcaactgg ggtcattgga gaatatttac
     2701 caatggataa aattaaaact ggtacagaac atattaatga tgctaatttt gcaacgccag
     2761 gtgcgtttaa cgagtcaatt ttaacaactg atacatgtac aaagcatatc gctgtatcac
     2821 taaatattga tggtaaaacc attacaattg gtggcagtgc taaaggatca ggtatgattc
     2881 acccaaatat ggctaccatg cttgctttta taacaaccga tgcatcaatt gaatcgaata
     2941 cacttcatca attattaaaa tcttcgactg accatacatt taatatgatt actgttgatg
     3001 gcgatacaag tacaaatgac atggtattag tcatggcaaa tcagcaagtt gaacaccaaa
     3061 tacttaatca agaccatcca caatgggaaa catttgttga tgcattcaat tttgtctgta
     3121 catttttagc taaagctata gccagagatg gcgaaggcgc aacaaagtta atcagtgtca
     3181 atgtttcagg cgctaaatca atatcagacg caagaaaaat cggtaaaact atcgtaagtt
     3241 caaatctagt aaaatcagct atttttggcg aagatgccaa ttttggtcga atcattacag
     3301 ctattggcta cagcggatgt gaaattgatc ctaactgcac atatgttcaa ctgaaccaaa
     3361 tacctgtcgt ggataaaggc atggctgtac tatttgatga gcaagctatg tcgaatacat
     3421 taactcatga aaatgtcaca attgacgttc agcttggttt aggtaacgct gcagcgactg
     3481 catacggttg tgatttatcc tatgattatg tgcgtattaa cgcatcatat cgaacataag
     3541 gtggtgttgg ttagatgaaa tttattgtca ttaaaattgg tggcagtaca ctaagtgaca
     3601 tgcatccatc aattattaac aacattaagc atttacgatc aaacaacatc taccccatta
     3661 tcgttcatgg cggtggccca tttattaatg aagcattatc aaaccagcaa atcgagccac
     3721 actttgttaa tggcctaaga gtgactgata aagcaactat gactattact aaacacacgc
     3781 tcattgcaga cgttaacact gcattagtag ctcaatttaa ccagcaccaa tgttctgcaa
     3841 taggcttatg tggtttggat gctcaattat ttgaaattaa acgttttgat caacaatatg
     3901 gatatgtcgg ggttccaacc actttaaata tagactcatt gtcttattta tgtactaaat
     3961 ttgtacctat catcaattcg attggtttca ataaccatga tggagaattt tacaacataa
     4021 atgcagacac actcgcctat tttattgcag catcattaga agcacccatt tatgtactca
     4081 gtaatattgc tggcgtgcta atcaacgatg ttgttatacc tcaactacca ttagctgata
     4141 ttaatcagta tattgagcat ggtgatattt atggaggtat gattcctaaa gtgcttgatg
     4201 ctaaaaatgc tattgaaaat ggctgtccta aagttattat tgcaccagga aacaagccaa
     4261 atattatcga agctatttac aataatgatt ttgttgggac aacgatacta aaatcatcag
     4321 tatgactttg aatatgacca ctcaatcttg tattattcgg cttcgaagca taattgtacc
     4381 taatttgttt aatgattatg cagtgtcacc ttttcacctg tctcatttca caaaaggaat
     4441 cttagaatat agtatgatac aatatgagat gaaaaacact attagtgatt ttcaaatttg
     4501 taacttgaaa tattttatat tttaaaagtt tttcattgtg attattttca caaaatacta
     4561 taatgaggat agaaaaaaga gaggggtcct taagttgacg aaacgacaaa tggtaatatt
     4621 catttatgcc ggaatcattg gtggcttgtt gtctggaatt gtaaaattag gttgggaggt
     4681 catgtttcca cctcgtacac cagaacgaaa tgcaacaaac ccacctcaag agttattgca
     4741 acaattagga tttagtagtg aatttacaca tcagacgtat acattttcaa atatggaatt
     4801 accttgggta agcttcattg ttcactttag tttttctatc gtcattgcaa ttatttattg
     4861 catattagtt aaaaaatacg cttacttagc aatgggacaa ggtgctgtat ttggtattgt
     4921 aatatgggtg ttattccacc ttatcattat gccgattatg catactgtac ctgctgtgtg
     4981 ggatcaacca ttccaagagc acatatcaga attatttgga catgtcgtct ggatgatgac
     5041 tattgaatta gtacgacaac attttgtcta tcgctataaa ttaaattaat tcatataaac
     5101 atcgtaacgt gagttttaaa tcatcgtttg agtatgatga ttgatgctca cgttatttta
     5161 ttaactgaca tgatatgatt ccagccaact tacgtgagca ttaaaatctc aaatgcgtcg
     5221 taacaagcca ttatttttgg caatttcaat attgctcagt atattttcac cttatcactt
     5281 actttaatct cgtcatgatt ttgaatgatg ccatcgtgta ttcacctttc atttttccaa
     5341 taaaaaacat ctaacagtaa acatttaggc agtatagttt aaaatcactg cgcaatgata
     5401 ctgttagacg ccatgtttaa ctactcaata attgaaatac agacactttt ttataacccc
     5461 agggtgcctg tcctaagaaa catacctgta ccataaactg atcaaaaata aattgtttga
     5521 acttcacttc acgtgattga taaaagtgtg attgcgtcat atcataaatg tccaaccctt
     5581 tgattaaacc ttcaccaatc aattttgtaa aactttcttt ttgtgtccat atttgataaa
     5641 aatcatttaa actacatatt tgctgtgctt cgtttgtaga gaaacacgtc actaatgtac
     5701 gccagtctaa acgttgtgat atcttttcga tatcaatacc aactggttct ttatcgacaa
     5761 cacacacgat ataaggataa ctatatgata agctcacata gatgggctgt ccatcacgat
     5821 tgtgttgaac tatatctgcc ttacctcgtg gcgaaatgtg ataatgccat tcatgtggta
     5881 ataaccctgt gtcatgttga attccatatt gcactaaaat atctcccaat ctgtgcatga
     5941 gtttatcttg attgtatcta tagttgactg tacgcggttt tttatatgac caacgacttt
     6001 gtgatattaa ttcttcaata cttttcaagt tactctgtaa ttgcattaca aatactgtca
     6061 taactttccc tacttactta ttgaatattg ttttgatata ttgcgcccaa tgatacagcc
     6121 aattgttagt tatcgttggc catttttcac tgatgtgatt cattattttt aatgttaatt
     6181 ttgtatctat cattgctagt tgttgttcac ggtcaacact agttaatcca atcgtttcgt
     6241 acatgtcttg tttctgtaaa atttcattaa atgattcatc actgacgagt tcaatttctt
     6301 tgcgcttaac gcattctaac aaagatttca ccggcatttt attaggtgat agcacatggt
     6361 aaatgatttg tggtgtgttg acctgtgcta atgcgacaat ttgtcttgca gtcgtatcca
     6421 caaaagaaaa atctacaggc atttcagcga ggctaacccc gatacaattc agttgtaaca
     6481 aatcattcat taccattgaa aaacggttag tctttatatt tctcatatgc catcttccat
     6541 tgtaaggact cgtcaaatta ccaacacgta caatccgtcc atctaagcca ttatttacag
     6601 cttctaatac ttttaattcg ctataaaatt tactccgtgt atatggtgat gttagtagtt
     6661 gtcctttata gacatccgct tctgaaaatg tcacatcttc tgtgtctata tcaaaataag
     6721 ttcccacact tatcgtagac acatatatta accttgcatg atgttgttgt gccaaacgta
     6781 taacatcaac agtaccttga agatttactt tttcaaattc atcatcatca ccaaaatgat
     6841 ctgtacgagc acctgcatga ataatcgtat ccatgttttc tggtaaaaca acatcatcca
     6901 tacactcaaa atcaccaaca atgacttcaa tgtttgataa catcatttca accgtctctt
     6961 ctgaaaaata atcatttaaa ttcgtcatca acttatacca tgctatttcc tcattatcag
     7021 cacgtatgaa acaataaatg cgatgactgc atccttgtag tgcttcaatc agataagcac
     7081 ctaaaaaccc tgtagcacca gtcaatagtg tatttcctag aggtcgatga cttagactat
     7141 cctctaaaat acccaaatta taacgagtca taactatgtt ttgtaattcc gaaagattat
     7201 ccggtaatgc aactaatgat tgttgatttt ggtgcatata attaacaatc tgtcgcacgg
     7261 ttttatattg atataatgtc tgcattgaaa tatgatggcc aaatcgtttt aaatgcgaga
     7321 caactaacat cgcctctaat gagttaccac caagttcaaa gaaatcatcg tcaacaccga
     7381 catcattttg tttcaatacc tctccgaata catcaacaaa tgtctgctca atttcattag
     7441 atggttcgct atacacttta ttagactgtt gtataggtga tggatttggc aaacgcgtag
     7501 tatccacctt gtcattcgtg gttaatggca tacaatcgat atgcgttata gtcttaggaa
     7561 tcatatactt aggcagatga tcatttaaat attgcttcaa atcctgctcc acttgttgct
     7621 ctccgacata ataagcattc aatatatcat gcgtatcaaa gtgacttact gtgacaacac
     7681 aatcagatat accacgaata gctaatattg cattttcaat ttcatcaagt tcaatacggt
     7741 acccgttaac ttttacttgt ttatctattc ttcctaaaaa ttcaatttga ccatcagaag
     7801 tataacgtgc taaatcacca ctatgataca actttccttt accaaatgga ttattttgcc
     7861 atttttcagc cattaattct ggacggttaa tatatcctat cgctaaacta tcacctgcaa
     7921 tacacaactc gcctggcata ccaataccgc ataacaaacc atctgacata atatacactt
     7981 ggatgttaga taagggtttg ccaattggaa tcgtctcagg tatcaaatca ccacattgat
     8041 gtgaccaata cgatgtgatg actgttgact cagatggtcc ataggcattg aaatacgtgc
     8101 cacaatgctt ctcaatatat ttaacaaagg atgccgtact agttgccccg cctgtaatca
     8161 atttttcaat ataaaagttt tccataacac tacacatctg taatggaatc gacgcaaccg
     8221 tcacacgatg cttattaatg agttgttgta actgtgctgg attaacacgt tcctctctat
     8281 ctggaatcac aagcgtatga ccatttaaca aacaacaata aatctccata actgatgcat
     8341 caaaaacaat atttgcatgt tgcaaaaata cttcattgtc gcctaattgc aattcagttg
     8401 accatgcatg cactaaattc aacaaatttc gttgtcgtat ggcaacccct ttaggcatcc
     8461 cggtcgtacc agatgtgtaa atagcataca tctcattatc taacatcgct gtgttttcaa
     8521 gttgatcgcc atgtaaatca tcatattgtt cattttcctt tgattcaaca aaacctttag
     8581 cattttccaa ttgaatgact ggtaatgtcg tttcaatttc aatgccgtaa gacatgactg
     8641 cagttacttt agcatcctcc aaaattgcgc cttgtcgctt tttcggaaaa tcaatatcga
     8701 taggtatata agatgcacct actttaactg tcgccaacat cgccgcaatc atttcaaaac
     8761 tacgttctgt aaacaaggca acccgttgac cattgcccac accatttgat aggagcatgt
     8821 gcgcaatggc atccacatag ttacgtaatg tttcatatgt cattgtcaaa tcattcatga
     8881 ctagcgcaac atgattacct tgtcgtgaaa caacttcatt aaagtaactt atgatagatt
     8941 tatttcccgg gacattaagc attcgattgt taacatgcgt attgacccaa tttagaagtt
     9001 cctccgtgcc gtttggtata tcacaaattt gtagtgtatc ttgatgcttc aaaatataat
     9061 caatcataat catacattga ttccccatgt gacgaactgt ttctgagtga tataaatcgg
     9121 tattatactc gatattgatt gtatagtcat cgcgatcttc ttcaatgatg aaagataaat
     9181 caaatttcgc cgtcaccgat ttgtgttgaa tgtgtgttaa tttactatgc ccaaaatgag
     9241 catgattcgt ttcattgttt tgtagtacta acatgacatc aaataatgga ttccgtgagg
     9301 catcatgtga ttgatctaag tcatttacta agcattcgaa tgggtattct tgatgctcgt
     9361 atgcctccaa actcatttcc ttaacctctt gtaaaaactg tgtccatatt ttatcaggtg
     9421 acggttgccc tctatatacc aacgtattag caaacatgcc tagcatttgt tccgtgcctt
     9481 tatgcatacg cgcactcatt acactaccga caacaacatc atcttttcga gcatatctgc
     9541 ttaacaacgt catgaccaca ctcataaaga acataaaatc agtaatttga tgcttttcta
     9601 catacttttg aagtagctgt ctcgtttgtt gattcattgt aaatgacatc attgctccat
     9661 ttgtcgtttt aatatttggt ctaacatagt ctgtcggtaa acttaaaata ggtacttcat
     9721 ctttgaattt agataaccaa tattgtctat gtttcgtcat atcacgatgc gacatccact
     9781 cactatagtc tttatattgc aatttaagtg gtaacaataa tttatgttga taaagtgcgt
     9841 taagatcatt cattaattgt atattactca taccgtcatt aatgatatga tgtgtatcta
     9901 taaacaggta tgcatgtaat ggacttctaa tgtatctcac tctaatttga cttggctttt
     9961 ccaaattaaa aggtgccaca aattggcgca tgatttcttg ttcatccgta aaatgcgtgt
    10021 taacttcttc aaagtcagct acaacatctg ccacaatacg ttgtcgaacc tcatcatcta
    10081 caacaatata ttgtgttcgt agaatctcat gtcgcgctat caaatgctga actgcttgtc
    10141 gcaattgagc tacattaagt tctgatgata accgccataa aaaaggtatg ttatacaccg
    10201 tatctttatg gtttgatttc cataataaat acattcgctt ttgtgcagag ctcaacacat
    10261 aatcatcttt aactatagct tcaggaatca cttcatagtt ttgttcttga accttagcaa
    10321 tcgcttgcgc tagttcaaat acagttggct tttgtaataa atcaccaatt tgtaatcgtt
    10381 tcccagtaga tgcctctatc cgattcacca ctaacgttgc ttttaatgaa tggccaccta
    10441 attcaaagaa attatcatga atacctactt gattcacatg taaaatatct gcaaaaattt
    10501 ggcatagcaa gtgttcggta tctgtactcg gtgctacata ggcatacgta tcaacatagt
    10561 ccatgatagg caatgccttc ttatctaatt tcccattaat agtaatagga atttgctcaa
    10621 tatgcataaa attaactggt atcatgtact ccggtaaggt catacgtaat tgtgatttaa
    10681 tcttattatg tgataatgta tgcatcgctt cataataagc aacgatatac tgatcttgat
    10741 catgattttg aacaataaca acagctttat taataccttg tatgcgctcg agcgcatgct
    10801 caatctctga caactcaatc ctaaaacctc gaatcttaac ttgtttgtcc tttcgatata
    10861 aataatctat gttgccatcg ggtaacaaac gaacgatatc accacttcta tacatcagct
    10921 gatttatatt tgaatctttg ataaatttat ctgctgtcaa ttctggctga tttaaataac
    10981 ctgcagctaa cccaaagcca cttgtacata attctccagg aataccaacg ccacatcgac
    11041 gctcgccttg catgatataa acatgagtac caagaatcgg tttaccaata ggaatacgat
    11101 ttggaacttt gttaggtata ttatacgtcg ttgtaaatgt tgtattttca gttggtccat
    11161 aaccattaat aatttgagga tgcttcggtc tttgattaag caaatccacc cacttagcat
    11221 tcaatacttc tccaccaatt aataaatact ttaacggtac caatacttct attcgttcac
    11281 tagcaatctg attaaataat gaggaggtta accacatagt attaacgtca ttttcattga
    11341 ttaattgttc taacgctatt ggatttaata attgttcttt tttagcaaca atcagttttc
    11401 caccattgag caatgcacca tatatttcaa atgttgcagc atcaaaggct atagttcctg
    11461 ataacaaaat cgtcgtctct tcatttaatg gtacataatg attttgatgg accaagcgaa
    11521 caatacctcg gtgcggaatt agtgtccctt taggtttacc agttgtcccc gacgtgtaaa
    11581 taacatacgc atgatcttct aacgtgttac atttagaaag attgtcaata tttttccacg
    11641 ctatcttgtt caaatcaatg tgattaatat tttgtttact attttcatat aaagcttggt
    11701 acgttattac aactttaggc gttgcatctt ttaaaatgta ctcctgacga tcacttggat
    11761 agttcggatc aattggcacg taagccccac cagctttcaa cacacctatc atcgctatta
    11821 tcatctcaat acttttttca gctatgacag cgacacgatc cttaggttca acaccgtact
    11881 ggtttctcaa acggtgtgct aaatcattcg cgcgtgcatt caatgtttga tatgttataa
    11941 acactccgtc aaattgcaca gccacatgat tcggcgttgc ttcaacttgt tgctcaaata
    12001 aggtaacaac tgtttgcgca tcatctatct caggcaaatt taaattgata tcgtcatata
    12061 attgaatatc acgttctgtc atcaaattaa gttcatctac agttgttcgt tcatttccat
    12121 tttcttcagt aatttgcaaa taaatattac gaactaagtc actcagcgtc tcgattgaga
    12181 gcaaatcata tgctgcactg ttatatataa ttttgaaccc gtgttgatgt ggaaaaattt
    12241 caatatccgc taaagatgta tgtgcatcat gtatttgatg tacatcctca ataacatcat
    12301 tacaacaagg catcatttga tgataacaat gaaaaatagt ctctaatgaa agcgaagact
    12361 tcgcgcactg taattgcgac atattttgca acacactttt attaaaatct gatgtaaaac
    12421 gttgacatac atcttttgca tcgattgtta acgttaatgg cacaatattt ccgtgcaaat
    12481 catttggtaa atgtgatggt acatgtatac ctaatgtgac atcatgttgt tgactcatta
    12541 tatgattagc taaatacaca ctaacagcca acgatgccat atctattgat gtcatatcat
    12601 caatcaaata cgtttgatat aaagcttgct caaatggatg cttaattggt aaataactat
    12661 caatatggat gtcagagtta ttctctaacc gaaagtagtt tgagtctaat gctatatgcg
    12721 atgcatcttg attgtcttta tcatcatttc tatttaaatg tgcatgctgt cgagtattgt
    12781 taataacagt attgccacga tatgcattgc ataaatcatc aagaaaaata tcaatttgac
    12841 tatcatcgaa aatggacaca tgaaaatcta atagtatata tgcagcatca gcgaactgaa
    12901 acaatttaaa tttgaataaa ggtgaatcat taaaatggta agtacttaat tcttgcttaa
    12961 aaaaagcttc taaatcatag tttgcggaag aagatggaac ttgttttatc tcaataaaag
    13021 gcagaaattc atgaagtttc attgttagat tgtcatcggt agtaacatca aaaaaatgtc
    13081 ttatagatgc atgttgttgc acaattgtcg ataatgcata catcatttta gtagcttcaa
    13141 catttttagc gagtttaacc caatacgcat tacggtgtgt cgttgattct gtattatttt
    13201 tgtatatacg aaaatattcc tgttgaaatc tcaaattacc cataatcata aaaagtcctt
    13261 ctttcatatc ataatactca ttacttattg aaattgcatg atgatatgat aactgacgaa
    13321 atgttaatta actcgttatg taatgattaa tataaaacac cattcgcaac atatgagcga
    13381 tatattctac cctaaaatac atcttgtatc atcgttacaa ttggtatatt tttcaatgta
    13441 aattacatac atcttcgata aatagcacac tacaactcgt taatcacttt ctcttgttca
    13501 catctcattg caaattcaat attgttgtta caaaatatcc atgaagcaag tttatattaa
    13561 acaaacaact cgcataaaac aattgttatc cttaaatttt aacaaattct taataaattt
    13621 atctctattt taatcacgac caaattaata ggttttcaat ataaagagac ttattaaata
    13681 aatgtttcag caaattcaat ctatgcttac tttctttcgt cctctaaata cacctgtaac
    13741 aagtaacaaa gcacccatta ctaacaagat aaacatacac agccccattt gtaaggaggt
    13801 taagaacaca cccaagacaa tccctaacct cgctaatgtt tccgacatat gaatacctaa
    13861 tgcatgaaaa gcactatatg tccctctttt atcttctgga ataattttaa agcgttgctc
    13921 ttcaaatata ggcgaataaa cgatttcgcc tatagtagca atcatcatga ataagatgag
    13981 caagctaaat tgattgagat acgtgattcc actataaccg acaatataaa atagtaaacc
    14041 gaacactaaa gctattttaa aatctatttt taatacaact tttgaaataa aatacgtgag
    14101 tacaatgaca ccaatagtat tggtcatgag taaaattgct aacatctttg cccctgtaat
    14161 atcataagga cctatgctga tggtctcaaa ttgatctttt aatctaattg caatatacga
    14221 agatgttgag aattcaccca tcattaaaat actgaatcct gaaatcatta acatatagtt
    14281 tcgatctttt aaaactgatt tataactacg caacactttc aaaatatgaa attgttgata
    14341 aaaaggcgtt tgcgcattag caacagttcg tactgattga ttttggtctt ctggcaacca
    14401 aatatataaa atcaccagta caattaaaaa aatacatgcc gcgactaaga aaagtatcaa
    14461 catactatga ccatagatta atccacctaa caaagctccg atagcaaccg ataagttcgt
    14521 aatccaataa ctcattttgt aaatgtaatg ttcaacatct tccgttattg catccataat
    14581 taatgtatcc ataactggaa attgcaagcc ccaaacgata gtgaatatag cgtatgcaat
    14641 gcaaaagcag atgatttgcc atagctggtt agagctaaat atgcccatta acactaacat
    14701 aacaaccatc gtcaactgat aaatcagcac gagagacttt tttggaaata tttcgataat
    14761 atagccagaa ataatagata acggaaactt caaaatcact aagacaacaa gatatatgcc
    14821 aacgatagat tgatttaaca tatcagttaa atataatgct ataaatggga taaacgctgt
    14881 cgtaataatc aattgtaaaa aattactaat taatcgtact ttcaatgttg tacttaatcg
    14941 cttcattgat aactacacct cactcgacat gtataaccaa ctcaatattt atggactcct
    15001 gatttttcac gtattttcac aaaaattgta catttcactc aagacatact cgttcaactt
    15061 cttaatactt atttaattta tgactatata gcagtagttg atgcgggggc cccaacatag
    15121 agaaattgga acaccaattt ctacagacaa tgcaagttgg ggtgggggcc ccaacacaga
    15181 agctggcgga aagtcagctt acaataatgt gcaagttggg gtgggcccca atataaagaa
    15241 atactttttc tttagaaatt agtatttctt atgcatgagt tttactcatg tattcctttt
    15301 taagtacaca ttagctgtgg ctaatgtgta agaaccacta cataatagat catttgtgat
    15361 tctttatcat ttctatccca ctctctaatt atatattatt ccagatgatt gaaatttatc
    15421 aataattgcg taagtgaaca catatgtgcc cgaacgttgt attataattt aggcgcttaa
    15481 ttttaaatgc gtaatcgcac taaaaaaact actaccatct ataaaacggt agtagttttc
    15541 gacgaataaa attatgcacc atcttaattc agttagctat tcaactctgc ttcaagttta
    15601 cctaaatgtc ttaatgttgg tgtcaatgct gcgaagaaga atccttcttt taacttgcga
    15661 acttgtggtg aatatggtgt gtatgctctt gagccaccat tgacaacaga agcttgattc
    15721 acatctaaca ataaatagcc gatgtccttc ttcaatgata ttaattcatt taaatgtgaa
    15781 gttaagttac cgtcatctaa tattgcataa tattcctctc taagttgacg ataacgtttt
    15841 ttaaaagctt caacatcata ctctaaatat tgatttattc cgttttgcgc atttgaaaat
    15901 gcatcaatta actctaaaga acttttaatt gagcctaatc ctattggaat ttggtaagca
    15961 ataaattgcg ggcgaatagt tgccgcaaat tgcttcgcat catgcgtgat aatttgtgat
    16021 tgtggcacta cgacttgatt caaagtaatt tgatacgttg ctgagccgtt tacccctaaa
    16081 aaatttattt tttcaacaag agtgatacca tcttgattgg cacgtagaat gaacattaca
    16141 aagtcatctg atgattcatg cttcgaaatc gcaccaaaat aatggtcttc ttgaatatta
    16201 cttacagctg gcatacgtcc actgacaacc aattgtccat caacataagt gtgttcaagg
    16261 ttcaactttt ctaaatcatt aaatgacttc atcggattag acaatccggt agcacctaat
    16321 atttctccag ataacaattg ctgttgtaag tcattattta aatgtggctg cgtggcattt
    16381 tctaaatacg ttgaaaaagc caattggcac cataaacaaa aacctgttgt caaacaagat
    16441 tgcgatacag cttcgattac ttcagcattt tttctcaatg ccgcctcacc gaaataacca
    16501 tctacaaata attgctgaat aaatgttctc ggataatacg tcccttcatc aacttctact
    16561 aaatgaggat ctaattgttc tttgataagc gtttctaaag tcatcatcat ctctccttat
    16621 tcaccaaatc ttctaagtat aaactgctca atataactaa tgaatcgatc aataataaaa
    16681 ccaaataatc cgataaagaa tatcgctgct aaaacatctt ctaagttcaa catatttcgt
    16741 gcatcaacga tcaaaaaacc taatcccgat tgcgcaccaa tcatttcacc agaaactaaa
    16801 aatatccaac ttgttcctac cgccatatgt atcccagcca tgatttgttt aaatgccccg
    16861 ggaaataata tattgcgata caatgaccac ccagttaaat ttaaatttgc tgcaattttt
    16921 aaatattggg gttcaatgtc tctaactcct ttaatggtat tgaacactat tgggaaaaaa
    16981 gcagcgataa aaataatagc aatcgctggc aaactaccaa taccaaacca tagaacaaca
    17041 aatggtgccc aagctatcgg agatatcggc ctaatcaatt gaaatagcgg ttcgatagcg
    17101 ttgtatagcc aacgattcct tccaagcaag aagcccaatg gaatagcaac caacaatgcg
    17161 acaacaaagc ccgctacaaa tctccataaa ctaattgcca aatgttggaa aatttctcca
    17221 gtaacaatga aagtccaaat actttttcct acaagagcag gaccaggtaa caatacaggt
    17281 tggtaatgcc caataataat gaccatttcc caaatgccta agaaaataat aaatgtgata
    17341 ataggtaata taattttatt aattgtgaga cgtgtcatga acgtgatgcc tccttataca
    17401 atgacggttc aacaaagtca tcatatgcag gtggattaaa caaatgatgt tgttttacta
    17461 atgtcgtaat ttcttgatag ccggatggct taattgttaa atcaccatag gatgtccatg
    17521 ccgctgactg tgttaaaacg tcacgacttt gtttaaaatg atgcgtcata atgtctacac
    17581 ttttcttgcg atcattcatt ttaaagccag aatttttata atcttttaca aatgcttgcg
    17641 ctacatcctt gtgttgatca agcaattcgc ctctcagtac tagcacacag caatacgcat
    17701 caggtataac gtcatcacca tgtttcaaag tcttaccttt gcctaacttt tcacccagtg
    17761 caccaaatgg ttcggctaca gaataccctg taattctgtg ttcacttaat gcggctggca
    17821 tctccgctgg cgacatttca tgatagctga aatgacccgg ttcaactttc aattgtttac
    17881 gtaattcctc aagtaaaaga taatgtgttg aataacgatg cggtatacca aaatggtaat
    17941 catcgccagt attattaaat tcatttaagt gcataccttt ttgtcccata atgacattac
    18001 cttcatgatg acccaatgcc acagccttta tattcgagcc cttctgcttt gatttcatcg
    18061 cgagctctat taaagttgat gcaccatcaa tacgaccact gtttaatgcg tccattaaat
    18121 ctggccaatt attgaattta actaattcta gtttgtattt cggatgattg tgttgtgata
    18181 ataatttttt agtcatcatc aaattagctg aatgtgtaat cggcaaatat ccaattttaa
    18241 tcacttgctg ctgttggaca tttttagacg gttctttaga cgtcctttgc caatcacatc
    18301 ctgtaattat aaagattcca atgatgacga ttatgcttaa ccttttcatc gtcactcact
    18361 ccttataaat aatattcagg ttcaacttga tgatgattca atgcaaatgt ttccataata
    18421 tcattacgaa tcttaagtag gtggctatca ttacgactgc gtggatgtga tgctgtaata
    18481 tcatattgcg aaataatatt gcatccttct cctaatagaa caatgcggtc ggaaagataa
    18541 atagcttcat caatatcgtg agtgactaag ataatagttg attccgtttt gtgttttagt
    18601 tgcactagtt gatcttgaag tttatagcgt gtaaacgcat ctaatgcacc taatggctca
    18661 tccatcaata taacgttagg cttatgcaca tgcgctcgac ataatgctac acgttgtttc
    18721 atacctccgg acagttgctc gggaaaatgc tttcctctgc cttctaaatc aactaattta
    18781 agctgtgcgt taatctcttc atcactaatt ttctgttgga atccaatcct aatgttgtca
    18841 ttaatcgttt tccatggcag cagattatga tgttgaaata gcattaaaca atctggagac
    18901 ggctgttgtt taatttcgtt atcaataatg acacgaccag atgatggata aataaatcca
    18961 ccgatgatat tgagtaaagt agacttcccg caaccacttt tccctataaa agtgactatt
    19021 tctcccttgc taatctccaa attaaagtta tgaattactt tatgtgatcc aaagtgatgt
    19081 tgtaattgtt gaattttaat catgacaagc ccccttttaa tccctaccgt tttaataaga
    19141 attaaatgta tatctaaagg gctatgccaa acacagccct tgaatcgtga attgttatat
    19201 ctatagatga ttatggtttg gtgcgagcgc tcttataaca taagcgttat tcaattaacg
    19261 acgttatatt aatttcagct ctacaaaatt tcaataaaat gattgtttta gccaataatt
    19321 gcatatagtt cattagtttt gccatatcaa ctacttacat ttatagcatt gagctattct
    19381 aattaactgc catcgtaatc cacgccaaac ctatatacat atatctcatc aatttgttgt
    19441 cttattaaag tttttcgatg ccatcaatcg gtgtatcaac tgctttgcgc gcgcgacgta
    19501 ccgcttcttc atcaggtgcg ttgtataaac aaatacattt agacatatct tcacatacat
    19561 atgtgcgttt aaattcaact tctggtactt cttcataatg aacagaattt ttctttttac
    19621 gtgctaaata ttgatccatc gtaatgcctt ctggaatgtt ccaagttaca aggtaatcaa
    19681 catgtgcatc accattttta acttcatcta aatcttttcc aactaagcga acttctttga
    19741 ctaattgaat actaatacca gcttcggtta aaaattgttt agcttctgct tcgtcatttg
    19801 cttctacaat aaaataacca tgagttaaat tttcagtagc ttgtacttca attaatgttg
    19861 gaattgtctt cgtagatagt gatgctgcct ttgcttctag ttcttctttc gttgatgcaa
    19921 aatcaagatt gttagcttct aataaaaata atgtcattaa taagacctcc tataacaatg
    19981 gttgaaaaaa tattactata attcttatca gattacaagg atattgagcg atttttttaa
    20041 atatttagat aaaattctgt aaaatatatt ttcaaagagt ataaaaatca tgttagggta
    20101 taagtaaata aacatatata tagggggcta tcattatgga taaagaatcc gtcgtagcaa
    20161 gtttagcaag aaacaaaaag attgctgtag aaacaatggc cggtcaaaga tacatcatag
    20221 aacgcatttt acatacaaat gatgaaaaac atattcatat tttgaaacct aaagatgtcg
    20281 tgttagatgt agatagcatc aaagaaattg acgaaaatca tttaaatgat gcaacataat
    20341 ccaaaacgaa acgtgcgcct gagacatcaa tcaatgtctt aggcgctaca atgttttatt
    20401 tatgttaatt tgtcgaagta tggctcatct aatggattca attgcaagtt ttcaatttgc
    20461 aacgttgaat gtgcaatgcc atatttttct ttcaacaatg atgatacttg atcaatcgct
    20521 tgataatcat cgccatcata ttttttatct aacacaacat gggcgcttaa tgaataatgc
    20581 tctgttgtaa tactccacaa atgaaattca tgtacatcta atatgccatc tatgttttta
    20641 atatctgcca taatttgatc cgtatccaaa tgttgaggca cactttccat taaaattaac
    20701 cacgcattgc gcgtaatttt ataaccacca cgtaaaatga tgagtgaaat tacaatacta
    20761 atgattgggt cgatgatgcg ccatcctgta aagtaaatca atacaactgc aacgatgaca
    20821 ccaatagagt tcaataagtc tcccatgaaa tgccataatg cactttgaat attgatattg
    20881 tcttcttgtt ttaaagacct tacaaggata acagtcaaaa taatattgac gagtaaacca
    20941 atactagcaa tcataaacat aatgccactt tcaatgggtt gcggataaat aatacgtaca
    21001 atagcttcat ataaaatcca gattgaaatt acaattaatg ctaaaccatt taaaaatgca
    21061 gctaatatct caaatcttaa atatccaaat gtgtatcgtg cagtcggctt cttacttgca
    21121 aaataaatgg ccaacatgga taaaccaagt gctaatacat cactaagcat atgaaatgaa
    21181 tctgacagta atgccaatga attagatact aaacctccga caaattcaat cactgtaaat
    21241 aacaatgtga tgataagtga tgcccacagc gtctttttag aactttgttg aattttttga
    21301 tgattgacat gatgaaaata tttgtatctg tttatcgtat tcgccttttt cccattcata
    21361 cgtttgccac tcctattaat gcgtcgtatt taatattgtc gcttttaaaa ataattcttt
    21421 atagcttctc agattaatat taatgcttac gtaattaacc atgatttata caccatcgtt
    21481 cttcacatga caactcatta atccttaccc tttatacctt tatgtaatat caccttggaa
    21541 aaacttttac agcacactcg ctctttgctt tatccctatc atatagaaat ttttaataat
    21601 gtacgtgatt attgtgttag ttacataaaa atgacaaaaa agtatctcaa atttattgtt
    21661 tagtttcatt aagttcaaaa aatcgcaata actttaatga ttgttccgca tattaaaaca
    21721 aacgatgact ttgcatatag aacttcacat ttctaaatca ccataattaa taaacaactc
    21781 tgtcctaatt atagccgcat cgcaaattag cgtaattaaa aacagcagta agatggtttg
    21841 caattaaaaa ccatcctact gctattattt tagtcattat atcctaatat cattatgcat
    21901 gtacctaaat atttggtttc gcttaaaatc taaacaactc cgtaaacatg ctaagactta
    21961 ccgctagact gcctacaaac acgcttcaga aacgctattt attctagtac aaacctttta
    22021 aagcattgct tgtatcaata taaatatttt taacttgttg atagttactt aacgcacctt
    22081 tataagtttc tcgaccgata cctgattttt tataaccacc aaatggtgcg ccttctggta
    22141 cttggttgta agtgttaatc caaatacgtc ctgtacgaac agctttagca atatttaatg
    22201 cacgtgtgat attttgagaa aatacgccgc cagctaaacc atactctgaa tcattagcta
    22261 tatcaattgc ttcttgatcg tccttcactt taatcactgt taaaactggt ccaaatattt
    22321 cttcttgcgc taatttatga tgattatctg gcacagcaat taatgtcggt tcaaagaaga
    22381 atcctttatc taacccattt tcagttaaac gatgaccacc tgctaaaatt tgtgcatctg
    22441 attcttttgc tgcatcaata tatgattgaa ttttatctaa ttgatcctta ccagtttgac
    22501 tacccatttg tgtagcttca tcttgtgggt ctccaacttt aatatttgaa aatgcctctt
    22561 gtaaacgtgg caccaattga tcataaattt tttcatgaac taataatcga gaacctgcac
    22621 tacatacttc accttggttg aataaaatac ctaactgaat accttcaact gcaaggtcta
    22681 aattagcatc atctaatatg atattggcgc ttttaccacc aagctctaat gtagcgggta
    22741 ctagatgctt tgctgcagct tcggcaactt gataacctac atcagttgag cccgtaaatg
    22801 ataatttatc tacaccatca tgattgaaaa ttgcattacc tgattctgaa cctttacccg
    22861 ttagtatatt gacaacacct ttaggtaata cctcttggaa aattttagca acttccaata
    22921 aacttaatgg tgttgaagac gaaggttgaa tcacaattgt attacctgca gcaatggctg
    22981 gcgcaatctt ccatgcagct aatagcattg ggaagttcca agcaacaaca gcacctacga
    23041 cgccaatcgg ctcatgtcgt acgatactca ttgtgtcttt atcgatatca ttcactgtac
    23101 cttcttctgt ttcaataaca cttgcgaaat aatggaaatg tcttgcagca aatggaatat
    23161 caattgctgt tgtctcacga atcggtttac cattatttaa tgtttcaatc attgcaattt
    23221 tatctttttg tgccattaat ttatcaccaa tatcacgcaa catttgtgca cgttctgatt
    23281 tagaagttaa tgaccatgtt tcaaatgcct cttgcgccac ttcgacggca tgatcgacat
    23341 ctttatcttt tgctcttgta atatgtgata gtgtttctcc agttgctgga ttagtcactt
    23401 cgattgtttc gtcactgcta cctttaacaa attccccatt gataaataaa ccataattct
    23461 ctgcaatata atctcgaacg tttactgcca tattatctct cctttgttta ttggctataa
    23521 tataaatctc ttagcatcat atttaataat gcttttaaac gatatgattc acattatata
    23581 gtaagcgttt acattttata aaataatcag ctcacagaag tctcattttt aaaacttttg
    23641 cgtcgttttt gcacataaaa ataatcttat tttcgaaaac atattgcact tttcaaaaat
    23701 aaaacacata atataactat aatacttgag aacaattctc attaaatagt ttatttgtta
    23761 tgaaagtcgc acttaaaatg cgttaatggg acaaggataa ttcaacaacg tttcatttta
    23821 ctgagtcatt gcacttatca tacacattat atttagcatg atttatatta ctaaaacaat
    23881 attacatgcg cattagtact agaatggagt ttttacaatg cgacttattt taatcgtcat
    23941 tggcttaata tttacagcgc ttggtattgc aggtgccgta ttacctttac tgccaacgac
    24001 ccctttttta ctcgtagcag ttttttgttt tgctcgaagt tcagatcgct tttacaattg
    24061 gcttattaat caaaaaattt ataaagaata tgtagaaaac ttttatttac atcgaggcta
    24121 cacgctacaa cagaaaatta aaattttaat tagcttatac attgtaatag gtttttcaat
    24181 ttatatggtg gatgttcttg cagtccgtgt aggattaatc ataatggtta tcatacaaac
    24241 cgctgtactc tttacatttg taaaaacatt acccaaatca aataataaaa tagaggagtg
    24301 attgcccatg tttatggcag aaaatagatt acaattacaa aaaggcagtg cagaagaaac
    24361 gattgaacgt ttttacaata gacaaggtat tgaaactatt gaaggcttcc aacaaatgtt
    24421 tgtcactaaa acattaaata ccgaggatac agacgaagtt aaaatcttaa ctatttggga
    24481 atctgaagat agctttaata attggttgaa ttccgatgta tttaaagaag ctcataaaaa
    24541 tgtacgttta aaaagtgatg acgatggaca gcaaagtcca atattatcaa ataaagtatt
    24601 caaatatgat attggctacc actatcaaaa ataaacatat taaaaacccc tagtcaccgc
    24661 tggttgtcta aacctacttc atgattaggg attttttatt atttgtgacg taaaggtacg
    24721 aattcatccg gcttgtctga acgcaatcca aaataatatt ctattgcttc acaaatacgt
    24781 cgtgatgctt gtccatcacc atatggatta ttcgcttgac tcatacgttg atacgcttca
    24841 tcatcctcaa tcaattgttt cacatttcga acaatattgt cataatctgt gccaattact
    24901 ctcgatgttc ccgcctcaac gccttctgga cgctctgtat gattccttaa taccaacaca
    24961 ggttttccaa atgtaggagc ctcctcttga ataccaccag aatctgtcag cacaaggtac
    25021 gattgatttg taaaattatg aaactcaatc gcatctaatg gctcaattaa ttcaatccga
    25081 tttctcccag ataaatattt ttcggcaatc gctcttacct ttggattacg atgcattgga
    25141 taaatgaaga caacatcttt atattcatct gccaaatctc ttactgcttt aaaaatctga
    25201 tgcatcggtt ccccaatatt ttcacgacga tgcgctgtta gtaaaataac tttcttgcct
    25261 ttatgtttat taataatcgt tgaaacaaaa tcattttgaa ctgttgttga caatgcgtca
    25321 ataactgtat ttccagtaat aaagatactc tctttgtctt tgttttcaaa aagtaaattt
    25381 ttagctgcaa ttactgttgg cgcaaaattc aattcagcaa tattactcac catgactcga
    25441 tttaactctt caggaaatgg tgagtatttc tgatgtgttc gaagtccagc ttctacatgt
    25501 ccgaccggaa tttgatgata aaatgctgcc aaacttccta caaaagtcgt tgtagtatca
    25561 ccatgtacta aaatcatatc cggctgttcc tcattaatga tgctatcaag tttagcaagc
    25621 gcattcgccg taatgcccgc taacgtttgt tgatcttgca taatatttaa atcatgatca
    25681 gcttgaatat caaatatact taacacacta tctaacatat ctctatgttg tgctgtaatc
    25741 acaatattcg cttcaaagtt cccattatga tcaatttctt ttactaatgg tgccattttt
    25801 attgcttcgg gtctcgtacc gaaaataacc ataatttttt tcataacatt atcctctctg
    25861 aagttcaaac acatgacagc ttatctttcc ttaatcatgt atgccctagt ttgacacatt
    25921 ttatttgtcg ataaaattaa atatattgcc ataattataa tacgatacat cttcaaatga
    25981 tgatttcaca acattttttg tatcaaaaat cactttatgc ttcattttat caaaatgact
    26041 gtccgataaa tttttaaatt ctgagtggtc acttaaaatc aatactagcg atgcgtcttt
    26101 gacagcatgt gacatatcat gttccacaaa atctaattca acatgtggat cataagcaca
    26161 tacctctatg tctggttctt gatttaatag ctcataaata tcaaatgctg gtgattctct
    26221 tatatcatca acatcacctt tataagttaa accaaagact gtgactttat tcccactcaa
    26281 cgctttgatg atttgcttcg ttgtatcaac aacataggcc ggcattgaat tattaatttc
    26341 acgtccagtt tgaattaact ttgcattttc agggtcttta gcaataataa agtacggatc
    26401 aacagctaaa caatgaccgc ctacacctgg accaggttga tggatattaa cacgcggatg
    26461 tttgtttgcc atttcaatca catctaatac attaatattt aagttattgc aaatttttgt
    26521 taattcatta gctaaagaaa tgttcacgtc tctatatgtg ttttccatta gcttactcat
    26581 ttcagcagta cgtgcatctg tttcaatcat ttctccctga acgaatgtgc gatagacacg
    26641 tttacccgct tcaatacaag ctttagtcac accgccaatg atacgattgt tatgaactaa
    26701 ttcttctaaa atttttcctg gcagtacacg ttctggacaa tgcactaaat aaatatctac
    26761 acctattgta aaccctaaat tttcaatgac tggttttaca aaatcatcca tcgttttagg
    26821 cgcaattgtc gactccacaa taatggtatt tcctttttct aaaaatggta aaatactatc
    26881 taatgcacgc ataactagcg aaatgtcaca tgaccggtac tgatcatcat tattcggcgt
    26941 cggaacggca atgataaaaa catcagatgc ttctggcgtt gtagatacct ttaattttcc
    27001 cgatgacagt acctcttcat aaacctcttg taatccaggt tcttcaatac taatttgacc
    27061 actttgtaac ttatcaatcg tttgctgatt aatatcaaca ccaagcacat cgacgccatg
    27121 ctttgcaaac ataattgatg ttggtaaacc aatataacct aagccaacta ctgttaactt
    27181 catactataa cctccaaata aaacgatttg tatgttgatt ttatttaata gatgacttat
    27241 gccttatctt tggttgtcgt ttcatccatg atgtccgcaa taacaagtga catttttcca
    27301 ggaataactt caagtgcatt attattttca tataacgtat tgctgtatgt taaattgccg
    27361 aataattttc taaataccga caacttatta aaatacttat ttagcattga aggcatgttg
    27421 atcaataccg ttttacgatg tgattggcga cgtatttcat acattactga cgatgtatca
    27481 aagtaaaaac tatcttgagg atgatacact cctgtcactt ctaatgatat taattgatca
    27541 ataaatgctg tcagatgttt aatatataat gcactgcgct gattgttaat atttggaatg
    27601 attggcaatc gctttgacaa ttgcattaac cgttggaaat ttcctgggca atgtgcacca
    27661 taaatcattg gtggtctcac aattgcaact ttaaacgaat cactaatcaa cgcttgtaat
    27721 gcttgttcag cgaacttttt ggaaatacca taattggtcg taggattcat tggtgtttgt
    27781 gtatcaattt gatctgattt accaacctga ccttcttttc cataaactgc catagtactc
    27841 ataaaaataa attgtttaat gtcttcagct ttagcctttt gtgccaattg tttcgtaagc
    27901 aacatattca cttgcatata atcagatagc cttgcttgag gtgaattgtt gtgaaccaaa
    27961 gctgctgtat gaattaaaac atcataatct ttgaacgagg tcgacttcca taattgattc
    28021 ctaacattaa tttgatccac ttgatgtcct tgttcaataa gcttatcttt taaagcatta
    28081 ccgatatatc catgtatgcc tgtaattaaa atattttttc tcattagtga tgcacacctt
    28141 ctgaagtaac gatattttta attgttttat atatgatata catatcaagc atcatagatt
    28201 gatgtgttaa gtaataatga tcatacgcta ctttttgatc atcagtaata tcatctctcc
    28261 ccatcacttg agctagccct gttacacctg gtctaattgt atgcacgttc gcttttgtac
    28321 gtttttcaat taattcgtat tgattataaa gagctggtct aggacctaca attgacattt
    28381 ctccttttaa aacattcaat aattgtggca attcatcaat agaggtctta cgaatgacct
    28441 tccctgtctt tgttatatac gatgttgaat ccattaaatc agttgcaaca ttaggtgtgt
    28501 ctattttcat tgatctaaac ttataaatat taaacaattc attattaatc gtcggtcttt
    28561 tttgtttgaa aatggctggt ccagatgatt ccattttaat tagtaatgct gtaattaaca
    28621 gaatcggact taaaactact aaaccatata ttgaactcac tacatcgaat aatcgcttca
    28681 taattatctc ctcacttcaa cagattgtaa tacttcatag tattaatttc tctcgtatat
    28741 ttatctttaa acagttgatg tgcgcgctca cccatctcgt gcaattcctt actcgagtga
    28801 gtgttgatga agttataaat ggcatgtgca tcgccattat caatttggat acccgcatca
    28861 tattgttcaa catgttgaac gatatcagat tgcttatcca tgatgagtac caacggtttc
    28921 ttagctgcaa ggtagccata attcttgctc ggaacgccta aaccgacgcc ttctttaatc
    28981 agcgatgcaa tacatacatc cgcaattttt aatacgtcag catagtctgt acctgttaaa
    29041 aactcaaaca ttttaacatt ttcaatacga tggtcttcta ttgccgtttt gacatctgca
    29101 aatttcttac catgaccaca aagtattgtt aacgtttgag gctgatcctt atttaatttt
    29161 aaaaatgaga taagtgtctc catatcctgt aactgcccca tattaccgct atacaataaa
    29221 attttgtcgt attgctcacg gtaagcttta aatgtgtcat tatagatacg attgtcttgt
    29281 aactgacgca tgtcatacca attaggaatc acatgaatat tatcaggatt tttagaaatt
    29341 tgatgattta ctaagtagtt tttcatttcc gtaccaagga caatgacatt ttcagcattc
    29401 ttgtagacat gtttattaat gtaacgcatc agtttatcaa tcatgctacc tggacgtgtt
    29461 gcacctgtct taatcgcatt atcaggtgct atatcataca ccacaaaaga atattttttc
    29521 ttaagcagtc tgtgtagaac gtctggtatt aatggcaaga ttggtggatt agagtaaaca
    29581 agaatctgat catatttcaa cattttaggt atattaatca cgaattttga aaataaacta
    29641 aagaaattga tgatccttcc aaccttactt ttgttattaa acctcgaata cttgagacgt
    29701 cgaatgcgaa taccacgatg catctcggtt ttagcaacct gtttatgatt actatattca
    29761 tatggccatc cacacatgac atcgacatta atgtgattcg caattaaatc ttccgccaat
    29821 tgagttggta acgtcgcaga agatacatat tccggataaa aatactgaca taaaatcaaa
    29881 atcttttttt cactcatcta atcgacgtcc tttttattaa tgaatttaga ctaagaattt
    29941 ttgaactgtt tatttttagc aaaataatag agtgctatga aaaatatcat gtacgatacg
    30001 attaaaacaa ctgtattaat agatacaaaa tttaaaaaag ttaaattaag catttttgat
    30061 ataacaaatg ttacagtagt acctattaaa aataacgctt gtagtattaa ttctaactgt
    30121 tgtttttgta atacaatcac agaaagtgat accgttgata caatcagtct tataacaaat
    30181 aatgggataa caatttttat aactgtaatt gcgtcaaccc agctgtgtcc taataatata
    30241 ttgactaatt cttcactgaa caaataaagt ggcacataaa gaattataga aactataacc
    30301 agtatggaac taaatttaag taataaattt cggaagttac catgctcaat ataatagtca
    30361 ttagcttgtt gcataaatat ttttgataac cctaaagaaa taattgtcac tggtatgcct
    30421 agtactctta tggccatacc ataaatacct acttctgtat tggtatacaa aatacctata
    30481 aagaacacaa caaccgagaa agacaaacta tttaataata ttgatggtgt tgaataaact
    30541 aactgatttt tattttctaa aaataatgct ttagtttctt ctttatctct cacaatatta
    30601 aagtgctttt taaacgtttt atatcctagt gtaatgcctg cgatatagga taatgaaaaa
    30661 ccaataatta atcctagact tcctaatgct aaaagtccga aaatgatttg aagtaaagcc
    30721 attgatccag ctctaaacac attaatcaaa cttaacactt tatattttct ttccttattt
    30781 agataatttg taaaaatgtt tgttaaactt accaaaaaca acataataat aatgaaaata
    30841 aaatctaata taaagtttgg gtataaccat gcactaatcg caaatattgg tatcagtatt
    30901 aataaaataa gcaatgatat caaaaaactg atttgtgaaa gtatattagc actacggtca
    30961 tttttggtat tcacaatcaa caaatcgtat cttgcattta ttattggtat taaaatcatt
    31021 gcgatatttg aaaaaattgt aaactcacca aattctgtag gtgaatatag tcttgtaata
    31081 attggggtag tgatgattaa tatgacttga gcgatgccac tgcttaaaat cattaagaac
    31141 gaatcgccaa taaatttatt taatctcata attaacctca gattttcttg atgactttcg
    31201 ctggatttcc acctataaca acgttacctt ctggaaaact ttttgttaca accgacccag
    31261 cccctacaat tgtatgttcc cccaattcta ctcctggtaa tataactgag ttcattccaa
    31321 tccaactata attccctatt ttgacatctt cacctggtgc atgtgacttc aaatttttaa
    31381 tattatgatt agctgtaata atacctacgt taggcgctat ataaacacct ctacctatat
    31441 atataactgc tgaaaaatta ttaaaatacg tcccgggcga ttggaaaata tgaatatcat
    31501 ttttatcaaa aacaatgtta ttagggttat gcattctaac agttatatct gcaggaaatg
    31561 gcaagctcgt atttattcct aacaacttga acggaacagc tttccatgcc cataaccatc
    31621 cagccacttt attttcaaaa taatatccag ttaaatattc tttcttataa aataataata
    31681 gtggtgtatt cattaatcta aatattttcg atttcataaa tgtttttaca atcattctat
    31741 ccctactttt ttagtaaatt tttttattat aatgcctggg ataatagcta taacatatac
    31801 aactaaaatc atagaaatca atgtgattaa tggtgtcggg tgactaaaaa tactcgtaat
    31861 aagtctcata taaatatatg taccgataaa tatcacttct aacgaatgac tcttccgaat
    31921 aatatactca ctcagaaatg caaaaaagat atttgcaatt aaattcaaat agaagaataa
    31981 gggtccaaaa taaataattc catatccagc actcgaaatt agatgcccag tcaattgttt
    32041 actaccatat atcaattggt taaaaagttg gctagtaatc aactgctttt tatctacaaa
    32101 gaaattaaac ccaaaaacag ctctagtatt atcaaataaa tattgtttga acgaaccatt
    32161 atagtaattc aaatagtcta tagaagctgc aatattgcta ggtccataaa aatatgactg
    32221 caacgtgtca actatcttaa gattacttac acttgtacta tttaacgcct cgctatatga
    32281 actataatta aacacataca attctttata tagtgtcatc aatgctaata cgaaaatacc
    32341 aacagatata ataatgatat tgatacgtct tttgtgttta gaaaacaaga gtgacaccac
    32401 tgttaaaaca gcaaccatcg tataaagttg ataacttctt ctttcaccaa caattaaact
    32461 aatatttaaa attcctatag ctagcggcaa tacaacataa ataattttag gattctcttt
    32521 atacttttta tatgaagcat atgcgattat taagaataat aacgctaagg caagttgaaa
    32581 tagcattaca aaaaggacat ttaaaccact tgttgcttcg gttcctcttc ccattgcatc
    32641 tgttttaata attaaaaatg atatgttttt gcgcacttcg ggaaaagcta caaaaatccc
    32701 acaaataaca agaccaaaca caatgtaata aattgatgat ccagaaagtg taaagctatt
    32761 tcttgatacc acttcatgtt tgaataattt agatagtatc aatataaata gcgatcctat
    32821 gataaactcc acactcatat aaataaccgc ttgattaaaa taagcttgtc ctaatggtaa
    32881 attatctata gttgaatcct ggaaaaacac tatcatagca ggtataaata ctaatctaag
    32941 aaaacctaaa acatcgtata caattttcga aaatttaaaa ttcggattat tcgagaagct
    33001 tataaagagc tttcctactc cataacttat aggtgctaaa aataataaag gtttatcacc
    33061 taacataagg caaggaaaca ttaaaatggc aataacatat gaagtgacat tatatatctt
    33121 attcattaaa tatcctgcct atctcttgat agaactgttt attattttca attacatcgt
    33181 ttctataagc ttctctttta tgattaatgt ccattacatc caaattgtta taccaatcca
    33241 tcaattcatc accaatacct tttaaatttt ctggattaac actaaaaccc agtccgaatt
    33301 tattagcttc tgtagcggtg aatgtatcgt ctgttgtaat aataggtttg tttaaaaaca
    33361 acgcataata cattcttatg gataaagcag tatctaaagc aatattttga ttaccaaaca
    33421 aattattaag tatatcaatt ttatttaaat attttggggt ttctttcaag tcaaaaccgc
    33481 cagaaaatgt aatattatta ataaaatttt ctcgagcaaa gacttctaat ttttccgacc
    33541 ctgttccaaa atattgcata tggaaccttg aatcatttgc cagttccttt atcaattttt
    33601 gatttatctc attaaatcta acattaccaa taaaacctat attaattggc catctttttt
    33661 tgaatccatc ggtcacatta ctttctctaa taatactcat gttataacta taaataattc
    33721 tatatttttc agatttaggt aaaaatttaa gaaaaccttc tgaagataat gttgtcagcc
    33781 tgctagcatc aacgattttt ttcattctat acttaataag tttattattt tcaaaaaagt
    33841 agtcccttat atttaaaatg aatttatttt tatagtgttt ttctaaaaaa cttttaaata
    33901 agtgtcctgt ataacttccc catactatga caaaatcata atgattttct ttaagaattt
    33961 tcatagcgta cggcctaaat cgatagtaag caatagcttt tttgataaat gtccaatctt
    34021 ctttaatatc tactttatat ttatagtaat tattgatgcc ttggatatgt tcttcgatat
    34081 catatttgtc agtgtatata atgtccacct cattgatatt caaatcaatg tggtttaaat
    34141 aatgtgataa taatgacata tgcttaatgt tagtagcgcc aagaatcgct atcctcatcg
    34201 tcatttcctc caagtatttc gattgataat atctttataa ctttgaataa ttttaactac
    34261 ttttgtcgaa acgttagtgt ctttataatc aatagcatca atcatcggtt cgttattgtt
    34321 ttgcatctct cttgctagtt caacggattg gattagattg ttataggtaa taccacctac
    34381 aataaccgta cctttatcta gtacttccgg tctttctgtg gaagttcgaa taaggacacc
    34441 agggaacttc aaaatagacg actcttctga caatgttcca ctatctgata gcacaacaaa
    34501 tgcatctttt tgcaatgcat tataatcaaa gaaaccaaat ggctttagct gtttaactaa
    34561 tggatcaaat tcaaatttac tttcttcaat tttcttccaa cttcttggat gcgttgaata
    34621 aatcacaggc attttatact ttttggcaat atcatttatc gcattcatta atgatttaaa
    34681 attcttttca ttatcgatat tctcttctct atgcgcagat actaaaatgt attgttgcgg
    34741 ttctaatcct agtttattta aaacgtcact gtgattaatt ttatctcgat gcgcttctat
    34801 cacttctgtc atcggtgatc ctgtcacaaa gatattcgct ttattgaagc cttcatctaa
    34861 taaataccgt ctgctatgtt ccgtataagg tagattcaca tcactgacat ggtcaacaat
    34921 tttacgattg atttcttcag gtacattctg atcaaagcat ctattacccg cttccatatg
    34981 gaacacagga atctttaagc gtttagcaga tactgctgct aaacaactat ttgtatcacc
    35041 aagaattaaa agtgcatctg gttgttcgcg taataaaaca tcatatgtct tcgcaataat
    35101 attccccatc gtttctccga ggttacttcc aactgcctct aagtagtggt ccggttgtct
    35161 taattccaaa tcatcaaaga aaatttgatt caatgtataa tcataatttt gaccagtgtg
    35221 tactaatatc tgattaaaat attgatcaca tgctttaatc gttgatgata agcgaatgat
    35281 ttcaggcctt gtaccaacta ttgtcattaa ttttagtttt tccatacgct atacctccaa
    35341 gaaatacgta tctggctgat ttggatcaaa catttcattc acccacataa tagttaccat
    35401 atctgtgtcg cctaaatttt caatattatg tgtgtatcct actggtatgt ctacaacttc
    35461 taatttgtcg ccagaaacgt aatattcaat gatttcatca tcattaacat gtctaaaacg
    35521 aattacccct ttacctgata cgactagaaa tttttcgttt ttagtatgat gccagtgatt
    35581 acctttagta atacctggtt tagaaatatt tacagaaact tgaccacgat ccggtgtttt
    35641 tataaattct gtaaaagaac ccctatcatc cacattcata agtaagggat aactaaagtc
    35701 tgtactaggt agatagctta aatacgtact atacaaatct ttttcaaaca agttatctaa
    35761 tttcggcaat gttcgatcga gacgtgactg tttgaacttg tataataaat ctacaatttc
    35821 tcccaatgtc actttaaata catttggtac tgtaggtaca ccattttcaa tcgttggatt
    35881 tccttcaata gcacgtttta tttcagcaat gatatcatcc acgtagttta gcgttagttc
    35941 aacgtcccga ttattaactt gaatctcttc gttacgtgca attttgtaac aaaatgttgc
    36001 tataactgag ttataatttg gcttacacca cttgccgaat aaatttggcc agcgataaat
    36061 ataaaccgta ttgccatact cttcggcata ttgtcttaat agctgttcac cttgcaactt
    36121 actctcacca taaggattat tttgtgttgc ttgtattgaa gacgatagta atatcgccgg
    36181 ctttttcgta tttctagtta atatatcaaa tacatgatct aaataactca cgtttcctaa
    36241 gctgaattct ttgtcatgtt caggtcgatt cactcccgct aaatgcacga caaagtctgc
    36301 tttcaacaac gctgactcta attcttcctc tttagtttgt cgatgtactt cgaaaatatg
    36361 atgatctgtc gttgatgtta aatctgcttt caagtttttt cctacaaaac cctttgctcc
    36421 tgtaattaca atattcaacg tcaatctctc ctatctcatt gaagctttat aatcattcaa
    36481 ttcgtttcta acatattcta gtgttaaaag tttttctttt atctcttcca ccgttaaaat
    36541 atgtgtatta tcggagttat attcataaga ttgcgtaatc ttttcgttac cggtttcaac
    36601 ataattacta taatttaaat ctctggagtc tgccggcact ctaaaataat cacccatatc
    36661 ttcacattgt gcgtattctt ctctcgtcaa caatgtttct gcttttttct ctccatgtcg
    36721 cgtaccaatg atttcaattg cattatcagc ttcaaacaat tctaataatg cggtcgcaag
    36781 atcccctacc gttgagcttg gtgctttttg aaccataata tcgcctgtct ctgcatgctt
    36841 aaatgcatga acaactagtt ctaccgcatc ttctaagctc attaaaaatc ttgtcatttc
    36901 aggatctgta atcgttaaag gttctccagc tttgattttt tcgataaaca aaggaattac
    36961 tgatcctctt gaagccatca cattaccgta tcttgtaccg caaataagcg tttgttcact
    37021 acgaatattt cttgatttgg ctacgaatac tttttccatc attgctttcg aaatacccat
    37081 agcattaata ggatacgctg ccttatctgt agataaacat atgacttttt taacattttg
    37141 atgaatagca ctttgtaaga cattttctgt accaataata tttgtcttca ctgcctcaac
    37201 tggaaagaat tcacatgacg gcacttgttt taaagctgct gcatggaata cgtaatcaac
    37261 atctcgcatt gctgtttcta cactttgact atcacgcaca tcaccaatgt agaactttaa
    37321 ttttgaatta ttatattttt ttcgaatgtc atcttgtttt ttctcatcgc gtgaaaaaat
    37381 acgaatttct ttaatattag aatctaaaaa ccgtttcata acagcattac cgaatgatcc
    37441 tgtgccccca gtaattaata aaattttgtc atcgaacata attatctccc tttttgccat
    37501 tggcatagtt aataattttt tctttactaa agtcattgac gatgtcttga ataatcgctt
    37561 caacttcatt acatttcata tgttgtactt tgccacgata aattttttca aatacttgtt
    37621 caggatgaac ctcatcttta ttcataagct cttcaaacat tttttcgccg ggtctaatcc
    37681 ctgtataagt aatgcgtatg tcgtcttctt ttttaccact tagcttaatt aaattacgtg
    37741 ctaaatctac aattttcact ggttctccca tatctagtac aaatacttcg ccgccttctg
    37801 ctaatgcccc tgcctgcaaa actagtctag aagcttcagg aattgtcata aagtaacgtg
    37861 tcatttcagg atgtgtcaca gtaactggcc caccttcttc aatttgactt ttgaaaagtg
    37921 gaatcacaga tcctctcgat ccaagtacat taccaaatct cactgcaaca aaatttgttc
    37981 gatgcgtttc atcatttaaa ctttgaataa tcatttctgc aattcgcttt gaagctccca
    38041 tgacattagg tggattaacg gctttatccg tagaaatcat aacgaatttc tttacctctg
    38101 cattttttgc agcttcagca gtatttttcg tacctaaaat attattacgt actgcttctt
    38161 cagggttgtc ttccattaac ggcacgtgct tgtgtgctgc tgcatgataa actgcgtatg
    38221 gtttatacat ttccataatt tcaaacatac gcgctctatt ttgcacatcc gctataatag
    38281 gaacaatatc aatatttttt ccgaagcgat ttcgcaattc acgattgatt aaataaatac
    38341 tgttttcacc atggccaagt agaataatac gttctggata gaaattacaa acttgtctac
    38401 aaatttctga tcctattgaa ccacctgcac ccgtaactaa aatagtttta ttcgtcaatt
    38461 catttgatat catatccata tctaattcaa caggatctct gcctaataaa tcttctactt
    38521 caactttttt cagctggttc acttctaact caccagacat gacgtcttct atgtttggca
    38581 ttttcaataa ctcaacgcca tccatatggc aaatattatt aatttctttc aaacgctctt
    38641 gaccaatggt tggaattgca atgatgattt ttttaatctt atatttcctc actagttctg
    38701 gaatatccgc aattttacct tggactttta caccctcagt aattgtgata ttgcgtttat
    38761 gttcgtcatc atcgactgct aataccggtt caagtttcat ttcatcactt ttcaacattt
    38821 gtctaatcag cattgaacct gcttggccag caccaacaac taaagttggc ttcttattaa
    38881 atgacttacc tccaaggtat ttccgataaa tacgccaaaa taaccttgag ccacctatta
    38941 aaatcaagtg catcatccaa gtgattaaat acaatctaaa aaacggtcta ttgcctgtaa
    39001 caattgtcac gaccaccatc gtaataacga tagatgtcgt cacagcttta acaattaata
    39061 tcaattcact cacactggca tattcccacg ctcgatgata catattaaaa ataaatgctg
    39121 aaatatgatg cgatatgaat agtgatatag ctgccaatat taataatttg acagaatatg
    39181 ttttgaaata cggttctaaa atgtaataac ttacgaatac tgaaaatgtc actatcagtg
    39241 aatcgattaa tgctagtatt aaaagccgca atttcacaga taaatgtgcc ataaaacccc
    39301 tcatttgctg tttataaccc aaaccatctt ttctgtttat aatcttgttg tggcattcgt
    39361 ttaggaattt ttttatcatc aacaactaac ttcgcattac taataaatcc gttcatatct
    39421 tcataataat cacgtaattt cttatcatta aataagtctt tcaataagaa cggtctgatt
    39481 tctgtgttat gcgcatctga accgatgaaa tgtgtcagat tgttttcaat catttgaatt
    39541 gctaattttc taattttttt accggaaata cccgctaatg acgccgttgt cacttgactt
    39601 aaagcacctt tgttaattaa atcgtatagt atgtcaaggt tttgacttat agctttattc
    39661 cgctctggat gtgcaataat cggtacaaag cctttactct gtaattcgaa aaataattga
    39721 tcagtatagt gtggaacttc atttgatggg aattctatta gtaaataacg tgaatcatta
    39781 ataccggtaa taacttttcg atcaatatca ttaaggattt gatcggtaat tcttatttcc
    39841 tgaccataat aaaactttag attcagtgct tgtacttcct ctaagctttc aatatggttt
    39901 aaacatgatt tcactttttc tataggtgtg gtatatcgag gatgtaagtg atgtgatgtt
    39961 acaatgattt ctgtaacacc ttgtgttgtc gcttgtttta aaagagccag catctctgtt
    40021 tcatttgtcg gaccgtcatc gatattaggc aatatatggt tatgaatatc aatcatactt
    40081 attcatctcc ataatagtga taataactag aagatttatc tacttttgcc ttatttaaaa
    40141 tgacgcctag aatgttactg cctgcttttt ccataagtgt tttagctttt ttaacttcat
    40201 ttttatcatt tttttcacta tcaattacta acagactatc tttaatagca cgcgcatata
    40261 gttgtgcatc agtcacggta ttaactggcg gtgtatcgac aataataatg tcgtaacgtt
    40321 tattaaacat atcaactaat tctttgaacc tttcagaccc aattaactca gatggatttg
    40381 gaggtacagg accagctgtt agtaaatcta aattatcaat ttctgtcgac gtaattgctt
    40441 ctgacatagt cgttctacca atgattaagc ttgatagtcc attattattt tgctcattaa
    40501 aaatatagtt ttgtgttggc ttacgcatat cgccatcaat aactaacgtc ttatagcctg
    40561 cttgtgcata agtaatcgct acattcgata caactgtact tttacctgca ccaggctttt
    40621 cagaagtaac caataagcgc tttacttcac catttgcttt tgaaaacatg atgtttgaac
    40681 gtataccacg aaacttttca ctaattgttg attttggttt ttcatacaca aatagtgttg
    40741 ttgtcgtatt ttccttcttt gacataagta gcaaccatcc ttaattatat ttttgaattg
    40801 aacccaatac aggcaatcct aattctttct ctacatcttc ttcatcttta attcgcttat
    40861 cgaaaatgac tttgaagaag atatatataa gcgcgacaac taatcctaaa aagaatgcac
    40921 cgattagatt cactacagtt tttggtgcga ctttaactgc tgtaccgtct gctttagata
    40981 aaattgatac gttatccaca ctcataatct tcggtatttg tttacttgta actttagcga
    41041 agctattcgc aattttttcc gaatcttgtt tatgaccact tttaacttgg atgttgataa
    41101 gttgcgtatt ttcttggttt gtaattgtca acatactcga taatttagat ggtgaatact
    41161 tatcatttaa gtcctttgac acctcatcta aaattctagg acttttaaca atttctttat
    41221 acgtatttac aagttgaata ttactttgaa cctcttgcgc cataaactga ggattgtcac
    41281 ccttagtttg attcactaaa atttgagtat tagcttgata tttaggtgat aagacgaaga
    41341 atgtaacaat cgcgcttata attaaaaata atagcggtaa aataattaaa atcttcaagt
    41401 ttttttgtaa tacttcttta atttttgtta attctaatgt actttccatt atttacctcc
    41461 ct
//
LOCUS       DALMNS010000006        40381 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.006, whole genome shotgun sequence.
ACCESSION   DALMNS010000006 DALMNS010000000
VERSION     DALMNS010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 40381)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40381)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40381
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.006"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..665)
                     /locus_tag="O6Y56_000287"
     CDS             complement(<1..665)
                     /locus_tag="O6Y56_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HDB5573583.1"
                     /translation="MNKTKGFTKYKKMIYMPGLDGLRAIAVLGIIIYHLNKQWLTGGF
                     LGVDTFFVISGYLITSLLLKEYDDTGIIKLKSFWIRRLKRLLPAVIVLLMVVGTATLL
                     LKSENIIRVKHDIIAAIFYVSNWWYIAKDVNYFEQFSFMPLKHLWSLAIEEQYYIFFP
                     VILVTLLLTIKKRYKIGFIFWGVSIISLGLMMFIYSINGDHSRVYFGTDTRLQTLLLG
                     VILA"
     gene            complement(1319..1627)
                     /locus_tag="O6Y56_000288"
     CDS             complement(1319..1627)
                     /locus_tag="O6Y56_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HDB5573584.1"
                     /translation="MEEALKDSILGALEMVIDPELGIDIVNLGLVYKVNVDDEGVCTV
                     DMTLTSMGCPMGPQIIDQVKTVLAEIPEIQDTEVNIVWSPPWTKDMMSRYAKIALGVS
                     "
     gene            1741..2565
                     /locus_tag="O6Y56_000289"
     CDS             1741..2565
                     /locus_tag="O6Y56_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDB5573585.1"
                     /translation="MQPHLICLDLDGTLLNDNKEISSYTKQVLNELQQRGHQIMIATG
                     RPYRASQMYYHELNLTTPIVNFNGAYVHHPKDKNFKTCHEILDLGIAQNIIQGLQQYQ
                     VSNIIAEVKDYVFINNHDPRLFEGFSMGNPRIQTGNLLVHLKESPTSILIEAEESKIP
                     EIKNMLTHFYADHIEHRRWGAPFPVIEIVKLGINKARGIEQVRQFLNIDRNNIIAFGD
                     EDNDIEMIEYARHGVAMENGLQELKDVANNITFNNNEDGIGRYLNDFFNLNIRYYC"
     gene            2617..3933
                     /locus_tag="O6Y56_000290"
     CDS             2617..3933
                     /locus_tag="O6Y56_000290"
                     /EC_number="1.8.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-disulfide reductase"
                     /protein_id="HDB5573586.1"
                     /translation="MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCA
                     LPYVIGEVVEDRKYALAYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQF
                     EESYDKLILSPGASAHSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVS
                     LEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEIVAINGN
                     EITFKSGRVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIG
                     DIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFA
                     SVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGA
                     DKRIDVLSMAMMNQLTVDELTEFEVAYAPPYSHPKDLINMIGYKAK"
     gene            complement(4105..4494)
                     /locus_tag="O6Y56_000291"
     CDS             complement(4105..4494)
                     /locus_tag="O6Y56_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YisL family protein"
                     /protein_id="HDB5573587.1"
                     /translation="MLHLHILSWVLAIILFIATYLNISKNQGGTPYFKPLHMVLRLFM
                     LLTLISGFWILIQSFMNGGANHMLLTLKMLCGVAVVGLMEVSIAKRKRHEQSHTMFWI
                     TIALIIITMVLGVILPLGPISKLFGIG"
     gene            complement(4822..5724)
                     /locus_tag="O6Y56_000292"
     CDS             complement(4822..5724)
                     /locus_tag="O6Y56_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HDB5573588.1"
                     /translation="MKFLSFKYNDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTL
                     LAGLQQNHTLDFQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNY
                     KDHANELNHEVERLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKI
                     PKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENV
                     NIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQPPK
                     FLQPGDEVKVTIDNIGTLTTYIAK"
     gene            complement(5890..9543)
                     /gene="addA"
                     /locus_tag="O6Y56_000293"
     CDS             complement(5890..9543)
                     /gene="addA"
                     /locus_tag="O6Y56_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddA"
                     /protein_id="HDB5573589.1"
                     /translation="MTIPEKPQGVIWTDAQWQSIYATGQDVLVAAAAGSGKTAVLVER
                     IIQKILRDGIDVDRLLVVTFTNLSAREMKHRVDQRIQEASIADPANAHLKNQRIKIHQ
                     AQISTLHSFCLKLIQQHYDVLNIDPNFRTSSEAENILLLEQTIDEVIEQHYDILDPAF
                     IELTEQLSSDRSDDQFRMIIKQLYFFSVANPNPTDWLDQLVTPYEEEAQQAELIQLLT
                     DLSKVFITAAYDALNKAYDLFSMMDGVDKHLAVIEDERRLMRRVLEGGFIDIPYLTGH
                     EFGARLPNITAKIKEANEMMVDALEDAKLQYKKYKSLIDKVKSDYFSREADDLKADMQ
                     QLAPRVKYLARIVKDVMSEFNRKKRSKNILDFSDYEHFALQILTNEDGSPSEIAESYR
                     QHFQEILVDEYQDTNRVQEKILSCIKTGDEHNGNLFMVGDVKQSIYKFRQADPSLFIE
                     KYQRFTIDGDGTGRRIDLSQNFRSRKEVLSTTNYIFKHMMDEQVGEVKYDEAAQLYYG
                     APYDESDHPVNLKVLVEADQEHSDLTGSEQEAHFIVEQVKDILEHQKVYDMKTGSYRS
                     ATYKDIVILERSFGQARNLQQAFKNEDIPFHVNSREGYFEQTEVRLVLSFLRAIDNPL
                     QDIYLVGLMRSVIYQFKEDELAQIRILSPNDDYFYQSIVNYINDEAADAILVDKLKMF
                     LSDIHSYQQYSKDHPVYQLIDKFYNDHYVIQYFSGLIGGRGRRANLYGLFNKAIEFEN
                     SSFRGLYQFIRFIDELIERGKDFGEENVVGPNDNVVRMMTIHSSKGLEFPFVIYSGLS
                     KDFNKRDLKQPVILNQQFGLGMDYFDVDKEMAFPSLASVAYRAVAEKELVSEEMRLVY
                     VALTRAKEQLYLIGRVKNDKSLLELEQLSISGEHIAVNERLTSPNPFHLIYSILSKHQ
                     SASIPDDLKFEKDIAQVEDSSRPNVNISIVYFEDVSTETILDNDEYRSVNQLETMQNG
                     NEDVKAQIKHQLDYQYPYVNDTKKPSKQSVSELKRQYETEESGTSYERVRQYRIGFST
                     YERPKFLSEQGKRKANEIGTLMHTVMQHLPFKKERISKVELHQYIDGLIDKHIIEADA
                     KKDIRMDEIMTFINSELYSIIAEAEQVYRELPFVVNQALVDQLPQGDEDVSIIQGMID
                     LIFVKDGVHYFVDYKTDAFNRRRGMTDEEIGTQLKNKYKIQMKYYQNTLQTILNKEVK
                     GYLYFFKFGTLQL"
     gene            complement(9544..13020)
                     /gene="addB"
                     /locus_tag="O6Y56_000294"
     CDS             complement(9544..13020)
                     /gene="addB"
                     /locus_tag="O6Y56_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddB"
                     /protein_id="HDB5573590.1"
                     /translation="MTLHAYLGRAGTGKSMKMLTEIKQKMKADPLGDPIILIAPTQST
                     FQLEQAFVNDSELNGSLRTEVLHFERLSHRIFQEVGSYSEQKLSKAATEMMIYNIVQE
                     QQKYLKLYQSQAKYYGFSEKLTEQIQDFKKYAVTPEHLESFIADKNMQTRTKNKLEDI
                     ALIYREFEQRIQNEFITGEDALQYFIDCMPKSEWLKRADIYIDGFHNFSTIEYLIIKG
                     LIKYAKSVTIILTTDGNHDQFSLFRKPSEVLRHIEEIANELNISIERQYFKQLYRFNN
                     QDLKHLEQEFDALQINRVACQGHINILESATMREEINEIARRIIVDIRDKQLRYKDIA
                     ILYRDESYAYLFDSILPLYNIPYNIDTKRSMTHHPVMEMIRSLIEVIQSNWQVNPMLR
                     LLKTDVLTASYLKSAYLVDLLENFVLERGIYGKRWLDDELFNVEHFSKMGRKAHKLTE
                     DERNTFEQVVKLKKDVIDKILHFEKQMSQAATVKDFATAFYESMEYFELPNQLMTERD
                     ELDLNGNHEKAEEIDQIWNGLIQILDDLVLVFGDEPMSMERFLEVFDIGLEQLEFVMI
                     PQTLDQVSIGTMDLAKVDNKQHVYLVGMNDGTMPQPVTASSLITDEEKKYFEQQANVE
                     LSPTSDILQMDEAFVCYVAMTRAKGNVTFSYSLMGSSGDDKEISPFLNQIQSLFNQLE
                     ITNIPQYHEVNPLSLMQHAKQTKITLFEALRAWLDDEIVADSWLDAYQVIRDSDHLNQ
                     GLDYLMSALTFDNETVKLGETLSKDLYGKEINASVSRFEGYQQCPFKHYASHGLKLNE
                     RTKYELQNFDLGDIFHSVLKYISERINGDFKQLDLKKIRQLTNEALEEILPKVQFNLL
                     NSSAYYRYLSRRIGAIVETTLSALKYQGTYSKFMPKHFETSFRRKPRTNDELIAQTLT
                     TTQGIPINIRGQIDRIDTYTKNDTSFVNIIDYKSSEGSATLDLTKVYYGMQMQMMTYM
                     DIVLQNKQRLGLTDIVKPGGLLYFHVHEPRIKFKSWADIDEDKLEQDLIKKFKLSGLV
                     NADQTVIDALDIRLEPKFTSDIVPVGLNKDGSLSKRGSQVADEATIYKFIQHNKENFI
                     ETASNIMDGHTEVAPLKYKQKLPCAFCSYQSVCHVDGMIDSKRYRTVDETINPIEAIQ
                     NINIDDEFGGEQ"
     gene            complement(13180..13755)
                     /gene="lepB"
                     /locus_tag="O6Y56_000295"
     CDS             complement(13180..13755)
                     /gene="lepB"
                     /locus_tag="O6Y56_000295"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDB5573591.1"
                     /translation="MKKELLEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDG
                     ERVAVNIIGYKTGGLEKGNVVVFHANKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQD
                     EPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGL
                     IDEDQIVGKVSFRFWPFSEFKYNFNPENTKN"
     gene            complement(13771..14295)
                     /gene="lepB"
                     /locus_tag="O6Y56_000296"
     CDS             complement(13771..14295)
                     /gene="lepB"
                     /locus_tag="O6Y56_000296"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDB5573592.1"
                     /translation="MKKVVKYLISLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGD
                     RVIVNKIKVTFNQLNNGDIITYRRGNEIYTSRIIAKPGQSMAFRQGQLYRDDRPVDAS
                     YAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDHDNNQHDSRQFGLVDKKDIIGNISL
                     RYYPFSKWTIQFKS"
     gene            complement(14300..14875)
                     /locus_tag="O6Y56_000297"
     CDS             complement(14300..14875)
                     /locus_tag="O6Y56_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HDB5573593.1"
                     /translation="MSFHQVEEWFEIFRQFGYLPGFILLYIRAIIPVFPLALYILINI
                     QAYGPILGILISWLGLISGTFTVYLICKRLVNTERMQRIKQRTAVQRLISFIDRQGLI
                     PLFILLCFPFTPNTLINFVASLSHIRPKYYFIVLASSKLVSTIILGYLGKEITTILTH
                     PLRGILMLVVLIVFWIVGKKLEQHFMGSKKE"
     gene            complement(15799..17130)
                     /locus_tag="O6Y56_000298"
     CDS             complement(15799..17130)
                     /locus_tag="O6Y56_000298"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDB5573594.1"
                     /translation="MTHIQLDFSKTLEFFGEHELKQQQEIVKSIHKTIHEGTGAGSDF
                     LGWVDLPVDYDKEEISRIVEASKRIKENSDVLVVIGIGGSYLGARAAIEMLTSSFRNS
                     NEYPEIVFVGNHLSSTYTKELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVEER
                     YGKEEAQKRIFATTDKEKGALKQLATNEGYETFIVPDDVGGRYSVLTAVGLLPIATAG
                     INIEAMMNGAAKAREELSSDKLEENIAYQYATIRNILYAKGYTTEMLINYEPSMQYFN
                     EWWKQLFGESEGKDFKGIYPSSANYTTDLHSLGQYVQEGRRFLFETVVKVNHPKYDIT
                     IEKDSDDLDGLNYLAGKTIDEVNTKAFEGTLLAHTDGGVPNMVVNIPQLDEETFGYVI
                     YFFELACAMSGYQLGVNPFNQPGVEAYKQNMFALLGKPGFEDLKKELEDRL"
     gene            17481..18686
                     /locus_tag="O6Y56_000299"
     CDS             17481..18686
                     /locus_tag="O6Y56_000299"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDB5573595.1"
                     /translation="MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVGEGKDLDI
                     VYKKALDMGAVECHIIDATKEFSDEYVSYAIKGNLMYENAYPLVSALSRPLIAKKLVE
                     IAEKTNSVGIAHGCTGKGNDQVRFEVAIKALNPSLKAFAPVREWAWSREEEIDYAIKH
                     NIPVSINHDSPYSIDQNLWGRANECGILEDPYAAPPEDAFDLTNALEETPDTADEIIL
                     TFVKGIPVQIDGKTYELDDLILTLNALAGKHGIGRIDHVENRLVGIKSREIYEAPAAE
                     VILKAHKALETITLTKDVAHFKPIIEKQFAEQLYNGLWFSPLTDSLKLFIDSTQQYVS
                     GDVRIKLFKGNAIVNGRKSPYTLYDEKLATYTKEDAFNQDAAVGFIDIYGLPTQVNAM
                     LHGGYSNEQ"
     gene            18676..20055
                     /gene="argH"
                     /locus_tag="O6Y56_000300"
     CDS             18676..20055
                     /gene="argH"
                     /locus_tag="O6Y56_000300"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDB5573596.1"
                     /translation="MSNKAWGGRFEVQPEEWVDDFNASITFDQTLIDQDIEGSIAHAT
                     MLANQGIISQQDSEQIIQGLKSIQHDYHQDQIQFSASLEDIHLNIEHELIKRIGDAGG
                     KLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSLQSVIVDIASNNVDTIMPGYTHLQR
                     AQPISFAHHIMTYFWMLQRDQQRFEDSLKRIDINPLGAAALSGTTYPIDRHETTALLN
                     FGSLYENSLDAVSDRDYIIETLHNISLTMVHLSRFAEEIIFWSTDEAKFITLSDAFST
                     GSSIMPQKKNPDMAELIRGKVGRTTGHLMSMLMTLKGLPLAYNKDMQEDKEGLFDAVH
                     TIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKI
                     VLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQL
                     DVAKQLLSQ"
     gene            20297..21226
                     /locus_tag="O6Y56_000301"
     CDS             20297..21226
                     /locus_tag="O6Y56_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HDB5573597.1"
                     /translation="MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQ
                     WHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMH
                     DETVNRTTNGHGKVEDYTLDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERY
                     GPYANYYIETKSPDVYPGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHR
                     QNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHP
                     YTVNEKADMLRLNKYGVDGVFTNFADKYKEVIK"
     gene            complement(21678..22922)
                     /locus_tag="O6Y56_000302"
     CDS             complement(21678..22922)
                     /locus_tag="O6Y56_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HDB5573598.1"
                     /translation="MTENNNLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIP
                     VRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPY
                     GGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDE
                     YSALDKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQG
                     FGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEETI
                     SNKELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILL
                     VPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDM
                     RLAAYIIGIKRTAEAARYRGWA"
     gene            complement(23031..24221)
                     /locus_tag="O6Y56_000303"
     CDS             complement(23031..24221)
                     /locus_tag="O6Y56_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HDB5573599.1"
                     /translation="MTKSEKIIELTNHYGAHNYLPLPIVISEAEGVWVKDPEGNKYMD
                     MLSAYSAVNQGHRHPKIIQALKDQADKVTLVSRAFHSDNLGEWYEKICKLAGKDKALP
                     MNTGAEAVETALKAARRWAYDVKGIEPNKAEIIAFNGNFHGRTMAPVSLSSEAEYQRG
                     YGPLLDGFRKVDFGDVDALKAAINENTAAVLVEPIQGEAGINIPPEGYLKAIRELCDE
                     HNVLFIADEIQAGLGRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDV
                     FTPGSHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQIDHPSIKEV
                     RGRGLFIGVELNESARPYCEALKEEGLLCKETHDTVIRFAPPLIITKEELDLALEKIR
                     HVFQ"
     gene            complement(24530..25657)
                     /locus_tag="O6Y56_000304"
     CDS             complement(24530..25657)
                     /locus_tag="O6Y56_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent flavin oxidoreductase"
                     /protein_id="HDB5573600.1"
                     /translation="MKSKYEPLFDKVELPNGVELRNRFVLAPLTHISSNDDGTISDVE
                     LPYIEKRSQDVGITINAASNVSDVGKAFPGQPSIAHDSDIEGLKQLATAMKKNGAKAL
                     VQIHHGGAQALPELTPDGDVVAPSPISLKSFGQKQEHSAREMTNEEIEQAIKDFGEAT
                     RRAIEAGFDGVEIHGANHYLIHQFVSPYYNRRNDVWANQYKFPVAVIEEVLKAKEAYG
                     NRDFIVGYRLSPEEAESPGITMEITEELVNKISHMPIDYIHVSMMDTHATTREGKYAG
                     QERLPLIHKWINGRMPLIGIGSIFTADEALDAVENVGVDLVAIGRELLLDYQFVEKIK
                     DGREDEIINYFDPEREDNHHLTPNLWHQFNEGFYPLPRKDK"
     gene            complement(26019..26396)
                     /locus_tag="O6Y56_000305"
     CDS             complement(26019..26396)
                     /locus_tag="O6Y56_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001067296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HDB5573601.1"
                     /translation="MNNYKIGQHIKVRVTGIQPYGAFVETPNHTEGLIHISEIMDDYV
                     HNLKKFLSEGQIVKAKILSIDDEGKLNLSLKDNDYFKNYERKKEKQSVLDEIRETEKY
                     GFQTLKERLPIWIKQSKRAIRND"
     gene            complement(26811..27404)
                     /locus_tag="O6Y56_000306"
     CDS             complement(26811..27404)
                     /locus_tag="O6Y56_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDB5573602.1"
                     /translation="MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFV
                     THAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNLYGALS
                     MANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVF
                     GQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE"
     gene            27468..27851
                     /locus_tag="O6Y56_000307"
     CDS             27468..27851
                     /locus_tag="O6Y56_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase-associated lipoprotein B"
                     /protein_id="HDB5573603.1"
                     /translation="MKLYRFSHKTGSYGVTIVEENGDDVLVKVEQVIKHPKQGDLHNP
                     TETEGVFFHERKALSHFEKRYTKRSQLRDFNVDVLRYEDSLQQAITDLETKLKAQQTK
                     HAEMSLASLARLKEDYSLQYKENFK"
     gene            27982..30387
                     /gene="mnhA1"
                     /locus_tag="O6Y56_000308"
     CDS             27982..30387
                     /gene="mnhA1"
                     /locus_tag="O6Y56_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit A"
                     /protein_id="HDB5573604.1"
                     /translation="MSLLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIY
                     MLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLGLLFSLLISGIGSLVVLYSIGYL
                     SKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIY
                     GAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIG
                     AFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTV
                     TLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISYHYQGDDSKIYA
                     AAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITVITAL
                     SMAGVPPFNGFLSKESFLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFI
                     MHIFFGQYKPEQLPKKAHEVSILMLLSPAILATLVIVFGLFPGILTNSIIEPATSSIN
                     HTVIDDVEFHMFHGLTPAFLSTLVIYILGILLIVTFSYWVKLLQRQPGKLTFNYWYNR
                     SANVIPNYSEKMTNSYVTDYSRNNLVIIFGALILLTFITVFSVPFNINFKDVSPIRIF
                     EVCIVILLLSAAFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESIS
                     TALFLLCFYHLPNLNRYNEKRSFQLTNALIAGGVGLSVIIIGLIAYGNRHFESISKFY
                     QEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRKKRQTQGNEVK
                     NHE"
     gene            30380..30808
                     /gene="mnhB1"
                     /locus_tag="O6Y56_000309"
     CDS             30380..30808
                     /gene="mnhB1"
                     /locus_tag="O6Y56_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit B"
                     /protein_id="HDB5573605.1"
                     /translation="MNRQQNDLILQFAAVIIFFMVMVFGFSLFLAGHYTPGGGFVGGL
                     LFASSLVIITIAFDIETMRKIFPLDFKILIGIGLVFCIATPIASWFLGKNFFTHVTFD
                     IPLFILEPVHMTTAVFFDFGVLCAVVGTVMTIIISIGENE"
     gene            30808..31149
                     /gene="mnhC1"
                     /locus_tag="O6Y56_000310"
     CDS             30808..31149
                     /gene="mnhC1"
                     /locus_tag="O6Y56_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000402803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit C"
                     /protein_id="HDB5573606.1"
                     /translation="MEIIMIFVSGILTAISVYLVLSKSLIRIVMGTTLLTHAANLFLI
                     TMGGLKHGTVPIYEANVKSYVDPIPQALILTAIVIAFATTAFFLVLAFRTYKELGTDN
                     VESMKGVPEDD"
     gene            31142..32638
                     /gene="mnhD1"
                     /locus_tag="O6Y56_000311"
     CDS             31142..32638
                     /gene="mnhD1"
                     /locus_tag="O6Y56_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit D"
                     /protein_id="HDB5573607.1"
                     /translation="MIESNMLVLTLVIPVITAILLVFIGKRPIIKRYVALGGTLLTLV
                     AAIINLANVVKHGPLRVELGSWKAPYSIVFVLDIFSALLIITSIIITAIVILYSYQTI
                     GIERERYYYYFSVLFMLIGIIGAFTTGDIFNLFVFFEVFLMSSYFLLVIGSTKIQLQE
                     TIKYVLVNVVSSSFFVMGVAILYSVVGTLNLADISNKLANLSAHDSGLVNIVFILFIF
                     VFATKAGVFPMFVWLPSAYYAPPIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSH
                     YVILFLALLTIIFGCVGAVAYANIKKIILYNVMIAVGVILVGVAMMTESGMIGAIYYT
                     LHDMLVKLALFLLIGIIIKITGTADLRQFGGLIKRYPVLGWSFFIAALSLAGIPPLSG
                     FYGKFFIVQSTFERGFYLSGVIVLLSSLVVLYSVIRIFLQGFFGQPKGYDLNNKVDVK
                     YLTTIAIVAVVITVLYGLSADYLYPMVKAGAETFYNPSTYVKAVLGGK"
     gene            32640..33119
                     /gene="mnhE1"
                     /locus_tag="O6Y56_000312"
     CDS             32640..33119
                     /gene="mnhE1"
                     /locus_tag="O6Y56_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit E"
                     /protein_id="HDB5573608.1"
                     /translation="MAVQLVLNFIIAVFWLFVTNSYTTNNFVLGFIFGLVLVYLLHRV
                     LPGRFYVITLYRIIKLIIIFLIELIKANFDVLKIIIKPSIKNEPGFFVYHTDLKKDWQ
                     IVLLSNLITLTPGTVVLGVSDDRTKIYIHAIDFSTKEQEVESIKTSLEKIVREVGEI"
     gene            33119..33412
                     /gene="mnhF1"
                     /locus_tag="O6Y56_000313"
     CDS             33119..33412
                     /gene="mnhF1"
                     /locus_tag="O6Y56_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit F"
                     /protein_id="HDB5573609.1"
                     /translation="MNHNVIIVIALIIVVISMLAMLIRVVLGPSLADRVVALDAIGLQ
                     LMAVIALFSILLNIKYMIVVIMMIGILAFLGTAVFSKFMDKGKVIEHDQNHTD"
     gene            33390..33746
                     /gene="mnhG1"
                     /locus_tag="O6Y56_000314"
     CDS             33390..33746
                     /gene="mnhG1"
                     /locus_tag="O6Y56_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit G"
                     /protein_id="HDB5573610.1"
                     /translation="MIKIILISLALIFVIIGALISALAAIGLLRLEDVYSRAHAAGKA
                     STLGAMSLLFGTFLYFIATQGFVNMQLIVAIIFVLITGPLSSHMIMKAAYNIKTPYTK
                     KTKVDEISEDLKDTKL"
     gene            34009..35163
                     /locus_tag="O6Y56_000315"
     CDS             34009..35163
                     /locus_tag="O6Y56_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding protein"
                     /protein_id="HDB5573611.1"
                     /translation="MHWTIIGGGIQGTAIAQKLLSSGLTTDRLTIIDPHETFCQRFNS
                     YTNRIEMPYLRSPIVHHVHPQPFHLKQFAKQHQYTNAFYGPYQRPELTMFMDHIAHAS
                     KQYQLEDCLVQGLVQTLDKQEDKWHIKLEDGQIITTDCVVIAIGSTNIPFMPDILKDK
                     QNVNHIFEKEHDQVVYDKTDHIVGSGITAAHLALKLLNHDDDKKIHLWLNKDIEIHDF
                     DADPGWLGPKNMSSFLSTKSMPERNAIVQRERHKGSMPHELYLRLKKHIKNGRINVHK
                     TPITQISDGLINTENDSVPYQQIMVATGFEQDFMSQPLIKQLIQNYDAPINECNYPVI
                     SEKLEWIPNLFVAGCFADLELGPFGRNVMGGRKAAERIEQAFLKLQQYSA"
     gene            complement(35219..35593)
                     /locus_tag="O6Y56_000316"
     CDS             complement(35219..35593)
                     /locus_tag="O6Y56_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HDB5573612.1"
                     /translation="MTHLLETFEMSIDHQEDGLVVISMPVTDKVKQPFGYLHGGASIA
                     LGETACSLGSANLIDTTKFIPLGLEMNANHIHSAKDGRVTATAEIIHQGKSTHVWDIK
                     IKNDKEQLITVMRGTVAIKPLK"
     gene            complement(35612..36928)
                     /locus_tag="O6Y56_000317"
     CDS             complement(35612..36928)
                     /locus_tag="O6Y56_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HDB5573613.1"
                     /translation="MINAVVIAVILMIVLCLCRLNVVISLFISALVGGLISGMSIEKV
                     INVFGKNIVDGAEVALSYALLGGFAALISYSGITDYLVGKIINAIHAENSRWSRVKVK
                     VTIIIALLAMSIMSQNLIPVHIAFIPIVIPPLLSLFNDLKIDRRLIGLIIGFGLCFPY
                     VLLPYGFGQIFQQIIQSGFAKANHPIEFNMIWKAMLIPSMGYIVGLLIGLYVYRKPRE
                     YETRKISDSDNVTELKPYILIVTIVAILATFLVQTFTDSMIFGALAGVLVFFISRAYN
                     WYELDAKFVEGIKIMAYIGVVILTANGFAGVMNATGDIDELVKTLTSITGDNKLFSII
                     MMYVIGLIVTLGIGSSFATIPIIASLFIPFGASIGLDTMALIALIGTASALGDSGSPA
                     SDSTLGPTAGLNVDGQHDHIRDTCVPNFLFYNIPLMIFGTIAAMVL"
     gene            complement(37339..38814)
                     /locus_tag="O6Y56_000318"
     CDS             complement(37339..38814)
                     /locus_tag="O6Y56_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M17 family metallopeptidase"
                     /protein_id="HDB5573614.1"
                     /translation="MNFKLNNTLSNEINTLIIGIPEHLNQLERISFNHIDITESLERL
                     KHQHIIGSKVGKIYTTAFDVQDQTYRLITVGLGNLKTRSYQDMLKIWGHLFQYIKSEH
                     IEDTYLLMDSFISKYDQLSDVLMACGIQSERATYEFDHYKSSKKAPFKTNLNLISESL
                     IELDFIHEGISIGQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVEVKDYDTL
                     VSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDEAPIALVGKGITYDSGGYSIKTKNGM
                     ATMKFDMCGAANVVGIIEAASRLQLPVNIVGVLACAENMINEASMKPDDVFTALSGET
                     VEVMNTDAEGRLVLADAVYYANQYQPSVIMDFATLTGAAIVALGDDKAAAFESNSKVI
                     LNDILQISSKVDEMVYELPITATERASIKHSDIADLVNHTNGQGKALFAASFVTHFSG
                     QTPHIHFDIAGPATTNKASYNGPKGPTGFMIPTIVQWLKQQ"
     gene            complement(38945..40153)
                     /locus_tag="O6Y56_000319"
     CDS             complement(38945..40153)
                     /locus_tag="O6Y56_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDB5573615.1"
                     /translation="MAQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYH
                     YEATWLHEASAGTLNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDF
                     DILVVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLS
                     ILVGGAGFTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHA
                     VSYLEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTSVWAAGVRGSKLMEESFE
                     GVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIK
                     RILNGESTEEFEYVDRGTVCSLGSHDGVGMVFGKPIAGKKAAFMKKVIDTRAVFKIGG
                     IGLAFKKGKF"
BASE COUNT        13111 a         7208 c         5997 g        14065 t
ORIGIN      
        1 gctaaaataa cacccagtaa caatgtctgt aatcttgtat ctgttccaaa atacactcgt
       61 gaatgatccc cattaatact gtagataaac atcattaacc ctaaagaaat tatagatact
      121 ccccaaaaaa taaatcctat tttgtatcgc tttttaattg ttaacaataa tgtaaccaaa
      181 ataactggga aaaatatgta atactgttct tcaattgcta aagaccataa atgctttaat
      241 ggcataaatg aaaattgctc aaaataatta acatcttttg ctatatacca ccagtttgat
      301 acataaaata tcgcagcaat aatatcatgt ttaaccctaa tgatattttc tgattttaat
      361 aataaggttg ctgtccctac aaccattaat aaaactatga ctgctggtaa taaacgtttt
      421 aaacgacgta tccaaaagct tttcaattta atgatacccg tgtcatcata ctctttgagt
      481 aataagcttg taattaaata accagagatc acaaaaaatg tatctacacc taaaaagcca
      541 cctgtcaacc attgcttatt taagtggtaa ataataattc ctagaacagc gattgccctc
      601 aaaccatcga gccctggcat atatatcatt ttcttatatt ttgtaaaacc ctttgttttg
      661 ttcatttttg cattcttccc ttttaaaact gttcttctta gatgcttaat taaatttagt
      721 tatgctgttt aaaagaatat tgaaatgcat atgtatatta ttgaattacg acatcatcaa
      781 aatcatattg actaaaatac tgttaaatta aaaaattacc aatgatgatt cttatttcga
      841 aatccaattt gtaatgcaac tcggcaactt aaaaactatg aagtattatg cattgtaata
      901 taactgtaat ataaattcaa tttattatag aaattttaaa gaaaatattc aactaggaaa
      961 tgaattgtgc actcttagaa gtgcgtgtca ctgtcttagt tcatattttt tgaaacaagt
     1021 taaatataaa ttttcaaaat aaaatcagaa cctagaacgt aaataaggct cccttcaaaa
     1081 ttttcatttt tcaatgtcta ctttgaaggg agcttattca caatgaatta tactctacaa
     1141 tgttatattg actgcggggc cccaacacag agaatttcga aaagagattc tacaagcaat
     1201 gcgagttggg gagtgggccc caacacagag aatttcgaaa agaaattcta caagcaatgc
     1261 aagttggacg cggagcccca attggatttc caatttctac aagcaataca agtttatgtt
     1321 agctcacacc aagtgcaatc ttagcgtaac gtgacatcat atcttttgtc caaggtggac
     1381 tccatacgat attcacttca gtatcctgaa tttcaggaat ctctgctaat actgttttaa
     1441 cttgatcaat aatttgaggt cccattggac atcccattga tgttaaagtc atatcaactg
     1501 tacatacgcc ttcatcatca acatttactt tgtatactaa acctaaatta acgatatcaa
     1561 ttcctaattc agggtcaatt accatttcta atgcacctaa gatactatct ttcaatgcct
     1621 cttccatcca tatcacctct ttaatgtcat attattcata atatatcaaa tatccgacaa
     1681 aacgccaata aaatgctatg atgtatctat atgaactaag caacttatga ggagagagat
     1741 atgcaaccac atttaatatg tctagactta gacggaacat tattaaacga taacaaagaa
     1801 atttcatcat atactaaaca agtattaaat gaattacaac aacgtggaca ccaaattatg
     1861 attgcgactg gcagacctta tcgtgcaagt caaatgtatt atcatgaatt aaatttaacg
     1921 acaccaattg ttaattttaa tggcgcttac gtacatcacc ctaaagataa aaacttcaaa
     1981 acttgccatg aaattttaga tttaggcatc gcacaaaata ttattcaagg attacaacaa
     2041 tatcaagtat cgaatattat tgcagaagtg aaagattatg ttttcattaa caatcatgat
     2101 ccaagattat ttgaaggttt ttcaatgggt aatccaagaa ttcaaactgg taatttactt
     2161 gtccacttga aagaatcccc tacctcaatt ttaattgaag ccgaagaaag taaaatacct
     2221 gaaataaaaa atatgcttac tcatttttat gccgatcata ttgagcatcg acgctggggc
     2281 gcaccattcc ctgtcattga aattgtaaaa cttggtatta ataaagcaag aggtattgaa
     2341 caagttagac aatttttaaa tattgaccga aataatatta ttgcattcgg tgatgaagat
     2401 aatgatatag aaatgattga gtacgcccgc catggtgttg ctatggaaaa tggtttgcaa
     2461 gaacttaaag atgtagcgaa caatattaca ttcaacaata atgaagatgg cattggtcga
     2521 tatttgaatg atttctttaa tttaaatatt agatattact gttaatttat aactaatcat
     2581 tttataatat tttaaaacaa taggaggtaa gttacgatgc ccaaaatagt cgtagtcgga
     2641 gcagtcgctg gcggtgctac atgtgccagc caaattcgac gtttagataa agaaagtgac
     2701 attattattt ttgaaaaaga tcgtgatatg agctttgcta attgtgcatt gccttatgtc
     2761 attggcgaag ttgttgaaga tagaaaatat gctttagcat atacacctga aaaattttat
     2821 gatagaaagc aaattacagt aaaaacttat catgaagtta ttgcaatcaa tgatgaaaga
     2881 caaactgtat ctgtattaaa tagaaagacc aacgaacaat ttgaagaatc atacgataaa
     2941 ctcattttaa gccctggtgc aagtgcacat agccttggct ttgaaagtga tattacattt
     3001 acacttagaa atttagaaga cactgatgct atcgatcaat tcatcaaagc aaatcaagtt
     3061 gataaagtat tggttgtagg tgcagggtat gtttcattag aagttcttga aaatctttat
     3121 gaacgtggtt tacaccctac tttaattcat cgatctgata agataaataa attaatggat
     3181 gccgacatga atcaacctat acttgatgaa ttagataagc gagagattcc ataccgttta
     3241 aatgaggaaa ttgttgctat caatggaaat gaaattacat ttaaatcagg aagagttgaa
     3301 cattacgata tgattattga aggtgtcggt actcacccca attcaaaatt tatcgaaagt
     3361 tcaaatatca aacttgatcg aaaaggtttc ataccggtaa acgataaatt tgaaacaaat
     3421 gttccaaaca tttatgcaat aggcgatatt gcaacatcac attatcgaca tgtcgatcta
     3481 ccggcaagtg ttcctttagc ttggggcgct catcgtgcag caagtattgt tgccgaacaa
     3541 attgctggaa atgacactat tgaattcaaa ggcttcttag gcaacaatat tgtgaagttc
     3601 tttgattata catttgctag tgtcggcgtt aaaccaaacg aactaaagca atttgactat
     3661 aaaatggtgg aagtcactca aggtgcacac gcgaattatt acccaggaaa ttccccttta
     3721 cacttaagag tatattatga cacttcaaac cgtcagattt taagagcagc tgcagtagga
     3781 aaagaaggcg cagataaacg tattgatgta ctatcgatgg caatgatgaa ccagctaact
     3841 gtagatgagt taactgagtt tgaagtggct tatgcaccac catatagtca ccctaaagat
     3901 ttaatcaata tgattggtta caaagctaaa taaatgaatc atgcgattca atctaatctt
     3961 aattgtctag gttagaatta tgttggactg gtattactat ccagtccatt tttttgttta
     4021 aacattttta gaatcaaaaa aagacataag gtcttggact aataattgtc aatgccttat
     4081 gtcatatact atatgtctta tcaattagcc aataccgaat aattttgata taggccctaa
     4141 cggtagaatg acacctaata ccattgtgat gataattaat gcaattgtta tccaaaacat
     4201 tgtgtgactt tgttcatgtc tctttctttt agcaatcgac acttccatca atccaactac
     4261 tgcaacacca cacagcattt tcaatgtaag caacatatga tttgccccgc cattcataaa
     4321 tgactgaatt aatatccaaa atcctgaaat taacgtcaac agcataaata atcgtagtac
     4381 catatgtaat ggtttgaaat atggcgtacc accttgattt tttgaaatat ttaagtatgt
     4441 agcgataaat aaaatgattg ctaataccca acttaaaata tgtaaatgta acatattaat
     4501 ccccccactt taataatttt agttattaaa ttaaaacttc gtgggataaa tacccacttt
     4561 cttataattt aatcattatt tattcataca caaatacata ttttaccaca cttctatatt
     4621 tgtgaggaag aacatgacat tttattactt attagaatat tgtgcatctg ctgtaaaata
     4681 atcaactact gcttaatatc aacatttcac tttcgtctca aaatggtaac attataaaca
     4741 atgatcttta acaccttttt agaaaagcaa gaaaaaaact aaccaatcta tataaagact
     4801 ggttagcttt ttaaatgata attatttagc gatataagtt gtcagcgttc caatattatc
     4861 aatagtcact ttaacttcat cacctggttg taagaattta ggtggttgca tacctgcacc
     4921 aacgcctgct ggtgtaccag ttgcaataat atctcccgga tgtagtgcaa catattttga
     4981 aatttcttct attaattcat caattttaag aatcatttcg ccagtgttac catcttgtct
     5041 aatttcattg ttaacttttg taacaatatt tacattttca ggtaatggta gttcgtcttt
     5101 agtaacgata taaggaccca ttgggcaacc gccagttaaa ctttttgata aaaatgcttg
     5161 atcttgttca ctttgtgctt tgcgatcagt gatatcgtta ataattgtat agccgtaaac
     5221 ataatctaaa gctaatgctt ttggaatctt ttcaccagac ttaccaataa caatacctaa
     5281 ttcaccttca taatctaatt gatcagtaat atctttatga tttggaattg ttgcattatc
     5341 tccagttaaa gatgacgctg cttttgtaaa tacatataat ctttctactt catgatttaa
     5401 ttcgttcgca tgatctttgt aatttctacc aaaagcaatc acattattcg gaggtgttac
     5461 tggtggtaaa aattcaatat cattaaatga aattttatag tcttcagctt tgccgctatc
     5521 ttctgctgct acaactgctt tacgtacttg ttcttgaaaa tctaaagtat gattttgttg
     5581 taaaccagct aacaatgttt taggatggaa atctccttct gcaaagtcag caaatacttg
     5641 tgttaaatcc catacagcat cttcgcgttt tactttaacg ccatatgaag ttttgtcatt
     5701 atacttgaat gataagaatt tcattcattc tcaactcctc atctttatct taattcacat
     5761 tataactttt ttcgttatca aataacaaat aaataagtaa gacaattttg aaaatgagtt
     5821 gtgttcattc tgctacaagg actttgcact taatcgaaat tattttttat tcttttgaaa
     5881 atcaaaatac tatagttgca atgtaccaaa tttgaagaag tataaataac ctttaacttc
     5941 tttattaaga atcgtttgaa gcgtattttg ataatatttc atctgtatct tatatttatt
     6001 ttttaattgt gtaccaattt cttcatctgt catcccacgg cgacgattaa atgcatcggt
     6061 tttatagtct acaaaataat gcacaccatc tttaacaaag attaagtcaa tcataccttg
     6121 aataattgag acgtcttcgt ctccttgtgg caattggtca actaatgctt ggttaactac
     6181 aaacggtaat tcacgataaa cttgctctgc ttcagcaata atcgaatata actcactatt
     6241 gataaatgtc attatttcat ccatacgaat atcttttttc gcatctgctt cgataatatg
     6301 tttatcgatt aatccatcga tatactgatg taactcaact ttagatatgc gttctttttt
     6361 gaatggtaaa tgttgcatca ctgtatgcat taacgtacca atttcattcg cttttcgttt
     6421 accttgttca cttagaaatt taggtcgttc atacgttgaa aaaccgatac gatattgcct
     6481 tactcgttcg taacttgtgc cactttcttc agtttcatat tgtcttttca attcagaaac
     6541 agattgtttt gagggctttt tagtatcatt tacatatgga tattgataat caagttggtg
     6601 tttaatttgt gctttaacat cttcattacc attttgcata gtttctaatt gattaaccga
     6661 acgatactca tcattatcta aaatggtttc tgtagacaca tcttcaaagt acacaattga
     6721 aatatttaca ttcggacgac tactatcttc aacttgtgct atatcttttt caaattttaa
     6781 atcatctgga attgacgcag attgatgttt agataaaata ctataaatta gatggaacgg
     6841 atttggtgaa gttaatcgtt cattgacagc aatgtgctca ccagaaatag acaattgctc
     6901 tagttctagt aatgatttat catttttcac tctaccaatt aaataaagtt gttctttcgc
     6961 tcttgttaat gctacataga ctaatcgcat ttcttctgat acaagttctt tttcggcaac
     7021 agctctatat gcaaccgaag ctaaagatgg aaatgccatt tctttatcca catcaaaata
     7081 atccattccg agaccaaatt gctgatttaa aataactggt tgtttcaaat cacgtttatt
     7141 aaaatctttt gacaatccag aataaataac aaaaggaaac tctaaacctt tactactatg
     7201 aattgtcatc attctaacga cattatcgtt tggaccaact acgttttcct caccaaaatc
     7261 tttgcctctt tcaatcaatt catcgataaa acgaataaat tgatataaac ctctaaaact
     7321 tgaattctca aactcgatag ctttattaaa taaaccataa agatttgcac gtcttccacg
     7381 tccaccaatg agtccactaa agtattgaat aacataatga tcattataaa atttatcaat
     7441 taactgatac accggatgat ctttactata ttgttggtaa ctatgaatat ctgataaaaa
     7501 catttttaat ttatcaacta aaatagcatc tgctgcttcg tcattaatgt aatttacaat
     7561 cgattgatag aagtaatcat catttggact caatattcta atttgagcta attcgtcttc
     7621 tttgaactga tatataacgg agcgcattaa cccaactaaa taaatatctt gtaatggatt
     7681 atctatcgct cttaaaaatg ataatactaa acggacttct gtttgttcaa agtaaccttc
     7741 acgactattc acatggaacg gaatatcttc atttttaaag gcttgttgta aattgcgagc
     7801 ttgcccaaag ctgcgttcta gaataacgat atccttgtat gtcgcacttc tatagcttcc
     7861 tgttttcata tcataaactt tttgatgttc taaaatatct ttaacttgtt ctactataaa
     7921 atgcgcttct tgttcactac cagttaaatc actatgttct tgatccgctt caacaagcac
     7981 ttttaagttt actggatggt ctgattcatc atatggtgca ccataataca actgtgccgc
     8041 ttcatcatat tttacttcac cgacttgttc atccatcata tgtttgaata tatagtttgt
     8101 cgttgacagt acttcttttc gagaacggaa gttttgcgac aaatcaattc gacgtccagt
     8161 gccatctcca tctatagtaa agcgttgata cttttcaata aataaacttg gatcagcttg
     8221 tctaaattta taaatggact gcttaacatc tccaaccata aataaattac cattatgttc
     8281 atcacccgtt ttgatgcaag atagtatttt ctcttgaact cggttcgtat cttgatactc
     8341 atcgaccaat atttcttgga agtgttgacg gtatgattca gcaatttctg aaggcgaacc
     8401 atcctcatta gttaaaattt gtaatgcaaa atgttcataa tcagaaaaat ccagaatatt
     8461 tttgctacgc ttttttcgat tgaattctga cataacatct ttcacaatac gcgcaaggta
     8521 ctttactcgt ggcgccaatt gttgcatatc agctttcaaa tcatcagctt ctcttgaaaa
     8581 gtaatcactt ttcactttat caattaatga tttatatttt ttatactgaa gtttagcatc
     8641 ttctaaggca tcgaccatca tttcatttgc ttctttaatt ttcgctgtta tattaggcaa
     8701 acgcgcgcca aattcgtgac cagttaaata aggtatatca ataaagccac cttctaaaac
     8761 acgcctcatt aaacgtcgtt catcttctat aacagctaaa tgtttatcga cgccatccat
     8821 catactaaac aaatcatacg ccttatttaa agcatcatat gcagctgtga taaatacttt
     8881 agataagtct gttagtagtt gaataagttc cgcttgttgt gcttcttctt cgtatggtgt
     8941 caccaattga tccaaccaat ctgtaggatt tggatttgca acgctaaaga aatacaattg
     9001 tttaataatc attcgaaact gatcatcact tctatctgaa gacaattgct ctgttaattc
     9061 aataaaagca ggatcaagga tatcgtaatg ttgttctatg acttcatcta tcgtttgttc
     9121 taataataaa atattttcag cttcactgct tgttctaaag ttcgggtcaa tatttaatac
     9181 atcataatgc tgttgaatta atttcaagca aaaactatga agtgtagata tttgtgcttg
     9241 atgaattttg atgcgttggt ttttcaagtg tgcatttgca ggatcagcaa tcgatgcctc
     9301 ttgaatacgt tggtctacac gatgcttcat ttcacgtgca cttaagtttg taaacgttac
     9361 gactaaaagt cgatcgacat caatgccatc acgtaaaatc ttttggataa tacgctcaac
     9421 tagtacagct gttttacctg aacctgccgc ggctgcaaca agtacatctt gtccagttgc
     9481 gtaaatactt tgccattgcg cgtcagtcca aatcacgcct tgtggtttct ctggaattgt
     9541 catctattgc tcacccccaa attcatcatc aatgttaata ttttgaattg cttcaattgg
     9601 atttattgtt tcatctacag ttcgatatcg cttactatca atcatgccat ctacatgaca
     9661 taccgattga taactacaaa aagcacatgg caatttttgt ttgtacttta atggtgcaac
     9721 ttcagtatgc ccatccataa tatttgaagc tgtttctata aaattttctt tgttatgttg
     9781 gatgaattta taaatcgttg cttcatctgc aacttggctg cctcgtttac tcaaagagcc
     9841 atctttattc aaaccaactg gtacaatatc tgaagtgaat ttaggttcta aacgaatatc
     9901 caatgcatca ataacagttt ggtctgcatt cactaaacca ctcagcttaa actttttaat
     9961 taaatcttgt tctagtttat cttcatcaat atctgcccaa gatttaaatt taattctagg
    10021 ttcatgtaca tggaaatata ataatccgcc tggtttcaca atatctgtta atccaaggcg
    10081 ttgtttattt tgtaagacga tatccatgta tgtcatcatt tgcatttgca taccataata
    10141 tacttttgtt aaatcaagtg tcgcactacc ttcagaggat ttatagtcaa tgatattaac
    10201 aaaacttgta tcattctttg tatacgtatc gatacggtca atttgccctc taatattaat
    10261 tggaatacct tgagttgtcg ttaatgtttg tgcaattaat tcgtcatttg ttcttggttt
    10321 ccttctaaaa cttgtctcaa aatgttttgg cataaacttt gaatacgtgc cttgatattt
    10381 taatgcgctt agtgttgttt ctacaatagc gccaatgcgt cttgataaat aacgatagta
    10441 agctgaagaa tttaataaat taaactgaac tttaggtaaa atttcttcca atgcttcatt
    10501 cgttaattgt cttatttttt tcaggtctaa ttgtttaaaa tcgccattaa tacgttcaga
    10561 tatatatttt aaaacggaat ggaaaatatc acctaaatca aagttttgaa gttcatactt
    10621 cgttcgctca tttagtttca gaccatgtga cgcataatgt ttaaacgggc attgttggta
    10681 tccctcaaag cgagatacac tggcattgat ttccttacca tataaatctt tagacaacgt
    10741 ttcacctaat tttacagttt cattgtcaaa cgttaatgct gacattaaat aatctaaacc
    10801 ttgatttaaa tgatcgctat ctctaattac ttgataagca tctaaccaac tatcagccac
    10861 aatttcatca tctaaccaag cacgcaatgc ttcaaataat gtaattttgg tttgcttagc
    10921 atgttgcatt agtgacaatg ggttaacttc atggtattga ggaatgttag taatttccaa
    10981 ttggttgaac aatgattgaa tttgatttaa aaatgggctg atttccttat catcaccact
    11041 tgatcccatt agactataag aaaatgtaac atttccctta gctctagtca tagcaacata
    11101 acaaacaaat gcttcatcca tctgtaaaat atctgatgtt ggacttaact cgacattagc
    11161 ctgctgttca aagtatttct tttcttcatc tgtaatcaag cttgacgcag ttactggttg
    11221 tggcatcgta ccatcattca ttccaactaa gtaaacatgt tgcttattgt cgactttagc
    11281 caaatccatc gtaccaatac taacttgatc caatgtttgc ggaatcataa caaattctaa
    11341 ttgttctaaa ccaatatcaa atacttctaa gaaacgttcc atcgacattg gttcatctcc
    11401 aaatactaga actaagtcat cgaggatttg aattaagcca ttccatattt gatcaatttc
    11461 ttccgccttt tcatgattac catttaaatc aagttcatct cgctccgtca tcaattgatt
    11521 tggcagttca aaatattcca tactttcata aaaagcagtt gcaaagtctt ttacagttgc
    11581 tgcttgtgac atttgctttt caaaatgtaa aattttatca atgacatctt tctttaactt
    11641 aacgacttgt tcaaatgtgt tacgttcatc ttcggtcagt ttatgcgctt tacgccccat
    11701 tttgctaaaa tgttcgacat taaatagctc atcatctaac caacgtttac cgtatatacc
    11761 acgttcaagt acaaaatttt caagtaaatc aactaagtat gcacttttta gatatgatgc
    11821 cgttaacaca tcagtcttta ataagcgtag cattggatta acttgccaat tagattgaat
    11881 aacttcaatc aatgaacgaa tcatttccat gaccggatga tgtgtcatcg aacgctttgt
    11941 atcaatgtta taaggaatat tataaagcgg taatatggaa tcaaataaat aagcataaga
    12001 ctcgtcacga tataaaatag caatatcttt atatcgtaat tgcttatcac gaatatcaac
    12061 gatgatacgt cgtgcaattt catttatttc ctctctcata gtcgcagatt ctaaaatatt
    12121 gatatgacct tgacatgcca ctcgattgat ttgaagtgca tcaaattctt gttcaagatg
    12181 ctttaaatct tgattattaa agcgatataa ttgcttgaaa tattgacgtt caatagaaat
    12241 attgagttca tttgctattt cttcaatatg tcgtaacact tccgatggtt ttctaaataa
    12301 actgaattga tcgtggttac catctgtcgt caatataatt gtgacactct tcgcatattt
    12361 aattaatcct ttgattatta aatactcaat cgttgaaaag ttgtgaaaac catcaatata
    12421 tatatcagca cgttttagcc actctgattt cggcatacaa tcaataaaat attgtaatgc
    12481 atcctcaccc gtaataaact cgttttgaat gcgttgttcg aactctcggt atattaaagc
    12541 aatatcctct aacttatttt tagttcgagt ttgcatattt ttatcagcaa taaagctttc
    12601 taaatgttca ggcgttactg catatttttt aaaatcttga atttgttctg ttaatttttc
    12661 actaaaccca taatattttg cttgtgattg ataaagtttt aaatactttt gttgttcttg
    12721 aacaatgtta taaatcatca tttccgttgc agctttagat aacttttgtt cgctataact
    12781 accaacttct tggaaaatac gatgacttaa tcgttcaaaa tgcaacactt ctgttcttaa
    12841 actaccattt aattccgaat cattgacaaa ggcttgttct aattgaaatg tactttgagt
    12901 tggcgcaatt aaaatgattg gatctccaag cggatctgct ttcatttttt gttttatttc
    12961 ggtcaacatt ttcatagact tacctgttcc cgctctacct aaataagcat gtaatgtcat
    13021 gacaaaccct cacttccttt gacacatatt ttaacacaaa gtgattgtga ttgatttatt
    13081 ataagttcat ttcgaactta gcttttattg tggtactgac aaaataaaac atcgtttatc
    13141 agtattaaaa ccgacaaacg atgttgtatt tgtttcatat taatttttag tattttcagg
    13201 attgaaatta tatttaaatt cgctgaatgg ccagaatcta aatgaaactt taccaacaat
    13261 ttgatcttca tcaataaggc caaacgcacg gctatcttta cttacttcac gattatcccc
    13321 aagaactaaa tatttacctt ttggaatgac atttgattta gggttcgcat tcggtaaatc
    13381 tttaacttgg aaagtcccag taatgtaatc accttgttta tgttttaaat tgtagtttaa
    13441 atatggttca tcttgttttt tgccattgac atataatgta tcatttttat attctacttt
    13501 atcgccagga acaccgatga cacgtttaac atagtcatca tttttgtttg catggaagac
    13561 aactacatta cctttttcca aaccacctgt tttatatcca ataatgttta cagctactcg
    13621 ctcgccatct ttcaaagttg gatccattga ttcaccttta attgtatatg gtgtaacaat
    13681 aaatttacct actataaata aaatgacaaa agcgactgca attgaaataa tccattccaa
    13741 taattctttt ttcaattttg acacctcttt ttaagatttg aactgaatcg tccattttga
    13801 aaaaggataa tatctcaaac ttatattacc aataatatcc tttttatcaa ctaaaccaaa
    13861 ttgtctagaa tcatgctgat tgttatcatg atcatttagc acaacaaaat tgttaggcgg
    13921 tataatatct ccatctaatt ctttaaaatt gcgcaaacta aaatctttaa tttttctgtt
    13981 cttggcataa gatgcgtcaa ccggtcggtc atcacggtat aattgtccct gacgaaacgc
    14041 cattgattga ccaggtttgg caataattcg actagtatat atctcgttac cacgcctata
    14101 tgtaatgata tcaccattat tcaattgatt aaatgtaact ttaattttat ttacaataac
    14161 acgatcccct ttgttcaggg ttggtgacat atcattattc ggaatgacat gaccaactat
    14221 tacaaaagtt tgtacgaaca gtacaatgat aatagcaagt atcaatgaaa tcaaatattt
    14281 tacaactttt ttcacgatgt cactcctttt tcgaccccat aaaatgctgt tctaactttt
    14341 ttccaacaat ccaaaataca atcaacacaa ctaacattaa tatccctctt aaaggatgcg
    14401 ttaaaattgt agtaatttcc tttcctaaat aacctaaaat aattgttgaa actaactttg
    14461 atgatgccaa aacaataaaa taatatttag gtctaatatg agatagactc gctacaaaat
    14521 ttattaatgt atttggcgta aaaggaaaac atagtaaaat aaacaatggg attaatcctt
    14581 ggcgatcaat aaaactaatc aagcgttgaa cagcagtacg ttgtttaatt cgctgcatcc
    14641 tttcagtgtt caccaatcgt ttacagatca aatagactgt aaatgttcca gaaattaatc
    14701 caagccaact aatcaatata cctaaaatag gtccataggc ttgaatatta attaaaatat
    14761 agagtgctaa tggaaatact ggaataatcg ctcttatata taacaatatg aatccaggta
    14821 aataaccaaa ctgtcgaaat atctcaaacc attcttctac ttgatgaaac gacaaatcat
    14881 caatcccttt ctttggctga agataattat tcttacatta taaagttaat tactaagtaa
    14941 agaaacatta acatgtaatc atgctaataa atcagtctct agtagtataa caatattatt
    15001 gtatggcaga tattatttta tctttaattt tctcttaaca ttcttcgtct taagtatttg
    15061 tctaaacgta gcaaacgagc ctaggacctt tatatatctc agacacttac tgtcgttgaa
    15121 tacttgcact ttatatttta aaatttctca ttgcttttct aatccattgc ccatccatta
    15181 cttaaatttg ttaagtttaa cataagccca acaaataaaa gccaataaca atatgccact
    15241 aaaaacaaaa atatttatat tcgattttaa cgttacatta gtatttaata acccattaaa
    15301 acaaacaact gctgttaata atattaatac tatctgtatt tttctatata aactttccaa
    15361 cataaacctc tctttaaagt ttcttttaca gtgtaaatta taggtgctaa ttaaatatca
    15421 caaaacttac catcacttcg aacaagtaat ataattaatc tctttcatca ctatttattt
    15481 aatatacact tcgatgtaca atgtttattt tttatgcttt tcatttatag aaattatcat
    15541 cgtcaacaaa acactaaaaa cagcaattat taaaaacaaa cttgtattca tactaaccgc
    15601 ctcctataaa tatagttatc taataataaa tgcatgtaac ctaattctat accaatcaaa
    15661 atttttaata atataaaaag acaacttcta tttaaataac tctaatagaa attgcctttt
    15721 catttttatc aatgaactta atattcagct ctatatttat accattttat agattactaa
    15781 tcattgaagt aatatatttt ataaacgatc ttctaattct tttttcaagt cttcaaaacc
    15841 aggtttacct aataatgcga acatattttg tttatatgct tctacaccag gttggttaaa
    15901 tggatttacg cctaattggt atccactcat tgcacaagca agttcgaaga agtatatgac
    15961 ataaccgaaa gtttcttcat ctaattgtgg aatgttcact accatgtttg gaacaccacc
    16021 atcagtatgc gctaataatg tcccttcgaa tgcttttgtg ttaacttcgt cgattgtttt
    16081 accagctaaa taatttaatc cgtctagatc atcactatct ttttcaatag taatatcata
    16141 tttaggatga tttactttta caactgtttc gaataagaaa cgacggcctt cttgtacata
    16201 ttgacctaaa gaatgtaaat cagtagtgta gttggcactt gaaggataga tacctttgaa
    16261 gtctttacct tctgattcac caaataattg tttccaccat tcattaaagt attgcataga
    16321 tggttcatag ttaatcaaca tttctgttgt ataacctttt gcatataaaa tgtttcgaat
    16381 tgtcgcatat tggtatgcaa tgttttcttc taatttatct gaagataatt cttcacgtgc
    16441 ttttgcagca ccattcatca tagcttcgat gttaattcca gctgttgcaa ttggtaataa
    16501 tcctactgct gttaaaacag aatatcttcc acctacatca tcaggtacga tgaacgtttc
    16561 atacccttcg tttgtagcca actgttttaa agcacctttt tctttatccg ttgttgcaaa
    16621 tatacgtttt tgtgcttctt ctttaccgta tctttcttca actaattgtt tgaacaatct
    16681 aaatgcaact gctggttctg tagttgtacc agatttagaa ataacgttta cagagaaatc
    16741 tttgtctgct aaataatcaa ctaactcttt cgtatatgtt gatgataagt gattaccaac
    16801 aaatacaatt tcagggtatt cattgctgtt tctaaatgat gacgttaaca tttcgattgc
    16861 tgcacgtgca cctaaataag aaccaccaat accgatgact actaaaacat cagaattttc
    16921 tttaatgcgt tttgatgctt caacaattct tgaaatttct tctttgtcgt aatcaactgg
    16981 taaatcaacc cagcctaaga agtcactacc tgcaccagta ccttcatgaa ttgttttgtg
    17041 aattgattta acaatttctt gttgttgttt taattcgtgt tcaccgaaaa attctaacgt
    17101 tttactaaaa tctaattgaa tatgagtcat ctataaaagc ctcctgtttc atttaatatc
    17161 ttaattttac taagtttacg tttgcgattc aattcacaag tttgtactta atcaataaaa
    17221 ttgatattta tgtgacgttt cacacctatt tttcaacaaa catttcaatc tggcgtcaaa
    17281 cactcaaaca ttttttatac aatttgcatg ttttttaaaa caattttaaa cattgataaa
    17341 taagcattta tacttacaac tctaactacc tctatcatat tttatgaata aatatgtaaa
    17401 ataatggttt tattttcatt aaaagtttgc tatcatgtgt tcatacgaaa tattcagata
    17461 actacaatga ggtgaatttt atgaaagaga aaattgtttt agcatattca ggaggactag
    17521 atacaagtgt ggccgttcaa tggcttatcg acaaaggata cgacgttgta gcttgttgcc
    17581 tagatgttgg tgaaggtaaa gatttagaca tcgtttataa aaaagcttta gatatgggag
    17641 ctgttgaatg tcatattatt gatgcaacaa aagaatttag tgatgagtat gtaagttatg
    17701 caatcaaagg aaatttaatg tatgaaaatg catatccatt agtttctgct ttatcaagac
    17761 cattaatcgc taaaaaatta gtagagattg ctgagaaaac aaattcagta ggtattgcac
    17821 atggttgtac tggtaaaggg aatgaccaag tacgtttcga agttgccatt aaagcattaa
    17881 acccatcatt gaaagcattc gcacctgtac gtgagtgggc atggagtcgt gaagaagaaa
    17941 ttgattatgc aattaaacat aatatccctg tatcaatcaa ccatgattca ccttattcta
    18001 tcgatcaaaa cctatggggc agagcgaatg aatgtggtat tttagaagat ccttatgctg
    18061 cgccaccaga ggatgcgttc gatctaacaa atgctttaga agaaacacca gatactgctg
    18121 atgaaatcat tttaacgttt gttaaaggta tcccagttca aattgatggc aaaacatatg
    18181 aattagacga tttaatttta acgttgaatg cattagctgg taagcatggt atcggaagaa
    18241 ttgaccatgt agaaaataga cttgtaggta tcaaatcaag agaaatttat gaagcacctg
    18301 ctgcagaagt tattttaaaa gcgcataaag cattagaaac gattacgtta acgaaagatg
    18361 tcgcacactt taaaccaatc atcgagaagc aatttgctga acaactatac aatggacttt
    18421 ggttctcacc tttaactgat agcttgaaat tatttattga tagtactcag caatacgtaa
    18481 gtggtgatgt cagaattaaa ttattcaaag gtaatgccat cgttaatggt agaaaatcac
    18541 cttacacatt atatgatgaa aaattagcaa cttatacaaa agaagatgca tttaatcaag
    18601 acgctgctgt tggctttatc gatatctatg gtttacctac tcaagtaaat gcgatgttac
    18661 atggaggcta tagcaatgag caataaagct tggggcggta gatttgaagt acaacctgaa
    18721 gagtgggttg acgactttaa cgcatccatt acttttgatc aaacgctcat agatcaagat
    18781 atcgaaggca gcattgcgca tgcaactatg cttgcgaatc aaggcattat tagtcaacaa
    18841 gacagcgaac aaattataca aggactaaaa tctattcaac atgattatca tcaagatcaa
    18901 attcaattta gtgcatcatt agaagatatt catttaaata ttgaacatga attaattaaa
    18961 cgtattggtg atgctggtgg taagttgcat actggacgca gtagaaacga tcaagttgca
    19021 acagacatgc acttgtacac taagaaacaa gtgcaagata tcatcgcatt aattaagtcg
    19081 ttacaaagtg taattgtaga catcgcttcc aataatgttg atacaattat gcctggttat
    19141 actcatttac agcgtgcaca gccaatttca tttgcacatc atattatgac ttatttttgg
    19201 atgttacaac gagaccaaca acgatttgaa gatagtttaa aacgaatcga tattaatcct
    19261 ttaggtgcag cagccttaag tggtaccaca taccctatcg atagacacga gacaacagca
    19321 ttgttgaact ttggcagtct ctatgagaat agcctagatg ctgttagtga cagagactat
    19381 attattgaaa cattgcataa tatttcttta acgatggttc acttatcacg ctttgcagag
    19441 gaaattattt tctggtccac agacgaagct aaattcatta cattatcaga tgcattttct
    19501 actggctcat ctattatgcc acaaaagaaa aatcctgata tggcagaatt aattagaggt
    19561 aaagttggtc gaacgactgg tcatttaatg agcatgctta tgactttaaa aggattacct
    19621 ctagcatata acaaagatat gcaggaagat aaagaaggtt tattcgatgc tgtccataca
    19681 attaaaggtt ctttacgtat tttcgaaggt atgattcaaa cgatgacaat taataaagaa
    19741 cgactcaatc aaactgttaa agaagatttt tcaaatgcaa cggaactagc agattattta
    19801 gtaactaaaa atattccatt tagaactgca catgaaattg taggaaaaat cgtcttagaa
    19861 tgtatacaac aaggtcatta tttattagat gttcctttag caacatatca acaacatcat
    19921 tctagtatcg atgccgatat ttacgattat ttgcagcctg aaaattgctt gaaacgacgt
    19981 caaagttacg ggtcaacggg tcaatcatcg gtcaaacaac aacttgatgt tgctaaacaa
    20041 ttactgtcac aataaatacg ttaatctacc tacccacaat gtctataaaa attacattgt
    20101 gggtatttta atgctctctt cgtcttattg aacatcacat ttttaatatt cctaaaatgt
    20161 ttgataattc ttttaaattt atattacaaa aatgttataa attgtaaaag aaatgtgtaa
    20221 agcgttttca caagcaggtt tttgtagtat tttaaaattg ttagactaca aataaagaga
    20281 tgaaaggata aagactatga ctaactcttc gaaaagcttc actaaattta tggctgcttc
    20341 tgctgttttt actatgggat ttttatcagt acctactgct ggcgctgaac aaacaaatca
    20401 aattgcaaat aaacctcagg ctattcaatg gcatacaaat ttaacgaatg agcgattcac
    20461 tactatcgca catcgtggcg caagtggcta tgcacccgag catacgtttc aagcatatga
    20521 taagagtcat aatgagttaa aagcatcgta tatcgaaatt gatttacaac gtaccaaaga
    20581 tggccattta gttgctatgc atgatgaaac agttaaccgt acaacaaatg gacacggtaa
    20641 agttgaggat tatacccttg atgaattaaa acagttagat gcaggaagtt ggtttaataa
    20701 aaaatatcca aaatacgcaa gagcaagtta taaaaatgct aaagtaccca ctttagatga
    20761 aattttagaa cgttatggtc cgtatgcaaa ctattatatt gaaacaaagt cacctgatgt
    20821 atacccagga atggaagaac aattattagc ttcattgaaa aagcatcacc ttttaaataa
    20881 caataaatta aaaaatggac atgtaatgat tcaatcattt tctgatgaaa gtttaaagaa
    20941 aattcatcgt caaaataagc atgtgccatt agtaaaatta gttgataaag gtgaactaca
    21001 acaatttaac gaccaacgct taaaggagat acgctcttat gcgattggat taggacctga
    21061 ttatacagat ttaactgaac aaaataccca tcatttaaaa gacttaggat ttatagtaca
    21121 tccttataca gtaaatgaaa aagctgatat gttacgatta aataaatacg gcgttgatgg
    21181 tgtctttaca aatttcgctg ataaatataa agaagtcatt aaatagtatt gttaaactag
    21241 aaaacataaa tacaaaaata tagctattac tataaaaaac agcagtaaga tatttccgaa
    21301 tagaaaatat cctactgctg tctttttgct caattatata tagttgagcg tttaattaga
    21361 aattctctgt gttcggggcc accccaactt gcattgtctg tagaaattga ctccccaatt
    21421 tctctgtgtt ggggccccgc caacttgcac attattgtaa gctgactttc caccagcttc
    21481 tgtgttgggg cccgccccaa cttgcattgt ctgtagaaat tggctcccca atttctctgt
    21541 gttgggggcc ccgactattt ttgaaataag cttgttacac gggcattgtt ttacagtcaa
    21601 ctactgctaa aataaaatta acgagcttag ggctttgttt tctgtcccaa gctcgttaaa
    21661 tcacatatga taattaatta tgcccaacca cgatatctag ctgcttctgc tgtacgttta
    21721 atacctatga tatatgctgc aagtctcata tctatttttc gattttgaga caattcgtaa
    21781 atcgtatcaa atgccgcttc taatttttca cgtagctttt catttacttc ttcttcagac
    21841 caataataac cttgattatt ttgtacccat tcgaagtaag aaaccgttac accaccagca
    21901 cttgctaata cgtctggaac taataatata ccacgttcag ttaaaatacg tgttgcttct
    21961 ggtgttgtag gtccattagc agcttcaaca acgatactag ctttaatatc atgtgcattg
    22021 tcttctgtga tttggtttga aatagccgct ggtactaaaa tgtcacaatc taattcaaac
    22081 aattctttat ttgagattgt ttcttcaaat aaatttgtta ccgtaccaaa actatcacga
    22141 cggtctaata aataatctat atctaagcca tttggatcgt gtaatgcacc gtaagcatca
    22201 gagataccta caatttttgc acctaaatca tataagaatt tagctaagaa acttccggca
    22261 ttaccgaaac cttgaataac aaccttggca ccttcaattt gcatattacg acgttttgca
    22321 gcttgttcaa ttgcaataac tacacctagt gcagttgatc tgtcgcgtcc atgagaacca
    22381 cccaatacaa ttggtttacc tgtgatgaaa cctggtgaat taaatttatc taatgcacta
    22441 tattcatcca tcatccaagc cataatttgt gagtttgtaa atacatctgg tgctggaata
    22501 tctttgttcg gacctacgaa ttgtgaaatt gctcttacat atccgcgtga taaacgttca
    22561 acttcatgaa tgctcatttg acgtggatca caaacgatac cacccttacc accaccgtat
    22621 ggtaagttaa caatgccaca tttcaaagtc atccacattg ataatgcttt tacttcttct
    22681 tcatcaacat ctgggtggaa acgcacgccc ccttttgttg gtccaacagc atcattatgt
    22741 tgcgcacggt aacctgtaaa tgttttaaca gtgccatcat ccattcgtac agggatacgc
    22801 acttgtaaca ttcttaaagg ttctttaatt aaatcgtaca ttccttcgtc aaatcccaat
    22861 ttatgcaatg cttctttaat aattccttga gtagaagtta ctaaattatt gttctcagtc
    22921 atgatccttt tcgcctcttc tttacctaat gatttcgctt tcaaacatat tgtaacataa
    22981 cgtattcctt tttaaagccc ttacaaactg attgttacaa ctttttgaca ttattgaaat
    23041 acatgtctta ttttttcaag tgcaaggtcc aattcttctt tagtaataat taatggtggt
    23101 gcaaaacgaa tgacagtatc atgcgtttct ttacataata aaccttcttc tttcaaagct
    23161 tcacaatatg gtctagcact ttcattaagt tccacaccta taaacaaacc acgtccacgg
    23221 acttctttaa ttgatggatg atcaatttgc tttaattgtt ctttaaaata atctcctaat
    23281 tccaaagagc gccctggtaa atcctcatca acgataacat ctaatgcagc aattgatgca
    23341 gcacaagcaa gtggattacc accaaatgtt gaaccatgtg agccaggtgt aaagacatct
    23401 aatacttctt tatctgctaa tacaacagaa attgggaaga caccaccacc tagtgcttta
    23461 cctaaaatat agacatcagg ttttacatta tcccaatccg tagcaaataa tttacccgaa
    23521 cgacctaatc ctgcttggat ttcgtcagca ataaataaga cattatgttc atcacataat
    23581 tctctaattg ctttcaaata tccttctggc ggtatattta tacccgcttc accttgaatt
    23641 ggttctacta aaactgctgc agtattttca ttaattgcag ctttcaatgc atctacatct
    23701 ccaaaatcaa cttttctaaa tccatctaat aacggaccat aaccacgttg gtattctgct
    23761 tctgatgata atgaaactgg cgccattgtt cgaccatgga agttaccatt aaatgcaatg
    23821 atttctgctt tatttggctc aattccttta acatcgtatg cccagcgtcg tgctgctttc
    23881 aaagctgttt ctactgcttc agcacctgta ttcattggca aagctttatc tttacctgcc
    23941 agtttacaaa ttttttcgta ccattctcct aagttatcac tatgaaaagc acgtgaaact
    24001 agagtcactt tatcagcttg atcttttaat gcttgaataa ttttcggatg tctatgacct
    24061 tggttaacag cggaatatgc agataacata tccatatatt tattgccttc aggatcttta
    24121 acccataccc cttcagcttc tgaaatgaca attggcaatg gtaaataatt atgtgctccg
    24181 taatgatttg ttaactcaat aattttttca gatttagtca tcatatctcc ccttttcatc
    24241 atttataact attatacatg aaacattatc caaataatta cattagtttt caaagcagat
    24301 acttttccac caaaaaaaga tgaaataatc actaagtttc attaaatttg tctattttga
    24361 aaacccttac atttataatg acataattac ttaaatgatt acaagcaaaa gaattgataa
    24421 ttttacactt aatcaaaagt atattttact aagaatattt ttaattataa atattgaaaa
    24481 ccactaacaa attgcataca caatatcatt agtggtaaca gttaaacact tatttatctt
    24541 tacgtggtaa tggatagaac ccttcattaa attgatgcca taaattagga gttaagtgat
    24601 gattatcttc tctctctgga tcaaagtaat taataatttc atcttcccgt ccatctttaa
    24661 ttttttcaac aaattgataa tccagtagta gctctctacc aatggctact aagtcaacac
    24721 caacattttc aactgcatct aaagcttcgt cagctgtgaa aattgaacct ataccgataa
    24781 gtggcatacg accatttatc catttgtgaa ttaaaggcag tctttcttgt ccagcgtatt
    24841 taccttcacg tgtcgttgca tgcgtatcca tcattgaaac atgaatatag tcgattggca
    24901 tatggctaat tttattaacg agttcctctg taatttccat tgtgattcct ggagactccg
    24961 cttcctctgg agataatctg tatccaacta taaagtctct attgccatac gcttctttcg
    25021 ctttaagcac ttcttcaatc acagcgaccg ggaatttata ttgatttgcc catacatcat
    25081 ttcttctatt atagtatggt gatacaaatt gatgaattaa gtaatgattc gcgccatgta
    25141 tttcaacacc atcaaaccct gcttcaattg cacgtcgtgt tgcttcacca aaatccttga
    25201 ttgcttgttc aatctcttca ttcgtcattt ctctagcact atgttcttgt ttctgaccga
    25261 aactttttaa agaaattgga cttggtgcta cgacgtctcc atcaggtgtt aattcaggca
    25321 atgcttgtgc accgccatga tgtatttgta cgagtgcttt ggcaccgttt ttcttcattg
    25381 ctgtagctaa ttgttttagt ccttcaatat cactgtcatg cgcgattgat ggctgtcctg
    25441 gaaatgcttt tccgacatca ctcacattac tcgcagcatt aattgtaata ccaacatctt
    25501 gtgaacgctt ttcaatataa ggaagttcta catctgaaat agtaccatca tcatttgaag
    25561 aaatatgtgt taaaggggct aacacaaatc gatttctcaa ctctactcca tttggtaatt
    25621 ctactttatc aaacaatggt tcgtatttac ttttcattac ttaattcctc cttaaaatta
    25681 ttgagttgac tataacatgt aattttttca ttctccaatt atctgtttat atagttacat
    25741 ttcgtttaat actttaagtt gtagttctca tttctaaaat aaatttaaaa aacaaatcca
    25801 catacatcat tgcaagtcaa cgattctatc taacaaagat aatggatatg tcaccttaaa
    25861 ccatttgtaa gtgtaaatag aatcaatcat attacgttat cgtagacaaa aagagattag
    25921 tatctaataa aatttgatag atactaatct cttttatagt ctaagaaact ttcatttcag
    25981 accctttgta tgattttcgg tacgatttat ctgttccttt agtcgtttcg aattgctcgc
    26041 tttgactgtt ttatccagat tggtaagcgt tctttaagtg tttgaaaccc atatttttct
    26101 gtttctctga tttcatctaa tactgattgt ttttccttct tacgctcata atttttgaag
    26161 taatcattat cctttaatga tagattaagc tttccttcat catctataga caaaatttta
    26221 gctttaacaa tttggccttc tgatagaaat ttcttcaaat tatgaacgta gtcatccata
    26281 atttctgata tatgaatcag tccttcagta tgattagggg tctcaacaaa cgcaccgtat
    26341 ggttgaatac cagttacacg caccttgata tgttggccaa ttttgtagtt attcaactta
    26401 ataacccctt atttcgttta cttaacacta ttatcatagc acaaatcgaa atggtggact
    26461 aattaaaaca tcaaatcata cgaatattat tttataaatg aataagaatt ctacaaactt
    26521 ggatttacaa ataaaatcag caacaaattc ctatctaaac caatatgata tccagctact
    26581 ttgttttcaa tttattaact atttgaatag caattctctg taaaacataa aaagcaacct
    26641 caactattat ctttagaata cacatctatt taaaaactgt gctttcttga taaatatatt
    26701 aagattgctt atcatgttag tttatttgtt ttagttggaa tatatactaa tccattcata
    26761 aattagcttt atccgagttt aaaatgttgg tagttaatta tgtttagata ttattcttca
    26821 acatcaatag attcaattac aacatcatga agtggtttat cttgtggtcc cacttttgta
    26881 tttgcaatat cttctaatgt agtttcacca tcaatgattt gaccgaatac tgtatgtttt
    26941 tgatctaacc atggtgtacc acccttctcg ccatatgcat caacgattgg ttgtggccaa
    27001 ccaccatctg caagttgact taacatattt tgaggtactt ctttcatttg aacaatgaaa
    27061 aattgtgaac cattagtatt aggtcctgag ttagccattg ataatgcgcc atataagtta
    27121 aatgcattta atgaaaattc atcttcaaaa gcaccgccat aaatactttc gccacccata
    27181 ccagtagctg ttggatcgcc accttgaatc atgaagtcat taatgacacg gtggaatgtt
    27241 attccatcat aataaccatt ttttgcatgt gtcacaaaat tttcaactgt ttttggtgca
    27301 atatttggaa ataatttgaa tgtcatgtca cctttatttg tgtgcataac cactttaatt
    27361 tcaccttgtt gtacttcttt gtttaactgt ggatagttag ccatttatat tctccattca
    27421 tgttatgata catatatatt aacatacttt taagggagga aaatagcatg aagctatatc
    27481 gattttcaca caaaacaggt agctatggtg tcacgattgt tgaagaaaat ggagacgatg
    27541 tacttgttaa agttgaacaa gttatcaaac acccgaaaca aggtgattta cataacccta
    27601 ctgaaactga aggtgtattt ttccatgaac gcaaagcatt aagccatttt gaaaaacgct
    27661 atacgaaacg ttcacaatta cgcgacttca atgttgatgt attgcgctat gaagattcac
    27721 ttcaacaagc aattacagat ttagaaacta aacttaaagc tcagcaaaca aaacatgctg
    27781 aaatgtcttt agctagttta gcacgcttaa aagaagatta ttcacttcaa tacaaagaaa
    27841 attttaaata aaaaatgacg tgtttcttct tatttaaata cttctgaaaa taaagcacaa
    27901 caaggagtgt gtacgttttt cagaactata tcattcatgt ataatgaata acataaatat
    27961 tttttaaagg aggacaacat agtgagtttg ttacatattg cggtgatatt accgttaata
    28021 ttcgcactca ttattcctat cctgtataga ttttttaaac gtatacattt aggatggttc
    28081 gtattacctg tccctatcgt catatttatt tatatgctta cattaattaa aacgacgatg
    28141 tcaggtaata ctgtaatgaa aaccttaaat tggatgcctc attttggtat gaactttgat
    28201 ttatatcttg atggcttagg tttactcttt agtttgctta tttcaggaat cggcagttta
    28261 gtagtattat attcaatcgg ctacttaagt aagtcagaac aactagggaa tttttattgt
    28321 tatttattac tatttatggg tgcaatgtta ggtgtcgtac tttcagataa tgttattatt
    28381 ctatatttat tctgggagct aacgtcattt tctagttttt tacttatttc attctggcgc
    28441 gaacgacaag catctatata tggtgctcaa aaatcgctca taatcacagt atttggtggt
    28501 ctatcattat taggtggtat catcttactc gctataccaa cgcaatcatt tagcattcag
    28561 tacatgattc aacatgcttc tgaaattcaa aatagcccat tcttcatttt tgcgatgatt
    28621 ttaattatga ttggtgcttt tacaaaatct gctcagtttc cattttatat ttggctacca
    28681 gatgcaatgg aagcacctac accagtcagt gcttatcttc attcagcaac aatggttaaa
    28741 gcagggttat atttaatcgc tcgaatgaca ccaatcttcg cagcatcgca aggttggata
    28801 tggactgtca cactcgttgg tttaattacg ttattctggg cttcgctaaa cgcaacaaaa
    28861 caacaagact tgaaaggtat actggcattt tcaacagtat cccaattagg tatgattatg
    28921 gcgatgcttg gaatcggtgc cattagttat cactatcaag gcgatgatag caaaatatat
    28981 gctgctgcat ttacggctgc aatattccat ttaatcaacc atgcaacatt taaaggtgcc
    29041 ctatttatga ttacaggtgc agtggatcat tctactggta cacgtgatgt taagaaatta
    29101 ggtggcttac taacaattat gcctatttca tttacaatca ctgttattac ggcattaagt
    29161 atggctggtg taccaccgtt caatggtttc ttatcaaaag aatcattttt agaaacaaca
    29221 tttacagcaa gccaagcaaa tttattcagt gttgatacat taggctacct attcccaatc
    29281 attggtatag tgggcagtgt cttcacattt gtatattcaa ttaaatttat aatgcatata
    29341 tttttcggac aatataaacc tgaacaatta cctaaaaaag cacacgaagt atcaatatta
    29401 atgcttttat caccagctat tttagctaca ttagtaattg tatttggttt attccctggc
    29461 attttaacta attcgattat tgaaccagct acatcttcga ttaatcatac ggtaattgat
    29521 gatgttgaat tccatatgtt ccatggatta acgcctgcct ttttatcaac attagtgatt
    29581 tatattttag gtatcttact aattgtgaca tttagttatt gggtaaaatt gttgcaacga
    29641 caacctggta aactaacatt caattattgg tacaacagaa gtgcaaatgt tattccaaac
    29701 tactctgaaa agatgacgaa tagctatgtt accgattatt cacgtaataa tttagttatc
    29761 atttttggtg cattaatttt attaacattt atcactgtat tctcagtacc tttcaacatt
    29821 aattttaaag acgttagtcc gattagaatt ttcgaagttt gtatcgtaat tttattatta
    29881 agtgctgcct ttttaattct tttcgctaaa tcaagattat ttagcatcat tatgctaagt
    29941 gcagttggat atgctgtgtc tgtattgttt atattcttta aagcacccga cttagcattg
    30001 acacagtttg tcgttgaatc tatttcaaca gcattgttct tattatgctt ctaccactta
    30061 ccaaatttaa atcgttataa tgaaaagcgc tcattccagc ttactaatgc tttaattgct
    30121 ggtggtgttg gtttgtccgt cattattatc ggtttaattg catacggaaa tagacatttt
    30181 gaatcgatat ctaagtttta tcaagagcac gtttatgatt tagctcacgg taaaaacatg
    30241 gtaaacgtca tacttgtgga tttccgtggt atggatactt tattcgagtc atctgtgctt
    30301 ggtatcgcag gattagctgt atatacaatg attaaattac gtaaaaagcg tcaaacgcaa
    30361 ggtaacgagg tgaaaaatca tgaatagaca acaaaatgat ctaattttgc aatttgctgc
    30421 agttattatc tttttcatgg taatggtctt tggtttttca cttttcttag caggacatta
    30481 tacacctggt ggcggtttcg tcggcggatt attattcgca agttcacttg ttatcattac
    30541 gattgcattt gatatagaaa caatgcgtaa aattttccca ttagatttta aaatcttgat
    30601 aggtatcgga ttagtttttt gtattgcgac gcctatcgca agttggtttt taggcaaaaa
    30661 tttctttacg catgtcacat ttgatatacc gttatttata ttagaacctg ttcatatgac
    30721 aacagcagta ttctttgatt tcggtgtttt atgtgcagta gttggtactg tcatgacaat
    30781 tattatttcg attggagaga acgaatagtg gaaattatta tgatttttgt tagtggtatt
    30841 ctcacagcaa ttagtgtcta tctcgttttg tctaaaagtc tgatacgaat tgttatggga
    30901 actacactac taacacatgc agcaaattta tttttaataa ctatgggtgg acttaaacat
    30961 ggtactgttc caatttatga agcgaacgta aaaagctatg ttgatcctat cccgcaagca
    31021 cttattttaa cagcaatcgt tatcgccttt gcgacaacag cctttttctt agtattagca
    31081 tttagaacat ataaagaatt aggcacagat aacgttgaga gtatgaaagg agttccagaa
    31141 gatgattgaa agtaatatgc ttgtgttaac gctcgtcatt ccagtaatta cagccatatt
    31201 acttgtcttt attggaaagc gtcctattat aaagcgttat gtcgcactag gcggtacatt
    31261 attaaccttg gtcgcggcaa ttatcaattt agcaaatgtt gtaaaacatg gaccattacg
    31321 agttgaacta ggttcatgga aagcgcctta cagtattgtc tttgttttag acatattcag
    31381 tgccttacta attattacta gtattattat tacagctatt gtgattttat attcatacca
    31441 aacaattggt attgaacgtg aaagatatta ttattatttt tcagtactat ttatgttaat
    31501 aggtatcatt ggtgccttta caactggtga cattttcaac ctattcgtat ttttcgaagt
    31561 atttctaatg tcatcatatt tcttattagt tataggttct acaaaaatcc aattacaaga
    31621 aacaataaaa tatgttcttg ttaacgttgt atcatcatcc ttcttcgtaa tgggtgtagc
    31681 gattttatat tcagtagtag gaacattgaa tctagcagat ataagcaata aattagctaa
    31741 cctttcagcg catgacagtg gcttagtcaa tatcgttttc atactattta tctttgtttt
    31801 tgctacaaaa gctggcgtat tcccaatgtt tgtttggtta cctagtgcat actatgcacc
    31861 accaattcca atcattgcat tctttggcgc tttgttaaca aaagttggtg tttatgcaat
    31921 cgctagaaca ttgagcctat tctttagtga taatgtaagc ttttcacatt atgtcatttt
    31981 attcttagca ctattaacga tcatctttgg ttgtgtcggt gctgttgcat atgccaacat
    32041 taaaaaaatc atcctataca atgtcatgat tgctgtaggt gtgatcttag tcggcgttgc
    32101 aatgatgaca gagtcaggta tgattggtgc tatttactat acattgcatg acatgttagt
    32161 aaaacttgca ttattcttgc ttatcggaat tataattaaa attacaggca ctgctgattt
    32221 aagacaattt ggtggcttaa ttaaacgata tcctgtactt ggttggtcat tctttattgc
    32281 agcattaagt ttagctggca ttcccccact cagtggcttt tatggaaaat ttttcattgt
    32341 ccaatcaaca tttgaaagag gattttattt gagtggtgtc atcgtcttat tatcaagttt
    32401 agtcgtatta tattctgtca ttcgcatatt cctacaaggc tttttcggtc aaccaaaagg
    32461 atatgatctt aataacaaag tcgacgtcaa atatttaact acgattgcaa tcgttgcagt
    32521 tgtgataact gttttatatg gattgtcagc agattactta tatccaatgg taaaagctgg
    32581 tgcagaaaca ttctacaatc catcaaccta cgttaaagct gtattaggag gtaaataaca
    32641 tggctgtaca attagtatta aactttatta tcgcagtgtt ttggttgttt gtgacaaata
    32701 gttacacaac aaataacttt gtgttaggtt tcatctttgg cctagttctt gtttacctct
    32761 tacacagagt gttaccaggt agattttatg tcatcacgct atatcgtatt attaaattaa
    32821 ttattatttt cttaatcgaa ctgattaaag ctaattttga tgttttgaaa attattatta
    32881 aaccttcgat taaaaatgaa ccaggattct ttgtttatca cacagattta aaaaaagatt
    32941 ggcaaattgt cttgttgtct aatttaatta cattaacacc tggtactgta gtgcttggtg
    33001 taagtgatga tcgtacaaaa atttatattc atgccataga tttttcaact aaagagcaag
    33061 aagtagaaag tattaaaaca tcattagaga aaattgtaag agaggtgggc gaaatataat
    33121 gaatcataat gttattatcg ttattgcatt aatcatagtt gtcatttcta tgttagctat
    33181 gctcattcgc gttgtgctag gcccatcact tgccgatcgt gttgtcgcat tagatgcgat
    33241 tggtcttcaa ttaatggcag ttatagcatt attcagtatt ttattaaata ttaaatacat
    33301 gattgtcgtt attatgatga ttggtatatt agccttttta ggtactgcag tattctctaa
    33361 atttatggac aaaggtaagg tgattgaaca tgatcaaaat catactgatt agtcttgcac
    33421 ttatctttgt tatcatcggt gctttaatta gcgccctagc agccatagga ttattgagac
    33481 ttgaagatgt atattcacgt gcacatgctg ccggaaaagc atcaacatta ggtgcaatgt
    33541 cattactatt tggtacgttt ttatatttta ttgctactca aggttttgta aatatgcaat
    33601 taatcgttgc gattatcttt gtattaatta caggtcctct ttcaagtcat atgattatga
    33661 aagcagcata taatattaaa acgccttata ctaaaaagac taaagtcgat gaaatttcgg
    33721 aagacttaaa agacacaaaa ttgtagatta tttaacaaag tcataaatat aaatcaacaa
    33781 caaacagcag taagatgatt ccaaattagg aatgatttta ctgctgtttt cttttgacat
    33841 tgttacctct ttttcaatga atttagttta gtacatactt ctttgactac agcttcgccc
    33901 tatctacgta tatctcttta atttaattgc ctttcatgtc gttatgtatt atgataataa
    33961 taattataaa tcgtaacgat tacgctttaa aaagagagag gttttattat gcattggaca
    34021 attatcggcg gtggcataca gggaactgca atcgcacaaa aactattatc aagcggatta
    34081 acaacagacc gattaacaat cattgaccca cacgaaactt tttgccaaag gtttaactca
    34141 tatacaaatc gaatagaaat gccttattta agatcaccga ttgtacacca cgtacatcca
    34201 caaccgttcc atctaaaaca attcgctaaa cagcaccaat atacaaatgc tttttatggt
    34261 ccttatcagc gacctgaatt gacaatgttt atggatcata ttgcacatgc ttctaaacaa
    34321 tatcaattag aggattgctt ggttcaaggt ttagttcaaa ctttagataa acaagaagac
    34381 aaatggcata tcaagttaga agatggacaa attatcacta cagattgcgt cgttattgca
    34441 ataggtagta caaatattcc gtttatgcct gacattttaa aagacaaaca aaatgtaaat
    34501 catatcttcg agaaagaaca tgatcaagta gtatatgata agaccgatca tatcgttggt
    34561 agtggcatta ctgctgcaca tcttgcactt aaattgttaa atcatgatga cgataaaaag
    34621 attcatttat ggctaaataa agatattgag atacatgact ttgatgctga tcctggttgg
    34681 ttaggtccga aaaatatgtc ttcattttta agtactaaaa gcatgcctga aagaaatgcc
    34741 attgtacaac gtgaacgtca taaaggatca atgcctcacg aactgtactt acgccttaaa
    34801 aaacatatta aaaatggtcg tataaatgtg cataaaacac ctatcactca aattagtgat
    34861 ggtttaatta acactgaaaa tgattctgtt ccatatcaac agattatggt tgcaactggt
    34921 tttgaacaag attttatgtc acaaccactt attaagcaat taatacaaaa ttatgatgca
    34981 cctatcaacg aatgtaatta ccctgttatt tccgaaaaat tagaatggat accaaatcta
    35041 tttgtcgcag gatgctttgc agacttagaa ttaggaccat ttggtagaaa tgttatgggt
    35101 ggccgtaaag ctgccgaacg cattgaacaa gcatttctaa aactacaaca atatagcgca
    35161 taaaaaaact gctagccgta gttatgaata tctcataaca tttcagctag cagttctttt
    35221 attttaaagg tttaatagca actgtaccac gcataactgt aattaattgt tctttgtcat
    35281 tcttaatttt tatatcccat acatgtgtcg acttaccttg atgaataatc tcagctgtcg
    35341 cagtaacacg accatcttta gcagaatgaa tatggttggc attcatctct aaacctaatg
    35401 gaataaattt ggttgtatca attagattag cagatcctaa tgaacatgct gtttcaccta
    35461 aagcaatcga agcaccacca tgtaaatatc caaatggttg ttttacttta tcagtaacag
    35521 gcatagaaat aacaactaaa ccatcttcct ggtgatctat tgacatctca aatgtctcta
    35581 ataaatgagt catattttca cctctttatg cttatagtac catagcagca atagtaccga
    35641 aaatcattaa aggaatatta taaaacaaga agtttggtac acaagtatcg cgtatatgat
    35701 catgttggcc atcaacattt aatcccgcag ttggtcctaa tgttgaatca cttgcaggtg
    35761 aacctgagtc acctaatgca ctcgctgttc caatcaatgc gattaatgcc atagtatcta
    35821 gtccaattga cgctccaaaa ggaatgaata atgatgcgat aataggaatt gttgcaaatg
    35881 atgatccaat acctaaagtg acaattaaac ctatcacata catcatgata atgctaaata
    35941 atttattatc accagtaata cttgttaaag ttttaactaa ttcatctata tcaccagtag
    36001 cattcattac accagcaaat ccatttgctg ttaaaataac tacaccaata taagccataa
    36061 ttttaatacc ttcaacaaac ttagcatcta attcatacca attatatgca cgtgaaataa
    36121 agaatacgag taccccggcc agtgcaccaa aaatcattga atctgtaaat gtttgtacta
    36181 aaaatgtagc tagtattgct acaattgtta ctattaagat atatggtttt aactctgtaa
    36241 cattgtcact atctgaaatt ttacgtgttt catattcacg tggtttacga tatacatata
    36301 agccgataag taagccaaca atatacccca ttgaaggaat aagcattgct ttccaaatca
    36361 tattaaactc aattgggtga ttcgcctttg caaagccact ttgaataatt tgttggaaaa
    36421 tttgaccgaa tccataaggt aataacacat acgggaaaca taaaccaaaa ccgataatca
    36481 aaccgattaa acgtctatct atttttaagt cattaaacag acttaacaat ggtggaatga
    36541 caattggaat gaatgcaata tgtacaggaa ttaagttttg actcatgata ctcatagcta
    36601 ataatgcaat aattattgtc acttttactt taactcttga ccatcgacta ttttcagcgt
    36661 gaattgcatt tataattttt cctactaaat agtctgtgat accactgtat gaaattaatg
    36721 ctgcaaatcc acctaataag gcatagctta atgctacctc agcaccatcg actatatttt
    36781 tcccaaatac atttataact ttttcaatgc tcatgcctga aattaagcca ccaactagcg
    36841 cactgataaa taagcttata actacgttta atcgacataa acatagcaca atcattaata
    36901 ttactgctat tactactgca tttatcatat gacaaccatc ctttatcact atatcgaact
    36961 aaagcgttta tagactacat agtatcagta gctttaacac ctgtcaatag caaactatac
    37021 taataatctt tattttttag ttaattgtct ttcttaaaat aattttcgct ttcattaaat
    37081 taaacaattt tacaagactg gaacaccaat caaaatccta agttctataa tgttatatta
    37141 gtagtcgttg actgaatgaa catatgctta taatacgttt ttgcaatgct agtcaagttg
    37201 atttatgctc ataaggatat gcgatttata ttttcttaca acaatgaaaa tgcctgatac
    37261 aatgcgatcc tttatacttt caagagttaa attagaaatg tataacaaga cacaagttgt
    37321 atcaggcaaa taattaaatt attgttgttt taaccattgt actatcgtcg gaatcataaa
    37381 tcctgttggc ccttttggac cattatatga agctttatta gtcgttgctg gacctgcaat
    37441 atcgaaatga atgtgaggtg tttgaccact aaaatgtgtt acaaaacttg ccgcaaatag
    37501 cgctttacct tgtccattcg tatggttaac taaatcagcg atatcactgt gtttaatact
    37561 tgcacgttcg gttgcagtaa tcggtaattc atataccatt tcatcgactt tagaacttat
    37621 ttgtaatata tcgtttaata tcactttact attcgattca aatgcagcag ctttatcatc
    37681 gcctagtgca acaattgctg cacccgttaa tgtagcaaag tccataatca cgctaggctg
    37741 atattgattt gcataataca cagcatctgc aaggactaat ctaccttcag cgtctgtatt
    37801 cattacttct acagtttcac cacttaatgc tgtaaataca tcatctggct tcattgacgc
    37861 ttcatttatc atattttcag cacaagcaag cactccgaca atatttacag gcagttgtaa
    37921 acgactagcc gcttcaatga taccaacgac attcgcagcg ccacacatgt caaacttcat
    37981 tgtagccatg ccattcttcg ttttaatact ataaccacca gaatcatatg ttataccttt
    38041 accaactaag gcaattggtg cttcatcttt gtctttgcca ttatatgtga tggttactaa
    38101 tctcggttta tgcttactac ctttacctac tgcttgtaaa agtccgaatc cttcagaaac
    38161 taaagtgtca taatctttaa cctctacttt gacctttgta tttttaaaat gattaacaat
    38221 atcttctgca aatgtttgtg gtgttaatac attcggtggc atattactaa agtctcttgc
    38281 caaattaatg gactggccaa tactgatacc ctcatgaatg aaatctaatt caattaatga
    38341 ttcactaata aggtttaaat tcgtcttaaa cggtgccttc ttacttgatt tataatgatc
    38401 gaattcatat gttgcacgct cactttgaat gccgcatgcc attaatacat ctgataactg
    38461 atcatatttt gaaataaatg aatccataag taaatacgta tcttcaatgt gttctgactt
    38521 tatgtattgg aaaagatgtc cccatatttt caacatatct tgataactac gtgtttttaa
    38581 gtttcctaaa ccaactgtaa ttaaacgata tgtttgatct tgtacatcaa atgcagttgt
    38641 ataaatcttc ccaactttac taccaataat atgttgatgt tttagtcttt caagtgattc
    38701 tgtaatatcg atatgattaa aactaatgcg ctctaactga tttaaatgtt ctggtatacc
    38761 aataatcaat gtatttattt cgttgcttag tgtgttattt aatttaaaat tcataatgta
    38821 cctccttaga tttgatatgt tactcacttc aaattgtaca acaataaagc ccttcagtga
    38881 cactgaagga ctttataaat gaataattta attttatgtg tttagctgta acttaattta
    38941 aagcctagaa tttacctttt ttgaatgcta aaccgatacc accgattttg aataccgcac
    39001 gtgtatcaat cacttttttc atgaatgctg cttttttacc agcgataggt ttaccaaata
    39061 ccatacctac accgtcatgt gaacctaaag aacaaacagt tccacgatca acgtattcga
    39121 attcttcagt tgattcaccg tttaagatgc gtttaatgtt tttagcaaca ctttcacctt
    39181 gttgcattgc aatttgtgct gtagttggta atggacgttc ttctccagct gggataaacg
    39241 ctgaacagtc accaataaca aaaatgttgt cgtaaccatt gattgttaaa tcttgctttg
    39301 taacgatacg tccacgttta acgccttcaa atgattcttc cattaattta ctaccacgta
    39361 caccagctgc ccatactgaa gtacctgcat ttaattgttg tttttcacca tctacttcaa
    39421 ctacgaaacc tttttcgtta caagcaacga ttggtgtagc aattttaaat tcaacaccgc
    39481 ggtcttctaa gtagctaact gcgtggttaa ctaattcttc tgagaacatt ggtaacattt
    39541 taggtgctgc ttcaacacaa gtgattttaa ctttattttg atccacacca tatttgctac
    39601 ataattcagg aattctgtct gttaattcac ctaagaattc aacaccagtg aatccagcac
    39661 caccaactaa gatagataaa tcgttatcat ctttttcttt tgatgctgca tagttagcaa
    39721 atttgtcttc gatatgacgt gataattcac gtgctgtgat aacattttca atttggaaag
    39781 catgatcttt cataccttcg atgccgaatg tttcactaac gaaacctaat gctactacta
    39841 aaatatcaaa gtcataaata ccttgatttg tttctacctt tttagcatca cggtcaattt
    39901 ttgttacttc tgcttgaaca aagttcactt tgtctttctt caagacactt tccacaggat
    39961 ataatacatc ttcatagttt agtgtacctg ctgatgcttc atgtaaccat gttgcttcat
    40021 agtgatattc atttttatta ataagcgtaa tttctgcttc ttctgttgat atcgcttttt
    40081 gcaatttagt tacagtttgt aaacctgcat aaccagcacc aagtacaagt acttttttac
    40141 gatcttgagc catttaattt cacctaagct ttcatatttt tttaaccaaa tgctgataat
    40201 tactagtaac aactggtcat tactactttt accacaatgt atactagttt atcatcattt
    40261 tgttatttaa gtcttttaaa ttatgtaaaa acctgtgatg ttcacaaaaa agacattttt
    40321 aatccaatac taattctata gcttttatgt tatattttca agcaagattc agtcagattg
    40381 t
//
LOCUS       DALMNS010000007        38905 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.007, whole genome shotgun sequence.
ACCESSION   DALMNS010000007 DALMNS010000000
VERSION     DALMNS010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 38905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38905
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.007"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..447
                     /locus_tag="O6Y56_000320"
     CDS             <1..447
                     /locus_tag="O6Y56_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HDB5573616.1"
                     /translation="LAKHLKTFPIRFKQSVENAQKIVSFLIKQDEISEVYYPGLTAAH
                     LEQAKNGGAVIGFRLADESKAQQFVDALTLPLVSVSLGGVETILSHPATMSHAALPEE
                     VRQERGITFGLFRLSVGLEDPDELIADIKYALKEAFNESIPHTIER"
     gene            416..2257
                     /locus_tag="O6Y56_000321"
     CDS             416..2257
                     /locus_tag="O6Y56_000321"
                     /EC_number="1.5.1.20"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional homocysteine
                     S-methyltransferase/methylenetetrahydrofolate reductase"
                     /protein_id="HDB5573617.1"
                     /translation="MSQFLTQLKDNVLVADGAIGTILYSEGLDTCPEAYNLSHPDKVE
                     RIHRSYIEAGADVIQTNTYGANFEKLKRFGLEDKVKAIHQAAVRIAKKAANKDTYILG
                     TVGGFRGIKQEDISLQTILYHTEIQIDTLIEEGVDALLFETYYDLEELTNVISRTRKK
                     YDIPIIAQLTASNTNYLVNGQAINEGLKQLVQCGANIVGLNCHHGPHHMQESFTHIEL
                     PEHAYLSCYPNASLLDIENSEFKYSDNAQYFGQVAQNLIREGVRLIGGCCGTTPEHIK
                     FIKESIQTLKPVNDKKVIPIPKKALFNPSQNKVRQSLTSKVQERPTVIIELDTPKHLD
                     TDRFFENIAKLDKANVDAVTLADNSLATVRISNIAAASLIKQYYNIEPLVHITCRDRN
                     LIGLQSHLLGLSLIGVNEILAITGDPSKVGHLPGATNVYDVNSKGLTELALRFNQGIN
                     TDGDALKKRTHFNIAGAFNPNVRKLDGAVKRLEKKIESGMSYFITQPVYSKEKIIEIY
                     HATKHLNKPFFIGIMPIASYKNALFLHNEVPGIKMSDEILQQFEAVKDDKAKTRELSL
                     KLSKDLIDTVHEYFNGLYIITPFQNVEDSLELAAYSKSITAHKEAIL"
     gene            2254..4482
                     /gene="metE"
                     /locus_tag="O6Y56_000322"
     CDS             2254..4482
                     /gene="metE"
                     /locus_tag="O6Y56_000322"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDB5573618.1"
                     /translation="MTTIKTSNLGFPRLGRKREWKKAIESYWAKKISKEELDQTLTDL
                     HKENLLLQKYYHLDSIPVGDFSLYDHILDTSLLFNIIPERFQGRTIDDDLLFDIARGN
                     KDHVASALIKWFNTNYHYIVPEWDNVEPKVSRNVLLDRFKYAQSLNVNAHPVIVGPIT
                     FVKLSKGGHQTFEEKVKTLLPLYKEVFESLIDAGAEYIQVDEPILVTDDSESYENITR
                     EAYDYFEKAGVAKKLVIQTYFERAHLKFLSSLPVGGLGLDFVHDNGYNLKQIEAGDFD
                     KSKTLYAGIIDGRNVWASDIESKKVLIDKLLAHTNELVIQPSSSLLHVPVSLDDETLD
                     TSVGEGLSFATEKLDELDALRRLFNQNDSVKYDKLKARYERFQNQSFKNLDYDFESVR
                     TSRQSPFAQRIEQQQKRLNLPDLPTTTIGSFPQSQEVRKYRADWKNKRITDEAYETFL
                     KNEIARWIKIQEDIGLDVLVHGEFERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKP
                     PIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQI
                     ALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDE
                     TQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIKDFEDINYDLGIGLGVYDI
                     HSPRIPTKEEITTAINRSLQQIDRSLFWVNPDCGLKTRKEEEVKDALTVLVNAVKAKR
                     QE"
     gene            4525..5277
                     /locus_tag="O6Y56_000323"
     CDS             4525..5277
                     /locus_tag="O6Y56_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HDB5573619.1"
                     /translation="MTHYPLWQQLNTLKQATWVDLTHTFDPEIPRFSEFEKGEVSTLF
                     TVKDHGFYVQRWNIVTQYGTHIDAPIHFVENKRYLEDIDLKELVLPLIVLDFSTEVAN
                     NNDFIVTRAHIEAWEKEHGTIEPGTFVALRTDWSKRWPNIETFENKDSNGQQHAPGWG
                     LDALKYLIEERRVEAVGHETFDTDASVDVVKNGDLVGERYILGQDKYQVELLTNLDQL
                     PTRGAIIYAISPKPKDAPGFPVRAFAIKPSND"
     gene            complement(5360..6541)
                     /locus_tag="O6Y56_000324"
     CDS             complement(5360..6541)
                     /locus_tag="O6Y56_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HDB5573620.1"
                     /translation="MTRVVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLN
                     PSEINEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSI
                     VTGENDIVLAGGMENMSQSPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGIT
                     AENLVEQYGISREEQDTFAVNSQQKAVRAQQNGEFDSEIVPVSIPQRKGESIVVTMDE
                     GVRENVSVEKLSRLRPAFKKDGTVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVL
                     DGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLP
                     PEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDEVETGLTSLCIGGGQAIAAVVSKY
                     K"
     gene            7063..8196
                     /locus_tag="O6Y56_000325"
     CDS             7063..8196
                     /locus_tag="O6Y56_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HDB5573621.1"
                     /translation="MVNALTPKHLAEKRAGFHELFFDLIFVYAIQKIAHVILTTQNGS
                     ISADLFFKYIVMSLFLWLMWSHQTFFTNRFGQVTFKDVSFMMFNMFIMVFLSNSLYPD
                     FEKTFFPFFLCVAIMYLSIGLQYLLHIRTGLDYGDKRTCQAFATVAFVISFLSFLSLV
                     LPQSIHYIPGFLGVFIAATGLIPFQKYLVLSPVNMMHLVERFSLLTIIIFGEVLVGLA
                     SSSFSIDHFSYIYIFQFMILISLFGVYWIITENYINHKLSSIGFRLSYTHLLINIALG
                     VINAAIVFSNNNKLNDLFEINMMYISVLIFYIGLWLITPYFHNELTNAKYISSSLGIL
                     VVSYIISLIFKGHDQVMIISVSVATFCIMLIYFKNQRLRQSDE"
     gene            complement(8583..9212)
                     /locus_tag="O6Y56_000326"
     CDS             complement(8583..9212)
                     /locus_tag="O6Y56_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 transporter permease"
                     /protein_id="HDB5573622.1"
                     /translation="MKGMFLSSFYATRKQTYIYFIVAIIAAGYFAVFNPLMSSAMAGV
                     MLITPITDNIKHEKDSRWMYYVSTLPVKRSDYIKSYFAFYLILFGASLMIGLVVTTIV
                     TQSVMIGIMSGLMSFGIIGAYSIIFPLTFKFGAENSNVIMICASILLLISFVVFFFIY
                     GMVSGASALEFEKISTGGWLVVIVYAVIGIVITSVSYILSIKIFNKQEL"
     gene            complement(9212..10054)
                     /locus_tag="O6Y56_000327"
     CDS             complement(9212..10054)
                     /locus_tag="O6Y56_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5573623.1"
                     /translation="MTTLLNVDRVNKQYKDSEFKLQDASLTISTNETVGLIGKNGSGK
                     STLINILVGNRHKDNGSITFFGEEHAAGDVEYKEHIGVVFDDLRVPNKLTIKDIDKVF
                     QSIYTTWNSQKFFDLIKYFELPLQTKIKTFSRGMRMKIALTIALSHDVKLLILDEATA
                     GMDVSGREEVMELLEDFVAQGGGILISSHISEDIEQLADKLVFMKDGRMILTEQKDIL
                     LAQYGIVTTEDKDVEIPKHLIIASRLSKGKYQILVKDYAEIENAEPLKHIDDATKIIM
                     RGEV"
     gene            complement(10079..10792)
                     /locus_tag="O6Y56_000328"
     CDS             complement(10079..10792)
                     /locus_tag="O6Y56_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3169 family protein"
                     /protein_id="HDB5573624.1"
                     /translation="MKILRYIGYLLLGGLVGGIIGGILGNFDGLGIENLTFATRNNVV
                     VISIVATMIIILIEIIVLMNQRRALKYKRLVDEEVDNEETDQYELLANRHVLNGSILS
                     ILQTVIALLVLLIFVVGQAEANGILFFLIPFFASGIFNTQFTLFNRRFDDRMPKIADK
                     NYTEKRLEILDEGERHIELIALFKTYAINLSILILAIVVIGLYSITTGINQSFSLLLI
                     IAIFIYNAFSYLLKSRRFY"
     gene            complement(10789..10992)
                     /locus_tag="O6Y56_000329"
     CDS             complement(10789..10992)
                     /locus_tag="O6Y56_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDB5573625.1"
                     /translation="MRNRLKELRARDGLNQTQLAKQAGVSRQTISLIERNNFMPSVLT
                     AIKIARIFNEKVETIFIIEEDEA"
     gene            11234..11623
                     /locus_tag="O6Y56_000330"
     CDS             11234..11623
                     /locus_tag="O6Y56_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1398 family protein"
                     /protein_id="HDB5573626.1"
                     /translation="MAFTLSAIQQAHQQFTGVDFPKLFKAFKDMGMTYNIVNIQDGTA
                     TYVHQSEDDIVTSSVKSNHPVAPRSNQSIVQDVLTRHQQGQTDFETFCDEMAEAGIYK
                     WHIDIQAGTCTYIDLKEQAIISELIPQ"
     gene            11722..11946
                     /locus_tag="O6Y56_000331"
     CDS             11722..11946
                     /locus_tag="O6Y56_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HDB5573627.1"
                     /translation="MIIMITNTFILGITGPTSLVVISIIALIIFGPKKLPQFGRAIGS
                     TLKEFKSATEDLDKESHDTPSKESKQQREQ"
     gene            11963..12664
                     /gene="tatC"
                     /locus_tag="O6Y56_000332"
     CDS             11963..12664
                     /gene="tatC"
                     /locus_tag="O6Y56_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001807913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDB5573628.1"
                     /translation="MVHFSELRHRLVKILLSFVITVIVVYVSSFWWMTPFITYITRAH
                     VSLHAFSFTEMIQIYVMIIFFITFCFISPVMFYQLWAFIAPGLHNNERQFIYKYSFFS
                     VLLFCAGVAFAFYVGFPMIIQFALKLSLTLNISPVIGFKAYLIELIRWLFTFGILFQL
                     PILFMGLAKFGLIDTYSLKHYRKYIYFACFVLASIIAPPDITLNILLTLPLILLFEFS
                     MFIVKFTCRDEPPTQ"
     gene            complement(12915..14627)
                     /locus_tag="O6Y56_000333"
     CDS             complement(12915..14627)
                     /locus_tag="O6Y56_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000683714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HDB5573629.1"
                     /translation="MKHYLTKIIAMLITAAMVCNFGLLKSQAAEQQSISDVYSVITDA
                     KSALSNNSISNDNKQKAIEQVVSAVKKLSLEDNSEGNAVKSNVRKLEDAKANDDKKDT
                     LSQLTKSLIAYEEKLASKDAGSKIKLLQQQVDAKDAAMTKAIKDKNKAELESLNNSLN
                     QIWTSNETVIRNYDANQYGQIEVALLQLRIAIHKSPLDTAKVSHAWTTFKSNIDHVDK
                     KSDTSANDQYHVSQLNDELEKAIKAIDNNQLSDADAVLTHFIEIWPYVEGQIQTKDGA
                     LYTKIEDKIPYYQSVLDEHNKAHVKDGLVDLNNQIKEVVGHSYSFVDVMIIFLREGLE
                     VLLIVMTLTTMTRNVKDKKGTASVIGGAIAGLVLSIVLAITFVETLGNSGMLRESMEA
                     GLGIVAVILMFIVGVWMHKRSNAKRWNDMIKNMYANAISNGNLVLLAMIGLISVLREG
                     VEVIIFYMGMIGELATKDFVIGIALAIVILIVFALLFRFIVRLIPIFYIFRVLSIFIF
                     IMGFKMLGVSIQKLQLLGAMPRHVIEGFPTINWLGFYPSYEPLIAQATYIMVVAILIF
                     KFKK"
     gene            complement(14608..15837)
                     /gene="efeB"
                     /locus_tag="O6Y56_000334"
     CDS             complement(14608..15837)
                     /gene="efeB"
                     /locus_tag="O6Y56_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HDB5573630.1"
                     /translation="MTNYEQVNDSTQFSRRTFLKMLGIGGAGVAIGASGVGSMWSFKS
                     MFNTPEDPEKDAYEFYGKVQPGITTPTQKTCNFVALDLKSKDRDAIKAMFKKWTVMAD
                     RMMDGDTVGKASNNPLMPPVDTGESIGLGASKLTITFGISKSLMKKIGLSSKIPDAFK
                     DLPHFPNDQLIDDYSDGDIMIQACSNDSQVSFHAVHNLVRPFRDIVKVRWSQSGFISA
                     KGKETPRNLMAFKDGTINPRKSNQLKDYVFIDDGWAKHGTYCVVRRIQIHIETWDRTA
                     LEEQEATFGRKRHSGAPLTGGKEFDEIDLKAKDSHGEYIIDKDAHTRLAKEANTSILR
                     RAFNYVDGTDDRTGNFETGLLFIAFQKATQQFIDIQNNLGSNDKLNEYITHRGSASFL
                     VLPGVSKGGYLGETLFD"
     gene            complement(15834..16688)
                     /locus_tag="O6Y56_000335"
     CDS             complement(15834..16688)
                     /locus_tag="O6Y56_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573631.1"
                     /translation="MKKLTTLLLASTLLIAACGNDDSKKDDSKTSKKDDGVKAELKQA
                     TKAYDKYTDEQLNEFLKGTEKFVKAIENNDMAQAKALYPKVRMYYERSEPVAEAFGDL
                     DPKIDARLADMKEEKKEKEWSGYHKIEKALYEDKKIDDVTKKDAQQLLKDAKELHAKA
                     DTLDITPKLMLQGSVDLLNEVATSKITGEEEIYSHTDLYDFKANVEGAQKIYDLFKPI
                     LEKKDKKLSDDIQMNFDKVNQLLDKYKDNNGGYESFEKVSKKDRKAFADAVNALGEPL
                     SKMAVITE"
     gene            complement(16953..17498)
                     /locus_tag="O6Y56_000336"
     CDS             complement(16953..17498)
                     /locus_tag="O6Y56_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000467642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5573632.1"
                     /translation="MFGMKVNEQIRLKILEAHDTEALFNLVNRSRNSLREWLPWVDAT
                     EQPSDTRAFIKRGLLQFADGNGFQCGIWYEGTLVGVIGLHEINHMHRKTSLGYYLDKQ
                     FEGHGIMTQAVEALIKYCFDEIDLNRIEISAAVNNEKSQAIPERLGFTREGMLRDNEL
                     LNGIYSSSYIYSLLKSEYNEG"
     gene            17803..18798
                     /locus_tag="O6Y56_000337"
     CDS             17803..18798
                     /locus_tag="O6Y56_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HDB5573633.1"
                     /translation="MASLKNKHFMIGLSLTFIVALFSFLAAKLPILDKVGALTIAILI
                     AILYRHFRGYPEQYSSGITFSSKYLLRFAIILYGLKLNIFDIIGQGSRLLAIDVGVVI
                     FSIVMMLFVNKLLHGDKNIALLLGVGTGVCGAAAIAAVAPIFKSREKDTAISIGIIAL
                     IGTIFSLIYTAIYAIFSMTTNVYGAWSGVSLHEIAHVVLAGGFGGSDALKIALLGKLG
                     RVFLLIPLTIVLILIMRFRSSESSSKGRISIPYFLIGFVIMALVNTYVTIPSVLLNIL
                     NTVSTICLLMAMVALGLNVAFKDLKNRALKPLMTIIITSICLSSLAFIVVHWLYN"
     gene            complement(18858..19424)
                     /locus_tag="O6Y56_000338"
     CDS             complement(18858..19424)
                     /locus_tag="O6Y56_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDB5573634.1"
                     /translation="MNIVLLSGSTVGSKTRIAMDDLKNELEVINEGHQIELMDLRELE
                     LEFSVGKNYLDTTGDVYKLTTSLMQADVIFIGFPIFQASIPGALKNVFDLLPVNAFRD
                     KVIGLVATAGSSKHYLIPEMHLKPILSYMKAHTMQTYVFIEERDFSNQQIVNDDVVFR
                     LKALAQSTMRTAKVQQQVLEEENNQYDF"
     gene            complement(19438..20499)
                     /locus_tag="O6Y56_000339"
     CDS             complement(19438..20499)
                     /locus_tag="O6Y56_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDB5573635.1"
                     /translation="MAKLEMNKNTPLEFGLYSLGDHLLNPFKGEKVSYEQRINEIIEA
                     SKLADEAGIDVFAVGESHQEHFTTQAHTVVLGAIAQATKHIKVSSSSTIISATDPVRV
                     FEDFATLDLISHGRAEIVAGRASRTGIFDLFGYDLKDYDELFEEKLGLLLELNKTERI
                     TWSGKYRPELRNMKIFPRPIDNTLPIWRAVGGPPASAIKAGKQGVPMMITTLGGPAMN
                     FKGSIDAYRQAATEAGFDASPKSLAVSTASLFYTAETTQDAMREFYPHLNTGMSFIRG
                     VGYPKQQFANSPDYREALMVGSPQQIIEKILYQHELYGHQRFMAQIDFGGVPFENVMK
                     NIELIGNDIIPAIKKHLSK"
     gene            complement(20513..21439)
                     /locus_tag="O6Y56_000340"
     CDS             complement(20513..21439)
                     /locus_tag="O6Y56_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDB5573636.1"
                     /translation="MNIVGHHHISMYTKDAKRNKDFYTNVLGLRLVEKSVNQDNPSMY
                     HLFYGDEVGTAGTILSFFEIPNAGHKQPGTETIYRFSLLVPNQAALHYFEKRLENNGI
                     KSEHLYYLGQEGVVFKDEDDLEIILLVNDSFEVPHQWQHNAYSEIPQAYQILGIGPVE
                     LRVRNAARTVEFLENVLGYRKRDNKAFDVLTLAPQGLYSDFVVIEQQGQRERPGRGYI
                     HHIAVNTPQMSDLDAIYKKLQQQPQSNSGIIDRYFFKSLYYRHNSIMYEFATEAPGFT
                     IDTPVEQLGSQLNLPDFLEAEREQIESKLHEI"
     gene            21751..23109
                     /gene="glpT"
                     /locus_tag="O6Y56_000341"
     CDS             21751..23109
                     /gene="glpT"
                     /locus_tag="O6Y56_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HDB5573637.1"
                     /translation="MNFLKPAKHIKPLPENQIDDTYKRLRLQVFLGIFIGYAGYYLLR
                     KNFSLAMPALQEQGFTKAELGFALSAVSIAYGFSKFFMGTVSDRSNARIFLVLGLVLT
                     AIVNLLMGFVPFFTSGIGIMFVLLFLNGWFQGMGWPPSGRVLVHWFSVSERGSKTALW
                     NVAHNVGGGIMAPIAAWGITTTAFINFGYLKGFEGVFIYPALLALIIAAISYVLIRDT
                     PQSQGLPPIEIYKNDFATSDKKTLETELTTKEILFKYVLNNKWVWAIAFANIFVYFVR
                     YGVLDWAPVYLSEEKHFDLKASGWAYFLYEWAGIPGTLLCGYISDKLFKGRRGPAGFF
                     FMLGVTVFVLIYWLNPPGNAWLDNVSLIAIGFLIYGPVMLIGLQALDYVPKKAAGTAA
                     GLTGLFGYLFGAVMANIVLGAVVDKFGWDVGFILLTAISVFAMLSFILTWNKVGQETV
                     HH"
     gene            complement(23193..23633)
                     /locus_tag="O6Y56_000342"
     CDS             complement(23193..23633)
                     /locus_tag="O6Y56_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MepB family protein"
                     /protein_id="HDB5573638.1"
                     /translation="MYKSKILLKYIFSEESEVKDLTEEKYNQDYEALTFSFKEETYQS
                     RLAKKTPTKAGYFVTCWTKDENNCNQPYSKEAFADYLMIIVIDEELSGYFLFPRELLV
                     EKGILTTFEHKGKMAFRVYPKWCNQLNKRAEQTQNWQCKYFFEY"
     gene            complement(23736..25091)
                     /gene="mepA"
                     /locus_tag="O6Y56_000343"
     CDS             complement(23736..25091)
                     /gene="mepA"
                     /locus_tag="O6Y56_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498905.1"
                     /note="MepA (multidrug export protein A), as described
                     originally in Staphylococcus aureus, is a MATE transporter
                     shown to be over-expressed after culturing in the presence
                     of tigecycline, owing to mutation of its repressor MepR,
                     and then to be one of several factors contributing to
                     elevated tigecycline resistance; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter MepA"
                     /protein_id="HDB5573639.1"
                     /translation="MKDEQLYYFEKSPVFKAMMHFSLPMMIGTLLSVIYGILNIYFIG
                     FLEDSHMISAISLTLPVFAILMGLGNLFGVGAGTYISRLLGAKDYSKSKFVSSFSIYG
                     GIALGLIVILVALPFSDQIAAILGARGETLALTSNYLKVMFLSAPFVILFFILEQFAR
                     AIGAPMISMIGMLASVGLNIILDPILIFGFDLNVVGAALGTAISNVAAALFFIIYFMK
                     NSDVVSVNIKLAKPNKEMLSEIFKIGIPAFLMSILMGFTGLVLNLFLAHYGNFAIASY
                     GISFRLVQFPELIIMGLCEGVVPLIAYNFMSNKGRMKDVIKAVIMSIGVIFVVCMIAV
                     FTIGHHMVGLFTTDQAIVEMATFILKVTMTSLLLNGIGFLFTGMLQATGQGRGATIMA
                     ILQGAIIIPVLFIMNALFGLTGVIWSLLIAESLCALAAMLIVYLLRDRLTVDTSELIE
                     G"
     gene            complement(25197..25616)
                     /gene="mepR"
                     /locus_tag="O6Y56_000344"
     CDS             complement(25197..25616)
                     /gene="mepR"
                     /locus_tag="O6Y56_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor MepR"
                     /protein_id="HDB5573640.1"
                     /translation="MEFTYSYLFRMISHEMKQKADQKLEQFDITNEQGHTLGYLYAHQ
                     QDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYIDAQDTRRKNIGLTTSGIKLVE
                     AFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQ"
     gene            25828..27783
                     /locus_tag="O6Y56_000345"
     CDS             25828..27783
                     /locus_tag="O6Y56_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000954286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HDB5573641.1"
                     /translation="MLSYRQIEILYLLIHEQTFIPINTIAKQLGVSPRTIQYDIAYIE
                     QYAETYHYQVSRNKAAGIKVTTANTTILNELEHNLTNQIHFSKDERLTHIALKLFETT
                     DPVSTKQLAQDVNVSRRTIADDIKMIQAQLDQYHLKLNYVHNKGFNIIGEEDHYRKAY
                     AHFIHQYMKQAAPFIEADIFNSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIA
                     IQRLNENFSFDIPINEIDKWRHTNQYAIASKMIENLERSCNITFPESEIIFITLHLLG
                     SKMTEHTASSITFEYHDLSQNIHELITCVSQELGIDMSKDNKLHTSLITHIKPAIHRI
                     KFDMLQPNPLRQEVMRRYPQIIEAVSKHISPIEQDAAIRFNEDELTYITIHFASSIER
                     VATHKQSMIKVVLLCGSGIGTSQLLKSKLNHLYPEFHIWDAYSIYQLEESRLLQDNID
                     YVISTVPCEISAVPVIHVDPFINQQSRQKLNQIINDSREQRVMKMATDGKSLADLLPE
                     HRIIINKQPLSIESAITVAVQPLINDGIVNSNYTAAILKQLEQFGSYMVISPHIALIH
                     AGTDYVQNGVGFALTYFTEGIIFGSKANDPVHLVITLATDHPNAHLKALGQLSECLSN
                     DLYRQDFLDGNIFKIKQHIALTMTKEV"
     gene            27788..28231
                     /locus_tag="O6Y56_000346"
     CDS             27788..28231
                     /locus_tag="O6Y56_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDB5573642.1"
                     /translation="MSLDILSTTRIIVKEQVNDWTEAITIASQPLLQEQIIEQGYVQA
                     MIDSVNELGPYIVIAPEIAIAHARPNNDVHQVGLSLLKLNQHVAFCDEDHYASLIFVL
                     SAIDNHSHLSVLQNLATVLGDNQTVQQLLTATNAQDIKNILKEHD"
     gene            28233..28517
                     /locus_tag="O6Y56_000347"
     CDS             28233..28517
                     /locus_tag="O6Y56_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDB5573643.1"
                     /translation="MKILVVCGHGLGSSFMVEMNAQEALRQLNAPSDIEVEHSDIMTA
                     SPEMADLFICGRDLAENAGRLGDVLVLDNILDKAELQQKLAEKLQQLNMI"
     gene            28532..29878
                     /locus_tag="O6Y56_000348"
     CDS             28532..29878
                     /locus_tag="O6Y56_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HDB5573644.1"
                     /translation="MQAILNFIVDILSQPAILVALIAFIGLIVQKKPAATITSGTIKT
                     ILGFLILSAGADVVVRSLEPFGKIFQHAFGVQGIVPNNEAIVSLALKDFGTTAALIMV
                     CGMIVNILIARFTNLKYIFLTGHHTFYMAAFLAIILTVSHIKGWLTIVIGALVLGLIM
                     AVLPSLLQPTMRKITGNDQVALGHFGSISYFAAGAVGQLFKGKSKSTEEIKFPKGLSF
                     LRESTISISITMALLYFIACLFAGVSYVHESISNGQNFIVFSLIQGVTFAAGVFIILT
                     GVRLILAEIVPAFKGISEKLVPNSKPALDCPIVFPYAQNAVLIGFFVSFITGVIGMFI
                     LFLFGGVVILPGVVAHFFLGATAAVFGNARGGIKGAVAGAALNGILITFLPLLFLPFL
                     GELGGAATTFSDTDFLAVGIVFGNAVKYMGLFGAILFIIIVGATAILLKGRQKPQQ"
     gene            complement(30022..31044)
                     /locus_tag="O6Y56_000349"
     CDS             complement(30022..31044)
                     /locus_tag="O6Y56_000349"
                     /EC_number="6.3.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase"
                     /protein_id="HDB5573645.1"
                     /translation="MYLIEPIRNGEYITDGAIALAMQVYVNQNIFLDEDILFPYYCDP
                     KVEIGRFQNTAIEVNQDYIDKHSIQVVRRDTGGGAVYVDKGAVNMCCILEQDTSIYGD
                     FQRFYQPAIKALHTLGATDVIQSGRNDLTLNGKKVSGAAMTLMNNRIYGGYSLLLDVN
                     YEAMDKVLKPNRKKIASKGIKSVRARVGHLREALDEKYRDITIEEFKNLMVTQILGID
                     DIKEAKRYELSDADWESIEELASKKYKNWDWNYGKSPKYEYNRSERLSSGTVDITISV
                     EQNRIADCRIFGDFFGQGDIKDVEQALQGTKMTREDLTHQLKQLDIVYYFGNVTVESL
                     VEMILS"
     gene            complement(31022..31966)
                     /locus_tag="O6Y56_000350"
     CDS             complement(31022..31966)
                     /locus_tag="O6Y56_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HDB5573646.1"
                     /translation="MQSSKWNAMSLLIDDKTKQAEVLRTAIDEADAIVIGIGAGMSAS
                     DGFTYVGERFTENFPDFIEKYRFFDMLQASLHPYGSWQEYWAFESRFITLNYLDQPVG
                     QSYLALKSLVEGKQYHIITTNADNAFDAAEYDMTHVFHIQGEYILQQCSQHCHAQTYR
                     NDDLIRKMVVAQQDMLIPWEMIPRCPKCDAPMEVNKRKAEVGMVEDAEFHAQLQRYNA
                     FLEQHQDDKVLYLEIGIGYTTPQFVKHPFQRMTRKNENALYMTMNKKAYRIPSSIQER
                     TIHLTDDISTLITAALRNDSTTKNNNIGETEDVLNRTD"
     gene            complement(31956..32756)
                     /locus_tag="O6Y56_000351"
     CDS             complement(31956..32756)
                     /locus_tag="O6Y56_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-ADP-ribose hydrolase"
                     /protein_id="HDB5573647.1"
                     /translation="METLKSNKARLEYLINDMRRERNDNDVLVMPSSFEDLWELYRGL
                     ANVRPALPVSDEYLAVQDALLNDLNRQHVTDLKDLKPIKGDNIFVWQGDITTLKIDAI
                     VNAANSRFLGCMQANHDCIDNIIHTKAGVQVRLDCAEIIRQQGRNEAVGKAKITRGYN
                     LPAKYIIHTVGPQIRRLPVSKMNQDLLAKCYLSCLKLADQHSLNHVAFCCISTGVFAF
                     PQDEAAEIAIRTVESYLKETNSTLKVVFNVFTDKDLQLYKEAFNRDAE"
     gene            complement(32757..33089)
                     /locus_tag="O6Y56_000352"
     CDS             complement(32757..33089)
                     /locus_tag="O6Y56_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498895.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein H"
                     /protein_id="HDB5573648.1"
                     /translation="MKKLANYLWVEKVGDLYVFSMTPELQDDIGTVGYVEFVSPDEVK
                     VDDEIVSIEASKTVIDVQTPLSGTIIERNTKAEEEPTILNSEKPEENWLFKLDDVDKE
                     AFLALPEA"
     gene            complement(33123..34124)
                     /locus_tag="O6Y56_000353"
     CDS             complement(33123..34124)
                     /locus_tag="O6Y56_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDB5573649.1"
                     /translation="MVKLSVLDYALIDEGKDAQKALQDSVTLAKLADRLGFKRIWFTE
                     HHNVPAFACSSPELLMMHTLAQTNHIRVGSGGVMLPHYRPYKIAEYFRMMTALYPNRI
                     DLGIGNNPGTTMVKQALDGINPTYDSYDESISLLRDYLTIKDKPSAHTLGVQPHIDHF
                     PEMWLLSSSATSAKIAAELGIGLSVGTFLLPDINAIHAAKDNIDIYKKYFQASTIKMG
                     AKVMASVFVIVADNEAEVAALQHALDVWLLGKLQFAEFEHFPSVDTAQKYKLNDRDKE
                     MIQAHQARIIAGTQEQVKAQLDDFIATFEVDEVLVAPLIPGIEQRCKTLKLLAEIYL"
     gene            complement(34238..34324)
                     /locus_tag="O6Y56_000354"
     CDS             complement(34238..34324)
                     /locus_tag="O6Y56_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573650.1"
                     /translation="MESIFKIKLMNGICRSENMKKKNKSEKI"
     gene            34420..35619
                     /locus_tag="O6Y56_000355"
     CDS             34420..35619
                     /locus_tag="O6Y56_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent flavin oxidoreductase"
                     /protein_id="HDB5573651.1"
                     /translation="MYRYKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADL
                     AYAARRSNSAGMQVTGAAYIEPYGQLFEYGFNIDHDACIPGLTNMASTMKQHSSLAII
                     QLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHDVIAMSQEKINSIIQQYRDATLRAI
                     KAGFDGVEISIAQRLLIQTFFSTFSNKRTDHYGADSLKNRAKLCLEVMRAVQEVIDKE
                     APDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTS
                     RTPGEHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQHADMVGMSSPFVTEPD
                     FVHKLAEQRPHDINLEFSMADLEDLAIPHAAFKDIVKMMDYGESLKKHTRDALRQLEQ
                     NYHDSSS"
     gene            35692..36519
                     /locus_tag="O6Y56_000356"
     CDS             35692..36519
                     /locus_tag="O6Y56_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000136024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDB5573652.1"
                     /translation="MTEIKDKVITKDAFALPYTIIKAKNQPTKGAIVYIHGGGLMFGK
                     ANDLSPQYIDILTEHYDLIQLSYRLLPEVSLDCIIEDVYASFDAIQSQYSNCPIFTFG
                     RSSGAYLSLLIARDRDIDGVIDFYGYSCINTEPFKMANSYYAKIAQSVNETMIAQLTS
                     PTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNISPNELKTLPPVFVAHCN
                     GDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDRRPNDEAIAIYRKVVDFLNAITMA"
     gene            complement(36761..38836)
                     /gene="lip2"
                     /locus_tag="O6Y56_000357"
     CDS             complement(36761..38836)
                     /gene="lip2"
                     /locus_tag="O6Y56_000357"
                     /EC_number="3.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK domain-containing triacylglycerol lipase
                     Lip2/Geh"
                     /protein_id="HDB5573653.1"
                     /translation="MLRGQEERKYSIRKYSIGVVSVLAATMFIVSSHEAQASEKTLTS
                     NAAAQKETLNQPGEQGNAITSHQMQSGKQLDDMHKENGKSGTVTEGKDTLQSSKHQST
                     QNSKTSRTQNDNQVKQDSERQGSKQSHQNNATNKTERQNDQVQNTHHAERNGSQSTTS
                     QSNDVDKSQPSIPAQKVIPNHDKAAPTSTTPPSNDKTAPKSTKAQDATTDKHPNQQDT
                     HQPAHQIIDAKQDDTVRQSEQKPQVGDLSKHIDGQNSPEKPTDKNTDNKQLIKDALQA
                     PKTRSTTNAAADAKKIRPLKANQVQPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNK
                     FKVIEELRKQGYNVHQASVSAFGSNYDRAVELYYYIKGGRVDYGAAHAAKYGHERYGK
                     TYKGIMPNWEPGKKVHLVGHSMGGQTIRLMEEFLRNGNKEEIAYHKAHGGEISPLFTG
                     GHNNMVASITTLATPHNGSQAADKFGNTEAVRKIMFALNRFMGNKYSNIDLGLTQWGF
                     KQLPNESYIDYIKRVSKSKIWTSDDNAAYDLTLDGSAKLNNMTSMNPNITYTTYTGVS
                     SHTGPLGYENPDLGTFFLMDTTSRIIGHDAREEWRKNDGVVPVISSLHPSNQPFVNVT
                     NDEPATRRGIWQVKPIIQGWDHVDFIGVDFLDFKRKGAELANFYTGIINDLLRVEATE
                     GKGTQLKAS"
BASE COUNT        12275 a         7552 c         5989 g        13089 t
ORIGIN      
        1 cttgctaaac atttaaaaac atttccaatc agatttaaac aatctgtcga aaacgctcaa
       61 aaaatcgtgt catttttaat aaagcaagat gaaatttcag aagtttatta tccgggactc
      121 actgctgctc atttagaaca agctaaaaat ggcggtgccg ttattggctt tcgtttagct
      181 gatgagtcta aagcacaaca atttgtcgat gcactgacat taccactcgt ttcagtgagt
      241 ctgggcggtg ttgaaacgat cctttcacat ccagcaacaa tgtctcacgc tgcactacct
      301 gaagaagtga gacaagaacg tggtatcact ttcggtctat tccgattaag cgttggtctc
      361 gaagatcctg atgaactcat tgcagacatc aaatacgcat taaaggaggc attcaatgag
      421 tcaattcctc acacaattga aagataatgt tttagtagct gatggcgcta ttggaacgat
      481 tttatactct gaagggttag acacctgtcc agaagcatat aatcttagcc atccagataa
      541 agttgaacgc atccatcgtt catatattga agccggtgct gatgtcattc aaaccaatac
      601 ttatggtgca aattttgaaa agttaaaacg attcggtctt gaagataaag ttaaagctat
      661 acatcaagcc gccgttcgca tcgcaaaaaa agcagcaaat aaagatacgt atatattagg
      721 cacagttggt gggtttagag gtatcaaaca agaggatatc agcttacaaa ctattcttta
      781 tcatactgaa attcaaatag acaccttaat tgaagaaggc gttgacgcgc tacttttcga
      841 aacgtattac gacctagaag agttaacaaa tgtcatttca cgaacgagaa agaaatacga
      901 cattccaatc attgctcaat taaccgcttc aaacacaaat tacttagtta atggtcaggc
      961 aatcaatgaa ggattaaaac aactcgttca atgtggtgca aacatcgtgg gactcaattg
     1021 tcatcatggc ccgcaccata tgcaagagtc tttcacacat attgaattac cagagcacgc
     1081 atacttatct tgttatccaa atgccagctt attagatatt gaaaatagtg aatttaagta
     1141 tagtgacaat gcacaatatt tcggccaagt tgctcaaaat ttaattcgcg aaggtgttcg
     1201 tttaattggt ggttgctgtg gtacaacgcc agagcacatc aaatttatta aagaatctat
     1261 tcagacactt aaacctgtta atgacaaaaa agtgattccg ataccaaaga aagcactttt
     1321 caatccatct caaaataaag ttagacaatc attaacatct aaggttcaag aacgtccaac
     1381 cgttattatc gaattggata caccgaaaca tttagacacg gatagatttt ttgaaaatat
     1441 cgctaaactt gataaagcta atgtagatgc ggtaacactc gcagataatt cattggcaac
     1501 tgtcagaatt agcaacattg ctgctgcaag cttaattaaa caatattaca atattgaacc
     1561 actcgtacat attacatgtc gagaccgaaa cttaatcggc ttgcagtccc atttacttgg
     1621 attatcgctc attggcgtta acgaaatatt agccataact ggtgatcctt caaaagttgg
     1681 tcacttacca ggtgcaacca atgtctatga tgttaattct aaaggattaa ctgaactcgc
     1741 tctaagattt aatcaaggta ttaacactga cggtgatgcg ctgaagaaac gtacacactt
     1801 caacatcgct ggcgccttta accctaatgt tcgtaaatta gatggtgccg taaaacgact
     1861 agagaaaaag atagaaagcg gaatgtctta ttttataaca caacccgtgt acagcaaaga
     1921 gaaaatcatt gaaatttacc atgccactaa gcacttgaac aaaccatttt tcataggcat
     1981 tatgcctatc gcaagttaca aaaacgcact ctttttgcat aatgaagtgc caggaatcaa
     2041 gatgtcagat gaaattttac aacaatttga agcagttaaa gatgataaag ccaaaacacg
     2101 cgaactaagt cttaagcttt caaaggattt aatcgatact gttcatgaat attttaatgg
     2161 tttatacatt atcacaccgt ttcaaaatgt cgaagattca ttagaacttg cagcatactc
     2221 aaaatctatt actgctcaca aggaggcaat attatgacaa caattaaaac atcaaactta
     2281 ggattcccaa gattaggtag aaaaagagaa tggaaaaaag ccatcgaaag ttattgggca
     2341 aagaagattt ctaaagaaga attagatcaa acattaactg atctacataa agaaaattta
     2401 ttattacaaa agtactatca cttagatagc atcccagttg gtgatttctc tttatatgac
     2461 catattttag atacgtcatt attattcaac atcatccctg aacgtttcca aggtagaact
     2521 atcgatgatg acttattatt tgatattgct cgcggtaata aagaccatgt tgcaagtgca
     2581 cttataaaat ggtttaacac taactatcat tacatcgtac ctgaatggga caatgttgag
     2641 cctaaggtga gtcgcaatgt attattagat cgctttaaat atgcccaatc tttaaacgtt
     2701 aacgctcacc ctgtcattgt tggtccgata acttttgtta aattatcaaa aggcggtcac
     2761 caaacttttg aagaaaaagt taaaacgtta ttaccacttt ataaagaagt gtttgaatca
     2821 ttaattgatg caggtgctga gtacattcaa gttgatgagc caatcttagt tacagacgac
     2881 agtgaaagct atgaaaatat tacacgtgaa gcttatgact atttcgaaaa agctggtgtt
     2941 gctaaaaaat tagtcattca aacatacttc gaacgtgcac atcttaaatt cttaagttct
     3001 ttacctgttg gtggtttagg tttagacttt gtccatgata atggctataa ccttaaacaa
     3061 attgaagcag gagattttga taaatcaaaa acattatacg ctggaattat tgatggtcgt
     3121 aatgtatggg caagtgacat tgaatctaaa aaagtcttaa tcgataaatt gttagcacac
     3181 acgaatgagc ttgtcattca accatcatct tcattattac atgttccagt atctttagat
     3241 gatgaaacat tagatacaag tgttggcgaa ggcttaagct ttgcaactga aaaattagac
     3301 gaattagatg cattgcgtcg cctatttaat caaaacgata gtgttaaata tgataaatta
     3361 aaagcacgtt atgagcgttt ccaaaatcaa tcattcaaaa acttagatta tgatttcgaa
     3421 agcgtgcgta cttcaagaca atcaccattc gcgcaacgta ttgaacaaca acaaaaacgt
     3481 ttgaacttac cggatttacc aacaacaact attggatcat tcccacaaag ccaagaagtt
     3541 cgaaaatacc gtgcagattg gaaaaacaaa cgcattacag acgaagcata tgaaacattc
     3601 ttaaaaaatg aaattgctcg atggattaaa attcaagaag acatcggctt agatgtatta
     3661 gttcacggtg aatttgaacg taatgacatg gttgaattct tcggagaaaa attacaaggt
     3721 ttcttagtaa ctaaattcgg ttgggtgcaa tcatatggtt cacgtgccgt aaaaccacca
     3781 atcatttatg gtgatgtaaa atggacagca cctttaactg ttgatgaaac agtttatgca
     3841 caaagcttaa cagataaacc agttaaaggt atgttaactg gacctgtaac aattctaaac
     3901 tggtcatttg aacgtgttga tttaccacgt aaagtcgttc aagatcaaat tgctttagca
     3961 atcaacgaag aagtattagc acttgaagct gcaggaatca aagttatcca agttgacgaa
     4021 cctgcattac gtgaaggctt accattacgc tctgaatatc acgaacaata tcttaaagat
     4081 gctgttttat catttaaact tgcaacgtct tcagttcgtg atgaaactca aatccataca
     4141 catatgtgtt attctcaatt cggtcaaatc attcatgcta ttcatgactt agatgctgat
     4201 gttatttcaa ttgaaacatc tcgtagccat ggtgatttaa ttaaagactt tgaagatatt
     4261 aattatgatt taggtattgg tctaggtgta tatgatattc atagtccacg tattccaaca
     4321 aaagaagaaa ttactacagc aatcaatcgt tcactacaac aaatcgatcg ctcattattc
     4381 tgggtaaacc ctgactgtgg tttgaaaacg cgaaaagaag aagaagttaa agatgcattg
     4441 actgtacttg tgaatgctgt taaagctaaa cgccaagaat aatcgcagca tttatcatat
     4501 aataaactaa aaacgggtga ttttatgaca cactatcctt tatggcaaca attaaatact
     4561 ttaaaacaag caacttgggt tgatttaacg catacatttg atccagaaat accacgtttt
     4621 agtgagtttg aaaaaggtga agtttcaact ttattcacgg ttaaagatca tggtttctat
     4681 gtgcaacgtt ggaatattgt aacgcaatat ggtactcaca ttgatgcacc aatccacttt
     4741 gtcgagaaca aacgttattt agaagacatt gatttaaaag aattggtatt gccgttaatt
     4801 gtattagact tttcaacaga agtagcgaac aacaatgatt tcatcgtaac acgtgcgcat
     4861 atagaagcat gggaaaaaga gcatgggact attgaacctg gcacttttgt tgcacttcgt
     4921 accgattggt caaaacgttg gcctaatatt gaaacgtttg aaaacaaaga ttcgaacgga
     4981 caacaacatg caccgggttg gggattagat gctttgaagt acttaattga agaacgccgt
     5041 gttgaagctg ttggtcatga aacattcgat accgatgcat ctgtggacgt tgtaaaaaat
     5101 ggtgatttag ttggcgaacg ttatattctt ggtcaggata aataccaagt cgagttatta
     5161 actaatttag atcaattacc aactcgtggc gccatcattt acgctatcag ccctaaacca
     5221 aaagatgcac ctgggttccc tgttagagca tttgcaatta aaccatcaaa tgactaatat
     5281 tacccaataa atccataaac aaataaaaac aggttatgcc aacatgtaat taatactgtt
     5341 gtgataacct gttttcttat tatttatact ttgatacaac tgcagcgata gcttgaccgc
     5401 caccaataca caatgatgtt aaaccagttt cgacttcatc attcagttga tgcaataatg
     5461 tcactaaaac tctagcacca gatgcaccaa tagggtgtcc taatgcaata gcgccacctt
     5521 taacattcac cttttcagga ggtaatttta attcgcgatc tacagctaat gattgtgctg
     5581 caaatgcttc atttaattca aatacatcaa tatcgcttaa ttctttttta ctacgtttca
     5641 aagccttttc aacagcgcca actggtgcaa tacccataat agaaggatct acaccatgac
     5701 ttccaaagcc atcaagcact gccaatggtt cgatatttaa ttctttagct ttgtcttctg
     5761 acatgactaa catcatcgca gcaccatcat tgattcctga tgcattacct gctgtaactg
     5821 taccgtcttt tttgaaagct ggtcttaagc gacttaattt ttcaactgat acattttcac
     5881 gtacaccttc atccatagtg acaacgattg attcaccttt acgttgagga atcgatactg
     5941 gaactatttc actatcaaat tcaccatttt gctgtgcacg tactgctttt tgttgtgagt
     6001 ttacagcaaa tgtatcttgt tcttctcttg aaataccata ttgttctact aaattttcag
     6061 cagtaatacc catatgatat tgattaaata catctgttaa accatcatat accatgctat
     6121 caaccattga ttgatgtccc attttaaaac caaagcgact gttgttgaca agcattggtg
     6181 attgagacat attctccata ccgccagcta gcacgatgtc attttcacca gtcacaatag
     6241 attgatatgc taattgaatc gactttaacc cagaaccaca tactttattc actgtaaatg
     6301 caggtactgt ttctggcaag ccacctttca tagcagcaat tcgtgctgga ttttgtcctt
     6361 gtcctgcttg tagtacgtta ccgatgatga cttcattaat ctcacttgga ttcaaacccg
     6421 tctctttaat aatatgttct attaaagtcg cacctaaatc ataggctggc acgtctttaa
     6481 acgcacctcc aaaaacgcca ataggtgtcc tgtatgctgc tgctaatacg actctcgtca
     6541 tgtcatattc atctccttat gatatataca attttattac taatacgtct aatgaaccaa
     6601 tacgccacta acatccaatt tatgaaacca attgctacgt atgttacatt ttcattcttg
     6661 ttatgcattt aacaagacat attatacaat gtagtaattt gattgggcaa ttagaaacgc
     6721 aaccgttttc accctaacac ttcacacttt aatttttgct ctatcatcct catctatagt
     6781 acaaaattat taattaattt accacaaata ttcattataa ttaagtgcaa cgctatcatc
     6841 attttacagt caattatgga actactttgt tgctgttgat ttcataatgt ccttcacatt
     6901 tatcggtaca tcacctatat tgttagcaat tttgaagcta ccttcatatc aactatctca
     6961 aacccttcgt cgatactaaa atataaaaag cctcttttca ctagaataga tgcatagtat
     7021 acttaaaaaa ttaattatac atccaaaagg agttaaaatt ttatggttaa tgcattaaca
     7081 ccaaaacatt tagctgaaaa gcgtgcagga ttccatgagt tgttctttga tttaattttc
     7141 gtctatgcca ttcaaaaaat tgcacatgtg attttaacaa cacaaaatgg ttccatttca
     7201 gctgatttat ttttcaaata catcgtcatg agtttgttct tatggttaat gtggtctcat
     7261 caaacatttt ttacaaatcg atttggtcaa gttacattca aagacgtctc gtttatgatg
     7321 tttaatatgt ttatcatggt cttcctatct aacagcctat atccggactt tgaaaagaca
     7381 ttcttcccat tcttcttatg cgtggcaatt atgtatttaa gtatcggatt acagtattta
     7441 ttacatatac gtacaggatt agattatggc gataagcgta catgtcaagc ttttgcgacc
     7501 gtagcctttg tgatttcatt tttatcattt ctatcattag tactaccaca aagtatccat
     7561 tacatccctg gatttttagg cgtattcatt gcagcgacag gacttattcc atttcagaaa
     7621 tatcttgtat tatcacctgt taatatgatg catttagtag aacgtttttc gttactaaca
     7681 attattatct ttggcgaggt actggttggt ttagcttcgt catcatttag cattgatcat
     7741 tttagttaca tttatatatt ccaatttatg attttaatta gtcttttcgg tgtttattgg
     7801 atcattactg aaaattacat caatcataaa ttatcatcta tcggttttcg tttatcgtat
     7861 acgcatctat taatcaatat cgctttaggt gtgattaatg ccgcaattgt ttttagtaat
     7921 aacaataaac taaatgactt gtttgaaatt aatatgatgt atatcagtgt tttaatattc
     7981 tatattggat tatggttaat cacgccttat ttccataatg aactgacaaa cgcaaaatat
     8041 atttcttctt cactaggcat acttgtagta tcatatatca tcagccttat ctttaaaggg
     8101 catgaccaag taatgattat ctcggtatcc gttgcgactt tctgcatcat gctcatctat
     8161 tttaaaaatc aacgtctacg tcaaagtgat gaatagataa ccttgatctc gatcaatgta
     8221 ttggaactgc atccaaaaat attgtgcttc acagtatact tttgagacaa tcatcagtta
     8281 tgatacatga tcgagttttt atatttccaa ggaaatcatt ggcatatact atcatcaatt
     8341 gatacacgca aataaatttc agcaacacac tcaataatat atacacgtta atcctcacta
     8401 taaaaggatg caattcccac acaacctaat cttctaaaaa caaatgatat gatatagaga
     8461 tgtcaactca acctttcatc ccgcatttca ttccacacca aaaagagccg atgataatcg
     8521 tattgattta tcacctgctc taaatattat ttcaatgact agcttcacac caagaatatt
     8581 gattatagtt cttgtttgtt aaaaatttta atagacaata tataagaaac gctcgttata
     8641 actataccaa tgaccgcata tactatgaca actagccatc ctccagtgct aattttttca
     8701 aattctaatg cagatgcacc actaaccata ccatatataa agaaaaagac cacgaaagaa
     8761 ataagtagta gtatagatgc acatatcata atgacattgg agttttcagc gccaaattta
     8821 aatgtcaatg ggaaaatgat agagtatgcc cctatgatac caaaactcat taaacctgac
     8881 ataataccaa tcatcacact ttgggtcaca atcgtagtca caactaatcc aatcattaaa
     8941 cttgcaccga ataagattaa ataaaaggca aagtatgact taatataatc actacgttta
     9001 accggtaaag tagatacata atacatccat cttgagtctt tttcatgttt aatattatca
     9061 gtaataggtg taattaacat aaccccagcc attgcagaac tcatcaacgg attaaatact
     9121 gcaaagtatc ccgcagctat gatagcgact ataaaataaa tatatgtttg ctttctcgtt
     9181 gcataaaaac tacttaggaa catacctttc attatacttc acctcgcatt atgattttcg
     9241 tagcgtcatc aatgtgtttt aaaggctctg cattttcaat ttctgcataa tctttaacta
     9301 aaatttgata tttccccttt gacaatctag aagctataat taaatgctta ggaatttcaa
     9361 catctttatc ttctgtcgta acaattccat attgtgctaa aagtatatct ttctgttcag
     9421 ttaaaatcat tcgtccatct ttcataaaca ctaatttatc cgctaattgt tctatatctt
     9481 cagaaatatg cgatgatatt aagatgcctc caccttgcgc gacaaaatct tctaatagtt
     9541 ccattacttc ttctcgtcca gaaacatcca tacccgcagt tgcttcatct aagatcaata
     9601 gcttcacatc atgagaaagc gcaatcgtca aagctatctt cattcgcatc cctcttgaaa
     9661 aagttttaat tttagtttgt agtggcaact cgaaatattt gattaaatca aagaattttt
     9721 gactattcca agtcgtataa atagattgaa atactttatc tatatcttta atagtcaatt
     9781 tattaggtac tctcaaatca tcaaacacaa cacctatgtg ttctttatat tcgacatcac
     9841 ccgcagcatg ctcttcccca aaaaatgtga tactaccgtt atctttatgt cgattgccta
     9901 ctagaatatt aattaatgtc gatttacctg agccattttt cccgattaat cctactgtct
     9961 cattggtaga aatcgttaaa gatgcatctt gtaatttaaa ttccgaatct ttgtattgtt
    10021 tgttcacacg atctacgttt aacaatgttg tcatatccat gctcctcttt gtttaatttt
    10081 aataaaaacg tctactcttc aataaataac taaaggcgtt atatatgaaa atagcaatga
    10141 taagtagcaa actgaaactt tgattaattc cagtagtaat tgaataaagc ccaattacta
    10201 caatggctag tatcaatatt gataagttga ttgcatatgt tttaaataat gctattaatt
    10261 ctatatggcg ttcaccttca tccaatattt ccaatcgctt ttcagtgtaa ttcttatctg
    10321 caatttttgg cattctgtca tcaaatcttc tattaaacag tgtaaattgt gtattgaaaa
    10381 taccactagc aaaaaatggt attaaaaaga atagtattcc atttgcttca gcttgtccta
    10441 ccacaaaaat aagcaacact aacaaggcaa taactgtctg tagaatactt aatatacttc
    10501 catttaaaac atgacgattc gcaagcaatt catattgatc tgtttcttcg ttatctacct
    10561 cttcatctac aagtcgctta tacttcaatg cacgtctttg attcatcaaa acaatgattt
    10621 ctattaatat gatgatcata gtcgcaacaa tcgatattac aacgacattg ttacgcgttg
    10681 cgaacgtcaa attctcaata cccaatccat caaagttacc taaaattcca cctatgatac
    10741 cacctacaag tccacctagt aaaagatatc cgatatatct tagtattttc atgcctcatc
    10801 ctcctcaata ataaaaatag tttccacttt ttcattgaag atacgagcaa tctttattgc
    10861 agttaatacc gatggcataa agttgtttcg ctcaattagc gaaatggttt gtcttgaaac
    10921 acccgcttgt ttagcaagct gcgtttggtt taagccatct cgtgctcgta attctttcaa
    10981 tcgattacgc acatcgcatc aactccttaa ttacactgta aatgatatgc gtctttttga
    11041 caactatatt tgtcaaaact acacaaaaaa aatataaatg tccacctatg tatgacattt
    11101 tgaaacaaac acctcaacgc ctacaagtca taattgttta ctttcgttac accttcctgc
    11161 ataattaaca gcattctaat tttagtatga tgcacacatt ttcactaaat caaaccattc
    11221 aaaggagact attatggcat ttacattatc tgcaatccaa caagcacatc aacaatttac
    11281 tggtgttgat tttccaaaac tattcaaagc atttaaggat atgggtatga cgtacaatat
    11341 tgttaatatt caagatggca cagcaacata cgtacatcaa tcagaagatg atatcgttac
    11401 gtcatctgta aaaagtaatc atcctgtcgc tccaagatca aatcaatcta tcgttcaaga
    11461 tgtattaact agacatcaac aaggacaaac agatttcgaa acattttgtg atgaaatggc
    11521 tgaagctggc atttataaat ggcatatcga tattcaagct ggtacttgta cttatatcga
    11581 cttaaaagaa caagctatta tttcagaatt aatacctcag taagttgtgt ttatagcaat
    11641 attttaatta ttatataaaa tttgttgata atcattatcg ttcggtataa agtaaatact
    11701 atatactact tatgagtgag gttgattatc atgataacta acacttttat tttaggcatc
    11761 acaggtccaa caagtcttgt cgtcattagc attatcgctt taattatttt tggtccgaaa
    11821 aaattaccac aatttggtcg tgctatcggt tctactttaa aagaatttaa atctgcaaca
    11881 gaagatttag ataaagagtc tcacgataca cccagtaagg aatcgaagca acagcgagag
    11941 caatagtact gatgatacat taatggttca ctttagcgaa ctacgccatc ggttagtaaa
    12001 aattttattg tcgttcgtca ttacggtcat cgtcgtatat gtttcatcat tttggtggat
    12061 gacaccattc ataacgtata ttacccgtgc acatgtgtcc ttacatgcat tttcattcac
    12121 agaaatgatc caaatatacg tgatgattat atttttcatc acgttttgtt tcatttcacc
    12181 agtcatgttt tatcaattgt gggcattcat tgcacctgga ttacataata atgaacgtca
    12241 atttatttat aaatatagtt tttttagcgt gttattattc tgtgctggcg tcgcttttgc
    12301 attttatgtt ggctttccaa tgatcattca attcgcgtta aaattatcat taactttaaa
    12361 catttcgcca gtcattggct ttaaagcata tttgattgaa ctcatacgtt ggttattcac
    12421 atttggcatt ctatttcaat taccaatatt atttatgggt cttgcaaaat tcggtcttat
    12481 agatacatat tctttgaaac attatcgtaa atatatttac tttgcttgct ttgtgctggc
    12541 gagtatcatt gcaccaccag acataacatt aaatatatta ctcacattgc cactcatatt
    12601 gctctttgag ttcagtatgt tcattgttaa gttcacatgc cgcgatgaac caccaacgca
    12661 atgaccttat acgaatcaat actgcaatac tcacaatgca acaacatcac aatagccaat
    12721 aaaagaacaa tgaagcacct cagattatat caatactgca gctaactaac attgcgttaa
    12781 tcagaataca gcatcggatt aaaccgtgat atccacatct ctgcaatgca acgagaacca
    12841 acaatgccgc gatatctgca atgctacgat aatccgccat acagcaacaa aaaaacaggc
    12901 actcggcctg ttttttattt tttaaattta aagattaaga tagcaactac cataatatag
    12961 gtagcttgtg ctatcaatgg ttcataactt gggtagaatc ccaaccagtt aatcgttggg
    13021 aatccttcaa taacatgtct tggcatcgca cctaataatt gtaacttttg aatacttacg
    13081 ccaagcattt tgaatcccat aataaaaata aaaatcgaca atactctaaa tatatagaat
    13141 ataggtatca atctgacgat aaatctaaat aatagcgcaa agacaattaa tatcacaatg
    13201 gccaaggcaa tacctatgac aaaatctttg gtcgctaatt cgcctatcat tcccatatag
    13261 aaaatgataa cctcaacacc ttcacgcaac acagatatta aaccaatcat cgctaacaat
    13321 accaaattac cattactaat cgcattggca tacatatttt taatcatatc attccagcgt
    13381 ttcgcattcg aacgtttatg catccaaaca ccaacgataa acattaatat gaccgcaacg
    13441 atacctaatc ccgcttccat actctcacga agcataccgc tattccctag tgtttctacg
    13501 aatgtaattg ctaaaacgat actcaataca agtccggcaa ttgcaccacc aatcacactt
    13561 gcagtaccct tcttatcttt gacattacgc gtcatagtag tcaatgtcat tacaattaat
    13621 aacacttcta gtccttcacg taaaaagata atcatcacat cgacgaagct ataactatgg
    13681 ccaacaacct ctttaatttg gttatttaaa tctactaagc catctttcac atgtgcttta
    13741 ttatgttcgt ctaatacact ttgataatat ggtattttat cttcaatttt cgtatacaaa
    13801 gcaccgtctt tagtttgaat ttgcccttca acatacggcc aaatttctat aaaatgtgta
    13861 agcacagcat cagcatccga caattgattg ttgtcgatag ctttaatcgc cttctctaac
    13921 tcatcattta attgtgatac atggtattga tcatttgcag acgtatcact ttttttatcg
    13981 acatgatcaa tatttgattt aaaagttgtc caagcatgtg acacttttgc cgtatctaat
    14041 ggtgacttat gaattgcaat tctaagttgt aataatgcga cttcaatttg tccatattga
    14101 tttgcgtcat aattgcgaat cactgtttca ttactagtcc aaatctgatt caaactattg
    14161 ttcaaagatt ctaattccgc tttatttttg tctttaatcg cttttgtcat cgctgcatct
    14221 ttggcatcga cttgctgttg taatagttta attttagaac ccgcatcttt actagccaat
    14281 ttctcttcat aagcaattaa tgacttcgtt aattgcgaaa gtgtatcttt tttatcatca
    14341 ttcgcttttg catcttcaag ctttctcaca tttgatttga cagcattacc ttcgctatta
    14401 tcttcaagcg ataatttctt aactgcactt accacttgct caattgcttt ctgcttattg
    14461 tcattcgata tcgaattatt agaaagtgca gatttcgcat ccgttatcac actatataca
    14521 tcactaatac tttgttgttc tgctgcctga cttttcaata acccaaagtt acacaccata
    14581 gcagcagtaa ttagcattgc tataatttta gtcaaataat gtttcaccaa ggtatcctcc
    14641 cttactaaca cctggtaata ctaaaaatga agcagaacct ctatgtgtaa tgtattcatt
    14701 taacttatca ttactaccta aattgttttg aatatcgata aattgttggg tcgctttttg
    14761 aaaagcaatg aacaacaagc ctgtttcgaa gttacctgtg cggtcatccg taccatcaac
    14821 ataattaaag gctctacgta aaattgacgt atttgcttct ttcgctagtc tcgtatgggc
    14881 atctttatca ataatatact cgccatgact atctttcgct tttaagtcaa tttcatcaaa
    14941 ctctttccca cctgttaacg gtgcgccact atgtcgcttg cgaccaaatg tagcctcttg
    15001 ttcttccagt gcagtacgat cccacgtttc aatgtgtatt tgaatacgtc tgacaacaca
    15061 ataagttcca tgtttcgccc atccgtcatc aataaacaca taatctttaa gttgattact
    15121 ctttctagga ttaattgttc catctttaaa tgccattaaa tttctaggtg tttccttacc
    15181 tttagcagag ataaaaccag attgcgacca acgtacctta acaatatctc gaaatggacg
    15241 aactaaatta tgaaccgcat gaaaggatac ttgcgaatca tttgagcatg cttgaatcat
    15301 aatatcacca tcgctgtaat cgtctattaa ctgatcattc ggaaaatgcg gtaaatcttt
    15361 aaaggcatcg ggaattttac tagataaccc aattttcttc atcaaagact tactaattcc
    15421 aaaggtaatc gttaacttgc ttgcacctaa tccaatcgat tcaccagtat ctactggcgg
    15481 cattaaagga ttgttactgg ccttgccaac tgtatcacca tccatcatac gatcagccat
    15541 aaccgtccac tttttaaaca ttgccttaat tgcatctcta tcttttgact tcaaatctaa
    15601 tgcaacgaaa ttgcatgttt tttgcgtggg tgtggtaatg cctggttgca ctttaccata
    15661 aaattcatac gcatcttttt ccggatcttc tggtgtattg aacattgatt tgaaagacca
    15721 catgctacca acaccacttg cgccaattgc aacaccggca ccgccaatac ctaacatttt
    15781 caaaaatgta cgtcttgaaa attgcgtact atcgttaact tgttcataat ttgtcattca
    15841 gtaatcacag ccattttact tagtggctct cctaatgcat taacagcatc cgcaaatgct
    15901 ttacggtctt tcttcgatac tttttcaaat gactcataac cgccgttgtt atctttatat
    15961 ttatccaata attgattcac tttatcgaag ttcatttgaa tatcatcact taatttttta
    16021 tcttttttct ctaaaatagg tttgaataag tcataaattt tttgtgcgcc ttcaacgttc
    16081 gctttaaaat catataaatc tgtatgtgaa taaatttctt cttcacctgt gattttagaa
    16141 gttgcaactt catttaatag gtcaacagaa ccttgtaaca ttaattttgg tgtgatatct
    16201 aatgtatcag ctttggcatg caattctttt gcatctttca ataattgttg tgcatctttt
    16261 ttagtcacat catcaatttt cttatcttcg tataatgctt tttcaatctt atgatatcct
    16321 gaccattctt tttccttttt ctcttctttc atatctgcaa gacgtgcatc aattttagga
    16381 tctaaatctc caaatgcttc tgcaactggt tcagagcgtt cataatacat acgaactttt
    16441 ggatataacg cttttgcttg ggccatatca ttattttcaa tcgctttaac aaatttttct
    16501 gtacctttta aaaattcatt taactgttca tcagtatatt tatcatatgc ttttgttgct
    16561 tgttttaatt ctgctttaac accatcatct tttttcgatg tctttgaatc atccttctta
    16621 ctatcgtcgt tcccacatgc agcaattaat aatgttgatg ctaataatag cgttgttaac
    16681 tttttcattt tgacacctca ttatagaaat tctattatcc ccatagacat gccctcattc
    16741 gtactatctc acactcccta aatgccaaga taatacgtgg ctcttaaaat gatgatttta
    16801 aggcatcctc ccatgaacat tatctagttg ataataatta tcaaaatcat tatattgtta
    16861 taaaataata ctgtcaacaa cctttttagt ttgaaaataa ataaaagagt aacacttata
    16921 tgtaagtcat cactcttttg tagtctgatt tatcatcctt cattatattc tgattttaat
    16981 aaactataga tgtaactcga tgaataaata ccatttagta attcattgtc acgtaacata
    17041 ccttctctag taaatcccag cctttcagga atagcttgac ttttttcatt attaactgcg
    17101 gcactgatct caattcgatt taggtcaatc tcatcgaagc aatactttat caatgcctca
    17161 actgcttgtg tcataatccc atgaccctca aattgtttat ctaaataata ccctaaagaa
    17221 gtttttctgt gcatgtgatt aatttcatgt aaaccgatga caccaactag cgttccttca
    17281 taccaaatgc cacactgaaa tccattacca tcagcaaatt gcaaaagtcc tcttttaata
    17341 aatgcacgcg tatctgatgg ttgctcagtt gcatctaccc aaggtaacca ttccctaagt
    17401 gaatttcttg aacgattgac taaattgaaa agcgcttctg tgtcatgggc ttctaaaatt
    17461 tttaatctta tttgttcatt cactttcatt ccaaacatac catcacaccc tcatttattt
    17521 ttcatataat tttgtaaatt atcataataa taacatatta atattacgca ttgtatctta
    17581 aatttgttgt ccttccccaa cttgcattgt ctgtagaatt tcttttcgaa attctctttg
    17641 ttggggcccc gccaataagc gttgtagtgc ctattacttt ggttgatgtc caagtttcct
    17701 atcacacaac ttaaattaat cactacttta ttattcattc caaatttata tttaaaaata
    17761 cgacaaaaca gtgctaaaat gctattaaag gaggcactgc tcatggcatc attgaaaaat
    17821 aagcatttta tgattggact atcattaaca tttatagtcg cattatttag ctttttagca
    17881 gctaaattgc caatcttaga taaggttggc gcattaacta tcgcgatatt aatcgctatt
    17941 ctatatcgtc actttagagg atatcctgaa caatatagct caggtattac gttttcatct
    18001 aaatatttat taagatttgc aatcatccta tatggactta aactcaatat attcgatatt
    18061 atcggtcaag gtagtagact attagccatc gatgtaggtg tcgttatttt cagtattgta
    18121 atgatgctct ttgtcaacaa actgttgcat ggtgacaaaa acatcgcatt attactaggt
    18181 gtaggtacag gcgtttgtgg tgctgccgct attgctgcag tagccccaat attcaaatca
    18241 cgtgaaaagg atacagctat tagtatcggt atcatcgcat tgattggtac gatattttca
    18301 cttatatata cagctatcta cgctatcttt tcaatgacga caaatgttta tggcgcttgg
    18361 tccggcgtta gtcttcatga aattgcacac gttgtcttag ctggtggctt tggtggtagt
    18421 gatgcactta aaatcgcact gcttggtaaa cttggtagag tattcttact gattccatta
    18481 accatcgtac ttattttaat tatgcgtttc cgttcatcag aatcatctag caagggccga
    18541 ataagcattc catacttttt aattggattt gtcattatgg ccttagtgaa tacatatgta
    18601 actattccat cagtattgtt aaatatttta aatactgtat caacaatttg cttattaatg
    18661 gccatggttg ctttagggtt aaatgttgca tttaaagatc ttaaaaatcg tgcacttaaa
    18721 ccgcttatga caatcattat tacctcaata tgcttgtcat cacttgcctt tatcgtcgtt
    18781 cactggctat ataattaata tgaaaagacg ctcaaacaca tacaaattta gtgtgccgag
    18841 cgtcttattt ttatacttta aaagtcgtat tggttgtttt cttcttcaag cacttgttgt
    18901 tgtactttgg cagttcgcat tgtggattgt gccaacgctt ttaaacgaaa tacaacatca
    18961 tcattgacaa tttgttgatt tgaaaagtcc ctctcttcaa tgaatacata cgtttgcatc
    19021 gtatgtgctt tcatgtaact caatattggt tttaaatgca tttcaggaat taaataatgt
    19081 ttactagaac ctgctgtcgc tacaagtcct attaccttat cgcgaaacgc attgaccgga
    19141 agtaaatcaa atacattttt caaagcacca gggatggaag cttgaaaaat tggaaaacca
    19201 ataaaaatca catcagcctg cattaacgac gtcgttaatt tatatacatc tcctgtagta
    19261 tctagataat tctttccaac actaaattct aattcaagtt ctcgtaaatc catcaactct
    19321 atttgatgtc cctcattgat gacttctagt tcatttttta aatcatccat agcaattctc
    19381 gttttagaac ctactgtgga acctgacaat aatacaatat tcatgatgac gcccctccta
    19441 ttttgataaa tgctttttaa tcgccggtat aatgtcgttg ccaattaact caatattctt
    19501 cataacattt tcaaatggca caccgccaaa atcaatctgt gccataaatc gttgatgacc
    19561 atacaactcg tgttgataca atatcttttc aataatttgt tgcgggcttc caaccattag
    19621 cgcttctcta taatctggtg aattagcaaa ttgctgtttc ggataaccaa cgccacgaat
    19681 aaatgacatc cctgtattca aatgtggata aaattctctc atagcatcct gagttgtttc
    19741 agctgtataa aacagactcg ctgtacttac tgctaaagac ttaggcgaag catcgaaacc
    19801 tgcttcagtt gccgcttgac gataagcatc tatagaacct ttaaagttca ttgctgggcc
    19861 accaagggtt gtaatcatca ttggcacacc ttgttttccc gctttgatag cacttgcagg
    19921 tggaccacca acagcacgcc atattggcaa tgtattatca attggtcttg ggaatatttt
    19981 catatttcta agttctggac gatattttcc agaccaagta atacgttcag ttttatttaa
    20041 ctctaaaagt aaacctaatt tttcttcaaa caattcatca tagtctttta aatcatagcc
    20101 aaacaaatca aaaatacctg ttcttgatgc tctaccagcc acaatttcgg ctctaccatg
    20161 agaaatcaaa tctaatgtcg cgaagtcttc aaatactctt acaggatctg ttgcactaat
    20221 aatcgttgaa gaacttgaaa ctttaatatg ctttgtcgct tgggcaattg cacctaacac
    20281 aaccgtatgt gcctgtgttg taaaatgctc ctgatgactt tcaccaactg caaaaacatc
    20341 aatacctgct tcatctgcta atttacttgc ttcaataatt tcattaatac gttgctcata
    20401 actaactttt tcacctttaa atggattcaa taaatgatca cctaaggaat acaaaccaaa
    20461 ctcaagaggc gtatttttat tcatttctaa ttttgccatt aaacattctc ctttatattt
    20521 cgtgtaactt actttcaatt tgttcacgtt ctgcttctaa aaagtcaggc aagttcaatt
    20581 gacttcctaa ttgttcaaca ggtgtatcaa tagtaaatcc aggcgcttca gtcgcaaatt
    20641 catacataat tgaattatgg cgatagtata atgatttaaa gaaatagcga tcaattatac
    20701 ctgaattact ttgtggttgt tgttgtaatt tcttgtaaat tgcatctaag tcactcattt
    20761 gtggtgtatt aactgcaata tgatggatat aacctcgtcc aggtctttca cgttgtccct
    20821 gttgctcaat aactacaaaa tccgaatata aaccttgtgg tgctaatgtc agcacatcga
    20881 atgctttatt atctcttttg cgataaccta agacattttc caaaaattct accgtacgcg
    20941 ctgcatttct aactcttaat tctactggcc ctattcctaa aatttgatat gcttgaggta
    21001 tttcactata agcgttatgt tgccattgat gtggtacttc aaaactatca ttaacaagca
    21061 gtatgatttc taagtcgtct tcatctttaa agacaacacc ttcttgtcca agatagtaca
    21121 aatgttcaga cttaatacca ttattctcaa gacgtttttc aaaataatga agtgccgctt
    21181 gatttggtac taataatgaa aatcgataaa tcgtttcagt acctggctgc ttatgacccg
    21241 cattgggaat ttcaaaaaaa cttaaaattg ttccggctgt acctacttcg tccccataaa
    21301 acaaatgata cattgaagga ttgtcttgat taaccgactt ttcaaccaat cgtaatccaa
    21361 ggacatttgt gtaaaaatcc ttattacgtt ttgcatcttt tgtatacatg gatatgtgat
    21421 gatgccctac tatattcata ctatccctcc tattagtata aattttatac caacttacat
    21481 aaaaaagata gttatatgcc atttacccct tttctgcaaa taaaaatatg tttgcactca
    21541 ttcgtagata cacatctagt atgtataacg acataataat tgcataatta taaatttatg
    21601 tgtggcaatt tattttttct aaatgtttat aaaataattc aaaaactaaa tctgcaagat
    21661 ttcacaaaag tatattgaca acgctttcat acatgtctaa tataagttta tcgcacaaaa
    21721 tgcatataaa tacatattaa ggaggatttt atgaattttc ttaaacctgc aaagcatatt
    21781 aagcctttgc cagaaaatca gatagatgat acctataaac gattacgtct ccaagtattt
    21841 cttggtattt tcatcggtta cgctgggtac tatttattac gtaaaaactt ttcattagcg
    21901 atgccggcat tgcaagagca aggttttaca aaagcggaac taggttttgc actttctgct
    21961 gtttccatcg catatggatt tagtaagttc tttatgggta ctgtaagtga tcggagcaat
    22021 gctcggatat tcttagttct tggattagta ctcactgcta tcgtcaattt gttaatggga
    22081 tttgtaccgt tctttacatc aggtatcggt attatgtttg tcctattatt cttaaatgga
    22141 tggtttcaag gtatgggctg gccaccttca ggccgtgttc tcgttcactg gtttagtgta
    22201 agtgaacgcg gaagtaagac tgccctttgg aacgttgcgc ataatgttgg tggaggtatt
    22261 atggcaccta ttgctgcttg gggtattaca acaacagcat ttatcaactt tggttattta
    22321 aaaggtttcg aaggtgtatt catttaccct gcactcttag cacttatcat tgccgcaatt
    22381 tcatacgtat tgattagaga cacacctcaa tctcaaggtt tacctccgat cgaaatttat
    22441 aaaaatgact ttgctacaag cgataagaaa acattagaaa cagaattaac tacaaaagaa
    22501 attttattta aatatgtact gaacaataaa tgggtatggg caattgcctt tgcaaatata
    22561 tttgtttatt tcgtgcgtta tggtgtactt gattgggcgc cagtctactt aagtgaagaa
    22621 aaacatttcg acttaaaagc atcaggttgg gcatacttct tatacgaatg ggctggaatt
    22681 cctggtacat tattatgtgg ttacatttct gataaattat tcaaaggtcg tcgtggacct
    22741 gcaggtttct tctttatgtt aggtgtcaca gtatttgtat taatttattg gttaaatcct
    22801 ccaggcaatg cttggttaga caatgtctca ttaattgcca ttggtttctt aatatatgga
    22861 ccagttatgt taattggttt acaagcatta gattatgtac ctaaaaaagc agctggcaca
    22921 gcagctggat taacaggatt atttggttat ctgtttggtg ctgtaatggc caacatcgtc
    22981 ttaggtgctg tagttgataa attcggatgg gatgtcggtt ttattttatt aacagcaatc
    23041 agtgtgtttg caatgttgag ctttatcctc acttggaata aagtaggaca agaaaccgtt
    23101 catcattaaa tgataaaaaa taaagtcata tggttatctt atcgaaagat gatatattca
    23161 tctcttataa gttcaaccat atgacttttt aattagtatt caaaaaaata tttacattgc
    23221 cagttttgtg tttgctctgc tcttttattc aattgattac accacttagg ataaactcta
    23281 aaagccatct tacctttatg ttcaaatgta gttaagatgc ctttttctac caataattct
    23341 ctaggaaata agaaataacc gcttaattct tcatcaataa ctataatcat taagtaatct
    23401 gcaaatgcct cttttgagta tggttgatta caattgttct cgtcttttgt ccaacatgta
    23461 acaaaatacc ctgctttagt cggtgttttc ttagctaacc tactttgata tgtttcctct
    23521 ttaaagctaa atgttaatgc ttcgtaatct tgattatatt tttcttcagt taaatcttta
    23581 acttctgatt cttcactaaa aatatatttc aacagtattt tagatttata catatgccaa
    23641 tctcacttta ttttttcata atcgtatcat atatttattt tttcgaaaat tacacttccg
    23701 accgaaatat actcagcgag aagtgtacga aatatttaac cttctattaa ttcagatgta
    23761 tcaactgtca aacgatcacg taataaatag acgattaaca ttgctgctaa agcacaaagt
    23821 gactcagcaa ttaataatga ccaaatgaca cctgttagtc caaacaaagc attcataata
    23881 aataatacag gaatgataat cgcaccttgt aaaatggcca taattgtagc accgcgacct
    23941 tgaccagttg cttgaagcat accagtaaac aagaaaccta taccatttaa taataatgat
    24001 gtcattgtta ctttcaaaat aaatgtcgcc atctcaacaa tggcttgatc agtagtaaat
    24061 agtccgacca tatgatgtcc aattgtaaat acagcaatca tacatacaac aaagataacg
    24121 ccgatagaca tgataactgc tttgataacg tctttcatac gccctttatt tgacataaag
    24181 ttatatgcaa ttaatggtac aacaccttca cataatccca tgataataag ttctggaaat
    24241 tgcacaagtc taaatgagat accataactt gcaatcgcga agtttccata atgtgctaaa
    24301 aataaattta aaactaatcc tgtgaatccc attaagatac tcattaaaaa tgcaggaata
    24361 cctattttaa agatttcaga aagcatttct ttattaggtt tcgcaagttt aatattaact
    24421 gacacaacgt cactattttt cataaaataa atgataaaga acagagcagc agcaacatta
    24481 ctgattgcag tacccaaagc tgcaccaaca acgtttaaat caaaaccaaa aattaaaatt
    24541 ggatctaaaa taatatttaa gcctacacta gctaacatac caatcataga aatcattggt
    24601 gccccaattg cacgtgcaaa ttgttctaat atgaagaaca aaattacaaa aggtgcactt
    24661 aaaaacatta ctttcaaata attacttgtt aaagctaacg tttcacctct cgcccctaaa
    24721 attgctgcga tttgatcact gaatggtaaa gcaactaaaa ttacgataag tcctagtgca
    24781 ataccaccat aaatagagaa actacttaca aatttactct tactatagtc tttcgcacct
    24841 aataaacgtg aaatataagt tcctgcacca acgccaaata aattacccaa ccccattaag
    24901 atagcaaata ctggcagtgt tagtgagata gcagaaatca tgtggctatc ttctaaaaat
    24961 cctataaagt aaatatttaa tatgccataa ataacgctta ataaagtccc tatcatcatt
    25021 ggcaatgaga aatgcatcat cgctttaaat actggcgatt tctcaaaata atataattgt
    25081 tcgtctttca ttgttcaata ctccttgtct tttccgataa ttagcttact aacaattaga
    25141 tatctaacta taacattaaa gataaagtga ctgatttcta ccagtcactc taccatttat
    25201 tgtaaactag ataacatttt cgttaagttt gctttcattt gttcattttc ttcttcagat
    25261 aactgcgata cgagtgtttg ctccatttca tcaaatatcg aagtgaatgc ttctacaagt
    25321 ttaatcccag aggtagtcag tcctatattc tttcttctcg tatcttgtgc atcgatatag
    25381 cgatagatca gctttttacg ttcaaggttc cttaataaat tactgacagt tggacctgtt
    25441 cgttgtaatg ctttagcaat atcattttgt gtcagtccat cttgttgatg tgcataaaga
    25501 taacctaacg tatgaccttg ctcatttgta atatcaaatt gctctaactt ttgatcagcc
    25561 ttttgtttca tctcatgact aatcattcta aataaatacg aataagtgaa ttccatttat
    25621 tgcaccacca tttcgttaga tgtctaacta aatatactgc gacattttta aattgtcaac
    25681 atgaatatct aatttatttt aaaagttcct ataaaatctt gcatcataaa cattttgata
    25741 tgcaattttt cggattaaaa tatgaaagag attgcatatc tacgctttta agaaatcgct
    25801 tacaattaca aataggagga tattacgttg ttaagttata gacaaatcga aattttgtat
    25861 cttttaattc atgagcaaac gtttattcca atcaatacca ttgctaagca acttggtgta
    25921 tcacctcgta ccattcaata tgatatagca tatattgagc aatatgctga aacttatcat
    25981 taccaagtca gccgtaataa agctgcaggc atcaaagtaa caacagctaa cacaacgata
    26041 ttaaatgaat tagagcacaa tctaacgaat caaattcatt tttcaaaaga tgagcgactc
    26101 acacatatcg ctttaaagtt attcgaaaca actgatcctg tttcaacaaa gcaacttgca
    26161 caagatgtta atgtttcgcg tcggacaatt gcagatgata ttaaaatgat tcaagcccaa
    26221 ctagatcaat accatttaaa gttaaattat gtccacaata aaggattcaa tattattggt
    26281 gaggaagatc attatcgtaa agcgtatgca cactttatac atcaatatat gaaacaagct
    26341 gcacctttta tagaggctga tatctttaat tcagaatcaa tcgcattggt tcgccgtgcc
    26401 attattaaga cattaaatag tgaaaattat catttagttc agtcggctat cgatggctta
    26461 atctatcata tactcattgc cattcagcgt ctaaatgaaa atttttcgtt cgatatacct
    26521 atcaatgaaa ttgataaatg gcgacatact aatcagtatg ctattgcttc aaaaatgata
    26581 gaaaacttag aacgcagttg taatatcaca tttccagagt ctgaaattat ctttatcacg
    26641 ttacatttac taggctctaa aatgaccgaa catacagcat cttcaattac ctttgaatac
    26701 catgatttat cgcaaaatat acatgaattg atcacttgtg ttagccaaga attaggcatt
    26761 gatatgtcaa aagacaacaa gttgcatacc agtctgatca cacatatcaa accagctata
    26821 catcgtatta aattcgatat gctacaacct aatcctttga ggcaagaagt tatgcgtcgc
    26881 tatcctcaaa tcattgaagc cgttagcaag catattagcc caattgaaca agatgctgct
    26941 attcgcttca acgaagatga attaacatac attacaattc atttcgcatc aagtatagag
    27001 cgtgttgcaa cacataaaca atcaatgatt aaggttgtct tactatgtgg ttctggtata
    27061 ggcacgtcgc aacttttaaa atcaaaacta aatcatctgt atcctgagtt tcacatttgg
    27121 gatgcctatt ccatttatca attggaagaa agtcgattat tgcaagataa cattgattat
    27181 gtcatttcaa cagtaccttg tgaaatctca gctgtaccag ttattcatgt cgatccattt
    27241 atcaatcagc aatctcgtca aaaattgaat caaattatca atgactcaag agaacaacga
    27301 gtcatgaaaa tggcaactga tggcaagtca ctcgcagatt tattgcctga acatcgcatc
    27361 attataaata aacaaccatt atcaattgaa tcggcaatta cagtggctgt gcaaccttta
    27421 atcaatgatg gcattgtcaa ttcaaattat acagctgcaa ttttaaaaca attagaacaa
    27481 ttcgggtcat atatggtcat tagtccacat attgcactta ttcacgctgg tactgattat
    27541 gtacagaatg gtgtaggttt cgcactaact tatttcactg aagggattat ttttggtagt
    27601 aaagctaacg atcccgttca ccttgtcatt acattagcaa cggaccaccc caatgcacat
    27661 ttaaaggcat tgggacagtt aagcgaatgc ttaagcaacg acttatatcg acaagatttc
    27721 ttagatggga atatttttaa aattaaacaa cacattgctt taactatgac aaaggaggtt
    27781 taataacgtg tcattagaca ttttgtcaac aacacgcatc attgtaaaag aacaagtaaa
    27841 tgattggact gaagctataa ctatagcttc tcagccatta ctacaagaac aaattattga
    27901 acaaggctat gttcaagcaa tgattgatag cgttaatgaa cttggacctt atatcgttat
    27961 cgcacctgaa attgcaattg cacatgcaag accgaacaat gacgtacatc aagttggttt
    28021 aagtctatta aagttgaacc aacatgtggc attttgtgat gaagatcact acgcatcact
    28081 catttttgta ttgagtgcca tcgacaatca ttcacactta tctgtattac aaaatttagc
    28141 aaccgtactg ggcgataacc aaacagtcca gcagctatta actgcaacaa acgcacaaga
    28201 cattaaaaat attttaaagg agcatgatta atatgaaaat tttagtagta tgtggccacg
    28261 gtttaggaag tagttttatg gtagaaatga atgcacaaga agcgcttagg caacttaatg
    28321 caccatctga tatcgaagtt gaacatagtg acattatgac agcaagtcca gagatggctg
    28381 acttgtttat ttgtggtaga gatttagctg aaaatgccgg acgtctaggg gatgtcttag
    28441 ttcttgataa tattttagac aaagctgaat tacaacaaaa gctcgcagaa aaattacaac
    28501 aacttaacat gatttaaagg aggtacgacc tatgcaagca atccttaatt ttatagtcga
    28561 tattttaagt caaccagcca ttcttgttgc actgattgcc tttataggtt taatcgttca
    28621 gaaaaaacct gccgcaacaa tcacttcagg aaccattaaa acgatattag gcttcttaat
    28681 tttaagtgca ggtgctgatg tcgtcgttcg atctcttgag ccattcggca aaatattcca
    28741 acacgcattc ggtgtgcaag gtatcgtacc taataacgaa gctatcgtct cactagcctt
    28801 aaaagatttt ggaacaacag ctgcactcat catggtctgt ggcatgattg ttaatatttt
    28861 aattgcccgc ttcactaatt taaaatatat ctttttaaca ggtcatcata cattttacat
    28921 ggctgcgttt ttagcaatca ttttaacagt cagtcatatt aaaggctggc taacgattgt
    28981 tatcggcgca ctcgtattag gattaatcat ggcagtctta ccttcattac tccaacctac
    29041 gatgcgaaaa attacaggga atgatcaagt agcgttaggt catttcggct caatcagtta
    29101 ctttgccgca ggtgctgtag gtcaattatt caaaggtaag tctaaatcaa cggaagagat
    29161 taaatttcca aaaggcttaa gtttcttacg agaaagtaca attagtatct cgattacgat
    29221 ggcattactt tacttcatcg catgcttatt tgcgggcgtt agttatgtac acgaatctat
    29281 tagtaatggt caaaacttta ttgtcttttc attaattcaa ggcgtgacat ttgctgctgg
    29341 tgtatttatt attttaacag gcgttcgctt aatcttagct gaaatcgtcc cagcatttaa
    29401 aggaatttct gaaaagcttg taccaaattc taaacctgca ttagactgcc ctattgtgtt
    29461 cccttatgca caaaatgcag tactaattgg attctttgtc agctttatta caggtgtcat
    29521 tggtatgttt atcttattct tatttggtgg cgtcgtcatt ttacctggcg tagttgcaca
    29581 cttcttctta ggtgcaacgg ctgctgtatt cggtaatgca agaggcggta ttaaaggtgc
    29641 tgttgctggt gccgctctaa atggtatcct aataacgttt ttaccattat tattcttgcc
    29701 atttttaggt gaattaggtg gtgctgcaac aacattctca gatacagact ttttagctgt
    29761 cggtatcgtg ttcggtaacg cagtaaaata tatgggatta tttggtgcga ttctatttat
    29821 tattatcgta ggtgcaacag caattttatt aaaaggtcgt caaaagccac agcaatagtg
    29881 ttaacgtaaa aatataaaac accgtcacat attgagtgaa tgcccctttt atcaagagga
    29941 aagccactta cttatggacg gtgtttttgt attatattaa ataatgttta acgagggtgc
    30001 gacattaacg cctaaacaat attaacttaa aatcatctca accaatgatt caaccgtaac
    30061 attaccaaaa taataaacga tgtctaattg ctttaactga tgcgttaaat cttctcttgt
    30121 catttttgtt ccttgtaatg cttgttccac atcttttata tcaccttgtc caaagaaatc
    30181 accaaaaatt ctacaatctg caatacgatt ttgttcaaca gaaatggtaa tatctacagt
    30241 acctgatgat aatctttcac ttcgattata ttcatattta ggtgacttcc cataattcca
    30301 atcccaattt ttatactttt tactcgccaa ttcttcaatc gattcccaat ctgcatcaga
    30361 taattcgtat cgtttcgcct ctttaatgtc atcgattccc aaaatctgcg tcaccattaa
    30421 atttttaaat tcttcaatgg ttatatcccg atacttttca tccagtgctt ctctaagatg
    30481 accaacacgt gcacgcacag atttaatccc tttcgatgca atctttttgc gattaggctt
    30541 taacacttta tccattgctt cataattaac atcaagtaat agcgaataac cgccataaat
    30601 acgattgttc attaatgtca ttgcggcgcc tgacactttt ttaccattca aggttaaatc
    30661 atttctaccg ctttgtatca catctgttgc acctaatgta tgcaacgctt ttatagctgg
    30721 ttgataaaat cgttgaaaat caccataaat tgaagtgtct tgttctaaaa tacaacacat
    30781 attaacggca cctttatcaa catacacagc gccaccacca gtatctcggc gaactacttg
    30841 aatactatgt ttatctatat aatcttgatt cacttctata gcagtatttt gaaaacgtcc
    30901 aatttccact tttggatcac aataataagg aaataaaata tcttcatcta aaaagatatt
    30961 ctggttaaca taaacttgca tagcgagtgc aatcgcacca tcagtaatat attctccatt
    31021 cctaatcggt tctattaagt acatcttctg tctctccaat gttgttattt ttcgttgtgc
    31081 tgtcgttccg gagtgctgct gtaatcaatg ttgagatatc atcagtcaaa tgtatggtac
    31141 gttcttgaat tgaactcgga atgcgatatg cctttttatt catcgtcata taaagggcat
    31201 tttcattttt acgtgtcata cgctgaaaag gatgcttcac aaattgtggt gtagtataac
    31261 caattccaat ttccaaatac aacactttat catcttgatg ttgctctaga aaagcattat
    31321 aacgttgtag ttgcgcatga aattcagcat cttcaaccat gccaacttcc gctttacgtt
    31381 tattcacttc cattggggca tcacattttg gacatcttgg aatcatctcc caaggtataa
    31441 gcatatcttg ttgcgcaaca accattttac gaattaaatc atcattgcga tacgtttgag
    31501 catgacaatg ctgactacac tgttgcagta tatactcccc ttgtatatga aatacatgag
    31561 tcatatcata ttcagcagca tcgaaagcat tgtctgcatt cgtagttatg atatggtact
    31621 gtttaccttc cactaaagat tttaatgcga gataagactg acctacaggt tgatctaaat
    31681 agtttaatgt aataaaacga ctctcaaatg cccaatactc ttgccaactg ccataaggat
    31741 gtaaactcgc ttgcaacata tcaaagaagc gatatttttc aataaaatct gggaaatttt
    31801 ccgtaaaacg ctctcctaca tatgtaaatc cgtcagatgc agacatgcct gcaccaattc
    31861 caatcactat cgcatctgct tcatcaatcg cagtacgcaa tacttcagcc tgctttgtct
    31921 tgtcatctat taaaagagac attgcattcc atttactact ctgcatcacg gttaaatgcc
    31981 tccttataca gttgtaaatc cttatctgta aatacattga acacgacttt caatgttgaa
    32041 tttgtttctt tgagatagct ttctactgtt cgaatagcaa tttctgctgc ttcatcttga
    32101 ggaaaagcaa atacacctgt agatatacag caaaaagcga catgatttaa actatgttga
    32161 tcagcaagct taagacagct caaatagcat ttagctaaca agtcctgatt catctttgaa
    32221 acaggcaatc gacgtatttg cggaccaacc gtatgaatta tatactttgc tggcaaatta
    32281 tatccacgtg ttattttggc tttacctaca gcttcattgc gcccttgttg tcgaataatc
    32341 tctgcacaat caagtcgaac ttgaacaccc gcttttgtat gaataatatt atcaatgcag
    32401 tcatgattag cttgcataca tcctagaaaa cgactatttg cagcattaac aatagcatcg
    32461 atttttaacg tcgtgatatc accttgccaa acaaagatat tgtcaccttt tatcggcttc
    32521 aaatctttca aatccgtaac atgttgacga ttcaaatcat ttaacagagc atcttgtaca
    32581 gctaaatatt catcacttac aggtaatgcc ggtctgacat ttgctaaacc tcgatataat
    32641 tcccacaaat cttcaaatga agatggcatt accaatacgt cattgtcatt tctctctcga
    32701 cgcatatcat tgattaaata ttcaagtctc gctttatttg attttaacgt ttccatttaa
    32761 gcctccggta atgctaggaa tgcttcttta tcgacatcat ccaatttgaa caaccaattt
    32821 tcttctggtt tttcagagtt taaaattgtc ggttcttctt ccgcttttgt atttcgctca
    32881 ataatcgttc ctgacaatgg cgtttgcaca tcaatgaccg ttttcgatgc ttcgatactc
    32941 acaatttcat catccacttt aacttcatct ggactcacga attcaacata acctactgtc
    33001 ccaatatcat cttgcaattc aggtgtcata ctaaacacat acaaatctcc tactttttct
    33061 acccataaat aattggctaa ctttttcatc ttatcttcat cctttctctt ctatttaaaa
    33121 tgctacaaat agatttccgc gagtaatttt aatgttttac aacgctgttc aatgcctgga
    33181 ataagcggtg ctactaacac ctcatcaact tcaaacgtag caatgaaatc atctaattgt
    33241 gctttaacct gttcttgtgt gcctgcaatg atgcgtgctt gatgtgcttg aatcatctct
    33301 ttgtctcgat cattaagctt atacttttgc gctgtgtcta ctgaaggaaa atgttcaaat
    33361 tctgcaaatt gtaatttacc taataaccaa acatctaagg catgttgcaa tgctgctact
    33421 tccgcttcgt tatcagctac aatgacaaat acagatgcca tcacctttgc gcccatttta
    33481 atcgttgatg cttggaaata ttttttgtaa atatcaatgt tatccttcgc tgcatgtatc
    33541 gcatttatat ctggtagcaa aaatgttcca acagaaagcc ctatacctag ttcggccgct
    33601 attttggcag atgttgcgct actacttaat aaccacattt ctggaaaatg atcaatgtgt
    33661 ggttggacac ctaacgtatg cgcacttggt ttatccttta ttgtaagata atcacgtaat
    33721 aacgaaatcg attcatcgta actatcatat gtaggattta ttccatctaa agcttgcttt
    33781 accatagtag tacctggatt attaccaata cctaaatcaa tacgatttgg atataacgct
    33841 gtcatcattc taaaatactc agcaatttta taaggtcgat agtgcggcaa catcacacca
    33901 ccagagccaa ctcgtatgtg atttgtctgc gccaatgtat gcatcatcaa aagttctgga
    33961 ctactacacg caaacgctgg tacattatga tgttccgtaa accaaattcg cttaaagcca
    34021 agtcgatctg ctaattttgc aagtgtcact gaatcttgca atgccttttg tgcatcctta
    34081 ccttcatcta ttaaggcata gtctaatacg cttaatttaa ccaatccgtc atctccaaac
    34141 ttatcctgtc atgtcaaacc gacataacat tttaacgttc ttaataccat tccctcttca
    34201 tatacccacg tatatgataa cgtttttcaa ttaactttta tatcttttcg cttttatttt
    34261 tctttttcat attttcagac ctacaaatgc cattcattag tttaatttta aaaatgcttt
    34321 ccatgtacca attctattct atcaagactg ttcatcattg attattcagt ctttccatgg
    34381 tactttgaaa acaatattga atagaaaagg aatcatagta tgtaccgata caaaccactt
    34441 ttacaatcaa tccacttacc taatggcatc aaaatttcga atcgctttgt attatcacca
    34501 atgaccgtaa acgcatcaac aaaagaaggc tatattacaa aagcagactt ggcttatgct
    34561 gcacgtcgct ctaattcagc tggtatgcaa gtcaccggcg ctgcttacat tgaaccttat
    34621 ggtcaattgt ttgaatacgg ctttaatatt gatcatgatg cttgtatccc tggattaact
    34681 aacatggcat ctacgatgaa acaacatagt agcctcgcta ttattcagct agcgcatgct
    34741 ggtcgttttt caaatcaagc aattttaaat tttggaaagg tgtatggacc aagccctatg
    34801 acgttgcatt caccgattga acacgatgtt atcgccatgt ctcaagagaa aatcaatagc
    34861 atcattcagc agtatcgtga tgctacatta cgcgcgatta aagcaggttt tgatggtgtg
    34921 gaaatttcga ttgcacaacg tttgctgatt caaacatttt tctcaacttt ttcgaataaa
    34981 cgtacagacc attacggtgc cgactcatta aaaaatcgtg caaaattatg tttagaagtt
    35041 atgcgtgcgg tacaagaagt gattgataaa gaagcacctg acaattttat tttaggattt
    35101 cgagcaacgc cagaagaaac cagaggtagt gatttaggat ataccattga cgagttcaat
    35161 caattaatcg attgggtcat ggacgtttca aacatccaat atttagcaat cgctagctgg
    35221 ggtcgacata tttatcaaaa tacgtctcgt acaccaggtg aacatttcgg tcggccagtt
    35281 aaccaaattg tctatgaaca tttagcaggt cgtatccctt taattgcaag tggcgggatt
    35341 aattctccag agtctgcttt agatgcttta caacatgcag atatggtcgg catgtcttcg
    35401 ccttttgtca cagaacctga ctttgtgcat aaacttgctg aacagcggcc acatgatatc
    35461 aatcttgaat tttctatggc agatttagaa gatttagcca ttccacatgc tgcttttaaa
    35521 gatattgtta aaatgatgga ttatggggaa agtctaaaga agcatacccg tgacgcttta
    35581 cgtcaattgg aacagaatta tcatgactca tcgtcttaag actatttttc atggaaattt
    35641 aatacagtgt tataatgaca tcaatttcaa aaataaggag tctgtatagt cgtgactgaa
    35701 attaaagata aagtaattac taaagatgca tttgcattac cttacacaat tattaaagca
    35761 aaaaatcaac caacaaaagg cgctattgtc tacatccacg gtggtggatt aatgttcggt
    35821 aaagctaacg atttatctcc acagtatatc gatatcctta cagaacatta cgatttaatt
    35881 caactaagtt atcgtttatt accagaagta agtctcgatt gcattattga ggatgtctac
    35941 gcatcattcg atgcgattca atcacaatat tctaattgcc ctatttttac ctttggcaga
    36001 tcatcaggtg catatttaag tctattaatt gcacgagaca gagatattga tggtgttatt
    36061 gatttttatg gttatagttg catcaacact gaacctttta aaatggcaaa tagctattac
    36121 gctaaaatag ctcaaagcgt aaacgaaaca atgattgcac aactcacttc accaacaccg
    36181 gttgttcaag atcaaatcgc acaacgtttt ttaatctacg tttatgcacg tggcacaggc
    36241 aaatggataa atatgattaa tattgctgat tataccgatt caaaatacaa catctcacca
    36301 aatgaactta aaacacttcc acctgttttc gttgcgcatt gtaatggcga ttatgatgtt
    36361 cccgttgagg aaagcgaaca tatcatgaat catgttccac attcaacatt tgaacgcgtg
    36421 aataaaaacg agcatgattt tgatcgtaga cctaatgacg aagcaatcgc tatttatcgt
    36481 aaagttgttg atttcttaaa cgctataaca atggcgtaat ataccattat ttttaaaaac
    36541 tcaatttatc atcatgataa acagttattc aatcaaccat attattcata caatttatta
    36601 agctcataaa cagatacgcc tgtcccttta gttttcgcta atgagacagg cgctttattt
    36661 cactttacta tttttaaatt caacactgtg atgttactta tatctgctgt gccatgttag
    36721 tagcacgaaa tgcatagcat attaaattac gaaaatgaat ttaacttgct ttcaattgtg
    36781 tacctttacc ttcagttgct tcaacacgca acaagtcatt tataatacct gtatagaagt
    36841 tggcgagttc tgcaccttta cgcttgaaat ctaggaaatc tacaccgata aaatcgacat
    36901 gatcccatcc ttgtatgatt ggtttaactt gccagatacc tcttcgtgtg gcaggttcat
    36961 cattcgtaac attaacaaat ggttgattgg acggatgtaa tgacgaaatc actggtacga
    37021 caccatcatt tttacgccat tcttctcttg catcatgacc aataattcta ctcgttgtat
    37081 ccattaagaa aaatgtacct aaatcaggat tttcatatcc taatggacca gtatgagatg
    37141 atacacctgt ataagtcgtg tacgtaatat ttggattcat acttgtcatg ttgttcaatt
    37201 ttgcagagcc atctaacgtt aaatcatagg cagcattgtc gtctgatgtc caaattttgc
    37261 ttttactaac gcgttttata tagtcaatgt aactctcatt tggtaattgt ttaaagcccc
    37321 attgcgttaa tcctaaatcg atattcgaat acttgttacc cataaatcga tttaaagcga
    37381 acatgatttt tctaacagct tctgtatttc caaacttatc agctgcttgt gaaccattat
    37441 gtggtgttgc taatgttgtg attgatgcaa ccatattgtt atgaccacca gtgaataatg
    37501 gtgatatttc tccaccatgc gctttatgat aggcaatttc ttctttgtta ccatttctta
    37561 aaaactcttc cattaaacga attgtttgac cacccatact atgccctaca agatgtacct
    37621 ttttaccagg ttcccaatta ggcatgattc ctttatatgt cttaccatag cgctcatgtc
    37681 cgtatttagc tgcatgtgct gcaccataat ctacgcgacc acctttgatg taataataaa
    37741 gttctacagc acgatcatag ttgctaccaa atgcactaac acttgcttga tgtacattat
    37801 agccttgctt tctcaattct tcgataactt taaatttatt cccaccccaa taatttgggt
    37861 ataaagcagg tgcattatcg cctactaatc ctaaaaatcc atgtacaaaa acaactggat
    37921 atttgttaag tggttgtact tgattcgctt taagtggtcg aatcttttta gcatctgctg
    37981 ctgcatttgt agtcgaacgt gttttaggcg cttgaagcgc atctttgatt agttgtttat
    38041 tatcagtatt tttatctgtc ggtttctccg gggaattttg accatcgata tgtttactta
    38101 aatcgccaac ttgtggtttc tgttcacttt ggcgaacagt atcatcttgc tttgcatcta
    38161 tgatttgatg cgccggttga tgtgtatctt gttgatttgg atgtttgtcc gtggttgcat
    38221 cttgtgcttt tgttgattta ggtgcagttt tatcattaga tgggggtgtt gttgaagttg
    38281 gtgctgcttt atcatgattt ggtattacct tttgtgccgg aatggatggt tgtgatttat
    38341 caacatcatt cgattgtgac gttgtcgatt gtgatccatt acgttcagca tgatgggtat
    38401 tttgaacctg atcattttgg cgttcagttt tgttagtcgc attattttga tgtgactgtt
    38461 tagaaccttg tcgttcagaa tcttgcttta cttgattatc attttgcgtt ctgcttgttt
    38521 tactattttg tgttgattga tgcttcgatg attgaagcgt atctttacct tctgtcactg
    38581 ttccactttt accattctct ttatgcatat cgtctaattg ctttcctgac tgcatttgat
    38641 gtgacgttat cgcgttccct tgttctcccg gttgatttag tgtttctttt tgtgccgctg
    38701 cattagacgt tagtgttttt tccgaggctt gtgcttcatg tgatgaaaca ataaacattg
    38761 tagccgctaa cactgacacc acgcctattg aatactttct aatactatac tttctttctt
    38821 cttgtcctcg taacatataa tcacctcaaa agtatttttt tgaccccctc ttgagaatga
    38881 aaaacaactg caccttcaat ataac
//
LOCUS       DALMNS010000008        37391 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.008, whole genome shotgun sequence.
ACCESSION   DALMNS010000008 DALMNS010000000
VERSION     DALMNS010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 37391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37391
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.008"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(56..175)
                     /locus_tag="O6Y56_000358"
     CDS             complement(56..175)
                     /locus_tag="O6Y56_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573654.1"
                     /translation="MAEQSKQKQANEQQKAQNLFARWRQLQNSNSESSNDTNR"
     gene            complement(249..722)
                     /locus_tag="O6Y56_000359"
     CDS             complement(249..722)
                     /locus_tag="O6Y56_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4930 family protein"
                     /protein_id="HDB5573655.1"
                     /translation="MRLIFSMIKNIIAVIAIVIIVYIALKYAPFLKEQDWNPVNHDND
                     QTNQVTQPTNDAQHVYVSGEKYSLKENDLIKNVPLSQIKNVFKMIDKQEFMAVSGMNR
                     MAYNDQYIVGQRGDEFILYKFGDESMRVYNTEFEMQQDLNELGQNLQLKPENAYQ"
     gene            882..1079
                     /locus_tag="O6Y56_000360"
     CDS             882..1079
                     /locus_tag="O6Y56_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573656.1"
                     /translation="MSILTIILIALLVILLFRVGLSILRFLIYVGLVLLCIYLGYQGL
                     IWLLDFFQINSGFLPHFQFNN"
     gene            complement(1196..1480)
                     /locus_tag="O6Y56_000361"
     CDS             complement(1196..1480)
                     /locus_tag="O6Y56_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573657.1"
                     /translation="MTLFIIIGVLVPMVYTMQLNIKNEPVTKRNLLITLALSTVGILV
                     TALAGVIVTKQAFPLLSVAIGSIFTGIVWGLLLSGSYALIRFLSNAFGRK"
     gene            complement(1548..2234)
                     /gene="radC"
                     /locus_tag="O6Y56_000362"
     CDS             complement(1548..2234)
                     /gene="radC"
                     /locus_tag="O6Y56_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000692885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HDB5573658.1"
                     /translation="MKIKEMVTSEMPRERLLSHGAKSLSNTELLAILINTGRKGFSSI
                     DISNELLKSASNLNELKKSSINDLIQVKGIGLQKAITLKAAFELGERMGRRAENNRIK
                     ITQPSDVADYMIPTMKDLTQEHFVILLLNSKNVVIKESCVFKGTLNSSIVHPREIFSI
                     AVRENANAIIAVHNHPSGDVTPSQEDIITTMRLKECGLILGIDLLDHIIIGDNRFTSL
                     VEAGYFDEND"
     gene            complement(2231..2938)
                     /locus_tag="O6Y56_000363"
     CDS             complement(2231..2938)
                     /locus_tag="O6Y56_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDB5573659.1"
                     /translation="MVVLLSYSCSCIFSFLYQFISIEETSFDYLHRRSKCDYCNSSLK
                     WYELMPIISFLLLKGRCRNCRKRISLTHFLGETFALIPIVFIKYDFTYVNATLFITTY
                     VFLLIFTMTDITSLMLDCRLIIIYCIVSLSLSIIYPVAFIIISMTTHIFYFLFRAYIG
                     YGDVLLISALSLFFPLQFTIYVILFTFVIAGLVALITMIFKPIKLLPLVPFIFISFFI
                     NSLFYNDIHQFLGGVYF"
     gene            complement(3206..4477)
                     /locus_tag="O6Y56_000364"
     CDS             complement(3206..4477)
                     /locus_tag="O6Y56_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDB5573660.1"
                     /translation="MNYLESLYWIHERTKFGIKPGVKRMEWMLAQFNNPQNNIKGIHV
                     GGTNGKGSTVAYLRTALVENGYEVGTFTSPFIETFNERISLNGVPISNDAIVELVSRI
                     KPVSEMMERETDLGVATEFEIITAMMFLYFGEIHPVDFVIVEAGLGIKNDSTNVFTPI
                     LSILTSIGLDHTDILGGTYLDIARDKGAIIKPNVPVIYAVKNEDALKYVRERAIEQHA
                     KPIELDREIVVVSQNDEFTYRYKDYELETIILSMLGEHQKQNAALAITALIELNEQGL
                     IELDFNKMIDGIESVRWTGRIEQVHDKPLIILDGAHNSESIDALIDTIKQYHDKEKVD
                     ILFSAINGKPINEMVKHLSLIAHTFYATEFDFPKALRKEEIVGSIENDEIQLVDDYVE
                     FIKNYQGDTLVITGSLYFISEVKSKLDFEAL"
     gene            complement(4490..7120)
                     /locus_tag="O6Y56_000365"
     CDS             complement(4490..7120)
                     /locus_tag="O6Y56_000365"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDB5573661.1"
                     /translation="MEMKPKYDPREVEAGRYEEWVKNGYFKPSEDKSKETYTIVIPPP
                     NVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAKVEAKLNEQGIT
                     RYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFVD
                     LYNKGIIYRGERIINWDPKARTALSDIEVIHEDVQGAFYHFKYPYADGEGFIEIATTR
                     PETMLGDTAIVVNPNDERYKDVIGKTVILPIVGRELPILADEYVDIDFGSGAMKVTPA
                     HDPNDFEIGQRHQLENIIVMDENGKMNDKAGKYEGMDRFDCRKQLVEDLKEQDLVIKI
                     EDHVHSVGHSERSGAVVEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFN
                     QWMENIRDWTISRQLWWGHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSS
                     ALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVL
                     LHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVES
                     VWNFINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDK
                     YEFGEVGRALYNFIWDDFCDWYIEMSKIPMNGNDEEQKQITRSVLSYTLDNIMRMLHP
                     FMPFVTEKIWQSLPHEGDTIVKALWPEVRESLIFEESKQTMQQLVEIIKSVRQSRVEV
                     NTPLSKEIPILIQAKDKEIETTLSQNKDYLIKFCNPSTLNISTDVEIPEKAMTSVVIA
                     GKVVLPLEGLIDMDKEISRLEKELAKLQSELDRVDKKLSNENFVSKAPEKVINEEKRK
                     KQDYQEKYDGVKARIEQLKA"
     misc_binding    complement(7166..7468)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            7526..8086
                     /locus_tag="O6Y56_000366"
     CDS             7526..8086
                     /locus_tag="O6Y56_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HDB5573662.1"
                     /translation="MNECAFGTKDPVYLDYHDHVWGQPLYDSKALFKLLALESQHAGL
                     SWLTILKKKEAYEEAFYDFEPEKVAQMTAHDIDRLMTFPNIVHHRKKLEAIVNQAQGY
                     LKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPV
                     TVFSFLEAAGLYDAHLKDCPSKPKHN"
     gene            complement(8309..9382)
                     /locus_tag="O6Y56_000367"
     CDS             complement(8309..9382)
                     /locus_tag="O6Y56_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HDB5573663.1"
                     /translation="MTMIYRNNFIVFVLSFFISIILYSSHVLLPFMFGPIIASIICVK
                     VFKLDIKWPFLLSELGIVLLGVQIGSTFTKNVVMDIKDNWLSIIVVSISILLIALVMA
                     FIFKKIARINTETAILSVIPGALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPF
                     ISYFFHDGNMHANGKLTKVLPLSQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAP
                     LIVLIVWNFSTGLTFTLDHWLLNMAQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIM
                     LIIGALIMVYVIHFFDNNPINELFLGAAPGGVNQIVLVALATGADVAMITSYHIFRIF
                     FILFIIAPGINYFLKYRSNKRED"
     gene            complement(9416..9517)
                     /locus_tag="O6Y56_000368"
     CDS             complement(9416..9517)
                     /locus_tag="O6Y56_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573664.1"
                     /translation="MGGDLIVKVHICFVVKTASGYCYLNKREAQAAI"
     gene            complement(9578..10864)
                     /gene="hemL"
                     /locus_tag="O6Y56_000369"
     CDS             complement(9578..10864)
                     /gene="hemL"
                     /locus_tag="O6Y56_000369"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDB5573665.1"
                     /translation="MRYTKSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGS
                     KIYDIDGNEYIDYVLSWGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVI
                     DRVPSIEKVRMVSSGTEATLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVA
                     TLGLPDSPGVPEGIAKNTITVPYNDLDALKIAFEKFGDDIAGVIVEPVAGNMGVVPPI
                     EGFLQGLRDITTEYGALLIFDEVMTGFRVGYHCAQGHFGVTPDLTCLGKVIGGGLPVG
                     AFGGKKEIMDHIAPLGNIYQAGTLSGNPLAMTSGYETLSQLTPETYEYFNMLGDILED
                     GLKRVFAKHNVPITVNRAGSMIGYFLNEGPVTNFEQANKSDLKLFAEMYREMAKEGVF
                     LPPSQFEGTFLSTAHTKEDIEKTIQAFDTALSRIVK"
     gene            complement(10912..11886)
                     /gene="hemB"
                     /locus_tag="O6Y56_000370"
     CDS             complement(10912..11886)
                     /gene="hemB"
                     /locus_tag="O6Y56_000370"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001633925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDB5573666.1"
                     /translation="MKFDRHRRLRSSATMRDMVRENHVRKEDLIYPIFVVEKDDVKKE
                     IKSLPGVYQISLNLLESELKEAYDLGIRAIMFFGVPNSKDDIGTGAYIHDGVIQQATR
                     IAKKMYDDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTAISQVEAGAD
                     IIAPSNMMDGFVAEIRRGLDEAGYYNIPIMSYGVKYASSFFGPFRDAADSAPSFGDRK
                     TYQMDPANRLEALRELESDLKEGCDMMIVKPALSYLDIVRDVKNHTNVPVVAYNVSGE
                     YSMTKAAAQNGWIDEERVVMEQMVSMKRAGADMIITYFAKDICRYLDK"
     gene            complement(11889..12557)
                     /locus_tag="O6Y56_000371"
     CDS             complement(11889..12557)
                     /locus_tag="O6Y56_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDB5573667.1"
                     /translation="MKPVVVMTQTNDMQSDLVSIIHKPFIDIKPLNFDIHLLNQRYDW
                     LIFSSKNAVKFFYKYLKRINVDNIAVIGSKTAQYCESLGIQVDFMPNDFSQEGFLKSF
                     NQTNQKILLPSSELARPLLLAALSKDNEVVKIDLYTSVPNKQNIQDVKEMIEHQQIDA
                     LTFSSSSAVRYYFNEGFVPKFKSYFAIGEQTARTIKSYQQPVTIAEIQTLESLIEKIL
                     ESRG"
     gene            complement(12579..13505)
                     /gene="hemC"
                     /locus_tag="O6Y56_000372"
     CDS             complement(12579..13505)
                     /gene="hemC"
                     /locus_tag="O6Y56_000372"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDB5573668.1"
                     /translation="MRKLVVGSRRSKLALTQSQQFIDKLKAVEPNLEIEIKEIVTKGD
                     RIVDKQLSKVGGKGLFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELP
                     FDAYISKTHTPLSQLPEGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTE
                     DYDAIILAAAGLRRMGWSDDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKV
                     HNDEVAKCVTAERTFLAEMDGSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTM
                     NGTDPVELGKKVSNKLKEQGAYEIIKRLNEQH"
     gene            complement(13547..14362)
                     /gene="ccsA"
                     /locus_tag="O6Y56_000373"
     CDS             complement(13547..14362)
                     /gene="ccsA"
                     /locus_tag="O6Y56_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDB5573669.1"
                     /translation="MQENLFIRFNEIILLIYLISIICYFYDFVQKSHKIRSLGIYLLG
                     IVWVLQTISLSIFIIQTRHIPLGSISDVFYTLSWLIISISLILNLIKVLNFSVFFLNL
                     IGLTLLGMNTFQPTHYTNKVQKIAVVDELLLVHIGLAVLSYVFFALAFVNALLYIMQY
                     RNLKEKRFDQKYFRIGSVATLESIVFYSTLSGWIILIFSIILGTQWGVISVGERIFID
                     PKVILSSIITVLYGSYILLRINKWLNSRYLIYYNIILFCLNMINLFFATHFVN"
     gene            complement(14384..15730)
                     /locus_tag="O6Y56_000374"
     CDS             complement(14384..15730)
                     /locus_tag="O6Y56_000374"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDB5573670.1"
                     /translation="MHFIAISINHRTADVALREQVAFRDDALRIAHEDLYETKSILEN
                     VILSTCNRTEVYAVVDQIHTGRYYIQRFLARAFGFEVDDIKTMSEVKVGDEAVEHLLR
                     VTSGLDSIVLGETQILGQIRDAFFLAQSTGTTGTIFNHLFKQAITFAKRAHNETDIAD
                     NAVSVSYAAVELAKKVFGKLKSKQAIIIGAGEMSELSLLNLLGSGITDITVVNRTIEN
                     AMKLAAKHQVKYDELSSLPNLLESADIVISSTSAQTYIITNEMIERIAENRKQDSLVL
                     IDIAVPRDIEPGISAITNIFNYDVDDLKGLVDANLRERQLAAATISEQIPAEIHAHNE
                     WISMLGVVPVIRALREKAMAIQAETMDSIDRKLPGLSERERKIISKHTKSIINQMLKD
                     PIKQAKELSSDKKSNEKLELFQNIFDIEAECPHEQAKQQKESKVKEISARRIFSFE"
     gene            complement(15947..16537)
                     /locus_tag="O6Y56_000375"
     CDS             complement(15947..16537)
                     /locus_tag="O6Y56_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDB5573671.1"
                     /translation="MKVNPNNIELIISAVKEEQYPETELSEVALSGRSNVGKSTFINS
                     MIGRKNMARTSQQPGKTQTLNFYNIDEQLIFVDVPGYGYAKVSKTQREKFGKMIEEYI
                     TKRENLQLVIQLVDLRHDPTQDDILMYNYLKHFDIPTLVICTKEDKIPKGKVQKHIKN
                     IKTQLDMDPDDTIVSYSSIQNNKQQQIWNLIEPYIS"
     gene            complement(16691..17953)
                     /gene="clpX"
                     /locus_tag="O6Y56_000376"
     CDS             complement(16691..17953)
                     /gene="clpX"
                     /locus_tag="O6Y56_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HDB5573672.1"
                     /translation="MFKFNEDEENLKCSFCGKDQDQVKKLVAGSGVYICNECIELCSE
                     IVEEELAQNTSEAITELPTPKEIMDHLNEYVIGQEKAKKSLAVAVYNHYKRIQQLGPK
                     EDDVELQKSNIALIGPTGSGKTLLAQTLAKTLNVPFAIADATSLTEAGYVGDDVENIL
                     LRLIQAADFDIDKAEKGIIYVDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTTA
                     SVPPQGGRKHPNQEMIQIDTTNILFILGGAFDGIEEVIKRRLGEKVIGFSSNEADKYD
                     EQALLAQIRPEDLQAYGLIPEFIGRVPIVANLETLDVTALKNILTQPKNALVKQYTKM
                     LELDDVDLEFTEEALSAISEKAIERKTGARGLRSIIEESLIDIMFDVPSNENVTKVVI
                     TAQTINEETEPELYDAEGNLINNSKTSA"
     gene            complement(18104..19405)
                     /locus_tag="O6Y56_000377"
     CDS             complement(18104..19405)
                     /locus_tag="O6Y56_000377"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDB5573673.1"
                     /translation="MTATWEKKEGNEGLLTVTVPAEKVNKALDQAFKKVVKQINVPGF
                     RKGKVPRPIFEQRFGVEALYQDAIDILLPDAYGEAIDETDIKPVAQPEVSVTQIEKGK
                     DFIFEATVTVEPEVKLGDYKGLEIEKQETELSDDELQEAIDHSLGHLAEMVVKEDGVV
                     ENGDTVNIDFSGSVDGEEFEGGQAEGYDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVT
                     FPEEYHAEELAGKEATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRL
                     AEQKATDAENVEKEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQGLDLQTY
                     FQISGQDESQLREQMKDDAEQRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNI
                     SVEDIKNTLGNTDIIKNDVRIQKVIDLLRDNAKFVEGTKED"
     gene            complement(19453..19563)
                     /locus_tag="O6Y56_000378"
     CDS             complement(19453..19563)
                     /locus_tag="O6Y56_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573674.1"
                     /translation="MQNNTQHFNIVLTKKVDLQIYKRCDFNVCIGNRPMI"
     gene            complement(19568..20497)
                     /locus_tag="O6Y56_000379"
     CDS             complement(19568..20497)
                     /locus_tag="O6Y56_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573675.1"
                     /translation="MSDIIQFPNSSKKLYKDIKRAEQDRNYDLMYEYIVQYERQFELT
                     EEIAMMKCRMLYETGSFLELREETIVLLKTGIQQYDALMIYYVKSLIGLGQYFEAVEV
                     IHQIIDEVKDHKTRMALHPLKEFAKSKLIEDEKRLTQSLTDFDMLSMREQTHLILKLI
                     DNGHFQFQETVLYILKSNTYSYNLISLMIEYLRFAKCTQELTIEKYGMDVTFVPANLK
                     GLEHTTLKEKVIPNVMETLNDGALHIAEEAHHIMNNHSIMIYPIDIETLFETNKWINA
                     YECYFKNMLGLKCELQSIDAFNFIQQLDLNNNS"
     gene            complement(20516..21124)
                     /locus_tag="O6Y56_000380"
     CDS             complement(20516..21124)
                     /locus_tag="O6Y56_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDB5573676.1"
                     /translation="MSKFDEQIIVVPREIIFNNEKNTFNGFLNKNKPEGQNIFDALSQ
                     YEVKRRGDMEEDPSYKQLISYCLLENEHGEILVYERLSGGGEARLHGQSSIGVGGHMN
                     DVPGAESINEVLRVNAQRELEEEVGLSEQDSQNMEYIGFINDDNNEVGKVHIGVVFKI
                     TVSTNDVEAKETDTLRIKWVEKGNIESYDDFETWSALILQDL"
     gene            complement(21268..21624)
                     /gene="rplT"
                     /locus_tag="O6Y56_000381"
     CDS             complement(21268..21624)
                     /gene="rplT"
                     /locus_tag="O6Y56_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDB5573677.1"
                     /translation="MPRVKGGTVTRARRKKTIKLAKGYFGSKHTLYKVAKQQVMKSGQ
                     YAFRDRRQRKRDFRKLWITRINAAARQHEMSYSRLMNGLKKAGIDINRKMLSEIAISD
                     EKAFAQLVTKAKDALK"
     gene            complement(21671..21871)
                     /gene="rpmI"
                     /locus_tag="O6Y56_000382"
     CDS             complement(21671..21871)
                     /gene="rpmI"
                     /locus_tag="O6Y56_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDB5573678.1"
                     /translation="MPKMKTHRGAAKRVKRTASGQLKRSRAFTSHLFANKSTKQKRQL
                     RKARLVSKSDMKRVKQLLAYKK"
     gene            complement(21900..22427)
                     /gene="infC"
                     /locus_tag="O6Y56_000383"
     CDS             complement(21900..22427)
                     /gene="infC"
                     /locus_tag="O6Y56_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDB5573679.1"
                     /translation="MSTIAKDQTQINDKIRAKELRLIGQDGEQIGVKSKREALEMAER
                     VDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTIEEHD
                     FQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKPKM
                     DGRQMFIMLAPTAEK"
     misc_feature    complement(22456..22581)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00558"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L20 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00558"
     gene            complement(22655..24148)
                     /locus_tag="O6Y56_000384"
     CDS             complement(22655..24148)
                     /locus_tag="O6Y56_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDB5573680.1"
                     /translation="MSKVRNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHD
                     AGALGALIGYAIIGIMVFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYW
                     FNWVVTVAADITIAAQVIQYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWL
                     ALIKVVTVIVFIAIGLLTIVGIMGGHFVGFEIFNKGEGPILGGNLGGSLLSILGVFLI
                     AGFSFQGTELIGITAGESENPERAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSAL
                     MGGGNDVATSPFTLVFKNAGFAFAASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDK
                     LAFETFGKTNKNGVPYMSLLVTAIIVVIIFVVQSVTEGAYQYIVAASGLTGFIAWVGI
                     AVSHYRFRRAFDKQNYDKSKLKYTAKLFPFGPIFAAILCIVVIIGQDVDFIKTGDFNF
                     SRFLITYMGIPVFLAFFIYHKLRYKTKKIPLEQVDLRQDVSMDEIKG"
     gene            complement(24575..26512)
                     /gene="thrS"
                     /locus_tag="O6Y56_000385"
     CDS             complement(24575..26512)
                     /gene="thrS"
                     /locus_tag="O6Y56_000385"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDB5573681.1"
                     /translation="MEQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNG
                     QLVDLTKPLETDGSIEIVTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEG
                     GFYYDFDIDQNISSDDFEQIEKTMKQIVNENMKIERKVVSRDEAKELFSNDEYKLELI
                     DAIPEDENVTLYSQGDFTDLCRGVHVPSTAKIKEFKLLSTAGAYWRGDSNNKMLQRIY
                     GTAFFDKKELKAHLQMLEERKERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRRE
                     IERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPM
                     NCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRP
                     DQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEA
                     ADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDG
                     EHHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQ
                     DELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQE
                     TVEKDEFIWNLVDEIRLKKHR"
     gene            complement(26709..26831)
                     /locus_tag="O6Y56_000386"
     CDS             complement(26709..26831)
                     /locus_tag="O6Y56_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573682.1"
                     /translation="MFDENMVNKLDDYYFIYGICNEYPAQDRYLKQRYLIYNLY"
     gene            complement(26924..27844)
                     /gene="dnaI"
                     /locus_tag="O6Y56_000387"
     CDS             complement(26924..27844)
                     /gene="dnaI"
                     /locus_tag="O6Y56_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaI"
                     /protein_id="HDB5573683.1"
                     /translation="MKQFKSIINTSQDFEKRIEKIKKEVINDPDVKQFLEAHRAELTN
                     AMIDEDLNVLQEYKDQQKHYDGHKFADCPNFVKGHVPELYVDNNRIKIRYLQCPCKIK
                     YDEERFEAELITSHHMQRDTLNAKLKDIYMNHRDRLDVAMAADDICTAITNGEQVKGL
                     YLYGPFGTGKSFILGAIANQLKSKKVRSTIIYLPEFIRTLKGGFKDGSFEKKLHRVRE
                     ANILMLDDIGAEEVTPWVRDEVIGPLLHYRMVHELPTFFSSNFDYSELEHHLAMTRDG
                     EEKTKAARIIERVKSLSTPYFLSGENFRNN"
     gene            complement(27844..29244)
                     /locus_tag="O6Y56_000388"
     CDS             complement(27844..29244)
                     /locus_tag="O6Y56_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation and membrane attachment
                     family protein"
                     /protein_id="HDB5573684.1"
                     /translation="MGRQAFEFGLRPKDQFKVMQHFDLNTNHLEVLNRLYTPLIGAQA
                     VGLYHFMTQFVKESHNETLILSHYIFMNELKINLLEFRQQMDLLEAIGLLKAFVKHDE
                     QETQFVYQLIQPPSAHLFFNDPMLSIFLYSEVEHRRFHELKKYFEYQQIDLSEFKQVT
                     RQFTDVFKVPSTKIDIDTSDIPINEPYQGIDLSNESFDFEMLRQMLGKHFISQDIVTK
                     DAKRLITQLATLYGLTADGMKHVILNSITSGQQLSFEEMRKQARSYYLMEHENQMPKL
                     QVKSPATSSSTAKSSEVNPKPQSDEWFELLEQTSPIDMLASWSESEPTISQKTMVEEL
                     IEREKMSFGVINILLQFVMLKEDMKLPKAYILEIASNWKKKGIKTAKEAYNYAKKVNQ
                     SKNEGSSGNYQKRGSYYGQRNRISKEKTPKWLENRDKPSEEDSAKDNSVDDQQLEQDR
                     QAFLDKLSKKWEEDSQ"
     gene            complement(29245..29715)
                     /gene="nrdR"
                     /locus_tag="O6Y56_000389"
     CDS             complement(29245..29715)
                     /gene="nrdR"
                     /locus_tag="O6Y56_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HDB5573685.1"
                     /translation="MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHI
                     EVSQLIVVKKDGTREQFSREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDEGHTE
                     VSSRDIGEHVMNLLMHVDQVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA"
     gene            complement(29925..30950)
                     /gene="gap"
                     /locus_tag="O6Y56_000390"
     CDS             complement(29925..30950)
                     /gene="gap"
                     /locus_tag="O6Y56_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDB5573686.1"
                     /translation="MSTNIAINGMGRIGRMVLRIALQNKNLNVVAINASYPPETIAHL
                     INYDTTHGKYNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNH
                     GDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDDQLDIEAFDIFSNASCTTNCIGP
                     VAKVLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALK
                     EVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAGLEGIIEVEHQ
                     PLVSVDFNTNPHSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAEQIGALLTS
                     KETVSAS"
     gene            complement(31120..31743)
                     /locus_tag="O6Y56_000391"
     CDS             complement(31120..31743)
                     /locus_tag="O6Y56_000391"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDB5573687.1"
                     /translation="MPKVIGLTGGIASGKSTVSELLSVFGFKVVDADKAAREAVKKGS
                     KGLAQVREVFGDEAIDENGEMNRRYMGDLVFNHPEKRLELNAIIHPIVRDIMEEEKQE
                     YLKQGYNVIMDIPLLFENELENTVDEVWVVYTSESIQMDRLMQRNNLSLEDAKARVYS
                     QISIDKKSRMADHVIDNLGDKLELKQNLERLLEEEGYIEKPNYGEED"
     gene            complement(31759..32631)
                     /gene="mutM"
                     /locus_tag="O6Y56_000392"
     CDS             complement(31759..32631)
                     /gene="mutM"
                     /locus_tag="O6Y56_000392"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HDB5573688.1"
                     /translation="MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETII
                     KGIELDTFKTLSEGYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVNELED
                     IMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEAL
                     TYYLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQ
                     EMVFYYVREVLEEGIKFGGTSISDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKI
                     IATRNSHYCPVCQK"
     gene            complement(32647..35277)
                     /gene="polA"
                     /locus_tag="O6Y56_000393"
     CDS             complement(32647..35277)
                     /gene="polA"
                     /locus_tag="O6Y56_000393"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDB5573689.1"
                     /translation="MNKLVLIDGNSLSFRAFYALPLLSNKAGIHTNAVYGFAMLLEKI
                     LKEEKPNHFLVAFDAGKTTFRHEKYSEYKGGRQKTPPELSEQFPYIRQLLDAYHIKRY
                     ELDNYEADDIIGTLSKEADKAGFQTIIITGDRDLTQLATDNVTIYYTKKGVTDVDHYT
                     PDFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQFDSVEGVYEHL
                     DEISGKKLKEKLQNSKEDALMSKELATINVDSPIEVKLEDTLMTHQDEQQEKIELFKK
                     LEFKQLLADIDQSASVEDAIEKTFEIETSFDNVDFTSLKEAAIHFELEGGNYLRNNIL
                     KFSLFTGEKHIVINADDINNYAELVSWLENPNTKKVVYDAKKTYVASHRLGIDIQNIS
                     FDIMLASYIIDPSRTISDVQSVVSLYGQSFVKDDVSIYGKGKKFKVPEDDVLNPYVAS
                     ITDAIYFVKPNMDKQLEEYNQVELLADLELPLAKILSEMEEIGIYTDVHDLEEMEKEI
                     QEKLDVLIRNIHDAAGEDFNINSPKQLGVVLFETLQLPVIKKTKTGYSTAVDVLEQLQ
                     GEHPIIDYILEYRQLSKLQSTYVEGLQKVISDDQRIHTRFNQTLAQTGRLSSVDPNLQ
                     NIPVRLEEGRKIRKAFKPTSKDSVILSADYSQIELRVLAHITQDESMKEAFINGDDIH
                     TATAMKVFGVEADQVDSLMRRQAKAVNFGIVYGISDYGLSQSLGITRKKAKAFIDDYL
                     ASFPGVKQYMSDIVKDAKALGYVETLLHRRRYIPDITSRNFNLRGFAERTAMNTPIQG
                     SAADIIKLAMVKFAQKMKETTYQAKLLLQVHDELIFEVPKSEVDSFSEFVEEIMENAL
                     QLDVPLKVDSSYGATWYDAK"
     gene            complement(35570..37057)
                     /locus_tag="O6Y56_000394"
     CDS             complement(35570..37057)
                     /locus_tag="O6Y56_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573690.1"
                     /translation="MKTIQLHKTTLILIAILLFYTFMGILLPLMHDDLQWFSNYNTDI
                     LKVGFASLNGRYIGNIFEIIAVHVSWLRWLSYGLISMGIIWMIMHITRCKAWTSYYLL
                     AFSLMLILPSAIYADTFGWFAGFYNYATSTLISLFIIYYCINAIIYKEKQPVSVTVLF
                     YVLCFFGQLFMENVTLFHCIILILAFLYEFTANRTLNYKLLFSFMIATIGTIIMFSNP
                     NYRKILFEGSEYQQVSNNQGIFSKFAEMISTSLPYGVIFSQVIILSMIAALIIYLLLR
                     SDRYVHLTILKRRIIMIGFITLPLYYLLFYNQFLLNKNTDIGLVGFANVIVCGYFAFS
                     IFVGIYLSINDRKTQITLYSLLIAICVSASTLVIVTPIEPGNFLIVYTIHVIILIILL
                     KEFRKYKSINVNFIKGASLVLAMIYLSAFIYVHYEHEKRVQLLKQQIKDHPRQEVYTV
                     ESLPFEHYMHHPSPINKNYQEWFNNYEELPKMTKVKYIPFGSDDS"
BASE COUNT        11818 a         7042 c         5062 g        13469 t
ORIGIN      
        1 tactagcaaa cattccagtc actagtagtt taaataatcg atttaaattt taaaattatc
       61 tgtttgtatc gttcgaggat tcactgttcg aattctgaag ttgtctccaa cgtgcgaata
      121 agttctgggc cttttgttgt tcattagctt gtttctgttt tgattgttct gccatttgaa
      181 ctacaccaac cttttaaatt tattctagtg gcaggataac taaaatatat ttcttatgca
      241 ataatttcct attgataagc attttcaggt tttagttgta aattttgccc taattcattt
      301 aagtcttgtt gcatttcaaa ttcagtattg taaacacgca ttgactcatc tccaaattta
      361 taaagaataa attcgtctcc tctttgacct acaatatatt gatcattata agccatgcga
      421 ttcattccag acacagccat aaactcttgt ttatctatca ttttaaatac atttttaatt
      481 tggcttaatg gtacattctt tattaaatca ttttctttta atgaatattt ctcaccactt
      541 acataaacat gttgggcatc attagtgggt tgcgtaactt gattcgtttg atcattatcg
      601 tgatttacag gattccaatc ttgttctttt aaaaaaggtg cgtatttcaa ggcgatataa
      661 acaattatca caattgctat tactgctata atgtttttaa tcatactaaa tatcaatctc
      721 atagttcgcc tccaatgtct tcatctaatt atatatttta ttatgtatat tttcctcagt
      781 cttcagcctt aatcatgata tatcttagga ctgatgcacg ttcatttaaa atagcttata
      841 attttgttat gatttaaaag cgtatgagga ggtttgtagc attgagtata ctaacaatta
      901 ttttaatagc actattagtc atcctccttt ttagagttgg actttctatt ttgcgatttt
      961 taatttatgt cggacttgtt ttattatgta tttacttagg atatcaaggt ttaatatggt
     1021 tgctcgattt ttttcaaata aatagtgggt ttttaccaca ctttcaattt aacaattaaa
     1081 tttattctgc ataacaaaac tcctaatgta ctagtttaga attttttaac tagttccaca
     1141 ttaggagttt taatttgttt tcaaacacgg atactacttg atgaacagat tactattact
     1201 tacgcccaaa tgcgttagat aaaaatcgta tcagcgcgta gctaccactt agtaaaaggc
     1261 cccaaacgat tccagtaaaa attgagccta ttgctacact taataaagga aaagcttgtt
     1321 tcgtaacgat cacacctgct aacgccgtta ctaaaatacc taccgtagat aaagctaatg
     1381 ttattaatag attgcgcttt gttacaggtt catttttaat atttaactgc atggtataaa
     1441 ccataggcac gagaaccccg ataataataa atagagtcac tatttttcct ccaatgaaag
     1501 tacttcgtag gtattataca caagatacgt cattaattct atcaacttca atcattttca
     1561 tcaaagtaac ccgcttctac aagactcgta aatctattat caccgattat aatatgatcc
     1621 aataaatcta tccctaaaat caaaccacac tccttcaacc tcattgttgt tatgatatct
     1681 tcttgtgagg gcgttacatc accggatgga tgattatgaa ctgcgatgat tgcattggca
     1741 ttttctctca ccgcaatact aaaaatttcg cgtggatgta caattgaact atttaatgta
     1801 cctttaaaaa cacagctttc tttaatcact acattttttg aatttaacaa taaaatgaca
     1861 aaatgttctt gtgttaaatc tttcattgtt ggaatcatat aatcagcaac atcacttggt
     1921 tgcgttattt ttatacgatt attttcagct cttctcccca tcctttcccc taactcaaat
     1981 gctgctttta atgtaattgc tttttgtaat ccaatccctt taacttgtat caaatcgtta
     2041 attgaagatt ttttcaattc attcagattc gaagcagatt taagcagttc attactaatg
     2101 tctatactcg agaatccttt tcttccggtg ttaattaata tagctaataa ttctgtattc
     2161 gaaagacttt ttgcaccatg gcttaacaaa cgttctcttg gcatttctga agttaccatt
     2221 tctttaattt tcaaaaatat acgcctccta aaaattgatg gatatcatta taaaaaagtg
     2281 aattgataaa aaaggaaata aatataaatg gaacaagggg taatagtttt atcggcttaa
     2341 atatcatggt aattaaagca actaaaccag caatgacaaa tgtaaataaa atgacataaa
     2401 tagtgaattg gagagggaaa aacaaagaaa gtgcagatat tagtaaaacg tcaccataac
     2461 caatatatgc ccgaaataaa aagtagaata tatgcgtggt catactaata atgataaaag
     2521 ctactggata aataatactt aacgagagag aaacaataca ataaattata attaagcgac
     2581 aatctaacat taaagacgtg atatcggtca tagtaaaaat aagcagaaaa acatatgtag
     2641 ttataaatag cgtagcattt acgtatgtga aatcatactt aataaagacg atagggatta
     2701 aagcaaaggt ttcccctaag aaatgtgtta gggaaatacg cttacgacag tttcgacatc
     2761 gcccttttaa taataaaaaa ctaataatcg gcattaattc ataccatttg agtgatgaat
     2821 tacaataatc acatttcgat cttctatgta aataatcaaa tgacgtttct tctatagata
     2881 taaattgata tagaaaacta aagatacaac tgcaactata agataacaat actaccaaat
     2941 gacaacctcc ttacgtaaag tatagttagt cattaccaaa atgtaaatat acactatttt
     3001 ccaagaattg cccctctttt tcatttaaat ttttcaatat tgctaagcat aattgatgga
     3061 tactttaata acccatttct gctcgtcaaa attaataatg gcaagaaatt gaaccttata
     3121 aacacatacg atttagagca taaaaaataa ccatgaagct acctattaat taaatagatt
     3181 cttcacggct attttagttt tagttttata atgcttcgaa gtctaatttt gatttaactt
     3241 cacttatgaa gtacagacta ccggtaatta ctaatgtatc accttgataa ttttttataa
     3301 attcaacgta gtcatctact aattgtattt catcattttc aatactacct acaatttctt
     3361 ctttgcgtaa cgctttcgga aaatcaaatt cagttgcata aaacgtatgc gcaattaaac
     3421 ttaaatgttt gaccatctcg ttaatcggtt ttccgtttat tgctgagaac aaaatatcta
     3481 ctttttcttt atcatggtac tgtttaattg tatcaattag agcatctata ctctctgaat
     3541 tatgtgcgcc atccaaaatg attaaaggtt tgtcatgcac ctgctcaata cgtccagtcc
     3601 aacgaactga ttcaataccg tctatcatct tattgaaatc taattcaatt aatccttgtt
     3661 catttaattc aataagagct gttatggcta atgcagcatt ttgtttctga tgttcaccta
     3721 acatacttaa aatgattgtt tctaattcat aatctttata acggtaagta aattcatcat
     3781 tttgcgatac aacaacaatt tctctatcta attcaattgg ctttgcatgt tgttcaattg
     3841 cgcgttcacg aacatacttt aatgcatctt catttttaac agcatatatc actggaacgt
     3901 taggctttat aatcgcgcct ttatccctag caatatctag ataagtacca cctaaaatat
     3961 ctgtatggtc tagaccgata ctagttaaga ttgataaaat cggtgtaaag acatttgtcg
     4021 aatcgttctt tatacccaat ccagcctcaa caatgacaaa atcaacagga tgtatttcac
     4081 caaaatataa aaacatcatc gctgtgatta tttcgaattc agttgcaaca cctaaatctg
     4141 tttcacgttc catcatttca ctaactggtt taatacgtga tactaattct acaatagcgt
     4201 catttgatat tggcacacca tttagactaa ttcgttcatt aaatgtttca ataaacggcg
     4261 acgtaaatgt acctacttca taaccatttt caactaaagc tgttctaagg taagcaactg
     4321 tagagccttt accatttgtg ccacctacat gaataccctt aatgttattt tgaggattat
     4381 taaattgtgc tagcatccat tccatacgtt taacacctgg tttgatgcca aatttagttc
     4441 tttcgtgtat ccaatacaag ctctctaggt aattcattgt tactaactcc tatgctttta
     4501 attgttcaat tcttgccttc acaccatcat atttttcttg ataatcttgt tttttacgtt
     4561 tttcttcatt tataaccttt tcaggcgctt tacttacaaa gttttcatta gagagctttt
     4621 tatctactct atctaattcg ctttgaagtt tagctaattc tttttccaaa cggctgattt
     4681 ccttatccat atcaattagc ccttctaatg gtaataccac tttacctgca attacaactg
     4741 atgtcattgc tttctcagga atttccacgt cagtgctaat atttaacgta ctaggattac
     4801 agaatttgat taaataatct ttgttttgtg ataaagttgt ttcgatttct ttatctttag
     4861 cttgaattaa aataggtatt tctttagaca atggcgtatt tacttctaca cgtgattgtc
     4921 ttacagattt aatgatttca acaagttgtt gcattgtttg tttactttct tcaaaaatca
     4981 atgattcacg cacttctggc cataaagctt taacaattgt gtcaccttca tgtggtaaac
     5041 tttgccatat tttctctgtt acaaatggca tgaatggatg tagcattctc ataatattgt
     5101 ctaaagtata actcaatact gaacgtgtaa tttgtttttg ttcttcatca ttaccattca
     5161 ttggaatttt actcatttca atgtaccaat cacagaaatc atcccaaatg aaattatata
     5221 atgcacgtcc aacttcgcca aattcatatt tgtcacttag atcagtaact gttgcaatcg
     5281 tttcatttaa acgtgttaga atccatttat ctgctaatga taagttacca cttaaatcga
     5341 tatcttcaac tttaaagtct tcaccgatat tcattaaact gaaacgtgcc ccattccaga
     5401 ttttattgat aaagttccat actgactcaa ctttttcagt tgagtatctt aaatcatgtc
     5461 ctggagatga acccgttgct aagaagtaac gcaagctatc agcaccgtat tcgtcaataa
     5521 catccattgg atccacacca ttacctaatg atttactcat cttacgcccg tcttcagcac
     5581 gaactaagcc gtgtaataac acatcattaa atggacgacg atctgtaaat tctaagcctt
     5641 ggaatatcat gcgtgctacc cagaaaaaga taatatcgta acctgtaact aaggcatttg
     5701 ttgggtagta tcgtttaaag tcttcacttt ctaaatcagg ccaacctaac gtagagaaag
     5761 gccataaagc acttgagaac cacgtatcta atacatcttc atcttgttgc caattttcaa
     5821 tatcagttgg cgcttcttct ccaacatata tttcgcctgt ttctttatga taccaagctg
     5881 gaatttgatg accccaccat aattgtcttg aaatcgtcca atctctaata ttttccatcc
     5941 attggttaaa tgtatgttcg aaacgttgtg gataaaaatc aatacgatca tctgtttttt
     6001 ggttatctaa tgaacgtttc gctaagtctt ccatgcgcac aaaccattgc gttgataaat
     6061 atggttcaac aacagcgcca gatcgttctg aatgacctac agaatgaaca tgatcttcaa
     6121 tcttgataac taaatcttgt tcttttaaat cttcaactag ctgtttacga caatcaaaac
     6181 ggtccatacc ttcgtattta ccagctttgt cgttcatttt accattttca tccataacga
     6241 taatattttc taattgatgt ctttgaccaa tttcaaaatc attagggtca tgtgctggtg
     6301 tcactttcat agcaccagaa ccgaagtcta tatcaacata ctcatctgct aaaataggca
     6361 gttcgcgtcc tacgattggt aatataacag ttttaccgat tacatctttg tatcgttcgt
     6421 cattagggtt aacaacaatc gctgtatcac ctaacatcgt ttctggtctt gttgttgcaa
     6481 tttcaataaa accttcacca tcagcgtaag gatatttaaa atgataaaac gcaccttgaa
     6541 catcttcatg tattacttca atatcagata aagctgtacg tgctttagga tcccaattta
     6601 taatacgttc gccacgataa ataattcctt tattgtacag atcaacaaaa acttttttaa
     6661 ctgctttact taaaccttca tctaaagtaa aacgttctct actataatct aaacctagac
     6721 ctaatttagc ccattgcgca cgaataaatg acgcatactc ttctttccaa tcccatgcct
     6781 gttctaaaaa cttttcacga ccaagatcat atctagttat tccttgttca tttaatttag
     6841 cttctacctt tgcctgtgtt gcaataccag catgatccat acctggtaag tataacgtat
     6901 cgtatccttg catacgtttc atacgtgtaa tgatatcttg taaagttgta tcccatgcat
     6961 gtcctaaatg taatttacca gttacatttg gtggcgggat aacaattgta tatgtttctt
     7021 ttgatttatc ttctgacggt ttaaaataac cattctttac ccattcttca taacgtcccg
     7081 cttcaacttc acgaggatca tattttggtt tcatttccat ttgctatacc tcctaaaaaa
     7141 aataaaaaat atccatccta tatacaaata ggacggatat tccgtggtac cacctatatt
     7201 caagaaggat gattaatatc aaattcactc ttttaacata attggaataa tcataccaat
     7261 actatcatcg tgaaatttga aatgcttcat ctcttcaagc actctagatt atgattaacg
     7321 ctcaaacacg tcttagccta ctatataatc acgttcagct aagatactct gtgggctacc
     7381 ttcagtaaaa atcatttaca tactcacacc aaatcatatg ctctctttaa aataatttga
     7441 acttactctt cccaaatcct atattaaact cttaacttat agtataatga ttgacaaaat
     7501 aagtcaatgt ataggtggga ataaaatgaa tgaatgcgca tttggaacta aagatccagt
     7561 ctatttagac tatcatgatc atgtatgggg acaaccgctc tatgatagca aggcattgtt
     7621 taaactttta gcattagaat cacaacatgc tgggctatct tggttaacta ttttaaaaaa
     7681 gaaagaagcc tatgaagaag cattttatga tttcgaacca gaaaaggtag cacaaatgac
     7741 cgctcatgat atcgaccgct taatgacttt tccaaatatc gttcatcatc gtaaaaaatt
     7801 agaagcaatt gttaatcaag ctcaagggta tttaaaaatt gaacaagctt atggtagttt
     7861 tagtaaattt ttatggtctt atgtaaatgg taagcctaaa gatttacagt atgaacatgc
     7921 ttctgatcgt atcacagttg atgatactgc aacacaacta tctaaagatt taaaacaata
     7981 cgggtttaaa tttttaggtc cagtaacagt attttcgttt ttagaagcag ccggtttata
     8041 tgatgcacat ttaaaagatt gtccatcaaa acctaaacac aattaatttg ctatagcatc
     8101 ataaagcaaa cgagacatca tctattttta actaatagac tgtctcgttt tttaatgtag
     8161 aaattgattc aaatcacaag ttaaagttcc atgttaatgc actgctaata ttagatatct
     8221 taatctaaaa atagatgtac aacctttgct taaaccttaa taatgaattc tatcctaagc
     8281 ataatttaac ttaaatggat gatagtttct aatcttcacg cttattcgaa cgatatttta
     8341 aaaagtaatt aattcctggt gcaataataa ataggatgaa aaagattcgg aaaatatgat
     8401 aactcgtaat catagcaaca tcggcaccag tagctaatgc aactaaaact atctgattaa
     8461 cccctcctgg tgctgcacca agaaacaatt catttatagg attattatca aagaaatgta
     8521 tgacataaac catgattagc gcaccaatta tcaacataat attttgaatt gtaattgcga
     8581 ttgctagtct accttttaaa tctgacaata aatgcgcaat ttgaactcca attctaatca
     8641 tatatattag ttgtgccatg ttcaacaacc aatgatctag tgtaaatgtt aaacctgtag
     8701 aaaaattcca aacaattaat acaatgagtg gtgctaataa ttgaaatgtt ggaaacttta
     8761 ttttagacat aattagataa actataaaga tagctatcgc taaaataact atttgcccta
     8821 tgtttaatac ttgtgataaa ggcaagactt ttgttaactt accattcgca tgcatgttac
     8881 catcatgaaa aaaatatgaa atgaacggta ctaaaacaac aacaaatata attcgtgatg
     8941 tttgcgttaa gctaactact aacaaattag cacgtttgtc ttgttcagcc atgaccagca
     9001 tttgtgttag tgctcctggt ataacactta aaatagctgt ttctgtatta atacgtgcaa
     9061 tttttttgaa aataaatgcc attactaatg caattaataa tatcgaaata gatacaacaa
     9121 taatcgaaag ccaattgtct ttaatatcca taacgacatt tttcgtaaac gttgatccga
     9181 tttgcacccc taatagtaca atccctaatt cactaagtaa gaatggccat ttaatatcaa
     9241 gtttgaaaac tttcacacaa atgattgatg cgataatagg accaaacata aatgggagta
     9301 atacgtgcga tgaatacaat ataatactaa taaaaaatga taaaacgaac acaatgaaat
     9361 tatttctata tatcattgtc atgttttcca cttctttcaa taaaaaataa aatgactaaa
     9421 ttgctgcttg agcttcacgt ttgttaagat aacaatatcc gctagcagtt ttgactacaa
     9481 agcatatatg gactttcact atcaagtcgc cgcccatgcc tgatatacat ttaaaaagag
     9541 cctgaacaaa gttcaggctc tcaatttgtc cgtatattta ttttacaata cgacttaaag
     9601 ccgtatcaaa tgcttgaatc gttttttcaa tatcttcttt cgtgtgtgcc gtagataaga
     9661 atgtaccttc aaattgagat ggtggtaaaa atacaccttc ttttgccatt tcacgataca
     9721 tttctgcaaa taatttcaaa tcacttttat tcgcttgttc aaaattagtt acaggtcctt
     9781 catttaagaa ataaccaatc attgaacctg ctctatttac agttattggt acattgtgtt
     9841 tagcaaatac acgctttaaa ccgtcttcaa gtatatcgcc taacatatta aaatactcat
     9901 atgtctctgg cgttaattga cttaacgttt cataaccact tgtcattgca agaggattcc
     9961 ctgataacgt acccgcttga tagatatttc ctaatggtgc tatatgatcc atgatttctt
    10021 ttttaccacc aaaagcacct actggtagtc ctccaccgat aacttttcct aagcaagtta
    10081 aatctggtgt cacaccaaag tgaccttgtg cacaatgata accgactctg aaaccagtca
    10141 ttacttcatc gaaaattagc aatgcgccgt attctgtcgt aatatctctt aatccctgta
    10201 aaaaaccttc aatcggcggt acgacaccca tattaccagc aacaggttct acgattacac
    10261 cagcaatatc atctccaaat ttttcgaaag cgattttaag tgcatctaaa tcattgtatg
    10321 gaactgtaat tgtattttta gcaatacctt caggcacacc aggagaatcc ggcaatccta
    10381 atgttgccac cccagaccca gctttgatta ataacgaatc actatgacca tgatagcaac
    10441 cttcaaattt cacaatttta tttctgccag tataaccacg tgctaatctt aaagtatcca
    10501 atgtagcttc tgtaccagat gacaccatac gcactttttc tattgaaggt actcggtcaa
    10561 ttacgagctg cgccaattta ttttcaagta atgttgatgc accaaaactt gtacctttat
    10621 caattgcttc atgtaaatga ctaataactt gagggtctct atgtcctaaa ataagcggcc
    10681 cccaacttag tacatagtcg atatactcgt taccatcgat atcataaatt tttgagcctt
    10741 taccgtggtc cataaaaatt gctggtgtat ctactgattt aaatgcgcgt actggactat
    10801 ttacaccacc tggcattaaa gtttcagcaa ccttcattgc ttcttctgac ttcgtatatc
    10861 tcataaagta aattcctcct atagtttatg gaaaatcata catataaaac cttatttatc
    10921 taaatagcga caaatgtcct ttgcaaaata agtaataatc atatcagcac ctgcacgttt
    10981 cattgaaacc atttgttcca taacgacacg ttcttcatct atccaaccat tttgtgccgc
    11041 tgctttagtc atactatatt ctccactcac attatatgca acaactggaa cattcgtatg
    11101 atttttaaca tctcgaacta tgtctaaata acttagagca ggtttaacaa tcatcatgtc
    11161 gcacccttct ttaagatcac tttctaattc acgaagtgct tccaaacggt tagcagggtc
    11221 catctgatac gtttttctat caccaaatga tggcgctgaa tctgctgcat ctctaaaagg
    11281 tccaaagaaa ctagatgcat acttgacacc ataactcatt attggaatat tgtaatagcc
    11341 ggcttcatca agtccacgac gaatttcagc aacaaaacca tccatcatat tacttggtgc
    11401 aataatatca gctccagctt ccacttgaga aattgctgtt ttaacaagta gtggtaatga
    11461 tttatcattg tcaacgtcat gtgtatggtc atcaatcaca ccacaatgac catgatcagt
    11521 atattcacac aaacaagtgt ctgcaacaat taataagtca tcatacattt ttttagcaat
    11581 acgtgttgcc tgttgaataa caccatcgtg aatgtatgca ccagtaccta tatcatcttt
    11641 tgagtttgga acaccaaaaa acataatggc acgtatacct aagtcataag cttcttttaa
    11701 ttcactttca agtaaattca aactgatttg gtatacacct ggcaatgact taatttcttt
    11761 tttcacatcg tctttttcaa ctacaaaaat tggatatatt aaatcttctt ttcttacatg
    11821 attctctcta accatatctc tcattgtcgc tgatgatctc aatcttctat gtctatcaaa
    11881 tttcattttt agcccctact ttctaaaatc ttttcaatta gtgattcaag tgtttgaatt
    11941 tctgcaattg ttactggttg ttgatatgat ttaatggtcc gtgctgtttg ttctccaata
    12001 gcaaaatacg acttgaattt tggtacaaat ccttcattaa aataataacg tactgccgac
    12061 gaacttgaaa atgttaatgc atcgatttgt tgatgttcta tcatttcttt aacatcctgt
    12121 atattttgtt tgttaggcac tgaagtatat aaatctattt taacaacttc attatcttta
    12181 gataacgctg ctaataataa tggtctcgcc aattcactcg aaggcaaaag tattttttgg
    12241 ttagtttgat taaatgattt taaaaatcct tcttgagaaa agtcgtttgg cataaaatca
    12301 acttgaatgc caagtgattc acaatattgc gctgtcttac ttcctatcac agcaatgtta
    12361 tcaacattaa ttctttttag atatttataa aagaatttca cagcattttt agatgaaaaa
    12421 ataagccagt catagcgttg atttaacaaa tgaatatcaa aatttagtgg ctttatatca
    12481 ataaagggtt tgtgaataat tgatactaaa tcactttgca tgtcatttgt ttgtgtcata
    12541 actacaactg gcttcatatt taaacgtcac tccattattt aatgttgttc atttaagcgt
    12601 tttataattt cataagcacc ttgctctttt aatttgttac tcactttttt gcctaactca
    12661 accggatctg ttccgttcat tgtatattca aatcgttctt taccatctgg ggtcataatt
    12721 aaacctgtaa attcgatttc tttttgatct gagattgtag catatcctgc gattggcacc
    12781 tgacaactac catccatttc tgctaaaaac gttcgttcag cagtcacaca ttttgcaacc
    12841 tcatcattat gtactttgct taataatgtt aatagttctt catcgtcact acgacattct
    12901 atccctaaag caccttgtcc gattgcaggt aacaatgtat ctctatcaag ataagacgtt
    12961 acgatatcat ctgaccagcc cattcgtctt aaaccagctg cagctaaaat aatcgcatca
    13021 taatcttcag tttgtaactt ttctaatcgt gtatctatat tacctctaat ccatttaatc
    13081 tctaaattag gatacttaga taatatttgt gcaccacgac gtaatgaact agtaccaata
    13141 atactgcctt ctggcaattg ggatagtggt gtatgtgttt tagaaatata cgcatcaaaa
    13201 ggtaattctc tatcagggat acaacctaat gttaaacctt ccggaattac acttggtacg
    13261 tctttaagcg agtgtattgc catatcgata tttttttcaa aaagttcatg ttgtatttct
    13321 ttaacaaata agcctttgcc tccgacttta gataattgtt tatctactat acgatcgcct
    13381 ttcgtgacaa tttctttaat ttcaatttct agatttggct cgacagcttt taatttatca
    13441 ataaattgct ggctttgtgt taaagctaat ttacttcttc tggagccaac gactaattta
    13501 cgcatgttca attcctccta ggaacggatt gctctagatt attttctcaa ttcacaaaat
    13561 gtgttgcaaa aaataaatta atcatattta agcaaaataa aataatgtta tagtatatta
    13621 aataccttga attcaaccat ttgttgattc taagtaaaat ataacttcca tataatactg
    13681 taataattga agagagtatt accttcgggt caatgaatat acgttcacca actgaaatta
    13741 caccccactg tgtacctaaa ataatactaa atatgagaat tatccaccca cttaacgttg
    13801 agtaaaacac aattgattca agtgtagcaa cgctacctat tctaaagtat ttttgatcaa
    13861 aacgcttttc cttcaaatta cggtattgca tgatatacag taatgcattg acaaaagcta
    13921 aggcaaagaa gacataactt aacacagcta gaccaatatg gactaacagt aactcgtcta
    13981 caacagcaat tttctgaacc ttattggtat aatgtgtcgg ttgaaatgta ttcatcccta
    14041 aaagtgttaa ccctattaaa ttcaagaaaa acacagagaa attcaaaact ttgataaggt
    14101 taagaattaa agagattgaa ataatcagcc aacttaaagt atagaataca tctgaaatag
    14161 accctaatgg aatatgtcta gtttgtataa taaaaataga taaagagatt gtttgtaaaa
    14221 cccaaacaat ccccaataaa tatatgccta aacttctaat cttatgactt ttttggacaa
    14281 aatcataaaa atagcaaatg atactgatta agtatattaa taatataatt tcattgaatc
    14341 gaataaacag gttttcttgc atattatcac catattaata tgcttattca aaactaaaga
    14401 tacgtcgcgc tgaaatttcc ttgaccttgc tttctttttg ttgcttcgct tgctcatgag
    14461 gacattcagc ttcgatatca aatatatttt gaaatagctc taatttttca ttacttttct
    14521 tatcactact taattctttg gcctgtttaa taggatcttt caacatttga ttgatgatac
    14581 tttttgtatg tttagatata attttacgtt ctctttcgct taaacctggc aatttacgat
    14641 caatactgtc catcgtttct gcttgaattg ccatagcttt ttcacgtaaa gctctaatca
    14701 ctggaacaac acccaacata ctaatccact cattgtgtgc atgtatttct gcaggaattt
    14761 gttccgaaat tgttgcagcc gctaattgtc gctcacgtaa gtttgcatca actaaacctt
    14821 ttaagtcatc aacatcataa ttaaagatgt ttgtgatggc actaatacca ggttcaatat
    14881 ctcgaggaac tgcaatatca atcaatacta gtgaatcttg ctttctattt tctgcaattc
    14941 tttctatcat ttcatttgta atgatataag tttgtgcact cgttgaacta atcacaatat
    15001 ctgcactttc aagtaaattt ggtaatgatg atagttcatc atatttcact tgatgctttg
    15061 ctgctaattt catagcattt tcaattgttc tatttactac tgtaatatca gtaattccag
    15121 aaccaagaag atttaatagt gataattcac tcatttcccc tgcaccaata atgatagctt
    15181 gcttactttt caatttgcca aatacttttt tcgccaactc gaccgcagca taagacacac
    15241 ttacagcatt atcagctata tctgtttcat tatgtgctct ttttgcaaaa gtaattgcct
    15301 gtttaaatag atgattaaaa attgttcctg tcgtacctgt gctttgcgct aagaaaaatg
    15361 catctcttat ttgacctaaa atttgagttt ctccaagtac gattgaatct aaaccagaag
    15421 tgacacgcaa taaatgttct actgcttcgt cccccacttt tacttctgac attgttttaa
    15481 tatcatctac ttcaaatcca aatgcacgag ctagaaatcg ttgaatatag taacgacctg
    15541 tgtgaatttg atcaacaaca gcatatactt cagttcgatt acatgttgat aatatgacat
    15601 tttctaaaat agatttagtt tcatataaat cttcatgggc aattcgtaag gcatcatctc
    15661 taaaagcaac ttgctctctt agtgcaacat cagctgtgcg atgatttata ctaattgcaa
    15721 taaaatgcat ttgaaacgcc cccatatata ctaacaatac aaatattata acataattta
    15781 aaatccaatt aagtacgatg cttaaataaa ttataatctt tctaatttac ttttgagttt
    15841 ttgacaaaat gatgaacgtt gaaaaatgtt atcaattgtg tactaattaa aagtttcgtg
    15901 cttacattat ttttaaaatt tttgtataag ttttgtcgta caaaaactat gaaatatacg
    15961 gttcaattaa attccatatt tgttgttgtt tattattttg aattgatgaa taacttacaa
    16021 ttgtatcgtc tggatccata tctaattgtg tcttaatatt tttaatatgc ttttgaactt
    16081 ttccttttgg aattttgtct tctttagtac atataactaa agtaggaata tcaaaatgtt
    16141 tcaaataatt gtacattaag atatcatctt gtgttggatc atgtcttaaa tcaactaatt
    16201 gaataactaa ttgcaaattc tctctcttag ttatgtattc ctcaatcatt ttcccaaatt
    16261 tttcacgttg tgttttactt actttagcat atccatatcc tggaacatcc acaaaaataa
    16321 gttgttcatc tatattataa aaatttaacg tttgcgtttt gccgggttgc tgtgatgtac
    16381 gtgccatatt ttttctacca atcatactat tgataaatgt agacttacct acattagatc
    16441 gaccgctcag tgcaacttca gacaattctg tttctggata ttgttcttcc tttactgcac
    16501 taatgattaa ttctatatta ttaggattaa ctttcatttt gtatcctcac ttttttatat
    16561 tctctttcaa ctctaccatt atataatatt tgaacctttc ggtatacatt ataaaaaagc
    16621 tccaatcaaa gttaaactat ttgagcgtca actttgattg gagcttttca cttttataac
    16681 acatcaatga ttaagctgat gttttactat tattaattaa attaccttct gcgtcgtata
    16741 gttctggttc agtttcttca ttaattgttt gtgctgtaat aactaccttc gttacatttt
    16801 cgttagaagg cacatcaaac ataatatcga ttaacgattc ttctatgatt gaacgtaaac
    16861 cacgcgcacc tgtttttctt tcaattgctt tttcactaat ggctgataaa gcttcttcag
    16921 tgaactctaa atccacatca tctaattcca gcattttagt atattgtttc acaagtgcat
    16981 ttttaggttg cgttaagatg tttttcaacg cagttacatc taatgtttct aaattagcta
    17041 caattggcac acgtccgata aattcaggaa tcaaaccata ggcttgcaaa tcttctgggc
    17101 gaatttgtgc taataatgct tgttcgtcat atttatcagc ttcattgctt gagaaaccaa
    17161 taactttttc accaagacgg cgcttaatca cttcttcaat accatcaaag gcaccaccaa
    17221 gaataaataa gatatttgtc gtatcaattt gaatcatttc ttggtttgga tgtttgcgtc
    17281 caccttgtgg cggaacactt gcagtcgtac cttctaagat tttaagcaat gcttgttgaa
    17341 caccttcacc tgaaacgtca cgtgttatag atgtgttttc agatttacgt gcaattttat
    17401 caatttcatc tacataaata ataccttttt cggctttatc aatgtcaaag tcagctgctt
    17461 gaattaatct caacaagata ttttcaacat catcgcctac ataaccagct tcagttaaac
    17521 ttgtcgcatc tgcaattgca aatggtacat tcaacgtctt ggctaatgtt tgagctaata
    17581 atgttttacc actacctgtt ggcccaatta aggcaatgtt acttttttgt aattcaacat
    17641 catcttcttt tggtcctaat tgttgaatac gcttatagtg gttataaaca gccacagcta
    17701 aagatttttt agctttttct tgaccaataa catattcgtt taaatgatcc ataatttctt
    17761 taggagtagg taattctgta atcgcttcag aagtgttttg agctaattct tcttcgacga
    17821 tttctgagca taattcaata cactcattac aaatatatac accacttcct gctacaagtt
    17881 tttttacttg atcttggtct tttccgcaga aagagcattt caaattttct tcatcttcat
    17941 tgaatttaaa cattcttttt acacccctat tcgttaaaga ctatactaga ttggatatta
    18001 caatgcaaca tattaacata caaacttttt gcttaaagaa tagtagcaga tacataagct
    18061 atgcatctgc tactcatttt tgtaatttaa tatttaatga agattaatct tctttagttc
    18121 cttcaacgaa ctttgcgtta tctcttaata aatcgataac tttttggata cgaacatcat
    18181 ttttaatgat atcagtatta cctaaagtat ttttgatatc ttcaactgag atattaaatt
    18241 gtttactcat tttttctaat tctttatcga tatcttcatc agtagcttcg attttttcag
    18301 cttcagcgat tgcagttaaa gttaagttag ttttaacacg ttgttctgca tcgtctttca
    18361 tttgctctct taattgagat tcatcttgac ctgagatttg gaagtacgtt tgtaaatcta
    18421 aaccttgttg ttgaattctt tgtgcaaatt cagacaccat acgatctaat tcagtattaa
    18481 ccattgcttc aggaatatcg attgttgtat tatcagtagc tttagtaatc gcttcttctt
    18541 tttcaacatt ttctgcatct gtagcttttt gttcagctaa acgtttacgt aagttttctt
    18601 tgtactcgtc tactgtattt gcttctgcat ctaattcatt agcaatttca tctgttaatt
    18661 ctggaacttc cttgaattta atttcgttaa cttttgtttt gaaagttgct tctttaccag
    18721 ctaattcttc agcatggtat tcttctggga atgttacgac aacatctttt tcttcgtcaa
    18781 ctttcatacc ttctaattgc tcttcgaaac caggaatgaa tgaacctgaa ccgatttcta
    18841 aatcgtaacc ttcagcttgt ccaccttcga attcttctcc gtcaactgaa ccactaaagt
    18901 cgatgttaac tgtgtcgcca ttttcaacaa caccatcttc tttaactacc atttcagcta
    18961 aatgtcctaa gctgtggtca attgcttctt gtaactcatc atcagataat tcagtttctt
    19021 gtttttcaat ttcaagacct ttatagtctc ctaatttaac ttctggctca actgtaactg
    19081 ttgcttcaaa aatgaaatct ttaccttttt caatttgagt aacacttact tctggttgtg
    19141 caactggttt aatatcagtt tcgtcaattg cttcaccata agcatctggt aataaaatgt
    19201 cgatagcatc ttgatataat gcttctacac caaagcgttg ttcgaaaatt ggacgtggta
    19261 ctttaccttt acggaatcca ggtacgttaa tttgtttaac cacttttttg aatgcttgat
    19321 ctaacgcttt gtttactttt tctgcaggaa cagtaacagt taataaacct tcgttacctt
    19381 cctttttttc ccaagttgct gtcatgtata tatacctcca tgattaacta atttattttt
    19441 tcaacttccc tattatatca taggtctatt ccctatacaa acattgaaat cacaacgttt
    19501 atatatttgt aaatcaactt ttttcgtcaa aactatatta aaatgctgag tattattttg
    19561 caacaattta actattatta ttcaaatcta attgctgaat aaaattaaat gcatcgatac
    19621 tttgtaattc acatttaagt cctaacatat ttttgaaata acattcgtat gcattaatcc
    19681 atttattcgt ttcaaacaaa gtttcaatat caattggata aatcattata gagtgattat
    19741 tcataatatg gtgtgcttct tcagcgatat gtaaagcacc atcatttaat gtttccataa
    19801 cgttaggtat aactttttct ttcagtgttg tatgttctag cccttttaaa ttagctggta
    19861 caaaagttac atccatgcca tacttttcaa ttgtcagttc ttgtgtacat tttgcgaacc
    19921 ttaaatactc aatcattaaa ctaattaggt tataactgta cgtattagat tttaatatat
    19981 ataataccgt ttcttgaaat tgaaaatgac cattgtctat taacttcaaa atcaagtgcg
    20041 tctgttccct cattgataac atatcaaaat cagttaatga ctgagtcaat cgtttttcat
    20101 cttcaattaa ttttgactta gcaaattctt taagaggatg taatgccatt cttgttttgt
    20161 gatctttgac ttcatcaata atttgatgaa ttacttctac cgcttcaaaa tattgtccca
    20221 aacctatcaa acttttcacg taataaatca tcaatgcatc atattgttgt atgccagttt
    20281 tcaataagac aattgtttct tctcttaatt caagaaatga ccccgtctca tataacatac
    20341 ggcatttcat cattgctatt tcttcagtga gttcaaattg acgttcatat tgtacaatat
    20401 attcatacat caggtcatag tttcggtctt gttcagcacg ttttatatct ttatataact
    20461 ttttcgaaga gttaggaaac tgaataatat ctgacatata tgtcacctcg tttgattata
    20521 aatcttgaag gattaatgcg ctccacgttt cgaaatcatc atatgactct atgttgcctt
    20581 tttcaaccca ttttattcgt aaagtatctg tttcttttgc ttctacatca ttcgtactta
    20641 cagtgatttt aaatacaaca ccaatatgta ccttgcccac ttcattatta tcgtcattaa
    20701 taaaaccgat atattccata ttttgtgaat cttgctcact taaacctact tcttcttcta
    20761 attctctctg tgcattaact ctcaatactt cgttaataga ttctgctcct ggaacatcat
    20821 tcatatgacc gcctacacct attgaagatt gtccatgcaa tcgagcttct ccaccgccag
    20881 ataatcgttc atacactaat atctcgccat gctcattttc aagtaaacaa taagaaatga
    20941 gttgtttata tgatggatcc tcttccatat cgccgcgtcg cttaacttca tattgactta
    21001 gcgcatcaaa aatattttga ccttctggtt tattcttatt taaaaaccca ttgaaagtat
    21061 tcttttcatt attaaaaata atttctctag gtactacaat gatttgttca tcaaatttag
    21121 acatcgtata aaactcctca ctttaatgtt tgttctctta aatgcatttt agcaaatatg
    21181 tcatatttta gcgattaaat gtggcatttt gctatttaaa aaataaaaaa aagagatgac
    21241 aacgccatct cttttttata agtgttatta ttttaaagca tctttagctt tagttactaa
    21301 ttgagcaaat gctttttcgt cagaaattgc aatttctgat aacattttac ggttaatgtc
    21361 gataccagct tttttcaaac cgttcattaa acgtgagtag ctcatttcat gttgacgagc
    21421 tgctgcgttg atacgtgtaa tccataattt acggaagtca cgtttacgtt gacgacggtc
    21481 acggaaagcg tattgacctg atttcattac ttgttgctta gctactttgt ataatgtatg
    21541 ttttgaaccg aagtaacctt tagctaattt aatcgttttt ttacgacgcg ctcttgttac
    21601 tgttccacct ttaactcgtg gcataaaaaa ttcctcctta ggtaattcct accgatttct
    21661 gtatttgttc ttattttttg tatgctaata attgttttac acgtttcata tcgctcttag
    21721 acactaatct agctttacgt aattgacgtt tttgtttagt gctcttgttt gcgaataagt
    21781 gagatgtgaa agctcttgaa cgttttaatt gacctgaagc agttctttta acacgtttag
    21841 ctgctccgcg gtgagttttc atttttggca taatataagt cctcctgtaa tagctttaat
    21901 tatttttcag ctgttggcgc taacatgata aacatttgac gcccgtccat tttaggtttt
    21961 tgttcaactg ttgctatatc tttgcattca tctgcatatt tttctagcac acgttgacca
    22021 atttccttat gcgtaatggc acgccctctg aaacgaatag atactttaca tttatcgcct
    22081 ttagttaaga atttacgtcc gtttttcaac ttagtttgga aatcatgttc ctcaatagtt
    22141 ggacttaaac gaatttcttt aacattgata attttttgtt tctttttcat ttctttttct
    22201 tttttctgtt gttcgaattt gaatttaccg taatccataa ttcttgcaac tggtggtttc
    22261 gcattcggtg caacgaccac taagtctaaa tctacacgtt cagccatttc taaagcttct
    22321 cgctttgatt taacaccaat ttgttcacca tcttgaccga ttaaacgtaa ttcttttgca
    22381 cgaattttgt cattgatttg agtttgatct tttgctatgg ttgacacctc caaaattttt
    22441 acgaaatttg caccaagcaa aaaggaagag caggtataaa atacccgctc ttccttatac
    22501 acagttatgt gtaatgtgat taacctgcca actgctttat gcgtcgctac aggtgagaag
    22561 cgggtgcttc tacttggttc gtttcgtatt caacgttgtt aatcatatca acaattcaca
    22621 tttaagtcaa cactataact gtaatttttt tattttaacc ttttatttca tccattgaca
    22681 cgtcttgacg taaatctact tgttctaatg gaattttttt cgttttatat cgaagcttat
    22741 gataaataaa gaatgctaaa aatactggaa ttcccatata cgtaattagg aagcggctaa
    22801 aattaaaatc tcctgtttta ataaagtcca catcttgacc gatgattaca acaatacata
    22861 agatagctgc aaaaataggt ccgaacggaa acaatttagc tgtatatttc aatttagatt
    22921 tatcataatt ttgtttatca aatgctcttc taaatcggta atgactcact gcaataccta
    22981 cccaggcaat aaagccagtt aacccacttg cagcaacgat atattgataa gcaccttctg
    23041 taacactttg taccacaaat atgatgacta caataattgc agttactaat aaagacatat
    23101 atggcacacc atttttattt gttttcccaa atgtttcaaa cgccaattta tctttactca
    23161 ttgaatatag cattcgagtt gaagcataca tacctgaatt acctgctgat aaaactgatg
    23221 ttaagataac tgcattcata aatgaggctg caaaagcaaa tcctgcattt ttaaaaacta
    23281 gcgtaaacgg agaggttgca acgtcattac cgcctcccat taatgcacta ctatcataag
    23341 gaattaacat accgataaca aaaatggcta aaatgtaaaa taataaaatt ctccagaata
    23401 cttgtttaat cgctttcggc acagcacgtt caggattttc tgattcacca gctgtaatac
    23461 caattaactc agtaccttgg aatgagaaac cagcgattaa gaatacacct agaattgata
    23521 acaaacttcc tcctaagttg ccacctaaaa taggtccttc acctttatta aatatttcaa
    23581 atcctacaaa atgtccaccc ataattccta caatcgttaa taaaccaata gcaataaaaa
    23641 cgataactgt aacaaccttt attaatgcaa gccaatattc actttcacca tagacacgaa
    23701 ccgataacga attcagacta aaaattataa ctaagaacaa cgcactccat gcccaagcgg
    23761 gtatgccttg caatggtgtc caatattgaa tgacttgtgc tgcaatcgta atatctgctg
    23821 ctacagttac tacccagtta aaccaatagt tccaaccaag cgcaaaccct aaagatggat
    23881 caacaaatct tgtagcatat gtactaaatg aacctgatac tggcaaatag gtagccattt
    23941 cgccaagtga cgtcattaag aaaaatacca ttattccgat aattgcgtat cctattaatg
    24001 cacccaaagc acctgcatca tgaattgctc caccagaagt tacaaataaa cctgtaccaa
    24061 tacaaccccc aatcgcaatc atagaaatat gacgatcttt aagtcccctt ttgacaacat
    24121 tgttactttc atttcgaact tttgacatat aagctccctt tccatgtttt agaggccaag
    24181 taataaataa cctttattta ctttcatacc ctttttttac agaacatagt gatattaaaa
    24241 gtaaaaaagt ggctacatac ctttaagata tgcaaccact ttggcaatta tctatataag
    24301 gtagcacatc acattctgtg acagtacagt tcctattcga aaactgtccc aatagatata
    24361 atttatggtt catatctatt tcggcatctt tacctttcac ttgttcaact tatgtaccat
    24421 aaatacttct gacaagttac taattaaaca tgcaacctct aactcaattt aatattttaa
    24481 ctaacttgta atatacagga ttcatcacgc ataatcaacc ctgtaaaact tgatacgcaa
    24541 taaaagtttc aaagcatttt attgcgacaa ctgtctatct atgttttttc aaacgaattt
    24601 catcaactag attccagata aattcatctt tttcaactgt ttcttggtct tgtgatccat
    24661 attgacgcac attcacttga ttattttcaa cttccttatc cccaactacg atttgataag
    24721 gtattttttg catttgagct tctctaattt tataacccat tttttcatta cggtcatcaa
    24781 tacttacacg aacgccttga gatttcaatt cgtcttgtaa ttggcgcgca taatcataat
    24841 gtaaatcaac gttaactgga atgatttgaa cttgttttgg cgctaaccaa gttgggaatg
    24901 cacctttagt ttcttcagtt aaaaatgcta caaatcgttc cattgttgat acaacaccac
    24961 gatgaataac aactggacga tgatgttcac catcttgacc aatataagtt aaatcaaaac
    25021 gttctggtaa taagaaatca agttgtgctg ttgataatgt ctcttcttta cccatcgctg
    25081 ttttaacttg aacatctagt ttcggaccat agaatgctgc ttcaccaatc gcttcttcgt
    25141 acgataagcc aagctcatcc gctgcctctt taagcatatt ttcagcttta ttccacatgt
    25201 catcatcatc aaagtacttt tctttatctt cagggtctct ataacttaat ctaaagctat
    25261 aatcctcgaa accaaagtct ttatacacat caataatcat gtttacaacg cgtttgaatt
    25321 cttctttaat ttgatcaggt cgaacaaaga tatgtgaatc atttaaagtc ataccacgaa
    25381 cacgttgtaa tcctgataca gcaccacttg cttcatatct atgcatagtt cctagctcag
    25441 cgatacggat aggtaattca cgatatgagt gtggtttatt cgcataaatc atcatatgat
    25501 gtggacagtt cattggacgt aataccatag attcagtttc gtctaactgc attggtggga
    25561 acatatcttc ttgatagtga tcccagtgac cagatgtttt gtataaatca acattagcaa
    25621 gtactggtgt ataaacgtgg tcatacccca tgctaacttc tttatcaaca atgtaacgct
    25681 caatttcacg tctaattgtt gcaccgttag gtaaccataa tggcaaacca gcaccaacta
    25741 attggctatt tgtgaataat tctaactctt taccaatttt acgatgatca cgttctttac
    25801 gctcttctaa catttgtaaa tgtgctttta attctttttt atcaaagaaa gcagtaccgt
    25861 atatacgttg taacattttg ttgttactat ctccacgcca gtatgcacct gctgtagata
    25921 atagtttaaa ctctttaatt ttagctgttg atggaacgtg aactccacga cataaatcag
    25981 taaaatcacc ttgactatat aatgttacat tttcatcttc aggaatcgcg tcgattaatt
    26041 ctaatttgta ttcatcattg ctgaataact ctttcgcttc atctcgtgaa accacttttc
    26101 gttcgatttt catattttcg ttaacgattt gtttcattgt tttttcaatt tgttcaaagt
    26161 catcagatga gatgttttgg tcaatgtcga agtcatagta gaagccacct tctattacag
    26221 gaccaacacc aaatttaaca ttaccatata atcttttaat cgcatgtgcc attaaatgtg
    26281 cagtagaatg acgtaatacc tctaacgctt cttcactacc tggtgtcaca atttcaattg
    26341 atccatcagt ttcaagcggt ttagttaaat ctacaagttg cccgttaaat ttgccggcaa
    26401 ctgctttttt acgtaatcca ggactaattg attgtgctat atcttcagta gtagtacctt
    26461 tatcaaacgc ctttttatta ccatctggaa attgaatatt aatttgttcc atgttaaacc
    26521 ctcctatttg ctttataaat acttttatct gacctcgtta aaatattgaa caacaatcat
    26581 cgttttaaca ttaaacctat taacaataaa cagggaattt atgacaccaa cgaacatttt
    26641 tgtctaaaaa aacaaaaaat cccgccccta tacaagggac gagatcgtcg tggtaccacc
    26701 ctagttattt aatacaagtt atatattaaa tatctctgct taagataacg gtcttgagcc
    26761 gggtattcat tacaaatacc ataaatgaag tagtaatcat ctaatttatt aaccatattc
    26821 tcatcaaaca atggctttct gtgtaatatt gattagatca tcttgtcttc aatcatttaa
    26881 acgatttaga tttgtattca ttatacacca atcattttaa aattcaattg tttctgaaat
    26941 tttctcctga taaaaagtat ggtgttgaca aagatttgac acgttcaata atacgtgctg
    27001 ctttagtctt ctcttcacca tcacgagtca tcgctaaatg atgttccaat tcactatagt
    27061 caaaattaga actaaagaat gttggtaatt catgaaccat tcgataatgt agcaaaggtc
    27121 caattacctc atctctcacc catggagtca cttcttcagc cccaatatca tcaagcatta
    27181 aaatgtttgc ttctcttacg cgatgtaatt tcttttcaaa agaaccatct ttaaagccac
    27241 cttttaatgt tctaataaat tccggtaaat aaataattgt cgaacgtacc ttcttagatt
    27301 tgagctgatt cgcaattgca cctagaataa aagatttacc tgtcccaaat ggaccataaa
    27361 ggtaaagccc tttcacttgt tccccattag ttattgctgt acaaatatca tctgctgcca
    27421 tagctacatc aagacggtct cgatgattca tataaatatc tttcaatttg gcatttaaag
    27481 tatctcgttg catatgatga gatgtaatta actcagcttc aaagcgttct tcgtcgtact
    27541 tgattttaca tgggcattgt aaatagcgta ttttaattcg gttattatca acatataact
    27601 caggcacatg cccctttacg aaatttggac aatcagcaaa tttatgaccg tcataatgtt
    27661 tttgttgatc tttatactct tgtaacacat ttaagtcttc atcaatcata gcattcgtta
    27721 attcagctcg atgcgcttcc aaaaattgct taacatctgg gtcattgatt acttcttttt
    27781 ttatcttttc tattcttttt tcaaagtcct gcgacgtgtt aattatactt ttaaattgct
    27841 tcattattga ctgtcctcct cccatttttt agataattta tctagaaatg cttgtcgatc
    27901 ttgctctaat tgttgatcat ctacgctatt atctttagcc gaatcttctt cactaggttt
    27961 atctctattt tctaaccatt taggtgtttt ttcttttgaa atgcgattac gctgcccata
    28021 gtatgaacca cgcttttggt aatttccgct agaaccctca tttttagatt gattaacttt
    28081 tttagcgtaa ttatatgctt ctttagctgt cttaatacct tttttcttcc aatttgatgc
    28141 tatttccaaa atatacgctt taggaagttt catatcttct tttaacatga caaattgcaa
    28201 caaaatatta atgacgccaa aagacatttt ttcacgttca attaattctt caaccattgt
    28261 cttttgcgat atagttggtt ctgattcaga ccaagaagct aacatatcaa ttggactcgt
    28321 ttgttcaagt aattcaaacc attcatcact ttgtggcttt ggattcactt ctgaagattt
    28381 ggccgtcgaa gatgatgtag caggagattt cacctgtaat ttaggcattt gattttcgtg
    28441 ttccattaag taatacgagc gtgcttgttt acgcatttct tcaaaggata actgttgtcc
    28501 acttgtaatt gaatttaaaa taacatgctt catgccatct gctgttaaac catataaagt
    28561 cgcgagttgt gtaattaaac gctttgcatc tttggtaaca atgtcttgac taataaaatg
    28621 tttacctaac atttgtctca acatttcaaa gtcaaaagat tcatttgata aatcgatacc
    28681 ttggtacggt tcattaatcg gaatatcact tgtatcgata tctatttttg tagacggcac
    28741 tttaaaaaca tcagtaaatt gtctcgttac ctgtttaaat tcactcaaat caatttgttg
    28801 atactcaaag tatttcttca actcatgaaa tcgacgatgc tcaacttcac tatataaaaa
    28861 gattgacaac attggatcat taaaaaataa atgtgctgaa ggcggttgaa ttaattggta
    28921 aacaaattgt gtttcttgtt catcatgttt gacaaacgcc tttaacaatc caatcgcttc
    28981 aagtaagtcc atttgttgtc taaactctag taaattaatt ttaagttcat tcataaaaat
    29041 ataatgagaa agaatcaatg tttcattatg actttcttta acgaattgag tcataaaatg
    29101 atataaaccc actgcttgtg ctccaattag cggtgtataa agtcgattca atacctctaa
    29161 atgattcgta tttaaatcaa agtgttgcat aactttgaat tgatcctttg gtcttaagcc
    29221 gaattcgaag gcttgtcgtc ccatttaagc atcactccgt ttgttttcgc ttaaaatccc
    29281 ttgcatcgat gctaacaatt gatcaacatc tttaaattct ttatagactg atgcaaatct
    29341 aacatatgaa acttgatcaa catgcattaa caagttcata acgtgttcac ctatatctcg
    29401 tgaagacact tccgtatgac cttcatctcg taattgccat tcaaccttgt ttgttatgtc
    29461 ttcaagttgt tgatatctaa ctggtcgttt ctcacaagaa cgcacaagtc cattaagtat
    29521 tttttctctt gaaaactgct cccttgtacc atcttttttc acaactataa gctgactaac
    29581 ttcgatatgt tcaaatgtag tgaatcgtgt tccacaattt tcacattctc tccgtcttcg
    29641 aatggcattt aattcatcgg catgccttga atctacaact ttagattgtg tagaattaca
    29701 tttcgggcat ttcattacat caccctcttt attttgatta tgcctaatta tactataaat
    29761 ctagagatga aaaaagaatc cctcaattta attcatttaa ccaaataatg aaacaataaa
    29821 aaacattata tcgttacata ttaagtaata tgcatgacaa aattattgta ttaaaaataa
    29881 aaaacctaac tccgaagtca gagttaggct attaaataat tgtattaact tgcacttaca
    29941 gtttcttttg atgtcaaaag tgctccaatt tgctcagcaa catctacaac tctatttgaa
    30001 taaccccatt cattatcata ccaagcaata acttttactt tattccctga catgaccatt
    30061 gttgattttg catcaataat agctgaatgt ggattagtat tgaaatcaac agacactagt
    30121 ggttgatgtt cgacttcaat gataccttct aaacctgcat tttcaaaagc ttggtttact
    30181 tcttctgcag ttacttcttt ttctaaatca acaactaaat caacgagcga tacattcttt
    30241 gttggtacac gtaatgccat gccatgtaat ttaccttcta attctggtaa tacttctttt
    30301 aaagctttcg ccgcaccagt agaagtagga ataatgcttt cattacatga gcgtgcacgt
    30361 cttaaatctt tatgtggatt atcaatattt ttttggtcat ttgtaatagc gtgaacagta
    30421 gtcattagac cattaactat tccaaactga ttatttaaaa cttttgcaac tggaccaatg
    30481 caattagtag tacatgaagc attactaaaa atgtcaaatg cttctatatc taattggtca
    30541 tcatttacgc ctttaactac catttgaaca tgtccacctt ttgaaggacc agttaacaat
    30601 acttttttgg cacctgcttt aatatgtgcg atggctttat caccatgatt aaatttacca
    30661 gttgcatcta tagcaatatc gatatctaat tctttccatg gcaagttttc aggattgcga
    30721 tcagcaacca atttaatttt atgatcacca acttgcaatc cattttcaat cggttcaact
    30781 tttagattat attttccatg tgttgtatcg taattgatta aatgtgcaat tgtttcgggt
    30841 ggataactag catttatcgc tactacattt aaatttttat tttgtaatgc aatacgtaat
    30901 accattcttc caattctacc cataccatta attgcaatat tcgttgacat taaaagcacc
    30961 ccttgatttt tatgtgttat actttatgga attagtatag catattatat gaaatttgaa
    31021 agcgttttcc gttgatttat ttatcttttt tataaaaaat agtcattact tacatacatc
    31081 aacgcgtacg taaagtaatg acttatttat agagtaatat taatcttctt ctccgtaatt
    31141 cggcttttca atataacctt cttcttctaa caatctctca aggttttgtt ttaattcaag
    31201 tttatcccct aaattatcga taacatgatc ggccattcgg ctttttttat caatagaaat
    31261 ttggctatag acacgagctt tcgcatcttc taatgacaaa ttattacgtt gcattaaacg
    31321 atccatttgt atactttcag aagtgtatac aacccacact tcgtctactg tattttccaa
    31381 ttcattttca aataataatg gaatatccat gattacatta tatccttgtt ttaaatattc
    31441 ttgcttttct tcttccataa tatctcgcac gataggatgt atgatagcat ttaattctaa
    31501 gcgtttttct ggatggttaa acactaaatc acccatataa cgacgattca tctcaccatt
    31561 ttcatcaata gcttcatcac caaagacttc tcgtacttga gctaaacctt tactcccctt
    31621 tttaacagct tccctggctg ctttatcagc atctactact ttaaaaccga atacggataa
    31681 gagttctgat actgttgatt ttcctgaggc gattccacct gttagaccaa taactttcgg
    31741 cataatttca ctctttcttt atttttgaca tactggacaa taatgactat ttcttgtcgc
    31801 gatgattttt gtttcaattt gacttccaca cactttgcat accggctgct tatatacatt
    31861 aagatgcaat tgcatctcac cagtttttcc atcagcatga cgataatctg aaatacttgt
    31921 accgccaaat ttaatacctt cttctagtac ttctctaaca taataaaaaa ccatttcttg
    31981 ttgttggtgt gttaagtctt ttactttttt atctggtaaa acacctgcac gaaacaacgc
    32041 ttcacatgcg taaatatttc cacaacctgc gattacttta tgatccaaaa tcacttgttt
    32101 gattggttta ttcttattag actgttgatg aattcgattt aaataatacg tcaatgcttc
    32161 atttgaaaaa ggttcaggcg ctatttctaa aaatgaagga taagatgcta cagacgcaac
    32221 atttctaatt tctccaaaac gacgtatatc tgaataaatt aactttttgt catttgacaa
    32281 ctcaaaaata acatgccaat gtttacgata attaggtatc ataatatctt caagttcatt
    32341 tacaatgaaa aaaccacccg ccatacctaa atggctaatt aatgtacgtt gttctcgttt
    32401 attatctagt tgaaaaacga tatatttact tcttcgttct acattagtaa tggtatagcc
    32461 ttccgataaa gttttaaaag tatctaattc aattcctttt ataattgttt ccttgccttg
    32521 agctttacct tcgattactt tatccgaaaa tataacgtgt tcaatttttt gatttataac
    32581 gtagggttca attcctcttt ttacatgttc tacttctggt aattcgggca taccattaac
    32641 ctcactttat tttgcatcat accaagttgc accataactt gagtctactt ttaatggaac
    32701 atctaattgc aatgcatttt ccattatctc ttctacaaat tcactaaatg aatctacttc
    32761 tgacttaggt acttcaaaaa ttaattcatc gtgcacttgt aataatagtt tagcttgata
    32821 tgttgtctct ttcatttttt gcgcaaattt aaccattgcc agtttaatga tatctgcagc
    32881 actgccttgt attggcgtat tcatagcagt acgttcagca aagccgcgta aattaaagtt
    32941 acgactcgta atatcaggaa tatagcgtcg acgatgtagc aatgtttcca cgtaacctaa
    33001 agctttggca tcttttacaa tatcagacat atattgtttt acacctggga aactagctaa
    33061 ataatcatca atgaatgctt ttgctttttt acgagtaata cctaaacttt gacttaaacc
    33121 ataatcactt atcccataaa caattccaaa gttaaccgct tttgcttgac gacgcattaa
    33181 actatcgact tgatcagctt ctacaccaaa tactttcata gcagttgctg tatgaatatc
    33241 atcgccgttg ataaatgctt ctttcatact ctcatcttgt gtaatgtgtg ctaatacacg
    33301 caattcaatt tgagaataat ctgctgataa tataacgcta tcttttgaag ttggtttaaa
    33361 ggcttttctt attttacgcc cttcttcaag tctaaccgga atattttgta aattaggatc
    33421 tacacttgat aaacgtccag tttgcgctaa agtttggtta aaacgtgtat ggatacgttg
    33481 atcatcacta attacctttt gcaatccttc aacataagta gactgtaact tagataattg
    33541 acgatattct aaaatataat caatgatagg atgttcacct tgcaattgct ctaagacatc
    33601 tacagcagta gaatatcctg ttttcgtctt tttaataaca ggtaattgta atgtctcaaa
    33661 caatacaaca cctaattgct taggagaatt tatattaaaa tcttcaccag ctgcatcatg
    33721 tatatttcga attaagacat ctaatttttc ttgaatttct ttttccattt cttctaaatc
    33781 atgaacatct gtatatatac caatttcttc catttcactt aaaatcttag ctagcggtag
    33841 ctctaaatca gctaagagtt ctacctgatt gtattcttct aattgtttat ccatatttgg
    33901 tttcacaaag taaattgcat cagtaataga agcaacatat ggatttaaaa catcatcttc
    33961 aggcacctta aatttcttac cttttccata tatactcaca tcgtctttca caaaactttg
    34021 accgtacaat gaaacaactg attgaacatc actaatcgta cgagatggat caattatata
    34081 actggccaac ataatatcga atgaaatatt ttgaatatca attcccaatc tatgtgatgc
    34141 tacatatgtt tttttagcat catatacgac ttttttcgta ttcggatttt ctaaccatga
    34201 aactagttcg gcataattat ttatgtcatc cgcattaatt acaatatgtt tctcacctgt
    34261 aaataaagag aattttaaaa tattatttcg caaatagtta ccaccctcta attcgaaatg
    34321 gatggccgct tctttcaatg aagtaaaatc aacattatca aaagacgttt caatttcaaa
    34381 tgtcttttct attgcatctt caacgcttgc tgattgatca atgtcagcca acaattgttt
    34441 gaattctaac ttcttaaaca attcgatttt ttcttgttgt tcatcttgat gagtcattaa
    34501 cgtatcttca agttttactt caatcggact atctacatta atcgttgcta attctttact
    34561 cattaatgca tcttctttgc tattttgaag tttttctttt aactttttac ctgaaatttc
    34621 atctaaatgt tcatagacac cttctactga gtcaaattgg ttcagcaatt ttattgctgt
    34681 tttctctcca acacctgcaa cacctggtat attatcagaa gtatctccca ttaatccttt
    34741 catatcaata atttgattag gtgttaaccc gttgtatttt tccgcaataa agtcaggtgt
    34801 ataatgatca acatcagtaa cacctttttt agtgtaataa atggttacat tatccgttgc
    34861 aagttgtgtt aaatctcggt ctcccgtaat aataattgtc tgaaagcccg ctttatctgc
    34921 ttctttactt aaagttccga taatatcatc tgcctcatag ttatctaatt cataacgttt
    34981 aatatgataa gcatctaata attggcgtat ataaggaaat tgctcactta gttcaggtgg
    35041 cgttttctgg cgtccgcctt tatattcact atatttttca tgtctgaaag tcgttttacc
    35101 tgcatcaaac gctactaaaa aatgatttgg cttttcttct tttaaaatct tctctagtaa
    35161 cattgcaaaa ccatatactg cattggtatg aatgcctgct ttgtttgata acaaaggtaa
    35221 tgcataaaaa gctctaaaac ttaagctatt accatcgatt aatactaatt tattcacaat
    35281 tttaacctcc agaactaatt tatatatatt ttagcatatt cgactgtgat gtcgtaatta
    35341 aagaaactat ctcatagagt atttatacac gacctaattt caaataaaac aagtgactat
    35401 atagactaag ctaaaaaata aaaagacata atcatgattg ttcttgatga gcactccata
    35461 aagtcaggtt aaaagtccaa cttttgagat gcacattatc atttcatgat tatgtctact
    35521 ttttaatatt tttatgctgc tattttaaat ttttataggt aagaataagt tatgaatcgt
    35581 cagaaccaaa tggaatatat ttaactttgg tcattttcgg taattcttca taattattaa
    35641 accactcttg gtaattttta ttgattggtg acggatgatg catataatgt tcaaacggca
    35701 atgattccac tgtataaacc tcttgtcgtg gatgatcttt aatttgttgt tttaataact
    35761 gaactctttt ttcatgttca taatgaacat aaataaatgc actaagatat atcatagcta
    35821 aaactagtga tgcaccttta ataaaattaa cattgattga cttatatttc cgaaattctt
    35881 ttaataaaat aattaaaatg attacatgta tcgtataaac aatcaaaaaa ttacctggtt
    35941 caattggagt aacaatgact agtgtcgacg ccgaaacaca tattgcaata agtaaggaat
    36001 ataaagtaat ttgtgtttta cgatcattaa tagacaaata aatacctaca aatatcgaaa
    36061 acgcaaagta accacataca attacgttcg caaaaccaac caatccaata tctgtatttt
    36121 tatttaataa aaactgattg taaaatagta aataataaag cggtaaagtg ataaatccta
    36181 tcataatgat acgacgcttt aatattgtta aatgtacata ccgatcactt ctaagcagta
    36241 gataaataat aagcgctgca atcatactta aaattataac ctgactgaaa atgacaccat
    36301 atggaagtga cgttgatatc atttctgcaa attttgaaaa gataccttga ttattagaaa
    36361 cttgttgata ttctgatcct tcaaataaaa ttttgcgata atttggattg gaaaacataa
    36421 tgattgtacc tatagtagca atcataaatg aaaacaataa tttataatta agtgttcgat
    36481 ttgcagtaaa ttcatacaga aaagctaaaa ttaaaatgat acagtggaat aatgtcacat
    36541 tctccataaa taattgaccg aagaagcata aaacatagaa tagtactgta acacttaccg
    36601 gctgcttttc tttatatata attgcattaa tacaataata aatgataaag agtgaaatta
    36661 gtgttgatgt cgcataattg taaaatcctg caaaccagcc aaatgtatct gcataaatag
    36721 cacttggtaa aattaacatt aaagaaaatg ctaacaaata atagcttgtc cacgctttac
    36781 aacgtgtaat gtgcataatc atccaaatga tccccatact aatgagacca tatgaaagcc
    36841 aacgtaacca gcttacatgt acagctataa tttcaaagat atttccgata tagcgaccat
    36901 taagtgatgc aaatcctact tttaaaatat cagtattata attgctaaac cattgtaaat
    36961 catcgtgcat gagtggtagt aagataccca taaaagtata aaacaataat atcgcaatta
    37021 atatcaaagt tgtcttgtgt aattgaattg ttttcacttt gctaatcctc aaatctagtt
    37081 aaattttcct caacttgtag gtcgaaaaat taattcaata tttataatgt atttctaatt
    37141 ttcacctatg catgtttcct caatcaaatt agataaacaa ggtatttaat attactttca
    37201 acaatttatc taaatcgctc ctcgtctttt tctatgacga atgattacac ttgtgtattc
    37261 aagtgtttaa attaagattt atttccgttc aaataaaact tattactttt taattaagca
    37321 tctattttaa gtgcgttact aaaatttctt tattataata aatatattat aaaattgctt
    37381 gattcacaac a
//
LOCUS       DALMNS010000009        36924 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.009, whole genome shotgun sequence.
ACCESSION   DALMNS010000009 DALMNS010000000
VERSION     DALMNS010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 36924)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36924)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36924
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.009"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            136..537
                     /locus_tag="O6Y56_000395"
     CDS             136..537
                     /locus_tag="O6Y56_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDB5573691.1"
                     /translation="MKKVNNDTVFGILQLETLLGDINSIFSEIESEYKMSREEILILL
                     TLWQKGSMTLKEMDRFVEVKPYKRTRTYNNLVELEWIYKERPVDDERTVIIHFNEKLQ
                     QEKVELLNFISDAIASRATAMQNSLNAIIAV"
     gene            complement(657..1220)
                     /locus_tag="O6Y56_000396"
     CDS             complement(657..1220)
                     /locus_tag="O6Y56_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDB5573692.1"
                     /translation="MKLERILPFSKTLIKQHITSESIVVDATCGNGNDTLFLAEQVPE
                     GHVYGFDIQDLALENTRDKVKDFNHVSLIKDGHENIEHHINDAHKGHIDATIFNLGYL
                     PKGDKSIVTKPDTTIQAINSLLSLMSIEGIIVLVIYHGHSEGQIEKHALLDYLSTLDQ
                     KHAQVLQYQFLNQRNHAPFICAIEKIS"
     gene            complement(1217..2170)
                     /locus_tag="O6Y56_000397"
     CDS             complement(1217..2170)
                     /locus_tag="O6Y56_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500380.1"
                     /note="This family includes YhcC from E. coli K-12, an
                     uncharacterized radical SAM protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="HDB5573693.1"
                     /translation="MGNHFQYAFENKRYHTWNYHLKNKFGQKIFKVALDGGFDCPNRD
                     GTVAHGGCTFCSAAGSGDFAGNRADSIAVQFKEIKEKMHEKWHEGKYIAYFQAFTNTH
                     APVEVLKEKFEPVLKEPGVVGLSIGTRPDCLPDDVVEYLADLNQRTYLWVELGLQTIH
                     QSTSDLINRAHDMKTYYDGVAKLRKHNINVCTHIINGLPGEDYDMMMATAKEVAQMDV
                     QGIKIHLLHLLKGTPMVKQYDKGLLTFMTQEEYTNLVVDQLEVIPPEMIVHRITGDGP
                     IDIMVGPMWSVNKWEVLNGIDAELARRNSYQGLRYKSKVKQ"
     gene            2280..3461
                     /locus_tag="O6Y56_000398"
     CDS             2280..3461
                     /locus_tag="O6Y56_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5573694.1"
                     /translation="MNIPKSVWWLVIGMALNITGSSFLWPLNTIYMKQELGKSLTVAG
                     LVLMINSFGMVIGNLLGGSLFDKLGGYKTILIGTFTCLCSTTLLNFFHGWPWYAVWLV
                     MLGFGGGMIIPAIYAMAGAVWPNGGRQTFNAIYLAQNIGVAVGAAMGGFVAEFSFNYI
                     FLANLIMYVVFALVAVTQFNIEINAKVKYPTHLDITGKKNKARFISLVLICAMFAICW
                     VAYIQWESTIASFTQSINISMAQYSVLWTINGIMILVAQPLIKPILYLLKGNLKKQMF
                     VGIIIFMLSFFVTSFAENFTIFVVGMIILTFGEMFVWPAVPTIANQLAPDGKQGQYQG
                     FVNSAATVGKAFGPFLGGVLVDAFNMRMMFIGMMVLLVFALILLMIFKENNTQPKKID
                     A"
     gene            3750..6167
                     /locus_tag="O6Y56_000399"
     CDS             3750..6167
                     /locus_tag="O6Y56_000399"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDB5573695.1"
                     /translation="MLNYNHNQIEKKWQDYWDENKTFKTNDNLGQKKFYALDMFPYPS
                     GAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYALDTGNDPREFTK
                     KNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAYVDEVAVNWCP
                     ALGTVLSNEEVIDGVSERGGHPVYRKPMKQWVLKITEYADQLLADLDDLDWPESLKDM
                     QRNWIGRSEGAKVSFDVDNTEGKVEVFTTRPDTIYGASFLVLSPEHALVNSITTDEYK
                     EKVKAYQTEASKKSDLERTDLAKDKSGVFTGAYAINPLSGEKVQIWIADYVLSTYGTG
                     AIMAVPAHDDRDYEFAKKFDLPIIEVIEGGNVEEAAYTGEGKHINSGELDGLENEAAI
                     TKAIQLLEQKGAGEKKVNYKLRDWLFSRQRYWGEPIPVIHWEDGTMTTVPEEELPLLL
                     PETDEIKPSGTGESPLANIDSFVNVVDEKTGMKGRRETNTMPQWAGSCWYYLRYIDPK
                     NENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFN
                     QGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGS
                     RRFLDRVWRLMVNEDGTLSSKIVTTNNKSLDKVYNQTVKKVTEDFETLGFNTAISQLM
                     VFINECYKVDEVYKPYIEGFVKMLAPIAPHIGEELWSKLGHEESITYQPWPTYDEALL
                     VDDEVEIVVQVNGKLRAKIKIAKDTSKEEMQEIALSNDNVKASIEGKDIMKVIAVPQK
                     LVNIVAK"
     gene            6189..6500
                     /locus_tag="O6Y56_000400"
     CDS             6189..6500
                     /locus_tag="O6Y56_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDB5573696.1"
                     /translation="MKSITTDELKNKLLESKPVQIVDVRTEEETAMGYIPNAKLIPMD
                     TIPDNLNSFNKNEIYYIVCAGGVRSAKVVEYLEANGIGAVNVEGGMHAWGDEGLEIKS
                     I"
     gene            6826..13382
                     /gene="sasC"
                     /locus_tag="O6Y56_000401"
                     /pseudo
     CDS             6826..13382
                     /gene="sasC"
                     /locus_tag="O6Y56_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500376.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG-anchored repetitive surface protein SasC"
     gene            complement(13499..14767)
                     /locus_tag="O6Y56_000402"
     CDS             complement(13499..14767)
                     /locus_tag="O6Y56_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDB5573697.1"
                     /translation="MYQTIIIGGGPSGLMAAVAASEQSSNVLLIEKKKGLGRKLKISG
                     GGRCNVTNRLPYAEIIKNIPGNGKFLYSPFSIFDNESIIDFFESRGVKLKEEDHGRMF
                     PVSNKAQDVVDTLVTTIERQHVTIKEEEAVSRIEVNTDQTFTVHTQSSSYVSHSLVIA
                     TGGTSVPQTGSTGDGYKFAQGLGHTITELFPTEVPITSAEPFIKSNRLKGLSLKDVEL
                     SVLKKNGKKRISHQMDMLFTHFGISGPATLRCSQFVYKEQKNQKTQHISMAIDAFPEL
                     NHEQLKQHITSLLSDTPDKIIKNSLHGLIEERYLLFMLEQAGIDENTTSHHLSNQQLN
                     DLVNTFKGFEFKVNGTLPIDKAFVTGGGVSLKEIQPKTMMSKLVPGLFLCGEVLDIHG
                     YTGGYNITSALVTGHVAGLYAGHYSHASME"
     gene            15174..16835
                     /locus_tag="O6Y56_000403"
     CDS             15174..16835
                     /locus_tag="O6Y56_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HDB5573698.1"
                     /translation="MSESKEMVRGTFLITISILITKVLGVLFIIPFNYLIGGQENMAP
                     FTYAYAPYNIAIAVATAGVPLAASKYVAKYNAIGAYKVSQKFYKSSFIVMSITGVLGF
                     LVLYFLAPYISELTLARNVHDKNGWSVDDITWIIRIISMVVIFIPVLATWRGIFQGYK
                     SMGPTAVSEVTEQIARVIFILIGSYLVLNVFDGSILLANGIATFAAAVGAIIGIFTLW
                     YYWRKRKHNIDRMVESDYTDIDVSYGKMYKEIIAYSIPFVIVSLNYPLFNLVDQFTHN
                     GALSLVGIPSQLQDIFFNMLNMSTNKIVMIPTSLSAGFAVSLIPYITKTFAEGRLHEM
                     HHQIRTSIGVLMFITVPASIGIMALAQPLFTVFYGYDPIVLGHDPNHDGSRLLFYYAP
                     VAILISLLSVTASMLQGIDKQKLTVYVILASVVIKLALNYPLIMLFHTPGAILSTSIA
                     LLFAIGCNFYILKKYAKFKFSYSWIHFAKIFLYSFIMMLGVELVFFLANLFLEPTKLG
                     YLIIIILGVTVGILIYGTITIKTRFADEFLGEIPEKLRRRVRFLR"
     gene            16832..17527
                     /locus_tag="O6Y56_000404"
     CDS             16832..17527
                     /locus_tag="O6Y56_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HDB5573699.1"
                     /translation="MRIDKFLANMGVGTRNEVKQLLKKGLVNVNEQVIKSPKTHIEPE
                     NDMISVRGELIEYVENVYIMLNKPKGYISATEDHHSKTVIDLIPEYQHLNIFPVGRLD
                     KDTEGLLLITNDGDFNHELMSPNKHVSKKYEVISANPITEDDIQAFKEGVTLSDGKVK
                     PAILTYIDNQTSHVTIYEGKYHQVKRMFHSIQNEVLHLRRIKIADLELDSNLDSGEYR
                     LLTKNDFDKLNYK"
     gene            17544..17966
                     /locus_tag="O6Y56_000405"
     CDS             17544..17966
                     /locus_tag="O6Y56_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HDB5573700.1"
                     /translation="MAKGNLFKAILGIGGAVAAVLVTRKDSRDKLKAEYNKYKQDPQS
                     YKDNAKDKATQLGTIANETIKEVKTNPKEYANRLKNNPKAFFEEEKSKFTEYDNKTDE
                     SIEKGKFDDEGGAAPNNNLRIVTEEDLKKNKNALSDKE"
     gene            18643..20052
                     /gene="sapep"
                     /locus_tag="O6Y56_000406"
     CDS             18643..20052
                     /gene="sapep"
                     /locus_tag="O6Y56_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mn(2+)-dependent dipeptidase Sapep"
                     /protein_id="HDB5573701.1"
                     /translation="MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRK
                     ALDYMYEIAHRDGFTTHDVDHIAGRIEAGKGNDVLGILCHVDVVPAGDGWDSNPFEPV
                     VTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYF
                     KTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMV
                     PDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIG
                     VNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGV
                     ITYDNENAGLFGINLRYPEGFEFEKAMDRFANEIQQYGFEVKLGKVQPPHYVDKNDPF
                     VQKLVTAYRNQTNDMTEPYTIGGGTYARNLDKGVAFGAMFSDSEDLMHQKNEYITKKQ
                     LFNATSIYLEAIYSLCVEE"
     gene            20056..20904
                     /gene="dat"
                     /locus_tag="O6Y56_000407"
     CDS             20056..20904
                     /gene="dat"
                     /locus_tag="O6Y56_000407"
                     /EC_number="2.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino-acid transaminase"
                     /protein_id="HDB5573702.1"
                     /translation="MEKIFLNGEFVSPSEAKVSYNDRGYVFGDGIYEYIRVYNGKLFT
                     VTEHYERFLRSANEIGLDLNYSVEELIELSRKLVDMNQIETGAIYIQATRGVAERNHS
                     FPTPEVEPAIVAYTKSYDRPYDHLENGVNGVTVEDIRWLRCDIKSLNLLGNVLAKEYA
                     VKYNAVEAIQHRGETVTEGSSSNAYAIKDGVIYTHPINNYILNGITRIVIKKIAEDYN
                     IPFKEETFTVDFLKNADEVIVSSTSAEVTPVIKLDGEPVNDGKVGPITRQLQEGFEKY
                     IESHSI"
     gene            21454..22245
                     /locus_tag="O6Y56_000408"
     CDS             21454..22245
                     /locus_tag="O6Y56_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001602611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HDB5573703.1"
                     /translation="MEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAAL
                     SAEGIVPKLVWTKRIETGEVVTAQHWKNGRELSSNEMKQTRVAHLLKKIHNSRPLLSM
                     LKRMEMEPITPEIMLNKINASLSREVLTHHIVRKSLTYLEEHMPSLDSRFFTVVHGDV
                     NHNNWLLSDRDELFLVDWEGAMIADPAIDIGMLLYNYVPQQQWSEWLETYGVQESLNL
                     NKRMKWYTVIQSIGLVQWYEEQKRYKDMNTWLKFLNEVMNSNMFI"
     gene            22260..22904
                     /gene="trmB"
                     /locus_tag="O6Y56_000409"
     CDS             22260..22904
                     /gene="trmB"
                     /locus_tag="O6Y56_000409"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDB5573704.1"
                     /translation="MRVRYKPWAEDYLKDHPELVDMDGQHAGKMTEWFDKTQPIHIEI
                     GSGMGQFITTLAAQNPHINYISMEREKSIVYKVLDKVKEMGLTNLKIICNDAIELNEY
                     FKDGEVSRIYLNFSDPWPKNRHAKRRLTYHTFLALYQQILNDEGDLHFKTDNRGLFAY
                     SLESMSQFGMYFTKINLNLHQEDDGSNILTEYEKKFSDKGSRIYRMEAKFHSQK"
     gene            23375..24217
                     /locus_tag="O6Y56_000410"
     CDS             23375..24217
                     /locus_tag="O6Y56_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDB5573705.1"
                     /translation="MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQI
                     NLPTHPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDID
                     YVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDY
                     SNKLILFEKHFEPVPGIKMQHSGGHSFGHTIITIESQGDKAVHMGDIFPTTAHKNPLW
                     VTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYFAVKYSDDGENLDAYILRETL
                     VDNN"
     gene            complement(24340..24651)
                     /locus_tag="O6Y56_000411"
     CDS             complement(24340..24651)
                     /locus_tag="O6Y56_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDB5573706.1"
                     /translation="MTKLKYIIPTIIAVAIVIISTISIIQFINRKRYNPVKVLNEVKS
                     YFMNVKGSYIVYEPFVHPETDKYRLVYQGGITTIKNGQNIHYDFYADAYTGEVINIVE
                     R"
     gene            24738..25814
                     /locus_tag="O6Y56_000412"
     CDS             24738..25814
                     /locus_tag="O6Y56_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HDB5573707.1"
                     /translation="MNINKKVTLQRIQTLTELHGAPGFEEEVKNYMTQQMAPYVDEFI
                     ENRMGGFFGVKKSKNPNAKRVMIAAHMDEIGFMITNITKNGMIQFTNLGGVANDIWQG
                     QRLVIKNRNGDKIIGVVSNIPKHFRTGSEGAPEIKDLTLDIGAQNEDEVRERGIDIGD
                     TIVPHTPFTQLSEHRYSAKAWDNRYGCVLAIEILELLKDIELDIDLYVGANVQEEVGL
                     RGAKASAEMIDPDVAFVVDCSPANDVKGNQPLSGELGKGTLIRIKDGTMILKPAFRDY
                     LLKLVEAHDIEHQYYMSPGGTDGGEIHKANIGIPTAVIGVCARYIHSTDSVFDIRDYF
                     AARSLLSEAICNLDNNQIETLQYK"
     gene            25879..26190
                     /locus_tag="O6Y56_000413"
     CDS             25879..26190
                     /locus_tag="O6Y56_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDB5573708.1"
                     /translation="MKQLESEQQFESLKQGATVFEFTAGWCPDCRVIEPDLPELEARY
                     PMFDFVSVDRDKFMDICIENGIMGIPSFLVYKNGELLGSYIGKERKSIEQIDAFLAQY
                     V"
     gene            26290..27147
                     /locus_tag="O6Y56_000414"
     CDS             26290..27147
                     /locus_tag="O6Y56_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1444 domain-containing protein"
                     /protein_id="HDB5573709.1"
                     /translation="MNTFQMRDKLKERLNHLDVDFKFNREEETLRIYRTDNNKGITIK
                     LNAIVAKYEDKKEKIVDEIVYYVDEAIAQMADKTLESISSSQIMPVIRATSFDKKTKQ
                     GVPFIYDEHTAETAVYYAVDLGKSYRLIDESMLEDLKLTEQQIRDMSLFNVRKLSNSF
                     TTDEVKGNIFYFINSNDGYDASRILNTAFLNEIEAQCQGEMLVAVPHQDVLIIADIRN
                     KTGYDVMAHLTMEFFTKGLVPITSLSFGYKQGHLEPIFILGKNNKQKRDPNVIQRLEA
                     NRRKFNKDK"
     gene            27176..27772
                     /locus_tag="O6Y56_000415"
     CDS             27176..27772
                     /locus_tag="O6Y56_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4479 domain-containing protein"
                     /protein_id="HDB5573710.1"
                     /translation="MNLFYNPKYVGDVAFLQIEPVEGELNYNKKGNVVEITNEGNVVG
                     YNIFEISKDITIEETGHIKLTDELVNVFQKRISEAGFDYKLNADLSPKFVVGYVETKD
                     KHPDADKLSVLNVNVGNDTLQIVCGAPNVEAGQKVVVAKVGAVMPSGMVIKDAELRGV
                     ASSGMICSMKELNLPNAPEEKGIMVLNDSYEIGQAFFE"
     gene            27793..31617
                     /locus_tag="O6Y56_000416"
     CDS             27793..31617
                     /locus_tag="O6Y56_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HDB5573711.1"
                     /translation="MSWFDKLFGEDNDSNDDLIHRKKKRRQESQNIDNDHDSLLPQNN
                     DIYSRPRGKFRFPMSVAYENENVEQSADTISDEKEQYHRDYRKQSHDSRSQKRHRRRR
                     NQTTEEQNYSEQRGNSKISQQSIKYKDHSHYHTNKPGTYVSAINGIEKETHKSKTHNM
                     YSNNTNHRANDSTPDYHKESFKTSEVPSAIFGTMKPKKLENGRIPVSKPSEKVESDKQ
                     KYDKYVAKTQTSQNKQLEQEKQNDSVVKQGTASKSSDENVSSITKSTPNYSKVDNTIK
                     IENIYASQIVEEIRRERERKVLQKRRFKKALQQKREEHKNEEQDAIQRAIDEMYAKQA
                     ERYVGDSSLNDDSDLTDNSTDASQLHTNGIENEAVSNDENKQPSIQNEDTDDTHVDES
                     PYNYEEVSLNQVSTTKQLSDDEVTVSDVTSQRQSALQHNVEVNNQDELKNQSRLIADS
                     EEDGATNKEEYSGSQIDDAEFYELNDTEVDEDTTSNSEDNTNRDASEMHVDAPKTQEH
                     AVTESQVNNIDKTVDNEIELAPRHKKDDQTNLSVNSLKTNDVNDGHVVEDSSMNEIEK
                     HNAEITENVQNEAAESEQNVEKKTIENANPKKQTEKVSTLSKRPFNVVMTPSDKKRMM
                     DRKKHSKVNVPELKPVQSKQAASESKTATQTTPSSSTDSQESNTNAYKTNNMTSNNVE
                     NNQLIGHAETENDYQNAQQYSEQKPSADSTQTETFEESQDDNQLENEQVDQSTPSSVS
                     EVSDITEESEETTHPNNTSEQQDNDDQQKDLQPTFSNQNEDTANENRPRTNQPDVATN
                     QAVQTSKPMIRKGPNIKLPSVSLLEEPQVIEPDEDWITDKKKELNDALFYFNVPAEVQ
                     DVTEGPSVTRFELSVEKGVKVSRITALQDDIKMALAAKDIRIEAPIPGTSRVGIEVPN
                     QNPTTVNLRSIIESPSFKNAESKLTVAMGYRINNEPLLMDIAKTPHALIAGATGSGKS
                     VCINSILMSLLYKNHPEELRLLLIDPKMVELAPYNGLPHLVAPVITDVKAATQSLKWA
                     VEEMERRYKLFAHYHVRNITAFNKKAPYDERMPKIVIVIDELADLMMMAPQEVEQSIA
                     RIAQKARACGIHMLVATQRPSVNVITGLIKANIPTRIAFMVSSSVDSRTILDSGGAER
                     LLGYGDMLYLGSGMNKPIRVQGTFVSDDEIDDVVDFIKQQREPDYLFEEKELLKKTQT
                     QSQDELFDDVCAFMVNEGHISTSLIQRHFQIGYNRAARIIDQLEQLGYVSSANGSKPR
                     DVYVTEADLNKE"
     gene            31641..32954
                     /locus_tag="O6Y56_000417"
     CDS             31641..32954
                     /locus_tag="O6Y56_000417"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDB5573712.1"
                     /translation="MTHYHFVGIKGSGMSSLAQIMHDLGHEVQGSDIENYVFTEVALR
                     NKGIKILPFDANNIKEDMVVIQGNAFASSHEEIVRAHQLKLDVVSYNDFLGQIIDQYT
                     SVAVTGAHGKTSTTGLLSHVMNGDKKTSFLIGDGTGMGLPESDYFAFEACEYRRHFLS
                     YKPDYAIMTNIDFDHPDYFKDINDVFDAFQEMAHNVKKGIIAWGDDEHLRKIEADVPI
                     YYYGFKDSDDIYAQNIQITDKGTAFDVYVDGEFYDHFLSPQYGDHTVLNALAVIAISY
                     LEKLDVTNIKEALETFGGVKRRFNETTIANQVIVDDYAHHPREISATIETARKKYPHK
                     EVVAVFQPHTFSRTQAFLNEFAESLSKADRVFLCEIFGSIRENTGALTIQDLIDKIEG
                     ASLINEDSINVLEQFDNAVVLFMGAGDIQKLQNAYLDKLGMKNAF"
     gene            33028..33519
                     /locus_tag="O6Y56_000418"
     CDS             33028..33519
                     /locus_tag="O6Y56_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF948 domain-containing protein"
                     /protein_id="HDB5573713.1"
                     /translation="MDWILPIAGIIAAIAFLILCIGIVAVLNSVKKNLDYVAKTLDGV
                     EGQVQGITRETTDLLHKVNRLTEDIQGKVDRLNSVVDAVKGIGDSVQTLNSSVDRVTN
                     SITHNISQNEDKISQVVQWSNVAMEIADKWQNRHYRRGSANYKANNVATDANHSYTSR
                     VDK"
     gene            33593..34792
                     /locus_tag="O6Y56_000419"
     CDS             33593..34792
                     /locus_tag="O6Y56_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000193956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573714.1"
                     /translation="MTQQQNNKRTLKNKHTYQNEPLPNRKDFVVSFITGALVGSALGL
                     YFKNKVYQKADDLKVKEQELSQKFEERKTQLEETVAYTKERVEGFLNKSKNEQAALKA
                     QQAAIKEEASANNLSDTSQEAQEIQEAKREAQAEADKSVAVSNEESKASALKAQQAAI
                     KEEASANNLSDTSQEAQEIQEAKKEAQAEADKSVAVSNEESKASALKASKEESQAERL
                     ANAAKQKQAKLTPGSKESQLTEALFAEKPVAKNDLKEIPQLVTKKNDVSETVNTDNKD
                     TVKQKEAKFEKGVITRKADEKTTNNTAVDKKSGKQSKKTTPSNKRNASKASTNKTSGQ
                     KKQHNKKSAQGAKKQSSSSKSTQKNNQTSNKNSKTTNAKSSNASKTSNAKVEKAKSKI
                     EKRTFND"
     gene            34948..35031
                     /locus_tag="O6Y56_000420"
     CDS             34948..35031
                     /locus_tag="O6Y56_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573715.1"
                     /translation="MLFVTSLDYNSDSAHFKLKMEKYSIIK"
     gene            35488..36579
                     /locus_tag="O6Y56_000421"
     CDS             35488..36579
                     /locus_tag="O6Y56_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-deoxy-7-phosphoheptulonate
                     synthase/chorismate mutase"
                     /protein_id="HDB5573716.1"
                     /translation="MSNKLESYRSEIVSLNHQILDLLSKRGELAQKIGEEKLKQGTRI
                     YDPQREKEMLNDLIDSNKGPFNDNTIKQLFKEIFKASTDLQKSENEKHLYVSRKLKPE
                     DTIVTFDNGGIIGDGNKSFVFGPCSVESFEQVEAVAKNLHAKGEKFIRGGAFKPRTSP
                     YDFQGLGVEGLKILKQIKDKYDLNVVSEIVNPNDFEVADEYLDVFQIGARNMQNFELL
                     KEAGRTKKPILLKRGLSATIEEFVYAAEYIASQGNQNIILCERGIRTYEKATRNTLDI
                     SAVPILKQGTHLPVMVDVTHSTGRKDIMLPTAKAALAVGADGVMAEVHPDPSVALSDA
                     GQQMDLDEFQAFYDELKPLADLYNAKKLK"
BASE COUNT        13729 a         5357 c         6817 g        11021 t
ORIGIN      
        1 tgaatagaaa gcaagtttat ttacacttgt agttttaagc ataagttagc acatacaagt
       61 tttgggattg ttgggatgtt tgttaatact tgtatggtgg ctaaatatgt gatcattaat
      121 tgggagatgt ttagcatgaa aaaagtaaat aacgatactg tatttgggat tttgcaatta
      181 gaaacacttt tgggtgacat taactcaatt ttcagtgaga ttgaaagcga gtacaaaatg
      241 tctagagaag aaattttaat tttactaact ttatggcaaa aaggttctat gacgcttaaa
      301 gaaatggaca gatttgttga agtcaaaccg tataagcgta ctagaacgta taataattta
      361 gttgaattag aatggattta caaagagcgt cctgttgacg atgaaagaac agttattatt
      421 catttcaatg aaaagttaca acaagagaaa gtagaattgt tgaatttcat cagtgatgcg
      481 attgcaagta gagcaacagc aatgcaaaat agtttaaacg caattattgc tgtgtaagtt
      541 taatagcata aaaagaggtt ttcattaagt tgaaaacctc tttttgttgt tggtattaat
      601 ttttcaaatg ttgactactc aatcctaaat tataaatagt atagcgcagc aaatgcttaa
      661 gaaatttttt ctatggcaca aatgaatgga gcatgattac gttggtttaa aaattgatat
      721 tgcaaaactt gcgcatgctt ttgatccaaa gtactcaagt aatcaagcaa tgcatgcttc
      781 tcaatttgtc cttcgctatg accatgatat ataacaagta cgataattcc ttcaattgac
      841 attaatgata gcaatgaatt aatagcttgg attgtcgtgt caggctttgt cacgatagat
      901 ttatcacctt taggcaaata acctaggtta aagatggttg catcaatatg acctttatgt
      961 gcatcattta tatgatgttc aatattttca tgtccatctt ttattaaaga aacatgattg
     1021 aaatccttaa ctttatcacg tgtattttcc aaagctaaat cttgaatgtc gaaaccataa
     1081 acatgtcctt ctggtacttg ttcggctaaa aataaagtgt cattgccgtt accgcaagtc
     1141 gcgtctacaa caatactttc tgatgttatg tgttgtttaa taagtgtttt tgaaaaaggg
     1201 agtatacgtt ctaatttcat tgcttcacct tagacttgta acgcaaccct tgataagaat
     1261 ttctacgtgc taattcagca tcgatgccat ttaatacttc ccatttatta acactccaca
     1321 ttggaccgac catgatatct attggaccat caccggtaat tcggtgaacg atcatttcag
     1381 ggggaatcac ttctaattga tccacaacta ggtttgtgta ttcttcttga gtcataaaag
     1441 ttaataaacc tttatcgtat tgttttacca tcggtgtacc ttttaacaaa tgaagtaaat
     1501 gaattttaat accttgtaca tccatttgtg caacttcttt ggcagtagcc atcatcatgt
     1561 catagtcttc gccaggtaag ccattaatga tgtgtgtaca tacattgata ttatgcttac
     1621 gtaattttgc cacaccatca taataagttt tcatatcatg ggcacgattg attaaatcag
     1681 atgttgattg atggattgtt tgtagtccta attcaaccca taagtatgtt cgttgattca
     1741 aatctgctaa atattcgaca acatcgtctg gtagacagtc aggacgcgta ccaatagata
     1801 atcccacaac acccggttct ttaagtacag gttcgaattt ttcttttaat acttcaactg
     1861 gtgcatgtgt atttgtaaat gcctgaaaat aagcaatata ttttccttcg tgccatttct
     1921 catgcatctt ttccttaatt tctttaaatt gtactgcgat tgaatctgca cgattacctg
     1981 caaagtctcc gctacctgca gcagaacaaa atgtacatcc accatgtgct acagtgccat
     2041 cgcggttagg acagtcaaac ccgccatcca atgcaacttt aaatattttt tgtccaaatt
     2101 tattttttaa atggtaattc catgtgtgat aacgtttgtt ttcaaaagcg tattggaaat
     2161 gattgcccat atgtcatttt cctttctata aaaaaagagt tctaagtaca gattttaaca
     2221 tattttaatg ttatagtgtt tattatagtt tgacaaaaaa gagagaggaa ctatgaaata
     2281 tgaatatacc taaatcagtc tggtggctag taattggcat ggcgttaaat attactggtt
     2341 ccagtttttt gtggccttta aatacaattt atatgaaaca agaacttgga aaaagtttaa
     2401 ctgttgctgg tttagtgcta atgataaatt catttggcat ggttattgga aacttattag
     2461 gtggttcact atttgataaa ttaggtggat acaagacgat tttaattgga actttcactt
     2521 gtctttgtag tacaacgcta cttaatttct ttcacgggtg gccttggtat gctgtatggc
     2581 ttgtaatgtt aggctttggt ggcggaatga ttattcctgc gatatacgca atggctggag
     2641 cagtgtggcc gaatggcgga aggcaaacgt ttaatgcgat atacttagcg caaaatattg
     2701 gtgtggctgt cggcgcagca atgggcggct ttgtcgcaga atttagcttt aactatatct
     2761 ttttagccaa tcttattatg tatgttgtgt ttgcgcttgt cgcggtaacg caatttaata
     2821 ttgaaattaa tgcgaaagtt aaatatccaa ctcatttaga tattactggt aaaaagaata
     2881 aagcaagatt tatttcatta gtactaattt gtgcaatgtt tgcaatttgt tgggttgcgt
     2941 atattcaatg ggagtctaca atcgcatcat ttacacaatc tattaatatt tcaatggcac
     3001 aatatagtgt tttatggaca attaacggaa taatgatttt agtagcacaa ccattaatta
     3061 aaccgattct ctatctgtta aaaggaaact taaagaagca aatgtttgtc ggcatcatca
     3121 tttttatgtt gtcgttcttt gttacgagct ttgccgaaaa ctttacaata tttgttgtcg
     3181 gtatgattat tttaactttt ggagaaatgt ttgtatggcc agcagttcca actatagcca
     3241 atcagttagc gccagatggt aagcaaggac agtaccaagg ttttgtgaat tcagctgcta
     3301 cagtaggaaa ggcattcggt ccatttcttg gtggtgtatt agttgatgcg tttaatatgc
     3361 gcatgatgtt tatcggtatg atggtactac ttgtatttgc attaatatta ttaatgattt
     3421 tcaaggagaa taatacgcaa cctaaaaaaa tagatgcata atgagtaaat agaattaacg
     3481 ttatagactt gaaataaatg tcgttataac ataatattaa tttgtataat ttaatttcgt
     3541 ttggagcttt tctacagaaa gctagtgatg ctgagagcta gtgttaagga ctaaatgtaa
     3601 atcgtaataa ttttaaattg aatgaatgac atctcttact attaaaatga gtgcacaatt
     3661 tttgtgaaat agggtggtaa cgcggcaaat gtcgtcccta tgtaaataga atagttagag
     3721 gtgtcttttt ttattgaata ggaggaaatg tgttgaatta caaccacaat caaattgaaa
     3781 agaaatggca agactattgg gacgaaaata aaacatttaa aacaaatgat aacttaggtc
     3841 aaaagaaatt ttatgcttta gacatgtttc catatccatc aggtgctggt ttacatgttg
     3901 gacatcctga gggctataca gcaacagata tcatttcaag atataagaga atgcaaggat
     3961 ataatgtgtt acatccgatg gggtgggatg cattcggatt accagcagag caatatgctt
     4021 tagacacagg caacgaccca cgtgaattta caaagaaaaa tatccaaact tttaaacgac
     4081 aaattaaaga attagggttc agttatgatt gggatcgtga agttaataca acagatccag
     4141 aatactataa atggacacag tggattttca tacagttata taacaaaggt ttagcatacg
     4201 ttgatgaagt tgcagttaac tggtgtccag cattaggtac tgttttatct aacgaagaag
     4261 tgattgatgg tgtctctgaa cgtggtggac atccagttta tcgtaagccg atgaaacaat
     4321 gggtacttaa aatcacagaa tatgcagatc aattattagc agatttagat gatttagatt
     4381 ggcctgagtc tttaaaagat atgcagcgca attggattgg acgttctgaa ggggccaaag
     4441 tttcatttga tgtagataat acggaaggaa aagtagaagt atttacgact agaccagata
     4501 caatctatgg tgcatcattc ttagtcttaa gtcctgaaca tgcattagtt aattcaatta
     4561 caactgatga atataaagaa aaagtaaaag cttatcaaac agaagcttct aaaaagtcag
     4621 atttagaacg tacagattta gcaaaagata aatcaggtgt gtttactggt gcatatgcaa
     4681 ttaatccttt atctggtgaa aaagtacaaa tttggattgc tgattatgta ttatcaacat
     4741 atggtactgg agcaattatg gcagtaccag cgcatgatga cagagattat gaatttgcta
     4801 aaaagtttga tttgccaatc attgaagtca tcgaaggtgg taatgttgaa gaagcagcat
     4861 acactggtga aggtaaacat attaattctg gtgaacttga tggtttagaa aatgaagcgg
     4921 caattactaa agctattcaa ttattagagc aaaaaggtgc tggcgaaaag aaagttaatt
     4981 acaaattaag agattggtta ttcagtcgtc agcgttattg gggcgaacca attcctgtca
     5041 ttcattggga agatggaaca atgacaactg ttcctgaaga agagctacca ttgttgttac
     5101 ctgaaacaga tgaaatcaag ccatcaggga ctggtgagtc tccactagct aatattgatt
     5161 catttgtaaa tgttgtagat gaaaaaacag gtatgaaagg acgtcgtgaa acaaatacga
     5221 tgccacaatg ggcaggtagt tgttggtatt atttacgtta catcgatcct aaaaatgaaa
     5281 atatgttagc agatcccgaa aaattaaaac attggttacc tgttgattta tatatcggtg
     5341 gagtagaaca tgcggttctt cacttattat atgcaagatt ttggcataaa gtcctttatg
     5401 atttgggcat cgtacctact aaagaacctt tccaaaaatt atttaaccaa ggtatgattt
     5461 taggagaagg taatgagaag atgagtaaat ctaaaggaaa tgtaatcaat cctgatgata
     5521 tagtacagtc tcatggtgca gatactttac gtctttacga aatgtttatg ggacctttag
     5581 atgctgcaat tgcatggagt gaaaaaggct tagatgggtc tcgtcgattc ttagatcgcg
     5641 tatggcgttt aatggtaaat gaagatggaa cattgagttc aaaaattgta actacaaata
     5701 ataaatcttt agataaagtt tataaccaaa ctgttaaaaa ggtaacagaa gactttgaaa
     5761 cattaggatt taatactgct attagtcaat taatggtatt tattaatgag tgttataaag
     5821 ttgatgaagt ttataaacct tacattgaag gcttcgttaa aatgttagca cctattgcac
     5881 cacatatcgg tgaagaatta tggtcaaaat taggacatga agagtctatt acgtaccaac
     5941 cttggccaac ttatgacgaa gcactacttg tagatgatga agtagaaatc gttgttcaag
     6001 ttaatggtaa attgagagct aaaattaaaa ttgctaaaga tacatcaaaa gaagaaatgc
     6061 aagaaattgc cttatctaat gacaatgtta aagcgagtat tgaaggtaaa gacatcatga
     6121 aagtcatcgc tgttcctcaa aaattagtca atattgtagc taaataatgt tttaaggagg
     6181 actttaaaat gaagtcaatt actacagatg aattaaaaaa caaactttta gaatctaaac
     6241 cagttcaaat tgttgatgtt cgtactgaag aagaaacagc aatgggatat attcctaatg
     6301 caaagttaat tccaatggat accattccgg ataatttaaa ttcatttaat aaaaatgaaa
     6361 tatattatat tgtatgtgct ggtggagttc gaagcgctaa agttgtagaa tatttagagg
     6421 caaatggcat tggtgccgta aatgtcgaag gcggcatgca cgcttggggc gatgaaggtt
     6481 tggaaataaa aagtatttaa agtagtgaca taaattaaaa taatattaca tttgtaatga
     6541 caccaagtaa cgtttcggtt gcttggtgtt ttttggtatg aattgctttc agtcacaaaa
     6601 caatctaaag cgttcttgtt atgttttatt aagattttaa ttacaaaacg gaaactaaat
     6661 tgtaataaaa taaaacttta ttttataaaa tgatgatgat aaaattgagt gaacttaaaa
     6721 tattgtacaa aataatatag ctataaacat aatatgagag agcgtatatt tttagcataa
     6781 ttctaaacaa cacagcagag aacagacaac caggaggaaa atgaaatgaa tttgttaaag
     6841 aaaaataaat atagtattag gaagtataaa gtaggcatat tctctacttt aatcggaaca
     6901 gttttattac tttcaaaccc aaatggtgca caagccttaa ctacggataa taatgtacaa
     6961 agcgatacta atcaagcaac acctgtaaat tcacaagata caaatgttgc taataataga
     7021 ggtttagcaa atagtgcgca gaatacacct aatcaatctg caacaaccaa tcaatcaacg
     7081 aatcaagcat tggttaatca taataatggt agtatagcaa atcaagctac gccaacatca
     7141 gtgcaatcaa gtacgccttc agcacaaaac aataatcata cagatggcaa tacaacagca
     7201 actgagacag tgtcaaacgc taataataat gatgtagttt cgaataatac cacattaaat
     7261 gtaccaaata aaacaaatga aaatggttca ggaggacatc taactttaaa ggaaattcaa
     7321 gaagatgttc gtcattcttc tgataaacca gagctagttg caattgctga acaagcatct
     7381 aatagaccga aaaagagaag tagacgtgcg gcacctgcag atcctaatgc aactccagca
     7441 gatccagcgg ctgcagcggc taatggcact gcgtcagctg gaaatacagc gacgtatacg
     7501 ccaacaactg atccaaatgg aaataatgtt gggcaaaatg cacctaatga agtgctatca
     7561 tttgatgaca atagtattag accaagtacc aaccgctcag taccatcagt aacagtggtt
     7621 gataatttac caggctttac tcttatcaat ggtggtaaag taggtgtgct aagtcatgcg
     7681 atggtaagaa caaacatgtt tcaggctggg agcaatagaa cctatcaggc acaaggcaat
     7741 gtacttgcat taggacgtat aagcggaact gatactagta atcatggaga ttttaatggt
     7801 attgaaaaat cattaacagt aaatccaaat tctgaattaa tctttgaatt taatactatg
     7861 ccaactaaaa acggtcaagg ggcaacaaat gtcattatta aaaatggtgc cactaacgat
     7921 acgattgctg aaaagactat tgaagacgga ccaactttac gattattcaa agtaccagat
     7981 aatgtaaata gccttaaaat ccaatttgta cctaaaaatg atgcaattac agatgcaaac
     8041 ggaatttatc aactaaaaga tggttacaaa tactatagct ttgttgactc tatcggactt
     8101 cattctgggt cacatgttta tgttgaaaga cgaacaatgg aaccgacagc aacaaataat
     8161 aaagaattta ctgttacaac atcactaaaa aataacggta attctggtgc ttcttttgac
     8221 acagatgaat ttgtttataa aattcaatta cctgaaggtg ttgaatatgt gaataattct
     8281 ttaactaaag attttccaag cagtaattca ggtgttgata tgaatgattt taatgtgacg
     8341 tatgatgcgg cgaatcgagt gataacaata aaaagtactg gtggaggtac agcgaactcc
     8401 ccagcaagac taatgcctga taaaatattg gatttaaagt ataagttgcg tgttaataat
     8461 gttccaacac caagaaaagt aacatttaac gatacattaa catataagac atatacacaa
     8521 gattttatta attcacctgc tgaaagtcat actgtaagta ctaatccata tacaatcgat
     8581 atcataatga ataaagacgc attacaaggt gaagttgata gacgaattca acaagcagat
     8641 tatacatttg cctcattaga tatttttaat gctctcaaaa gacgtgcaca aacaatttta
     8701 gatgaaaatc gtaacaatgt tccattagat caaagagtat ctcaagcaga tattgataca
     8761 ttaactaatc aaatgcaaca cacgttaatt cgaagtgttg atgatgaaaa tgcagtaaat
     8821 caaaaagctg atcaaatgca agatttaatt aaccaaaatg atgaactgac agatgaagaa
     8881 aaacaagcag cgaatcaaat tatcgaggaa cacaaaggca atattattgg tgatattggt
     8941 gaccaaacga ctggtgatgg cgttactaga attaaagatc aaggtataca gaccttaagt
     9001 ggtgatactg caacaccggt tgttaaacca aatgctaaaa aagctatacg tgataaagca
     9061 gcgaaacaaa gagaaattat caataacaca ccagatgcta ctcaagatga aattcaagat
     9121 gcattaaatc aattaacaac ggatgaaaca gatgctattg ataatgttac gaatgctact
     9181 accaatgatg atgttgaaac agctaaaaat aatggcatca atactatagg agcagttgtt
     9241 cctcaagtga cacataaaca agctgcaaga gatgcaatta accaagcaac agcaacgaaa
     9301 agacaacaaa taaataataa tagagaagca acgcaggaag agaaaaatgc agcattgaac
     9361 gaattaactc aagcaaccaa ccatgcttta gaacaaatta atcaagcaac aacaaatgct
     9421 gatgttgata acgccaaagg tgatggtcta aatgccatta atccaattgc tccggtaact
     9481 gttgttaagc aagctgcaag ggatgccgta tcacatgatg tacaacaaca tatcgcagag
     9541 atcaatgcta atcctgatgc gactcaagaa gaaagacaag cagcaattga caaagtgaat
     9601 gctgctgtaa ctgcagcaaa tacaaacatt ttaaacgcta ataccaatgc tgatgttgaa
     9661 caagtgaaga caaatgcgat tcaaggaata caagcaatta caccagctac aaaagtaaaa
     9721 acagatgcaa aaaatgccat cgataaaagt gcggaaacgc aacataatac gatatttaat
     9781 aataatgatg cgacgctcga agaacaacaa gcagcacaac aattacttga tcaagctgta
     9841 gccacagcga agcaaaatat taatgcagca gatacgaatc aagaagttgc acaagcaaaa
     9901 gatcagggca cacaaaatat agttgtgatt caaccggcaa cacaagttaa aacggatgct
     9961 cgaaatgctg taaatgataa agcgcgagag gctattacga atatcaatgc tacaccaggt
    10021 gcgactcgag aagagaagca agaagcgata gatcgtgtaa atacacttaa aaatagagca
    10081 ttaactgata ttggtgtgac gtctactact gcgatggtca atagtattag agacgatgca
    10141 gtcaatcaaa tcggcgcagt tcaaccgcat gtaacgaaga aacaaactgc tacaggtgta
    10201 ttaaatgatt tagcaactgc taaaaagcaa gaaattaatc aaaacacaaa tgcaacaact
    10261 gaagaaaagc aagtggcttt aaatcaagtg gatcaagagt tagcaacggc aattaataat
    10321 ataaatcaag ctgatacaaa tgcggaagta gatcaagcgc aacaattagg tacaaaagca
    10381 attaatgcga ttcagccaaa tattgttaaa aaccttcagc attagcacaa atcaatcagc
    10441 attataatgc taaattagct gaaatcaatg ctacaccaga tgcaacgaat gatgagaaaa
    10501 atgctgcgat taatacttta aatcaagaca gacaacaagc tattgaaagt attaaacaag
    10561 ctaacacaaa tgcggaagta gaccaagcta cgacagtggc agagaataat atcgatgctg
    10621 ttcaagttga cgtagtaaaa aaacaagcag cgcgagataa aatcactgct gaagtggcga
    10681 agcgtattga agcggttaaa caaacgccta atgcaactga tgaagaaaag caggctgctg
    10741 ttaatcaaat caatcaactt aaagatcaag catttaatca aattaatcaa aaccaaacaa
    10801 atgatcaggt agacgcaact acaaatcaag cgataaatgc tatagataat gttgaagctg
    10861 aagtagtaat taaaccaaag gcaattgcag atattgaaaa agctgttaaa gaaaagcaac
    10921 agcaaattga taatagtctt gattcaacag ataatgagaa agaagttgct tcacaagcat
    10981 tagctaaaga aaaagaaaaa gcacttgcag ctattgacca agctcaaatg aacagtcagg
    11041 tgaatcaagc agcaacaaat ggtgtatcag caattaaaat tattcaacct gaaactaaag
    11101 ttaaaccagc tgcacgtgaa aaaatcaatc aaaaagcgaa tgaattacgt gcgaagatta
    11161 atcaggataa agaagcgaca gcagaagaaa gacaagcagc actagataaa atcaatgaat
    11221 ttgtaaatca agccatgaca gatattacga ataatagaac aaatcaacaa gttgatgata
    11281 caactagtca agcgcttgat agcattgctt tagtaacgcc tgaacatatt gttagagctg
    11341 gtgctagaga tgcagttaag caacaatatg aagctaaaaa gcaagaaatt gagcaagctg
    11401 aacatgcgac tgatgaagaa aaacaagttg ctttaaatca attagcgaat aatgaaaaac
    11461 tcgcattaca aaacatcaat caagcagtaa cgaataatga tgtgaaacgt gttgaaacaa
    11521 atggcattgc tacactaaaa ggtgtacaac ctcgtattgt aattaagcct gaagcacaac
    11581 aagcaataaa agcaagtgca gaaaatcaag tagaattaat aaaagataca ccacatgcaa
    11641 cagttgatga attagatgaa gcgaatcaat taattagcga cacactcaaa caagcacaac
    11701 aagaaataga aaatacaaat caagatgctg ctgttactga tgttagaaat caaacaataa
    11761 aggcaataga gcaaataaaa cctaaagtaa gacgtaaacg agctgcgctt gatagcattg
    11821 aagaaaataa taaaaatcaa ctcgatgcaa tccgaaatac gttggatact actcaagatg
    11881 aaagagatgt tgctattgat actttaaata aaattgtaaa tacaattaaa aatgacattg
    11941 cacaaaacaa aacgaatgca gaagtggatc gaactgagac tgatggcaac gacaacatca
    12001 aagtgatttt acctaaagtt caagttaaac catcagcgcg tcaatctgtt ggtataaaag
    12061 ccgaagctca aaatgcacta atcgatcaaa gcgatttatc aactgaagaa gaaagactag
    12121 ctgctaaaca tttagtagaa caagcactta atcaggctat tgatcagatc aatcatgcag
    12181 ataagactgc tcaagttaat caagatagta taaatactca aaatattatt tcaaaaatta
    12241 aaccagcgac aacagttaaa gcaacagcat tacaacaaat tcaaaatatc gctacaaata
    12301 aaattaattt aattaaagca aataacgaag cgacagatga agaacaaaat gctgcaattg
    12361 cccaagttga aaaagagtta attaaagcta aacaacaaat tgctagtgca gtgactaatg
    12421 ctgatgtggc atatttattg catgatgaga aaaacgaaat tcgtgaaatc gaacctgtta
    12481 ttaacagaaa ggcgtctgct cgagaacaat tgacaacatt attcaacgat aaaaaacaag
    12541 caattgaagc gaatatacaa gcaacggtag aagaaagaaa tagtatatta gcacagttac
    12601 aaaatattta tgacactgct attggacaaa ttgatcaaga tcgtagcaat acacaagttg
    12661 ataaaacagc atcattaaat ctacaaacaa tacatgattt agatgtacat cctattaaaa
    12721 agccagatgc tgaaaaaacg attaatgatg atcttgcacg cgtcactgat ttagtgcaaa
    12781 attatcgaaa agtaagtgat cgtaataagg ctgatgcatt aaaagctata actgcattaa
    12841 aattacaaat ggatgaagaa ttaaaaacag cacgaactaa tgctgatgta gatgcagttt
    12901 taaaacgatt taatgttgca ttaggcgata tagaagcagt aattactgaa aaagaaaata
    12961 gcttactgcg cattgataac attgctcaac aaacatatgc gaaattcaaa gcgatcgcaa
    13021 caccagaaca attagctaaa gtaaaagtat taattgatca atatgttgca gatggcaata
    13081 taatgattga tgaagatgcg acattaaatg acatcaaaca acatacgcaa ttcattgttg
    13141 atgaaatttt agcaattaaa ttaccagctg aagcgacgaa agtatcacca aaagtaattc
    13201 agtcagctcc aaaagtttgt acgcctatta aaaaagaagc gacacataaa ccacgcaaag
    13261 ttgacaaaga acttccaaat acaggttctg aaggaatgga tttaccattg aaagaatttg
    13321 cactgattac aggtgcggct ttgttagcta gaagacgtac taaaaacgaa aaagaatcat
    13381 aattaacgaa atgaccttaa tataacgaca ctttttagtg aatcggttat attaaggtca
    13441 tttttaattg aatgaaaaag ttgatctaca aaagagaatc gaaccaaatt ttatactatt
    13501 attccattga tgcatgtgag taatgaccgg catataatcc agcgacatgt cctgttacga
    13561 gtgcacttgt aatattataa ccaccagtat aaccatgaat atctaatact tcaccacata
    13621 aaaataatcc cgggactaat ttagacatca ttgttttagg ttgaatttct ttaagtgaca
    13681 cgccaccgcc tgtgacaaat gccttatcta taggtaatgt cccgtttacc ttaaattcaa
    13741 accctttaaa cgtatttact aagtcgttca attgttgatt tgataagtga tgtgatgtgg
    13801 tattttcatc gattccagct tgttccagca tgaacagtaa atagcgctct tcaattagtc
    13861 catgcaagct gtttttaatg attttatctg gtgtgtccga taataatgat gtgatgtgtt
    13921 gttttaattg ttcatggttt aattcaggaa atgcatcgat tgccatagaa atatgctgtg
    13981 tcttttgatt tttttgttct ttataaacaa actgactaca tcttaatgta gctggaccac
    14041 tgataccaaa atgagtaaat aacatatcca tttgatgact gatgcgtttt ttaccatttt
    14101 tcttaagtac tgacaattca acatctttta aacttaaacc ttttagacga ttggatttga
    14161 tgaaaggttc agctgatgta attggaactt cggtcgggaa taactctgta atggtatgac
    14221 ctaaaccttg tgcgaactta taaccatcac cagttgaacc tgtttgaggg acacttgtac
    14281 cacctgtagc aatcacaagt gaatgactta catagctgct gctttgagta tgtacagtga
    14341 aagtttggtc tgtattaact tcgattctac taacagcttc ttcttcttta atcgttacat
    14401 gttggcgttc gatagttgtc actaatgtat caaccacgtc ttgtgctttg ttggagactg
    14461 gaaacatacg cccgtgatct tcttctttta atttaacacc cctagactca aaaaaatcta
    14521 tgatggattc attatcaaaa attgaaaagg gactatataa aaatttccca tttccaggaa
    14581 tgttcttaat aatttcagca tatggtaatc gattagttac gttacatcta ccgccaccag
    14641 atattttgag tttacgacct agacctttct ttttttcaat gagtaacaca ttgctacttt
    14701 gttcgcttgc agctactgcc gccattaagc cgctaggtcc gccaccgata ataattgttt
    14761 gatacatata cgcttcctcc aaatttgtta ctggacattc aattgctatt ttatagtact
    14821 tttttaaact ttgctatatc tcttgtgtta tgagatgaca attatgttga atatatttat
    14881 aatgtgaact tcataaaaat tgaagatgta tgtgtatgat aagaatgatt tttctactgt
    14941 tatgcgatgt tcatctcaaa tagtagtata atgtttatat gaaatttcgt aatattctaa
    15001 tcaaaatcga gtattcaatg acaatgcgtt gataattttg ttatgataat tcattgaata
    15061 tacgacaatg aaataaagtt ttgtgatata ttcataataa tgaaaaatga ttttacaaag
    15121 aaatagcttt tagtttacaa aactttaata aacatgagat agggagattc gtaatgagtg
    15181 aaagtaaaga aatggtgcgt ggaacctttt taattaccat tagtatatta attaccaagg
    15241 tattgggcgt actttttatc attccattca actatttaat tggtggacaa gaaaatatgg
    15301 cgccgttcac atacgcttat gcaccatata atattgcaat tgcagttgcg acagcaggtg
    15361 taccattagc agcttcgaaa tatgttgcga aatataatgc tattggggca tataaagtca
    15421 gtcagaaatt ttataaatcg agttttattg taatgagtat taccggtgtt ttaggtttct
    15481 tggtactgta tttcctagca ccttatattt ctgaattaac attagctaga aatgttcatg
    15541 ataaaaacgg ttggtcagtc gatgatatta cttggattat aagaatcatt agtatggttg
    15601 ttatctttat tcctgtatta gcgacatgga ggggtatatt ccaaggttat aaatctatgg
    15661 ggccaacagc agtgtcagaa gtaactgagc aaattgcacg cgtgattttc atattaattg
    15721 gaagttattt agtactaaat gtctttgatg gttctatttt attagccaat ggtattgcta
    15781 cttttgcagc agcagttggt gcgattattg gtatattcac actctggtat tactggagaa
    15841 agcgtaagca taatattgat cgtatggtcg aatctgatta cacagatata gatgtgtcat
    15901 atggcaagat gtataaagaa attattgctt atagtattcc gttcgttatt gtaagtttga
    15961 attacccatt atttaactta gtagatcaat ttacacataa cggtgcttta tctttagttg
    16021 gtataccttc acagttacaa gatatattct ttaatatgtt aaatatgtca actaataaaa
    16081 ttgtaatgat tccgacatca ttaagtgctg gctttgcagt aagtttaatt ccttatatta
    16141 ctaaaacatt tgcagaaggt cgcttacatg aaatgcatca tcaaattaga acatctattg
    16201 gtgtattaat gtttataact gttccagcta gtattggaat tatggccttg gcacaaccat
    16261 tattcacagt tttctatggt tacgatccaa ttgtattagg tcatgaccct aaccatgatg
    16321 gtagtcgttt attattctat tatgcgcctg tagcaatact aatttcacta ttaagtgtaa
    16381 cggcatcaat gttacaaggt atagataaac agaaattaac agtttatgtt attttagctt
    16441 ctgtagttat caagttagcg ttaaactatc cattaattat gttattccat acacctggtg
    16501 caattttaag tactagtatc gcattattat ttgcaattgg atgtaatttc tatattctta
    16561 aaaaatatgc gaagtttaaa ttcagctata gttggattca ttttgcaaaa atattcttgt
    16621 attcatttat tatgatgcta ggtgtagaat tagtgttctt ccttgcaaat ctattcttag
    16681 aacctactaa acttggttac ttaatcatta ttattttagg tgttacagta ggtattctaa
    16741 tttacggtac aatcacaatt aaaacgcgtt ttgcggacga atttttaggt gaaattcctg
    16801 aaaaattaag acgtagagtt aggtttttac gatgagaata gataaatttt tagcaaatat
    16861 gggcgtcggt acacgtaatg aggtcaaaca gttacttaaa aaaggccttg taaatgtcaa
    16921 cgaacaagta attaaatcac caaaaacaca tatagaacca gaaaacgata tgatatcagt
    16981 tcgtggagaa ttaatagaat acgttgaaaa tgtctatatt atgttaaata agccaaaagg
    17041 ttatatatcg gcaactgaag atcatcattc aaaaaccgtt attgatttaa tacctgaata
    17101 ccaacatcta aatatttttc cggttggtcg tcttgataaa gatacagaag ggcttttatt
    17161 gataacgaat gatggtgatt ttaatcatga attaatgagt ccaaacaaac atgtttctaa
    17221 aaaatatgaa gttatttcag caaatcctat cactgaagac gacattcaag cttttaaaga
    17281 aggtgtaaca ctgtctgatg gcaaggttaa gcctgcaata ttaacttata ttgataatca
    17341 aacgtcacac gtaacaattt atgaaggaaa atatcatcaa gttaaacgaa tgtttcatag
    17401 cattcaaaat gaggtattac atttaagacg tatcaaaatt gctgatttag aattggacag
    17461 caatttagat tcaggagaat atcgtttatt aactaaaaat gattttgaca aattaaatta
    17521 taaataaaag ggagacgatt gatatggcaa aaggtaattt atttaaagcg attttaggta
    17581 taggtggcgc tgtagcagct gtacttgtta cacgtaaaga tagtcgtgac aagctgaaag
    17641 cagaatataa taaatataaa caagatcctc aaagctataa agataatgct aaggataaag
    17701 cgacgcaatt aggaacaatt gctaatgaaa caattaaaga agtaaaaaca aatccgaaag
    17761 aatatgctaa tagattaaaa aataatccaa aagcattttt cgaagaagaa aaatcaaaat
    17821 ttaccgaata tgacaataag actgacgaaa gtattgaaaa aggtaaattt gatgatgaag
    17881 gtggcgcagc accaaataat aatttacgta tcgtcactga agaagattta aaaaagaata
    17941 aaaatgcatt atctgataaa gaataagatg tgagtaagac agaaatgata agggagtggg
    18001 acagaaatca tattttcgca aaatttattt cgtcgtccca ccccaacttg cacattattg
    18061 taagctggct ttccgccagc tactatgttg gggccccgcc ggcaaggttg actagaattg
    18121 aaaaaagctt gttacaagcg tattttcatt cagtcaacta ctgccaatat aatattgtaa
    18181 actataggac atttattagt gtttcaggtt ctttatcgtt agtcatagct aatatgcata
    18241 tagaaagaag aatacatgag tgaaattcat gcataagaaa tactaatatc taaagaaagc
    18301 gtatttcttt atcttttaga aattctctat gttgggcccg ccaacttgca cattattgta
    18361 agttgactat tggccagctt ctgtgttgtg gccccggggc gcattttctt tcagttaatt
    18421 actgtcaata ttaaattgtg tgcctagcac attgacttat atctcgagct cttgatttaa
    18481 atatataaat taaaaaagga acaaagcagc tattaataat ttgtgtcata tcgatagcat
    18541 cgttttgttc ctttttatta ttttctgaca tcttattgta gtttttatat catttcatgt
    18601 aaaatagagt ttaacttata gaaaaaagga agtcgatttc gaatgtggaa agaaaaagtt
    18661 caacaatacg aagatcaaat cattaatgac ttaaaaggat tattagcaat tgaaagtgtg
    18721 agagatgatg caaaagcatc agaagacgca ccagttggtc caggtcctcg taaggcatta
    18781 gactacatgt atgaaattgc acatagagat ggatttacaa cacatgatgt ggatcatatt
    18841 gcaggaagaa ttgaggcagg taaaggaaat gacgtattag gtatcttatg tcatgttgac
    18901 gttgttcctg ctggtgatgg atgggatagt aatccgtttg agccggttgt aacagaagat
    18961 gctatcatag ctagaggtac acttgatgac aaaggtccaa caattgctgc ttattatgca
    19021 attaagatat tagaagatat gaatgtggat tggaagaaac gtattcatat gattattggt
    19081 acggatgaag aatctgattg gaaatgtacg gatcgctatt ttaaaacaga agaaatgcca
    19141 acattaggtt ttgcaccaga tgcagaattt ccgtgtattc atggtgaaaa aggcattaca
    19201 acatttgact tagttcaaaa taaacttact gaagatcaag atgaacctga ttatgaatta
    19261 ataactttta aatctggtga acgttacaac atggtgcctg atcatgcaga agcaagagtg
    19321 cttgttaaag aaaatatgac agatgttatt caagactttg agtacttttt agaacaaaat
    19381 catttacaag gtgatagcac tgttgatagt ggcattctag ttttaacagt tgaaggtaaa
    19441 gcggttcatg gtatggatcc atctatcggt gtgaatgcgg gtctttactt actaaaattc
    19501 ttagcatcat taaatcttga taataatgca caagcgtttg tagcatttag taatcgctac
    19561 ttatttaatt cagattttgg tgaaaagatg ggaatgaaat tccatacaga tgtcatgggt
    19621 gatgtgacaa ctaacattgg tgttattaca tatgataatg aaaatgcggg tcttttcggt
    19681 atcaacttac gctacccaga aggatttgaa tttgaaaaag ctatggatcg ttttgcaaat
    19741 gagattcaac aatatggctt tgaagtgaaa ttaggtaaag tccaaccacc acattatgtt
    19801 gataaaaatg atccttttgt acaaaagtta gttactgcat atagaaatca aacaaatgat
    19861 atgactgaac cttatactat aggtggcggt acttatgcga gaaacttaga caagggtgta
    19921 gcatttggcg caatgtttag tgattctgaa gatttaatgc atcagaaaaa tgaatatatc
    19981 actaaaaaac agttatttaa cgcaactagt atttacttag aagcaattta ttcattatgc
    20041 gtggaggaat aatatatgga aaaaattttt ttaaatggtg agtttgtaag tccaagtgaa
    20101 gcaaaggttt catacaacga cagaggatac gtatttggcg atggtattta tgaatacatt
    20161 cgcgtatata atggtaagtt atttacagta acagaacatt atgaaagatt tttacgtagt
    20221 gccaatgaga ttggtttaga tttaaattat tctgtagaag aattaattga actatctcgt
    20281 aaattagttg atatgaatca aattgaaact ggggcaattt atattcaagc aacgcgtggt
    20341 gtagctgaaa gaaatcatag cttcccgaca cctgaagtag aaccagcaat tgttgcttat
    20401 acaaagagtt atgatcgtcc ttatgatcat ttagaaaatg gtgtgaatgg tgttaccgtt
    20461 gaagatatcc gatggttacg ttgcgacatt aaaagcttga acttattagg aaatgtatta
    20521 gcaaaagaat atgctgtgaa atataatgca gttgaagcaa ttcaacatcg aggcgaaact
    20581 gtaactgaag gatcttcaag taatgcttat gcaattaaag acggtgtgat ttatacacat
    20641 ccgattaaca actatattct taatggtatt acacgaattg taattaaaaa aattgccgaa
    20701 gactataaca tcccatttaa agaagaaacg tttactgtag atttcttgaa aaacgcagat
    20761 gaagttattg tttcaagtac ttcagctgag gttacacctg ttattaaatt agatggtgaa
    20821 ccagttaatg atggtaaagt tggcccaatt acacgtcaac tacaagaagg atttgaaaag
    20881 tatatagagt cacacagtat ttaaaattct ttcatcatat ttttagatta aattacttaa
    20941 atttatcaac tttcgtaagt gaattatgtt ataatttaaa acgaagctta aaagtgttgt
    21001 ttagaaaaca catattagta aaaagtgcca ttttgtttct cattttcagt tgaaatataa
    21061 tgataaaaat tataaaattt tctatgagtt acaaatatga tgtgcatcat attttactaa
    21121 gtacgtaaat gttacagttc ataaatttat gctaaccatg aaaatgggat agtaattatt
    21181 ttgaaaacta gagtttatcg cctacaaaga ttcaaaaaca tgtagtttta gacacggtaa
    21241 cattatatgt tatggaagcg actttagaag gtatggtgtc aatgacagac atattgattt
    21301 aatttaagtt gtttaaagta ggcattagtt gaggatttac aataattatc tggacataat
    21361 atttgtacca gtatggtgtt ataaattaga atatatggct cttgaaaaac ctatttctag
    21421 agccattttc taattgaaag tgaggtggac gagttggagc agttttatca attagggtgg
    21481 acacttgatt ctgcaggtgg tgcatctggc gaagcatata tggctgaaca agatggacaa
    21541 aagttgtttt taaaacgaaa ttcaaatcca tttattgcgg cattatcagc agaaggtatt
    21601 gtgcccaaat tagtatggac gaagcgcata gaaacaggcg aggttgttac agcacaacat
    21661 tggaaaaatg gccgtgaact atcttcaaac gaaatgaagc aaacaagagt tgcacattta
    21721 ttaaagaaga tacacaattc tagaccttta ttaagtatgt taaagcgtat ggaaatggaa
    21781 cccattactc ctgagattat gcttaataaa attaatgcct ctttatcaag agaagtttta
    21841 acacatcata ttgtgagaaa atcattaacc tatttggaag agcatatgcc gagtttagat
    21901 tcacgctttt tcacagttgt acatggtgat gtgaatcata ataattggtt attatctgat
    21961 cgtgatgaac tgtttttagt cgattgggaa ggcgcaatga ttgcagaccc ggcaattgat
    22021 atcggaatgc tgctttacaa ctatgttcca caacaacaat ggtctgaatg gcttgaaaca
    22081 tatggtgttc aagagagctt gaatttaaat aaacgtatga aatggtatac ggtaattcaa
    22141 tctataggtc ttgttcaatg gtatgaagag caaaaaagat ataaggatat gaacacttgg
    22201 cttaaattcc taaatgaagt tatgaatagt aacatgttta tttaagagga gaataaaata
    22261 tgagagttcg atacaaacca tgggctgaag attatttaaa agatcatcct gaattggttg
    22321 acatggacgg tcaacatgca gggaaaatga ctgaatggtt tgataaaacg caaccgatac
    22381 acattgaaat tggttcgggt atggggcagt ttattacaac attagctgct caaaatcctc
    22441 atattaacta tatttcaatg gaacgtgaga aaagtatcgt ttataaagta ttggataaag
    22501 ttaaagagat gggtttaaca aatttaaaga ttatttgtaa tgacgccatt gaattaaatg
    22561 aatattttaa agacggcgaa gtttcgcgta tttatttgaa cttttcagat ccatggccaa
    22621 aaaatcgtca tgcaaaacga cgtttaacgt atcatacgtt tttagcgttg tatcaacaaa
    22681 tcttaaatga tgaaggagat ttacatttta aaactgataa cagaggacta tttgcctaca
    22741 gtttagaaag tatgtctcaa tttggaatgt attttacaaa aataaatcta aatttacatc
    22801 aagaagacga tggcagtaat attttaacag aatatgaaaa gaaattttcg gataaagggt
    22861 cacgtattta tcgtatggaa gcgaaattcc attcacaaaa ataaagcact tatgagggta
    22921 tgtacacata caatcataag tgttttttcg tactataatg gttctataga taaagattct
    22981 ataataaatc ggactgatgg aaaaaagtat tttacttttc atctgtccga ttttttgatt
    23041 ttgaatataa aaaaagcgct attgcctctg taatttaaag tgaccaaacc taaactaaag
    23101 gagacaattg cgcctatgaa caatgttata ctaaatacct ttgatttgaa agaataaagc
    23161 ttgcatttta cttggaaatt ttaattatta atttaaaatt acagtccgat ggttatgatg
    23221 catttacata taatatgatt gcattaatct ttataagtag ttggaagtgt attagtgtgg
    23281 ggcgtttcgt ttttgttcgc atttatgaat agtgatatga tgtaataaac acatgctaat
    23341 tgtaataacg aatacagaaa gaataggtga tgttatgaaa atcggggata tatctattca
    23401 ttatctaaat ggcggcaata caaaaatgga tggcggtgca atgtttggtg ttgttccgaa
    23461 gccgttgtgg tcaaagcaat acaatgcaaa tgaacgaaat caaatcaatt taccgacaca
    23521 tccaattttg attcaaacgg cccaatataa tttgattata gatgcgggta ttggtaatgg
    23581 taaattatct gaaaagcaat tacgtaattt tggagtagat gaagaaagtc atataattgc
    23641 tgatttggca aattataatt taacgccaaa ggatattgat tatgtgctaa tgacacatat
    23701 gcattttgat catgcagccg gtttgactga tcaagcggga catgcaattt ttgaaaatgc
    23761 gattcatgtt gtgcaacaag atgagtggca tgagtttatt gcacctaata taagaagtaa
    23821 atcaacatac tgggataaga ataaaggcga ttatagtaac aagttgattt tattcgaaaa
    23881 acattttgaa ccggttccgg gtatcaagat gcaacatagt ggaggtcata gctttggcca
    23941 cacaatcatt acgattgaaa gtcaaggaga taaagcagtt catatgggtg atatattccc
    24001 gactactgca cataaaaatc ctctatgggt aacagcatat gatgattatc ctatgcaatc
    24061 gattcgtgaa aaggaacgta tgataccata ttttatccag caacaatatt ggttcttgtt
    24121 ttatcatgat gaaaactact ttgctgtaaa atacagcgat gatggtgaaa acttagatgc
    24181 atatatttta cgtgaaacat tagttgataa taactaaaat aaagatttat tactaaacaa
    24241 attttcaaga aaaaaattga gccacatcca atcttactaa ttagggtgtg gctcattttt
    24301 aagttttacg atccaaatca aatatggata aaattcgtat taacgctcta caatgttaat
    24361 gacttcacca gtatatgcat ctgcataaaa atcataatga atattttgac catttttaat
    24421 agttgtaatt ccaccttgat aaactaaacg gtatttatca gtttcaggat gaacgaatgg
    24481 ttcataaacg atatatgagc ctttgacatt cataaaatat gattttactt cattaagtac
    24541 tttaacggga ttatagcgtt tacgattaat aaattggatg attgaaatgg tagaaataat
    24601 tacaatggct actgcaatta ttgttggaat tatatatttc agtttagtca tcatttatgc
    24661 tcccttgatt tcaaattcat atcattagtt taccatattg aagatgatat aataacttat
    24721 aaggagtgag aacttttatg aacataaata aaaaagtaac attacaacga attcaaactt
    24781 taactgagct tcatggggca ccaggttttg aagaggaagt aaaaaattat atgactcagc
    24841 aaatggcgcc gtacgtagat gaatttattg aaaatcgtat gggtggtttt tttggtgtga
    24901 aaaaatctaa aaatccaaat gcaaaacgtg taatgattgc agcacatatg gatgaaattg
    24961 gatttatgat tacaaacatc actaaaaatg gaatgattca attcacaaat ttaggtggtg
    25021 ttgcaaatga tatttggcaa ggacaacgct tagtaattaa aaatagaaat ggcgataaaa
    25081 ttatcggtgt tgtttctaat atacctaaac attttcgtac tggtagtgaa ggtgcaccgg
    25141 aaattaaaga tttaacatta gatataggtg ctcaaaatga agatgaagtg cgtgagcgcg
    25201 gaatagatat aggagataca attgtacctc acacgccatt cacacagtta tctgaacatc
    25261 gttatagtgc taaagcatgg gataatcgtt atggttgtgt cttggcaatt gaaatactag
    25321 aattattaaa agatatagaa ttagatatag acttgtatgt tggcgcaaat gttcaagaag
    25381 aggttggatt acgaggtgcg aaagcatctg cagagatgat agacccagac gttgcatttg
    25441 tagtcgattg ttcacctgcc aatgacgtta aaggtaatca accattatcc ggtgaacttg
    25501 gtaaaggtac gttaattcgc ataaaagacg gtacaatgat tttaaagcct gcatttagag
    25561 actatttatt aaagttagta gaagcacatg acattgaaca tcaatactat atgtcaccag
    25621 gtggaacaga tggtggagaa attcataaag ctaatattgg tattccgact gcggttattg
    25681 gtgtatgtgc acgatatatt catagtacag actcagtatt tgatataaga gactattttg
    25741 cagctagatc tttactttca gaagccattt gtaatttaga taataatcaa atagaaacat
    25801 tacaatataa ataatcgggt aataacaact attatctcta aatagttata tataatcatt
    25861 aattaaggag acataaaaat gaaacaactt gaatcagaac aacaatttga atctttaaaa
    25921 caaggtgcta cagtatttga attcactgca ggctggtgtc cagattgtag agtgatagaa
    25981 ccagatttac cggaattaga agcgagatat cctatgtttg atttcgtatc agtagaccgt
    26041 gataaattta tggatatttg tattgaaaat ggtattatgg ggattccaag ttttctagta
    26101 tataaaaatg gagaactgct tggaagttat attggaaaag aacgaaaatc aattgaacag
    26161 atagatgcat ttttagctca atacgtgtaa tttagactag agaaaaacgg ggtaatactc
    26221 gtttttctct gttactatgt gttgatttat tgtaaactat tataaggtgc gaaattagga
    26281 gtgttacata tgaatacctt tcaaatgaga gataaattaa aggaacgttt aaaccattta
    26341 gacgttgatt ttaaatttaa tcgtgaagaa gaaactttgc gtatttatcg aacagataat
    26401 aacaaaggta tcacgattaa acttaacgct atagtcgcaa aatatgaaga taaaaaagaa
    26461 aaaattgtag atgaaattgt ttattacgtt gatgaagcta ttgcacaaat ggcagataaa
    26521 acccttgaga gtatatcatc tagtcaaatc atgcctgtca ttagagcgac tagctttgat
    26581 aaaaaaacta aacaaggcgt tccttttatc tatgatgagc atactgcaga aacagcagtt
    26641 tattatgcag tcgatttagg gaaatcatat cgtctaattg acgaaagcat gttggaggat
    26701 ttgaagttaa ctgaacaaca aataagagac atgtctctgt ttaatgttag aaaattgtca
    26761 aattcattta cgactgatga agtaaaaggt aatatttttt attttattaa ctcaaatgac
    26821 gggtatgatg caagtaggat actaaatact gcatttttaa atgaaattga ggcacaatgt
    26881 caaggcgaaa tgctcgtagc agtgccacac caagatgtgt taattattgc agatatacgc
    26941 aataaaacag gatatgatgt gatggcacat ttaacaatgg aatttttcac taaaggtcta
    27001 gttccaatta catcattatc ctttggatat aaacagggtc atcttgaacc gatatttatt
    27061 ttaggtaaaa ataataaaca aaaaagagat ccaaacgtga ttcagcgttt agaagcaaat
    27121 cgtcgtaaat ttaataaaga taaatagaaa taattggata aggagttttg tcataatgaa
    27181 tttattttac aatcctaaat atgtaggaga tgttgcattt ttacaaattg aaccagttga
    27241 aggtgaatta aactacaata aaaaaggtaa cgttgttgaa attactaatg aaggtaatgt
    27301 tgtaggttat aatatttttg aaatttcaaa agatataaca attgaagaaa caggtcatat
    27361 taaattaact gatgaacttg taaatgtatt ccaaaagcgt atttcagaag ctggttttga
    27421 ttataaatta aatgctgatc tatcaccgaa atttgtagtt ggctacgttg aaactaaaga
    27481 caaacatcct gatgcagata aattaagcgt actaaatgta aacgttggaa atgacacatt
    27541 acaaattgta tgtggcgcgc ctaacgttga agctggacag aaagttgttg ttgctaaagt
    27601 aggtgcagtg atgcctagcg gtatggtaat taaagatgct gaattacgtg gtgttgcctc
    27661 aagcggtatg atttgttcaa tgaaagaatt gaatttacct aatgcacctg aagaaaaagg
    27721 tattatggta ttaaatgaca gctatgaaat tggacaagca ttttttgaat aattaaggaa
    27781 ggtagtgaaa atatgagctg gtttgataaa ttattcggcg aagataatga ttcaaatgat
    27841 gacttgattc atagaaagaa aaaaagacgt caagaatcac aaaatataga taacgatcat
    27901 gactcattac tgcctcaaaa taatgatatt tatagtcgtc cgaggggaaa attccgtttt
    27961 cctatgagcg tagcttatga aaatgaaaat gttgaacaat ctgcagatac tatttcagat
    28021 gaaaaagaac aataccatcg agactatcgc aaacaaagcc acgattctcg ttcacaaaaa
    28081 cgacatcgcc gtagaagaaa tcaaacaact gaagaacaaa attatagtga acaacgtggg
    28141 aattctaaaa tatcacagca aagtataaaa tataaagatc attcacatta ccatacgaat
    28201 aagccaggta catatgtttc tgcaattaat ggtattgaga aggaaacgca caagtcaaaa
    28261 acacataata tgtattctaa taatacaaat catcgtgcta acgattcaac tccagattat
    28321 cacaaagaaa gtttcaagac ttcagaggta ccgtcagcta tttttggcac aatgaaacct
    28381 aaaaagttag aaaatggtcg tatccctgta agtaaacctt cagaaaaagt tgagtcagat
    28441 aaacaaaaat atgataaata tgtagctaag acgcaaacgt ctcaaaataa acaattagaa
    28501 caagagaaac aaaatgatag tgttgtcaaa caaggaactg catctaaatc atcagatgaa
    28561 aatgtatcat caataacaaa atcaacgcct aattattcaa aagttgataa tactatcaaa
    28621 attgaaaata tttatgcttc acaaattgtt gaagaaatta gacgtgaacg agaacgtaaa
    28681 gtgcttcaaa agcgtcgatt taaaaaagcg ttgcaacaaa agcgtgaaga acataaaaac
    28741 gaagagcaag atgcaataca acgtgcaatt gatgaaatgt atgctaaaca agcggaacgc
    28801 tatgttggtg atagttcatt aaatgatgat agtgacttaa cagataatag tacagatgct
    28861 agtcagcttc atacaaatgg catagagaat gaagctgtat caaatgatga aaataaacaa
    28921 ccgtcaatac aaaatgaaga cactgatgac actcatgtag atgaaagtcc atacaattat
    28981 gaggaagtta gtttgaatca agtatcgaca acaaaacaat tgtcagatga tgaagttacg
    29041 gtttcggatg taacgtctca acgtcaatca gcactgcagc ataacgttga agtaaataat
    29101 caagatgaac taaaaaatca atccagatta attgctgatt cagaagaaga cggagcaacg
    29161 aataaagaag aatattcagg aagtcaaatc gatgatgcag aattttatga attaaatgat
    29221 acagaagtag atgaggatac tacttcaaat agcgaagata ataccaatag agacgcgtct
    29281 gaaatgcatg tagacgctcc taaaacgcaa gagcacgcag taactgaatc tcaagttaat
    29341 aatatcgata aaacggttga taatgaaatt gaattagcgc cgcgtcataa aaaagatgac
    29401 caaacaaact taagtgtcaa ctcattgaaa acgaatgatg tgaatgatgg tcatgttgtg
    29461 gaagattcaa gcatgaatga aatagaaaag cataacgcag aaattacaga aaatgtgcaa
    29521 aacgaagcag ctgaaagtga acaaaatgtc gaaaagaaaa ctattgaaaa cgcaaatcca
    29581 aagaaacaga ctgaaaaggt ttcaacttta agtaaaagac catttaatgt tgtcatgacg
    29641 ccatctgata aaaagcgtat gatggatcgt aaaaagcatt caaaagtcaa tgtgcctgaa
    29701 ttaaagcctg tacaaagtaa acaagctgcg agtgaaagca agactgcgac tcaaaccaca
    29761 ccatcatcaa gtactgattc acaagagtca aacacaaatg catataaaac aaataatatg
    29821 acatcaaaca atgttgagaa caatcaactt attggtcatg cagaaacaga aaatgattat
    29881 caaaatgcac aacaatattc agagcagaaa ccttctgctg attcaactca aacggaaaca
    29941 tttgaagaaa gccaagatga taatcaattg gaaaatgagc aagttgatca atcaactccg
    30001 tcttcagttt cagaagtaag cgacataact gaagaaagcg aagaaacaac acatccaaac
    30061 aatactagtg aacaacaaga taatgatgat caacaaaaag atttacagcc tacattttca
    30121 aatcaaaatg aagatacagc taatgaaaat agacctcgga cgaaccaacc agatgttgca
    30181 acaaatcaag ctgtacaaac atctaagccg atgattcgta aaggcccaaa tattaaattg
    30241 ccaagtgttt cattactaga agaaccacaa gttattgagc cggacgagga ctggattaca
    30301 gataaaaaga aagaacttaa tgacgcatta ttttacttta atgtacctgc agaagttcaa
    30361 gatgtaactg aaggtccaag tgttacaaga tttgaattat cagttgaaaa aggtgttaaa
    30421 gtttcaagaa ttacggcatt acaagatgac attaaaatgg cattggcagc gaaagatatt
    30481 cgtatagaag cgccaattcc aggaactagt cgtgttggta ttgaagttcc gaaccaaaat
    30541 ccaacgacgg tcaacttacg ttctattatt gaatctccaa gttttaaaaa tgctgaatct
    30601 aaattaacag ttgcgatggg gtatagaatt aataatgaac cattacttat ggatattgct
    30661 aaaacgccac acgcactaat tgcaggtgca actggctcag ggaaatcagt ttgtatcaat
    30721 agtattttga tgtctttact atataaaaat caccctgagg aattaagatt attacttatt
    30781 gatccaaaaa tggttgaatt agctccttat aatggtttgc cacatttagt tgcaccggta
    30841 attacagatg tcaaagcagc tacacagagt ttaaaatggg ctgtagaaga aatggaaaga
    30901 cgttataagt tatttgcaca ttatcatgta cgtaatataa cagcatttaa caaaaaagca
    30961 ccatatgatg aaagaatgcc aaaaattgtc atagtaattg atgaattggc tgatttaatg
    31021 atgatggctc cgcaagaagt tgagcagtct attgctagaa ttgctcaaaa agcgagagca
    31081 tgtggtattc atatgttagt agctacgcaa agaccatctg tcaatgtaat tacaggttta
    31141 attaaagcca acataccaac gagaattgca tttatggtat catcaagtgt agattcgaga
    31201 acgatattag acagtggtgg agcagaacgc ttgttaggat atggcgatat gttatatctt
    31261 ggtagcggta tgaataaacc gattagagtt caaggtacat ttgtttctga tgacgaaatt
    31321 gatgatgttg ttgattttat caaacaacaa agagaaccgg actatctatt tgaagaaaaa
    31381 gaattgttga aaaaaacaca aacacaatca caagatgaat tatttgatga tgtttgtgca
    31441 tttatggtta atgaaggaca tatttcaaca tcattaatcc aaagacattt ccaaattggc
    31501 tataatagag cagcaagaat tatcgatcaa ttagagcaac tcggttatgt ttcgagtgct
    31561 aatggttcaa aaccaaggga tgtttatgtt acggaagcag atttaaataa agaataatta
    31621 tgagtaagga gttttatata atgacacact atcattttgt cggaattaaa ggttctggca
    31681 tgagttcatt agcacaaatc atgcatgatt taggacatga agttcaagga tcggatattg
    31741 agaactacgt atttacagaa gttgctctta gaaataaggg gataaaaata ttaccatttg
    31801 atgctaataa cataaaagaa gatatggtag ttatacaagg taatgcattc gcgagtagcc
    31861 atgaagaaat agtacgtgca catcaattga aattagatgt tgtaagttat aatgattttt
    31921 taggacagat tattgatcaa tatacttctg tagctgtaac tggtgcacat ggtaaaactt
    31981 ctacaacagg tttattatca catgttatga atggtgataa aaagacttca tttttaattg
    32041 gtgatggcac aggtatggga ttgcctgaaa gtgattattt cgcttttgag gcatgtgaat
    32101 atagacgtca ctttttaagt tataaacctg attacgcaat tatgacaaat attgatttcg
    32161 atcatcctga ttatttcaaa gatattaatg atgtttttga tgcattccaa gaaatggcac
    32221 ataatgttaa aaaaggtatt attgcttggg gtgatgatga acatctacgt aaaattgaag
    32281 cagatgttcc aatttattac tatggattta aagattcgga tgacatatat gctcaaaata
    32341 ttcaaattac ggataaaggt actgcttttg atgtgtatgt ggatggtgag ttttatgatc
    32401 acttcctgtc tccgcaatat ggtgaccata cagttttaaa tgcattagct gtaattgcga
    32461 ttagttattt agagaagcta gatgttacaa atattaaaga agcattagaa acgtttggtg
    32521 gtgttaaacg tcgtttcaat gaaactacaa ttgcaaatca agttatcgta gatgattatg
    32581 cacaccatcc aagagaaatt agtgctacaa ttgaaacagc acgaaaaaaa tatccacata
    32641 aagaagttgt tgcagtattt caaccacaca ctttctctag aacacaagca tttttaaatg
    32701 aatttgcaga aagtttaagt aaagcagatc gtgtattctt atgtgaaatt tttggatcaa
    32761 ttagagaaaa tactggcgca ttaacgatac aagatttaat tgataaaatt gaaggtgcat
    32821 cgttaattaa tgaagattct attaatgtat tagaacaatt tgataatgct gttgttttat
    32881 ttatgggtgc aggtgatatt caaaaattac aaaatgcata tttagataaa ttaggcatga
    32941 aaaatgcgtt ttaatatgtt tataatagag tagtatgggt atttattatt aatgacatta
    33001 ttacatgtta attaggaggc gtttttaatg gattggattt taccaattgc tggaattatc
    33061 gctgcgattg cattcttaat tttatgtatc ggtatcgtag ctgtattaaa ttctgttaag
    33121 aaaaacttag attatgttgc aaaaacactt gatggtgtag aaggtcaagt tcaaggtatt
    33181 actcgtgaaa caacagattt acttcataaa gtaaaccgtt taactgagga tatccaaggt
    33241 aaagtagatc gtttaaactc agttgtagat gctgttaaag gtatcggtga ctcagtacaa
    33301 acgttaaaca gctctgtaga tcgtgtaaca aattcaatta cacataatat ttctcaaaat
    33361 gaagataaaa tctcacaagt tgttcaatgg tcaaatgttg caatggaaat tgcagacaaa
    33421 tggcaaaata gacactaccg tcgtggaagt gcaaattaca aagctaataa tgtagcaact
    33481 gatgcaaatc atagctatac ttctcgagta gataaataat taataattaa acaaatgcac
    33541 ttaaatgagg ttgttactta tttaagtgca tttgttatag gaggatatac aaatgacgca
    33601 gcaacaaaat aataaaagaa cattaaaaaa taaacacact tatcaaaatg aaccactacc
    33661 gaaccgtaaa gattttgttg ttagttttat aactggcgcg cttgttggtt cagctttagg
    33721 cttgtatttt aaaaataaag tttatcaaaa agcagatgat ttaaaagtca aagaacaaga
    33781 actgtcgcaa aagtttgaag aaagaaaaac gcaacttgaa gaaacggttg cctatacaaa
    33841 agaacgtgtt gaaggatttt taaacaaatc taaaaatgag caagcggcat taaaagcaca
    33901 acaagcagcg ataaaagaag aagcaagtgc aaataattta agcgatacat cacaagaagc
    33961 acaagagatt caagaagcta aaagagaagc acaagcagaa gcggataaaa gtgtggctgt
    34021 atcaaatgaa gagtcaaaag catcggcatt gaaggcacaa caagcagcga taaaagaaga
    34081 agcaagtgca aataatttaa gtgatacatc acaagaggca caagagattc aagaagctaa
    34141 aaaagaagca caagcagaag cggataaaag tgtggctgta tcaaatgaag agtcaaaagc
    34201 atcggcattg aaggcatcga aagaagagtc acaagctgaa agattagcaa acgctgcaaa
    34261 acagaagcaa gctaaattaa caccaggttc aaaagagagt caattaactg aagcgttatt
    34321 tgcagaaaaa ccagttgcta aaaatgactt gaaagaaatt cctcaattag ttactaaaaa
    34381 gaatgatgta tcagagacag ttaatacaga taataaagac actgttaaac aaaaagaagc
    34441 taaatttgaa aagggtgtta ttacacgtaa agctgatgaa aaaacaacta ataatacagc
    34501 tgttgacaag aaatcaggta aacaatctaa aaaaacaaca ccttcaaata aacgaaatgc
    34561 atcaaaagca tctacaaata aaacttcagg tcagaaaaag caacataata agaaatcagc
    34621 acaaggtgct aagaaacaaa gtagttcaag taagtcaact caaaagaata atcaaactag
    34681 taataagaat tcaaaaacaa caaatgctaa gtcatccaat gcatcaaaaa cgtcaaatgc
    34741 taaagttgaa aaagctaaaa gtaaaataga aaaacgtaca tttaatgact aagattacta
    34801 aaatcgttta ataatcaatc atagcagtaa gctatgtatt atatttttaa aaattgaatt
    34861 tcaaaataaa aggtaggcat tcaggtgctt accttttttg atatcatcag tttattttga
    34921 aaggcaacac gatcattcca tgtatttatg ttgtttgtaa catcgttaga ttacaatagt
    34981 gatagtgcac attttaagct gaagatggaa aaatattcga taatcaaata aacaatgaat
    35041 cttagaaggt acaatgacgt tcactaattc aaatatagcc gcatatgttg ttgagtgacg
    35101 ttcactatag atttatatta atatacaaag gttgttaatt tttattaagc gttaggttgt
    35161 aagtattaga tttttagatt tataatagac atcagaaacg aaaatttttc ttaaaagcat
    35221 aaatgtctat tcaaaataag ctataatggt aacacaaatt aaatcaatca tcattgggta
    35281 tttaatatca aaatacaata aaaattttcc aacaaaagcc aaaaaaacat aaaatggtag
    35341 tctcgaatca tataattaga aaattaatta ttttctgtca atttagggtt gaactataca
    35401 tatgatattg ttagaatatt ttttaacatt atattttatt gctttaaagt ggaatatact
    35461 tgaaataatt cgtagaggtg agtaaggatg agtaataaat tagaatcata cagaagtgag
    35521 attgtctcac tgaatcatca aattttagat ttattatcta aacgtggtga actagcacaa
    35581 aaaattgggg aagaaaaatt aaaacaaggt acacgtatct atgatccaca acgcgaaaaa
    35641 gaaatgctta acgacttaat tgatagcaac aaaggaccat ttaacgataa tacaattaag
    35701 caattattta aagaaatttt taaagcctct acagatttac aaaaatctga aaatgaaaaa
    35761 cacttatacg tatctcgtaa gttgaaacct gaggatacga ttgtaacatt tgataatggg
    35821 ggtattattg gagatggcaa caaatcattt gtatttggac catgctctgt tgaatcattt
    35881 gaacaagtag aagcggtagc taaaaattta catgccaaag gtgaaaagtt tattcgtggc
    35941 ggtgctttta aaccacgtac atcgccttat gacttccaag gcctaggtgt tgaaggactt
    36001 aaaatactta aacagattaa agataaatat gatttaaatg tagttagtga aattgtaaat
    36061 cctaatgatt ttgaagtagc cgacgaatac ttagatgtat tccaaattgg tgcacgtaat
    36121 atgcaaaact ttgagttatt aaaagaagct gggcgtacga aaaagcctat tctattaaaa
    36181 cgtggtttat ctgctacaat cgaagagttt gtttatgcag ctgaatacat tgcttcacaa
    36241 ggtaatcaaa acattatttt atgtgaacgc ggaatccgaa cttatgaaaa ggcgacacgt
    36301 aacactttag atatttcagc agtaccaatt ttaaaacaag gtacacattt accagtcatg
    36361 gtagatgtta cgcatagtac aggtcgtaaa gatatcatgt taccaactgc gaaagcagca
    36421 ttagcagtag gtgctgatgg agttatggct gaggtgcatc cagatccatc tgttgcactt
    36481 agtgatgcgg gtcaacaaat ggatttagat gaattccaag cattttatga tgaattaaag
    36541 cctttagctg atttatataa cgctaaaaag ttaaaataat attccaagga aactatagac
    36601 tacttaacta atatgtcatg ttgaagtaga atattatctt tgaattgaca attttaaact
    36661 agtagccatt ctaagagtat attactttta gagtggctat tattttttgt aaaaaaataa
    36721 aggctatact acacttaacg attgttataa tatttcgaca cttgtccaat ttcacaatta
    36781 ttaaagaata tgactgatag cagtaattaa aattatgact atgaattatc tgtaaatata
    36841 atagattcac acatttgtta ctgaaatgtg aacatttttt aacaaatgta attgatattt
    36901 gaaaaggctt tctcaaaata ttac
//
LOCUS       DALMNS010000010        36265 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.010, whole genome shotgun sequence.
ACCESSION   DALMNS010000010 DALMNS010000000
VERSION     DALMNS010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 36265)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36265)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36265
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.010"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            24..593
                     /locus_tag="O6Y56_000422"
     CDS             24..593
                     /locus_tag="O6Y56_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001619687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComK"
                     /protein_id="HDB5573717.1"
                     /translation="MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFK
                     VQKIIERSCKFYGNTYLGKKAETNRITGISSKPPILLTPLFPTYFFPTHSDRQNENIW
                     LNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
                     KNPDQPIDYNKATLNVFEALTRYSLFEDK"
     gene            735..809
                     /locus_tag="O6Y56_000423"
     tRNA            735..809
                     /locus_tag="O6Y56_000423"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:767..769,aa:Asn,seq:gtt)
     gene            812..900
                     /locus_tag="O6Y56_000424"
     tRNA            812..900
                     /locus_tag="O6Y56_000424"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:847..849,aa:Ser,seq:gct)
     gene            complement(1082..2593)
                     /locus_tag="O6Y56_000425"
     CDS             complement(1082..2593)
                     /locus_tag="O6Y56_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HDB5573718.1"
                     /translation="MEKNENINVEILTTSDMHSHFLNGDYGSNIYRAGTYVNQVRAQN
                     HRVILLDSGGSLAGSLAAYYYAIVAPYKRHPMIKLMNRMHYDASGVSPSEFKFGLSFL
                     TRSIALARFPWLSANIEYNVTKEPYFSTPYCIKHFGDLKIAIVGVTADGLMENEYSEM
                     EQDVSIEKTLVASKRWIRYIHEVEEPDFLIVIYHGGLNKISNSTKNKKASSNEAEKLM
                     EELGVIDLMITAHQHQTIVGQDHETYYVQAGQDAKELVHLSINFKKRTTTYDVESIDS
                     KVIDLNEYEEDQELLDLTFYDRKAVAYWSQEIISDKGLMLSVNGLQDLVCQTHPFSQL
                     LHDAIHLAFDNDITCVHVPMNGEKGLSGQIRNEDLYHAYPYPDKPMDMTISGQNIKDI
                     LEYSYSHLDFVNEQLSLTIIDETLCTMWQGFNYEIDMNQEPGQRVMLDQIDLTKSYRV
                     TMTDYCYRNYKNYLKNAIIHESYDETMSTLIAEKLRDPNYRISCSDNFVVKNR"
     gene            complement(2732..4090)
                     /locus_tag="O6Y56_000426"
     CDS             complement(2732..4090)
                     /locus_tag="O6Y56_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HDB5573719.1"
                     /translation="MSIFSQFLKRSSPQQGIVLYYIVAIVVAFLLLNLPYVHKPGVEV
                     NPIDTLFVAVSGISVTGLSPISIVDTYSTFGQLIILVILNIGGIGVMAIGTMLWVVLG
                     KHIGIRERQLIMLDNNKNTMSGTVKLIIDIVKSIFVIELVGAMLLAFYFYRDNPDLKY
                     AIMQGVFVSISATTNGGLDITGKSLIPYAHDYFVQAIVIFLIILGSIGFPVLLEVKAY
                     IQNRVTNFRFSLFTKITTSTYLFLFIVGVLAILLFEHNHAFKGLSWHQSLFYSLFQSA
                     TTRSAGLQTIDVTTLSDPTNIIMGILMFIGSSPSSVGGGIRTTTFAILILFLINFSNN
                     ADKTSIKVYNREVHIMDIQRSFAVFTMATILTFLGMLIISATENGKLTFLQVFFEVMS
                     AFGTCGLSLGVTSDISDISKVVLMVLMFIGRVGLISFIIMIAGRREPDKFHYPKERIQ
                     IG"
     gene            complement(4107..6431)
                     /locus_tag="O6Y56_000427"
     CDS             complement(4107..6431)
                     /locus_tag="O6Y56_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HDB5573720.1"
                     /translation="MEWTLVDIGKKHVIPKSQYRRKRREFFHNEDREENLNQHQDKQN
                     IDNTTSKKADKQIHKDSIDKHERFKNSLSSHLEQRNRDLNEDKAEESKSNQDSKSAYN
                     RNHYLTDDVSKKQNSLDSVDQDTEKSKYYDQNTEATLSTKSTDKVESTDMRKLSSDKN
                     KVGHEEQHVLSKPSEHDKETRIDFESSRTDSDSSMQTEKIKKDSSDGNKSSNLKSEVL
                     SDKSNTETKLSESDDEVNNQKPLTLPEEQKLKRQQSQNEQTKTYTYGDSEQNDKSNHE
                     NDLSHHTPSISDDKDNVMREDRIVDDNPDNDINTPSLSKTDDARKLDEKIHVEDKHKQ
                     NADSSETVGYQNQSSASHRRTEKRNMAINDHDKLKNQKPNTKTSANNNQKKATSKLNK
                     GRATNNNYSDILKKFWMMYWPKLVILMGIIILIVILNAIFNNVNKNDRMNDNNDADAQ
                     KYTTTMKNANNTVKSVVTVENETSKDSSLPKDKASQDEVGSGVVYKKSGDTLYIVTNA
                     HVVGDKENQKITFSNNKSVVGKVLGKDKWSDLAVVKATSSDSSVKEIAIGDSNNLVLG
                     EPILVVGNPLGVDFKGTVTEGIISGLNRNVPIDFDKDNKYDMLMKAFQIDASVNPGNS
                     GGAVVNREGKLIGVVAAKISMPNVENMSFAIPVNEVQKIVKDLETKGKIDYPDVGVKM
                     KNIANLNSFERQAVKLPGKVKNGVVVDQVDNNGLADQSGLKKGDVITELDGKLLEDDL
                     RFRQIIFSHKDDLKSITAKIYRDGKEKEINIKLK"
     gene            complement(6647..7450)
                     /locus_tag="O6Y56_000428"
     CDS             complement(6647..7450)
                     /locus_tag="O6Y56_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDB5573721.1"
                     /translation="MLMDPSLILPYLWVLVVLVFLEGLLAADNAIVMAVMVKHLPPEQ
                     RKKALFYGLLGAFVFRFLALFLISIIANFWFIQAAGAVYLIYMSIKNLWQFFKHPEIE
                     SPEAGDDHHYDESGEEIKASNKSFWGTVLKIEFADIAFAIDSMLAALAIAVTLPKVGI
                     HFGGMDLGQFVVMFLGGMIGVILMRYAATWFVELLNKYPGLEGAAFAIVGWVGVKLVV
                     MVLAHPDIAVLPEHFPHGVLWQSIFWTVLIGLVIIGWLGSVVKNKKSHK"
     gene            complement(7752..9314)
                     /locus_tag="O6Y56_000429"
     CDS             complement(7752..9314)
                     /locus_tag="O6Y56_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HDB5573722.1"
                     /translation="MNLKQEVESRKTFAIISHPDAGKTTLTEKLLYFSGAIREAGTVK
                     GKKTGKFATSDWMKVEQERGISVTSSVMQFDYDDYKINILDTPGHEDFSEDTYRTLMA
                     VDSAVMVIDCAKGIEPQTLKLFKVCKMRGIPIFTFINKLDRVGKEPFELLDEIEETLN
                     IETYPMNWPIGMGQSFFGIIDRKSKTIEPFRDEENILHLNDDFELEEDHAITNDSAFE
                     QAIEELMLVEEAGEAFDNDALLSGDLTPVFFGSALANFGVQNFLNAYVDFAPMPNARQ
                     TKEEVEVSPFDDSFSGFIFKIQANMDPKHRDRIAFMRVVSGAFERGMDVTLQRTNKKQ
                     KITRSTSFMADDKETVNHAVAGDIIGLYDTGNYQIGDTLVGGKQTYSFQDLPQFTPEI
                     FMKVSAKNVMKQKHFHKGIEQLVQEGAIQYYKTLHTNQIILGAVGQLQFEVFEHRMKN
                     EYNVDVVMEPVGRKIARWIENEDQITDKMNTSRSILVKDRYDDLVFLFENEFATRWFE
                     EKFPEIKLYSLL"
     gene            complement(9314..9574)
                     /locus_tag="O6Y56_000430"
     CDS             complement(9314..9574)
                     /locus_tag="O6Y56_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YueH family protein"
                     /protein_id="HDB5573723.1"
                     /translation="MALLVNKRLIDEGKTIDVYLFEALNDQIIIAIPDWFWSYQMAMT
                     LDEETCFEAILMQLFVFKEEEEAESIASQLTDWIETYKKEKD"
     gene            complement(9555..11039)
                     /locus_tag="O6Y56_000431"
     CDS             complement(9555..11039)
                     /locus_tag="O6Y56_000431"
                     /EC_number="6.3.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000340119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-
                     lysine ligase"
                     /protein_id="HDB5573724.1"
                     /translation="MDASTLFKKVKVKRVLGSLEQQIDDITTDSRTAREGSIFVASVG
                     YTVDSHKFCQSVADQGCKLVVVNKEQSLPANVTQVVVPDTLRVASILAHTLFDYPSHQ
                     LVTFGVTGTNGKTSIATMIHLIQRKLQKNSAYLGTNGFQINETKTKGANTTPETVSLT
                     KKIKEAVDAGAESMTLEVSSHGLVLGRLRGVEFDVAIFSNLTQDHLDFHGTMEAYGHA
                     KSLLFSQLGEDLSKEKYVVLNNDDSFSEYLRTVTPYEVFSYGIDEEAQFMAKNIQESL
                     QGVSFDFVTPFGTYPVKSPYVGKFNISNIMAAMIAVWSKGTSLETIIKAVENLEPVEG
                     RLEVLDPSLPIDLIIDYAHTADGMNKLIDAVQPFVKQKLIFLVGMAGERDLTKTPEMG
                     RVACRADYVIFTPDNPANDDPKMLTAELAKGATHQNYIEFDDRAEGIKHAIDIAEPGD
                     TVVLASKGREPYQIMPGHIKVPHRDDLIGLEAAYKKFGGGPVGQ"
     gene            11472..12647
                     /locus_tag="O6Y56_000432"
     CDS             11472..12647
                     /locus_tag="O6Y56_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diglucosyl diacylglycerol synthase"
                     /protein_id="HDB5573725.1"
                     /translation="MVTQNKKILIITGSFGNGHMQVTQSIVNQLNDMNLDHLSVIEHD
                     LFMEAHPILTSICKKWYINSFKYFRNMYKGFYYSRPDKLDKCFYKYYGLNKLINLLIK
                     EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHKNWITPYSTRYYVATKETKQ
                     DFIDVGIDPSTVKVTGIPIDNKFETPINQKQWLIDNNLDPDKQTILMSAGAFGVSKGF
                     DTMITDILAKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWMASSQL
                     MITKPGGITITEGFARCIPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVAS
                     LTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQEIYGKVPLYARFFVK"
     gene            12625..13815
                     /locus_tag="O6Y56_000433"
     CDS             12625..13815
                     /locus_tag="O6Y56_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001154225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5573726.1"
                     /translation="MQDSSLNNYANHKNFILMLIILFLMEFARGMYILSYINFLPTVT
                     SIAVAITSLAFSIHFIADASTNFVIGFLLKKFGTKIVLTTGFILAFTSLFLVIWFPAS
                     PFVIIFSAMMLGIAVSPIWVIMLSSVEEDKRGKQMGYVYFSWLLGLLVGMVFMNLLIK
                     VHPTRFAFMMSLVVLIAWILYYFVDVKLTNYNTRPVKAQLRQIVDVTKRHLLLFPGIL
                     LQGAAIAALVPILPTYATKVINVSTIEYTVAIIIGGIGCAVSMLFLSKLIDNRSRNYM
                     YGVILSGFILYMILIFTLSMIVNIHIVWIIALAIGLMYGILLPAWNTFMARFIKSDEQ
                     EETWGVFNSIQGFGSMIGPLFGGLITQFTNNLNNTFYFSALIFLVLAVFYGSYFIANR
                     EKAK"
     gene            complement(13928..14437)
                     /locus_tag="O6Y56_000434"
     CDS             complement(13928..14437)
                     /locus_tag="O6Y56_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjcG family protein"
                     /protein_id="HDB5573727.1"
                     /translation="MILGLALIPSKSFQEAVDSYRKRYDKQYSRIKPHVTIKAPFEIE
                     DGDLDSVIEQVRARINGIPAVEVHATKASSFKPTNNVIYFKVAKTDDLEELFNRFNGE
                     DFYGEAEHVFVPHFTIAQGLSSQEFEDIFGQVALAGVDHKEIIDELTLLRFDDDEDKW
                     KVIETFKLA"
     gene            complement(15172..16023)
                     /locus_tag="O6Y56_000435"
     CDS             complement(15172..16023)
                     /locus_tag="O6Y56_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000355331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="base excision DNA repair protein"
                     /protein_id="HDB5573728.1"
                     /translation="MDISLNFNHYIDLKKSIKNLCLMKKFEPYVTNENYDFIEMPLVV
                     DGNYVLLKIYQEKDALIKLHYQEVLNSNRKSVIQESDIVRISRSILNEALDINSNIKY
                     KSDTFGLTIISDADNYTTLIRTILAQQVSIEQANKLFLLFINTYGEIFELNNKEYTFL
                     NWDKIFSRIYKEQKVLVGTTNNRKQAIITLAELHIKNGLRENVLQVISSIKGIGAWTV
                     QMFMLFQFPHVAFENIPVADIGLHRAIEKNHDLPHKSIDKSKGESYFQNMKSIDVFKY
                     WYIYMVE"
     gene            complement(16025..16750)
                     /locus_tag="O6Y56_000436"
     CDS             complement(16025..16750)
                     /locus_tag="O6Y56_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001060547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573729.1"
                     /translation="MNNKLIYTSYDGDNIPLIDSFIKLVIDFKYIPINPTKSLGYYIS
                     TSIHDNDKGECLRDCLSLEMICDELWVFIDNNKYIPEGVRLEIATWLKYKSSPVKYIS
                     IPSLLENSSINDDLFLDFDDSNILKEKEISELVPKKSELRPVNCINILPEHHKYIDWV
                     KYHLFYNKFVPLDYLSIKPYIYFDNIEHYKSELSLLNERCNNISVMPYYVSEDNFNLS
                     FSECKIPKYIKKDWAITTMENKN"
     gene            complement(16916..17674)
                     /locus_tag="O6Y56_000437"
     CDS             complement(16916..17674)
                     /locus_tag="O6Y56_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HDB5573730.1"
                     /translation="MLEFKAGKINKHVLYSDILNRDVTLSIYLPESYNQLVKYNVILC
                     FDGLDFLRFGRIQRTYESLIKEARIDDAIIVGFHYEDVDKRREEFHPQGSRSHLTIQS
                     VGKEILPFIDSTFSTLKVGNARLLVGDSLAGSIALLTALTYPTIFSRVAMLSPHSDEK
                     VLDKLNQCANKEQLTIWHVIGLDEKDFTLPTNGKRADFLTPNRELAEQIKKYNITYYY
                     DEFEGGHQWKDWKPLLSDILLYFLSNQSPDQLYE"
     gene            complement(17817..19385)
                     /locus_tag="O6Y56_000438"
     CDS             complement(17817..19385)
                     /locus_tag="O6Y56_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HDB5573731.1"
                     /translation="MIEKLVTFLNEVVWSKPLVYGLLITGVLFTLRMRFFQVRHFKEM
                     IRLMFQGEKSPNGISSFQAIAMSLAGRVGTGNIVGVSTAIFIGGPGAVFWMWITAFLG
                     ASSAFIESTLGQIFKRVENNEYRGGPAYYIEYGIGGKFGKIYGIIFAIVTIISVGLLL
                     PGVQSNAIASSMHNAIHVPQWLMGGIVVVILGLIIFGGVRSIANVATAVVPFMAIIYI
                     LMAVIIICINIQEVPALFALIFKSAFGLQSAFGGIVGAMIEIGVKRGLYSNEAGQGTG
                     PHAAAAAEVSHPSKQGLVQAFSVYIDTLFVCTATALIILISGTYNVTDGTVNANGTPH
                     LIKDGGIYVENATGKDYSGTAMYAQAGIDKAFHGSGYQFDPTFSGVGSYFIAFALFFF
                     AFTTILSYYYITETNVAYLTRNQNNQVSSVFINIARVIILFATFYGAVKTADVAWAFG
                     DLGVGLMAWLNIIAIWILHKPAVNALKDYEIQKKRLGNGYNAVYQPDPNKLPNAVFWL
                     KTYPERLKQARVKK"
     gene            19727..20812
                     /locus_tag="O6Y56_000439"
     CDS             19727..20812
                     /locus_tag="O6Y56_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDB5573732.1"
                     /translation="MLNKVWFRTGIALIMLFILIKLFMEVHEVFTPIATIIGSVFLPF
                     LISGFLFYICLPFQNLLEKVGFPRWASITTIMLALFAIIGLIVAFVAPIIISNINNLI
                     SQTPALQKEAEQIIKFALAQMDKLPEDVTSRITNMVKSMGDGVTNILSNSLQYITSLI
                     STIFLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFFVDLLTDLNFTLKSYIQGQV
                     TVSVILGIFLYIGYSIIDLPYIPLLVLFAGVANLIPFLGSWLSFAPAAILGIIDSPTT
                     FIWVCIITLIAHQLEGNIITPNVMGKSLSIHPLTIIVVILAAGDLGGFTLVLIAVPLY
                     AVLKTVVSNIFKYRQRIIDKANSNVKD"
     gene            complement(21009..21779)
                     /gene="fabI"
                     /locus_tag="O6Y56_000440"
     CDS             complement(21009..21779)
                     /gene="fabI"
                     /locus_tag="O6Y56_000440"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HDB5573733.1"
                     /translation="MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERS
                     RKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDL
                     RGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVM
                     GVAKASLEANVKYLALDLGPDNIRVNAISAGPIRSLSAKGVGGFNTILKEIEERAPLK
                     RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFHAIK"
     gene            complement(22058..23902)
                     /locus_tag="O6Y56_000441"
     CDS             complement(22058..23902)
                     /locus_tag="O6Y56_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation:proton antiporter family
                     protein"
                     /protein_id="HDB5573734.1"
                     /translation="MEFLSLVIVVLAAFLTPIIVNRLNINFLPVVVAEILMGIVIGNS
                     FLNIVERDSILNILSTLGFIFLMFLSGLEIDFKAFKKDKRARQGQNDDESSIPGHLNL
                     ALTVFTFIMIISILLAYVFKWLGLVDDVLLMVIIISTISLGVVVPTLKEMNIMRTTIG
                     QFILLVAVLADLVTMILLTVYGAINGQGGSTIWLIGILVVFTAISYILGVQFKRMSFL
                     QKLMDGTTQIGIRAVFALIILLVALAEGVGAENILGAFLAGVVVSLLNPDEEMVEKLD
                     SFGYGFFIPIFFIMVGVDLNIPSLIKEPKLLIIIPILIVAFIISKLIPVMFIRRWFDM
                     KTTIASAFLLTSTLSLVIAAAKISERLNAISAETSGILILSAVITCVFVPIIFKKLFP
                     VPDEFNRKIEVSLIGKNQLTIPIAQNLTSQLYDVTLYYRKDLSDRRQLSDDITMIEIA
                     DYEQDVLERLGLFDRDIVVCATNDDDINRKVAKLAKAHQVERVICRLESTTDDTELVD
                     SGIEIFSSYLSNKILLKGLIETPNMLNLLSNVETSLYEIQMLNYKYENIQLRNFPFGG
                     DIIFVRIIRNNESIVPHGDTQLRYGDRLIVTGAKEYVDELKQELEFYF"
     gene            complement(23912..25297)
                     /gene="mgtE"
                     /locus_tag="O6Y56_000442"
     CDS             complement(23912..25297)
                     /gene="mgtE"
                     /locus_tag="O6Y56_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HDB5573735.1"
                     /translation="MSMNTDEKERVQEELYDETLLDQYLENDDIDQFRDEFLALHTYE
                     QSEYFEDTTDENRQKIFQYLSPEEVANFFDQLDIDDDEYELLFDKMNATYASHILEEM
                     SYDNAVDILNELTKPKVASLLTLMNKDDANEIKALLHYDEDTAGGIMTTEYLSLKAHT
                     PVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDLIVAENDAYIEDIMNERVI
                     SVNVADDQEDVAQVMRDYDFMAVPVIDYQEHLLGIITIDDILDVMDEEASEDYSRLAG
                     VSDIDSTNDSIIKTALKRLPWLIILTFLGMITATILGRFEKTLENVALLAAFIPIISG
                     MSGNSGTQSLAVSVRNITTGEINEQSKFRIALREAGSGVLSGVVCSTILFTIIVAIYH
                     QPLLALIVAGSLTCAMTVGTFVGSMIPLLMNKLNIDPAVASGPFITTINDIISMLIYF
                     GLATSFMAYLI"
     gene            complement(25318..26172)
                     /locus_tag="O6Y56_000443"
     CDS             complement(25318..26172)
                     /locus_tag="O6Y56_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDB5573736.1"
                     /translation="MKFKYHISQQETVKNFLARHDFSKKTVSAIKNNGALIVNDEPVT
                     VRKQLMPNDILEIHLPQEIPSVNLIPYARKLEVLYEDAFIIIVTKPNNQNCTPSREHP
                     HESLIEQVLYHCQEHGENINPHIVTRLDRNTTGIVIFAKYGHIHHLFSKGNLKKIYTC
                     LVYGKTHTSGIIEANIRRSKDSIITREVASDGKYAKTSYEVINQNDKYSLCKVHLHTG
                     RTHQIRVHFQHIGHPIVGDSLYDGFHDKIHGQVLQCTQIYFVHPINKNNIYITIDYKQ
                     LLKLFNQL"
     gene            complement(26169..26978)
                     /locus_tag="O6Y56_000444"
     CDS             complement(26169..26978)
                     /locus_tag="O6Y56_000444"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HDB5573737.1"
                     /translation="MRYTILTKGDSKSNALKHKMMNYMKDFRMIEDSENPEIVISVGG
                     DGTLLQAFHQYSHMLSKVAFVGVHTGHLGFYADWLPHEVEKLIIEINNSEFQVIEYPL
                     LEIIMRYNDNGYETRYLALNEATMKTENGSTLVVDVNLRGKHFERFRGDGLCVSTPSG
                     STAYNKALGGALIHPSLEAMQITEIASINNRVFRTVGSPLVLPKHHTCLISPVNHDTI
                     RMTIDHVSIKHKNVNSIQYRVANEKVRFARFRPFPFWKRVHDSFISSDEER"
     gene            complement(26995..27630)
                     /locus_tag="O6Y56_000445"
     CDS             complement(26995..27630)
                     /locus_tag="O6Y56_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase family protein"
                     /protein_id="HDB5573738.1"
                     /translation="MNQWDQFLTPYKQAVDELKVKLKGMRKQYEVGEQASPIEFVTGR
                     VKPIASIIDKANKRQIPFDRLREEMYDIAGLRMMCQFVEDIDVVVNILRQRKDFKVIE
                     ERDYIRNTKESGYRSYHVIIEYPIETLQGQKFILAEIQIRTLAMNFWATIEHTLRYKY
                     DGAYPDEIQHRLERAAEAAYLLDEEMSEIKDEIQEAQKYYTQKRSKKHEND"
     gene            complement(27647..27994)
                     /locus_tag="O6Y56_000446"
     CDS             complement(27647..27994)
                     /locus_tag="O6Y56_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573739.1"
                     /translation="MRLYINEIKIKDDTLYCYTEDSIKGLSEVGQMLVDSDNYAFAYT
                     LDDGKAYAYLIFVQETWTMLHENMTKKIIINDELELTEFHQELTYILDNIKGNNNYGK
                     EFVATVEETFDIE"
     gene            28180..28773
                     /locus_tag="O6Y56_000447"
     CDS             28180..28773
                     /locus_tag="O6Y56_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HDB5573740.1"
                     /translation="MATNHEIEFKQMITASIYNKLQEKYFKDSVLFKQVNYYIDTPDF
                     KLKEHRSALRIRVKDNQYEMTLKTPAKVGLLEYNYIVDIKPEMNLIISNDNLPDDIRQ
                     IIVEQFGVKDTTLSILGALTTYRQETKYKGDLLVLDKSEYFDTTDYELEFEVKDYNQG
                     LQKFQSLLNELNLEHHQPLNKVQRFFKKKETLSNNIN"
     gene            28877..29242
                     /locus_tag="O6Y56_000448"
     CDS             28877..29242
                     /locus_tag="O6Y56_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="truncated hemoglobin"
                     /protein_id="HDB5573741.1"
                     /translation="MTTTPYDIIGKEALYDMIDYFYTLVEKDERLNHLFPGDFAETSR
                     KQKQFLTQFLGGPNIYTEEHGHPMLRKRHMAFTITEFERDAWLENMQTAINRAAFPQG
                     VGDYLFERLRLTANHMVNS"
     gene            29265..30071
                     /gene="yjbH"
                     /locus_tag="O6Y56_000449"
     CDS             29265..30071
                     /gene="yjbH"
                     /locus_tag="O6Y56_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease adaptor protein YjbH"
                     /protein_id="HDB5573742.1"
                     /translation="MAGELRIMENKSREDINLSPVSKIEIYSFFDPFSSDCFKLSAIL
                     SKLRIEYNQYIRIRHILNPSLKVLTKCQAQSTSNFDNIALAYKAAELQGRVRAERFIH
                     LMQNEIIPKRDIITESMICDCIQNAGIDLEVFKDDLQKSKLTESLKIDLHIAREMEIE
                     QAPSLVFFSEDVHEEGLKVEGLYPYHIYTYIINELMGKPIEKNLPPKLETYIQQQQLV
                     TMEELLTIYEWPEKLLNKELKKLAIQQKIEKLKYPDGDFWKSKMPKIKSK"
     gene            complement(30531..32339)
                     /gene="pepF"
                     /locus_tag="O6Y56_000450"
     CDS             complement(30531..32339)
                     /gene="pepF"
                     /locus_tag="O6Y56_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HDB5573743.1"
                     /translation="MSQQLSREEQERKYPEYTWDLTTIFKDDEAFEAAFKEVENELGK
                     EEQFKGHIGDSAETLYNALELEDTLGTKLEKVYVYAHLKQDQDTTNDKYTGMESRAHQ
                     LIIKFSSAWSFLVPEILQIDEDKIQSFVNSYDKLQKFAFDLKLINEKRPHILDAETEK
                     LLTEAQDALSTPSNVYGMFSNADLVFEDAIDKDGNAHPLTQGTFIKYLESDDRKLRES
                     AFRNVYKAYGAHNNTLGATLAGEVKKNVFNARTHNYKTAREKALSNNHIPENVYDNLV
                     KTVHKYLPLLHRYTELRKELLGLDDLKMYDLYTPLIKDIKFEMPYEEAKEWMLKALEP
                     MGEEYLNVVKEGLNNRWVDVYENKGKRSGGYSSGAHLTNPFILLNWSNTISDLYTLVH
                     EFGHSAHSYFSRKFQPSNSSDYTIFVAEVASTCNEALLSDYMDKHLDDEKRLLLLNQE
                     LERFRATLFRQTMFAEFEHKIHAIEEAGEPLTPTRMNEEYAKLNKLYFGDSVETDEDI
                     SKEWSRIPHFYMNYYVYQYATGYSAAQSLSHQILTEGKPAVDRYINEFLKKGSSNYPI
                     EILKNAGVDMTTPEPIEQACEVFEQKLNAFEKLMKA"
     gene            complement(32387..33373)
                     /locus_tag="O6Y56_000451"
     CDS             complement(32387..33373)
                     /locus_tag="O6Y56_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein CoiA"
                     /protein_id="HDB5573744.1"
                     /translation="MLVALNGEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHF
                     AHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKVEIEPFLKEIKQIPDILINNKYV
                     IELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
                     HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQY
                     IKYCRWQNSVLEPTLSAMYQLHLTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLK
                     NGKSKLESDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDRGNDVQILF"
     gene            complement(33494..34213)
                     /gene="mecA"
                     /locus_tag="O6Y56_000452"
     CDS             complement(33494..34213)
                     /gene="mecA"
                     /locus_tag="O6Y56_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adaptor protein MecA"
                     /protein_id="HDB5573745.1"
                     /translation="MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSM
                     MDEINEEEDFVVEGPLWIQVHAFEKGVEVTISKSKNEDMMNMSDDDATDQFDEQVQEL
                     LAQTLEGEDQLEELFEQRTKEKEAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHS
                     NPITTEFEDLLYMVDGTYYYAVHFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYA
                     KIIMSHNVTAQVRRYFPETTE"
     gene            complement(34584..34979)
                     /gene="spxA"
                     /locus_tag="O6Y56_000453"
     CDS             complement(34584..34979)
                     /gene="spxA"
                     /locus_tag="O6Y56_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator Spx"
                     /protein_id="HDB5573746.1"
                     /translation="MVTLFTSPSCTSCRKAKAWLQEHDIPYTERNIFSEHLTIDEIKQ
                     ILKMTEDGTDEIISTRSKTYQKLNVDIDSLPLQDLYSIIQDNPGLLRRPIILDNKRLQ
                     VGYNEDEIRRFLPRKVRTFQLQEAQRMVD"
     gene            35274..36263
                     /gene="trpS"
                     /locus_tag="O6Y56_000454"
     CDS             35274..36263
                     /gene="trpS"
                     /locus_tag="O6Y56_000454"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDB5573747.1"
                     /translation="METLFSGIQPSGIPTIGNYIGALKQFVDVQNDYDCYFCIVDQHA
                     ITMPQDRLKLRKQTRQLAAIYLASGIDPDKATLFIQSEVPAHVQAGWMLTTIASVGEL
                     ERMTQYKDKAQKAVEGIPAGLLTYPPLMAADIVLYNTNIVPVGDDQKQHIELTRNLVD
                     RFNSRYNDVLVKPEIRMPKVGGRVMSLQDPTRKMSKSDDNAKNFISLLDEPNVAAKKI
                     KSAVTDSDGIIKFDRDNKPGITNLISIYAGLTDMPIKDIETKYEGEGYGKFKGDLAEI
                     VKAFLIEFQEKYESFYNSDKLDDILDQGRDKAHKVSFKTVKKMEKAMGLGRKR"
BASE COUNT        12038 a         6472 c         5001 g        12754 t
ORIGIN      
        1 cttaataaag cgaggttttg cttatgtatt ctcaaaatat ttatgtgata cgcaaaggag
       61 acatggttat tcgaccagca tttgatgatg acgatcaaag aaatggtagc gaaataattc
      121 ggtttgacaa aacgcgtatt caaaatcctt ttaaagtcca gaaaatcatt gaacgctctt
      181 gcaaatttta tggtaatact tatcttggca agaaagcaga gacaaaccgc atcactggca
      241 tttctagtaa accacctatt ttactaacac cattatttcc aacttatttt ttcccaacac
      301 attctgacag acaaaatgaa aatatttggt taaatatgca ttatatcgaa agtattaaag
      361 aattaaaaaa tcgtaaatgt aaagtgacat ttattaataa tgaatcaatc attcttcatg
      421 tttcatacca cagtttatgg catcaatata acaattccat tttttactat tatatggtag
      481 ataaacaatc tcgcatgata tcaaaaaatc ccgaccaacc aatagattat aataaagcca
      541 cattgaatgt gtttgaagca ttgacacgct attctttatt tgaagataaa taaattgttt
      601 atttttaaaa tatgcggaat gttttataaa tatagtgtaa atgttctgca tattttttta
      661 aggtatctat tgcaaattaa cttaatcttg ttataataat atttgtgctt gatattcaaa
      721 cacatacaaa ttaatccaca gtagctcagt ggtagagcta tcggctgtta accgatcggt
      781 cgtaggttcg agtcctacct gtggagccat tggaaacgta ctcaagttgg ctgaagaggc
      841 gcccctgcta agggtgtagg tcgcgaaagc ggcgcgaggg ttcgaatccc tccgtttccg
      901 ttacttgctt aaatggtata taccatttaa gcttttttgt ttacttatat atataatgaa
      961 tgagaatttc aatgttcttt tatatcaatt ttataattct aaaaaccttt cctagttaat
     1021 cttctctaag aaaggttttt atacttgtta aacttataat taatttatta catagcaata
     1081 tttacctgtt tttaactaca aaattatcac tacatgaaat acgataattc ggatctctta
     1141 acttctctgc aattaatgta ctcatcgttt catcgtatga ttcatgtata atagcatttt
     1201 ttaaataatt cttgtagtta cgataacaat agtcagtcat tgtaactcta taactcttag
     1261 tcaaatcaat ttgatctaac attactcgtt gcccaggttc ttgattcata tcaatctcat
     1321 aattgaatcc ttgccacatt gtacataatg tttcatcaat aattgttaag cttaattgct
     1381 cgttaacaaa atctaaatgt gaataactat actccaatat atctttgata ttttgaccac
     1441 taattgtcat atccatgggc ttatctggat atgggtatgc atgatacaaa tcttcatttc
     1501 gaatctgtcc actcaacccc ttctctccgt tcataggcac gtggacacat gttatatcat
     1561 tatcaaatgc aaggtgaatt gcatcatgta ataattgcga aaaaggatgt gtttgacaga
     1621 ctaaatcttg taacccattt actgataaca tcaaaccttt atcacttatg atttcctgtg
     1681 accaataagc cactgctttt ctatcataga atgttaaatc taataattct tgatcctctt
     1741 catactcatt taagtcaatc actttagaat caatactttc aacatcataa gttgttgttc
     1801 tctttttaaa attaatcgaa agatgtacaa gctcttttgc atcttgacca gcctgaacat
     1861 aatacgtttc atgatcttga ccgacaattg tttgatgctg atgagctgta atcattaaat
     1921 ctataacacc gagttcttcc attaattttt cagcttcatt cgaacttgcc tttttatttt
     1981 tcgtgctatt actaatttta ttcaatccac catgataaat tacaatcaaa aaatctggct
     2041 cttcaacttc atggatatat ctaatccatc gttttgaggc cactaatgtc ttttcaatag
     2101 atacatcttg ctccatttca gaatactcat tttccattaa accatctgct gtaacgccta
     2161 cgatagcaat ttttaagtca ccaaaatgtt taatacaata tggagttgaa aaataaggct
     2221 ccttagtaac attgtattca atatttgctg ataaccatgg aaaacgtgcc aaagcaattg
     2281 aacgagttaa aaatgataaa ccaaacttga attcacttgg actcacaccg ctagcatcat
     2341 aatgcattct gttcatcaac tttatcattg gatgtcgttt ataaggtgca acaatagcat
     2401 aataataggc cgctaacgag ccagctaaac ttccgccact atctaataaa atgacgcgat
     2461 gattttgtgc tcttacttgg ttaacataag taccagctct ataaatattt gaaccataat
     2521 caccatttaa gaaatgacta tgcatatctg acgtagttaa aatctctaca ttaatgtttt
     2581 catttttttc catcatgtta cacctctcat tgttactagt ttaccatttt caaaaccaat
     2641 cgtcttataa aataagttaa aaatacaaac taaaaaagca atctaagttc cagttaaaat
     2701 ctacattaac taaacttaga ttgctattat attatcctat ttgaatacgt tcttttggat
     2761 aatggaattt atctggttct cgacgtcctg ctatcataat gataaatgat attaagccaa
     2821 cacgtcctat aaacatgagt accattagta cgaccttgga aatatcacta atatcacttg
     2881 tgacaccaag cgatagtcca caagttccaa atgcagacat gacttcaaaa aatacttgta
     2941 aaaatgtaag cttaccattt tcagtagctg atataattag cattcctaaa aatgttaaaa
     3001 ttgtcgccat tgtaaatact gcaaatgaac gttgaatatc cataatgtgt acttctctat
     3061 tgtatacttt tatggatgtt ttatcggcat tattactaaa gttaattaaa aacaaaatta
     3121 aaatagcgaa agttgttgta cgaataccgc caccaaccga acttggtgaa gaacctataa
     3181 acattaaaat acccatgata atattcgtag ggtcacttag tgttgtcaca tcaattgttt
     3241 gaagacccgc acttcttgta gtcgctgatt gaaacagtga atagaataac gattgatgcc
     3301 aacttaatcc tttgaacgca tggttatgtt caaataatag aatggctaat accccaacaa
     3361 taaataggaa taaatatgtt gatgtcgtaa ttttagtaaa taatgaaaat ctaaaattag
     3421 taaccctatt ttgaatataa gctttaactt ctaataatac tgggaagccg attgatccta
     3481 aaattattaa aaatataact atcgcttgta caaaataatc atgtgcataa ggaattaatg
     3541 acttacctgt aatatctagt ccaccattgg tagtggcaga aatagaaaca aaaacacctt
     3601 gcatgattgc atattttaaa tctggattat ctcgataaaa gtaaaatgct aataacatgg
     3661 ctcctacgag ttcgattaca aatattgatt ttacaatatc aataatcaat ttgacggtac
     3721 cactcattgt gtttttgtta ttatctaaca taattaactg acgttctcta attccaatat
     3781 gtttacctag taccacccat aacatcgtac caattgccat gacgccaatt ccaccaatat
     3841 ttaatatcac gaggataatt aattgtccaa atgtagaata ggtatcgaca atacttatcg
     3901 gagacaatcc agtaacacta attccggata cggcaacaaa taatgtgtca attggattta
     3961 cttctacacc tggtttatga acatacggta agtttaataa taaaaatgca acgacaattg
     4021 cgacgatata gtacaataca ataccttgtt gagggcttga tctttttaaa aactggctaa
     4081 aaattgacac gttgttcacc tcaacattat tttagtttaa tattaatttc tttctcttta
     4141 ccatctctat aaatcttcgc tgtaattgat ttcaagtcat ctttatgact aaatataatc
     4201 tgcctaaagc gtaaatcatc ttctaaaagt ttgccatcta attcagtaat tacatcacct
     4261 tttttcagac cagattgatc tgctaaacca ttgttgtcaa cttgatctac aacaacaccg
     4321 ttcttaactt ttcctggcaa tttaactgct tgtctttcaa aactatttag attggcaata
     4381 ttcttcattt taacacctac atccggatag tcaattttac cttttgtttc taaatctttt
     4441 acaatctttt gtacttcatt aacaggtatt gcaaatgaca tattttcaac atttggcata
     4501 ctaattttag ctgcaactac accaattaat tttccttctc tattgacgac agcaccaccc
     4561 gagttacctg gatttactga tgcatcaatt tggaaagctt tcatcaacat atcatattta
     4621 ttatctttat cgaaatcaat aggaacattt ctgttcagac ctgaaataat accttctgtc
     4681 acagtgcctt taaagtctac accaagtgga ttacctacga ctaatattgg ctctcctaac
     4741 actaaattat ttgaatctcc aatagctatc tctttcactg aactgtctga agaagtcgct
     4801 ttaacaacag ctaaatctga ccatttatct ttaccaagca ctttcccaac aacactttta
     4861 ttattcgaga aagttatttt ttgattttct ttatcaccga caacgtgtgc attcgtaaca
     4921 atatataacg tatctccaga ttttttatat acaacacctg atcctacttc gtcttgagat
     4981 gctttatctt taggtaatga tgaatctttt gatgtttcat tttcaactgt aacgaccgat
     5041 ttaactgtgt tattggcatt tttcatcgtt gtcgtatatt tttgagcatc tgcatcatta
     5101 ttatcattca tgcgatcatt tttattcaca ttattaaaaa tggcattcaa aataacaatt
     5161 agaataataa tacccattag aataactaat ttaggccaat acatcatcca aaactttttc
     5221 aaaatgtcac tataattatt atttgtagcg cgccctttgt tcaattttga tgtagccttt
     5281 ttttgattat tatttgccga tgtctttgta tttggttttt gattctttaa tttatcatgg
     5341 tcattaatag ccatatttct tttttcagtt ctacgatgag atgcacttga ctgattttga
     5401 tatcccaccg tttcagacga gtctgcattt tgtttatgtt tatcttcgac atgaattttt
     5461 tcatcaagtt ttcgagcgtc atctgttttt gataatgatg gcgtattgat atcattatca
     5521 ggattatcgt caacaatacg atcttctctc ataacgttat ctttatcatc acttatcgat
     5581 ggtgtatgat gacttaaatc attttcatga ttagacttgt cattttgttc gctatcacca
     5641 tatgtatagg tttttgtttg ctcattttga ctttgctgtc ttttcaattt ctgttcttcc
     5701 ggcaaagtca atggcttctg attatttact tcatcatcag attccgacaa ttttgtttct
     5761 gtatttgatt tgtctgataa tacttcagat ttcagattac tacttttatt tccatctgaa
     5821 ctgtcttttt ttattttctc tgtctgcatc gagctgtctg aatcagttct tgaagactca
     5881 aaatcaattc tagtctcttt atcatgttct gaaggtttag aaagtacatg ttgctcttca
     5941 tgaccaactt tgtttttatc tgaacttagc tttctcatgt cagttgattc tactttatcg
     6001 gttgatttag ttgataaagt cgcttcagta ttttgatcat aatattttga tttctctgta
     6061 tcttggtcca ctgaatctaa tgaattttgt tttttagata catcgtctgt taaataatga
     6121 tttctgttat atgctgattt actatcctga ttacttttac tttcttcagc tttatcctca
     6181 ttaagatcac ggtttctctg ttctaaatgc gatgataaac tatttttaaa acgttcgtgc
     6241 ttatcaattg aatctttatg tatttgctta tctgcttttt ttgatgttgt attatctata
     6301 ttttgtttat cttgatgttg atttaaattt tcttctctgt cttcgttgtg gaagaattca
     6361 cgacgcttac gtcggtactg acttttagga attacatgtt ttttaccaat atccactaat
     6421 gtccactcca ttcaataaaa tcacttttca ttatgacaca ttaacactta atttgcttta
     6481 aaatctatat aatttctatt gaaaaaatgc taaatataaa aggcacattt tcttaatact
     6541 atatcgcatc ttttgattca tattcttcaa aatccatttt cgtggttatc caccaaatga
     6601 aaaaggacaa ccttaaacta aattaagatt gtccgcttca catcaattat ttatgcgatt
     6661 ttttattttt aacaactgaa cctaaccaac cgataattac taatccaatt agtactgtcc
     6721 agaaaataga ttgccataat acgccatgtg ggaagtgctc aggcaataca gcaatgtctg
     6781 ggtgcgctaa taccatgaca actaacttaa cacctaccca accaacgatc gcgaaggctg
     6841 caccttcaag tcctggatat ttgtttaata gctctacgaa ccatgttgct gcataacgca
     6901 ttagaataac accaatcatt ccacctagga acatgactac gaactgacct aagtccatac
     6961 caccaaagtg aataccaact ttaggaagtg ttacagcaat agctaaagca gcaagcatag
     7021 aatcaatggc aaatgcgata tctgcaaatt ctattttcaa cacagttccc cagaatgatt
     7081 tgttacttgc tttaatctct tcaccagatt catcataatg atgatcatct ccagcttcag
     7141 gactttcaat ttctgggtgt ttaaagaact gccacagatt tttgattgac atataaatta
     7201 agtaaaccgc tcctgcagct tgaataaacc aaaagttcgc gataatacta atcaagaata
     7261 atgctaaaaa tctaaataca aatgcaccta acaaaccgta aaacaaagct tttttacgtt
     7321 gttcgggtgg taagtgctta accattacag ccataactat cgcgttatct gctgctaata
     7381 agccttctaa aaatactaaa acgacaagta cccataaata aggtaagatc aaacttggat
     7441 ccattaacat gtacaactcc tttaaataaa taagttaagt acaaacaaaa agacctatgc
     7501 taaataaata gcaaaggtct cactaagcaa tttaaattgc ccactttacc ggaagatatc
     7561 ttcgtaatga cgataaagtg tcgaatcatt tatacggtca tgattcttaa gttactcccc
     7621 tctgacaaaa tgccataggt tattcatttg atacatcata gtataccttt ttcttttaaa
     7681 atatacaatt tatttttctt caacgaaaca attattttta aagtaacaaa ttcgattata
     7741 ctattgagcc gttaaagtaa actatacaat ttaatttcag ggaatttctc ttcgaaccat
     7801 cttgttgcaa attcattttc aaataagaat actaaatcgt catatctatc tttcactaaa
     7861 atcgatcttg atgtgttcat cttatctgta atttggtctt cattttcaat ccaacgtgca
     7921 attttacggc ctactggctc cataacaaca tcaacattat attcgttttt cattctatgt
     7981 tcgaaaactt caaattgtaa ctgaccaaca gcacctaaaa taatttggtt tgtgtgtaat
     8041 gttttatagt attgaatcgc accttcttgt actaattgtt caataccttt atggaaatgc
     8101 ttctgtttca tgacgttttt agcagaaact ttcataaaaa tttctggcgt aaattgtggt
     8161 aaatcttgga aactgtaggt ttgttttccc ccaactaaag tatctccaat ttgataatta
     8221 ccagtatcat atagtccaat gatatcgcct gctacagcat gattcacagt ttctttatcg
     8281 tctgccataa atgacgttga acgtgtgatc ttttgctttt tattagtacg ttgcaaagta
     8341 acatccatac cacgttcaaa tgcaccacta acgacacgca taaaggcaat tctatcacgg
     8401 tgtttaggat ccatgttggc ttgaatttta aagataaatc ctgaaaatga atcatcaaac
     8461 gggcttactt caacctcttc ttttgtttgt ctcgcatttg gcattggcgc aaaatcaaca
     8521 tatgcattta agaaattttg tacaccaaag ttagctaaag ctgaaccgaa aaatacaggt
     8581 gttaagtctc cactcaacag cgcgtcatta tcaaaggctt cacccgcttc ttcaaccaac
     8641 attaattctt caatcgcttg ttcaaaagca ctatcatttg taattgcatg atcttcttcc
     8701 aactcaaaat catcattcaa atgtaatata ttttcttcat ctctaaatgg ttcaattgtt
     8761 ttagactttc tatcaatgat gccaaagaaa ctttgcccca taccaattgg ccaattcata
     8821 gggtatgttt caatatttaa tgtctcttcg atttcatcta ataattcaaa tggttcttta
     8881 cctactcggt ctaatttatt aatgaatgta aagattggaa taccacgcat tttacaaact
     8941 ttaaataact tcaaggtttg tggttcaata ccttttgcac agtctatgac catgacagca
     9001 ctgtcaactg ccattaatgt tctatacgta tcttctgaaa agtcttcatg tcctggtgta
     9061 tctaagatat tgattttata atcatcataa tcaaattgca ttactgaact tgttacagaa
     9121 ataccacgtt cttgttcaac tttcatccag tcacttgtcg caaatttacc agtcttcttc
     9181 cctttaactg tacccgcttc acgaatggca ccactaaagt acaatagttt ttcagttaac
     9241 gttgttttcc ctgcatcggg atgtgaaata atcgcaaaag tctttctaga ctcaacttct
     9301 tgctttaagt tcattagtct ttctcctttt tatatgtttc tatccaatct gttagttgtg
     9361 atgcaatcga ctctgcctct tcctcttctt taaaaacaaa caattgcatg agtattgctt
     9421 caaaacaagt ttcttcatct aatgtcattg ccatctgata tgaccaaaac caatctggta
     9481 tagcaatgat tatctggtca tttaatgctt cgaataaata aacatcaata gttttacctt
     9541 catcaataag tcttttattg accaacaggg ccaccaccga actttttgta agctgcttca
     9601 aggccaatta aatcatctcg atgtggcacc ttaatatgcc ctggcatgat ttgatatggt
     9661 tctcttcctt ttgatgctaa aacgacagta tccccaggct cagctatgtc aattgcatgt
     9721 tttatccctt ctgcacgatc atcaaattct atatagtttt gatgtgttgc acctttggct
     9781 aattctgctg ttaacatttt cgggtcatca tttgccggat tatccggtgt gaaaatgaca
     9841 taatctgcac gacaggcaac tcgtcccatt tcaggcgttt tagtcaaatc acgttcgcct
     9901 gccataccaa ctaaaaatat caacttttgc tttacaaaag gctgtactgc atcgattaat
     9961 ttgttcatac catcagctgt atgtgcataa tcgataatta aatcaatagg taacgaagga
    10021 tctaaaactt ctaatcgccc ttcaacaggt tctaaatttt caacagcttt aataatcgtt
    10081 tctaaagatg tacctttact ccacaccgca atcattgccg ccataatatt agaaatatta
    10141 aacttaccaa cataaggcga ttttactggg taagttccaa aaggcgttac aaaatcaaag
    10201 ctgacacctt gtaaagattc ttgaatattt ttagccataa attgggcttc ctcatcaatt
    10261 ccataactaa atacttcata aggcgtcact gttcttaaat actcagaaaa tgaatcgtca
    10321 ttgtttaaca cgacatactt ttctttcgac aaatcttcac ctaattgact aaacaataaa
    10381 gacttcgcgt gtccgtatgc ttccattgtg ccatgaaaat ctaaatggtc ttgtgttaaa
    10441 tttgaaaata ttgcaacgtc aaattcaacg cctcgcagtc gtcctaatac taagccatgg
    10501 cttgatactt ctaatgtcat ggattcagcg cctgcatcaa ctgcttcttt aattttctta
    10561 gttaaagaaa ctgtttctgg tgtcgtattt gcaccttttg tctttgtttc attaatttgg
    10621 aaaccgttag ttcctaaata tgcactattt ttttgtaact ttctttgaat taaatgaatc
    10681 atcgtcgcaa tagaagtttt accatttgta cctgttacac caaatgtcac taactgatga
    10741 ctcggataat caaataatgt gtgtgctaga atactagcta ctcttaatgt gtccggcaca
    10801 accacttgtg ttacgttagc tggtaatgat tgttctttat tgaccactac caacttacac
    10861 ccttgatcag ctacactttg acagaactta tgactgtcta cagtatatcc aactgaagcg
    10921 acaaaaatgc taccttctct cgctgtacgt gaatcagtag tgatatcatc tatttgttgt
    10981 tctaaagaac ccaatacacg ctttactttt actttcttaa acaacgtact tgcatccaaa
    11041 ctgaaccgct cctttttcta caatatgttt attatacacg ttttgttgat gttaataaat
    11101 ttataatttc actgttatat cctactaatc agcattttct aatttctact attaaaaata
    11161 aaacatacgg tattatgaat tagtttcaca attatggctc atcttaaatt attaaaacca
    11221 tcttgtaaca tggtataata tcataattgt ttccaaaaat atgctataat tgtatactgg
    11281 ataattttaa atatacaaat aaaacataga acaataaatt gctttataaa ataacgtttt
    11341 attttgtatc aattcatcta ttgattaaaa ttgctataaa tgtaacgact ttgcgtcttt
    11401 atttctttta taatgccgta aaataagtta cacttaaata aaattttcaa actaacggag
    11461 ggtggctatt aatggttact caaaataaaa agatattgat tattactggc tcattcggta
    11521 acggtcatat gcaagttaca cagagtatcg ttaatcaact taatgatatg aatctagacc
    11581 atttaagcgt cattgagcac gatttattta tggaagctca tccaatcttg acttctattt
    11641 gtaaaaaatg gtatatcaat agctttaaat attttagaaa tatgtacaaa gggttttatt
    11701 acagccgccc agataaacta gacaaatgtt tctacaaata ctatggactt aataaattaa
    11761 ttaatttatt gataaaagaa aagccagatt taatattatt aacatttcct acaccagtta
    11821 tgtcggtact aactgaacaa tttaacatta atattccagt tgctacagtg atgacagact
    11881 atcgcttaca taaaaactgg attacgccgt attcaacaag atattatgtg gcaacaaaag
    11941 aaacgaaaca agacttcata gacgtaggta ttgatccttc aacagttaaa gtgactggta
    12001 ttcctattga taacaaattt gaaacaccta ttaatcaaaa gcagtggtta atagacaaca
    12061 acttagatcc agataagcaa actattttaa tgtcagctgg tgcatttggt gtatctaaag
    12121 gttttgacac gatgatcact gatatattag cgaaaagtgc aaatgcacaa gtagttatga
    12181 tttgtggtaa aagcaaagag ctaaagcgtt ctttaacagc taagtttaaa tctaacgaga
    12241 atgtattgat tctaggttat accaaacaca tgaatgaatg gatggcatca agtcaactta
    12301 tgattacgaa acctggtggt atcacaataa ctgaaggttt cgcccgttgt attccaatga
    12361 ttttcctaaa tcctgcacct ggtcaagagc ttgaaaatgc cctttacttt gaagaaaaag
    12421 gttttggtaa aatcgctgat actccagaag aagcaataaa aattgtagct agtttaacga
    12481 atggtaatga gcaattaact aacatgatta gtacaatgga acaagataaa attaagtatg
    12541 ctacacagac aatatgtcga gacttacttg atttaatcgg tcattcatca caaccacaag
    12601 agatttatgg aaaggttcct ttatatgcaa gattcttcgt taaataatta cgctaatcat
    12661 aaaaatttca ttttaatgct tattatctta tttttaatgg aatttgcgag aggcatgtat
    12721 atcctaagct atattaattt cttgccaaca gttacatcca ttgctgtagc aataacgtct
    12781 ctagcatttt caatacattt tattgctgat gcatctacaa actttgttat aggcttttta
    12841 ctgaaaaaat tcggcacaaa aatcgtttta acgactggat ttattttagc atttacaagt
    12901 ttatttttag ttatttggtt tccagcatca ccttttgtaa tcatatttag tgctatgatg
    12961 ctcggtattg cagttagtcc tatttgggtc attatgttat ccagtgttga agaagataaa
    13021 cgtggcaaac aaatgggcta tgtttatttt tcatggttgt taggcctatt ggtaggtatg
    13081 gtttttatga atctacttat caaagtgcac ccaacacgct ttgccttcat gatgtcttta
    13141 gtcgttttaa ttgcatggat attatattat tttgtcgatg taaagttaac aaattataat
    13201 actcgtccag ttaaagctca attgagacaa attgttgatg tgacaaagcg ccatttattg
    13261 ttgttccctg gtattctttt acaaggtgcc gcaattgctg ccctagttcc tatattacca
    13321 acatatgcta ctaaggttat taacgtaagc acaattgaat atactgttgc aatcattatt
    13381 ggtggtatcg gctgtgcagt ttcgatgcta tttttatcga aactaataga taaccgcagc
    13441 agaaactata tgtatggtgt tattctaagc ggatttattt tatacatgat attaattttc
    13501 actctatcta tgattgttaa tattcacatc gtgtggatta tcgctttagc tatcggtcta
    13561 atgtatggca tcttattacc agcatggaat acctttatgg cacgatttat caaatcagat
    13621 gaacaagaag aaacttgggg tgtttttaat agtatccaag gattcggctc aatgatcggg
    13681 ccattatttg gcggattaat tacacaattt accaacaatt taaacaatac attttatttc
    13741 tcggcattaa tctttttagt cttagctgta ttttatggaa gctactttat agcaaataga
    13801 gaaaaagcta agtaaggtta aaacgtattt taaaataaag aaaatggtca tttttattac
    13861 attcaataaa aatgaccatt ttcttattaa ttcaaacata ctacgattaa caatactatt
    13921 atgttactta agctaattta aacgtttcaa taactttcca tttatcttcg tcatcgtcaa
    13981 aacgtaacaa agttaattca tcgataattt ctttatggtc taccccagct aatgctactt
    14041 gaccaaaaat atcttcgaat tcttggctag atagtccttg tgctattgta aagtgtggca
    14101 caaaaacatg ttcagcttct ccatagaaat cttctccatt aaagcgatta aacaattctt
    14161 ctaagtcgtc cgtcttcgca actttaaagt aaatcacatt gttcgttggt ttgaagctag
    14221 aagcttttgt agcatgaact tctactgctg gtataccatt aatacgagct ctaacctgtt
    14281 caatgacaga atctaaatca ccatcttcaa tttcaaatgg cgctttaatt gtcacatgtg
    14341 gtttaattcg tgaatactgt ttatcatatc ttttacggta agaatccacc gcttcttgaa
    14401 atgactttga tggaattaat gctaatccta aaatcatctg aattcctcct ttgtttaacc
    14461 tattgctatt atatcaaatt tctttgaaaa ccgttacatt aaaaataatt cattatacat
    14521 cttttgcaat ttcgacaaat ttaaattaaa ttaaacagta aaatctttta taaattatat
    14581 tatagaccag actatatcat cgtcaaattt atctagacag tctagttaaa cctttaaaca
    14641 attcagtgcg tttctattac aatattcatt taagcttgtt gtgataggat tctataataa
    14701 acaaaaaata ttgatttcta gtaacagtta tatattattt ttagttaaag aactccatac
    14761 cacattcgta tgtaattggt ttatagatac aaaaatgtat cgcagaaaaa atatattgag
    14821 aatcttctac atcaattacc ttaaaccttt ccggtagtaa tgtgataatc atcttaataa
    14881 ttcctttttc gaaaaaaatg atagaactgg catgataaat agccactata ctgcctattt
    14941 aagataatcc aacaattata taaataaagt agtatcttct attatttcag aaataggtct
    15001 ttaaaaagtt tatctactct tacctttcat ttaaaaagta cgtaaagtaa acatattctg
    15061 taaagtaatt tacagaatat tacatcggga gttgaataat tagaaaagag attaagcaat
    15121 ccttatattt aataagtttt atttttactg tacaacaaac tgcttaaaca tctattcaac
    15181 catgtatata taccaatatt taaacacatc tatagatttc atgttttgga agtaagattc
    15241 tcccttactt ttatcaatcg atttatgtgg aagatcatga tttttttcta tggccctgtg
    15301 caaacctatg tctgctacag gaatattttc aaaagctacg tgaggaaatt gaaatagcat
    15361 aaacatttgc actgtccaag cacctatacc ttttatactt gaaataactt gtaaaacatt
    15421 ttctcttaag ccgtttttta tatgtaattc agcaagagtt atgatagcct gctttctatt
    15481 attagtcgta cctactaaaa ccttttgttc tttatatatt cgactgaata ttttatccca
    15541 atttaaaaaa gtgtattctt tgttatttag ttcaaaaatt tcaccataag tattaataaa
    15601 taataaaaat agtttattgg cttgttctat gctcacttgc tgagcaagta tagtccgtat
    15661 taatgttgtg taattatctg catcggatat aatagttaat ccaaaagtat cagatttata
    15721 ttttatatta ctattgatat caagagcttc attaagtatg cttcgtgaaa ttctaactat
    15781 atcactttct tgtattacac tttttcgatt agagtttaat acttcctgat aatgaagttt
    15841 aattaaagcg tctttttctt gataaatttt taagagcaca taatttccat ctactaccaa
    15901 aggcatttca ataaaatcat aattttcatt ggttacatag ggctcaaact ttttcattaa
    15961 gcataaattt ttaatactct tttttaaatc aatataatga ttgaaattta atgatatatc
    16021 catgttaatt tttattctcc attgttgtta tagcccaatc tttcttaata tatttaggta
    16081 ttttacattc tgaaaaagat aaattaaaat tatcttcact cacataatat ggcataacag
    16141 aaatgttatt acatcgttca ttcaatagcg ataactcact tttataatgt tctatattat
    16201 caaaataaat atagggcttt atacttaaat aatccaaagg tacgaatttg ttgtaaaata
    16261 aatgatactt tacccagtct atatatttat ggtgttcagg aagtatatta atacaattta
    16321 caggtcttaa ttcacttttt ttcggtacta gttcggaaat ttccttttct ttaagtatat
    16381 ttgaatcatc aaagtctaaa aataaatcgt catttatact cgaattctct aataaagaag
    16441 gtatgcttat atacttaact ggagaggatt tatattttaa ccatgtggct atttctaacc
    16501 gaactccttc tggaatatat ttattattgt ctatgaatac ccaaagttca tcacaaatca
    16561 tttccaaaga caagcagtct cttaaacact cacctttgtc attgtcatga atcgatgtag
    16621 atatataata tcctaatgat ttagttggat ttattggaat atatttaaaa tcaataacaa
    16681 gtttaataaa actatctatc aatggtatgt tatcaccatc ataagaggta tatataagct
    16741 tattattcac tgtaaattcc ccccttcact attctataca tttcaccttc ttgaagctct
    16801 ttatccgttg ttattgcagg aatatgcctt tctcttaata taatacctaa gtgccctaaa
    16861 attgcccctc ttttgaagat aaaaccacta caataatcag ttatataaga acatattact
    16921 catataattg atccggtgac tgattactta aaaaatacaa taatatatct gacagcaatg
    16981 gtttccaatc tttccattgg tgaccacctt caaattcatc gtaataataa gttatattat
    17041 atttcttaat ttgttcagct aattctctat tcggtgttaa gaaatcggca cgcttaccat
    17101 ttgttggtaa agtgaaatct ttttcatcta gaccaatgac atgccaaatt gtcaattgtt
    17161 ctttattagc acattgattt agcttatcta atactttttc atctgaatgt ggacttaaca
    17221 ttgctacacg actaaagatc gttggatagg tcaacgccgt taataaggca atactacccg
    17281 ctaaactatc ccctactaat aaccttgcat tacctacttt cagtgtagaa aacgtcgagt
    17341 caataaatgg caatatttct ttaccgactg attgaatagt taaatgagaa cgacttcctt
    17401 gtggatgaaa ttcctctcta cgcttatcaa cgtcttcata atggaatccg acaataatcg
    17461 catcatcaat acgcgcttct ttgattaacg attcatatgt acgttgtatt ctcccgaaac
    17521 gtaaaaaatc taatccgtca aagcaaagaa tgacattata tttaacaagt tgattataag
    17581 attctggcaa ataaatactt agtgtgacat ctctatttaa aatatcacta tataaaacat
    17641 gtttattaat ctttccagct ttaaattcca acataaaaaa gtgcccccta gtaattgtat
    17701 tattattgta ccaagagaca ctatatttta aaattcaaat ttctgagcac ctaaaattct
    17761 caatactttt tcttttttat caaatgatca ctacatatac tataaacaaa agtagattac
    17821 tttttgacac gtgcttgttt taaacgttct ggatatgtct tcaaccaaaa gacagcatta
    17881 ggtaatttat tcggatcagg ttgataaact gcattataac cgttgcctaa acgtttcttt
    17941 tgaatttcat aatcttttaa agcatttacg gcaggcttat gtaaaatcca aatcgcaatg
    18001 atatttaacc aagccattag acctacacct aaatcaccga atgcccatgc tacatcagct
    18061 gttttaactg caccgtaaaa tgtagcgaac aaaataatca cacgtgcaat attaataaat
    18121 accgatgaaa cttgattatt ttgattacgc gttaaataag caacatttgt ttctgtaatg
    18181 tagtagtacg acaaaatagt agtaaatgca aagaagaata aagcaaatgc aataaagtac
    18241 gaacctacac cagagaaagt aggatcaaat tgataaccac tgccatggaa cgctttatca
    18301 atgccggctt gtgcatacat cgcagttcct gaataatctt tgcctgttgc attttcaaca
    18361 taaatcccac cgtctttaat taaatgcggt gtgccattcg cattaaccgt accatcagtc
    18421 acattatatg taccagaaat aagtataatc agagcagttg cagtacatac aaataatgta
    18481 tcaatataaa ctgaaaatgc ttgtactaga ccttgtttac ttggatgtga tacttctgct
    18541 gccgctgctg cgtgtggacc tgtaccttga ccagcctcat ttgagtataa tccacgttta
    18601 acaccaatct ctatcattgc gccaacgata ccaccaaaag cagattgtaa tccaaatgct
    18661 gatttgaaaa ttaatgcaaa taacgctggc acttcttgta tattgataca aatgataatg
    18721 acagccatta gtatgtaaat aattgccata aatggtacaa cggctgttgc aacattggca
    18781 atactacgta caccaccaaa aataattaat cccaaaataa ctacaacaat accacccatt
    18841 aaccattgtg gaacatgaat cgcattgtgc atagaacttg ctatagcgtt agattgcaca
    18901 ccaggaagca acagacctac tgagataatc gtaacaatag caaagataat tccgtaaatt
    18961 ttaccaaatt taccaccaat accatattca atataatacg ctggtccacc acggtattca
    19021 ttattttcaa ctctcttgaa tatttgacca agtgtagatt caataaaagc actacttgca
    19081 cctaaaaacg cagtaatcca catccaaaat actgcaccag gtcctcctat aaatattgca
    19141 gtagatacac cgacaatatt acctgtacca accctgcctg ctaaagacat ggctatcgct
    19201 tgaaaacttg aaataccatt aggagacttc tctccttgaa acattaatcg aatcatttct
    19261 ttaaaatgtc taacttgaaa aaatcgcata cgcaatgtaa atagcacacc agtaattagc
    19321 aaaccataaa ctaatggctt actccaaaca acctcattta aaaaggttac taatttttca
    19381 atcataagat tccccctatt gtttaaacat aaaaatatta tacgattaag cacgagacac
    19441 ttcaatatat ttttcagaat attcttataa ataacaatat gatcatttca ttatttaaac
    19501 acgtttaata ttaaaataag ttattcatat aaattggtac tgtttgattc atttgcagac
    19561 ttacgagtca ttgaaaagtc tcacaaacaa ttgaaagtaa atatcttaaa atagaaagtg
    19621 aatggttaat ttaagtatat ttaaaaaata ttaacctttt taagcactgc tatttaggat
    19681 atactaaata ataactaagt ttagaaaaat aggaggaaca tcgtttatgt taaacaaggt
    19741 ttggttccga actggcatcg ctctgattat gctgttcatt ctcatcaaac tatttatgga
    19801 agtgcacgaa gtatttactc caatagctac aatcatcggt tctgtatttc ttccattttt
    19861 aattagcggt tttttatttt atatctgtct accttttcaa aacttacttg aaaaagtcgg
    19921 ttttccaaga tgggctagta taacaacaat catgttagct ttgtttgcta ttatcggctt
    19981 aattgttgcg tttgttgcac caatcatcat ttcaaatatc aacaatttaa ttagtcaaac
    20041 acctgcccta caaaaagaag cagagcaaat tattaaattc gcactagctc aaatggataa
    20101 attacctgaa gatgtaacaa gtagaattac aaatatggtt aaatcaatgg gtgatggcgt
    20161 tactaatatt ttatctaatt cattacagta cattacatca ttaatttcaa ccatcttctt
    20221 attgattatg gttccattct tcttaattta tatgttaaaa gaccatgaaa aatttatccc
    20281 agctgttgct aaatttttca aaggtgaacg taaagtattt ttcgtagatt tattaactga
    20341 tttaaacttt acattaaaat cttacattca aggtcaagta actgtcagtg ttattttagg
    20401 tatattctta tatatcggtt attcaattat tgacttacca tatattcctt tattagtact
    20461 atttgctggt gtcgcaaact taattccttt cttaggttca tggttatcat ttgcacctgc
    20521 agcaatactc ggtattatag atagtcctac tacatttata tgggtttgta tcattacatt
    20581 aattgcacac caacttgaag gtaatatcat tacaccaaat gtaatgggta aatctttaag
    20641 tatccatcct ttaacaatta tcgttgttat tttagcagca ggagatttag gtggctttac
    20701 attagttctg attgcagtgc cattatatgc tgtacttaaa acggttgtta gtaatatttt
    20761 caaataccgc caacgcatta ttgataaagc aaacagtaat gttaaggact aattctgtgg
    20821 atgtctttta ataatataag atactatcgc ctcaaaagtt gaaactactg cttttgaggc
    20881 gatttttttg tgcataaaaa aatcagtcag atgaaatatc aaatgatttt ccatcagtcc
    20941 gattattata aaagcaaaaa aagctttgct cacatatata ataacgtgaa caaagctgtt
    21001 gaatgatatt atttaattgc gtggaatccg ctatctacat gaatattttc acctgtaacg
    21061 ccacttgata agtcacttaa taagtaagcc gctgttttac ctacttctac ttgatcaacg
    21121 ttacgtttta aaggtgcacg ctcttcgatt tctttaagaa ttgtattgaa accacccaca
    21181 ccttttgcac ttaatgaacg gattggacca gctgaaattg cattaacgcg aatattatct
    21241 ggacctaagt ctaatgctaa atatttaaca tttgcttcta agctcgcttt agcaacaccc
    21301 atcacattgt agttttgaac tgcgaattcg ccacctaaat atgttgttgc aacaatgcta
    21361 ccaccttctg gcattaattt tttagcttca tgagcaacga tagttagtga gtaagaacta
    21421 atgtcttgag ctaacaagaa accttcacgt gaagtttcag aaaaacgtcc gcgtaagtct
    21481 tccatattag caaatgcgat tgaatgatat acaccatcga tattgccaac atctttacca
    21541 atttgctcaa aaccattaat aacctcttca tcgctttgaa catcaatttg atataagtgc
    21601 gcttctggtt gatttaattg ttctaataat ttttcaagct ctttacggct acgttcttta
    21661 cggtaagtaa atactaattt agcacctaat tgatctaaaa ctttagcgac accaaaagca
    21721 atactacgct tattagcgat tcccatgatg acatatgttt tgttttcaag atttaacatg
    21781 taagataact ccttataata attaatttaa cggatagaat atctgatccc agttataact
    21841 aactttttat tcgtcaatac attttaacac tattatgact ttttaataaa gttatttaaa
    21901 cgtattacaa cgataaatgt ttgatttagt cctttctgta tcaaacttga ttttacgtaa
    21961 aaagcatgta tttatcaaaa tcatatacat actagcattt taaaatcatt aattttacgt
    22021 cgtactaaaa tacgtctgca ttttaatatc attattgtta aaaataaaat tctaactctt
    22081 gtttcaattc atcaacgtat tctttagcac cggtaacaat taagcgatct ccatatcgca
    22141 attgtgtatc tccatgcgga acaatcgact cattattacg gataatacgc acgaagatga
    22201 tgtctcctcc gaatgggaaa ttacgtaatt gaatattttc atatttataa tttaacattt
    22261 gaatttcata tagtgacgtt tcaacgttac ttaataaatt caacatgtta ggtgtttcaa
    22321 ttaaaccttt taataagatt ttattactta agtagctact gaaaatttca atacctgaat
    22381 caactaactc tgtatcgtcc gttgtgcttt caagtctgca aatgacacgc tcaacttgat
    22441 gtgctttagc taatttagca acttttcggt taatatcatc gtcattcgtg gcacaaacaa
    22501 ctatgtctcg gtcaaacaga cctagtcgtt ctaaaacatc ttgttcataa tcagcaattt
    22561 ctatcatagt gatatcatcc gacaattgac gacgatcact caaatctttg cgataatata
    22621 atgtcacgtc atataactga gatgttaaat tttgcgctat aggaatcgtt aattgatttt
    22681 taccaattaa actaacttca attttacggt taaactcatc tggaactgga aacagttttt
    22741 tgaaaataat cggaacgaat acacatgtaa tgactgcgct taaaattaat atacctgacg
    22801 tttcagctga aatagcattt aatctttctg aaattttggc tgcagctatc acgagcgata
    22861 atgttgatgt taataaaaat gctgatgcaa tcgttgtttt catatcaaac caacgtcgaa
    22921 taaacatgac tggaattaat tttgaaatga taaatgcaac gattaaaatc ggtatgataa
    22981 ttagtaattt cggttcttta attaatgaag gtatgtttaa atctacacca accattataa
    23041 agaaaatagg aataaagaac ccataaccaa atgagtctaa cttttcaacc atttcttcat
    23101 ctggatttaa taatgaaaca acgacacctg ctaagaatgc acctaatata ttttctgcgc
    23161 caactccctc tgctagggct actaataata ttattaatgc aaacaccgca cgaataccga
    23221 tttgcgtcgt accatccatc aatttttgta aaaatgacat tcttttaaat tgaacaccta
    23281 aaatatatga aattgctgtg aaaacaacta atatacctat taaccatatt gtactgccgc
    23341 cttgaccatt gattgcacca tagaccgtta ataaaatcat agttactaag tccgcaagta
    23401 ctgctactaa taggataaat tgacctatag ttgttctcat aatattcatt tcttttaaag
    23461 ttggaacaac tacacctaag gaaatagttg aaatgataat gaccattaat aacacatcat
    23521 ccactaatcc aagccattta aatacatacg ctaaaagaat cgaaataatc ataataaatg
    23581 taaatacagt taacgctaga ttaagatgcc ctggaattga ggattcatca tcattttgtc
    23641 cttgacgtgc gcgtttatct tttttaaaag ctttaaaatc aatttctaaa ccacttaaaa
    23701 acattaaaaa gataaagcct aacgttgata aaatatttag aattgaatcc ctttctacta
    23761 tatttagaaa tgaatttcca atcacaatcc ccatcaaaat ttctgcaaca acaactggca
    23821 agaaattaat atttaatcga ttgacaatta ttggagttaa aaacgctgct aaaacaacaa
    23881 taactaaaga taaaaactcc ataactcctc cttaaattaa gtaagccata aatgatgtag
    23941 ctaaaccaaa ataaatcaac atactaataa tatcattaat tgttgtaata aatggtccac
    24001 tagccactgc tggatcgata ttcaatttat tcatcaataa tggaatcatc gaacctacaa
    24061 acgtccccac cgtcatcgca caagttaaac ttcctgcaac gattaatgct aaaagtggct
    24121 gatgatatat tgcaacaata attgtaaata atattgttga acatacaaca cccgataata
    24181 caccacttcc cgcttctctt aatgcaattc taaatttact ttgctcatta atttcccctg
    24241 tcgtaatgtt acgaactgaa acggctaaag attgtgtacc tgaatttcct gacataccac
    24301 taataatagg aataaacgct gcgagtagcg ctacattttc taatgttttt tcgaatctcc
    24361 ctaaaattgt cgcagtaatc attcctaaaa atgttaaaat aatcaaccat ggtaaacgct
    24421 ttaatgctgt tttaatgatt gaatcattag tcgaatcgat atctgaaacc ccggctaaac
    24481 gagagtagtc ttcactagcc tcttcatcca taacgtctaa aatatcatca atcgtgatga
    24541 taccaagcaa atgttcttgg taatctataa caggtacagc catgaaatca tagtctctca
    24601 taacttgagc aacatcttct tggtcgtctg ctacattcac actaatgaca cgttcattca
    24661 taatatcttc aatataagca tcattttcag ctacaattaa atctcttagc gataaaacac
    24721 ctactaattt accatcatca tcaactacaa aaatcacata gattgtttct gcgtctggcg
    24781 cttgcgcttt gaccaataat aacgcttctt taacaggcgt atgcgcttta agtgataaat
    24841 actccgtcgt cataataccg ccggccgtat cctcatcata gtgaagtaat gctttgattt
    24901 cattcgcgtc atctttattc atcaatgtta aaagactagc aacttttggt ttagtcaact
    24961 catttaaaat atctactgca ttatcatatg acatttcttc taatatgtga ctagcgtatg
    25021 tcgcattcat cttatcaaat agcaactcat attcatcgtc atcaatatct aattgatcaa
    25081 agaaatttgc aacctcttca ggtgataaat attgaaaaat cttttgtcta ttttcatcgg
    25141 tagtatcttc aaaatactca ctttgttcat atgtgtgtaa tgctagaaat tcatctctaa
    25201 attgatcaat atcatcattt tctaagtatt gatctaataa tgtctcatca tataattcct
    25261 cttgaacacg ctctttttca tctgtgttca ttgacatact tacaccccct gtgtgaatta
    25321 gagttgattg aataatttaa gtaattgctt ataatcaatt gtaatataaa tattgttctt
    25381 attgattgga tgaacaaaat atatttgcgt acattgcagt acttgaccat gaattttatc
    25441 atgaaaacca tcatacaaag aatctcccac aattggatgc ccaatatgtt gaaaatgtac
    25501 acgaatttga tgtgtacgtc cagtatgcaa atgaactttg cataaactgt atttatcatt
    25561 ctgatttatt acttcataag atgttttagc gtatttacca tccgaggcaa cttctctagt
    25621 tataatacta tcctttgacc gtctaatatt agcttcaata ataccagatg tatgggtttt
    25681 accatataca aggcaagtat atattttttt caagtttcct ttagaaaata aatgatggat
    25741 atgtccatat ttagcgaata tcactatacc agttgtatta cgatctaaac gcgtaacaat
    25801 atgtgggtta atattttcac catgttcctg acaatgatat agtacttgtt cgattaaact
    25861 ttcatgagga tgttctctcg aaggcgtaca attttgattg tttggtttag taactatgat
    25921 gataaaagca tcttcataca atacttctag cttacgagca taaggtatta aattaacact
    25981 cggtatttct tgcggtaaat gaatttctaa tatatcattt ggcattaatt gcttacgcac
    26041 tgtgactggt tcatcattaa caattaaagc gccattattt ttaatggcgc tcactgtctt
    26101 cttagaaaaa tcatgtcgtg ctaaaaaatt tttaacagtt tcttgttgtg atatatgata
    26161 cttaaatttc atcgttcttc atcacttgat atgaaagaat cgtgtacacg tttccagaat
    26221 gggaatggtc taaaacgtgc aaacctcact ttttcatttg ctacacggta ttgtattgaa
    26281 ttaacatttt tatgtttgat actaacatga tctatcgtca ttctaatggt atcatgatta
    26341 actggtgata ttaaacatgt atgatgcttt ggtaatacaa gtggtgatcc taccgttcta
    26401 aacacacgat tatttattga ggcaatttct gtaatttgca ttgcttcaag tgaaggatgt
    26461 atcagtgcgc cacctagcgc tttgttataa gccgttgaac ccgaaggtgt tgatacacat
    26521 aatccatcgc ctctaaatcg ctcaaagtgt ttccctctta agttaacatc cacaacaagt
    26581 gttgagccat tttcagtttt catcgttgct tcatttaatg ctaaatacct tgtttcatag
    26641 ccgttgtcgt tgtatctcat aataatttca agcaatggat attcaatgac ctgaaactct
    26701 gaattattaa tttcgataat taatttttca acttcatgag gtaaccaatc cgcataaaat
    26761 cctaaatgac ctgtatgaac tccaacaaat gccacttttg ataacatgtg gctatactga
    26821 tggaatgctt gtagtaatgt accatcacca ccaactgaaa taacaatttc aggattttca
    26881 ctatcctcaa tcatgcgaaa atctttcata tagttcatca ttttatgctt taaggcatta
    26941 gacttggagt cacctttagt taaaattgta taacgcatga tttataacac ctcgttaatc
    27001 attttcatgt tttttagaac gtttttgcgt gtaatatttt tgagcttcct gaatttcatc
    27061 tttaatttca gacatctctt catcaagtaa atacgctgct tctgccgctc tttccaaacg
    27121 atgttgaatt tcatccggat aagcaccatc atatttatat cgtaaagtat gttcaatcgt
    27181 tgcccagaaa ttcattgcta atgtacgaat ctgaatctca gccaatataa atttttggcc
    27241 ttgtaatgtt tcaattggat attcaataat gacatgatac gagcggtaac cactttcttt
    27301 agtgttacga atataatctc gttcttcaat tactttaaaa tcttttcttt gtcttaaaat
    27361 attgacgaca acatcaatat cttcaacaaa ttggcacatc attcttaaac cagcgatatc
    27421 gtacatttct tctcttaacc tatcaaatgg tatttgtcgt ttgtttgcct tatctataat
    27481 actagcgatt ggtttaacac gaccagtaac aaattctatt ggcgacgctt gttcaccaac
    27541 ttcatattgt ttacgcatgc ctttaagttt cactttcaac tcatcaaccg cttgcttata
    27601 aggtgttaag aactgatccc attgattcat agtgcttcac cccgctttat tcaatgtcga
    27661 atgtttcttc aacggttgca acaaattcct taccataatt attatttcct tttatgttgt
    27721 ctaaaatata agtaagttct tggtggaatt cagtcaattc tagttcatca ttgataataa
    27781 tttttttagt catgttttca tgcaacatcg tccatgtttc ttgtacgaaa atgagataag
    27841 catacgcttt accatcatct aatgtatacg caaaggcata attatcacta tcaacgagca
    27901 tttgtcctac ttcagataat cctttaatag aatcttctgt ataacaataa agtgtgtcat
    27961 ctttaatttt aatttcatta atatataaac gcatgcttaa tcctcctctt attccataac
    28021 attttaacac aattcaataa tacaaaacac ttacgaacac tatttttaat ggtcaaatta
    28081 acattgataa tagataaagg aaattacttt taaaattcaa ctttgtcatt cataatatag
    28141 ttaagataaa ttgaatttga tacgaggtgt atacatatca tggcaacaaa tcatgaaata
    28201 gaatttaaac aaatgataac tgcatcaatc tataataaat tgcaagagaa atattttaaa
    28261 gacagtgtgc tgtttaagca agtcaattac tatattgata cacccgattt caaattaaag
    28321 gaacatcgct ctgcactacg cataagagtt aaagacaatc aatatgaaat gactttaaag
    28381 acaccagcaa aggttggcct attagaatac aactatatcg tcgacattaa accagagatg
    28441 aacttgatta tttcaaacga caatcttcca gatgacattc gtcaaattat agttgaacag
    28501 tttggtgtaa aggatacaac tttatcaata cttggcgcat taacgacata tcgccaagaa
    28561 actaaatata aaggtgattt acttgtttta gataaaagtg agtatttcga tactacggat
    28621 tatgagttag agttcgaagt taaagactat aatcaaggtt tacaaaagtt ccaatcttta
    28681 ttaaacgaac taaacctcga acatcatcaa cctttaaata aagttcaacg tttttttaag
    28741 aaaaaagaaa cactttcaaa caatataaat taaattggca aatatgcata tttctttcaa
    28801 atgtttaaaa tcatgttata ttagttatat attaacttaa gttcgtaaca gtaaattttt
    28861 gaaaatgggt gattaaatga caacaacacc atatgacatc attggtaaag aagcgttata
    28921 cgatatgatt gattattttt acacccttgt agaaaaagat gaacgactta atcacctgtt
    28981 tccaggagat tttgcagaaa caagtcgtaa acaaaagcaa tttttaacac agtttttggg
    29041 cggtccaaac atttataccg aagaacacgg acatcctatg ctaagaaaaa gacatatggc
    29101 gtttacaatc actgaatttg aaagagatgc atggttagaa aatatgcaga cagcaattaa
    29161 tcgcgctgcg tttccacaag gtgttggaga ttatttattt gagcgcttaa gattaactgc
    29221 taatcatatg gtgaattcct aaaattaatt gtaggtgaat aaacatggct ggagaattac
    29281 gaataatgga aaataagagt cgtgaagata ttaatctatc acctgtaagt aaaatcgaaa
    29341 tttattcatt tttcgatcca tttagctccg attgctttaa attatcagca atcttatcca
    29401 aattaagaat tgaatataat caatatatac gtatcagaca tatattaaat ccttcgttaa
    29461 aagtattaac gaaatgccaa gctcaaagta catccaactt tgataacatc gccctagctt
    29521 ataaagcagc tgagttacaa ggtcgtgtac gtgccgaacg atttatacat ttaatgcaaa
    29581 atgaaatcat acctaaaaga gatattatta cagaatcaat gatttgtgac tgtattcaaa
    29641 atgcaggtat tgatttagaa gtatttaaag acgacttaca aaaaagtaaa ctaaccgaaa
    29701 gcttgaaaat tgatttgcat attgcaagag aaatggaaat cgaacaagcc ccttctctcg
    29761 ttttctttag tgaagatgtt catgaagaag gtttaaaagt cgaaggatta tacccatatc
    29821 acatctatac ttatataatt aatgaattga tgggtaaacc tatcgaaaag aatcttcctc
    29881 ctaaattaga aacttatata cagcaacaac aacttgtaac gatggaagaa ttacttacta
    29941 tttatgaatg gccagaaaaa cttttaaaca aagagttaaa gaagttagcc attcaacaaa
    30001 aaattgaaaa acttaaatat ccagatggcg atttctggaa atctaaaatg cctaaaatca
    30061 aatcaaaata aataaattaa agacctcgta caccataaat gtaacgaggt ctttttactg
    30121 actcttaatt ttgcagcatt aaattattag aacgtaatgt tatacatcga tctaaatata
    30181 ttagtgatat ttttcgaatt taaccagttc gaaaattata ctaattataa acttgataca
    30241 taatagacat atatgaatcg ttaatgtata aaaagtgcat atttaataca tttttataca
    30301 acttcacttc cctcttatta aaaaagaaca taaaaaaacg tcgtgtctga atacacgacg
    30361 ctaaacaaag gggatgggag aaatttttca cttcaaacaa aggggtatgt ttgttatgtg
    30421 attaatttca tgttcataat ataacacgct atctcttcca tttcaacctt ttaatagtac
    30481 ttaatttaaa ttgtcacaat ctgttcataa tgtaagcgaa tacaatagcg ctaagctttc
    30541 attaattttt caaaagcgtt caatttttgt tcaaaaactt cacaagcttg ttcaattggt
    30601 tcaggtgttg tcatatctac accagcattt tttaatatct caattggata atttgagcta
    30661 ccttttttca agaattcatt aatatatcta tctactgctg gcttaccttc tgttaaaatt
    30721 tgatgactta agctttgagc tgcactgtaa ccagttgcgt attgatatac ataataattc
    30781 atatagaagt gtggaattcg tgaccattcc ttactaatat cttcatcagt ttctacagaa
    30841 tcaccgaagt ataatttatt taatttggca tattcttcat tcattctagt tggcgttaat
    30901 ggttcacctg cttcttcaat tgcatgaatt ttatgctcaa attctgcgaa cattgtttgt
    30961 cggaataatg tagctctgaa acgttctaat tcttggttta ataataataa gcgtttttca
    31021 tcatcaagat gtttatccat ataatcactt aaaagtgctt cgttacaagt tgatgctact
    31081 tcagcgacaa aaatagtgta atcactagaa tttgacggtt ggaattttct actgaagtaa
    31141 ctatgtgctg aatgtccaaa ttcatgaact aatgtgtata agtctgaaat agtattagac
    31201 cagttaagta gaataaatgg attagttaaa tgtgcacctg atgaatagcc acctgaacgt
    31261 ttacctttat tctcatagac atcgacccaa cgattgttta agccttcttt aactacattt
    31321 aaatattctt cacccattgg ttctaaagct tttaacatcc actctttagc ttcttcataa
    31381 ggcatttcaa acttaatatc tttaattaat ggtgtatata aatcatacat tttcaagtca
    31441 tctaaaccta gcaattcttt gcgcaattca gtatatctat gtagcaatgg taaatattta
    31501 tgtacagttt ttactagatt gtcatataca ttttctggaa tatgattatt acttaatgct
    31561 ttttctcttg cagttttgta attgtgtgta cgagcattaa atacattttt cttcacttca
    31621 cctgctagcg tagcgccaag cgtattatta tgagcaccat atgctttata tacatttcta
    31681 aaagcacttt ctcttagttt gcgatcatct gattctaaat acttaataaa tgtaccttgt
    31741 gttaacgggt gtgcatttcc atctttatca atcgcatctt caaatactaa atcagcgttg
    31801 ctaaacatac cgtatacatt tgatggtgtt gataacgcgt cctgcgcttc tgttaataac
    31861 ttttcagttt cagcatctaa aatatgagga cgtttttcat taatcaactt caaatcaaac
    31921 gcgaattttt gtaatttatc atatgaattt acaaatgatt gaattttatc ttcatcaatt
    31981 tgtaaaatct ctggcactaa gaaactccat gccgagctaa atttaataat taattgatgt
    32041 gctcttgact ccataccagt atacttgtcg ttcgttgtat cttggtcttg ttttaggtgc
    32101 gcgtatacat atactttttc taatttagta cctaatgtat cttctaattc taacgcattg
    32161 tataatgtct cagcactatc accaatgtgt cctttaaatt gttcttcttt gcctaactca
    32221 ttttcaactt ctttaaatgc agcctcaaaa gcttcatcat ctttgaaaat tgttgttaag
    32281 tcccatgtat attcaggata tttacgttcc tgttcttctc tcgataattg ttgactcata
    32341 tgtagtaaac ctcctaataa aatataattg atataatttt ctcattttag aacaaaattt
    32401 gcacgtcatt acctctatct gaactaatat ttaaataatt gttaataagt ttttctataa
    32461 ttgctgtttt actttctaga gcaacaataa actttttcag tttaaaataa ttaagattgt
    32521 cactttctaa tttgcttttt ccattcttta accataaatc aacttgtaat tgccactcaa
    32581 ttggatgatt ttcaatataa atttgctctg gaaaaatata accataattg tgcactactt
    32641 cttgatcagt taaatgcaac tgatacattg cacttaaagt gggttctaaa acagaatttt
    32701 gccagcgaca atatttgata tattgattaa ttgcgaactt tgataattta taaacagcat
    32761 gataatcaca aggcgcctca ttaaacaact cactaatttt ggcattcctt ttttcagcga
    32821 catatttgtg cccgcctata tattgtattt gttgaaacat cattatttgt tttttctcta
    32881 aattgaacgt atgaagtttt cgagtgattg gattaataaa catactttga aaatgattga
    32941 acttcacttt attatgacaa taatcaacat catttaataa ccaacttact ttatatccca
    33001 ttttctttaa accttccgtt cgttgaagaa tctgtttata aggaattggc gaatactgta
    33061 gctcaataac atatttatta ttaatcaaaa tatccggaat ttgttttatt tcttttaaaa
    33121 atggctctat ctctacttta catccttgtt gctgtatcat ctgtgctaaa atcaatttac
    33181 ttttataatg tttaatcgat tcattattaa aacatttttg ttccgctaaa tgtttatgtg
    33241 caaaatgact aattactttg agcccacgct ttaaaataac ttgcttgcca cacaccggac
    33301 aaaaatattg tgtctttctc aatgcagtag ttgctaacac gcgttccttt tctccattta
    33361 aagctactaa catatcttca cctcaaaata ttacacgtaa gtttaactac tattactttt
    33421 tcagcttttg aaatcaataa aaaaagagac tccaaagagt ctcctttcat agtgcgttgc
    33481 ttaattaata tcgttattca gttgtctctg gaaaataacg tcgaacttga gctgttacgt
    33541 tatgactcat aattatttta gcatagtcat ttaaataaac ttctgttctg tctgttggat
    33601 aagcaaattc aagcaattga ctgtaactat cattaatgac ctcttgatca acatgactat
    33661 caaaatgtac agcataataa taagtaccat caaccatata taacaaatct tcaaactctg
    33721 tagttattgg attgctatga tatgcataat taataacatc ttctaaatcg ttaaatttca
    33781 caatgattgt tcttgtattt ttacgtgctg aagacttttg acgtttagaa ccttgagcct
    33841 ctttttcttt tgttcgttgc tcgaataatt cttctaattg atcttcacct tctaatgttt
    33901 gagctaacaa ttcttgaact tgttcatcaa attgatcagt tgcatcatca tcagacatat
    33961 tcatcatatc ttcattttta gatttagaaa ttgtgacttc gacacctttt tcaaaggcat
    34021 gtacttgaat ccataatgga ccttctacaa caaaatcttc ttcttcgtta atttcatcca
    34081 tcattgacca aaagaattct tcgccacgtt tgcgatttgt ccataaatct tcacgactaa
    34141 atccacgggc ctcgatatcg ctatatgtta taaacaattt tacagttgta tcatctactc
    34201 gttctattct catatcatct cactccttac agtcgatgaa tagtatccac attgtattaa
    34261 agcatcaaac aaaatacaat atatttgttt gatttctttc tctaaaatat tttggtaact
    34321 tataataaca tattcgttgt agcaaaacta tttaaatgat ttatacagtt aaagcattaa
    34381 agcactttct taatttaatt ttaccttatc atagcaaatg tttcatccaa aacactctaa
    34441 tatagagcta tattaacaat tgcacatttg atttagaaga tactaagcaa ttattgtaaa
    34501 attaaagcca aaaaagcaac actatagaaa tagcgttgct tgacatatct tttagtaaag
    34561 tatgacacat agttaaatgg ttattagtca accatacgtt gtgcttcttg taattggaac
    34621 gtacgaactt ttctaggtaa gaaacgtcga atctcgtcct cattataacc aacttgtagt
    34681 cgtttattat ctaaaataat tggacgacgt aataagccag gattatcttg aatgattgaa
    34741 tataagtctt gtaatggtag tgaatcaata tcaacattta atttttggta tgttttagaa
    34801 cgtgtagaaa tgatttcatc agtaccgtct tcagtcattt ttaatatttg cttaatttca
    34861 tcaattgtta aatgttcaga aaaaatatta cgctccgtat acggaatgtc atgttcttgt
    34921 aaccatgctt tcgctttacg gcaagatgtg caacttggtg aagtaaataa tgttaccata
    34981 catctcactc tcctatttga atgaataaaa ttcattgctt aaaatttagt tatagatcaa
    35041 gaaaaaacat ttttttctaa aattcttaat cgttactatt tattataact atctaacatt
    35101 aaaattaaat gagaaaaacc taatttttca gataagtttc tacacttata aaaaagatta
    35161 ttaatccctt tgttagtagc aagttatacg tatattctaa cacatcttac atttttaaga
    35221 aatactgtta taatgataat tattaaaata ttactaagaa agtaggcatt taaatggaga
    35281 cattattttc aggcatccaa cctagtggaa ttcctactat tggaaattat attggcgcac
    35341 taaaacaatt tgttgatgtg caaaatgact acgattgtta tttctgtatc gtagatcaac
    35401 atgcaattac aatgccacaa gatcgcttaa aattacgtaa acaaactaga caattagcag
    35461 cgatttattt agcttctggt atagatccag acaaagcaac attgttcata caatctgaag
    35521 tccctgcaca cgtacaagca ggatggatgt taactacgat tgcttctgtt ggagaattag
    35581 agcgtatgac gcaatacaaa gataaagctc agaaagcagt tgaaggtata ccagctggtc
    35641 tattaacata tccaccttta atggcagctg atattgttct ttacaatact aatatcgttc
    35701 cagttggcga tgaccaaaag cagcatatcg aattgactcg taaccttgta gatagattta
    35761 atagccgcta taatgatgtg cttgtgaaac ctgaaattcg tatgcctaaa gttggtggac
    35821 gtgtcatgag tttacaagac ccaacaagaa aaatgagtaa gagtgatgat aatgctaaaa
    35881 acttcatttc attattagac gagccgaatg ttgcagctaa aaaaattaaa agcgcagtaa
    35941 ctgattcaga tggtattatt aaatttgatc gtgacaacaa gccaggtata acaaatttaa
    36001 tttcaatata cgctggatta acagacatgc caattaaaga tattgagaca aaatatgaag
    36061 gtgaaggtta tggtaaattt aaaggtgacc ttgctgaaat agttaaagca tttttaatag
    36121 aattccaaga aaaatacgaa agtttctata actcagataa acttgatgat attttagatc
    36181 aaggtagaga taaagcacac aaagtttcat ttaaaactgt caagaaaatg gaaaaagcga
    36241 tgggtttagg acgtaagaga taaaa
//
LOCUS       DALMNS010000011        35757 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.011, whole genome shotgun sequence.
ACCESSION   DALMNS010000011 DALMNS010000000
VERSION     DALMNS010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 35757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35757
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.011"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            81..476
                     /locus_tag="O6Y56_000455"
     CDS             81..476
                     /locus_tag="O6Y56_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDB5573748.1"
                     /translation="MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIV
                     CDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRKYDKDGQTHFVTELYVETIKFMS
                     PKSQNNEILSDSILDIDSQNIDNHDLLEI"
     gene            865..1560
                     /gene="sceD"
                     /locus_tag="O6Y56_000456"
     CDS             865..1560
                     /gene="sceD"
                     /locus_tag="O6Y56_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase SceD"
                     /protein_id="HDB5573749.1"
                     /translation="MKKTLLASSLAVGLGIVAGNAGHEAHASEADLNKASLAQMAQSN
                     DQTLNQKPIEAGAYNYTFDYEGFTYHFESDGTHFAWNYHATGANGADMSAQAPATNNV
                     APSAGQANQVQSQEVEAPQNAQTQQPQASTSNNSQVTATPTESKASEGSSVIVNDHLK
                     QIAQRESGGNIHAVNPTSGAAGKYQFLQSTWDSVAPAKYKGVSPANAPESVQDAAAVK
                     LYNTGGAGHWVTA"
     regulatory      1767..1869
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            1948..2637
                     /gene="tenA"
                     /locus_tag="O6Y56_000457"
     CDS             1948..2637
                     /gene="tenA"
                     /locus_tag="O6Y56_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HDB5573750.1"
                     /translation="MEFSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQAD
                     AAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEVLAHDILAQIVGESYEEIIK
                     TKVWPPSGDHYIKHMYFQAHSRENAIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT
                     AKWFDFYSTEMDDIINVFEALMNKLAESMSDKELEQVKQVFLESCIHERRFFNMAMTL
                     EQWEFGGKVND"
     gene            2630..3460
                     /gene="thiD"
                     /locus_tag="O6Y56_000458"
     CDS             2630..3460
                     /gene="thiD"
                     /locus_tag="O6Y56_000458"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HDB5573751.1"
                     /translation="MIKPKIALTIAGTDPTGGAGVMADLKSFHSCGVYGMGVVTSIVA
                     QNTLGVQHIHNLNHQWVDEQLDSIFNDTLPHAIKTGMIATADIMETIRHYLMQHESIP
                     YVIDPVMLAKSGDSLMDNDTKQNLQHTLLPLADVVTPNLPEAEEITGLTIDSEEKIMQ
                     AGRIFINEIGSKGVIIKGGHSNDTDIAKDYLFTKEDVQTFENERFKTKHTHGTGCTFS
                     AVITAELAKGRPLFEAVYKAKKFISMSIQYTPEIGRGRGPVNHFAYLKKEGLDDELSK
                     "
     gene            3444..4235
                     /gene="thiM"
                     /locus_tag="O6Y56_000459"
     CDS             3444..4235
                     /gene="thiM"
                     /locus_tag="O6Y56_000459"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HDB5573752.1"
                     /translation="MNYLNKIRIENPLTICYTNDVVKNFTANGLLSIGASPAMSEAPE
                     EAEEFYKVAQALLINIGTLTAQNEQDIIAIAQTANEAGLPIVFDPVAVGASTYRKQFC
                     KLLLKSAKVSVIKGNASEILALIDDTATMKGTDSDANLDAVAIAKKAYAIYKTAIVIT
                     GKEDVIVQGDKAIVLANGSPLLARVTGAGCLLGGVIAGFLFRETEPDIEALIEAVSVF
                     NIAAEVAAENENCGGPGTFSPLLLDTLYHLNETTYQQRIRIQEVE"
     gene            4237..4878
                     /locus_tag="O6Y56_000460"
     CDS             4237..4878
                     /locus_tag="O6Y56_000460"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDB5573753.1"
                     /translation="MFNQSYLNVYFICGTSDVPSHRTIHEVLEAALKAGITLFQFREK
                     GESALKGKDKLVLAKELQHLCHQYDVPFIVNDDVSLAKEINADGIHVGQDDAKVKEIA
                     QYFTDKIIGLSISDLDEYAKSDLTHVDYIGVGPIYPTPSKHDAHTPVGPEMIATFKEM
                     NPQLPIVAIGGINTSNVAPIVEAGANGISVISAISKSENIEKTVNRFKDFFNN"
     gene            4964..5836
                     /gene="yidC"
                     /locus_tag="O6Y56_000461"
     CDS             4964..5836
                     /gene="yidC"
                     /locus_tag="O6Y56_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDB5573754.1"
                     /translation="MKKKALLPLFLGIMVFLAGCDYSKPEKRSGFFYNTFVDPMKNVL
                     DWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKVAKPEVEKIQEK
                     VKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVLKDQLVD
                     GLFKYPHFLWFDLGRPDIWITIIAGVLYFIQAYVSSKTMPDEQRQMGYMMMVISPIMI
                     IWISLSSASALGLYWSVSAAFLVVQTHFANIYYEKVAKKEVQPFIEAYEREHNGGSNK
                     KGKNTQVVSKKKKK"
     gene            complement(6551..7198)
                     /locus_tag="O6Y56_000462"
     CDS             complement(6551..7198)
                     /locus_tag="O6Y56_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDB5573755.1"
                     /translation="MQQSDIISAAKKYMESIHHNDYTGHDIAHVYRVTALAKSIAENE
                     GVNDTLVIELACLLHDTVDEKVVDANKQYVELKSFLSSLSLSTEDQEHILFIINNMSY
                     RNGKNDHVTLSLEGQIVRDADRLDAIGAIGVARTFQFAGHFGEPMWTEHMSLDKINDD
                     LVEQLPPSAIKHFFEKLLKLESLMHTDTAKMIAKERHDFMMMYLKQFFTEWNYHN"
     gene            complement(7226..8710)
                     /gene="cls"
                     /locus_tag="O6Y56_000463"
     CDS             complement(7226..8710)
                     /gene="cls"
                     /locus_tag="O6Y56_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HDB5573756.1"
                     /translation="MIELLSIALKHSNIILNSIFIGAFILNLLFAFTIIFMERRSANS
                     IWAWLLVLVFLPLFGFILYLLLGRQIQRDQIFKIDKEDKKGLELIVDEQLAALKNENF
                     SNSNYQIVKFKEMIQMLLYNNAAFLTTDNDLKIYTDGQEKFDDLIQDIRNATDYIHFQ
                     YYIIQNDELGRTILNELGKKAEQGVEVKILYDDMGSRGLRKKGLRPFRNKGGHAEAFF
                     PSKLPLINLRMNNRNHRKIVVIDGQIGYVGGFNVGDEYLGKSKKFGYWRDTHLRIVGD
                     AVNALQLRFILDWNSQATRDHISYDDRYFPDVNSGGTIGVQIASSGPDEEWEQIKYGY
                     LKMISSAKKSIYIQSPYFIPDQAFLDSIKIAALGGVDVNIMIPNKPDHPFVFWATLKN
                     AASLLDAGVKVFHYDNGFLHSKTLVIDDEIASVGTANMDHRSFTLNFEVNAFIYDQQI
                     AKKLKQAFIDDLAVSSELTKARYAKRSLWIKFKEGISQLLSPIL"
     gene            8876..9169
                     /gene="csoR"
                     /locus_tag="O6Y56_000464"
     CDS             8876..9169
                     /gene="csoR"
                     /locus_tag="O6Y56_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-sensing transcriptional repressor CsoR"
                     /protein_id="HDB5573757.1"
                     /translation="MTEQDNAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDV
                     LTQIRATRSALNSVATKLLEQHMKSCIMNKVNQGAQEEAMEELLVTFQKLIKD"
     gene            9181..9390
                     /locus_tag="O6Y56_000465"
     CDS             9181..9390
                     /locus_tag="O6Y56_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDB5573758.1"
                     /translation="MIHQNTIYTAGIETEEQVSQLTERISNMIGVHQVNINIIDGQVT
                     VSYETPANLNSIEKEIYDEGYKIVF"
     gene            9518..9655
                     /locus_tag="O6Y56_000466"
     CDS             9518..9655
                     /locus_tag="O6Y56_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573759.1"
                     /translation="MKRPEKIQNVVKLLSSLGVNIKKTKSRLDIINTLPASNKVSHEL
                     K"
     gene            complement(9919..11121)
                     /locus_tag="O6Y56_000467"
     CDS             complement(9919..11121)
                     /locus_tag="O6Y56_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDB5573760.1"
                     /translation="MNYSSRQQPDKHWLRKVDWVLVATIAVLAIFSVLLINSAMGGGQ
                     YSANFGIRQIFYYILGAIFAGIIMFISPKKIKHYTYLLYFLICLLLIGLLVIPESPIT
                     PIINGAKSWYTFGPISIQPSEFMKIILILALARVVSRHNQFTFNKSFQSDLLLFFKII
                     GVSLVPSILILLQNDLGTTLVLAAIIAGVMLVSGITWRILAPIFITGIVGAMTVILGI
                     LYAPALIENLLGVQLYQMGRINSWLDPYTYSSGDGYHLTESLKAIGSGQLLGKGYNHG
                     EVYIPENHTDFIFSVIGEELGFIGSVILILIFLFLIFHLIRLAAKIEDQFNKIFIVGF
                     VTLLVFHILQNIGMTIQLLPITGIPLPFISYGGSALWSMMTGIGIVLSIYYHEPKRYV
                     DLYHPKSN"
     gene            11439..12509
                     /locus_tag="O6Y56_000468"
     CDS             11439..12509
                     /locus_tag="O6Y56_000468"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDB5573761.1"
                     /translation="MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT
                     NDGDWRKQNNITTEIKSTDELHLENGEALEISQLLKESSSGQPYDAVFPLLHGPNGED
                     GTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEH
                     NILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNA
                     REIEVAVLGNDYPEATWPGEVVKDVAFYDYKSKYKDGKVQLQIPADLDEDVQLTLRNM
                     ALEAFKATDCSGLVRADFFVTEDNQIYINETNAMPGFTAFSMYPKLWENMGLSYPELI
                     TKLIELAKERHQDKQKNKYKID"
     gene            12524..13882
                     /locus_tag="O6Y56_000469"
     CDS             12524..13882
                     /locus_tag="O6Y56_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDB5573762.1"
                     /translation="MINVTLKQIQSWIPCEIEDQFLNQEINGVTIDSRAISKNMLFIP
                     FKGENVDGHRFVSKALQDGAGAAFYQRGTPIDENVSGPIIWVEDTLTALQQLAQAYLR
                     HVNPKVIAVTGSNGKTTTKDMIESVLHTEFKVKKTQGNYNNEIGLPLTILELDNDTEI
                     SILEMGMSGFHEIEFLSNLAQPDIAVITNIGESHMQDLGSREGIAKAKSEITIGLKDN
                     GTFIYDGDEPLLKPHVKEVENAKCISIGVATDNELVCSVDDRDTTGISFTINNKEHYD
                     LPILGKHNMKNATIAIAVGHELGLTYNTIYQNLKNVSLTGMRMEQHTLENDITVINDA
                     YNASPTSMRAAIDTLSTLTGRRILILGDVLELGENSKEMHIGVGNYLEEKHIDVLYTF
                     GNEAKYIYDSGQQHVEKAQHFNSKDDMIEVLTSDLKAHDRVLVKGSRGMKLEEVVNAL
                     IS"
     gene            14399..15919
                     /locus_tag="O6Y56_000470"
     CDS             14399..15919
                     /locus_tag="O6Y56_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDB5573763.1"
                     /translation="MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILG
                     QAQTGTGKTGAFGIPLIEKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVT
                     VFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGF
                     IDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEF
                     YTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQ
                     AKRLEVLKKFKNDQINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRA
                     GKEGIAVTFVNPIEMDYIRQIEDANGRKMSALRPPHRKEVLQAREDDIKEKVENWMSK
                     ESESRLKRISTELLNEYNDVDLVAALLQELVEANDEVEVQLTFEKPLSRKGRNGKPSG
                     SRNRNSKRGNPKFDSKSKRSKGYSSKKKSTKKFDRKEKSSGGSRPMKGRTFADHQK"
     gene            complement(16272..16967)
                     /locus_tag="O6Y56_000471"
     CDS             complement(16272..16967)
                     /locus_tag="O6Y56_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDB5573764.1"
                     /translation="MQSKILIIEDDHAITHLIDVALTLDYYNVTTAENATQAHFKIQI
                     DKPDVILLDLGLPDKDGLCLISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTK
                     PFNVDELRARIRVIERIAKSHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSL
                     LELLSNHKGKVLTYEMILKRIYGYVNKTEMPSLRVHMTSLRQKLSQCHDDAKDIIKTH
                     PRIGYQMLQWKEK"
     gene            complement(16967..19624)
                     /locus_tag="O6Y56_000472"
     CDS             complement(16967..19624)
                     /locus_tag="O6Y56_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HDB5573765.1"
                     /translation="MSNTESLNIGKKRGSLTIYIGYSPGVGKTFEMLSNAIELFQSNV
                     DIKIGYIEPHQRDETNALAEQLPKIATNFTKHGSHHFQYLDVDRIIEESPTIVLIDEL
                     AHTNISRDRHEKRYMDIEEILNHGIDVHTTLNIQHIESLSSQIELMTGVHVKERVPDY
                     FIMSADVLEVVDISPEQLIKRLKAGKVYKKDRLDVAFCNFFTYAHLSELRTLTLRTVA
                     DLMSDKEKVRHNHKTSLKPHIAVAISGSIYNEAVIKEAFHIAQKEHAKFTAIYIDVFE
                     KNRQYKDSQKQVHQHLMLAKSLGAKVKVVYSQTVALGLDEWCKNQDVTKLIIGQHIRN
                     KWRDFFNKPLIDHLMSFEHSYKIEIVPIKQIPVELKMNKSPYRPKGKRFAIDMLKMIL
                     IQIICVMMGLWIYQLDKHESSTIILMIFLIGIILLSIWTRSYIIGFLAAIINVFVFNY
                     FFTEPRYTFEVYRFDYPITFIVSILTSILTSALLKQIKFQYSITKKQLYRTDLLFQFN
                     DSIKQTYTVENLLINAGYQINQLLQQSITIYVINQSKVIKTIPLQNHIDNTTQQHEQA
                     LSWVIKNERQAGATTDTFPGINKWLIPIGTSPIKGILAIDYQSSQVINPYDASILESM
                     LNELSLAVENVTLLKQTRESMLQAERQLTHSNFLRSISHDIRTPLTTIMGNLDILVSH
                     SKDMSIIEKEQLLVHSFQESQYLYLLVTNILSLTKLQSSNVQIKLQPYLVSELVEEID
                     MILERRHLKKRITVSSSVDLQFIHIDSKLILQALFNLIENAVKHTSTDTKINLSIRYA
                     SDEQIEFAVIDEGPGISLEEQQKIFEPFYTGSNKYFKDNQKESMGLGLYLVQTILHKH
                     QSNLQYNPNQPHGSIFYFNIDTDFNEGDI"
     gene            19762..19872
                     /gene="kdpF"
                     /locus_tag="O6Y56_000473"
     CDS             19762..19872
                     /gene="kdpF"
                     /locus_tag="O6Y56_000473"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HDB5573766.1"
                     /translation="MLLCCKEVMAMLIVLLLVVIALVLYLFYALIRSEKF"
     gene            19896..21572
                     /gene="kdpA"
                     /locus_tag="O6Y56_000474"
     CDS             19896..21572
                     /gene="kdpA"
                     /locus_tag="O6Y56_000474"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit A"
                     /protein_id="HDB5573767.1"
                     /translation="MEIILFLTMMVMIAYVFSGYLYRVALVQSSRVDLIFTRFENMCF
                     KIIGTDLEHMSAKTYVKHFMAFNGFMGFITFVLLIVQQWLFLNPNHNLNQSIDLAFNT
                     AISFLTNSNLQHYNGESGVTYLTQMIVMTYLMFTSSASGYAVCIAMLRRLTGLTNIIG
                     NFYQDIVRFIVRVLLPLSCLISILLITQGVPQTLHANLMIRTLSGHIQHIAFGPIASL
                     ESIKHLGTNGGGFLAGNSATPFENPNIWSNFIEMGSMMLLPMSMLFLFGRMLSRHGKR
                     VHRHALILFVAMFFIFIAILTLTMWSEYRGNPILANLGIYGPNMEGKEVRFGAGLSAL
                     FTVITTAFTTGSVNNMHDSLTPLGGLGPMVLMMLNVVFGGEGVGLMNLLIFVLLTVFI
                     CSLMVGKTPEYLNMPIGAREMKCIVLVFLIHPILILVFSALAFMIPGASESITNPSFH
                     GISQVMYEMTSATANNGSGFEGLKDDTTFWNISTGIIMLLSRYIPIILQLMIASSLVN
                     KKSYHQDKYTIAIDKPYFGVSLIVFIVLLSGLTFIPVLLLGPIGEFLTLK"
     gene            21591..23618
                     /gene="kdpB"
                     /locus_tag="O6Y56_000475"
     CDS             21591..23618
                     /gene="kdpB"
                     /locus_tag="O6Y56_000475"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000546595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HDB5573768.1"
                     /translation="MHHVNKYFNQTMVIEALKMSFYKLNPKQLIKNPIMFVVEVGMIL
                     TLILICFPDIFGTSYLSRGYLITIFIILLITILFANFSEAFAEGRGKAQADSLRQAQS
                     NLTARLIEENDAYRIVNATELKAGQNIRVENGETIPADGVVINGLATVDESAITGESA
                     PVIKESGGDFDGVIGGTLVTSDWLEIRVESEAGTSFLDKMIALVEGAERNKTPNEIAL
                     FTLLTTLTIIFLVVIVTLYLIASYLHLILPIAMLIALTVCLIPTTIGGLLSAIGIAGM
                     DRVTQFNVLAKSGRAVEVCGDVDVMILDKTGTITYGNRIASEFLPVNQQMWEKLIVAA
                     YMSSIYDDTPEGKSIVRLAKQMYINELPKDIDGTYKPFTAETRMSGIITNEISVFKGA
                     PNSMINLVKQQQGDIPLNIESICMDVSSKGGTPLIVIENNVMLGVIYLKDVIKDGLVE
                     RFAELRKMGIETVMCTGDNALTAATIAKEAGVDRFVAECKPEDKIKVIKDEQAKGHIV
                     AMTGDGTNDAPALAQANIGLAMNSGTISAKEAANLIDLDSNPTKLIEVVKIGKQLLMT
                     RGALTTFSLANDVAKYFAILPALMMSTIPEMTSLNIMHLSSPKSAIISALIFNALIIV
                     ALIPIAMKGVKVKGYSIDRIFINNMLIYGLGGLIVPFLGIKLIDMIVQFFV"
     gene            23638..24198
                     /locus_tag="O6Y56_000476"
     CDS             23638..24198
                     /locus_tag="O6Y56_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
                     /protein_id="HDB5573769.1"
                     /translation="MNTIRNSICLTIITMVLCGFLFPLAITLIGQIFFYQQANGSLIT
                     YDNRIVGSKLIGQHWTDTRYFHGRPSAVGYNMNPEKLYKNGVSSGGSNESNGNTELIA
                     RVKHHVKFGNSNVTIDAATSSGSGLDPHITVENALKQAPRIADARHISTSRVTDLIQH
                     RMQRGVLTNDYVNVLELNIALDKMKD"
     gene            24407..24886
                     /locus_tag="O6Y56_000477"
     CDS             24407..24886
                     /locus_tag="O6Y56_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573770.1"
                     /translation="MSDYTKLSKSPKSALLYYYITNGLEFILSVAVYVIFYFIWLRFE
                     WPQYLIYILLVLGALSTLKLFIKPLWQYHCRFYQIDQLSVQYRTSFLIYKEETSRIER
                     LQYLSIKSNPISKVLNLYKVGFMTAGHTIYLPMMSHDDVKIIEARTMSNLRGVESDV"
     gene            24879..26462
                     /locus_tag="O6Y56_000478"
     CDS             24879..26462
                     /locus_tag="O6Y56_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HDB5573771.1"
                     /translation="MSEPQKLHPISYFNGIINAIKQNIVVFFIFVIFQLKDFDYTNPE
                     SYLWIGIVFVFFLISYISQIVGIMNTRYWIEDNYFILTTGIFNKKRKELNIKRIQSVD
                     MTQGVVNQIIGGVDLQIKTPSDGIVLSVISKKQGEYLERYIDQLQTELKTEMAQKSST
                     EQNGNRNHDIEGNVEDIAEGRLDEVQNSDSKLNQKNKRIPIYQMNFKESLFMAMTSGA
                     IGVTLAALLPIYGAVRELIPWSKLNHEISQWVQIVSVSVLIIILLVLILAYIIGTIIT
                     MIRFYGFSVMLENEQLKIEYGLFNKKKVTVPTKRLQAVVEHQSYIRRLFGYTAIHFII
                     TSDFENKKIEDDDNDSGSVSILPFIKRDKAYQIIQNLVPDLSYQQVNEGMPFSGFHRH
                     FLIPSIIVIAMAGIGCYFWNQLLLLFTIITVVIIGLFVIKGYLYVKHAGFKMTEEQIT
                     IQNFELLKRNIYYFKAHHIIGFDTWQHTLLKRNNLNNFSFIVAKGVGAQSINLKYARS
                     EDANKLKSWYLRGENDEGL"
     gene            26449..26940
                     /locus_tag="O6Y56_000479"
     CDS             26449..26940
                     /locus_tag="O6Y56_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HDB5573772.1"
                     /translation="MRDYNFMSPHAKKVMRLSAVLFWIPIALVLLIAFNILNWLFWEI
                     LDNYISIVSSVIIILLVAVFTLVIAPVYRYKHCRYAFEKHHLRVRNDILFLDEKVIPY
                     FRIQNIDIDVGPIMRRYRLATLTLYTAGGQAEIELIDRSEARRLKRWLNNERHLENNK
                     NEE"
     gene            26944..27303
                     /locus_tag="O6Y56_000480"
     CDS             26944..27303
                     /locus_tag="O6Y56_000480"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HDB5573773.1"
                     /translation="MIHGIGVDLIEIDRIKVLYSKQPKLVERILTKNEQHKFNNFTHE
                     QRKIEFLAGRFATKEAFSKALGTGLGKHVAFNDIDCYNDEFGKPKIDYEGFIVHVSIS
                     HTEHYAMSQVVLEKSAF"
     gene            27369..28517
                     /gene="alr"
                     /locus_tag="O6Y56_000481"
     CDS             27369..28517
                     /gene="alr"
                     /locus_tag="O6Y56_000481"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDB5573774.1"
                     /translation="MSDKFYRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKANAYG
                     LGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVLGVLPTKDIDKAIQHRVA
                     LTVPSKQWLKEAIKNISGEQEKKLWLHIKLDTGMGRLGIKDTKTYQEVIEIIQQYEQL
                     VFEGVFTHFACADEPGDMTTEQYQRFKDMVNEAIKPEYIHCQNSAGSLLMDCQFCNAI
                     RPGISLYGYYPSEYVQQKVKVHLKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTT
                     IALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVKVPDQVKAGDSVILIDN
                     HRESPQSVEVAAEKQHTINYEVLCNLSRRLPRIYHDGDQRFVTNELLK"
     gene            28602..28772
                     /gene="mazE"
                     /locus_tag="O6Y56_000482"
     CDS             28602..28772
                     /gene="mazE"
                     /locus_tag="O6Y56_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin MazE"
                     /protein_id="HDB5573775.1"
                     /translation="MLSFSQNRSHSLEQSLKEGYSQMADLNLSLANEAFPIECEACDC
                     NETYLSSNSTNE"
     gene            28769..29131
                     /locus_tag="O6Y56_000483"
     CDS             28769..29131
                     /locus_tag="O6Y56_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HDB5573776.1"
                     /translation="MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVA
                     AITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEV
                     DNALMISLGLNAVAHQKN"
     gene            29480..30481
                     /locus_tag="O6Y56_000484"
     CDS             29480..30481
                     /locus_tag="O6Y56_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000390648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HDB5573777.1"
                     /translation="MEEFKQHYKGLIDESLTCQDKVELIKKCEKYTDEVIRKDVLPED
                     IVDIHKNYILTLNLTREDVFKTLDVLQEIVKGFGYSYRDYQRLVDKLQVHDKEIDLAS
                     SLQQTMLKTDIPQFDSIQIGVISVAAQKVSGDYFNLIDHNDGTMSFAVADVIGKGIPA
                     ALAMSMIKFGMDSYGHSQLPSDGLKRLNRVVEKNINQNMFVTMFYGLYEEMNHLLYCS
                     SAGHEPGYIYRAEKEEFEEISVRGRVLGISSQTRYQQQEIPIYLDDLIIILTDGVTEA
                     RNSEGTFIDKQKLLEYIKKHKHMHPQDIVQIIYEAILKLQNPNKKDDMTILIIKRVN"
     gene            30600..30926
                     /locus_tag="O6Y56_000485"
     CDS             30600..30926
                     /locus_tag="O6Y56_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019468012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor antagonist"
                     /protein_id="HDB5573778.1"
                     /translation="MNLNIETTTQDKFYEVKVGGELDVYTVPELEEVLTPMRQDGTRD
                     IYVNLENVSYMDSTGLGLFVGTLKALNQNDKELYILGVSDRIGRLFEITGLKDLMHVN
                     EGTEVE"
     gene            30928..31407
                     /gene="rsbW"
                     /locus_tag="O6Y56_000486"
     CDS             30928..31407
                     /gene="rsbW"
                     /locus_tag="O6Y56_000486"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001190828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma B factor RsbW"
                     /protein_id="HDB5573779.1"
                     /translation="MQSKEDFIEMRVPASAEYVSLIRLTLSGVFSRAGATYDDIEDAK
                     IAVSEAVTNAVKHAYKEKNNVGIINIYFEILEDKIKIVISDKGDSFDYETTKSKIGPY
                     DKDENIDFLREGGLGLFLIESLMDEVTVYKESGVTISMTKYIKKEQVRNNGERVEIS"
     gene            31382..32152
                     /gene="sigB"
                     /locus_tag="O6Y56_000487"
     CDS             31382..32152
                     /gene="sigB"
                     /locus_tag="O6Y56_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigB"
                     /protein_id="HDB5573780.1"
                     /translation="MAKESKSANEVSPEQINQWIKEHQENKNTDAQDKLVKHYQKLIE
                     SLAYKYSKGQSHHEDLVQVGMVGLIGAINRFDMSFERKFEAFLVPTVIGEIKRYLRDK
                     TWSVHVPRRIKEIGPRIKKVSDELTAELERSPSISEIADRLEVSEEEVLEAMEMGQSY
                     NALSVDHSIEADKDGSTVTLLDIMGQQDDHYDLTEKRMILEKILPILSDREREIIQCT
                     FIEGLSQKETGERIGLSQMHVSRLQRTAIKKLQEAAHK"
     gene            32587..34737
                     /locus_tag="O6Y56_000488"
     CDS             32587..34737
                     /locus_tag="O6Y56_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HDB5573781.1"
                     /translation="MDNQLINSIIEKYQFSKKQIEAVLTLLEEKNTVPFIARYRKEQT
                     GGLDEVQIKQIDDEYQYMVNLQKRKEEVIKNIEQQGLLTEELKKDILKQNKLQRVEDL
                     YRPFKQKKKTRATEAKRKGLEPLAIWMKARKHEVSIEEKAQQFINEEVQSVEDAIKGA
                     QDIIAEQISDNPKYRTKILKDMYHQGVLTTSKKKNAEDEKGIFEMYYAYSEPIKRIAN
                     HRVLAVNRGEKEKVLSVKFEFDTTSVEDFIARQEINHNNVNRCYILEAIKDSLKRLIV
                     PSIEREIHADLTEKAENHAIDVFSENLRNLLLQPPMKGKQILGVDPAFRTGCKLAVIN
                     PFGTFIAKGVIYPHPPVAKKEAAEKDFVQMVKAYDVQLIAIGNGTASRETEQFVADLI
                     KKHQLPVQFIIVNEAGASVYSASEIARDEFPDFQVEERSAVSIGRRVQDPLSELVKID
                     PKSIGVGQYQHDVNQKALENALTFVVETAVNQVGVDVNTASSSLLQYVSGLSSQIAKN
                     IIAYREENGAIKHNKELSKIKRLGAKTFEQSIGFLRIVDGSEPLDNTSIHPESYKVTY
                     QLLDKLGFGGNDLGSDALKAKLNSLDMDELAIELQVGVPTLEDIIKSLKAPNRDPRDE
                     FETPILKSDVLSIEDLKEGMKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKN
                     PMDIVSVGDIVDVWIYSIDKNKDKVSLTMIDPHE"
     gene            34730..35185
                     /locus_tag="O6Y56_000489"
     CDS             34730..35185
                     /locus_tag="O6Y56_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family protein"
                     /protein_id="HDB5573782.1"
                     /translation="MNNDKLQRMVENLSEEKFGRTFRHCAYFNKRLRTTGGRYLLKSH
                     DIEINPKQYEHYGEDAIVKIILHELCHYHLHIAGKGYQHKDQDFKRLSQQVGAPRFCN
                     SIESYQQRANYEYYCTKCHAKYIRIRKVDTNRMRCGHCNGKLRMKRQLK"
BASE COUNT        12707 a         5120 c         6576 g        11354 t
ORIGIN      
        1 taattatata aaatttgcca ttttgaccat ttttaagcta gtaattaaga tataggcata
       61 ggaggtgaat cacacactac atgctaaata aaatcgtaat tgtcgggaga ctgacgaaag
      121 acgcacaaat atttgaaaag gaggatagaa aaattgcaac gttttgtgtt gcaacgcacc
      181 gaaattataa agatgaaaat ggagaaatcg tctgtgatta cttattctgt aaagcatttg
      241 gcaagttagc ttctaatata gaaaaatata ctaatcaagg tacattggtt ggtataactg
      301 gtcaaatgag atcaagaaag tatgataaag acggacaaac acactttgtc actgaattat
      361 atgttgaaac aataaaattt atgtccccta aatcccaaaa taatgaaatt ctctcagata
      421 gtattttaga tattgactct caaaatatag ataatcatga cttattagaa atttaaatcc
      481 aattatccta aacatcctta atatacattt aatccatcct aaatttttta tagatctaat
      541 taacttgaaa tatactcact taaaaacgac ttacatgact agtactgttg tgtaggtcgt
      601 ctttttgtgt agtttttcta atagaaaata gacatagatt gcaaaacgat tacataaaaa
      661 attgcaaatg aaaaacattt ttactgtcat gacaattctc gatagaatca tatctgaaat
      721 tatgggggat ttcgttgtaa tcactgtgta aaaaacaagg ctattttttt attttgttgt
      781 aacctgcacg gattttacag atgttacagt agtctctgta aaactgttag agaaacaaat
      841 tacttgtagg aggattttaa gattatgaag aaaacattac tcgcatcatc attagcagta
      901 ggtttaggaa tcgtagcagg aaatgcaggt cacgaagccc atgcaagtga agcggactta
      961 aataaagcat ctttagcgca aatggcgcaa tcaaatgatc aaacattaaa tcaaaaacca
     1021 attgaagctg gcgcttataa ttatacattt gactatgaag ggtttactta tcactttgaa
     1081 tcagatggta cacactttgc ttggaattac catgcaacag gtgctaatgg agcagacatg
     1141 agtgcacaag cacctgcaac taataatgtt gcaccatcag ctggtcaagc taatcaagta
     1201 caatcacaag aagttgaagc accacaaaat gctcaaactc aacaaccaca agcatcaaca
     1261 tcaaacaatt cacaagttac tgcaacacca actgaatcaa aagcatcaga aggttcatca
     1321 gtaattgtga atgatcatct aaaacaaatt gctcaacgtg aatcaggtgg caatattcat
     1381 gctgtaaatc caacatcagg tgcagctggt aagtatcaat tcttacaatc aacttgggat
     1441 tcagtagcac ctgctaaata taaaggtgta tcaccagcaa atgctcctga aagtgttcaa
     1501 gatgccgcag cagtaaaatt atataacact ggtggcgctg gacattgggt tactgcataa
     1561 gccatttatg catagctaac caatagttat ataagtaact tttagattgg aatatatcgg
     1621 ggaattctcg atatgttccg gtctttttta tttcgcaaat atatatgtca ttatagaatt
     1681 attatttaaa gataataata caactgagca acaataattg aaaatgttga aaccgtttgc
     1741 taagattaat ttgcaattga atactaagga actactaggg gagcctaatg atatggctga
     1801 gatgaactgt tcagaccctt atgacctgat ttggttagta ccaacgtagg aaagtagtta
     1861 ttgaagtgat ggggctagta tagcaacatt gccatcaaac tactttcatg ttggaagtag
     1921 tttttttatt tagggaggat ttttacaatg gaattttcac aaaaattgta ccaagctgca
     1981 aagccaatca ttaatgatat ttatgaggat gactttattc aaaaaatgct attaggcaat
     2041 atacaagctg atgcattacg tcactattta caagctgatg cagcttattt aaaagaattc
     2101 acaaacttat atgctttgtt aattccaaaa atgaatagca tgaatgacgt aaaattttta
     2161 gtagagcaaa tagaatttat ggttgaaggt gaagtacttg cgcatgatat tttagcgcaa
     2221 attgttggtg aatcatacga agaaatcatt aaaacaaaag tttggcctcc aagtggcgac
     2281 cattacataa aacatatgta tttccaagcg catagtcgtg aaaatgctat ttatacaatt
     2341 gctgcaatgg caccttgtcc atacatttat gcagaattag ctaagcgctc tcaaagtgat
     2401 cataagctta atagagaaaa agatacggca aaatggtttg atttttatag tactgaaatg
     2461 gatgacataa ttaacgtatt tgaggcatta atgaataaat tagccgaatc aatgtctgac
     2521 aaggaattgg aacaagtgaa acaagtattt ttagaaagtt gcatacatga gcgtcgattt
     2581 ttcaatatgg ctatgacact agaacaatgg gaatttggag gaaaagtaaa tgattaaacc
     2641 taaaatagca ttaaccattg caggtactga tccaacaggt ggtgccggcg taatggctga
     2701 tttaaaatca tttcattcat gtggtgtata tggtatgggc gtcgttacaa gtattgttgc
     2761 tcaaaataca ttgggcgtac aacatattca taatttaaat catcaatggg tagatgaaca
     2821 acttgatagt atcttcaacg ataccttacc gcatgctatt aaaacgggga tgattgctac
     2881 agcagatatt atggaaacga ttcgtcatta tttaatgcaa catgaatcta ttccgtatgt
     2941 aattgatcct gttatgttgg cgaaaagcgg tgattcatta atggataatg acacaaagca
     3001 aaacttgcag catacgttat tgccattagc tgatgtagta acaccgaatt taccagaagc
     3061 tgaagaaata acgggactaa ccattgatag tgaagaaaaa attatgcagg ctggccgcat
     3121 ctttattaat gagattggta gtaaaggtgt catcattaaa ggcggccatt caaatgatac
     3181 tgatatagca aaagattatt tatttactaa agaagatgtt caaacatttg aaaatgaacg
     3241 atttaaaaca aaacatacgc atggaacagg gtgtacattt tcagcagtta taacggcaga
     3301 acttgcaaaa ggtagaccat tatttgaggc tgtatacaag gctaaaaagt ttatttcaat
     3361 gagtatacaa tatacgcctg aaatcggccg tggtagaggt ccggtgaatc attttgcata
     3421 tttaaagaaa gagggattag acgatgaatt atctaaataa aatacgtatt gaaaacccat
     3481 taacaatttg ttatacaaac gatgtagtta aaaattttac agcgaatggt ttattaagta
     3541 ttggtgcgag ccctgcaatg agtgaagctc ccgaagaagc tgaagaattt tacaaagttg
     3601 cacaagcgct attaatcaat atcggtactt taacagcaca aaatgaacaa gatattattg
     3661 cgattgctca aacggcaaat gaggcaggct tacctattgt atttgaccct gtagctgttg
     3721 gtgcttctac atatcgaaag caattttgta aattattatt gaaatcagcg aaagtatcag
     3781 taattaaagg caatgcatct gaaatattag cgttgattga tgatacagca actatgaaag
     3841 gtacagatag tgatgctaat cttgatgcgg ttgcaatagc gaaaaaggct tacgcaatat
     3901 ataaaactgc aatagtaatc acaggtaaag aggacgttat tgttcaaggt gataaagcaa
     3961 tcgtattagc taatggatct ccattattag cacgagtaac tggagccggt tgtttattag
     4021 gaggcgttat tgctggattt ttatttagag aaacagaacc agacatagaa gcgttaattg
     4081 aagcggtaag cgtatttaat attgctgctg aggtagctgc tgaaaatgaa aattgtggtg
     4141 gtcctggtac gttttcacca ttgttgcttg atacgttata tcatttaaat gaaacaacct
     4201 atcaacaacg gattcgcatt caagaggtgg aataatatgt ttaaccaatc gtatctaaat
     4261 gtgtatttta tttgtgggac ctccgatgtt ccgagtcatc gaactattca tgaagtatta
     4321 gaagcagcat taaaggcagg gattacactt ttccaatttc gagaaaaggg tgaatcagct
     4381 ttaaaaggaa aagataaact tgtattagct aaagaattac agcatctctg tcatcaatat
     4441 gatgtgcctt ttatcgttaa tgatgatgta tccttagcaa aagaaattaa cgcggatggt
     4501 atacatgtcg gtcaagatga tgcgaaagtc aaagagatag cacaatattt cactgataaa
     4561 attattggac taagtattag tgatttagat gagtatgcaa aatctgattt aactcatgtt
     4621 gattatatag gtgttggacc aatctatcct acgccgtcga aacatgacgc gcatacacca
     4681 gtaggtccag aaatgattgc aacatttaaa gaaatgaatc cgcaactacc gattgtagct
     4741 attggcggta taaatactag taacgtggcg ccgattgtag aagcaggtgc caatggaatt
     4801 tcagtcattt cagccatttc taaaagtgaa aatattgaaa agactgttaa tcgattcaaa
     4861 gattttttta ataattagtt aaatttttcc acttattgtt tcatacgtac tcattaatgt
     4921 gatagaataa atcctatgtg aatataatga tagaggtgga aaaatgaaga aaaaagcgtt
     4981 actaccatta tttttaggta ttatggtctt tttggctggt tgtgactatt ctaaacctga
     5041 aaaacgtagt gggtttttct acaatacatt cgtagatcca atgaaaaatg tattggattg
     5101 gttgggaaat aacttattaa acgacaatta tggtttagct attattatcc ttgtattggt
     5161 aattcgtatt attttattac cattcatgtt gtcaaactat aaaaatagtc atatgatgcg
     5221 tcaaaaaatg aaagttgcaa agccagaagt tgaaaaaatt caagaaaaag tgaaacgtgc
     5281 gcgtacacaa gaagaaaaaa tggctgcaaa ccaagaatta atgcaagtat ataaaaagta
     5341 tgacatgaac ccgattaaga gtatgttggg ttgtttacca atgctaatcc aattgccaat
     5401 catcatggga ttatactttg tacttaaaga ccaacttgta gatggtttgt ttaaatatcc
     5461 acacttctta tggttcgatt taggacgtcc tgatatttgg attacaatta ttgccggagt
     5521 tttatacttt atccaagcat atgtatcaag caaaacgatg ccagacgaac aacgtcaaat
     5581 gggttacatg atgatggtca tttcaccaat tatgattatc tggatttcat taagctcagc
     5641 atcagcactt ggtttgtact ggtcagtcag tgcggcgttc cttgtagttc aaacacactt
     5701 tgcgaacatt tattatgaaa aagtcgctaa aaaagaagta caacctttca tagaagcgta
     5761 tgaaagagag cacaacggcg gcagcaataa aaaaggcaaa aacacacaag tagtgtctaa
     5821 aaagaaaaag aaataacctt agcaagtcca aataatgtgc cccctaaaag ttgaagataa
     5881 ttttaacttt atagggcgca cattattttt cgcttcaata gcgaaactta gtgtcacatt
     5941 atacaatatg ttataaatag aaacagcagt aagatgattt caaatgtgaa agtcatccta
     6001 ctgctgtttt tatttgaaat aatattaacg agatttcagt atgtaaaaag tggttaacaa
     6061 cagagttgcc attcttcatt gcaatgtcat cttgacacaa tgattcatca gtgtagcagt
     6121 atatgtcgca acatttccac agcaattcac taatacatgt aacagtgtga aataataacg
     6181 tcacaacggc gtaatacaca ttgcaacgtc ccaacaacac atcatagaat cgtaacggca
     6241 tggcatcaac actaaaccgg tctataacac cataacaccg caacgccaca tcatagcact
     6301 acatcaagtc gcgtcatagt accagcacat caaagtagca tggcatcaac accaaaccgg
     6361 gctataacac cataacaccg caacgccaca tcatagcact acatcaagcc gcatcgtggt
     6421 accagcacat caaagtagca tggcatcaac accaagcttc cacaacaaca catcaaagta
     6481 acatggcatg acaccaagct tccacaacaa tacgccatta catcgcatca tcatactaca
     6541 actccaatgt ctagttgtga taattccatt ccgtaaaaaa ctgtttcaag tacatcatca
     6601 taaagtcgtg acgttcttta gcaatcatct tcgccgtatc tgtatgcatt aaagattcta
     6661 acttaagtaa tttttcaaag aaatgtttaa ttgcagatgg tggcagctgt tcaactaaat
     6721 catcattaat cttatctagt gacatatgtt ctgtccacat aggttcacca aagtgtcctg
     6781 caaattgaaa tgttcgtgca acacctatag cgcctatagc atcaagacga tctgcatccc
     6841 tgacaatttg accttctaaa gataaagtga catgatcgtt tttaccattg cgatagctca
     6901 tattattaat aataaataaa atgtgctctt gatcttcggt tgatagtgat aaagaagata
     6961 aaaatgactt caattcaaca tattgtttgt tagcatctac aactttttcg tcaacggtat
     7021 catgaagcaa acatgcgagt tcaatgacta aagtatcatt aacaccttca ttttcagcga
     7081 ttgatttagc taaagcagtg acacgatata catgcgcaat atcatggcct gtataatcat
     7141 tatgatgaat agattccata tattttttgg ctgcactaat gatgtctgat tgttgcatta
     7201 aagttacact cctcatattt ctattttata agataggtga caataattgt gaaatacctt
     7261 ctttaaattt aatccaaaga cttcgcttag cataacgtgc ttttgttaat tcagaagata
     7321 ctgctaaatc atctataaaa gcttgcttta attttttggc aatttgttgg tcataaataa
     7381 aagcgttgac ttcgaaattc aatgtgaaac tgcgatggtc catattagct gttcccacac
     7441 ttgcaatttc atcatctata acaagtgttt ttgagtgtaa aaagccattg tcgtagtgaa
     7501 atactttaac accggcatct aataaggatg ctgcattttt taaagtagcc caaaaaacaa
     7561 acggatggtc aggtttatta ggaatcatga tattgacatc aacaccacct aatgccgcaa
     7621 ttttaataga atctaaaaag gcttgatcag gtatgaaata gggagattga atataaatcg
     7681 attttttagc agatgaaatc attttcaaat aaccgtattt aatctgttcc cattcttcgt
     7741 caggaccact agaagctatt tgaacgccaa ttgttccacc agaatttaca tctgggaaat
     7801 aacgatcatc ataggagatg tggtcacgtg tggcttgtga attccaatct agaataaatc
     7861 gtaattgcaa tgcattcact gcatccccga caattcgtaa atgcgtatct cgccaatagc
     7921 cgaatttttt tgatttacct aagtactcat caccaacatt aaaaccacca acatatccaa
     7981 tttgcccatc tattacaaca atttttcgat ggtttcgatt gttcatacgc aagttaatta
     8041 aaggtaattt tgatgggaaa aatgcttcag catgtccacc tttattgcga aacgggcgta
     8101 agcctttttt acgcagtcca cgagaaccca tgtcatcata aagaatttta acttctacac
     8161 cttgttccgc ttttttacca agttcattta aaatggtacg acctaattca tcattttgaa
     8221 taatatagta ctgaaaatga atataatcag tagcattacg gatgtcttgt attaagtcat
     8281 caaatttttc ttggccgtct gtgtatattt ttaaatcgtt gtctgttgtt aaaaatgctg
     8341 cgttattata taacaacatt tgaatcattt ctttaaattt tacaatttga taattggaat
     8401 ttgaaaagtt ttcatttttt aaagcagcta attgctcatc aacgattaac tctaatcctt
     8461 ttttatcttc cttatcaatt ttgaaaattt ggtcacgttg aatttgtcgt cctaatagta
     8521 agtataaaat gaagccgaat aaaggcaaga aaactaagac tagtaaccaa gcccagatag
     8581 aattggcaga acgtctttcc atgaaaataa tggtaaaggc gaataataag tttaaaataa
     8641 atgcaccaat aaatattgaa tttaaaataa tattagaatg cttgagtgca atggataata
     8701 actctatcat ttgaaacctc ccatcgaaaa tcttaaacga gtagtatatc ttattaattg
     8761 tatcatgaag caatttaaat atcatgacaa tttagtttga aaaacacact ttgtgttgac
     8821 gttgtgtttt atgggatata gtatagtaag gaatgtaaat gaaggagtga atgctatgac
     8881 tgaacaagat aatgcacatc attctgaaca aataaaaacg aatcttaaat cacgtttaaa
     8941 tcgaattgaa ggacaagtga gagcgattaa tcgcatgatt gaagaagatg tctattgtga
     9001 tgatgtcctt acgcaaataa gagcgacacg ttcggcgtta aacagtgttg cgacaaagtt
     9061 attagaacaa catatgaaaa gttgtattat gaataaagtt aatcaaggtg ctcaggaaga
     9121 ggcaatggaa gagttattag tgacttttca aaaattgatt aaagactaaa ggagtttaag
     9181 atgatacatc aaaatacgat ttacacagcg ggaattgaaa cagaagaaca agtaagtcaa
     9241 ttgacagaac gcatttcaaa tatgataggt gttcatcaag tgaatattaa tataatagac
     9301 ggtcaagtaa ctgtatcata tgaaacacca gcaaatttga atagtattga aaaagaaatc
     9361 tatgatgaag gatacaaaat tgtattttag ggtataatgt agagtgcgct atagatttta
     9421 attttgaaaa taaatcaaaa attttgtaaa tgatgtagta aaggtatgtc gaatagggta
     9481 agataatatt gaaagcgatc caaacgaggt gataataatg aaacgtcctg aaaagattca
     9541 aaatgtagtc aaactattgt catcattagg tgtgaatatt aaaaaaacta aatctcgttt
     9601 agacattatt aatactttgc cagcatctaa taaagtaagt cacgaattaa aataattgac
     9661 tgtgattgtg aatcacacac cgttaaagct atcgtcggac tattcgatga tagctttttt
     9721 gactggattt actaaaatga aagcaagtac tatataacaa aatccctctt tagagtgtac
     9781 attttacaat gtgtacttca aagagggatt gttattatcg agtaatatct atatacgaca
     9841 ttttaaatcg acgacgtaaa tagactatat aacgtcatat tgaaaagtta tgatatttga
     9901 aactcaaaat agtttaaatt aattactttt tggatggtat aaatcgacat atcgttttgg
     9961 ttcatgataa taaattgata agactatacc tattccggtc atcatactcc atagtgcact
    10021 accaccataa ctaataaatg gtaatggaat accagtgatt ggtaacaact gaattgtcat
    10081 accaatattt tgtaaaatat ggaacacaag taaagtgacg aaaccaacga taaagatttt
    10141 gttaaattga tcttcaattt tcgcagctaa tcttattaga tggaagatta aaaataaaaa
    10201 tattaagatc aatatgacag aaccgataaa gccaagttcc tctccaataa ctgaaaagat
    10261 aaagtcagta tgattttcag gtatataaac ttcaccgtga ttgtatcctt tacctagtaa
    10321 ctgtccagaa ccgatagctt taagtgattc agttaaatga tagccatcac cactactata
    10381 tgtatagggg tcaagccatg aattgattcg tcccatttga tatagttgga cacctaataa
    10441 attttcaatt aatgcgggtg catatagaat acctaaaatg actgtcattg caccaacaat
    10501 acctgtaata aagataggtg ctaagatacg ccatgttata ccacttacta acatcacacc
    10561 tgcaataatt gcagctaata ctaatgtagt tcctaggtca ttttgcagta atattaaaat
    10621 acttggtact aacgagacac caataatttt gaaaaataat aacaaatcac tttggaatga
    10681 tttattgaat gtgaattgat tatgtctaga aacgacacgc gctaatgcta aaattaaaat
    10741 aattttcatg aattcagatg gttgaatact gatagggcca aacgtgtacc aacttttggc
    10801 accattgata ataggtgtaa taggtgactc aggaataacg agcaagccta ttaataaaag
    10861 acagattaag aaatacaata aatatgtata atgtttaatc tttttaggtg aaataaacat
    10921 gatgatacct gcaaaaattg cacctaaaat gtaataaaaa atttgtctga taccgaaatt
    10981 agcactgtat tgaccaccgc ccattgccga gttaataagc agaacactga aaattgctaa
    11041 aacagctata gtggctacta atacccagtc tactttgcga agccaatgct tatccggctg
    11101 ttgacgagat gaataattca ttgcaaactc cttttatact cactaatgtt tatatcaatt
    11161 ttacatgact ttttaaaaat tagctagaat atcacagtga tatcagctat agatttcaat
    11221 ttgaattagg aataaaatag aagggaatat tgttctgatt ataaatgaat caacatagat
    11281 acagacacat aacgcctcgt ttttaaaatg caaaatagca ttaaaatgtg atactattaa
    11341 gattcaaaga tgcgaataaa tcaattaaca ataggactaa atcaatatta atttatatta
    11401 aggtagcaaa ccctgatata tcattggagg aaaacgaaat gacaaaagaa aatatttgta
    11461 tcgtttttgg agggaaaagt gcagaacacg aagtatcgat tctgacagca caaaatgtat
    11521 taaatgcaat agataaagac aaatatcatg ttgatatcat ttatattacc aatgatggtg
    11581 attggagaaa gcaaaataat attacaactg aaattaaatc tactgatgag cttcatttag
    11641 aaaatggaga ggcgcttgag atttcacagc tattgaaaga aagtagttca ggacaaccat
    11701 acgatgcagt attcccatta ttacatggtc ctaatggtga agatggcacg attcaaggac
    11761 tttttgaagt tttggatgta ccatatgtag gaaatggtgt attgtcagct gcaagttcta
    11821 tggacaaact tgtaatgaaa caattatttg aacatcgagg gttaccacag ttaccttata
    11881 ttagtttctt acgttctgaa tatgaaaaat atgaacataa cattttaaaa ttagtaaatg
    11941 ataaattaaa ttacccagtc tttgttaaac ctgctaactt agggtcaagt gtaggtatca
    12001 gtaaatgtaa taatgaagcg gaacttaaag aaggtattaa agaagcattc caatttgacc
    12061 gtaagcttgt tattgaacaa ggcgttaacg cacgtgaaat tgaagtagca gttttaggaa
    12121 atgactatcc tgaagcgaca tggccaggtg aagtcgtaaa agatgtcgcg ttttacgatt
    12181 acaaatcaaa atataaagat ggtaaggttc aattacaaat tccagctgac ttagacgaag
    12241 atgttcaatt aacgcttaga aatatggcat tagaggcatt caaagcgaca gattgttctg
    12301 gtttagtccg tgctgatttc tttgtaacag aagacaacca aatatatatt aatgaaacaa
    12361 atgcaatgcc tggatttacg gctttcagta tgtatccaaa gttatgggaa aatatgggct
    12421 tatcttatcc agaattgatt acaaaactta tcgagcttgc taaagaacgt caccaggata
    12481 aacagaaaaa taaatacaaa attgactaac tgaggttgtt attatgatta atgttacatt
    12541 aaagcaaatt caatcatgga ttccttgtga aattgaagat caatttttaa atcaagagat
    12601 aaatggagtc acaattgatt cacgagcaat ttctaaaaat atgttattta taccatttaa
    12661 aggtgaaaat gttgacggtc atcgctttgt ctctaaagca ttacaagatg gtgctggagc
    12721 tgctttttat caaagaggga cacctataga tgaaaatgta agcgggccta ttatatgggt
    12781 tgaagacaca ttaacggcat tacaacaatt ggcacaagct tacttgagac atgtaaaccc
    12841 taaagtaatt gccgtcacag ggtctaatgg taaaacaacg actaaagata tgattgaaag
    12901 tgtattgcat accgaattta aagttaagaa aacgcaaggt aattacaata atgaaattgg
    12961 tttaccttta actattttgg aattagataa tgatactgaa atatcaatat tggagatggg
    13021 gatgtcaggt ttccatgaaa ttgaatttct gtcaaacctc gctcaaccag atattgcagt
    13081 tataactaat attggtgagt cacatatgca agatttaggt tcgcgcgagg ggattgctaa
    13141 agctaaatct gaaattacaa taggtctaaa agataatggt acgtttatat atgatggcga
    13201 tgaaccatta ttgaaaccac atgttaaaga agttgaaaat gcaaaatgta ttagtattgg
    13261 tgttgctact gataatgaat tagtttgttc tgttgatgat agagatacta caggtatttc
    13321 atttacaatt aataataaag aacattatga tctgccaata ttaggaaagc ataatatgaa
    13381 aaatgcgacg attgccattg cggttggtca tgaattaggt ttgacatata acacaatcta
    13441 tcaaaattta aaaaatgtta gcttaactgg tatgcgtatg gagcaacata cattagaaaa
    13501 tgatattact gtgataaatg atgcctataa tgcaagtcct acaagtatga gagcagctat
    13561 tgatacactg agtactttga cagggcgtcg cattctaatt ttaggagatg ttttagaatt
    13621 aggtgaaaat agcaaagaaa tgcatatcgg tgtaggtaat tatttagaag aaaagcatat
    13681 agatgtgttg tatacgtttg gtaatgaagc gaagtatatt tatgattcgg gccagcaaca
    13741 tgtcgaaaaa gcacaacact tcaattctaa agacgatatg atagaagttt taacaagtga
    13801 tttaaaagcg catgaccgtg tattagttaa aggatcacgt ggtatgaagt tagaagaagt
    13861 cgtaaatgct ttaatttcat agagattagt cgagcgacct tttacttata aaaatgtttt
    13921 gaattaatac taaaagatta caaagaagag gtggttttgt gtgtaaatac aaaattgcct
    13981 ttttcttttt atgttaaatc tataaatttg aaactaaatc aaggttaatt ctatgtacac
    14041 actttatata ggaagtagtt tgaatgttta tataatattt tacaaaaaga tgtagtatta
    14101 taatgtctaa tttcacatgt gtttcagtaa aatttgttgt ggaatgttaa cgatatacgt
    14161 attttataaa aaatttttta taatgattat tcgaatgatg cgtaacgctt acatcttatc
    14221 taatgctagc tttttgacaa aaatatgaca atcaattaat gtgattctaa taaatattcg
    14281 caaattgctt tattgcgatt aaattttttt ggtggtacta tatagaagtt gatgaaatat
    14341 taatgaactt atatgcaaaa gtatattgag aaataaacag gtaaaaagga gaattatttt
    14401 gcaaaatttt aaagaactag ggatttcgga taatacggtt cagtcacttg aatcaatggg
    14461 atttaaagag ccgacaccta tccaaaaaga cagtatccct tatgcgttac aaggaattga
    14521 tatccttggg caagctcaaa ccggtacagg taaaacagga gcattcggta ttcctttaat
    14581 tgagaaagta gtagggaaac aaggggttca atcgttgatt ttagcaccta caagagaatt
    14641 ggcaatgcag gtagctgaac aattaagaga atttagccgt ggacaaggtg tccaagttgt
    14701 tactgtattc ggtggtatgc ctatcgaacg ccaaattaaa gccttgaaaa aaggcccaca
    14761 aatcgtagtc ggaacacctg ggcgtgttat cgaccattta aatcgtcgca cattaaaaac
    14821 ggacggaatt catactttga ttttagatga agctgatgaa atgatgaata tgggattcat
    14881 cgatgatatg agatttatta tggataaaat tccagcagta caacgtcaaa caatgttgtt
    14941 ctcagctaca atgcctaaag caatccaagc tttagtacaa caatttatga aatcaccaaa
    15001 aatcattaag acaatgaata atgaaatgtc tgatccacaa atcgaagaat tctatacaat
    15061 tgttaaagaa ttagagaaat ttgatacatt tacaaatttc ctagatgttc atcaacctga
    15121 attagcaatc gtattcggac gtacaaaacg tcgtgttgat gaattaacaa gtgctttgat
    15181 ttctaaagga tataaagctg aaggcttaca tggtgatatt acacaagcga aacgtttaga
    15241 agtattaaag aaatttaaaa atgaccaaat taatatttta gtcgctactg atgtagcagc
    15301 aagaggacta gatatttctg gtgtgagtca tgtttataac tttgatatac ctcaagatac
    15361 tgaaagctat acacaccgta ttggtcgtac gggtcgtgct ggtaaagaag gtatcgcggt
    15421 aacatttgta aatccaattg aaatggatta cattagacaa attgaagatg ctaatggtag
    15481 aaaaatgagc gcacttcgtc caccacatcg taaagaagta cttcaagcac gtgaagatga
    15541 catcaaagaa aaagttgaaa actggatgtc taaagagtca gaatcacgct tgaaacgcat
    15601 ttctacagag ttgttaaatg aatataacga tgttgattta gttgctgcac ttttacaaga
    15661 gttagtagaa gcgaacgatg aagttgaagt tcaattaact tttgaaaaac cattatctcg
    15721 caaaggccgt aacggtaaac caagtggttc tcgtaacaga aatagtaagc gtggtaatcc
    15781 taaatttgac agtaagagta aacgttcaaa aggatactca agcaagaaga aaagtactaa
    15841 aaaattcgac cgtaaagaga agagcagcgg tggaagcagg cctatgaaag gtcgcacatt
    15901 tgctgaccat caaaaataat ttatagatta agagcttaaa gatgtaatgt cttgagctct
    15961 ttttttgttt tcaataactg attctctgta gatatcaaag tactaacgtt ttaaaggtta
    16021 aatatttaat tggattgaga gttgtgtgcg gttatatcat tctgtgtaaa tataaatacg
    16081 aatctagaat ataacaacta cttaaattaa gaataatcga acataaataa actttatgaa
    16141 atttcagtat catgttcttg taaaaaaaat agggcatttt gctgacactg gtgcgcgata
    16201 aataataagt tgaatataaa aaagatcact gccaatcatt cgtttaatgg cagcgatctt
    16261 tttttattta attatttttc tttccactgc aacatttgat aaccaatgcg tggatgtgtt
    16321 ttaataatat cttttgcgtc atcgtgacat tgtgaaagtt tttgtcttaa tgatgtcata
    16381 tgcactctta aactcggcat ttcagtctta ttaacatagc catatattcg ttttaatatc
    16441 atctcataag tgagtacttt tcctttatga tttgacaata gttctaacaa gctaaattca
    16501 tttggtgtca aatgtacctc ctgattatta ataacaacag atttggagcc aaagtcgatg
    16561 cttagcaaac cgttagtaaa tacaatgtta gtttcttgat gtgacttagc gattctttcg
    16621 atgactcgaa ttcgtgcccg aagctcatca acattaaaag gtttagtcat atagtcattc
    16681 gcaccgttat ctaaagcttg aataattgtt tgttcttctt gtcttgcact tattacaatg
    16741 ataggaatgt cagtatgttg tctgatttct gaaatcaaac ataatccatc tttatctggt
    16801 aaacctaaat ctaataaaat gacatctggt ttatcaattt gaattttaaa gtgtgcttgt
    16861 gtggcatttt cggctgtagt tacattgtaa taatctaaag ttaatgcaac atcaattaaa
    16921 tgtgtgattg cgtgatcatc ttcaattatc aatattttag attgcattat atgtctcctt
    16981 cattaaagtc tgtatctata ttgaaataga atatactgcc gtgtggttgg ttcggattat
    17041 attgtaagtt tgattgatgt ttgtgtagga tagtctgtac taaatataag cctagtccca
    17101 tgctttcttt ttggttatct ttaaaatatt tatttgatcc tgtgtaaaaa ggttcgaata
    17161 tcttttgttg ttcttctaaa ctaattccag gtccttcgtc tataacggca aattcgattt
    17221 gttcatcgct agcataacga atagataaat tgattttggt gtcagtagaa gtgtgtttaa
    17281 ctgcattttc aatcaaattg aataaagctt gtaaaatcaa cttactgtca atgtgtataa
    17341 actgtaaatc tactgaggat gatacagtta tacgcttttt taaatggcga cgttctaaaa
    17401 tcatatcgat ttcttctact aattcactaa cgagataagg ttgcaatttt atctgaacat
    17461 ttgatgactg taattttgtt aatgataaaa tatttgtcac taatagatat aaatactgac
    17521 tttcttgaaa actatgcaca agtaattgtt ccttttctat gatagacata tctttactat
    17581 gtgatactaa aatatctaaa tttcccataa ttgttgttaa cggtgtacgt atgtcatgtg
    17641 aaattgatct taaaaaattt gaatgtgtca gttgacgttc agcctgtaac atggattctc
    17701 tcgtttgttt aagtaacgtc acattttcaa cggcgagaga aagttcattt aacattgatt
    17761 ctaatattga tgcatcatat ggattaatca cttgagaact ttggtaatca atggctagaa
    17821 tgcctttaat cggagatgtg ccaattggta tcaaccattt attaatgcct ggaaatgtat
    17881 ctgttgttgc accagcttgt ctttcatttt taattaccca gcttaatgct tgttcatgct
    17941 gttgagtcgt attatcgata tggttttgca atggtattgt tttaattact ttggattgat
    18001 tgataacgta tatagtaatt gattgttgca ataattgatt aatttggtat ccagcattta
    18061 ttagtaagtt ttcaactgta taagtttgtt taatcgaatc attaaattga aataataaat
    18121 ctgtacgata gagttgcttt ttagtaatgg agtattggaa tttaatttgt tttaataaag
    18181 cactcgttaa aatacttgtt aaaatgctaa cgataaatgt aataggatag tcaaagcggt
    18241 atacttcaaa tgtatatcta ggttccgtaa aaaaataatt aaaaacaaat acgttaataa
    18301 ttgctgctaa aaagccaatg atgtaggacc gcgtccaaat ggataataaa atgatgccga
    18361 tgagaaaaat cattaaaata atcgtactag actcatgctt atcaagttga taaatccata
    18421 gtcccatcat tacacaaatt atttgaatca aaatcatttt taacatatct atggcgaaac
    18481 gtttgccttt aggacgatag ggtgacttgt tcattttcaa ttcaacaggt atttgtttga
    18541 ttggaacgat ttcaatttta tagctatgtt caaaggacat taaatggtca attaaaggtt
    18601 tattgaaaaa gtctcgccac ttatttctaa tatgttgtcc gataattaat ttggttacat
    18661 cttgattttt acaccattcg tctaatccta atgcaacggt ttggctataa actactttta
    18721 cttttgctcc taatgatttt gcaagcatga gatgttgatg cacttgcttt tgactatctt
    18781 tatattgcct gtttttttcg aatacatcta tataaatagc agtgaatttt gcatgttctt
    18841 tttgagcaat atggaatgcc tctttaatta ctgcttcatt ataaatgctc ccactaattg
    18901 ccacagcaat atgaggtttg agtgacgttt tatggttgtg tcggactttt tctttatcac
    18961 tcatcaagtc ggcaactgtt cttaacgtca atgtacgcag ttcgcttagg tgggcatacg
    19021 taaagaaatt acaaaatgct acatctagcc tatccttttt atataccttg ccagctttta
    19081 agcgtttaat taattgttca ggtgagatat ctacgacttc taatacatcg gcgctcatta
    19141 tgaaatagtc gggtacacgt tctttaacat gtacaccggt catcagttca atttgactac
    19201 ttaaactttc aatatgttga atgttcaaag tagtatgaac atcgatacca tgatttaaaa
    19261 tttcttcaat atccatatat cgtttctcat gacgatctct agaaatgttc gtatgtgcta
    19321 actcatcgat aagtactatt gtcggcgatt cttcgattat gcggtcgaca tctaaatatt
    19381 gaaaatgatg actaccatgt ttagtaaaat tggttgcgat tttaggtaat tgttcagcta
    19441 atgcatttgt ttcatcacgt tgatgcggtt caatatatcc tattttaata tcaacgttac
    19501 tttgaaatag ttcaatggca tttgaaagca tctcaaatgt tttaccaaca cctggactgt
    19561 aaccgatgta aattgttaaa gatccacgct tttttcctat gtttagcgat tcagtgtttg
    19621 acataacctt cacctcgata gcaatatcat aatattcttc acaattaaat gctataaaat
    19681 ttatttctgc atacacatct taatgatttc ttaataacta agtttgaaaa ttaatatttc
    19741 tctcataaac aagttgttac gatgttgttg tgttgtaagg aggttatggc aatgctcatc
    19801 gttttattat tggtagttat tgcattagtt ttgtatttat tttatgcctt aattcgtagt
    19861 gaaaaatttt agaaatacat taagtgaggg ttatcatgga aataattttg tttctaacaa
    19921 tgatggttat gattgcgtat gtttttagtg gatatctata tcgcgtagca ttggtgcaat
    19981 cgtcaagagt agatttaata tttactagat ttgaaaatat gtgttttaaa attatcggca
    20041 cagatttaga acatatgtca gctaaaacat atgtcaaaca ttttatggca tttaatggat
    20101 ttatggggtt tataacattt gtattgctaa tagttcagca atggcttttt ttaaatccaa
    20161 atcataattt aaaccaatcg atagatttag cgtttaatac agcaatatct tttttaacaa
    20221 atagtaattt acaacactat aacggtgaat caggtgtgac atatttaacg caaatgattg
    20281 taatgacata tttaatgttt acatctagtg catcaggtta cgccgtttgt atagcgatgt
    20341 tgagacgttt aactggattg actaatatca ttggtaattt ttatcaagat attgttcggt
    20401 ttattgtccg agtactttta ccattatcat gtttaattag tattttattg ataactcaag
    20461 gtgtaccaca aacgttgcat gctaatttaa tgattcggac tttaagcgga catattcaac
    20521 atattgcatt tggacctatt gcatcacttg aatcaataaa acaccttggt acaaatggtg
    20581 gaggattttt agcaggaaat tctgcaacac cttttgaaaa tccaaatatt tggagcaatt
    20641 ttatagaaat gggcagtatg atgttacttc ctatgtcaat gttgttctta tttggtcgaa
    20701 tgttaagtag acatggtaaa cgagtgcatc gtcatgcgct aatattattt gtcgcaatgt
    20761 ttttcatttt tatagcaatt cttacattaa ctatgtggag tgagtatcgt ggtaatccaa
    20821 tactagcgaa tttaggcatt tatggaccga atatggaagg taaagaggta cggtttggag
    20881 caggcttgtc agcactattt acagttatta cgacggcatt tacaacgggt tctgttaata
    20941 acatgcatga tagcttaacg cctctaggtg gattaggacc aatggtatta atgatgctaa
    21001 atgttgtatt tggtggcgaa ggcgtaggac tcatgaattt attgatattt gtcttactga
    21061 cggtgtttat atgcagtttg atggttggta aaacaccaga atatttaaat atgccaattg
    21121 gcgcccgtga aatgaaatgt attgtcttag tctttctcat acatccaatt ttaattttag
    21181 tattttcagc acttgctttt atgattcctg gagcaagtga aagtataacg aatccgtctt
    21241 ttcatggtat ctcacaagtt atgtatgaaa tgacgtcagc tacagcgaac aatggatcag
    21301 ggtttgaagg actgaaagat gatacaacat tctggaatat ctctacagga atcattatgt
    21361 tgctttctcg ttatatacca attattttgc aattaatgat tgcatcaagt ttagtgaata
    21421 aaaaatcata ccaccaagat aaatatacaa tagcgattga taaaccttat tttggcgtat
    21481 cactaatcgt atttatcgtt ttactaagtg gtttgacgtt tattccagta ctattacttg
    21541 gtcctattgg tgaattttta actttaaaat aaagtaaagg gatggaaaaa atgcatcatg
    21601 taaataaata tttcaatcaa acaatggtga tagaagcttt gaaaatgagt ttttataagc
    21661 tgaatcctaa acaattaata aaaaatccga taatgtttgt cgtcgaggtt ggaatgattt
    21721 taacgttgat attaatatgt tttcctgaca tatttggaac tagctatcta tcgcgaggtt
    21781 atttgattac aatttttatc atattattaa taactatatt gtttgctaat ttttcagaag
    21841 cctttgctga aggtcgtgga aaagcgcaag ctgatagttt aagacaagca caatcaaatt
    21901 taactgctcg attgatagaa gaaaatgatg cgtatcggat agtgaacgcc acagagttaa
    21961 aagccggaca aaatattcgg gtagaaaatg gagaaacaat ccctgctgat ggcgttgtaa
    22021 taaatggatt agcaaccgtt gatgaatctg caattactgg tgagtctgca cctgtgataa
    22081 aagaatcagg tggcgatttt gatggagtca ttggcggtac acttgtaaca tctgattggt
    22141 tagaaatacg tgttgagagt gaagcgggta catctttttt agataaaatg attgccttag
    22201 ttgaaggggc ggaaagaaat aaaacaccaa atgaaattgc actttttaca ttattgacaa
    22261 cgttaacaat tatattttta gtcgttattg taacattata tctaatagca tcttacctgc
    22321 atttaatttt acctattgcg atgctcattg cgttaacagt atgtttaata ccaacgacaa
    22381 tcggtggttt gttatcggcg attggtattg caggcatgga tcgtgttact caattcaatg
    22441 tattagcgaa aagtgggcgt gctgtagaag tatgtggaga tgtcgatgta atgattttag
    22501 acaagacagg cacaatcact tatggcaatc gaatcgctag tgaattttta ccagtgaatc
    22561 aacaaatgtg ggaaaaattg atagtcgctg cttatatgtc atcaatctac gatgatacac
    22621 cagaaggaaa aagtattgtg cgattagcga agcagatgta tataaatgag ctgcctaaag
    22681 acattgatgg cacatataag ccttttacag ctgaaactag aatgagcgga atcattacaa
    22741 atgaaatatc ggtattcaaa ggtgcaccta atagtatgat aaatcttgtc aaacaacaac
    22801 aaggcgatat tcctcttaat attgagtcta tctgtatgga tgtatcgagt aaaggtggca
    22861 caccattaat agtcattgaa aacaacgtca tgcttggcgt gatttattta aaagatgtga
    22921 ttaaagatgg tcttgtagaa cgatttgctg aattgagaaa aatgggcatt gaaacagtta
    22981 tgtgtacggg cgataatgct ttaacagcag ctacaattgc aaaagaagcg ggtgttgata
    23041 gatttgttgc agagtgtaaa cccgaagata aaattaaagt catcaaagat gaacaagcga
    23101 aaggccatat tgttgcgatg acaggagatg gtacaaatga tgcacctgcg ctagcacaag
    23161 cgaatatagg attagctatg aactctggga caattagtgc taaagaggcg gccaatctaa
    23221 ttgatttaga ttcgaatcct acaaagttaa tagaggttgt aaaaataggc aaacaattat
    23281 taatgacgag aggtgcatta acgacattta gtttggctaa tgacgtagca aaatactttg
    23341 caattttacc tgcactaatg atgtcaacga ttccagaaat gacttcacta aatattatgc
    23401 atttatcgtc acctaaatct gcaatcatat cagctttgat attcaatgca ttaatcattg
    23461 ttgccttaat tccaattgcc atgaaaggtg taaaagtaaa gggttacagc attgatagaa
    23521 tttttataaa taatatgttg atttatggat taggtggatt aatcgtcccg tttttaggca
    23581 ttaaattaat agatatgata gtacaatttt ttgtgtgaag aggaaggagt ctgtaccatg
    23641 aatacgataa gaaatagtat ttgtttaacg ataataacta tggtattgtg tggattttta
    23701 ttcccgttag ctatcacgtt aattggtcaa atattttttt atcaacaagc aaatggtagt
    23761 ttaattacgt atgacaatcg tatagttgga tcaaaattga ttggacagca ctggacagat
    23821 acacgatatt ttcacgggag accgagtgca gttggttata atatgaatcc tgaaaaatta
    23881 tataaaaacg gcgtatcatc aggtggaagt aatgaatcga atggaaacac cgaattaata
    23941 gcacgcgtga aacatcatgt taaatttggt aattcaaatg taacaataga tgctgcaaca
    24001 agttctgggt cgggcttaga tccgcatatt acggttgaaa atgcattgaa gcaagcacct
    24061 cgtattgctg atgctcgtca tatatctact tcaagagtga ccgacttgat tcaacatcgt
    24121 atgcagcgtg gtgtgttaac aaatgattat gtgaatgtgc ttgaactaaa tatagctctt
    24181 gataagatga aagattgatt atagatgaaa ggcatcatgt tgataaaatt ataacatggt
    24241 gtctttttag caattcaagc actttctgct taactaaatt tttagatata cctttaggaa
    24301 gaataaatta gcatgaaata ttccatatgc tataattatc aacatataaa aataaaatga
    24361 aatagattat aaatccgtat aattttttat ttggggagag gggtatatgt cagattatac
    24421 taagttgtct aagagtccta agtcagcatt gttgtattac tacattacga atggcttaga
    24481 atttatattg agtgtagctg tgtatgtcat tttttatttt atatggttaa gatttgaatg
    24541 gcctcagtac ttaatttata ttttgttggt tttaggtgct ctgagtacat taaaattatt
    24601 tattaagcct ttatggcaat atcactgccg cttttatcaa attgatcaac taagtgtaca
    24661 atatcgtaca tcatttttaa tatataaaga agaaacgagt cgaattgaac gtttacaata
    24721 cttgtcgatt aaatctaatc caattagtaa agtgcttaat ttgtataaag ttggatttat
    24781 gactgcaggt catactattt atttaccgat gatgtctcat gacgatgtta aaataatcga
    24841 agcgagaact atgtcgaatt tgagaggggt tgaaagtgat gtctgaacct caaaaattac
    24901 atccgatttc atattttaat ggcataatta atgctatcaa acaaaacata gtcgtctttt
    24961 ttatttttgt tatctttcaa ttgaaagatt ttgattatac gaatcccgaa tcatatttat
    25021 ggataggtat tgtatttgta ttctttttaa tatcatacat ttctcaaatt gtcggaatta
    25081 tgaacacgcg atattggatt gaggataatt atttcatttt aacaacaggt atttttaata
    25141 aaaagcgtaa agaattaaat ataaaacgta ttcagtccgt tgatatgaca caaggggtcg
    25201 tcaatcaaat cattggtggt gtggatttac aaatcaaaac gccaagtgat ggaattgtgt
    25261 taagtgttat ttcgaaaaaa caaggtgaat atcttgaacg ctatattgat caattgcaaa
    25321 cagagttgaa gacagaaatg gcgcaaaagt ctagtactga gcagaatggc aaccgtaatc
    25381 atgacattga aggtaatgtg gaagacatcg cagaaggtcg gctagatgaa gtgcagaact
    25441 ctgatagtaa gcttaatcag aaaaataaac gcattcctat atatcaaatg aattttaaag
    25501 aatcgttatt tatggcaatg accagtggcg ccattggggt aacgttagca gctttactac
    25561 cgatttacgg cgctgtaaga gagttgatcc catggtcgaa gctaaatcat gaaattagtc
    25621 aatgggttca aattgtaagt gtttcagtat taatcatcat tttactagta ttaatactgg
    25681 catatattat tggaacgatt ataacgatga taagatttta tggcttttcg gtgatgcttg
    25741 aaaatgagca acttaaaatt gaatatggtc tatttaacaa gaagaaagtg actgtaccaa
    25801 cgaaacgatt gcaagctgtt gttgaacatc agtcatatat acgaagatta tttggctaca
    25861 cagcaataca ttttatcatc acaagtgatt ttgaaaataa aaaaattgaa gatgatgaca
    25921 atgattcagg tagtgtgtcg atattgccgt ttattaaacg agacaaagcc tatcaaatta
    25981 tccagaattt agtacctgat ttatcttatc aacaagttaa tgaaggtatg cctttttcag
    26041 gttttcacag acacttttta atacctagta ttattgtcat agctatggca ggaattggct
    26101 gttatttttg gaatcaatta ttattgttat ttacgattat aacagtagtc attattggtt
    26161 tatttgtgat caaaggatat ctttatgtca aacatgcggg ttttaaaatg acagaagaac
    26221 aaattactat ccagaatttc gagctattga aacgaaatat ttattatttt aaagcgcatc
    26281 acattatagg atttgacact tggcaacata cattacttaa acgcaacaat ttaaataatt
    26341 ttagttttat tgttgctaaa ggtgtgggag cccaatcgat taacttaaaa tacgcaagaa
    26401 gtgaagatgc aaataaattg aaatcatggt atttgagagg tgaaaatgat gagggattat
    26461 aattttatgt caccacatgc taaaaaagtg atgaggttaa gtgctgtgct gttttggata
    26521 ccaatagcgc ttgtactttt aatagcattt aatattttga actggctatt ttgggagata
    26581 ttagataact atatatccat tgttagtagt gtgattataa tattacttgt tgctgttttc
    26641 acgcttgtca tagcgccagt ctatcgatat aagcactgca gatatgcgtt tgaaaaacac
    26701 catttgcgtg tacgaaacga cattttattt ttggatgaaa aggtaatacc atattttcgt
    26761 attcaaaata ttgatatcga tgttggtcct ataatgagac gctatcgatt agcaactttg
    26821 acactttata cagcgggtgg tcaagctgaa attgaattaa tagatagaag tgaagcacgt
    26881 agattgaaac gatggttaaa taacgagaga catttagaaa acaataaaaa tgaggaataa
    26941 tcaatgatac atggaattgg tgtagattta atcgaaatcg atcgaataaa agtgttatat
    27001 agtaagcaac caaaattggt tgagcggatt ttaactaaaa atgaacagca caaattcaac
    27061 aatttcacac atgagcaacg taaaattgaa tttttagctg gcaggtttgc tacaaaagaa
    27121 gcgttcagta aagcattagg cacaggttta ggaaaacatg tagcttttaa cgatatagac
    27181 tgttacaacg acgaatttgg caaaccaaag attgattacg aaggattcat cgtacatgtt
    27241 agtatctcac acactgagca ttatgcgatg agccaagttg ttttagaaaa gtcagcattt
    27301 taaatttgtt atacaatgat aattgagatc tagttttaaa acgtgtggga attacaggag
    27361 gaagtaatat gtcagataaa ttttatagat ctgcgtatat gaatgtagat ttaaacgctg
    27421 ttgcatcaaa tttcaaagta ttcagtacat tgcatccaaa taaaacagtg atggctgtcg
    27481 ttaaagccaa tgcctatgga ctaggtagtg ttaaagtagc acgtcattta atggaaaatg
    27541 gtgccacatt ttttgctgta gcaacgttag atgaagcgat agaacttaga atgcatggga
    27601 ttactgctaa aattttagtc ttaggtgtgt taccaactaa agatattgat aaagcgatac
    27661 aacaccgtgt tgccttaacg gtcccgtcta aacagtggtt gaaagaagca attaaaaaca
    27721 tttctggtga gcaagagaaa aagttatggt tgcatattaa attagataca ggaatgggac
    27781 gtttaggtat taaagacact aaaacgtatc aagaagtgat tgaaatcatt caacaatatg
    27841 agcaacttgt atttgaaggc gtgtttacac actttgcctg cgctgacgaa ccaggagata
    27901 tgacaactga acaatatcaa cgttttaaag atatggtcaa tgaagcaatt aaacctgaat
    27961 atatacattg tcagaactca gcaggttctc tattaatgga ttgtcaattc tgtaatgcaa
    28021 taagaccagg aatttccctt tatggatatt atccatcaga gtatgtacag caaaaagtta
    28081 aagtacacct taaaccaagt gtgcaattaa ttgctaatgt agttcaaaca aagacgctac
    28141 aagctggtga gtctgtaagt tatggtgcaa cttatacagc tactgatcca acaacaatag
    28201 cattgttacc tattgggtat gcagatgggt atttacgcat tatgcaaggt agctttgtaa
    28261 atgtaaatgg tcatcaatgc gaagttattg gtcgcgtatg tatggatcag acaattgtaa
    28321 aagtgccaga tcaagttaaa gctggagatt cggtgatttt aatagataat catagagaaa
    28381 gtccacagtc ggtagaggtg gcagctgaaa agcaacatac tattaattat gaagtgcttt
    28441 gtaacttgtc gagacgtttg ccgcgaatct atcatgatgg tgatcaacgt tttgtaacaa
    28501 atgaattgtt aaaataatat ggtcagtgca tataaaattt gttatcatta gaataattaa
    28561 aggtcattta ataacttttg gaatcaattg gaggttctca tatgttatct tttagtcaaa
    28621 atagaagtca tagcttagaa caatctttaa aagaaggata ttcacaaatg gctgatttaa
    28681 atctctccct agcgaacgaa gcttttccga tagagtgtga agcatgcgat tgcaacgaaa
    28741 catatttatc ttctaattca acgaatgaat gattagacga ggagatgttt atttagcaga
    28801 tttatcacca gtacagggat ctgaacaagg gggagtcaga cctgtagtca taattcaaaa
    28861 tgatactggt aataaatata gtcctacagt tattgttgcg gcaataactg gtaggattaa
    28921 taaagcgaaa ataccgacac atgtagagat tgaaaagaaa aagtataaat tggataaaga
    28981 ctcagttata ttattagaac aaattcgtac acttgataaa aaacgattga aagaaaaact
    29041 gacgtactta tccgatgata aaatgaaaga agtagataat gcactaatga ttagtttagg
    29101 gctgaatgca gtagctcatc agaaaaatta ggcgtctatt atatgtattt ttcagagata
    29161 aataaaatat tgatataaaa gacaataact ttataataat tataactatt tctaaattct
    29221 gtgcgaagaa ttttcttata aacaaagatt ttagcaaata ccagttatga tattcatatt
    29281 ttttattata aaaggatgtc ttaagttttt taggctttag gtattccatc ctaaagtttt
    29341 tttagcttaa aagtatcatc tacagcaaaa ttgcaaacga caaaatggat aagtgcaatt
    29401 aaataaatgt tagtaagtga atcataatta tccttgctta agcatttgct ttgtaaggga
    29461 agtgaggagg caactaatcg tggaagaatt taagcaacat tataagggtt taattgatga
    29521 aagtttaacg tgccaagata aagtagaatt gataaaaaag tgtgagaaat acactgacga
    29581 agtgattcgt aaggacgtct tgcctgaaga cattgtcgat attcacaaaa actatatatt
    29641 gacgttaaac ttaacgcgtg aagatgtgtt caagacatta gatgtcttac aagaaatcgt
    29701 taaaggcttt ggttatagtt atcgagatta tcaaagattg gtagataaac ttcaagttca
    29761 cgataaagag atagacttag cttctagctt acaacaaaca atgcttaaaa cagatattcc
    29821 acaatttgat agtattcaaa ttggcgttat ttcagtggcg gcacaaaaag taagtggaga
    29881 ttattttaat ttaattgacc ataacgatgg cacaatgagc tttgctgttg cagatgtcat
    29941 tggaaaaggt ataccagctg ctttagcaat gagtatgata aagtttggca tggattctta
    30001 tggacactca caattaccga gtgatggctt aaaacgttta aatcgtgttg ttgaaaagaa
    30061 tattaatcaa aatatgttcg tcacaatgtt ttatggttta tatgaagaaa tgaaccattt
    30121 attgtattgt agttcagctg gtcatgagcc tggatatatt tatcgcgctg aaaaagaaga
    30181 atttgaagaa atttcagtta gaggtagagt gttaggaatc agttcacaaa cacgatatca
    30241 acaacaagaa attccaatat accttgatga tttaattatc attttaacgg atggtgtgac
    30301 tgaagctaga aatagtgaag gtacctttat agataaacaa aaacttttag aatatattaa
    30361 aaaacataaa catatgcacc cacaagatat tgttcaaatt atctatgaag caattttaaa
    30421 gcttcaaaac ccaaataaaa aagatgatat gactattttg attataaaaa gagtaaatta
    30481 atttaaaaaa gaagattaga aattatttcg atgggtatat aataatttga aatataaata
    30541 tggtggatac agcgcttaaa atgaagataa atatttttaa taagtaggag tgtaatgaaa
    30601 tgaatcttaa tatagaaaca accactcaag ataaatttta cgaagttaaa gtcggtggag
    30661 aattagatgt ttatactgtg cctgaattag aagaggtttt aacacctatg agacaagatg
    30721 gaactcgtga tatttatgtt aatttagaaa atgtgagtta tatggattcg acaggtttag
    30781 gtttattcgt aggtacatta aaagcattaa accaaaatga taaagaacta tacattttag
    30841 gtgtgtcaga tcgtatcggt agactatttg aaattactgg tcttaaggat ttaatgcatg
    30901 ttaatgaagg aacggaggtc gaataacatg caatctaaag aagattttat cgaaatgcgc
    30961 gtgccagcat cggcagagta tgtaagttta attcgtttaa cactttctgg cgttttttcg
    31021 agagctggtg ctacatatga tgatattgaa gatgccaaga ttgcagttag tgaagctgtg
    31081 acaaatgcag ttaaacatgc atacaaagaa aaaaacaatg tgggcattat taacatatat
    31141 tttgaaattt tagaagataa aattaaaatt gttatttctg ataaaggtga cagctttgat
    31201 tatgaaacaa ctaaatcaaa aataggtcct tacgataaag acgaaaatat agacttttta
    31261 cgcgaaggtg gcctaggttt atttttaatc gaatctttaa tggatgaagt gacagtatat
    31321 aaagaatctg gtgtgacaat cagtatgact aagtatataa aaaaagagca ggtgcgaaat
    31381 aatggcgaaa gagtcgaaat cagctaatga agtttcacct gagcaaatta accaatggat
    31441 taaagaacac caagaaaata agaatacaga tgcacaagat aagttagtta aacattacca
    31501 aaaactaatt gagtcattgg catataaata ttctaaagga caatcacatc acgaagattt
    31561 agttcaagtt ggtatggttg gtttaatagg tgccataaat agattcgata tgtcctttga
    31621 acggaagttt gaagcctttt tagtacctac tgtaatcggt gaaatcaaaa gatatctacg
    31681 agataaaact tggagtgtac atgttccgag acgtattaaa gaaattgggc caagaatcaa
    31741 aaaagtgagc gatgaactaa ccgctgaatt agagcgttca ccttctatca gtgaaatagc
    31801 tgatcgatta gaagtttcag aagaagaagt gttagaagca atggaaatgg gacaaagtta
    31861 taatgcgtta agtgttgatc attccattga agctgataaa gatggttcaa ctgttacgct
    31921 attagatatt atggggcaac aagatgacca ttatgactta actgaaaaac gtatgatttt
    31981 agaaaaaata ttacctatat tatctgatcg agaacgagaa atcatacaat gtacgtttat
    32041 tgaaggtttg agtcaaaaag agacaggtga gcgtattggt ttgagtcaaa tgcatgtatc
    32101 acgacttcag agaacggcaa ttaagaaatt acaagaagca gcacataaat aaaatttgct
    32161 tattaatgat gcgttttata atgaaaaatc catataatta tcccttgatt attaaattga
    32221 aatcgagggg tatttttaat ttaattaaga ttttcgaatt aatacattaa taatgtagtt
    32281 taatgtgtat ccacataaat gttgcgatat agtattaata atttaagtga agaagatatc
    32341 taattgtcgg tttaattaag tggattgcta ttagaataaa aaaagtaggc ttagattatg
    32401 aaatttagga aatgatggtg tgtcattttc aataatctta gtgcgtttta aaatatagta
    32461 tgacctaata attcgttttt aatgttttgg aagtgaaaat tgcattaagt atcatacctt
    32521 aatagaagta ttttagaata tgttaaaata aatgagtaaa tttaagaaaa agtgtgggtt
    32581 aagtaaatgg acaatcaatt gattaattca atcatagaga aatatcaatt tagtaaaaaa
    32641 caaattgaag cagtgttaac actgcttgaa gaaaaaaata cagtaccatt tattgcgagg
    32701 tatcgaaaag agcaaactgg tggactagat gaagttcaaa taaagcaaat tgatgacgaa
    32761 taccaatata tggtcaattt acaaaaacgt aaagaagaag ttatcaaaaa tatagaacag
    32821 caaggattac ttactgagga attaaagaaa gatattttaa aacagaacaa attacaacgt
    32881 gttgaagacc tatatagacc ttttaaacaa aagaaaaaga ctagggcaac tgaggcgaaa
    32941 cgtaaaggat tagaaccatt agcgatatgg atgaaggcac gtaaacatga agtctcaatt
    33001 gaagaaaaag cacaacaatt tataaatgaa gaagtgcaat cggttgaaga tgctatcaaa
    33061 ggtgcgcaag atattattgc ggaacaaatt tcagataatc ctaaatatag aacaaaaatt
    33121 ttaaaagata tgtatcatca aggtgtgtta actacatcta aaaagaaaaa tgctgaagat
    33181 gaaaaaggta tttttgaaat gtactatgca tacagtgagc caattaaacg cattgctaat
    33241 catagagttt tagctgtgaa tcgtggtgaa aaagagaaag tattatctgt aaagtttgaa
    33301 ttcgatacga catcagtaga ggatttcatt gcacgtcaag aaatcaatca taataatgta
    33361 aatcgctgtt atattttaga ggcgattaaa gatagcttga aacgcttaat tgtcccttcg
    33421 atagagcgtg aaatccatgc tgatttaact gaaaaagctg aaaatcatgc aatagatgtt
    33481 tttagtgaaa acttaagaaa tctattactg caacctccaa tgaaaggtaa acaaatatta
    33541 ggcgtagatc cagcatttag aacaggttgt aaattagcag tcattaatcc attcggtact
    33601 tttatagcaa aaggtgtgat ttatccgcat ccaccagttg ctaaaaaaga agcagcagag
    33661 aaggattttg tacaaatggt taaagcgtat gatgtgcaat taattgcaat tggcaatggt
    33721 acagcaagtc gtgaaacaga acaatttgtt gcagatttaa ttaaaaagca tcagttgcca
    33781 gtacaattca tcattgtcaa tgaagcgggc gcctcagtat actcagcatc agaaattgct
    33841 agagatgaat ttcctgattt tcaagtggaa gaaagaagtg ccgtatcaat tggacgacgc
    33901 gttcaagatc cattaagtga attagttaaa atcgatccta aatctattgg tgtcggacaa
    33961 taccagcatg atgttaatca aaaagcacta gaaaatgcat taactttcgt tgttgaaaca
    34021 gcagttaacc aagtaggtgt tgatgtcaat acagcatcat catcattatt acaatatgtg
    34081 tctggtctaa gttcgcaaat tgctaaaaat ataattgcat atagagaaga aaatggcgca
    34141 ataaagcata ataaagaatt aagcaagatt aagcgtttgg gtgctaaaac ttttgagcag
    34201 agtataggat ttttaagaat agtagacggg tcagagccgt tggataatac atcgattcat
    34261 cccgaaagct ataaagtaac gtatcagtta ttagataaac tcggatttgg tggcaatgat
    34321 ttaggtagtg atgcattaaa agctaaatta aattcattgg atatggatga actggcgatt
    34381 gaattacaag tcggtgtacc tacattagag gatattatta aatccttgaa agcacctaat
    34441 cgagatccaa gggatgagtt tgaaacacca atacttaaat ccgatgtgct atcaattgaa
    34501 gatttaaaag aaggaatgaa attgagtggc acagttagaa atgtagtaga ttttggagca
    34561 tttgtagata taggtgttaa acaagatgga cttgtccatg tttcgaaact ttctaagaag
    34621 ttcgtaaaaa atccaatgga tattgtcagt gtcggtgata tcgttgacgt ttggatttac
    34681 agtattgaca aaaataaaga caaagtatca ttaacgatga ttgatccaca tgaataatga
    34741 caaacttcag cgaatggttg agaacctttc ggaagaaaaa tttggacgta catttcgaca
    34801 ttgtgcatat tttaataaaa ggttacgtac aacaggcgga cgttatcttt taaagtccca
    34861 tgatattgaa attaatccaa aacaatatga gcattatgga gaagatgcta ttgtaaaaat
    34921 tatactgcat gaattatgtc attatcactt gcatattgct ggtaaaggtt atcaacataa
    34981 agatcaagat tttaaacgat tgagtcaaca ggttggagcg cctagatttt gtaacagcat
    35041 tgaaagctat caacaacggg cgaattatga atattattgc actaaatgtc atgcaaaata
    35101 tatacgtatc cgtaaagttg atacgaatcg tatgcgttgc ggacattgta atggaaaatt
    35161 aagaatgaaa agacaattga aataagtaca atacaaatag agctaattcg agtatatgta
    35221 agattattta tgagttgtat ggaatttata tagaatttat cagtgagtta ttttgattgg
    35281 taaacatagt aattgaataa gaagaaattg tgtttataaa atgtttaaag ccgagattgt
    35341 cgtaatttaa tacttcacaa tcgcggcttt tctacttttg atataggtaa tggcataaat
    35401 tgtgacttga taggatgaaa ttcaattgat tagattaaaa atcttggcgt attttagtaa
    35461 tgaataatat ataaacttta cccaattaaa gctttaaagt agcacaaaag ataattatac
    35521 atttttaatg acattttgat tgaatttatc tattgactgt acagcttata gttagtatga
    35581 ttaaacacgt tccttaaaaa agaacaaatt aaataaactt tgatttgaaa gacagtcaat
    35641 tctaaattta atttataaaa tatgttgaca ataagttctt aatgttttat tataaataac
    35701 gttgtgttaa caactgataa cacaaattaa tttaatgtaa aaaaacgatt aaaagtt
//
LOCUS       DALMNS010000012        35252 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.012, whole genome shotgun sequence.
ACCESSION   DALMNS010000012 DALMNS010000000
VERSION     DALMNS010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 35252)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35252)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35252
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.012"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..403)
                     /locus_tag="O6Y56_000490"
     CDS             complement(<1..403)
                     /locus_tag="O6Y56_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001005261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573783.1"
                     /translation="MNEQIIGSIYTLAGGVVLYSVKEIFRYFTDSNLQRKKINLEQIY
                     PIYLDCFKKAKKMIGAYIIPTEQHEFLDFFDIEVFNNLDKQSKKAYENVIGFRQMINL
                     SNRVKAMEDFKMSFNNEFSTNQIFFNPSFVME"
     gene            complement(562..711)
                     /locus_tag="O6Y56_000491"
     CDS             complement(562..711)
                     /locus_tag="O6Y56_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDB5573784.1"
                     /translation="MIKQILRLLFLLAMYELGKYVTEQVYIMMTANDDVEASSDYVFR
                     AEVSE"
     gene            complement(708..914)
                     /locus_tag="O6Y56_000492"
     CDS             complement(708..914)
                     /locus_tag="O6Y56_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1381 domain-containing protein"
                     /protein_id="HDB5573785.1"
                     /translation="MTQYLVTTFKDSTGRKHTHITKAKSNQRFTVVEAESKEEAKERY
                     EAQVKRGAVIKVGQLFENIRECGK"
     gene            complement(951..1484)
                     /locus_tag="O6Y56_000493"
     CDS             complement(951..1484)
                     /locus_tag="O6Y56_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HDB5573786.1"
                     /translation="MNNLTVDQLQELLQIQKEFDDRIPTLNLRDSKIAYVVEFFEWFN
                     TLETFKNWKKKPGKPLDVQLDELADMLAFGLSIANQVGVSSEEIKEAIESSFKDTEFH
                     KMFNFKDKEFAQDAVVSTPQIIFKEFYPDQQAIVIVIDIAYNLYSIDQLIDAYKKKMK
                     RNHERQDGTADAGKGYV"
     gene            complement(1499..1660)
                     /locus_tag="O6Y56_000494"
     CDS             complement(1499..1660)
                     /locus_tag="O6Y56_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000889682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573787.1"
                     /translation="MLEIIDQRDALLEEKYLNDDWWYELDYWLNKRKSENEQIDIDRV
                     LKFIEELKR"
     gene            complement(1661..1918)
                     /locus_tag="O6Y56_000495"
                     /pseudo
     CDS             complement(1661..1918)
                     /locus_tag="O6Y56_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000248921.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1944..2117)
                     /locus_tag="O6Y56_000496"
     CDS             complement(1944..2117)
                     /locus_tag="O6Y56_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000028426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573788.1"
                     /translation="MSISVGDKVYNHETNESLEIVQLVGDIRDTHYKLSDDSVISIID
                     FITKPIYLIKGDE"
     gene            complement(2107..2358)
                     /locus_tag="O6Y56_000497"
     CDS             complement(2107..2358)
                     /locus_tag="O6Y56_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016170782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1024 family protein"
                     /protein_id="HDB5573789.1"
                     /translation="MNNREQIEQSIISASAYNGNDTEGLLKEVEDVYKKAQAFDEILE
                     GLPNAMQDALKEDIGLDEAVGIMTGQVVYKYEEEQENEY"
     gene            complement(2373..2615)
                     /locus_tag="O6Y56_000498"
     CDS             complement(2373..2615)
                     /locus_tag="O6Y56_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phi PVL orf 51-like protein"
                     /protein_id="HDB5573790.1"
                     /translation="MTDNARKEYLNQFFGSKRYLYQDNERVAHIHVVNGTYYFHGHIV
                     PGWQGVKKTFDTAEELETYIKQHGLEYEEQKQLTLF"
     gene            complement(2619..2987)
                     /locus_tag="O6Y56_000499"
     CDS             complement(2619..2987)
                     /locus_tag="O6Y56_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001607407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573791.1"
                     /translation="MARKARIVTINDKPYRFSKFEMELIESHGITAGMVSKRVKDGWE
                     LHEAMDAPEGTRLSEYREKKTIERLEQARLERKLERKRKREAELRRKKPHLFNVPQKH
                     PRGRYACYLMENDIFVKVKK"
     gene            complement(3000..3404)
                     /locus_tag="O6Y56_000500"
     CDS             complement(3000..3404)
                     /locus_tag="O6Y56_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000401967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HDB5573792.1"
                     /translation="MEIEIKFNEVFNAPMGSPRPRFRKTGRFVQTYMPTSYTKHKAYI
                     QGQMPKLNLERALKIELDFYFPLLKSWSKKKKIEMVGQYKVTKQDIDNLIKTVLDACN
                     GHVWKDDNQITEITSSKRYGIEPKIIIRIEEI"
     gene            complement(3413..3631)
                     /locus_tag="O6Y56_000501"
     CDS             complement(3413..3631)
                     /locus_tag="O6Y56_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000338527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573793.1"
                     /translation="MDAFDKYYLFDHDGNKMFSVTPHFKDGRHLVVGIKETKFNGRRW
                     YLDDYELNTLIDNEQMELGHQTSLFEYI"
     gene            complement(3638..4522)
                     /locus_tag="O6Y56_000502"
     CDS             complement(3638..4522)
                     /locus_tag="O6Y56_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain protein"
                     /protein_id="HDB5573794.1"
                     /translation="MTGWIKLHRKLLDSPIFQNEKLFKVFAYCLMKASHKDHTQLVGR
                     RVVELEKGQFVFGRKRASEELRLKESTVRDYIKLLENLGTIVVKSDNKFSVITVVNWA
                     IYQSMEENSDSKNDNKSTTNGQQINNKSTTNGQQINTNKNVKNGDNVKNDENEKKKVT
                     AFDFFQDNGFGFITPYNLDDLNYYLDSFENDSDEIVTASLKIAKDRNKVTWGYAKSIL
                     NTWLNANLKSIEQVRAFEKQQLESKKQTNKPYVKPSKEKTPKWLTDSTRETKTPEVDE
                     NLEKDREAFIKRLNSKWE"
     gene            complement(4552..5022)
                     /gene="ssb"
                     /locus_tag="O6Y56_000503"
     CDS             complement(4552..5022)
                     /gene="ssb"
                     /locus_tag="O6Y56_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDB5573795.1"
                     /translation="MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGER
                     EADFINVIVFKKQAENVNKYLSKGSLAGVDGRLQTRNYENKEGQRVYVTEVVADSIQF
                     LEPKNTNDNQQDLYKQQAQQSRGQSQYPYNKPVKDNPFANANDPIEIDDDDLPF"
     gene            complement(5023..5631)
                     /locus_tag="O6Y56_000504"
     CDS             complement(5023..5631)
                     /locus_tag="O6Y56_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001169067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDB5573796.1"
                     /translation="MKFERVQKHFKYKTRHIAGCLITHEHGDHAKYTKQFVDNGVISY
                     MTAGTQQAMNFESHRSCTIKAKQELRIGTWSILPFDIEHDANEPVAFLLQSTLGYKVL
                     YVTDTKYLKYKFNGITHMMLEVNYIYEQMQENIKNGSVHSALANRIMESHFSLEHAIG
                     MLKANDLTRLEEIHLSSQNSNAKYIKSEIQKVTGVPVYVGGL"
     gene            complement(5712..6632)
                     /locus_tag="O6Y56_000505"
     CDS             complement(5712..6632)
                     /locus_tag="O6Y56_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000138475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HDB5573797.1"
                     /translation="MTENNKLQTIEQQLVQEKNVSDNVLNKVRVLESQGNLELPNDYS
                     PSNAMKQAWLQISQDNKLMSCNDTSKANALLDMVTQGLNPAKNQCYFIPYGNKMQLQR
                     SYHGNVMMLKRDAGAQDVVAQVIYKGDTFKQEMGETGRIKAIKHEQDFFNIDKENIIG
                     AYCTIVFNDGRDNYIEVMTIEQIKQAWMQSSMIKDEKALQNSKTHNNFKEEMAKKTVI
                     NRAAKRYINTSTDSNLFKYAQESEQRQRKEVLDAEVEENANQEQLDFEQPVLEEAQYT
                     ELENDKPIDVSDFEEIKKPATEKESEEEPF"
     gene            complement(6634..8577)
                     /locus_tag="O6Y56_000506"
     CDS             complement(6634..8577)
                     /locus_tag="O6Y56_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000700558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDB5573798.1"
                     /translation="MKINKLTISNFAGIKEEKFNFDGKDAKIYGNNATGKTTTATALQ
                     WLLFDKGLDGSTKSFNPVPLNEKNEENYELIPTVFAEFEIDGKITTFKKESHPKYTIN
                     QKTNRKEYSRSRTKKQYINDESIKVKDYKARIDELIDEDVFKLITNPQAFNLLDWKKR
                     RSLLFEIAKPINDEDVIKTNDDFKELNNILGDHEIETKKKILTDKIKQINKDIKDIPI
                     RINQTQQNKQDVPEFDNDRYAIIKQEIEQLENERIDIQNGKEEINLRNQLADKQSELK
                     RIEDNNSASNENKIHALTNELHVENGTVANLKTRLKQNKQQITHEENRRNQLLENHKG
                     LKSDLEKAKNQKFEYLDDNVCSCCGQQLPAEQVNEAREKALQKFNASKSKELETIQTS
                     INHIISEGKKIKPIIEKLEDDNNNLQIKINEAEERSARIQNKINKLKTTHVDVTQTDE
                     YKAVMLEINEINQKRSNIRKTIQDKVSGIDDKISELTQEKSEIEVSRSIEKSNKHLDD
                     VISELRNEEDRLLDEKEKYSHDLYILKEFTTTKVKMLTENINNEFDIAEFKLFNTLVN
                     GELEETCSTTVNGVEYDSGLNNASRINVGLDIINTLSKHFKVTAPIFIDNAESVTELI
                     KTESQQIQLIVNEQDKKLRMETI"
     gene            complement(8586..8849)
                     /locus_tag="O6Y56_000507"
     CDS             complement(8586..8849)
                     /locus_tag="O6Y56_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001638663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573799.1"
                     /translation="MRDTERNILNIFKTLFDEYTLSNQRALLEIERNHHGYLSINFLH
                     YHDSYKTNNKLVQIHEINPDSHERIKNLIIEVLRGHRKIKKGA"
     gene            complement(8858..9118)
                     /locus_tag="O6Y56_000508"
     CDS             complement(8858..9118)
                     /locus_tag="O6Y56_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1108 family protein"
                     /protein_id="HDB5573800.1"
                     /translation="MYYKIGDVCQKVINVDGFDFKLAVKKQDYSILVNVLDLEDRFID
                     SINITDENDLYTALDILNQSIYEWIEENTDERDRLINLVMRW"
     gene            complement(9211..9372)
                     /locus_tag="O6Y56_000509"
     CDS             complement(9211..9372)
                     /locus_tag="O6Y56_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1270 domain-containing protein"
                     /protein_id="HDB5573801.1"
                     /translation="MSNIYKSYLVAVLCFTVLAIVLMPFLYFTTAWSIAGFASIATFI
                     FYKEYFYEE"
     gene            complement(9369..9689)
                     /locus_tag="O6Y56_000510"
     CDS             complement(9369..9689)
                     /locus_tag="O6Y56_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF771 domain-containing protein"
                     /protein_id="HDB5573802.1"
                     /translation="MPHILNVTVPIPETHVLITKDEYDELIGYSLDPVWNMSDLKKKL
                     KIASDETIKDRLLFHPRFEKELRAQGIVHYPDENFNRWRFNARKMNKFVDEHFNEIYK
                     ERIK"
     gene            9748..10380
                     /locus_tag="O6Y56_000511"
     CDS             9748..10380
                     /locus_tag="O6Y56_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573803.1"
                     /translation="MYIDPLKNVRFSINNVISNVEISKSMAIKQSLKPKYQLDIINRN
                     NINLFSDFKVDFHLNNLIEMNFNLRNSFSSLTFQRNLFSEETIKSFKELYRFDDEIVL
                     QAQQTIRDFYINPTAISTLAEAINSTYPINEQSTYKRHDEFVKRIENDFPHPFKKLIR
                     WSNGIAAGADIQIFVTNYINENDLHIQNSLIVAIVCLLSFLSTYCSHSKK"
     gene            complement(10395..10535)
                     /locus_tag="O6Y56_000512"
     CDS             complement(10395..10535)
                     /locus_tag="O6Y56_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573804.1"
                     /translation="MLQKFRIAKEKNKLKLKLLKHASYCLERSNNPELLRAVAELLKK
                     VN"
     gene            complement(10566..10760)
                     /locus_tag="O6Y56_000513"
     CDS             complement(10566..10760)
                     /locus_tag="O6Y56_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000388066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573805.1"
                     /translation="MEAQNKKVIYYYYDEANNRRLLSIGNLDTYLLADIKSRFGLYKK
                     AIPDLDNLYIQIDGIEFKLY"
     gene            complement(10777..11529)
                     /locus_tag="O6Y56_000514"
     CDS             complement(10777..11529)
                     /locus_tag="O6Y56_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001148641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /protein_id="HDB5573806.1"
                     /translation="MQALQTKSNIGEMFNIQEKENGEIAISGRELHQALEVKTPYKKW
                     FERMSDYGFEENIDYVVTDIFVHNPLGGRQNQTDHALTLDTAKEIAMIQRSEPGKRAR
                     QYFIQVEKAWNSPEMIMQRALKIANNTINQLETKIERDKPKIVFADAVATTKTSILVG
                     ELAKIIKQNGVNIGQRRLFEWLRQNGFLIKRKGVDYNMPTQYSMERELFEIKETSITH
                     SDGHTSISKTPKVTGKGQQYFVNKFLGEKQTT"
     gene            11586..12125
                     /locus_tag="O6Y56_000515"
     CDS             11586..12125
                     /locus_tag="O6Y56_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573807.1"
                     /translation="MDIIAICIAIFSFLLTALKYYLDYMKDSLNIDVIPTRSFNYLVD
                     DKSSYNDITFINFTKFPISVIDVEFDIKNKVNEQKTFKPIRYKDKNYSIPFTLGPYES
                     VECTFLLEEYPVIWEWDVTIKVTTNKGIYIKPVIIESRTEHRESEPQVTELTSANKVS
                     ALSNPKDGFLKKFLYHLKP"
     gene            complement(12149..12409)
                     /locus_tag="O6Y56_000516"
     CDS             complement(12149..12409)
                     /locus_tag="O6Y56_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDB5573808.1"
                     /translation="MEQITLTKEECVEQCINKDLKLLDYRVQQILEGVLSESTTYGDA
                     RNKLETLKIIAESHFKTEHASVIYKLALKKLDEKINATPIKE"
     gene            complement(12422..12661)
                     /locus_tag="O6Y56_000517"
     CDS             complement(12422..12661)
                     /locus_tag="O6Y56_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000548577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDB5573809.1"
                     /translation="MHKDLYSSRKAAKKNQDFMGSLIGVSGQQYGKRERGEIPINLDE
                     AMIFSKALETPIQELFPEYFFIERVPKMHKNEITS"
     gene            12832..13539
                     /locus_tag="O6Y56_000518"
     CDS             12832..13539
                     /locus_tag="O6Y56_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000094095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDB5573810.1"
                     /translation="MSSFSSNLERLMNKRDMSDSELAELVDVNRTTVTRWRKGIRSPK
                     LDKLPEIANVFGVKPLDLIHDMDDSKIIEEIHNVSSQLTPPRQSNVLKYATNQLEEQN
                     NDSDNLVDFNSYIQEKSEVDIYGCASAGIGERLYNEPISKEFIRGYVPAHDIALKVNG
                     DSMEPLFKNGQIIFIEKSHTIKDGQIGVFIINGDAYVKKVYVEDNRLTLVSLNKKYKD
                     LHFYDNESVRLVGKVIL"
     gene            13551..13706
                     /locus_tag="O6Y56_000519"
     CDS             13551..13706
                     /locus_tag="O6Y56_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001049399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573811.1"
                     /translation="MNLKEVDINIEEWEMVEIPFYTEEELTYRLKNDLPITKSEFEEQ
                     ESKNEFL"
     gene            13693..13878
                     /locus_tag="O6Y56_000520"
     CDS             13693..13878
                     /locus_tag="O6Y56_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573812.1"
                     /translation="MNSYKEIEHLHINTGGKELTQEQIEEAKSFIDSQGFKDMIREAK
                     ESRQRVMESKITDRTKM"
     gene            14078..14245
                     /locus_tag="O6Y56_000521"
     CDS             14078..14245
                     /locus_tag="O6Y56_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573813.1"
                     /translation="MKITNCKIKKETIVYEVLTSGNQPFTYELPKDLSSHNARKYLEF
                     ISQKIDGDKLN"
     gene            14385..14924
                     /locus_tag="O6Y56_000522"
     CDS             14385..14924
                     /locus_tag="O6Y56_000522"
                     /inference="COORDINATES: protein motif:HMM:NF014505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HDB5573814.1"
                     /translation="MEEKRYKVYQRGEIIYADFGKGVGHEFSYKHFCIVINKKDNKNN
                     GKVTVIPLTSKSKHNAFVNIHLIKPFLNTLKQSIAKHEKKIESIENIINQNPNDLKVI
                     VYARFLCDSLKNEMKQYDFVENKLKNLVDKSSYAKTQDITTISKDRILNYIKDLSVLI
                     RLPKHETDRLVNICFKKMS"
     gene            15097..16134
                     /locus_tag="O6Y56_000523"
     CDS             15097..16134
                     /locus_tag="O6Y56_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDB5573815.1"
                     /translation="MKTRCYDGKKWQYEFKHEGKRYRKKGFRTKREANSAGLDKLNEL
                     RSGFNIDNYITLEEYFENWIKTYKQPVVKENTYRHYRNALQHIQKHKIGKMELSKINR
                     QVYQKFINDYSKEHAKETIRKTNGAIRSALDDALYDGLIFKNPAYKVNYKAGKPTKSE
                     QEKFISVTEYEILKDHVRKKRTRSSLALFIMICTGCRVSGARNIKIEHINQVKNTIFI
                     DERKTDTSPRYISIAKSDMKHIMDVISTFAISYDGYIFKEAGSIINLQAINNALKSAC
                     RVNNIPIITSHALRHTHCSYLLAKGVSIHYISKRLGHKNIAITTSVYSHLLEEKFNEE
                     DKKTTKILESM"
     gene            complement(16208..29653)
                     /gene="ebh"
                     /locus_tag="O6Y56_000524"
                     /pseudo
     CDS             complement(16208..29653)
                     /gene="ebh"
                     /locus_tag="O6Y56_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499969.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hyperosmolarity resistance protein Ebh"
     gene            complement(30051..31442)
                     /gene="norB"
                     /locus_tag="O6Y56_000525"
     CDS             complement(30051..31442)
                     /gene="norB"
                     /locus_tag="O6Y56_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000414682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter NorB"
                     /protein_id="HDB5573816.1"
                     /translation="MEKPSREAFEGNNKLLIGIVLSVITFWLFAQSLVNVVPILEDSF
                     NTDIGTVNIAVSITALFSGMFVVGAGGLADKYGRIKLTNIGIILNILGSLLIIISNIP
                     LLLIIGRLIQGLSAACIMPATLSIIKSYYIGKDRQRALSYWSIGSWGGSGVCSFFGGA
                     VATLLGWRWIFILSIIISLIALFLIKGTPETKSKSISLNKFDIKGLVLLVIMLLSLNI
                     LITKGSELGVTSLLFITLLAIAIGSFSLFIVLEKRATNPLIDFKLFKNKAYTGATASN
                     FLLNGVAGTLIVANTFVQRGLGYSSLQAGSLSITYLVMVLIMIRVGEKLLQTLGCKKP
                     MLIGTGVLIVGECLISLTFLPEILYVICCIIGYLFFGLGLGIYATPSTDTAIANAPLE
                     KVGVAAGIYKMASALGGAFGVALSGAVYAIVSNMTNIYTGAMIALWLNAGMAILSFVI
                     ILLLVPKQNDTQL"
     gene            complement(31598..32920)
                     /locus_tag="O6Y56_000526"
     CDS             complement(31598..32920)
                     /locus_tag="O6Y56_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDB5573817.1"
                     /translation="MSNGKELQKNIGFFSAFAIVMGTVIGSGVFFKISNVTEVTGTAG
                     MALFVWFLGGIITICAGLTAAELAAAIPETGGLTKYIEYTYGDFWGFLSGWAQSFIYF
                     PANVAALSIVFATQLINLFHLSIGSLIPIAIASALSIVLINFLGSKAGGILQSVTLVI
                     KLIPIIVIVIFGIFQSGDITFSLIPTTGNSGNGFFTAIGSGLLATMFAYDGWIHVGNV
                     AGELKNPKRDLPLAISVGIGCIMAVYLLINATFLLTLPIELLAGNLNAASDTSKILFG
                     ENGGKIITIGILISVYGTINGYTMTGMRVPYAMAERKLLPFSHLFAKLTKSGAPWFGA
                     IIQLIIAIIMMSMGAFDTITNMLIFVIWLFYCMSFVAVIILRKREPNMERPYKVPLYP
                     IIPLIAILAGSFVLINTLFTQFILAIIGILITALGIPVYYYKKKQKAA"
     gene            complement(32951..33991)
                     /gene="tdcB"
                     /locus_tag="O6Y56_000527"
     CDS             complement(32951..33991)
                     /gene="tdcB"
                     /locus_tag="O6Y56_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional threonine ammonia-lyase/L-serine
                     ammonia-lyase TdcB"
                     /protein_id="HDB5573818.1"
                     /translation="MTTNTVTLQTAHIVSLGDIEEAKASIKPFIRRTPLIKSMYLSQS
                     ITKGNVFLKLENMQFTGSFKFRGASNKINHLTDEQKEKGIIAASAGNHAQGVALTAKL
                     LGIDATIVMPETAPQAKQQATKGYGAKVILKGKNFNETRLYMEELAKENGMTIVHPYD
                     DKFVMAGQGTIGLEILDDIWNVNTVIVPVGGGGLIAGIATALKSFNPSIHIIGVQSEN
                     VHGMAESFYKRDLTEHRVDSTIADGCDVKVPGEQTYEVVKHLVDEFILVTEEEIEHAM
                     KDLMQRAKIITEGAGALPTAAILSGKINNKWLEDKNVVALVSGGNVDLTRVSGVIEHG
                     LNIADTSKGVVG"
     gene            complement(34086..35204)
                     /gene="ald"
                     /locus_tag="O6Y56_000528"
     CDS             complement(34086..35204)
                     /gene="ald"
                     /locus_tag="O6Y56_000528"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HDB5573819.1"
                     /translation="MLVAVVKELKQGEGRVACTPENVRKLTDAGHKVIVEKNAGIGSG
                     FSNDMYEKEGAKIVTHEQAWEADLVIKVKEPHESEYQYFKKNQIIWGFLHLASSKEIV
                     EKMQEVGVTAISGETIIKNGKAELLAPMSAIAGQRSAIMGAYYSEAQHGGQGTLVTGV
                     HENVDIPGSTYVIFGGGVAATNAANVALGLNAKVIIIELNDDRIKCLEDMYAEKDVTV
                     VKSTPENLAEQIKKADVFISTILIPGAKPPKLVTREMVKSMKKGSVLIDIAIDQGGTI
                     ETIRPTTISDPVYEEEGVIHYGVPNQPGAVPRTSTMALAQGNIDYILEICDKGLEQAI
                     KDNEALSTGVNIYQGQVTNQGLATSHDLDYKEILNVIE"
BASE COUNT        10000 a         6343 c         5625 g        13284 t
ORIGIN      
        1 tttccataac aaaagaagga ttaaaaaaaa tctgatttgt actaaattca ttgttgaaac
       61 tcatcttaaa atcttccatt gccttaactc tatttgataa attaatcatt tgtctaaatc
      121 caataacatt ttcatacgct tttttacttt gcttatctaa attattaaag acttcaatat
      181 caaaaaaatc taaaaattca tgctgttctg ttggaataat ataagctcca atcatctttt
      241 tagccttttt aaaacaatct aaatatatcg gatatatttg ttctaaattg atttttttac
      301 gttgtaagtt agaatctgta aaatacctaa aaatctcttt aactgaataa agcacaacac
      361 ctcctgctaa agtatatatg cttcctatta tttgctcgtt catttttatc tacctcttta
      421 taatattttc tgaaaaggaa tctataattt tatacatacc aaaaattcct aatgcattta
      481 ttatcactcc atcatcaata atatatatgg atattaagaa agcaaacagc aaaacgatca
      541 aatcataaat aaatattctc attattcact cacctccgct cgaaagacgt aatcactcga
      601 cgcctctaca tcatcattag ccgtcatcat aatatatact tgctcagtta catacttacc
      661 taactcgtac attgctagta ggaataataa tcttagtatt tgcttaatca tttcccacac
      721 tcccttatat tttcaaacaa ctgacccact ttaataactg cacctctttt aacttgcgcc
      781 tcgtacctct ctttcgcttc ttctttactc tctgcctcaa caactgtaaa cctttgattg
      841 ctcttagctt tagttatgtg tgtatgcttg cgtcctgttg aatctttgaa tgttgtgact
      901 aggtattgtg tcacttcccc aaaacctcct tgactcgatc taatatgtct ttacacgtat
      961 ccttttcctg cgtctgctgt tccatcttgt ctttcatgat tccttttcat tttctttttg
     1021 tatgcgtcaa tgagttggtc gatagaatat aagttgtaag ctatgtctat cactataaca
     1081 attgcttgtt ggtcgggata aaattctttg aatattatct gtggtgtact aacaactgcg
     1141 tcttgagcaa attctttatc tttaaaatta aacattttgt gaaattctgt atctttaaaa
     1201 cttgattcaa tcgcttcttt tatctcttct gatgacactc ctacttgatt cgcaatactc
     1261 aatccaaacg ccaacatgtc agctaattca tcaagttgta cgtctaacgg cttacctggt
     1321 ttcttcttcc agttcttaaa cgtttccaat gtattaaacc attcaaagaa ttcaactaca
     1381 tatgctattt tgctatctcg taagttcagc gttggtattc tatcgtcgaa ctccttttgt
     1441 atttgtaata actcttgtaa ttgatctact gttaaattat tcatttattc gttatctcct
     1501 atcgttttaa ttcctcaata aatttaagca ctctatcaat atcaatctgt tcattttctg
     1561 acttgcgttt attcaaccaa taatctaact cgtaccacca gtcgtcgttt aaatactttt
     1621 cttctagcaa tgcatcacgt tggtcgatga tttcaagcat ttactcgtcc tccaaaaatt
     1681 caaaatatct ttcaatctca tgctcgttag caaagtaata tctatgcgtc ttatgagatt
     1741 taggattaat ccaaataatg taaataggca tcctttgaaa tgataaaaat caagttaata
     1801 acacttcttc actaaaaatt tcaaagaaac ctaattcttt ttgaacctct ttcacattat
     1861 cttttgttac gtataccgac tttaagtttt tatttttgat aactgggtgc ggcaccacat
     1921 ttttttaatc gtttccattc cactcactcg tcccccttaa ttagataaat tggtttagta
     1981 ataaaatcta taatgctaat aactgaatca tcagacagtt tataatgtgt atctctaata
     2041 tctccgacca attgcacaat ctctagactt tcgtttgttt catggttata tactttatct
     2101 cctacactaa tactcatttt cctgctcctc ctcatattta tagaccactt gccccgtcat
     2161 aatccctact gcttcatcaa gaccaatatc ttctttgagt gcatcttgca tagcattagg
     2221 taaaccctca agtatttcat caaacgcttg cgctttctta tacacgtctt caacctcttt
     2281 tagtaatccc tctgtgtcat taccgttata ggcactagca ctgataattg attgttcaat
     2341 ttgttcgcgg ttattcatca tttccatctc ctctaaaata aagttagttg cttctgctcc
     2401 tcgtattcca aaccatgttg ctttatatat gtttcgagct cttctgctgt atcaaatgtc
     2461 tttttcacgc cttgccaacc tggtacgata tgcccatgaa agtaataagt gccgtttact
     2521 acatgaatat gtgccactcg ttcgttatcc tgatacagat atctcttaga tccaaagaat
     2581 tgatttaggt attctttgcg tgcgttatct gtcatgatct acttcttaac tttcacgaat
     2641 atgtcgtttt ccatcaggta gcacgcataa cgtcctcttg gatgtttctg tggtacatta
     2701 aacaaatgtg gcttctttct tcttagctca gcctctctct ttcgctttct ttccaatttg
     2761 cgttcgagtc tagcttgttc cagtctttct attgttttct tttctctgta ctcgcttaaa
     2821 cgcgtacctt ctggtgcgtc cattgcttca tgtagttccc aaccgtcttt tactctctta
     2881 gaaaccattc cagcggttat accgtgactt tctattaatt ccatttcaaa tttactgaac
     2941 ctataaggtt tatcgtttat tgttacaatt cttgcttttc tcgccatttt atccacctct
     3001 tatatttctt ctattcgtat gattattttg ggctcaattc cataacgctt tgagctagtt
     3061 atttctgtaa tttggttatc gtctttccat acatgaccat tacaagcatc taataccgtt
     3121 ttaattaagt tatcgatatc ctgcttagtc actttatact gtccaaccat ttcaattttc
     3181 tttttcttcg accatgattt aagcaatgga aagtaaaagt ctaattcgat ttttagtgcg
     3241 cgctctagat ttaacttagg catttgccct tgtatatacg ctttatgctt tgtgtaagac
     3301 gttggcatgt aagtttgaac aaatctacct gttttacgaa agcgtggacg aggcgacccc
     3361 atcggcgcat taaacacttc attaaattta atttctatct ccatgtaatc cctcatatat
     3421 attcaaataa gcttgtttgg tgtcctaact ccatttgttc attatcaata agtgtattta
     3481 attcataatc gtctaaatac caacgacgac cattaaattt tgtttctttt attccaacaa
     3541 ctaaatgccg accatcttta aaatgtggtg taactgaaaa cattttgttg ccgtcatgat
     3601 caaatagata gtatttatca aatgcatcca ttttcaatca ctcccatttg ctatttagac
     3661 gcttaataaa agcttctctg tctttctcaa ggttttcatc tacttccggc gttttcgttt
     3721 ctctcgtgct gtctgtgagc catttgggtg ttttttcttt cgatggttta acataaggtt
     3781 tattagtttg ctttttgctt tccagttgtt gcttttcaaa tgcacgtact tgttcaatag
     3841 atttcaagtt tgcattaagc catgtattca aaatgctttt agcatatccc caagtaacct
     3901 tgtttctgtc tttagcgatt ttaagtgatg cggtaactat ttcatctgaa tcattttcaa
     3961 atgaatcaag ataataattt aaatcgtcta aattgtaagg agttatgaaa ccgaatccgt
     4021 tatcttgaaa gaagtcgaag gcggttacct tcttcttctc attctcatca ttctttacat
     4081 tatccccatt ctttacattc ttgtttgtgt tgatttgttg tccatttgtt gttgatttgt
     4141 tgttgatttg ttgtccattt gttgttgatt tgttgtcgtt tttgctgtcg gaattttctt
     4201 ccatactttg ataaatcgcc caattgacaa cggttataac agaaaatttg ttgtcggact
     4261 ttacgacgat agttccaagg ttttctaaaa gctttatgta gtctcttact gtggattctt
     4321 tgagacgtaa ctcttcgctt gctcgctttc tcccgaacac aaattgacct ttttctaatt
     4381 cgacaacccg cctgccaaca agctgtgtat gatccttatg actagctttc ataagacaat
     4441 atgcaaatac tttgaataac ttttcgttct gaaaaatagg cgaatctaat agttttctat
     4501 gaagttttat ccaaccagtc atatacacac ctcactttca aaccggttaa attagaatgg
     4561 taaatcatcg tcatctattt caataggatc attcgcattt gcgaacggat tatcttttac
     4621 tggtttgtta tatggatatt gagactgtcc acgtgattgt tgcgcttgtt gtttgtataa
     4681 atcttgttga ttatcatttg tgttcttcgg ttctaaaaat tgaatactat cggcaacaac
     4741 ttccgtaacg tatacacgtt gaccttcctt attttcatag ttccgcgttt gtaacctacc
     4801 atctacgccc gccaacgatc ctttagatag gtatttatta acgttctctg cttgtttttt
     4861 aaatacaatg acattaataa aatctgcctc gcgctcgcct tgtgcattcg taaatgtacg
     4921 gttaaccgct aatgtgaatg atgctacatt tacaccactt tgagtggtcc ttaattctgg
     4981 gtctctagtt aaacgaccaa ctaatattgt tctatttatc atttataaac ctccaacata
     5041 aacggggacg cccgtcactt tttgtatttc acttttaatg tattttgcat ttgaattttg
     5101 actacttaaa tgtatttctt cgagtctagt taaatcattt gcttttaaca ttccgatagc
     5161 atgttctaag ctaaaatgag actccataat tctatttgct aatgcgctgt gtacactgcc
     5221 gttttttatg ttttcttgca tttgttcata gatataatta acttctagca tcatgtgtgt
     5281 aatgccgtta aatttgtatt tcaaatactt tgtatcagta acatacagaa ccttataacc
     5341 taatgtgctt tgtaataaga aagccacagg ctcgttagca tcatgttcaa tgtcaaacgg
     5401 taaaattgac cacgtaccaa ttcgtagctc ttgttttgcc ttaatcgtgc atgagcgatg
     5461 actttcaaaa ttcatagctt gttgtgttcc agcagtcata tagctgatta caccattgtc
     5521 gacaaactgc tttgtatact ttgcatgatc accatgttcg tgtgtgataa gacaccctgc
     5581 tatatgtctt gttttatatt tgaaatgctt ttgaacacgt tcaaatttta tacctgcctc
     5641 aagtagtaac gtagtacgtc catcatttaa gacgtagcag ttaccacttg aaccagttgc
     5701 tattgtttca attaaaatgg ctcttcttcg ctttcttttt ctgttgcagg tttttttatt
     5761 tcttcaaagt cagatacatc aataggctta tcattttcta attctgtgta ttgtgcttct
     5821 tcaagaactg gttgttcaaa gtccaattgt tcttgatttg cattttcttc aacttctgcg
     5881 tccaacactt ctttgcgttg acgttgttcg gattcttgtg cgtatttgaa aagattgcta
     5941 tctgttgatg tgttgatata acgtttagca gctctattga taactgtttt tttagccatt
     6001 tcttctttga aattattatg tgttttagaa ttttgtaatg ctttttcatc tttaatcatt
     6061 gatgactgca tccatgcttg tttaatttgt tcaatagtca tgacttcaat atagttatct
     6121 cgtccatcat taaatacgat tgtgcagtac gcaccgataa tgttttcttt gtcgatgtta
     6181 aagaagtctt gttcgtgttt aatcgctttg atacgtcctg tttctcccat ttcttgcttg
     6241 aatgtatcgc ctttataaat cacttgagca acaacatctt gagcacctgc atcacgtttt
     6301 aacatcatta cattaccgtg atagctacgt tgtaactgca ttttgttgcc gtaaggaata
     6361 aagtagcatt gatttttagc tggatttaaa ccttgcgtta ccatgtctaa taaggcattt
     6421 gctttgcttg tatcgttaca actcattaat ttgttatctt ggctgatttg taaccatgct
     6481 tgtttcatgg cattacttgg tgaataatca tttggcaatt ccaaattgcc ttgtgactct
     6541 aaaactctca ctttgtttaa tacgttgtca gatacgttct tttcttgtac taattgttgt
     6601 tcaatagttt gtaatttatt attttcagtc attttatata gtctccattc ttaatttttt
     6661 atcttgttca tttactatca attgaatttg ttgtgattct gttttgataa gctctgttac
     6721 tgattcagca ttatcaataa atattggcgc tgtaacttta aaatgttttg acagtgtatt
     6781 aatgatatct aagccaacat taattcttga ggcgttattt aaaccgctgt cgtattcgac
     6841 gccgttaacc gttgtggaac atgtttcttc taattcgccg ttaactaagg tattgaataa
     6901 cttaaattca gcaatatcaa attcgttatt gatattttca gtaagcattt tgacttttgt
     6961 tgttgtaaat tcttttaaga tataaaggtc atgtgaatac ttttcttttt catccaataa
     7021 tctgtcttct tcatttctta attcagaaat aacatcatct agatgtttat ttgatttttc
     7081 gattgatctt gacacttcaa tttctgattt ttcttgagta agttcgctta ttttgtcatc
     7141 tattcctgaa actttatctt gaatagtttt cctgatgtta gagcgttttt gattaatctc
     7201 atttatctct aacattactg ctttgtattc gtcagtttgc gtaacgtcaa cgtgagttgt
     7261 tttcaactta ttaattttgt tttgtattct tgctgaacgc tcttctgctt cgttgatttt
     7321 aatttgaaga ttattattgt catcctctaa cttctcgatg attggcttta ttttcttgcc
     7381 ttctgaaata atgtgattga tagatgtttg tattgtttct aattctttcg atttgctagc
     7441 attgaatttc tgcaatgctt tttctcttgc ctcattcact tgttcagctg gtaactgttg
     7501 accacaacaa ctacatacat tatcatcaag atattcaaat ttttgatttt tagctttttc
     7561 taaatcactt tttaatcctt tatgattttc taataattga ttacgtctat tttcttcatg
     7621 cgtgatttgt tgtttgtttt gctttaatct cgttttaagg tttgctaccg ttccattttc
     7681 aacgtgtaat tcatttgtta aagcatggat tttgttctca ttacttgcgc tgttattgtc
     7741 ttctatgcgt ttcaattctg attgtttatc agctaattga ttacgcaaat taatttcttc
     7801 cttaccgttt tgaatatcta tacgctcatt ttcaagttgc tcaatttctt gtttgataat
     7861 tgcgtatcta tcattatcga attccggtac atcctgctta ttttgttgtg tttggttaat
     7921 acgtatcgga atatctttga tatctttgtt aatctgtttt atcttgtccg taagaatctt
     7981 tttctttgtt tcaatttcat gatctccaag aatattattt aattctttaa aatcatcatt
     8041 tgttttaatg acatcctcat cattgattgg tttagcaatt tcaaacaaca aacttcttcg
     8101 cttcttccaa tctagtaagt taaatgcttg agggttcgta attaacttga atacatcttc
     8161 atcaatcagt tcatcaatac gagctttata atcctttact tttattgatt catcattgat
     8221 atattgtttc ttcgttcgac ttcgtgagta ttccttgcga ttcgtttttt gatttattgt
     8281 gtatttagga tgtgactctt ttttaaaagt cgtaattttt ccgtcgattt caaattctgc
     8341 gaaaacagtc ggaattaact cataattttc ttcgtttttt tcgtttaaag gtacagggtt
     8401 aaatgatttg gttgatccgt ccaaaccttt atcgaaaagc agccattgta atgcggttgc
     8461 tgttgtagtc ttgccagtcg cattattgcc gtatattttt gcatctttac cgtcaaagtt
     8521 aaatttttct tctttgattc cagcaaagtt cgatatagtt aacttattta ttttcatatc
     8581 tttcctcatg ctcctttttt aatcttccga tgacctctta gcacctcgat aattaaattt
     8641 tttattcgtt catggctgtc tggattgatt tcatgtatct gcacaagctt attgtttgtt
     8701 ttgtaactgt cgtgatagtg taagaaatta atcgataagt atccgtgatg attacgttca
     8761 atttccaata atgctcgttg gtttgacaaa gtatattcgt cgaataacgt cttaaaaata
     8821 ttcaatatat ttctttctgt atctctcatg cttataccta ccatctcatg actaagttaa
     8881 ttagcctgtc tctttcgtct gtgttctctt caatccattc ataaatagat tgatttaata
     8941 tgtctaatgc tgtgtataga tcattctcat ctgttatatt tatactgtcg ataaatctat
     9001 cttctaaatc taagacattc actagaatgc tgtaatcttg tttcttaact gctaatttaa
     9061 aatcgaatcc gtctacatta attacttttt gacatacatc gccaattttg tagtacattg
     9121 ttgacacttc ctttatttcg ttttatattg aatatgcatt aattttctaa ttgtttagac
     9181 tgttactcat tgccgtgagt aacagttttt ttattcttca taaaagtatt ccttataaaa
     9241 tatgaatgtt gcgatacttg cgaatcccgc aatcgaccat gcagtagtga agtatagaaa
     9301 cggcataagt acaattgcta agactgtaaa gcacagtact gctactaggt agcttttata
     9361 aatgttgctc attttattct ctccttatat atttcattga aatgctcatc gacgaattta
     9421 ttcatctttc ttgcgttaaa tctccagcga ttaaaattct catctgggta atgcacaatt
     9481 ccttgcgctc ttagttcttt ttcaaatcta ggatgaaata gtaatctgtc cttgatagtc
     9541 tcatcagatg caatttttaa tttcttcttt aagtcactca tgttccatac agggtctaat
     9601 gaataaccaa ttagctcatc atattcatct tttgtgataa gtacatgtgt ttcaggtatt
     9661 ggaactgtta cgtttaaaat atgtggcatt tctatctttc ctttcgtgta taatgttgtt
     9721 atctcctagt gaaaggaggt gatattggtg tatattgatc ctttaaaaaa tgttcgtttt
     9781 tctattaata acgtaattag taatgttgaa atttctaaaa gtatggcaat taaacaatct
     9841 ttaaaaccta agtaccaatt agatataatt aatagaaaca acataaattt attttctgac
     9901 ttcaaagtag actttcatct aaacaactta attgaaatga attttaattt gcgtaattct
     9961 ttttcatctc taacatttca aagaaattta ttttctgaag aaacgataaa atcttttaag
    10021 gaactctata ggtttgatga tgagattgta cttcaagcac aacagaccat tagagatttt
    10081 tatatcaatc caactgctat ctctactttg gctgaagcca tcaattcgac ctatccaata
    10141 aatgagcaaa gtacctacaa gagacacgat gaatttgtca aacgtatcga aaatgatttt
    10201 ccacatcctt tcaaaaagtt aataagatgg tctaatggca ttgcagcagg tgctgacatt
    10261 caaatctttg taacaaacta tataaacgag aacgatttac atattcaaaa ttcattgata
    10321 gttgctatag tttgtttatt aagtttttta tcgacctatt gttcacattc taaaaagtaa
    10381 taataaggcc taatttagtt aaccttcttt aacaactctg caactgctcg caacaattca
    10441 gggttgttac ttctttctaa acagtaacta gcatgcttta gtaatttgag ttttaattta
    10501 tttttttctt tcgcgattct aaatttttgt aacatttgtt atgcctcctt tgcatttcca
    10561 aaaatttaat ataatttaaa ttcgatacca tctatttgaa tgtatagatt atctaaatca
    10621 gggattgcct ttttatataa accaaatctt gatttgatat ctgctaataa ataggtatct
    10681 aagttaccaa ttgataatag tcgtctatta tttgcttcgt catagtagta atagatgact
    10741 tttttgtttt gagcttccat ttgctgtgcc ctcctgttaa gttgtttgtt tttctcctaa
    10801 aaacttatta acaaagtatt gttgtccttt gcctgttact tttggcgtct tactaattga
    10861 tgtgtgaccg tccgaatgtg tgattgatgt ttctttaatt tcgaataact cacgttccat
    10921 tgaatactgt gtaggcatgt tataatccac acccttgcgt ttaataagga atccgttttg
    10981 acgtaaccac tcaaacaatc tgcgttgccc gatgtttaca ccgttttgtt taatgatctt
    11041 tgctaactct ccaactaaaa ttgatgtctt agtagtagct actgcatctg caaatacaat
    11101 ttttggttta tcacgttcaa tctttgtttc taattgattg attgtgttgt tagcaatttt
    11161 taaagcacgt tgcataatca tttctgggct gttccatgct ttttcaactt ggatgaagta
    11221 ttgtcttgca cgtttaccag gttcactgcg ttgaatcatt gcgatttctt ttgcagtgtc
    11281 tagtgtgagt gcgtggtcag tttgattctg acgacctcct agtgggttat ggacaaaaat
    11341 gtccgtgact acataatcga tattttcttc aaatccgtaa tcactcattc tttcaaacca
    11401 ttttttgtat ggagtcttaa cctctaatgc ttgatgaagt tctcgaccgc tgattgcgat
    11461 ttctccgttt tctttttctt gtatgttgaa catttcgccg atgttcgatt ttgtttgtaa
    11521 tgcttgcata ttgtttatgc tcctttcgtg tataatttag ttatcaacct aaggaggtga
    11581 taagtatgga cataatcgcg atttgtatcg caatttttag tttcttactg actgcactta
    11641 aatattattt agactatatg aaagattctc ttaacatcga tgttatacct accagaagct
    11701 ttaattactt ggtcgatgac aaatcaagtt acaacgatat aacatttatt aatttcacaa
    11761 agtttcccat ttctgttatt gacgttgaat ttgatattaa aaataaagta aatgaacaaa
    11821 aaacgttcaa acctatacga tataaagata aaaactactc cattccattt actttaggac
    11881 cttatgaaag tgtagaatgt acttttttgc tcgaagaata tccagtgata tgggaatggg
    11941 atgtgactat caaagtcact accaacaaag gaatctatat aaagcctgtt atcatagaat
    12001 cgcggacaga acaccgagaa tcagagccac aagtgacaga gttaacatca gcaaataagg
    12061 taagtgctct ttccaacccc aaggatggtt ttttaaagaa gtttttatat catttaaaac
    12121 cttaaacatt taaaatcctc cctttccgtc actctttaat tggagtggcg ttgatttttt
    12181 cgtctaactt tttcaatgct aatttgtaaa taactgaagc atgttcggtt ttaaaatgag
    12241 attcagcaat aattttcaat gtttctaatt tatttcttgc atcaccgtat gtggtacttt
    12301 ctgatagaac accttctaaa atttgttgaa ctcgataatc taaaagtttt aagtctttat
    12361 tgatgcattg ttcgacacac tcttctttgg ttaacgtgat ttgttccata gtgtcctcct
    12421 tttaagatgt tatttcgttt ttgtgcattt ttggaactcg ctcaataaaa aaatattctg
    12481 gaaatagttc ttgtataggt gtttcgagag ccttagaaaa aatcatcgct tcatctaaat
    12541 taataggaat ctctccgcgt tctctttttc cgtattgttg acccgaaaca ccaatcaaac
    12601 tccccataaa gtcttggttc tttttcgccg cttttctaga gctatataaa tctttgtgca
    12661 tttttggaac acctcctgaa aacaatacta cacctgatgt tccaaaattg caagtgcttt
    12721 ttacatattt ttttgcctct acacatattt ttatgttttt gttgcatttt tggaactgta
    12781 ggcatataat gaagttatta gttagataat atgtttaaag gagataaaaa tatgagttca
    12841 ttttcttcga atttagaacg tctgatgaac aaaagagata tgagtgatag tgaattagca
    12901 gaattagtag atgttaatag aacaacagtc acaagatgga gaaagggaat tagaagtcca
    12961 aaactagata aattacctga aatagctaat gtttttggag ttaaaccctt agatttaata
    13021 catgatatgg atgattcgaa aattattgaa gaaattcata acgtatcatc tcaactcaca
    13081 cctccaagac aaagcaatgt actaaaatat gcgactaatc aattagaaga gcaaaataat
    13141 gacagtgata atctggtaga tttcaattct tacattcaag aaaaatccga agtggatata
    13201 tatggttgtg cgtctgctgg tattggtgaa agattatata acgagcctat ttcaaaagaa
    13261 ttcataagag gttatgtccc cgcacatgat atagctttaa aagtaaatgg agactcaatg
    13321 gagccgttat ttaaaaatgg acaaattata ttcattgaaa aatctcacac tatcaaagat
    13381 ggacaaatag gcgtctttat tataaatgga gatgcttacg taaagaaggt ttatgtagaa
    13441 gataacagat taacgttggt ttctttaaat aaaaagtata aagatttaca tttttatgat
    13501 aatgaaagtg tgaggttagt tggaaaagtt attttatagg aggtagtaaa atgaatttaa
    13561 aagaagttga cattaacatt gaagagtggg aaatggttga aatccccttt tatacagaag
    13621 aagaactgac ttatagattg aaaaacgatt tacctataac taaaagtgag tttgaagaac
    13681 aggagtctaa aaatgaattc ttataaagaa attgaacact tacacattaa caccggtggt
    13741 aaagagttaa ctcaagagca aatagaagaa gctaaatctt ttatagacag tcaaggattt
    13801 aaagatatga ttcgagaagc taaagagtca cgtcaaagag ttatggagtc taaaattact
    13861 gatagaacta aaatgtgatt aataacgtat atttagcgct ttaatataaa tataaacaaa
    13921 ggagaaattg acatgaaaaa agcaatctta actttaagtc ttatatttat tacctactac
    13981 ctcactttta aatatatgtg gattaaagaa ttgaagtatt aattatgctt atttaaaaaa
    14041 gacgtctatt tcagcagtgt ttgaaaggaa gtttataatg aaaataacta attgcaaaat
    14101 aaaaaaagaa actatagtat atgaagtttt aactagtggt aatcaaccat tcacttatga
    14161 gttacctaaa gatttatcgt cacataatgc gcgtaaatac ttggaattta tttcacaaaa
    14221 aatagatggc gataagttaa attaattcaa agaataaagt aacttcataa agagtacgaa
    14281 gaaaacgatc taatgaccga acttattctt gaatatttag taaaaaagta tgttgaagaa
    14341 gaatatagga aataaacgcc tatatggcgt gaggaggatg agggatggaa gagaaacgat
    14401 ataaagttta tcaaagaggc gaaataattt atgcagattt tggtaaaggt gtaggtcatg
    14461 agttttcata caaacacttt tgcatagtca taaacaaaaa ggataataaa aataacggca
    14521 aagtgaccgt aatcccttta acttccaaaa gcaaacacaa tgcttttgta aatatacatc
    14581 ttataaaacc ttttttaaat acactaaaac aatcaattgc caaacacgag aaaaagatag
    14641 aatcgattga aaacattata aatcaaaatc ccaatgattt aaaagtcatt gtttatgcaa
    14701 ggtttttgtg tgactcctta aagaacgaaa tgaaacaata cgattttgtg gaaaacaaat
    14761 taaaaaactt agttgacaaa agttcttatg caaaaacaca ggatattact acaataagta
    14821 aggatagaat tttaaattat attaaagatt taagcgtttt aattagattg ccgaaacacg
    14881 aaactgaccg attggttaac atctgtttca aaaaaatgag ttgaacaatt ctaaaataat
    14941 gttataatac aggtattgag ggctaaaggt ccacctatat tgatttgagc tttcggctca
    15001 ctgacgtctg tattatacag gcgtcttttt ttatacaatt ttcacgggta gcccgcctac
    15061 ccttattatt ttttgccaat tttgaggagg gaacgcatga aaacacgttg ttacgatggt
    15121 aaaaaatggc aatatgaatt taagcatgaa ggaaaaagat accgtaagaa aggttttaga
    15181 acaaagcgtg aagctaattc tgctggacta gacaagttaa atgagttaag aagtggtttt
    15241 aatatagata actatataac tcttgaagaa tacttcgaaa attggattaa aacgtataaa
    15301 caacctgttg ttaaagaaaa tacctaccgt cattatagaa atgcattaca acatatacaa
    15361 aaacataaaa taggtaaaat ggagttatca aagataaata gacaagttta tcagaaattc
    15421 ataaacgatt attcaaaaga acacgcaaaa gaaactataa gaaaaacaaa cggtgctatt
    15481 cggtcagctt tagatgacgc attatatgat gggcttattt ttaaaaatcc cgcttataaa
    15541 gttaattata aagccggaaa acctacgaag tcagaacaag aaaaattcat ctcggtaact
    15601 gaatatgaaa tactaaaaga tcacgtcaga aagaagagaa ctcgttcatc attagcgcta
    15661 ttcataatga tttgtacggg ttgtcgtgtc agtggtgcaa gaaatataaa gattgagcat
    15721 atcaaccaag tgaaaaacac tatatttatt gacgagcgaa aaaccgatac ttcccctaga
    15781 tatatcagta tcgctaaatc tgatatgaaa cacattatgg acgtcataag tacatttgca
    15841 attagctatg atggttacat tttcaaagaa gccggatcta taattaacct tcaggctatc
    15901 aataatgctt tgaaatcagc ctgtagagtc aataatatac caattattac atcgcacgca
    15961 ttaagacaca ctcattgttc ttatttacta gcaaaaggtg tatctataca ttacatttct
    16021 aaaagattag gtcataaaaa tatagcaata actacatccg tgtattctca tttgttagaa
    16081 gaaaaattta atgaagagga caaaaaaaca actaaaattt tagaaagtat gtaatttagg
    16141 gacccattag ggactccaaa cccaataaat actgttgtta caaggtttct atgtatccaa
    16201 actgggtacc tttcgcattt gtcacttgtg acaacgcgtt ttcaacggca gctttatcta
    16261 aatttgatcc actattttta tttaaaatat tttctgcgtt cgtaacggct tgagtataag
    16321 cagttttctt atctgaatca gcatcatgat agttttcgct cgctaaagta ttcgctttat
    16381 cattaatacc attttgcaag ttagccatcg ctgtattcaa ttgtgtacct gtattagata
    16441 ccgcttcaac accagctact gttgttgctt gatcaatttt agttgttaag tcacgttttt
    16501 gagcattatt aattgacgtt aagttattta atgcatgttt agctgtattc ttcgcatttg
    16561 taacgttttg atcaccattc aatgcatttt tagcacttgt aacattttga atagctgctt
    16621 caacatcttg tttagacgta tttgcacctt gcgttttgtt cagaattgtt tctgctctgc
    16681 ttaccgcatt agtatacgca tcacgtttgg ctttatctgc atcagtgaag ttaacacctt
    16741 gtttaactgt gttttgatca tggatagctt gttccaagtt gcccatttgc gtgtttaact
    16801 cagttgctgc atttttagca gctgttacct cactcacatg acctgcacga tcaatttgtg
    16861 atgagattgc agatttttgg ttattggtta agtgtgataa cgtatttaag ttttgcttag
    16921 cagtgttttg tgcatttctt aagttttcgg caccgtttaa accattttta gcattattca
    16981 cttgtgttgt agcttgagta atcgtacttg catccatagt cggattatta gtttgattaa
    17041 taataccttt cgcatttgac acagcgctat tatatgttga ctggttattc ggacttgcgt
    17101 ctgtatagtt ttgacttgct ttgactgttg tttcgttaga aatactatct cttaagcctt
    17161 tcattgcatt gttcaatgct tgtccatttg tttgaacaga ttgtacgtct tctaatctat
    17221 tggcttgtcc cacttgttct tttaatttag ctttttgagg tgtatttaat tgcgttaatg
    17281 catcaatagc agtattggcg ttttgttttg ctacacgtaa tctttcgtca ccatttaatt
    17341 cttgtttcgc gctgtttact tgattagctg cagctgttac ttctgaaggt gtcgtaacaa
    17401 ccgttggcgt accgctaata atatgttcag cattggtaac tttagttgtg taagcatttt
    17461 gtttagtgct atcggcgtta acatatttac tgcttgctaa cgtattcgtc ttatctacga
    17521 tggcatgttt taatgtgccc attgctgtgt tcagttcagt cgcattacgt tgtacatctt
    17581 gtgcattaga tacgcgttga gcaccattag cttgtgcttt taatgcatct ttttgttttt
    17641 gatttaaatc agatgcgcca ttgattgctg taatcgctgc ttgtttcgca ttatttaagt
    17701 tttgcgtacc atttaatgca tgtttcgcac tattaacatt attaagtgct tgttcaactg
    17761 cagttttcgc tgtattcggt ccagtttgtt tatttaaaat tgtttcggca gctgatacag
    17821 cttgattgta agcattacgt ttttgctcat cagcatctag gaagttttgg ctcgctaatg
    17881 ttccggcttt atcgttgata gccgtttgta agttacccat tgcaccatct aaactattcg
    17941 cactttgctt aacagtttca acaccagcta agtttgtagc ttgtgaaatt tgatttgtta
    18001 aatcattacg ttgtgctgta gtgatatgcg ttaaagtaac taaatgttgt ttcgctgcgt
    18061 tttgagctgc aattaatttt gcatcaccat tcaatgcatc tttcgcagta ttcacacgtt
    18121 gcaatgctgc ttcaactgca ttttgcgcag tgtttgggcc atgttgttta tttaaaatcg
    18181 ctttcgctgc agtaatagca ttatcatact cttgttgttt atttgtatca gcatcacgat
    18241 atttctcaga tgatttcact tgagattcgt tgttaatacc attttgtaag ttagccatag
    18301 cttgatctag atgttgtgca ttttgtttta cagtatcaac accactaact cttgtcgcac
    18361 tactaatttg actaatcaaa ttgttctttt gagcatctgt aatactcgtc aatgagttta
    18421 agtacgtttt cgcattttgt tttgccgtag ctaagttttc atcaccgtta agtgccgttt
    18481 tagaactatt cacttgctct gctttttgtg taatcgtact tggattcatt tctggattac
    18541 tattcgcatt aataatcgtt tcagcagcaa ctactgcgtt gttatatgct gtttgcttat
    18601 cattattagc atctacgtaa tcttcacttg ctttagtcgc atctttgttg gcaatacttt
    18661 gtcttaacgt attcatcgct tgatctaatg tattcgcatt tgattgaacc gtatgaacac
    18721 cagcgacagt agtaccacta ttaatttgat ttgttaaatt cgttttttga gcagttgtta
    18781 aatgcgtcat attatttaac tgctgtttcg ctgtttgctt cgcttgatct aataaacgcg
    18841 taccatctaa gttagtttta gccgaattca cttgattcat cgcttctgca acttgatctt
    18901 tcgttttatt ttgaccattt gatttattta aaatatcttt cgcagcttgt accgcatttg
    18961 tgtatgctgt tttcttactt ggtgtcgcat cttgataatt ttgactatta agcgtcgttt
    19021 gttcatcgtt gatcgcacct tgcaagttac ccatcgcagt atttaaatct gtaccttgtt
    19081 gtttaactgt atttacgcca gcaatatttg atgcagcatt aattttagat ttaacatctg
    19141 ctttttgtgc attatttaaa tgtgataatg catcaattgc tcttgcaaca tctgttttag
    19201 cttgtgctaa tttttcatca ccatttaatg catttttatt attagtaaca gctgaagttg
    19261 cacgattaac atcatcaaca gacatcgttg gatttgttga ttgattaatg attgtttcag
    19321 cacttgaaac tgcactgtta tatgcatttt gtttagctgt atctgcatcc acataatctt
    19381 ctgtacgttt cacttgctct ttatctgcaa cagcatgtct taaattaccc attgcactat
    19441 ttaagtttgt tgcattttgc ttaatcgtat taactgtctc gatttgatgc gcaccattaa
    19501 tttgcgattg taagttttga cgttgtgcat tattcaagtt atttaaatga cctaatgcag
    19561 tgttcgcttc ttgcttcgca gcatttaatt ttgtattacc attcaatgct tgttctttac
    19621 ttgtgacatt tgataaagca ttgttaacat cacttggtgt tataactgga tgttgtgcat
    19681 taccgttaat aatgtcattc gcatggttgt atgcattgtt gtaatcattt ttcttattag
    19741 tatctgcgtt gacataatta tcgctttgta cgacttggtt atgattagca acgccacgtt
    19801 ttaaacctgt cattgcagta tttaagcttt gagttgtttg tttaatatca tttactgctt
    19861 gaacattttg cgcactattc acttgttgtg ttaatgcatt cttttgcgct tggtttaaat
    19921 cacttgcatg cgtaatcgca tttgttgctt ctgttttcgc acgctgtaag ttttgttgac
    19981 catctaaagc atctttagtt gatttcacag atgctgcttt ttggttcact gtattaacat
    20041 ccattgttgg attagtcgtt tctccaataa cacctttagc tgcattgact gcattgtcat
    20101 acgcttgttt attagctggt gttgcgtcag tgtaattttg acctgattta atcgtattat
    20161 tatccgcaac actctctttt aatttcgtca tcgcattatt taaagctgta atgttagact
    20221 tgatcgtttc aagtgctgca tgattttgag cagcattaat ttgttgcgtg aaattatttt
    20281 gttgtgcttg gtttaagtta gatgcaccat gtaatgtatt taacgctggt tgtctatcta
    20341 atgttaaacc ttgacgtgct gtatttaatt gatccttagc ttggtttgct tcagtcactt
    20401 tatcattgat attttggacc gttggattgc catttaacac ttgattaatt tcagctaact
    20461 tttgacgcgc tgcttgtaat ttttggttgt acgcatttaa cgaagcggtc gtcatacctg
    20521 ttgtatctgt aggttggtta atactttgtt ctaattgcgt tttcgcagtt tgaagcggcg
    20581 ttttatctgg tgttaacgct tgacgtgcat gatccaaatc agatttagct tggtttgctg
    20641 cagacgtatt tgtattaatt tgatctactg taggtgaacc tgctaatact tgattgattt
    20701 gttgaatctt attacgtgca gccgttaact tcgcattata agcatttacc gagtcttgtg
    20761 tcataccagt tgtacttgtt tgcgtgtcaa tactatgttg tagttgattt ttcgcatttt
    20821 ctaaaggcgc tttatcaact gttaagccat tgcgtgcttg atcaagtgct gttttagcag
    20881 cattcgctgc tgtcacgttt tgacgaatcg ttgcaacatc tggatgagat gccagtacgc
    20941 gatcaatttc ttgaatttta gttctagctg ctgaaagttt ttcattaaat gtagcaacag
    21001 atgcgcttgt cataccagtc gtactcgttg gctgatcaat atcattttgc aactgagttt
    21061 tcgcagcttg taatggtgcc aagtctggtg ttaatccagc aattgcttgt tttaagctat
    21121 tatatttttc ttctacttta gctttttctg cggcaatttg ttgatctgtc gcatcaccat
    21181 tgttaataac attttgtgca tttgttgatt ctgtttgacc cacacgttta gcattttcat
    21241 atgcttggat tgatgattgt gtcataccat cagtagttac tgatttattg atttcttcat
    21301 caagtttcgt cttagctgtt cttaaagcac tattatcagc taaaggtact aattgattaa
    21361 tagcttgcgt taatcgctca tttacacgat ttacatttgt taatgcagat tgtacctctt
    21421 gcactgttct tattggcttt tgaataatag cgttggcact atttttagca cttgttaagt
    21481 cactttgaag tgcacgaatc gaattattgt acgcagtaat acttgctggt ttcttaccag
    21541 tcgttgtacc tgtacgattc aattgttgta ctgcttgctc taaggcatgt gtatctgcag
    21601 ttaaatcatg tttcgcttgg tttaatgctg ttaatgcgtt atcgacacga tgtttttcat
    21661 ctgaaatttg ttgtgcagtt gcatctccat tgtctataac acgttgtgct gcagttattt
    21721 cagtttctgc ttcacgcttc ttcgcattat agttatcaat actttgttgc gtcataccag
    21781 cagttgatgg tacttggttc acagaacttt gtaagttatt tttagatgtt actaattggc
    21841 tattatcttc tttattttga agtaatgctt tagcttcatt tatcttagtt tgtgcagctt
    21901 gaactttaga taatgctgcg ttcacttgtt gtggtgttgc acgatcatta ttaataactt
    21961 gttgcgcttc tgttttcgca gtattgattt gttgttgcgc attatgaatt gcattattgt
    22021 actgcgtaat tgtacctggc tttttaccat ctgtactgac tggatcatct aaatgatttt
    22081 tagctgtgat taactcacgt ttatccgctt ttgtgaaaat ggactcttgt acttcttcac
    22141 tactgccatc attgtaagtt actgtcacag gaatcgtcgt tgtgctacca ccagctaaat
    22201 tagtaggcat tgctgtgcca tttttaattg ttgcagtacg tttattagca acttgaactg
    22261 cattgttaat ttcagctgct gttacattag aaccataatc ttttacaatt tcagttgtgt
    22321 tgacagtatg agttgccggt gcagttaatg tacttgaatt actacttgct gagtgacctg
    22381 tacctgcttt cggtgtaatg gtaattgctg aattcggctt gacagtattg gcattgaatg
    22441 tcactttacc agtttgtgca tctaacgtta catagtcagg cttattcgca attgtccatt
    22501 gattattttg accacgaaca acattaattg tcttactatg ttctgcacca ttacccactt
    22561 tttcagtgta agcaatatcc attgcttgag ttggattaat taaatgccct gttggattat
    22621 taggcgtgat atcaatatga ccattttgcc aaatcttagt agtcgcttgg ttcggttgtg
    22681 gtgcgacaac tgtgaaatca tcactacgtt gttcgtcact gattgtttca ccactacctt
    22741 gtgttgcaac aacttgaatt gtatcagcag gattgaaagt acctgctgca acagtaatac
    22801 cattattagt tccagcaata cctgctacag ttgctgcaga tgcttctttc acccatgggc
    22861 tcgtattatt gcgacgtgta aatgtcgtca caacgttacc attacgttta ataactaatt
    22921 tatcagcata cgtcgttacg ttaccggcat gtgtattcac tgtttggttt gctccaggtg
    22981 caattgtaat cgctcctgcc gctgtttcag tcacagttgg tttcgctggt tgcacatctt
    23041 ttactacaaa cttcgctggt agtgatgttg caaatgtatg tccattatag atgacatcat
    23101 attttgcatt aacgacttta gccatattgg gtttattcat agctgcccag tttgcatcgt
    23161 ttgtacctgt tgctgcatta ttccatttat acgtaaatcc atctgttggt aaacctgtag
    23221 cattttgcat ttgtgcataa cctgatgctt gcgtaccact tgctaaagtg ccaccaactg
    23281 ttgttgtata agtagtttgt gggaattcaa attgatatac attcacagta acaggtacac
    23341 gttttgcagc tgaaatgcct ggataagtta catcgacatt taaatgttgc acgcctgctt
    23401 gttggttatt tggttgttgt ctatttgccc atgctgcagt gataccattt gtgtttgtat
    23461 ttggatcaaa tgtaatgtag ttcatcgcat ctgttccatt agtcaaattt tgacctttca
    23521 catcacgtga tggcgcctta gcattagcaa ctggataaac tttgactgga acttcaacat
    23581 tacgcgtacc ttgaccacta ggtaatgtta caaccgcagt tttatgagtg ttgccgactg
    23641 tattcttcca tgtatctgga ctatcatgcc atgcaaccgt tgctccatgt ggtgggtttt
    23701 gaataaatct ttctacgtgt ccgaaatcaa aaccgtcgcc acctttaata aatacagcgc
    23761 cttcagtagt tgcttgtaat tgtggtgtca ctgttactgt tgcactgtca tttgaatcaa
    23821 cagattcatt tcttgttaca tctatcgctc gaccatgttc atcttgagta gtgtacgtca
    23881 cattattcat tgtgatagaa gaccttgcct taatcacacc atttggtaac gcatcactta
    23941 ccgttacaac agcagtatta ccactaccat aagtcgtgtt tgtaatcgtt aatggcgtat
    24001 tatctgcttt aaataattta atagatgaac tacttaacac attattaatt ttaatttgtt
    24061 ggttagtaag acctgcttta taagtcacag aattgccatc aattcgcggt ggatctggtt
    24121 taacttttgc taaaatcttg ataatttgcg tttggtgatt atcataagta actcgaatat
    24181 cccttgttga aataccaacc acatctttac ttggtccata tgaatttgta aattggaaat
    24241 tcatacgttg cgcattttgt gtccaagaat cattaactgg tttaacatat tgtttcgcat
    24301 catacacatc agatacacct gggaacacag cgcctctatt cgtctcaaag acatgcttcg
    24361 gtactgaact tactacttta tatgttgctg ttttcgtaat cggcgttgtt tcgccatcaa
    24421 ttaagatatt tgctgttaca ttaatatctt gaccaatacg cgtattatct ttatttggcg
    24481 cttgtccact tacccatgta atagttgcat ctggaatggc actaccatta gataacttaa
    24541 agtaatctga tgcactagaa ccattacctg ctgggaagtc ttggccttgt acagtgtaat
    24601 gcgaatgtgc aacgatttct ggaatgacat gctttacagg tacagtcact gttgatgttg
    24661 ttccgtcttg ataagtaaca gttactgtga cattggcatt atttccagta cgactgacat
    24721 tactaactgt tttactagtg atttcatttg cgcttgctgt tgcatagttt ctatttggta
    24781 ctgtttcagt aaacgttaat gaattaataa ttgccgtttg atcagcttgt gatactgtcg
    24841 cattattcga aatattggca attctcacag gattagcagc cgttgatgaa gtaccaactc
    24901 gatatttatc acgcaaaggt ttcactgtta cattgaatgt agttgtagct gtattaccac
    24961 ttgtatcagt tgctaataaa ttgattgtct tagtagttgc tgatgtcaca tttggtgctg
    25021 ttgctgaaac atgttgatgg ttattatcaa cagtgcctgt aatttgtgat gtcgttggta
    25081 cagttaccga ttgcacacca aagttatcat tcgctgtaat agtatttgta aatgtttcac
    25141 ctgagaacac ttgatgatta gtataattac ctactgaaat tgtaggattc actaaatcac
    25201 ttggtacaaa ataaatgtta atagcgtcag tagtatttcc tgtattttga tttaaatgtt
    25261 caacatattg ttttggccca tatggcgtta agtataactg cgctttataa actgcatcac
    25321 ttgcattatg tgtagaatta ctttttacaa cgtggtctat tgtaaatgcg ccagcaccat
    25381 tagctgccgg ttcatttacg ttaacaacag ttgagttact atggtttgca cgagtatttg
    25441 aatttgtaac agtttgccca ccataaccgt ttgaagggtt gatgatgtct aatatttgaa
    25501 tcacttgacc attcaacgta tattgtcttt ggccatcaga agatgcattt gcttgtgaat
    25561 aaccagttgt tctatagttt ggtcttccac ctgcttctgc ttgtgctttt tcattaccag
    25621 taatattatt acgcaatcca ggcactgtag tagtcgcttt tagcatcgtt aaaatatcat
    25681 tagttgtaat ttgtgtgcct aatgtagcat cataacgata aattaaagat ttatggtcat
    25741 cggaccatga taaaccacca tctgttggtc tgtttgcaat ttttgcattc gtccatgtca
    25801 ctgtataatc ttgtgggaaa ttaacccaac gcaagaaatt catattagct aggttagacg
    25861 cgaatgattt cgttaatcga cctttattaa tatttactgt aatagtactt acattagcac
    25921 cattaggtgt atttgtaact gaaatatcac cttcggcaag agtaattaca tctctatttg
    25981 cattaataaa agcttgtttt acttttgaga tttcatcagt agttaaatca tatgttgacg
    26041 tacgatatac acgttgatcg ccttcaggtt gtttcacatc aacgattttt aaactaatat
    26101 agaaatcttc tgtgtcttta tgatatgcat ttgaagcaac tatatgatat aactgcgtac
    26161 ctgcattcat ttgactaact tcttgtgcag ttggaatagc tctatcagat gtaatatttg
    26221 taaatgttcc acttggaata gcttgtccat tacttaaagt aaaatattgt ttaatatcac
    26281 caatattaaa tgattgtcct ttagcaatcg ttaccgttgc tgttttagca gcattggcag
    26341 tttggtattc aggtttcaca actggttcgt atgtcatcac atttgtagca tcaagcgtcg
    26401 ttgatgaacc atcacggtaa tgtaatgtga cattaccatt attatcgaca gttactggat
    26461 tagatgaagc taaatatcct cttatatttt ggtttttatt cataaaggca gtaattatgc
    26521 tttgcttttc atcattagat acagcagtcg gattgactac tacaactttc tcagtatttc
    26581 ctaatacaat cggatgagca tcttcactaa ttttacctac atgaattgac acatgtttag
    26641 attgactatc atttgtcgta ttattgacat tatctgtcgc tgacacttta aatgtaatat
    26701 cactgttaaa tgcctgattc atagagactc tacctgtaat agctaatgag ccgtttttgt
    26761 tgtcggattt agttaaattt gatgtccaac cacttggcaa tgtcgtaata gttgtacttt
    26821 ttattccaga atgtctatca gagacaccca ttgtaaagtt gacttcgtcg cctcgatagt
    26881 atttggcatt tattccaaca ggattattga ttgttggtgg aatgtcatct ggcaaaatag
    26941 taacagcatt actcatatta gatgcaacta ctttattata ataaactact gctctaattt
    27001 gtttacctac aggtggtatg aatacaacat aatcttgcgg tcgtatagta attgtgttgt
    27061 gcaccccatc aggtgtacca gtcgcaagta tcgtataacc cgaaggtatt tgatccgcct
    27121 cagtaccacc attcgtagtt tgagcagttg gtgcaactaa ataaaccaat gctgatggat
    27181 ccaacggtat tcctgaaata ttaacaggaa ctttttgtaa ttctgtacct cttaattgct
    27241 cagctgtcgt agttatggtt ggtgtatgtg gtttaacacg aatttcaaat aattgttctt
    27301 tacgtccaaa acgtatcgtg ccaaagtaat cccctggtaa taagttacca actagttcaa
    27361 tattgcgttc tctggcatta ttaggtctat ttgtcgaatt ttcaatgtgt aatgtacgcg
    27421 gaatacctgt aatttgccaa tctttatctg taaaattctc attacttgtt aaattaatac
    27481 gtaatggttg aatagatgtt acgctaccac ctaaattcac ggaagcattc ccttggttac
    27541 ctgcatatac atagaaaact ggatgcccag cttgttttga aaatggtttt tcagcaatat
    27601 tttgagtatc gtcattttta tagaatttaa tattatgttg gatttcaggt aatactgtta
    27661 agttaacagg aactaaagtt tcactgttac cataaccatc aggatagtcg aaaccaatca
    27721 ttaatcttat tgggtttcta gttcttgctg cttcttgtaa tttttgatca gtaaataatt
    27781 gacttaattg atattcattt aattcttggg ctccacccgg tctaaaagca ttagtgtttg
    27841 cattagtcga ataaaatcct aacactttat tactcggcgt cttaacataa cttaatggat
    27901 catcaacaaa atcatctata tttaggtttg tactttctaa tacctttttc gtttgtacat
    27961 ttccttgact cacttctaca cgtttagttg tacctatgcg atatgtacga ttaaccactt
    28021 gtcttaaacc attaagacgt tgttgatggt cttgagttga ttcgacgtat agttgactgt
    28081 acataaataa ttgattgtac tctaaagcac gcccacctgc tgcatagtac aatttattaa
    28141 cagttggccc ttgtgtttta aatgaaattg tataacttgc atcaccttga ccgatgaaag
    28201 tataaacttt aggaacaccc ggtgattcag caggtttttg accattaata tattcaaaat
    28261 tttgtctacc aaatgcttta gtagcagctg ttgctccagc ttcactaaaa taatcactcg
    28321 ctctagataa atcttctaaa gaataaatat ggacagttgg ccactcatat attacttggc
    28381 cacttctatt tcttatttta aagtcatgtg aacgatgagg gtcatttact ccatattccc
    28441 acatttgttg aagtggttta tttgcacctg ctcctgctcc atgactccat tgtacatttg
    28501 ttccatctga attaactgtt acaaagtcag ttcttcctac tggcacttgg tctgctggta
    28561 atgcaaacca gaaaatcata ttttgatgtg gagcatgtcc tttattaaac ttaataaccc
    28621 attggtagcc atctccagtt tgtttcgctg tcataagagc aatttccttt gagtcagagg
    28681 ccttcaatgt attccatggt gtagttggta aattatatgg cgccccttta ctagaagcat
    28741 tgatatatgt acctacagga tatcctgaac catcattagc attttcaaca taatatgatg
    28801 aatttgcatt ttgatagtct gatactgatc taggctctgc agctcttgac tcaaccgaac
    28861 gcgtttgaat tctgtttgat cgacggctag tttgttgacg ttgaggcatt gtacgaatta
    28921 aagcaacagc ttgttccaat tctttgtatg caagttgcaa gtctttattg tttattggat
    28981 cattactgcc taataacgta ttaatcttgt caaaaatgcc ttttacatag ttaaatgtgc
    29041 cagaatctgc attttcacgg tcaataaagc gataatcatg ataatttgca tcaaaaaatg
    29101 cttgtaattc atttcggtca tgttgtacgt taccattatc agataaatct gaagctgtta
    29161 ctacatttgc ttcatgattt tctacatgag ccgctctatt gtcgtttcca tttttattag
    29221 cagattgact ttcgttttgt ttatgcttat tttcttcttt atctggttgt gttgtcgcag
    29281 ccgttgccga atctttcttt gtatttacat tttgagatgc tggttgttca tcattagtag
    29341 tagatgattg cgctactttt tgatctacta aattagcttg actaattttt ggttgctcat
    29401 tttcatgagt agcagataat gattgaccat tttgtgaatt ttgagaattt tgtacttgag
    29461 attctcgatt ctcagtctgt tcattattac tttgttgttt ctgtttaacc acacttgctg
    29521 gttgatttgt ttcagcagca tgtgcttgtg atgtattgaa tcctaaaaat accaatgtcg
    29581 caatgacagt tgaaaatgta ccaactgtat atttacgaat actaaacttt tgaattttat
    29641 cacgataatt cacagctatt gttcactcct tatcttgttg ttatgtctct gttgtgttgt
    29701 gaatgtattt acttttgatt gcttgtgtat tgtaatgctc attccattct catttaaaaa
    29761 tttaaaacga tgacgattca atacaatttc gcaatctatc caaaaagtat tgaaaaacat
    29821 tacaactatg tgttgaacaa tttatttatg ctccagaata taataacaca aaatatattg
    29881 taaggtaaat tgaatttgtg acaatttata ataattataa ataaagtagc gtaaaagagt
    29941 aataaaaaac caatccctat gttcatttaa aataatgaca cataagaatc ggtttatatt
    30001 tttgtttaat attgtagcga cttgtatgat ttcaatttaa ttctcaatta tcataattga
    30061 gtgtcgtttt gtttaggcac aagtaacaaa atgataacga atgataaaat tgccattcct
    30121 gcgtttaacc ataatgcaat cattgcacct gtataaatgt ttgtcatatt tgatacgatt
    30181 gcataaactg caccactcaa tgcgacgcca aatgctccac ctaatgcaga agccatttta
    30241 tagatacctg cagcaacgcc tactttttct aacggtgcat ttgcaattgc tgtatctgtt
    30301 gatggtgtag catatattcc tagtcctaaa ccaaagaata aataacctat aatacaacaa
    30361 atgacataca atatttctgg caaaaatgtt aatgaaatga ggcattctcc gacaataaga
    30421 actcctgttc caattaacat tggtttcttg catccgagtg tttgaagtaa cttttcacca
    30481 acacgaatca taattaatac cattactaaa taagtgattg ataaacttcc tgcttgcaat
    30541 gaagaatatc ctaaacctct ttgaacaaat gtgttggcta ctattaatgt tccggcaaca
    30601 ccatttaaca aaaagtttga agctgttgca cctgtgtaag ctttattttt aaataattta
    30661 aaatcgatta aaggatttgt agcacgcttt tcaagaacta taaataaact aaaagatcca
    30721 attgcaattg ctaataaagt gataaaaaga agtgaggtta cacctaattc tgatccttta
    30781 gtaattaaaa tatttaaact gaggagcata atgactaaaa gaaccagacc tttaatgtca
    30841 aatttattta gagaaatcga tttagattta gtttcaggtg tgcctttaat aagaaacagc
    30901 gcaattaatg aaattataat tgataggata aaaatccaac gccaacctaa aagcgttgca
    30961 actgcacctc caaaaaatga acaaacacca gagccgcccc atgagccaat tgaccaataa
    31021 cttaaagcgc gttgtctatc tttcccaatg taatatgact taataataga caaagttgca
    31081 ggcataatac atgctgctga aagtccttga attaatcttc ctataataag taataaagga
    31141 atatttgaaa taatgattaa taatgaaccc aatatattta agataatacc aatgttcgtg
    31201 agtttaattc tgccatattt atcagcaaga ccacctgctc ctactacaaa cattcctgaa
    31261 aataaagcag ttatactaac ggcgatatta accgttccaa tatctgtatt gaaactatct
    31321 tcaagtattg gtacaacatt aaccaatgat tgtgcaaata gccaaaacgt tattacactt
    31381 aaaacaattc ctattaacaa cttattattg ccttcaaatg cctctcttga cggcttttcc
    31441 atctctattt gcctccctat acttttgaaa acagacaaat tccataacag aaatttgtct
    31501 gttcgataga ataattgaat ggtttttgat tttaatgtgt aaaactttaa atttattagt
    31561 agtccatcca tttattctca atgctagtta tcttacctta tgctgctttt tgtttcttct
    31621 tatagtaata aactggtata ccaagtgctg ttattagaat tccaatgatt gctaatataa
    31681 attgtgtaaa cagtgtatta attaatacaa atgatcctgc caaaatagca attaaaggta
    31741 tgatcggata taacggtact ttatatggtc gctccatatt tggctcacgt tttcttaaaa
    31801 ttattaccgc aacaaatgac atacaataga acaaccaaat aacaaagatt aacatatttg
    31861 taatcgtatc aaatgctccc attgacatca tgatgatagc gattataagt tggataattg
    31921 cgccaaacca tggtgcgcca gattttgtta attttgcgaa taagtggcta aatggcaata
    31981 attttctttc agccattgca tatggtacgc gcataccagt catagtatag ccattgatcg
    32041 taccataaac agaaattaat atacctattg taataatctt accgccattt tcaccaaata
    32101 atatttttga tgtatctgaa gctgcattta aattaccagc aagtagttct attggcagtg
    32161 ttaataagaa tgtagcgtta attaataaat acacagccat aatacaaccg ataccaactg
    32221 aaatcgctaa aggtaaatcg cgtttaggat ttttaagttc ccccgcaaca tttcctacat
    32281 gaatccaacc atcatatgca aacatagttg ctaataaacc actaccaatt gctgtaaaga
    32341 aaccatttcc tgaattacct gtagttggaa ttaatgaaaa agtaatatct ccagattgaa
    32401 aaataccaaa aattacgata acgatgattg gaatcagttt aattactaat gtaactgatt
    32461 gtaaaattcc gcctgctttt gaacctagga aatttatcaa cacaatagat aacgctgatg
    32521 cgattgctat cggtattaac gaacctatag ataaatggaa taaattaatt aactgtgtcg
    32581 caaatacgat agacaatgct gctacgttag ctggaaaata aataaatgat tgcgcccaac
    32641 ctgataggaa gccccagaaa tcaccgtatg tatattctat atacttcgtt aagccacctg
    32701 tttcagggat tgcagcagca agttctgctg ctgttaaccc cgcacaaatg gtaatgatgc
    32761 cgcctaggaa ccatacaaac aaggccattc ctgctgttcc tgttacttct gttacgtttg
    32821 atattttaaa gaatactcct gaaccaataa ctgtccccat aacaatagca aacgctgaga
    32881 agaaacctat atttttttgt aattctttac catttgacat aattacacct catttttaag
    32941 attaaatgtt ttaacctacc acacccttgc ttgtatctgc aatattcagt ccatgttcaa
    33001 tgacacctga aactcttgtt aagtcaacat tcccgcctga aactaaagca acaacatttt
    33061 tatcttcaag ccatttattg tttatttttc cacttaaaat tgcagctgtt ggtaatgcgc
    33121 ctgcaccttc agtaataatt ttggcacgct gcattaaatc tttcatagca tgttcaatct
    33181 cttcttctgt aacaagaata aactcatcta ctaaatgttt aactacttca tatgtttgtt
    33241 caccaggaac ttttacatca caaccatctg ctattgtgct atccactcga tgttcagtta
    33301 aatctctctt atagaaagac tcagccatac catgaacatt ctcagattga acaccgataa
    33361 tatgaattga agggttaaat gattttaatg cggtggcaat acctgcaatt aatcctccac
    33421 cgccaactgg tacgatgact gtattcacat tccaaatatc atctaaaatt tctaaaccaa
    33481 ttgttccttg gcctgccatt acaaacttat cgtcatatgg atgaacgatt gtcatgccat
    33541 tttctttcgc taattcttcc atataaagtc tagtttcgtt aaagttttta ccttttaaaa
    33601 taacctttgc cccatagcct ttcgttgctt gttgtttcgc ttgtggtgct gtttcaggca
    33661 ttacgatagt tgcatcaatg cctaataatt tagctgttaa agctacacct tgtgcatggt
    33721 tcccagcaga tgctgcgata atgccttttt ctttttgttc atctgttaag tgattaattt
    33781 tattgctagc gcctctaaat ttaaaagatc ctgtgaattg catattttct aattttagaa
    33841 atacattccc tttagttata ctttggctta aatacattga tttaattaga ggtgttcgac
    33901 gaataaatgg tttaatgctt gctttagctt cttcgatatc tcctaaactt acaatatgtg
    33961 ctgtttgtaa tgtaactgtg ttggttgtca taataattac atccttccgt tttgtaaatt
    34021 tttagtccaa acaataatgc tatatttaaa atattcattt cactcaattt catttaaatt
    34081 actatctatt cgataacatt taatatttct ttataatcta ggtcatgtga tgtagctaat
    34141 ccttgatttg tcacttgtcc ttggtaaatg tttacaccag tacttaatgc ttcattatct
    34201 ttaattgctt gttctaagcc tttgtcacaa atttctaata tataatcaat atttccttgt
    34261 gctaatgcca ttgttgaagt tcttgggact gctcctggtt gatttggtac accataatga
    34321 atcacacctt cttcttcata cactggatca gaaattgtag ttggtctaat tgtttcaata
    34381 gttccacctt ggtcaatagc tatatcgatt aatactgaac cttttttcat tgatttaacc
    34441 atctcacgag taaccaattt tggcggtttc gcacctggaa ttaaaattgt agaaataaat
    34501 acatctgctt ttttaatttg ttctgctaaa ttttctggtg ttgatttgac tactgttaca
    34561 tctttttctg catacatatc ttcaagacat ttaatgcggt catcgtttaa ctcgataatg
    34621 attactttag catttagtcc caaggcaaca tttgctgcat ttgttgctgc tactccacca
    34681 ccgaaaatca catatgtact accaggtata tccacatttt catgtacacc agtcactaat
    34741 gtaccttgac caccatgttg tgcttcagag tagtaagctc ccataattgc tgagcgttga
    34801 cctgctatag cactcattgg cgctaataat tctgcttttc cattttttat aatggtttca
    34861 ccactaatcg cagttacacc aacttcttgc attttttcta ctatttcttt tgaagatgct
    34921 agatgtaaaa atccccatat aatttgattc tttttgaaat attgatattc gctttcatga
    34981 ggttctttta ctttgataac aagatctgct tcccatgctt gttcgtgagt tacgatctta
    35041 gcgccttctt tttcatacat atcgttagaa aatcctgaac caatgccagc atttttttca
    35101 acaattactt tatgtcctgc atccgttaac ttacgcacat tttcgggtgt gcaagctaca
    35161 cgtccttcac cttgttttaa ttctttgact actgcaacta acatttgcaa cactcctctt
    35221 tcgtttgtga ataatttcac aattatttta tc
//
LOCUS       DALMNS010000013        35112 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.013, whole genome shotgun sequence.
ACCESSION   DALMNS010000013 DALMNS010000000
VERSION     DALMNS010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 35112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35112
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.013"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            561..2009
                     /locus_tag="O6Y56_000529"
     CDS             561..2009
                     /locus_tag="O6Y56_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDB5573820.1"
                     /translation="MGSFFNKIARKEDPAIYQNKDGHLKRTLRVRDFLALGVGTIIST
                     SIFTLPGIVAAQHAGPAVALSFLLAAIVAGLVAFTYAEMAAAMPFAGSAYSWVNVLFG
                     EFFGWVAGWALLAEYFIAVAFVASGFSANLRGLVKPIGIELPAALSNPFGTNGGFIDI
                     IAAIVILLTALLLSRGMSEAARMENILVILKVLAIILFVIVGLTAINVSNYVPFIPEH
                     KVTATGDFGGWQGIYAGVSMIFLAYIGFDSIAANSAEALDPQKTMPRGILGSLSVAIV
                     LFIAVALVLVGMFHYSQYANNAEPVGWALRQSGHGVVAAIVQAISVIGMFTALIGMML
                     AGSRLLYSFGRDGLLPSWLSHLNDKHLPNRALVILTIIGVLIGSMFPFAFLAQLISAG
                     TLVAFMFVSLAMYRLRKREGKDLPIPAFKLPLYPVLPAVTFVLVLLVFWGLGFEAKLY
                     TLIWFIVGIILYLSYGLRHSKKNDVAEYHPPK"
     gene            complement(2089..3426)
                     /locus_tag="O6Y56_000530"
     CDS             complement(2089..3426)
                     /locus_tag="O6Y56_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HDB5573821.1"
                     /translation="MSKAHQLIQEDEHYFAKPGRIKYYPLVIDHGYGATLVDIEGKTY
                     IDLLSSASSQNVGHAPREVTEAIKAQVDKFIHYTPAYMYHEPLVRLAKKLCEIAPGDF
                     EKRVTFGLTGSDANDGIIKFARAYTGRPYIISFTNAYHGSTFGSLSMSAISLNMRKHY
                     GPLLNGFYHIPFPDKYRGMYEQPQANSVEEYLAPLKEMFAKYVPADEVACIVIETIQG
                     DGGLLEPVPGYFEALEKICREHGILIAVDDIQQGFGRTGTWSSVSHFNFTPDLITFGK
                     SLAGGMPMSAIVGRKEIMNCLEAPAHLFTTGANPVSCEAALATIQMIEDQSLLQASAE
                     KGEYVRKRMDQWVSKYNSVGDVRGKGLSIGIDIVSDKNLKTRDAIAALKICNYCFEHG
                     VVIIAVAGNVLRFQPPLVITYEQLDTALNTIEDALTALEAGNLDQYDISGQGW"
     gene            3680..4096
                     /locus_tag="O6Y56_000531"
     CDS             3680..4096
                     /locus_tag="O6Y56_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573822.1"
                     /translation="MRLKVLFHFIAAIFISFMLLWMTMLFDLISNQSHLKALLLNLDF
                     LIPSDNTPYILEIICHLLIGSVIYFVFVLLFHTSKRLYYLCYIPLVFLFIALYPFLVF
                     IAQRPIFQFSVTELIGWIITHIFFMSLMALVIPRIK"
     gene            4219..5109
                     /locus_tag="O6Y56_000532"
     CDS             4219..5109
                     /locus_tag="O6Y56_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002478556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose bisphosphate aldolase"
                     /protein_id="HDB5573823.1"
                     /translation="MNKEQLEKMKNGKGFIAALDQSGGSTPKALKEYGVNEDQYSNED
                     EMFQLVHDMRTRVVTSPSFSPDKILGAILFEQTMDREVEGKYTADYLADKGVVPFLKV
                     DKGLAEEQNGVQLMKPIDNLDSLLDRANERHIFGTKMRSNILELNEQGIKDVVEQQFE
                     VAKQIIAKGLVPIIEPEVNINAKDKAEIEKVLKAELKKGLDSLNADQLVMLKLTIPTE
                     ANLYKDLAEHPNVVRIVVLSGGYSREKANELLKDNAELIASFSRALASDLRAGQSKEE
                     FDKALGDAVESIYDASVNKN"
     gene            complement(5304..6800)
                     /gene="mqo"
                     /locus_tag="O6Y56_000533"
     CDS             complement(5304..6800)
                     /gene="mqo"
                     /locus_tag="O6Y56_000533"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HDB5573824.1"
                     /translation="MAKSNSKDIVLIGAGVLSTTFGSMLKEIEPDWNIHVYERLDRPA
                     IESSNERNNAGTGHAALCELNYTVLQPDGSIDIEKAKVINEEFEISKQFWGHLVKSGS
                     IENPREFINPLPHISYVRGKNNVKFLKDRYEAMKAFPMFDNIEYTEDIEVMKKWIPLM
                     MKGREDNPGIMAASKIDEGTDVNFGELTRKMAKSIEAHPNATVQFNHEVVDFEQLSNG
                     QWEVTVKNRLTGEKFKQVTDYVFIGAGGGAIPLLQKTGIPESKHLGGFPISGQFLACT
                     NPQVIEQHDAKVYGKEPPGTPPMTVPHLDTRYIDGQRTLLFGPFANVGPKFLKNGSNL
                     DLFKSVKTYNITTLLAAAVKNLPLIKYSFDQVIMTKEGCMNHLRTFYPEARNEDWQLY
                     TAGKRVQVIKDTPEHGKGFIQFGTEVVNSQDHTVIALLGESPGASTSVSVALEVLERN
                     FPEYKTEWAPKIKKMIPSYGESLIEDEKLMRKIRKQTSKDLELGYYEN"
     gene            7096..7425
                     /locus_tag="O6Y56_000534"
     CDS             7096..7425
                     /locus_tag="O6Y56_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573825.1"
                     /translation="MTYSILNIYSILIQYKCKINHKKEIQYMHLRKSLQLPLILKFIL
                     NLALIGIVIIVLTHTEFQLNVGDSNVFLLNWDIRGLTSYIFSFLILVALVSKLILIFI
                     TRRQRTS"
     gene            complement(7485..9083)
                     /locus_tag="O6Y56_000535"
     CDS             complement(7485..9083)
                     /locus_tag="O6Y56_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HDB5573826.1"
                     /translation="MQKSALFAPEKYNIISEIEKYSHIPDKKAILYHNTEGEDISVTY
                     QQLIEQSNKVGNVLASHGLSKGDKVLIMMPRSIATYELYIAALKLGVAIIPCSEMLRT
                     KDLQYRITHGEINAVIALEPFTVEFEKIKEYDALTKFVIAGQKDGWISLEAEKENASN
                     KLEMADTTRDDMAILSYTSGTTGNPKAVTHCHGWGFAHLQMAPKHWLCINEDDLVWAT
                     AAPGWQKWVWSPFLSVLGSGATAFVFNGRFSPETYLELLQKYQINVLCCTPTEYRMMA
                     KLQNLNDYDLTHLHSAVSAGEPLNREVVEQFKKYFNLTVRDGYGQTESTLLIGFLKDT
                     PQRIGSMGKGIPGSSVTVVDDEGNSVPANTKGNIAVPLDLPALFKGYYKEPERTAKAQ
                     TGKYYITGDLAHVDDDGYFWFEGRRDDIIISSGYTIGPFEVEDALTNHPAVKECAVVA
                     KPHDIRGNIVKAFVILQDHTAGDDTLVKELQQFVKNEVAPYKYPREIEFVDDLPKTNS
                     GKIRRVELRDAEIEKWQQQKDSNQ"
     gene            complement(9277..9720)
                     /locus_tag="O6Y56_000536"
     CDS             complement(9277..9720)
                     /locus_tag="O6Y56_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HDB5573827.1"
                     /translation="MNIYDEYRSYVIEELDDCLTIQKNNDTAYYDVLEAINDLSNDSL
                     CVLNHLYINEGQEETFEQKFLQRNKHLKNVDGFKALRFLRPRTAGRHYIIITLWENRQ
                     AFYHWQNSTEYKHTHKHRGTSKGADVKIINRELSYNIRIELADMV"
     gene            complement(10000..10212)
                     /locus_tag="O6Y56_000537"
     CDS             complement(10000..10212)
                     /locus_tag="O6Y56_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sterile alpha motif-like domain-containing
                     protein"
                     /protein_id="HDB5573828.1"
                     /translation="MSFYEYIQTFKDDKTPLGELAIWIKEDDSFPKQEKLTENILSYF
                     HQMSNIDHEFLEIVKRSLSLYDQLKS"
     gene            complement(10492..12201)
                     /gene="betA"
                     /locus_tag="O6Y56_000538"
     CDS             complement(10492..12201)
                     /gene="betA"
                     /locus_tag="O6Y56_000538"
                     /EC_number="1.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HDB5573829.1"
                     /translation="MSNKNKSYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDY
                     FWDLFIQMPAALMFPSGNKFYDWIYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQ
                     RGNPMDYEGWAEPEGMETWDFAHCLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPAT
                     NPLFQSFFDAGVEAGYHKTPDVNGFRQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKN
                     LTVETRAFVTEIHYEGRRATGVTYKKNGKLHTIDANEVILSGGAFNTPQLLQLSGIGD
                     SEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKCKEPVSLQPSLDIKRMPFIGLQWIF
                     TRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMY
                     SNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEI
                     SPGPEVQTDEEILDWVRRDGETALHPSCSAKMGPASDPMAVVDPLTMKVHGMENLRVV
                     DASAMPRTTNGNIHAPVLMLAEKAADIIRGRKPLEPQYIDYYKHGVHDENEGAIEVKP
                     YAK"
     gene            complement(12462..13952)
                     /gene="betB"
                     /locus_tag="O6Y56_000539"
     CDS             complement(12462..13952)
                     /gene="betB"
                     /locus_tag="O6Y56_000539"
                     /EC_number="1.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="betaine-aldehyde dehydrogenase"
                     /protein_id="HDB5573830.1"
                     /translation="MELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGT
                     KEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTL
                     EESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPL
                     LQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGD
                     VMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQ
                     ALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVIST
                     EHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVF
                     GPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY
                     FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLVNWFSK"
     gene            14021..14116
                     /locus_tag="O6Y56_000540"
     CDS             14021..14116
                     /locus_tag="O6Y56_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573831.1"
                     /translation="MKNVSIYKTTQELSFVDSLDFYLTKHLTLML"
     gene            14205..14768
                     /locus_tag="O6Y56_000541"
     CDS             14205..14768
                     /locus_tag="O6Y56_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GbsR/MarR family transcriptional regulator"
                     /protein_id="HDB5573832.1"
                     /translation="MTRSQNKQQQLEQAKDIVINSIGQTMDLYGTNRSVGNLYGTMVF
                     EGSMTLDEMRHQLQMSKPSMSAGVKKLQEFDIVKQQFTRGSRKQHFIAEKDFFIFFRN
                     FFTKKFQREIDINVEAVKDAQAIINPLLESSDLTEAETQEAQKIKVQLDHTHVYYEWL
                     EQLTEAIESGEIFKYFPIPEQPSDSEN"
     gene            complement(14938..16560)
                     /locus_tag="O6Y56_000542"
     CDS             complement(14938..16560)
                     /locus_tag="O6Y56_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501390.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDB5573833.1"
                     /translation="MKKEKVMDWTTFIGTVAVLLFAVIPMMAFPKASEDIITGINSAI
                     SDSIGSIYLFMGLAIFCFVMYIAFGKYGNVTLGKASDKPEFNTFTWAAMLFCAGIGSD
                     ILYWGVIEWAFYYQVPPNGAKSMSDEALQYATQYGMFHWGPIAWAIYVLPALPIGYLV
                     FVKKQPVYKISQACRPILKGQTDKFVGKVVDILFIFGLLGGAATSLALGVPLISAGIE
                     RLTGLDGKNMILRSAILLTITVIFAISSYTGLKKGIQKLSDINVWLSFVLLAFIFIIG
                     PTVFIMETTVTGFGNMLRDFFHMATWLEPFGGIKGRKETNFPQDWTIFYWSWWLVYAP
                     FIGLFIARISKGRRLKEVVLGTIIYGTLGCVLFFGIFGNYAVYLQISGQFNVTQYLNT
                     HGTEATIIEVVHHLPFPSLMIVLFLVSAFLFLATTFDSGSYILAAASQKKVVGEPLRA
                     NRLFWAFALCLLPFSLMLVGGERALEVLKTASILASVPLIVIFIFMMISFLIILGRDR
                     IKLETRAEKLKEVERRSLRIVQVSEEEQDDNL"
     gene            16692..16853
                     /locus_tag="O6Y56_000543"
     CDS             16692..16853
                     /locus_tag="O6Y56_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573834.1"
                     /translation="MAIIEYLYNFSRNKQNFNSAKTAVLSYDLTNLTNFTRTAFKNIY
                     TFLTNIYLL"
     gene            complement(16869..16979)
                     /locus_tag="O6Y56_000544"
     CDS             complement(16869..16979)
                     /locus_tag="O6Y56_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573835.1"
                     /translation="MIEYDLTIILILILKVAYPFFKKVESEKWDFSGKEV"
     gene            complement(17079..17615)
                     /gene="nrdG"
                     /locus_tag="O6Y56_000545"
     CDS             complement(17079..17615)
                     /gene="nrdG"
                     /locus_tag="O6Y56_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HDB5573836.1"
                     /translation="MTLLDIKQGQGYIAKIESNSFVDGEGVRCSVYVSGCPFNCVGCY
                     NKASQKFRYGEKYTDEILAEILDDCDHDYISGLSLLGGEPFCNLDITLNLVKAFRARF
                     GNTKTIWVWTGFLYEYLANDCTERRELLSYIDVLVDGLFIQHLFKPDLPYKGSLNQRI
                     IDVQQSLSHARMIEYIVS"
     gene            complement(17612..19462)
                     /gene="nrdD"
                     /locus_tag="O6Y56_000546"
     CDS             complement(17612..19462)
                     /gene="nrdD"
                     /locus_tag="O6Y56_000546"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HDB5573837.1"
                     /translation="MNQIEEALTGLISKDPAIVNENANKDSDTFSTMRDLTAGIVSKS
                     YALNHLLPKHVADAHQRGDIHFHDLDYHPFQPLTNCCLIDAKNMLHNGFEIGNANVTS
                     PKSIQTASAQLVQIIANVSSSQYGGCTVDRVDELLSTYARHNEEQHRNIAKQFVKESE
                     IDRYVDQQVTKDINDAIESLEYEINTLYTSNGQTPFVTLGFGLGTDHLSRKIQQAILN
                     TRIKGLGKDRTTAIFPKLVFSIKKGTNFSPQDPNYDIKQLALKCSTKRMYPDILNYDK
                     LVEILGDFKAPMGCRSFLPSWKDAEGHFENNGRCNLGVVTLNLPRMALESAGNMTKFW
                     EIFYERIDVLHDALLYRINRLKDAVPNNAPILYKSGAFNYKLKETDDVAELFKNKRAT
                     ISMGYIGLYETATVFYGPDWETSQEAKAFTLEILKEMKRYQMKWTELYDIWFSIYSTP
                     SESLTDRFCRLDQERFGDIKDITDKGYYQNSFHYDVRKDVTPFEKLDFEKDYPYYASG
                     GFIHYCEYPKLQHNLKALEAVWDYSYDKVGYLGTNIPIDHCYECDYDGDFEATEKGFK
                     CPNCGNDNPKTVDVVKRTCGYLGNPVQRPVIKGRHKEICARVKHMKAPKE"
     gene            complement(19710..21080)
                     /locus_tag="O6Y56_000547"
     CDS             complement(19710..21080)
                     /locus_tag="O6Y56_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HDB5573838.1"
                     /translation="MSSDNLWLTVMGLIIIISIVGLLIAKKINPVVGMTIIPCLGAMI
                     LGYSVTDLVGFFAKGLDQVINVVIMFIFAIIFFGIMNDSGLFKPLVKRLILMTRGNVV
                     IVCAMTALIGTIAQLDGAGAVTFLLSIPALLPLYKALNMNKYLLILLLALSAAIMNMV
                     PWGGPMARVAAVLKAKSVNELWYGLIPIQIIGFILVMLFAVYLGFKEQKRIKKAIASN
                     ELPQTQDIDVHKLVEVYERDQDVRFPVKGRARTKPWIKWVNTALTLAVILAMLINIAP
                     PEFAFMIGVSLALVINFKSVDEQMERLRAHAPNALMMAAVIIAAGMFLGVLNETGMLK
                     AIATNLIKVIPAEVGPYLHIIVGLLGVPLDLLTSTDAYYFAVLPIVEQTAGQFGVPSV
                     STAYSMVIGNIIGTFVSPFSPALWLAIGLAEANMGTYIKYAFFWIWGFAIVMLVIAML
                     MGIVTI"
     gene            complement(21556..22161)
                     /locus_tag="O6Y56_000548"
     CDS             complement(21556..22161)
                     /locus_tag="O6Y56_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HDB5573839.1"
                     /translation="MNMPLMIDLTNKNVIIVGGGVVASRRAQTLSQYIEHIMVISPEI
                     TEKLQNMVDKGVVIWKEKEFEPSDIVDAYLVIAATNEPRVNEAVKQALPEHALFNNVG
                     DASNGNVVFPSALHRDKLTISVSTDGASPKLTKSIMAELEALYPPSYSSYIDFLYTCR
                     QKIKVLDMNHSEKQQLLSQIVTKEFLNDTKQAQFLAWLDKK"
     gene            complement(22224..24104)
                     /locus_tag="O6Y56_000549"
     CDS             complement(22224..24104)
                     /locus_tag="O6Y56_000549"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HDB5573840.1"
                     /translation="MKLNTSNSPFTEKQVTEINNLLQTLTESQQQWLSGFLLANSNDT
                     TSDSNQQQLETEVWQQSQISEEQATSTTYMLQNKEPHIEANQRHVTVLYGSESGNAMR
                     LAEIFSERLSDIGHQVVLMSMDEYDTTNIAQLEDLFIITSTHGEGEPPDNAWDFFEFL
                     EDDNAPNLNHVRYSVLALGDQTYEFFCQAGKDVDALLENLGAERICKRVDCDIDYEED
                     AEKWMADIINIIDTTSEGIQSESVISESIKSAKEKKYSKSNPYQAEVLANINLNGTDS
                     NKETRHIEFLLDDFSESYEPGDCIVALPQNDPELVEKLISMLGWDPQSPVPINDHGDT
                     VPIVEALTSHFEFTKLTLPLLKNADIYFDNEELSERIQDESWAREYVINRDFIDLITD
                     FPTIELQPENMYQILRKLPPREYSISSSFMATPDEVHITVGTVRYQAHGRERKGVCSV
                     HFAERIKPGDIVPIYLKKNPNFKFPMKQDIPVIMIGPGTGIAPFRAYLQEREELGMTG
                     KTWLFFGDQHRSSDFLYEEEIEEWLENGNLTRVDLAFSRDQEHKEYVQHRIMEESERF
                     NEWIEQGAAIYICGDEKCMAKDVHQAIKDVLVKERHISQEEAELLLRQMKQQQRYQRD
                     VY"
     gene            24299..24391
                     /locus_tag="O6Y56_000550"
     CDS             24299..24391
                     /locus_tag="O6Y56_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573841.1"
                     /translation="MSVINAYSNASLLFFIYLLFIMYQISLSVK"
     gene            complement(24499..24996)
                     /locus_tag="O6Y56_000551"
     CDS             complement(24499..24996)
                     /locus_tag="O6Y56_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HDB5573842.1"
                     /translation="MNNRNVYDIEVSDYKGLTYKLEAFRGKVILVVNTATECIYSEQL
                     KKLETLFQKYKDRGFVVLSFPNNNFDNRQPGSNEEILKISREKFGVTFPVLAKISVNG
                     NDEHPLFTHLKNEQPGIFGSPIKWNFTKFIIDRQGNVVNRFLPMEDPLDISTNIEILL
                     QESSS"
     gene            complement(25006..25266)
                     /locus_tag="O6Y56_000552"
     CDS             complement(25006..25266)
                     /locus_tag="O6Y56_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573843.1"
                     /translation="MIIMRGYNERYCSWTNTAIQCDYFNKVRQVKKDGKSDRLSNNIN
                     SNIIYRVLEKCITLYNVCSRYKRALILSEHSKKNIFNIKKAV"
     gene            complement(25648..25761)
                     /locus_tag="O6Y56_000553"
     CDS             complement(25648..25761)
                     /locus_tag="O6Y56_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573844.1"
                     /translation="MIGILIKCLNIGGQYYLQTRMLSNEDNAEKTISGNSI"
     gene            complement(26430..28430)
                     /locus_tag="O6Y56_000554"
     CDS             complement(26430..28430)
                     /locus_tag="O6Y56_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5573845.1"
                     /translation="MKLRLLWHIMRRQFITQRLVIIPFILAVSVLFMIEYTLVSIGLN
                     SYIKQKNDFLVPFIIIANFFMALLTFIFIFYANHFMMSQRRKEFSIFMTLGMTKKSMR
                     LIVVMETILQFIIISVVSIAGGYLLGAIFFLFIQKIMGIEVATLRYYPFDSVAMFITL
                     IIIAVLMGMLLIFNLFSINFQRPITYQHRSDSSVISRWLRYVLIVIGSAALYLGYFIA
                     LQQDTTFGAFFKIWIVIGLVIIGTYAFFVGISEIIISILQQASKVYYHPRYFFVVVGM
                     RVRLKMNAVSLATITLLCTFLIVTLTMTLTTYRDMNHTIMKLITNDYDLSFNDNSKSH
                     IERQQTIENIKRDIQGSVNAKDFKVYETTLFRASLEKNRAYYKLKQASDDIPIDFIGN
                     EGSIFSKQSVMITALTVQDYNRYHQNKLHLDNQSIGMITNVPIFKKQSKVGLNNEVFK
                     VKQLDAHALNLMMIQDSMVLIVKDNNQLQKVKGFYAHEQKKSTISINFNVSGKTKLTT
                     SQIQKLSKKYDASINSKSEMLMVWDRLTGGLIFVGGVVSIVLVIGIFLMMYYKQVSEA
                     YANQHNYDIMKKLGLDNGRIAKITRNQMTFLFAIPITVALIHTLISSNIVYTLLNMIG
                     INNHHIFLTSYVLTVIIISFLYMAMYKITSYIYAKVIHQQRN"
     gene            complement(28427..29182)
                     /locus_tag="O6Y56_000555"
     CDS             complement(28427..29182)
                     /locus_tag="O6Y56_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5573846.1"
                     /translation="MLLEVKHVKKVYGKGLNATTALNQMNLSVGAGEFVAIMGESGSG
                     KSTLLNLIASFDGLTEGDIIVDGTHLNNMKNKSKALYRQQMVGFVFQDFNLLPTMTNK
                     ENIMMPLILAGAKRKDIEQRVHQLTVQLHLEGFLNKYPSEISGGQKQRIAIARALVTK
                     PTILLADEPTGALDSKTSKALMMLFQEIHQLEQTILMVTHSNIDASYAERVIFIKDGR
                     LYHEIYRGEESQLAFQQRITDSLALVNGGSVNI"
     gene            complement(29290..30177)
                     /gene="nsaS"
                     /locus_tag="O6Y56_000556"
     CDS             complement(29290..30177)
                     /gene="nsaS"
                     /locus_tag="O6Y56_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nisin susceptibility-associated two-component
                     system sensor histidine kinase NsaS"
                     /protein_id="HDB5573847.1"
                     /translation="MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILL
                     LLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNEQIEYKNDVESYFLTWVHQMKTP
                     ITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
                     PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFD
                     EQSNQLYVKDNGVGISEADLPKIFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPV
                     SVVSKQNEGTTFTIQFPDE"
     gene            complement(30188..30853)
                     /gene="nsaR"
                     /locus_tag="O6Y56_000557"
     CDS             complement(30188..30853)
                     /gene="nsaR"
                     /locus_tag="O6Y56_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nisin susceptibility-associated two-component
                     system response regulator NsaR"
                     /protein_id="HDB5573848.1"
                     /translation="MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQ
                     PQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSRIDNMDQIMAIQMGGDDFIEKPF
                     NLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQEQSIQLSLTELQILK
                     LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVG
                     YKV"
     gene            complement(30879..31079)
                     /locus_tag="O6Y56_000558"
     CDS             complement(30879..31079)
                     /locus_tag="O6Y56_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573849.1"
                     /translation="MILVMLSPLLIIFFIVLSILEERKRTKKKQLEKEKANTLNQNTN
                     DTESSNQEPSLQQAKEQKDDKG"
     gene            31277..32701
                     /locus_tag="O6Y56_000559"
     CDS             31277..32701
                     /locus_tag="O6Y56_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HDB5573850.1"
                     /translation="MLSVKKATKFAVANLIIVSTVFSSVTPAIAQSDKSSKDESFAVG
                     NTKNPKNVIFLVGDGMGPSFNTAYRYYKNDPHAKEMTPTAFDSYLKGTNRTYSNDPKQ
                     NITDSAAGGTAFSSGHKTYNGAIGVDSNKQKVKTVLERAKEKGKSTGLVSTAELTDAT
                     PAAYAAHVTSRDDKNEIAKQFYKDKINGKHKVDVLLGGGAKYFGKSNGNLDKKFKKDG
                     YDLATNSKELSKSDKDKVLGLFADKNMPLAIDASKDEPSLADMQQSALNKLERNKKGF
                     FLMVEGASIDKSAHSNDITGVMSEMEGFEKAFDDAIQYAKKHKDTLVVATADHSTGGL
                     TIGKDKGYEWNPQPIKSMKHSGSYMTEKMAKGEDPEKVINEGYGFEFSQDDMKKVKKE
                     NKKLKRLLKKEKDEKSAEVEKQTKALQHAIQKPVNDKSYTGWTSDGHTGEDVNTYAYG
                     PRSESFSGNIENTESAKIIFDIFK"
     gene            32771..32881
                     /locus_tag="O6Y56_000560"
     CDS             32771..32881
                     /locus_tag="O6Y56_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573851.1"
                     /translation="MLGAWLTRSWYFLNAKYKPPTNVKITANFFIIQTPF"
     gene            complement(32984..33439)
                     /locus_tag="O6Y56_000561"
     CDS             complement(32984..33439)
                     /locus_tag="O6Y56_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDB5573852.1"
                     /translation="MSTNKNDYEHMLFYFAYKTFITTADEIIEKYGMSRQHHRFLFFI
                     NKLPGITIKSLLEILEISKQGSHATLQKLKEQGLIIEKILETDRRVKKLYSTDKGNQL
                     IAELNKAQDELLQNIYQQVGSDWYDVMEALAKGRPGFDFIKHLKDEKES"
     gene            complement(33684..34445)
                     /locus_tag="O6Y56_000562"
     CDS             complement(33684..34445)
                     /locus_tag="O6Y56_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HDB5573853.1"
                     /translation="MAYISLNYHSPTIGMHQNLTVILPEDQSFFNNDTTAKPLKTLML
                     LHGLSSDETTYMRYTSIERYANEHKLAVIMPNVDHSAYANMAYGHSYYDYILEVYDYV
                     HQIFPLSKKRDDNFIAGHSMGGYGTIKFALTQGDKFAKAVPLSAVFEAQNLMDLEWND
                     FSKEAIIGNLSSVKGTEHDPYYLLDKAVAEDKQIPKLLIMCGKQDFLYQDNLDFIDYL
                     SRKNVPYQFEDGPGDHDYAYWDQAIKRAITWMVND"
     gene            complement(34561..>35112)
                     /locus_tag="O6Y56_000563"
     CDS             complement(34561..>35112)
                     /locus_tag="O6Y56_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HDB5573854.1"
                     /translation="DSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDS
                     DSESDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
                     DSDSDSDSRVTPPNNEQKAPSNPKGEVNHSNKASKQHKTDALPETGDKSENTNATLFG
                     AMMALLGSLLLFRKRKQDHKEKA"
BASE COUNT        11109 a         6420 c         5252 g        12331 t
ORIGIN      
        1 actgagatgt aagcggagtc aaattacact ctaacgccaa taaatattga tatctcaagc
       61 tttagcacgt aatttgaaat ttgtgacaat ttttagcatt ctaaaattgc gtaatgacgc
      121 tatttaaagg ctttaacaaa ctattgagct ttctattttt ttcattttaa aaaggatggc
      181 tattcgactt aaatgactta ctatataacc tcctattttc cgccttaccc tcatcatatt
      241 tgatgcatct ttttatagtc aaagaattac atttcataca aattagccaa tcagacataa
      301 acatgaaatt gattttaaaa atataatgcg caaaattgtt agaaaattag caaaaaatag
      361 tacttattca tttaatatct gttataatca gttttatcat ttaaaaaatc tatggatgtt
      421 atcaagacaa gtcattaata cgtaatataa agttgtgatt tttcagaatt tttagacaaa
      481 atattgatta tttgtgctat gatataacat attaaaaaac accgtataga attgtttatg
      541 aatgtttggg aggaaagttt atgggaagtt ttttcaataa aatagcacga aaagaggatc
      601 cggctatcta tcaaaataaa gatggtcatt taaagcgtac actacgggtg cgtgatttct
      661 tagctttagg tgtaggaaca attatatcga catctatctt tacgctacct ggcattgttg
      721 ctgcacaaca tgcaggaccg gccgttgcgt tatcattctt actcgctgct attgttgctg
      781 gtttagttgc atttacttat gcagaaatgg ctgccgctat gccatttgca ggttcagcct
      841 attcttgggt caatgtatta tttggtgaat tttttggatg ggttgccggt tgggctctat
      901 tagctgaata ttttatcgcc gtagcctttg ttgcatcagg attctcagcg aatttacgcg
      961 gacttgtgaa accaattggc atcgaattac ctgcagcatt atcaaatcca tttggtacca
     1021 atggcggttt tatcgatatt attgctgcta tcgttatttt attaactgca ttattactat
     1081 cacgtggtat gtcagaagca gcacgtatgg aaaacatttt agttatttta aaagtattag
     1141 ctattatttt atttgtaatc gtaggtttaa cagcaataaa tgttagtaac tatgtgccat
     1201 ttattccaga acacaaagta actgctacag gtgactttgg tggatggcaa ggcatatatg
     1261 ctggtgtttc aatgattttc ttagcgtata tcggtttcga ttctatcgca gcaaactcag
     1321 cagaagcact tgaccctcaa aagacaatgc ctagaggtat tcttggttct ttaagtgttg
     1381 ctatcgtatt atttattgct gtagcactag tgttagttgg tatgttccat tactcacaat
     1441 acgcaaacaa tgctgaacct gttggttggg ctttacgtca aagtggtcat ggtgttgtag
     1501 cagctattgt tcaagctatc tctgttatcg gtatgtttac agcattaatt ggtatgatgt
     1561 tagcaggctc acgtttactt tattcatttg gacgtgacgg cttattacct tcatggttaa
     1621 gccacttaaa cgacaaacat ttacctaatc gcgcactagt tatacttact attattggtg
     1681 ttttaattgg ttctatgttc ccattcgcat ttttagcaca attaatttca gccggtacac
     1741 ttgttgcatt tatgttcgtt tcattagcaa tgtatcgttt gagaaagcgt gaaggtaaag
     1801 atctaccaat tcctgcattt aaattacctt tatatcctgt gttaccagca gttacatttg
     1861 ttttagtatt gctagtattc tggggattag gattcgaagc gaaattatac actttaattt
     1921 ggtttattgt tggtatcatt ctatatttaa gttatggact tagacattct aagaaaaatg
     1981 acgtagctga ataccaccca ccaaaataaa aattaaaaaa atcatttccc atctgattaa
     2041 catccagatg tggaaatgat tttttatttt atattaagat aatcgctatt accaaccttg
     2101 tccagatatg tcatattgat ctaagtttcc tgcttccaaa gcagtcagtg catcttctat
     2161 agtgtttaac gccgtgtcta attgctcata tgttattacc aatggcggtt ggaatcgcaa
     2221 cacatttcca gctacagcta taataactac gccatgctca aagcagtaat tacatatttt
     2281 aagtgccgca atagcatcac gtgttttgag gtttttgtca gaaacaatat caataccaat
     2341 actcagacct ttacctctaa catcgcctac actattgtat ttagataccc attgatccat
     2401 tcgtttccta acatattccc ctttttccgc actagcctga agaagcgact gatcttcaat
     2461 catttgaatt gtggctaatg cagcttcaca actaactgga ttagcacctg ttgtaaataa
     2521 atgtgctggt gcttctaaac aattcataat ctctttgcgt ccaacaattg ctgacatagg
     2581 cataccacct gctaaggatt ttccaaaagt gattaaatca ggcgtaaaat taaaatgcga
     2641 gactgaactc catgtacctg ttctcccaaa accttgttga atatcatcga cagcgattaa
     2701 aataccatgt tcacgacaaa tcttttctaa cgcttcaaaa taccctggaa ctggttctaa
     2761 aagtccacca tcgccttgta tcgtttcaat aacaatacat gctacttcgt cagcaggtac
     2821 atatttcgca aacatttctt ttaagggtgc taaatattct tctactgaat tagcttgtgg
     2881 ctgctcgtac ataccacgat atttatctgg aaacggaata tgataaaaac cattcaataa
     2941 cggaccataa tgtttgcgca tatttaaact aatagctgac atagacaatg agccaaaagt
     3001 tgaaccatga tatgcattag tgaaactaat gatataagga cgccctgtat atgctctggc
     3061 aaatttaatg atgccatcat ttgcgtctga tccagttaat ccgaaggtca ctcttttttc
     3121 aaaatctcca ggtgcaatct cacaaagctt cttagctaaa cgtaccaacg gttcatgata
     3181 catatatgct ggtgtataat gaataaattt atcaacttgt gcctttatcg cttctgttac
     3241 ttctctaggt gcatgaccta cgttttgaga actcgcactc gataacaaat cgatatatgt
     3301 cttcccctca atatcaacca atgttgctcc atatccatga tcaataacta acggataata
     3361 tttaatacgt cctggtttcg caaaataatg ttcatcctct tgaattaatt gatgtgcttt
     3421 actcatatac attcccctcc cattgacaga ccttattcac ataattacct tccctatatc
     3481 gataaccaca ttcgatttga tatcacgtga aaataccgtc atgcctctat gaatactatc
     3541 caatatacta ataaaattca gatttgtaaa tatattctga taattaagaa ttttatatca
     3601 atctactttg tttatgcgca taattttgtt cgattaggga attgtttact atattccatt
     3661 tgactctgag gtgatacgaa tgcgtttaaa agtattgttc catttcattg ctgctatttt
     3721 catatcattc atgttgctat ggatgaccat gttgtttgac ttaataagca atcaatcaca
     3781 tttaaaagct ttattattga atttagattt tctaattcct tctgacaata caccatatat
     3841 tctagaaata atatgtcact tactaattgg tagcgtcatt tattttgtat ttgtgttgct
     3901 gtttcatact tctaaaaggc tttactatct atgttatatc cctttagttt tcttatttat
     3961 agcattgtat ccctttttag tatttattgc gcaacgtcca atttttcaat ttagtgtgac
     4021 agaattaatc ggttggatta ttacacatat tttctttatg tcattaatgg cgttagtcat
     4081 acctagaata aaataatatt tttaattaaa ctgacaatta tttttcacat tttatacact
     4141 tttcaaggtt tatgacttga gaaatgttct catttttatc atactggagg tgtattgaaa
     4201 agttaaggag tggaaagtat gaataaagag caattagaaa aaatgaaaaa tggaaaaggc
     4261 tttattgccg cattagacca aagtggtggt agtacaccaa aagcacttaa ggaatatggt
     4321 gtaaacgaag atcaatatag caatgaagac gaaatgttcc aacttgttca cgatatgcgt
     4381 acacgtgtgg taacttcacc ttcattctca ccagataaaa ttttgggtgc tattcttttc
     4441 gaacaaacaa tggatcgcga agtagaaggc aaatacactg cagattactt agctgataaa
     4501 ggtgttgttc cgttcttaaa agtagacaaa ggtcttgctg aagagcaaaa tggtgttcaa
     4561 ttaatgaaac caatcgacaa cttagacagc ttattagatc gtgcaaacga gcgtcacatt
     4621 tttggtacaa aaatgcgttc taatatttta gaattaaatg aacaaggtat caaagacgtt
     4681 gttgaacaac aatttgaagt cgctaaacaa attattgcta aagggttagt gccaattatc
     4741 gaaccagaag ttaatattaa cgcaaaagat aaagctgaaa ttgaaaaagt attaaaagct
     4801 gagcttaaaa aaggtttaga cagcttaaat gctgatcaat tagttatgtt aaaattaaca
     4861 attcctactg aagctaactt atacaaagac ttagctgaac atccaaatgt tgttcgtatc
     4921 gttgtattat caggtggtta cagcagagaa aaagcgaacg aattacttaa agataacgct
     4981 gaacttatcg caagcttctc acgtgcatta gctagtgatt taagagctgg acaatctaaa
     5041 gaagaattcg ataaagcatt aggtgacgct gtagaatcaa tctacgacgc atctgtaaac
     5101 aaaaactaat ttatacatta aacgtatttt ttgatataaa ctactaaaaa ggactcatac
     5161 atgtgcttta aaggcattgt gtatgagtct ttttgattaa agttgatttt gcgtatgtat
     5221 tatagattac gcgaaaaaaa tcggacagct gaaaaatcta taagatttct cagttgcccg
     5281 attttaaata tagctattag aatttagttt tcgtagtaac ctaattctaa gtcttttgaa
     5341 gtttgtttac ggatttttct cattaatttt tcgtcttcaa ttaatgattc accgtatgat
     5401 ggaatcattt tcttgatttt aggtgcccat tcagttttgt attcagggaa gttacgttct
     5461 aatacttcta acgcaactga aactgaagtt gaagcccctg gtgattcacc taataatgcg
     5521 attacagtgt ggtcttgtga gttaaccact tctgtaccga attggatgaa tcctttaccg
     5581 tgttcaggtg tatctttgat aacttgtaca cgtttaccag cagtgtataa ttgccaatct
     5641 tcattacgtg cttctggata gaaagtacgt aagtggttca tacaaccttc ttttgtcata
     5701 atcacttgat caaatgagta tttaattaaa ggtaagtttt taactgctgc tgctaataaa
     5761 gttgtaatgt tgtatgtttt aacagacttg aataaatcta agttagaacc atttttcaag
     5821 aatttaggtc caacattagc aaatggtcca aataacaatg ttctttggcc gtcaatgtaa
     5881 cgcgtatcta aatgaggtac agtcattggt ggtgtaccag gtggctcttt accataaact
     5941 ttggcatcgt gttgttcaat aacttgtggg tttgtacaag ctaagaattg accactgata
     6001 gggaatccac ctaaatgttt actttcaggg atgcctgttt tttgtaataa tggaattgct
     6061 ccaccgccag caccgatgaa tacatagtca gttacttgtt tgaatttctc accagttagg
     6121 cgatttttaa cagtaacttc ccattgacca tttgataatt gttcaaaatc aacaacttca
     6181 tggttaaatt gcactgtagc atttggatgt gcttcaatgc ttttagccat tttacgtgtt
     6241 aattcaccga agtttacatc tgtaccttcg tcaattttac ttgccgccat gataccaggg
     6301 ttatcttcac ggcctttcat catcaatgga atccattttt tcattacttc gatgtcttca
     6361 gtatattcga tattatcgaa catagggaaa gctttcatcg cttcgtaacg atcttttaag
     6421 aatttaacat tgtttttacc tctaacataa ctgatgtgtg gtaatggatt gataaattct
     6481 cttgggttct cgatgctacc gcttttcact aagtgacccc agaattgttt tgaaatttca
     6541 aactcttcgt taatcacttt cgctttttcg atgtcgatag aaccatcagg ttgtaaaact
     6601 gtgtagttca actcacataa tgctgcatga cccgtaccag cattatttct ttcgtttgaa
     6661 ctttcaattg caggacgatc caagcgttcg taaacgtgga tattccagtc tggctcaatt
     6721 tcttttaaca ttgaaccaaa tgttgtgcta agtacaccgg ctccaattaa aacgatgtct
     6781 ttactattag acttagccat tggtttcacc tctccaaaaa ttgtaaatgt gtatcatcaa
     6841 tatgaaagtt acataaaact gacatatttc tttaaaatat caacgccata gataacttcc
     6901 tgttttaatt gatacgctgt aacaaaatac tatagttagt gcttacatat atatgttaaa
     6961 gcaagcagtg gtaaatgtaa attataatta ttcattaact ttgcaatata ttaaatcttt
     7021 tattcataga agataaatat caaatcgatc ataattattt gacaacaaat agctaacgat
     7081 tgttttaatc tacatttgac ttatagcatt ttaaacatat actctatttt gatacaatat
     7141 aagtgtaaaa tcaatcataa aaaggagatt caatatatgc atctaagaaa atcacttcaa
     7201 ttacctttaa tattgaaatt tattttgaat cttgccctta taggtattgt aattatcgtt
     7261 ctaacacata ctgagtttca acttaatgtc ggtgatagta atgtgttttt attaaactgg
     7321 gatattcgag gtttaacatc ttatattttc tcattcttaa tactggttgc gcttgtttct
     7381 aaactaatat taatatttat aactagacga caaagaacat cataaataaa caagcagtcc
     7441 agtgcgtatc atcatacctt acgcattgga ctgctttgct atgtttattg attgctatct
     7501 ttttgttgtt gccatttttc tatttcagca tctcgtagtt caacacgacg aattttacct
     7561 gagtttgttt ttggtaagtc gtcaacgaat tcaatctctc ttggatattt atatggtgca
     7621 acttcatttt taacaaattg ttgtagttct ttaactagcg tatcatcacc cgcagtatgg
     7681 tcctgtaaaa taacgaatgc tttaacaata tttcctcgta tatcatgagg ttttgctact
     7741 acagcacatt ctttaacggc tggatgattc gttaacgcat cttcaacttc aaaaggcccg
     7801 atcgtatagc ctgaactaat aataatgtca tctctacgtc cttcaaacca gaaataacca
     7861 tcatcatcta catgagctaa gtcaccagtg atgtagtatt tacctgtttg cgctttcgcc
     7921 gtacgttctg gctctttata ataccctttg aaaagtgctg gcaaatcaag tggtactgca
     7981 atattccctt tcgtattagc aggtacgcta ttcccttcat catctactac agtgaccgaa
     8041 ctacccggaa tgcctttacc cattgatcca atcctttgtg gtgtatcttt taaaaagcct
     8101 ataagcaagg tactttcagt ctggccatat ccatctctta cagttaaatt aaagtatttc
     8161 ttgaattgtt caactacttc tcgatttagt ggctcacctg cagaaacggc actatgtaaa
     8221 tgcgttaagt cataatcatt taagttctgt aatttagcca tcatacgata ttctgtcggt
     8281 gtacaacata aaacattaat ttgatatttt tgaagcaatt ctaagtatgt ttcagggctg
     8341 aatcttccat taaatacaaa agcagttgca cctgaaccta atacagataa gaaaggactc
     8401 catacccatt tttgccaacc tggtgctgct gttgcccaaa ctaagtcatc ttcattaata
     8461 cataaccaat gttttggtgc catttgtaaa tgtgcaaatc cccatccatg acaatgtgta
     8521 acggctttag gattgccagt tgtaccagat gtatatgaca gaatcgccat atcatcacgc
     8581 gtcgtatctg ccatttctag tttgttactt gcgttttctt tttcagcttc aagtgaaatc
     8641 catccatctt tttgaccggc aataacaaat ttagttaacg catcatattc tttaattttt
     8701 tcaaattcaa ctgtgaatgg ctctaatgca atgactgcat ttatttcacc gtgtgtgata
     8761 cggtattgta aatctttagt tcttagcatt tcagaacatg gaatgattgc aacacctaat
     8821 tttaaagcag caatatatag ttcatacgtc gcaatagatc gtggcatcat aatgagtact
     8881 ttatcgcctt tagataaacc gtgcgatgct aaaacattac ctactttatt agactgttca
     8941 atgagctgtt ggtaagtgac tgatatatct tcgccttcag tattatgata tagaattgcc
     9001 tttttatctg gtatgtggct atatttttcg atttccgaaa taatgttata tttttcaggc
     9061 gcgaatagag ctgacttttg cataactaac ttcctttcat acatccactt ttcctgtgat
     9121 gaacattata attttataaa tgaattatat atatcatacg cctatcttta cagaattttc
     9181 aattaaatag ggttaaatac caaagtcctc gacactacac tttgacatga cgtagcattc
     9241 aaggactttc aaatgattga ggattgatat ctcgggctag accatatcag ctaattcaat
     9301 acgaatattg tatgataatt cacgattaat tatttttaca tctgcacctt tcgaagtgcc
     9361 acgatgcttg tgtgtatgct tgtactcagt tgaattttgc caatgataaa atgcttgcct
     9421 attttcccac agcgtaataa tgatatagtg tctaccagct gttctaggtc ttaaaaacct
     9481 taatgctttg aacccatcaa cgttttttaa atgcttatta cgttgcaaaa atttttgctc
     9541 aaatgtttct tcttgtcctt cgttaatata taaatgattt aacacacata atgaatcatt
     9601 tgataaatca tttatcgctt ctagaacatc gtaatatgca gtgtcattat ttttttgtat
     9661 tgtgagacaa tcatccagtt cttctattac ataacttcta tattcatcat aaatgttcat
     9721 aataaatgcc ttcatttcat ttatattttt ggtcatatta ctttatatct attactaatt
     9781 cattcccgta tttattaatt acaatcatag tttggcttat ttttaaaaga taagactttg
     9841 taaaaagtat taatatttca tacaaatggg gacaggagtc gcccgctatt tttgtgtctt
     9901 caatttcata atcattattt aacattagtc atgaaaatag ccgacaactt catctgtgaa
     9961 atcaccggcc ttttatttta gctaacttta tttctgattt tacgatttta attgatcata
    10021 cagagaaagt gatcttttta caatttctaa aaactcatga tctatattgg acatttgatg
    10081 aaaataagac aaaatgtttt ctgttagctt ctcttgtttt gggaatgaat catcttcttt
    10141 aatccaaatc gctaattcgc ctaatggtgt tttatcatct ttaaatgttt gtatatattc
    10201 gtaaaagctc atagtattcc ttctctcaat ttacttatat aaatcctacc acgaaagctt
    10261 tcaagaaaac acaattaaat gtctatttag tgaacttttt aaggttgtac actcttttaa
    10321 tgtctgccaa ttaggtcaat taatcatcac aatgtacaat taactctact ttcagttcat
    10381 atactcacac acaccgtttt tgaacaacac attaacttct catttagata aaacgcaaaa
    10441 aagcctggca ccaatacaat agatgccaga ctaagagtct actatataaa tttatttagc
    10501 gtatggtttc acttcgattg caccttcatt ttcatcatga acaccatgct tataataatc
    10561 aatatattgt ggctctaaag gctttctgcc acgtataatg tctgctgctt tttcagctaa
    10621 cattaaaaca ggtgcatgta tattgccatt tgtcgtacgt ggcatagctg atgcatcaac
    10681 tacacgtaaa ttttccatac cgtggacttt cattgttaac gggtcaacta ctgccattgg
    10741 atctgaagca ggacccattt tagcactaca agatgggtgt aatgctgttt caccatctct
    10801 acgaacccaa tcaagaattt cttcgtctgt ttgcacttct ggtcctggtg aaatttctcc
    10861 accattgaat ggatccattg ctttttgaga taaaatattt cttgctacac gaattgcttc
    10921 tacccactct tttttatctt cttctgttga taaataatta aagcggatac ttggtttttc
    10981 gaatggatct ttagatttga ttttcaagct accacgagag tttgaataca ttggtcctac
    11041 gtgaacttga taaccatgtg cgaccgctgc cttttgacca tcatatctta cagctattgg
    11101 taagaaatgg aacattaagt taggataatc aacttcgtta tttgaacgta caaatccgcc
    11161 accttcaaaa tggttagatg ctgctgcacc tgtacgtgtg aaaatccatt gtaaaccaat
    11221 aaatggcatg cgcttgatat ctaagcttgg ctgtaatgat acaggttcct tacatttatg
    11281 ttgaatgtat acctctaagt gatcttcaaa gttttcaccc acaccaggta aatgaacacg
    11341 tggctcaatg ccttttgatt ttaggaactc tgaatcaccg ataccagata attgtagtaa
    11401 ttgtggcgta ttgaatgccc caccagacaa aatgacttca ttagcatcga tcgtatgtag
    11461 tttgccattt ttcttatacg taacaccagt tgctcttcta ccttcataat gaatttcagt
    11521 aacaaaggca cgtgtttcaa cggttaagtt tttacgcttc atagctggat gtaaatatgc
    11581 tcttgaagct gacattcggc gaccacgatg tacttgacta tcgaacggtc caaaaccttc
    11641 ttgtctaaat ccattcacat caggtgtttt atgatagcct gcttcaacac ctgcatcaaa
    11701 gaatgactgg aataaaggat tcgttgctgg ccctcgtttt aatttaattg gtccatcatg
    11761 gcctctaaat ttatcataag gcgctgcacc gtatgttttt tctaattttt taaaatacgg
    11821 taaacagtgc gcaaaatccc aagtttccat accttctggt tctgcccagc cttcatagtc
    11881 cattggatta ccacgttgat aaatcatgcc attaatcgaa cttgatccac ctaaaacttt
    11941 acctcgggca tgtgctactt tacgaccgcc catatgtggt tcttcatctg ttgaataaat
    12001 ccaatcgtaa aatttattgc ctgaagggaa cattaacgca gcaggcattt ggataaataa
    12061 atcccaaaaa taatcactgc gacccgcttc taatactaag acttctttat ctttatcttc
    12121 actcagacga ttacctagta cagaacctgc actgcctcct ccaatgatga cataatcata
    12181 tgatttattt ttgttactca tcgttatgac ctccaaagtt tgttgtattt caaagtgagt
    12241 attgcatgaa atatttgtta gtggctgatt ggttatcgtt gaattgctaa acttagctaa
    12301 ccaaaacact cgattttact tttatgattg ttactaacag tcatgaaata atctatgatt
    12361 cattttgcgt ttagtccaaa ttatcaatca acatatcgcc acttatacaa aacaaagtga
    12421 gtgtcttgtg ttcttacaat ggcactcacc ttatctaatt tttatttgct aaaccaattc
    12481 actaattgtg gatttgtatt tgttaaaatg tgttttgaaa caaggtactc ttctaagcct
    12541 tctttgccta attctctacc gatacctgat tgtttgtatc caccccatgg cgcttgtgca
    12601 aaatatggat ggaaatcatt aatccacacc gttccaagtt tcaacttgtt agcaacgcgt
    12661 tgtgcttttc caatatcttt agaaaataca gcacctgcta aaccatatat agaatcattc
    12721 gctaattgaa tcgcttcttg ttcagtttca aagccttcta cagtaacgac aggtccgaaa
    12781 acctcttctt gtacaatacg cattgacgta tcacaatttg taatgactgt tggctcgaag
    12841 aatagaccat cttttaaatc gtctctatct ggacgtttac caccaacagc aattgttgcg
    12901 ccttctgctt tagctacatc catataagat tcgattttat tacgatgttc tgttgaaatc
    12961 actggtccca tttcagtatc agcatcaaaa ccattaccta atttgatttt tttcacgcga
    13021 tcaataagtg cttgctcaaa tttgtcttta atactgtttt gtactaatat tcttgatcct
    13081 gctgaacaaa cttgacctgc atggaaatat ccaccattta acgcttggtc taccgccaat
    13141 tcaaaatcag catcatcaaa gataatgttt ggatttttac cgccaagttc caaggcaata
    13201 ttcgtaacat tattagcagc atttttcata atatgcttac cagtctcaat gccacctgta
    13261 aatgatacaa ggtcaacctc tttatgacct gacattacgt caccaacttc agaacctgca
    13321 cctagaataa gattaattgt tcctttaggg aaaccaactt cttccattaa ttcaaaaaca
    13381 cgtattgttg ttaatggtgt aatttcactt ggtttcataa ctagtgaaca acccgtagca
    13441 agcgctggcg caattttcca tgatgcttgt aataacggat aattccaagg tgtaatttgt
    13501 gtaactacac ctactggttc tttaacaatt ttgctttctg tatctggaat tggtgaatca
    13561 atcatttcgc caccatcttt atctgctaat ccagcaaaat acataaacac attatgaata
    13621 tcatccatat ctgcatatga ttcttctaac gtttttccag tatctaatgt ttctaatcgt
    13681 gctaacgctt cgcgatgttc tttgatcttg tccgcgatgg cacgtacttt tttacctctt
    13741 gtttcagcag tttcttgcga ccattcacca gactcaaacg cacgtcttgc agctaagatt
    13801 gcacgttctg catcctcttt tgtcccttca gaaaccgtaa atatcacttc ttgattgtaa
    13861 ggattgataa tatctcttgt atttttattc gcgctttcaa cccactcacc atcaatatat
    13921 tgacgctgag ataaatgttt taaaagttcc attcaacaac ctccgttaag tttgttaaat
    13981 ttttatttaa cgaattttac aaacttatgt tagcatagaa atgaaaaatg tgtcaattta
    14041 caaaacaact caagaattaa gttttgtaga ttcgttagat ttttatttaa cgaaacattt
    14101 aactttaatg ctttaaatat ttttaatgtc tttttttaga aaaggtttta taatgtatta
    14161 gtatttattt taacgtgacc aaaatgatgt acggaggtgc aatgatgact cgttctcaga
    14221 acaaacagca acaattagaa caagcaaaag atattgtaat taattcaatt ggacagacaa
    14281 tggatttgta tggcactaat agaagtgtag gaaacttata tggcactatg gtgtttgaag
    14341 gcagtatgac gcttgatgaa atgcgtcatc aattgcaaat gagcaaacca agtatgagtg
    14401 ctggcgttaa gaaattgcag gaatttgata ttgttaaaca acaatttacg agaggaagcc
    14461 gcaaacaaca ttttatcgcc gagaaagact ttttcatctt tttccgaaac tttttcacta
    14521 aaaaatttca gcgtgaaatt gacatcaatg tcgaagcagt aaaagatgct caggctatta
    14581 tcaatccatt acttgaaagc agtgatttaa ctgaagctga aacacaagag gcacaaaaaa
    14641 ttaaagttca gcttgatcat acacatgttt attacgaatg gttagaacag ttaaccgaag
    14701 cgattgaaag cggtgaaatt ttcaaatatt tcccaattcc agaacagcct tctgattctg
    14761 aaaactaaaa ttgactcaaa caacgacaat aacaacaata tatacttaaa acaatgcaat
    14821 aggtgcacga aataaacggt aatttctatc tcaataaata gaaattaccg tttttgctta
    14881 atatgacaat caattatgga gttataaaat tcaaaatctt atgcatcatt tattgaatta
    14941 taaattatcg tcttgttctt cttctgatac ttgaacgatt cgcaatgaac gacgttcaac
    15001 ttcttttaat ttttcagcac gcgtttcaag tttaattcta tcgcgtccta aaatgattaa
    15061 aaatgatatc atcatgaaaa taaaaataac aattaatggc acacttgcca gtattgaagc
    15121 agttttcaat acttctaatg cacgttcgcc accaactagc atcaatgaaa atggcaataa
    15181 gcacaatgca aatgcccaga ataaacgatt ggcacgtaat ggttcgccta ccactttttt
    15241 ctgagatgct gccgctaaaa tatatgaacc cgaatcaaat gttgttgcta agaataagaa
    15301 agcagatact aagaatagta caatcatcaa tgatgggaat ggtaaatgat gcaccacttc
    15361 aataatggtt gcctctgtac catgtgtatt taaatattgt gttacattaa actgtccaga
    15421 aatttgtaaa tatacagcat agttaccaaa aataccaaag aataatacac atccaagcgt
    15481 tccataaata attgttccta gcacaacttc tttaaggcgt cgaccttttg aaattctagc
    15541 gataaataaa ccgataaatg gcgcatatac taaccaccat gaccagtaga atattgtcca
    15601 gtcttgtggg aaattcgttt cttttcgacc tttaatacca ccgaacggtt ctaaccatgt
    15661 tgccatatgg aaaaaatctc tcaacatatt tccgaaccct gtcactgtcg tttccataat
    15721 aaaaacagtc ggtccaataa taaatataaa ggctaaaagt acaaatgata gccaaacgtt
    15781 gatatcactt aacttttgaa tacctttttt caatcctgta tacgaactaa tggcaaatat
    15841 aaccgtgatt gttaataaaa tggccgaacg taatatcata tttttaccat ctaaaccagt
    15901 taatctttct atgcctgcag aaattaatgg cacacctaac gctagtgatg ttgccgcacc
    15961 acctagcaat ccaaagataa ataagatatc tacaacttta cctacaaatt tatctgtttg
    16021 accttttaaa atcggacgac aagcttgact aattttatat accggttgtt ttttaacaaa
    16081 cactaaataa ccaattggta atgctggtaa aacgtaaata gcccaagcaa ttggtcccca
    16141 gtggaacata ccatattgcg tcgcatattg gagtgcttca tcactcatac ttttcgcgcc
    16201 atttggtgga acttgatagt aaaaagccca ttcaataacg ccccagtata aaatatcaga
    16261 gcctatgcct gcacaaaaca gcattgccgc ccatgtaaat gtattaaatt ctggtttatc
    16321 acttgcttta ccaagtgtga cattaccata tttaccaaat gcgatataca ttacaaagca
    16381 aaaaatcgcc agccccataa ataaatatat cgaaccaatt gaatcagaaa tggcactatt
    16441 aataccagtg atgatatctt cacttgcttt tggaaaagcc atcataggta taactgcaaa
    16501 aagaagtaca gctactgtcc ctataaaggt cgtccagtcc ataactttct cttttttcaa
    16561 ttgtgctccc cctaattatt aattttatga atcctgtttc gatttatctc aaaatgtaat
    16621 aattatattg attcacaaaa ttgacaataa ctaatattta ataataatgc aaatttcata
    16681 caatttgaaa cttggcaatt attgaatatt tatataattt ttctcgtaat aaacaaaact
    16741 ttaatagcgc taaaacagct gtgttaagtt atgatttaac gaatttaaca aattttacta
    16801 ggacggcatt taagaatatt tatacgtttt taacgaatat ttatttattg taaaacgcta
    16861 ccaaaaagtt agacttcctt cccactaaag tcccactttt cactttcaac ttttttaaaa
    16921 aacggatatg caacttttag tattagtatc aaaatgattg ttaggtcata ttctatcaat
    16981 atatttttct aaagaattgc ttttattaac tttcaattat gtacctaaca taaaaagaag
    17041 ccaaggcaac ggatgttacc ttgacttcta atacattttc aactaacaat atattcaatc
    17101 atacgcgcat gcgagagtga ttgttgtaca tctataattc gttgatttaa agaaccttta
    17161 tatggtaaat caggtttgaa taagtgttgt ataaatagcc catctactaa aacgtcaatg
    17221 tatgataata actctcgacg ttctgtacaa tcatttgcta aatattcata taaaaatcca
    17281 gtccataccc aaattgtctt tgtatttcca aaacgtgctc gaaatgcttt gacaagattt
    17341 aatgtaatat ccaaattaca aaatggttcg ccacctaata gacttagccc agatatataa
    17401 tcatgatcgc aatcatctaa tatttctgct aatatttcat cagtgtattt ctcgccatat
    17461 ctgaactttt gtgaggcttt gttgtaacat ccaacacaat taaatggaca tccagataca
    17521 taaacactgc atcttactcc ttcaccgtca acaaagctat ttgattctat tttagcaata
    17581 taaccttgtc cttgtttaat gtctaaaagt gtcattcttt aggcgctttc atatgtttta
    17641 ctcgtgcgca aatttcttta tgacggcctt taattactgg acgttgaact ggattgccta
    17701 agtaaccaca tgttcgttta acgacatcaa ctgttttagg attatcattg ccacagttcg
    17761 ggcatttaaa tcctttttca gttgcttcaa aatctccatc gtaatcacat tcataacaat
    17821 gatcaatcgg aatatttgta cctaagtaac caactttgtc ataagagtag tcccataccg
    17881 cttctagtgc tttcaaattg tgttgcaatt tcggatactc acaatagtga atgaaaccac
    17941 cactcgcata ataaggataa tctttttcaa aatctaactt ttcaaaaggt gtaacatctt
    18001 tacgtacatc ataatggaaa gagttttgat aatatccttt atctgtaatg tctttaatat
    18061 ctccaaatct ctcttggtct aaacgacaaa aacgatccgt tagcgattca ctcggcgtac
    18121 tgtaaatact gaaccaaatg tcatataatt ctgtccattt catttgataa cgtttcattt
    18181 ctttaagaat ttcaagcgta aatgcttttg cttcttgaga tgtttcccag tctggaccat
    18241 agaaaacagt agctgtttcg tataacccaa tatagcccat tgaaatcgtt gcacgtttgt
    18301 ttttaaataa ctcagcaaca tcatctgttt cttttaattt atagttaaaa gcgccacttt
    18361 tatataaaat tggtgcgtta ttcggtacag catctttcaa acgatttata cgataaagta
    18421 atgcatcatg taacacatcg atacgttcat aaaagatttc ccagaatttc gtcatattac
    18481 cggcagattc taatgccatt ctaggtaaat taagtgtaac aacaccaaga ttacaacgac
    18541 cattattttc aaaatgacct tccgcatctt tccaacttgg taaaaatgaa cgacaaccca
    18601 ttggtgcttt gaaatcacct aatatttcta cgagtttgtc ataatttaaa atatctggat
    18661 acatacgttt cgttgaacac tttaatgcta gttgtttaat gtcatagttc ggatcttgcg
    18721 gactaaagtt ggttcctttt tttattgaaa atacaagttt tgggaaaatc gctgtcgtgc
    18781 ggtcttttcc taagcctttg atacgagtat ttaagatagc ttgttgaatt ttgcgactta
    18841 aatgatctgt gcctaagccg aatcctaatg ttacaaaagg tgtctgtcca ttagatgtat
    18901 ataaggtatt aatttcatat tctaaacttt caatcgcatc attgatgtct ttagtgactt
    18961 gttgatcaac ataacgatca atttcagatt ctttgacaaa ttgctttgcg atatttctat
    19021 gttgttcttc attatgtcgt gcatatgtac taagtaattc gtcaacgcgg tcaaccgtac
    19081 agccaccata ttgactgcta gaaacattgg ctataatttg tacaagctgc gctgatgcag
    19141 tttgtattga ttttggtgaa gttacattcg cgttgcctat ttcaaatcca ttatgtagca
    19201 tatttttagc atctattaaa caacagtttg ttaacggttg gaatggatga taatctaagt
    19261 cgtgaaaatg tatgtcccct ctttgatgtg catctgcaac gtgctttggt aataaatgat
    19321 ttaatgcgta agatttagaa acgatacctg ctgttaaatc tctcattgtt gaaaatgtat
    19381 cactatcttt gttggcattt tcgttaacaa tagcaggatc tttagaaatc aaacccgtta
    19441 atgcttcttc gatttgattc attttacccc ttcttcctat atattgtgtc tacccattac
    19501 gttataccac tatatatagt attttcaaat ttttattagt ctgttaacta aaacgtcaca
    19561 aagttattaa catttagtga aattcatatt tccacacaat tatttcatta atttttaaaa
    19621 ttgtttaaag attcgtccgt catttcgaca tgtttatgca actattattt cattttgtaa
    19681 cgggaccata gtttctattt ttttcatact taaatcgtca caatacccat caacattgca
    19741 attactaaca taacgatggc gaatccccaa atccaaaaga atgcatactt aatatacgtg
    19801 cccatatttg cctctgctaa accaattgcc aaccataagg ctggtgaaaa tgggctgaca
    19861 aatgtaccta taatattccc tatgaccatt gaataagctg ttgatacaga cggtacacca
    19921 aattgccctg ctgtttgttc gacgatcggt aacacagcaa aataataagc gtctgtgcta
    19981 gttagtaaat ctaatggtac gccaagtaaa cctacaataa tatgcaagta tggtcctact
    20041 tctgcaggaa tcactttgat taaattcgtc gcaatcgctt taagcatacc ggtttcattt
    20101 agtacaccta aaaacatacc tgctgcaata atcactgcag ccatcattaa tgcattcggc
    20161 gcatgcgctc ttaatcgctc catttgttca tccactgatt taaaattaat aacaagcgcc
    20221 aacgagacac ctatcatgaa tgcaaattca ggtggcgcaa tatttattaa catcgctaga
    20281 ataacagcta aagttaaagc tgtattcacc cattttatcc atggttttgt tcgtgcacgt
    20341 ccttttacag gaaaccttac atcttgatct cgttcatata cttcaactaa tttatgtaca
    20401 tctatatctt gtgtttgagg taattcattg ctagcaattg cttttttgat acgtttttgt
    20461 tctttaaatc caagatatac cgcaaacaac ataacaagaa tgaatcctat tatttgaata
    20521 ggaattaatc cataccataa ttcattgaca cttttggctt ttaacactgc agctacacgt
    20581 gccattggac ctccccaagg taccatgttc ataatcgcag cacttaatgc taatagtaaa
    20641 atcaataaat atttattcat atttaacgct ttatataaag gtaataatgc aggaatagaa
    20701 agcaaaaatg ttaccgcacc ggcaccatct aattgggcta ttgtgccaat taaagctgtc
    20761 attgcacaga caataacgac attgcctcgt gtcattaata ttaagcgttt gacaagcggc
    20821 ttgaataaac cactatcgtt catgatgcca aagaaaataa tggcaaagat aaacataata
    20881 acaacgttga tgacttgatc taacccttta gcaaaaaatc caaccaaatc tgtcacacta
    20941 tatcctaaaa tcattgcccc taagcaaggt atgattgtca tacctacaac aggatttatt
    21001 tttttggcaa tgagtaaacc tacaattgaa ataataataa tgagccccat tactgttaac
    21061 cataaattat cactactcat attattttct ccctccatta aatataaaat tcacataatc
    21121 cccctcttta acttaaatat tataattaat ataatttttt atatttaagt tatctcattt
    21181 tatcaaaaaa atcttttttg cgtaatagtt aattcggata tctaattttt atgcagtgtc
    21241 tctaatgact atttgaatcc aattgactaa tttgaatctt ttcataagta tcatttttaa
    21301 tagcaatggt tgaattctcg gttctattac acaaaaaaac tggctaaaat tagctattat
    21361 tcatagcaac ttcaaccagt ttttctaata acctatatat ttattaagat ttttcaaatc
    21421 gtctatttct ctatgttaga aatcatctta catatgttta tcatcttcgc ttagaaatta
    21481 ttagtgtgca tcccatcttc atttacaaac agacatgtta ttacttcaag actgccttta
    21541 gacggcacac agttattatt ttttatctaa ccatgccaaa aattgagctt gtttagtatc
    21601 gtttaaaaat tctttcgtca ctatttgtga taacaattgc tgcttttcgc tgtgattcat
    21661 atcaagtact tttattttct gtcggcaagt atataaaaag tcgatatacg aactgtatga
    21721 tggtggatat aacgcctcaa gctctgccat aattgatttt gtcaacttag gactcgcacc
    21781 atcagttgat acactgatag ttagcttgtc gcggtgtagt gcacttggaa atacaacatt
    21841 gccatttgat gcatctccaa cattattaaa aagggcatgc tcaggtaagg cttgttttac
    21901 cgcttcattg acacgtggct cattggttgc tgcaatgact agatacgcgt ctacaatatc
    21961 gcttggttca aattcttttt ctttccatat gacgacacct ttatctacca tattttgaag
    22021 tttttcagtg atttcaggac tgataaccat tatatgttca atatattgac ttaatgtttg
    22081 tgcccgacga cttgcaacga cgcctccacc aactatgatg acatttttat ttgttaaatc
    22141 tatcattaat ggcatattca tgttgagcaa catcctttat ataattttac atcattacac
    22201 cttaaaatat ttaacaccaa tcgctaataa acatcacgtt gatagcgttg ttgttgtttc
    22261 atttgtcgca ataataactc tgcttcttct tgagaaatat gacgttcttt taccaataca
    22321 tctttaatgg cttgatggac atctttcgcc atacattttt catcgccaca aatatagatt
    22381 gctgcgcctt gctcaatcca ttcattgaaa cgttcacttt cttccattat acgatgctgt
    22441 acatattctt tatgttcttg gtctcttgaa aatgctaaat ctacgcgtgt taagtttcca
    22501 ttttcaagcc attcttctat ttcttcttca tataaaaagt cagaactacg gtgttgatca
    22561 ccaaagaaca accatgtttt tccagtcata ccaagttctt cacgttcttg taaatatgct
    22621 ctaaaaggag caattccagt acctggtcca atcataataa ccggtatatc ttgcttcatc
    22681 ggaaatttga agttcggatt tttcttcaaa taaattggta ctatatcgcc tggtttaata
    22741 cgctcagcaa aatgaaccga gcatacacct tttctctcac gtccatgtgc ttgataacga
    22801 accgtaccaa cggtaatatg cacttcatct ggcgttgcca taaaactact agaaatcgaa
    22861 tactctcttg gtggtaattt tctaaggatt tgatacatat tctcaggctg taattctata
    22921 gttggaaaat ctgttattaa atctataaag tcccgattta taacatattc acgcgcccat
    22981 gactcatctt gaatacgttc agataattct tcattgtcaa aatagatatc tgcatttttc
    23041 aataatggca atgttaattt agtaaattca aaatgtgatg ttagtgcttc aacaatagga
    23101 actgtatcac catgatcatt aattggcacc ggagattgtg gatcccaacc taacatggat
    23161 attagttttt caaccaattc agggtcgttt tgcggtaatg ctactataca atctcctggt
    23221 tcatatgatt cactaaaatc atcaagtaaa aattctatat gtcgtgtttc tttatttgaa
    23281 tcggtaccat ttaaattgat attcgctaat acttctgctt ggtatggatt cgatttggaa
    23341 tatttctttt ctttggcaga cttaattgat tcacttatca ccgattcact ttgaatacct
    23401 tctgatgtgg tatcaataat attaatgatg tctgccatcc acttttctgc gtcttcttca
    23461 taatcaatat cacaatctac acgcttacat atacgctcag cgcctagatt ttctagtaaa
    23521 gcatctacat ctttacctgc ttgacagaaa aattcatatg tttgatcacc taaagctagt
    23581 actgaatatc tcacatgatt taaattaggt gcgttatcgt cttctaaaaa ttcaaagaaa
    23641 tcccatgcat tatcaggcgg ttctccttca ccatgagtag acgtaataat aaataaatct
    23701 tctaactgtg cgatgtttgt cgtatcatat tcatccattg acatcaaaac aacttgatgt
    23761 ccgatatcac ttaaacgttc tgaaaaaatt tcagctaaac gcatggcatt acctgattca
    23821 gaaccatata gcactgtgac atgccgctga ttagcttcga tatgtggctc tttattttgt
    23881 aacatatacg ttgttgaagt tgcttgttct tctgatattt gtgattgttg ccacacttct
    23941 gtctctaatt gttgttgatt actatcactt gtcgtatcgt tactattagc tagtaaaaaa
    24001 ccactaagcc actgttgttg gctctctgtt aatgtttgca gcagattgtt aatctctgtg
    24061 acttgttttt ctgtaaatgg actattagat gtatttaatt tcaaatattt tcacctcaat
    24121 aaacttgaaa tagatgattg actcattttt tatcgatagt tcagtcaatt ttttaatatg
    24181 tatggtataa attaaaacaa acttgagttg tgtctgatag ttatacttac aaatatttac
    24241 aaccttcatg ttgcttgaat gacattatca gtaattcaga caaaactttg attatgtcgt
    24301 gtcagttatt aatgcataca gtaatgcatc gttgttattt tttatttatt tactatttat
    24361 tatgtaccaa atcagccttt cagtaaaata ggtcaaatta ctgattttct aaatataaaa
    24421 tgcctcctaa tgacatacta ttagtacatc attaagaggc tcttgtgtta tttgcatact
    24481 aagcgctcaa ttttaaattt aagatgaaga ttcttgcaat aatatttcta tatttgtcga
    24541 tatatccaat ggatcttcca ttggcaagaa tcgatttaca acattgcctt gtcgatcgat
    24601 tataaatttt gtgaaattcc attttattgg ggacccaaag attcctggtt gttcattctt
    24661 taaatgcgta aataacggat gttcatcgtt cccgttcaca gatattttag ctagcactgg
    24721 aaatgtaaca ccaaatttct cacgactaat tttcaagatt tcttcattag aacctggttg
    24781 tcgattgtca aaattattat tcggaaaact caacactaca aacccacgat ccttatattt
    24841 ttgaaacaaa gtctctagtt ttttcaattg ttcgctatat atacattctg ttgcagtatt
    24901 aacaactaaa atcactttac ctctaaatgc ttctaattta taagttaagc ctttataatc
    24961 acttacttcg atatcataca catttctatt attcataaga cacccctaca cagccttttt
    25021 tatattgaat atgttctttt tagaatgttc tgataaaata agtgcgcgtt tataccgcga
    25081 acacacatta tatagcgtga tacatttttc gagcacacga taaataatgt tcgagtttat
    25141 gttgttgctc aacctatccg atttaccgtc ttttttcacc tgtcttactt tattaaaata
    25201 atcacattgt atagctgtat tagtccagct acaatatctt tcgttataac ccctcattat
    25261 aatcatcctt attttctatt tttaaaaaga caattagacc gctctttaaa ctatagatta
    25321 atacttaagt taaactcata catactgata ccatacgtta aatctaacaa tttaaaattc
    25381 gttataacta tggattaaag agctgcccaa ctcatataat ccttaaaaac ttcacatgtg
    25441 attgtttatt aagccctcct ttatcttatt aaatatcctt ataacccttt taaaattaaa
    25501 ctgacacact catacatagt tacacgcgac gataaacgtc atattattgc atatcattaa
    25561 aacaagtcac tttgtatcgt gtgcgaccga atacatatta aatcatcaat aatgattatt
    25621 caattattaa aaataaaaac gaacattcta tatagagttt ccacttattg ttttttcagc
    25681 attgtcttca ttacttaaca ttcgtgtttg taagtaatat tgaccaccaa tatttagaca
    25741 ctttataagt atgccaatca tcatttttaa tcatattatt tttcatattg atatttctat
    25801 tcatatattt ctgattgtat atttagatat aatcatttgt tattggaaaa tatatgaaac
    25861 aaatttgact catctttttc aatatctaaa tgacacgatg catgattttt gaattttgta
    25921 attaatttac tttaacttcc ttttaaatta gactgaattg ttacaatttt caaacatttt
    25981 aatgtgtaaa tcattggcaa aatatacgaa ttgcatttaa atcgtcaatt tacatatatt
    26041 tttgcgtagt aatcaatcgt tatcattgtt atttatcgtt acattaattc gagtatcagt
    26101 atgtatttcg ggcttcgttt gataacgaca tttctttgtg acatcgcttc atcagtgtaa
    26161 caacaaatac aatgatttcg tgatgttagt tacccatttt atgtgttgca taaaatatgt
    26221 tgttataaaa cattttaaat cattttatat aaacaagcta tatatttttg atatttccaa
    26281 aatatcactt gttatattaa aaaccgacaa gacattttat cttatcggtt aaaatttgtt
    26341 attgttattt gtaatgtttt taggtttctt tttaatataa tatatttcag tgaaaataca
    26401 tgattgattg tgatttcact gaaacatggt taattacgtt gttgatgaat aactttagca
    26461 taaatatagg aagttatttt gtacatcgcc atatatagaa acgaaattat aatgacagtt
    26521 agtacgtaac ttgttaaaaa tatatgatgg ttattaatac ctatcatatt tagtaacgta
    26581 tatacaatgt tactagaaat taatgtatga atcagtgcta ctgttattgg tattgcgaac
    26641 aagaaagtca tttgatttcg tgttatcttt gctattcttc cattatctaa accaagtttt
    26701 ttcataatgt cataattgtg ctgatttgca taggcttctg aaacttgttt atagtacatc
    26761 attagaaata ttccaatgac aagtacaatt gatactacgc cacctacaaa tattagtcca
    26821 cctgtcagac gatcccaaac cattagcatt tctgatttag aatttattga cgcatcgtat
    26881 tttttcgata gcttttgtat ttgtgatgtt gttaatttcg tctttccaga tacattaaag
    26941 tttatcgata ttgtcgactt cttttgttca tgtgcataaa atccttttac tttttgtaat
    27001 tgattgttat ctttaacaat taaaaccata ctatcttgaa tcatcatcaa atttaacgca
    27061 tgtgcgtcaa gttgtttcac tttaaagact tcattattaa gaccgacctt agactgcttt
    27121 ttaaaaatag gtacattcgt aatcatacct atactttgat tgtctaagtg taatttgttt
    27181 tggtgatatc gattataatc ttgcacagta agtgctgtga tcattactga ttgcttagaa
    27241 aatatcgagc cttcattacc aatgaagtct attggaatat catcactagc ctgttttaac
    27301 ttgtaataag cacgattctt ttctaaagaa gctctaaata atgtcgtttc atatactttg
    27361 aagtcttttg cattaaccga accctgtata tcacgtttaa tattctcaat cgtttgttga
    27421 cgttctatgt gtgacttaga attgtcgtta aacgacaaat cataatcatt cgtaatcaat
    27481 ttcataatgg tatgattcat atcgcgatag gttgttaatg tcattgtgag cgttacaatc
    27541 aaaaatgtac acagcaaagt gattgttgca agactgactg cattcatttt aagacgtaca
    27601 cgcatcccaa ctaccacaaa aaaataccgt ggatgatagt aaacttttga tgcctgctgc
    27661 aatatactaa taattatttc acttatacct acaaaaaatg cataagtacc gataataact
    27721 aatcctatga caatccatat tttaaaaaag gcaccaaacg tcgtatcttg ttgtaatgca
    27781 ataaagtagc ctaaatatag tgctgcgctt cctataacaa ttaaaacgta acgcaaccat
    27841 cgtgatatga cactggaatc ggaacgatgt tgataagtta tcggtcgttg aaaattaata
    27901 ctgaacaagt tgaatataag tagcatgccc attaatacag caatgataat caaagtaata
    27961 aacatcgcta cagagtcaaa tggataatac cttaacgttg caacttcaat gcccattatt
    28021 ttctgtataa acaagaaaaa tatcgcacca agtaagtatc cgccggcaat actaacgact
    28081 gaaattatta taaattgtaa gatagtttcc atcactacaa ttaaacgcat acttttcttg
    28141 gtcataccca atgtcataaa aatgctaaac tcttttcgtc tttgtgacat cataaagtga
    28201 tttgcataga aaataaaaat aaaagttaaa agcgccataa aaaaattagc tatgataata
    28261 aatggtacta ggaagtcatt cttctgtttt atgtagctat ttaacccaat tgacacaagc
    28321 gtatattcaa tcatgaatag tacacttacc gctaaaatga atggaatgat tacaagtcgc
    28381 tgcgtgataa attgacgtcg cattatgtgc cataacaatc ttaacttcat atattgacac
    28441 ttcctccatt cacaagtgct aagctatctg ttattcgttg ttgaaaagct aattgacttt
    28501 cttcaccacg atatatttca tgatatagac gcccatcttt aataaaaatg acacgctctg
    28561 cataagacgc atcgatattt gaatgagtta ccattaaaat tgtctgttcc aattgatgaa
    28621 tctcttgaaa taacatcatc aatgcctttg atgtttttga atcaagtgca cctgtaggtt
    28681 catcggctag taaaatcgtc ggtttagtaa ctaatgcacg tgcaatggca atgcgttgct
    28741 tctgaccccc tgagatttca gaaggatatt tgtttaaaaa tccctctaaa tgtaattgta
    28801 ctgtcaactg atgtaccctt tgttctatat cttttcgttt agcaccagct aaaattaatg
    28861 gcatcattat attttcttta ttcgtcattg ttggtaaaag attaaaatct tgaaaaacaa
    28921 aacctaccat ttgttgacga tacaatgctt tacttttatt tttcatatta tttaaatgtg
    28981 tgccatccac aataatgtca ccttcagtta gtccatcaaa agaagcaatt aaatttagta
    29041 gtgtagactt ccctgaccca gactcaccca taattgcaac aaattcacca gctccaactg
    29101 ataaattcat ttgattaagt gctgtcgtag cattcaaacc tttaccataa acctttttta
    29161 catgtttcac ttctagcaac atggcatgca cctcatttct ttgttagttc tatattaaaa
    29221 caaaaaaata ctaataacat ttaaattagt gaaaaaatgt tactagtatg cttacaatat
    29281 tgaaagtttt tattcatctg gaaattgaat cgtaaatgtt gtaccctcat tttgtttaga
    29341 tacgactgaa acaggatggt ttgtgtgagt tgaaatttgt tttacgataa ataaaccaat
    29401 cccacttgag ttactttggc gctggccatt ataacctgaa tagcccttat caaatatttt
    29461 aggcaagtcc gcttcactaa taccaacacc attatctttt acgtataatt gattggattg
    29521 ctcatcaaat tcaatccata tatctttacc tctcgcatac ttaagtgcat tatttattaa
    29581 ttgttctatc attaaagagg tccatctaac gtcagttaat acttcgtgat gacaaggttc
    29641 ataatggatt tttgtttttt gatcaataaa ctgtattgaa tatttcataa taattgggcg
    29701 aatgatattg ttaatcgaaa ttttagtgac agaaatatca gaagtttcat ttaataactt
    29761 taaataacta agtgctaaac ttgtatagtt atcaatttga ataacctctt gacgaacacg
    29821 attcacaaca ttaggctcat ctctttcaag taacagttgt gctgcagtaa tgggtgtttt
    29881 catttgatgt acccatgtta aaaagtagct ctctacatca tttttatatt caatttgttc
    29941 atttttaagc tgatacaacg cattttctaa gttttcaatt tgttgttgtt ggcttatagt
    30001 ttttacaaaa cttaaatatt taatacctat gaatatgagt aataataata aaataacgcc
    30061 aagtgctagt aaatatgctt ctaatggcaa atgatacagg taaaacatta agccaaataa
    30121 agcaaaaata actatgacta ttgctatttc ctgagtaata cttttaagaa aggtcattgc
    30181 attcacccta tactttatat ccgacatttt tctttgtaat gataaaatca ttaacgccaa
    30241 tagtatttaa ttttttacgc aggcgcgtca tgttaacagc taatgtgtta tcatctatga
    30301 agttttctga ttcccaacat ttttcaatta aagcagttct acttacatat ttatcttcat
    30361 tttgaaataa taactttaat atttgtaatt cagtcaaaga tagctgtatg ctttgttctt
    30421 gatacacgac ttttgcttca tctaatatta atgtacaacc tttaaccgtc atcgaatcat
    30481 tagctactga caagtcataa gttcgtctca ataatgcttg aattttggca atcgttaatg
    30541 acaaattaaa tggtttttcg ataaaatcat ctccccccat ttgtattgcc ataatttggt
    30601 ccatattatc aatacgggaa ctaataaata taattggcac attagatgtt tttcggattt
    30661 cttgacacca atgaaaacca tttaacgttg gcaaattaat atctagcaat acaagctgag
    30721 gttgatgttg gttaaagata gacagtatat catcaaattg ttcaacgaca ataacaccgt
    30781 aattccattt tttaagttca gatgctaaac tttctgctat aacaaaatca tcttcaacaa
    30841 ttaatatttt catctataat cttcttcctt caattgaatt atcctttgtc atctttttgt
    30901 tctttagcct gctgcaatga cggctcttga tttgaacttt ccgtatcatt tgtattttga
    30961 tttagtgtat ttgctttttc tttctcgagt tgctttttct tcgtacgttt acgctcttct
    31021 aaaatagaca acactataaa gaatatgatt aataatggag ataacattac tagtatcatt
    31081 tttccacctc aaattatatt taattctata ttttcacacg cttctattct aacgctttct
    31141 ataacaaatt gtcatatata ttcatttttt gttattctaa atcactctgt ttacatattt
    31201 ttaactaaaa ctacataatt gctcaaaatt cctcttttac actgaagaca tagtcatata
    31261 ctcaggagga tgtcttatgt tatcagttaa aaaagccaca aaatttgcag ttgctaacct
    31321 tattatcgtg tcaacagttt tcagttctgt cacacctgca attgcgcaat ccgataaaag
    31381 ttctaaagat gaaagtttcg cggttggtaa tactaaaaat ccaaaaaatg ttatcttttt
    31441 agttggcgat ggcatgggtc catcatttaa cacagcttat cgttattata aaaatgatcc
    31501 gcatgctaaa gaaatgaccc ctactgcttt tgattcatat ttaaaaggca caaatcgtac
    31561 atattcaaat gacccaaaac agaatattac tgattctgca gctggcggaa cagcctttag
    31621 ttctggtcat aagacatata atggtgccat cggtgttgac agtaacaagc agaaagtaaa
    31681 gacggtgctt gaacgtgcaa aagaaaaagg taagtcgact ggtcttgttt caacagctga
    31741 attaacagat gcaacaccag cagcatatgc tgcacacgtg acttctagag atgataaaaa
    31801 cgaaatcgct aaacaatttt ataaagataa aatcaacgga aagcataaag ttgatgtttt
    31861 attaggcggt ggcgctaaat atttcggtaa aagtaatggc aatttagata aaaaattcaa
    31921 aaaagatggt tatgatcttg ccacgaacag taaggagtta tcaaaatctg ataaagataa
    31981 agttcttggt ttgtttgcag ataaaaatat gccacttgca atagatgctt ctaaagacga
    32041 accatcatta gctgatatgc aacaaagtgc acttaataag cttgagcgta ataaaaaagg
    32101 tttcttttta atggtcgaag gtgcttctat agataaatca gcgcattcca acgatattac
    32161 aggcgttatg tctgaaatgg aaggttttga aaaagcattc gatgacgcca ttcaatatgc
    32221 taagaagcat aaagatacac ttgtcgttgc aacagcagat cactctactg gtggtctaac
    32281 aattggtaaa gataaaggat acgaatggaa tcctcaaccg attaaatcga tgaaacactc
    32341 tggatcatat atgacagaaa aaatggctaa aggtgaagac cctgaaaaag ttattaatga
    32401 aggttatggc tttgaatttt cacaagatga tatgaaaaag gttaaaaaag agaataaaaa
    32461 gctaaaaaga ctacttaaaa aagaaaaaga cgaaaaatcc gcagaagtag aaaaacaaac
    32521 aaaagcctta caacacgcaa ttcagaagcc agtaaatgat aaatcttata cagggtggac
    32581 ttccgatgga catacaggcg aggatgttaa tacctacgct tatggaccta gatcagaatc
    32641 atttagtggt aatatcgaaa atacagaaag cgcaaaaata atatttgata tattcaagta
    32701 aagcataaaa aaattcccga gcactacaac aaggtgttcg ggaatttttt atggtttaat
    32761 ttagtactca atgttaggtg cttggttaac acgttcttgg tattttttaa atgcgaagta
    32821 taaaccgcca actaatgtta aaataactgc taattttttc atcattcaaa ctcctttcta
    32881 agatgtgttg aaactgagtt caattaaatt atatgttttt attatacact ttttgacata
    32941 ttttttaaat ttaagaatgc gaagattttt aacatttctg atgctagctt tctttttcat
    33001 ctttcaaatg cttaataaaa tcaaagccag gtcgcccttt agccaatgct tccatcacat
    33061 cataccaatc cgaaccgact tgttgatata tattttgcaa taattcatct tgcgccttgt
    33121 tcaattcagc aatgagttga ttgcctttat ccgtcgaata taattttttg acacgtcgat
    33181 cagtctctaa aattttttca ataatgagac cttgctcttt taatttttga agtgttgcat
    33241 gtgatccttg tttagaaatt tctaatattt ctagtaatga tttaatagta ataccaggta
    33301 atttattgat aaaaaacaaa aaacgatgat gctgacgact cataccatac ttctctataa
    33361 tttcatcagc ggtagtaata aacgttttat atgcaaaata aaacaacata tgctcataat
    33421 cgtttttatt ggtcgacatg atgatgactc ctttcaaagc gttaacctca ttataataaa
    33481 atttataatg taagtcatac aaatgatgat aaaactataa gctaaatcta agtttcacga
    33541 gaaacatttt tgtgtatcag caaattgcgc caatcatatt aatacaaatt taatttaaac
    33601 actcagaaat gttagtcgtg cgtaaatagt ttgtatcact cactctgtgt atttaatgca
    33661 gtcacatatt ttccaggaaa taattaatca ttcaccatcc atgttatagc acgcttaatc
    33721 gcttggtccc aatatgcata atcatgatct cctggtccat cttcaaattg ataaggaaca
    33781 tttttgcgtg ataaataatc gataaaatct aagttgtctt gatataaaaa gtcttgtttc
    33841 ccacacataa tgagcaattt tggaatttgt ttatcttcag ctacagcttt gtctagcaag
    33901 taatacggat catgttcagt tcctttaaca cttgaaagat tgccaattat ggcttctttt
    33961 gaaaaatcat tccactctag atccattaaa ttttgcgctt caaatacagc agataatggt
    34021 acagctttgg caaatttatc cccttgtgtt aatgcaaatt taattgtgcc atatcctccc
    34081 atagagtgac ctgcaataaa attgtcatca cgctttttgg aaagtggaaa tatttgatga
    34141 acataatcat atacttccaa aatataatca taatagctat gaccatatgc catgttagca
    34201 tatgcgctat gatccacatt gggcataatc acagctaatt tgtgttcatt cgcatacctt
    34261 tctatgcttg tatatctcat atatgtcgtt tcatcacttg ataatccatg taacaacatt
    34321 aaagttttta atggtttagc agttgtatcg ttattaaaga agctttgatc ttccggtaaa
    34381 atgactgtca aattttgatg cataccaatt gttggtgaat gatagtttaa tgaaatataa
    34441 gccatacgtc atgacccctt tctaattcta ctttatcaac attttacgct taaacaattc
    34501 actttaaaat cattttcaac aaaaaaaccg aatacaaatg tattcggcct aaaaaagtat
    34561 ttacgctttt tctttatgat cttgcttgcg ttttctaaac aatagtaatg atcctaataa
    34621 tgccatcatt gcaccaaata aagttgcatt tgtgttttcg ctcttatctc ctgtttctgg
    34681 taaagcatca gttttgtgtt gttttgatgc cttattagaa tggtttactt cacctttagg
    34741 atttgatggt gctttctgtt cattatttgg tggtgtaact cttgaatcag agtcgctatc
    34801 tgagtccgaa tcgctatctg aatctgaatc gctgtctgaa tccgaatcac tgtctgagtc
    34861 tgaatcacta tctgaatctg agtcactgtc tgagtctgaa tcgctgtctg aatctgactc
    34921 gctatctgaa tcggagtcgc tatctgagtc cgaatcgcta tctgaatcgg actcactgtc
    34981 tgagtctgaa tcactatctg agtctgagtc actgtctgag tctgaatcgc tatctgaatc
    35041 tgactcactg tctgagtctg aatcgctgtc tgaatctgaa tcactatctg agtctgaatc
    35101 actatctgaa tc
//
LOCUS       DALMNS010000014        34974 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.014, whole genome shotgun sequence.
ACCESSION   DALMNS010000014 DALMNS010000000
VERSION     DALMNS010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 34974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34974
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.014"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(300..1682)
                     /locus_tag="O6Y56_000564"
     CDS             complement(300..1682)
                     /locus_tag="O6Y56_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDB5573855.1"
                     /translation="MKNTLYHQLYEKLKKQIIEGQFQEGDKFYSKRQLSKHLSISQTT
                     VEHAYQLLLDEGYIYSRPRSGYYVSEIESLTILNTQPIHSLFDDDSYKPKTSDETYDY
                     AFNLDEIDTKHFPIELFRKYSKDLYDKTHSNKLLRGHFQGELHLRFQLAFYLFTNRGV
                     ICDPNQIIIGSSTEQLVNQLVDLLYTSTFIIEKPSYPPIKNILDKKQVEYEQIEVEDN
                     GINVDEVIKSQKNIVYITPSHQFPTGYVMDLKKRTQLIQWAQEKEERFIIEDDYDSEF
                     RYFGKPIPAIQGLYSRGEKVIYISTFSKSIFPSCRVAYMVLPYSIMKKYHSQNHIEGN
                     TVPVHMQNLIAMFISSGGFERHLNKMRRIYRRKLTYILNRLKPYKEQLDIQGAETGMH
                     FTITVKNGLTLQKCLDRANKVNLKLQVYNFDDDQDYKKTPKFILGFGGIDDDALKPHV
                     DALIKSLIIK"
     gene            1786..2673
                     /gene="pdxS"
                     /locus_tag="O6Y56_000565"
     CDS             1786..2673
                     /gene="pdxS"
                     /locus_tag="O6Y56_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HDB5573856.1"
                     /translation="MSKIIGSDRVKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVM
                     ALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYI
                     DESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVE
                     AVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPYEILKQIKDNGRLPVVNFAAGGVAT
                     PQDAALMMELGADGVFVGSGIFKSEDPEKFAKAIVQATTHYQDYELIGRLASELGTAM
                     KGLDINQLSLEERMQERGW"
     gene            2677..3237
                     /gene="pdxT"
                     /locus_tag="O6Y56_000566"
     CDS             2677..3237
                     /gene="pdxT"
                     /locus_tag="O6Y56_000566"
                     /EC_number="3.5.1.2"
                     /EC_number="4.3.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase glutaminase
                     subunit PdxT"
                     /protein_id="HDB5573857.1"
                     /translation="MKIGVLALQGAVREHIRHIELSGHEGIAVKKVEQLEEIEGLILP
                     GGESTTLRRLMNLYGFKEALQNSTLPMFGTCAGLIVLAQDIVGEEGYLNKLNITVQRN
                     SFGRQVDSFETELDIKGIATDIEGVFIRAPHIEKVGQGVDILCKVNEKIVAVQQGKYL
                     GVSFHPELTDDYRVTDYFINHIVKKA"
     gene            complement(3445..4659)
                     /locus_tag="O6Y56_000567"
     CDS             complement(3445..4659)
                     /locus_tag="O6Y56_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDB5573858.1"
                     /translation="MHILIGIIGIIFFLALAFLFSSDRKNIRWKYVGILLAIQLIFAF
                     ILLKTTMGIKVIGGISNGFNYLLLKAADGVNFVFGGIQYIDPKQPPFFFSVLLPIVFI
                     SAIIGILQYTKILPLIINVLGFLISKINGMGRLESYNAVAAAILGQSEVFISIKKQLP
                     YIPKQRLYTLTASAMSTVSASIIGAYFTLIEPKYVVTAVVLNLFGGFIIASIINPYKV
                     NEEDDKLLVEETEERQQSFFEMLGEYILDGFKVAVIVGAMLIGYIAIIALLNGIVSNI
                     FSTVSGGAISWDFQTLIGFVFAPFAFLVGVPWQDAVQAGSVMATKLLSNEFVAMQALG
                     KLSDLSEHAKGVTSVFLVSFANFSSIGIISGAIKSLNDKKGDTVARFGLKLLFGATLV
                     SFISAAIAGFFI"
     gene            4817..5278
                     /locus_tag="O6Y56_000568"
     CDS             4817..5278
                     /locus_tag="O6Y56_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000551761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CtsR family transcriptional regulator"
                     /protein_id="HDB5573859.1"
                     /translation="MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNY
                     VIKTRFTNEHGYEIESKRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYII
                     DGLLDKMLINEREAKMIQAVIDRETLSMDMVSRDIIRANILKRLLPVINYY"
     gene            5297..5863
                     /locus_tag="O6Y56_000569"
     CDS             5297..5863
                     /locus_tag="O6Y56_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000882074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HDB5573860.1"
                     /translation="MLCENCQLNEAELKVKVTSKNKTEEKMVCQTCAEGHHPWNQANE
                     QPEYQEHQDNFEEAFVVKQILQHLATKHGINFQEVAFKEEKRCPSCHMTLKDIAHVGK
                     FGCANCYATFKDDIIDIVRRVQGGQFEHVGKTPHSSHKKIALKRKIEEKNEYLKKLIE
                     IQDFEEAAIVRDEIKALKAESEVQHDDA"
     gene            5853..6860
                     /locus_tag="O6Y56_000570"
     CDS             5853..6860
                     /locus_tag="O6Y56_000570"
                     /EC_number="2.7.14.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein arginine kinase"
                     /protein_id="HDB5573861.1"
                     /translation="MTHNIHDNISQWMKSNEETPIVMSSRIRLARNLENHVHPLMYAT
                     ENDGFRVINEVQDALPNFELMRLDQMDQQSKMKMVAKHLISPELIKQPAAAVLVNDDE
                     SLSVMINEEDHIRIQAMGTDTTLQALYNQASSIDDELDRSLDISYDEQLGYLTTCPTN
                     IGTGMRASVMLHLPGLSIMKRMTRIAQTINRFGYTIRGIYGEGSQVYGHTYQVSNQLT
                     LGKSELEIIETLTEVVNQIIHEEKQIRQKLDTYNQLETQDRVFRSLGILQNCRMITME
                     EASYRLSEVKLGIDLNYIELQNFKFNELMVAIQTPFLLDEEDDKSVKEKRADILREHI
                     K"
     gene            6874..9330
                     /locus_tag="O6Y56_000571"
     CDS             6874..9330
                     /locus_tag="O6Y56_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HDB5573862.1"
                     /translation="MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEG
                     IAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLHYTPRAKKVIELSMDEARKLHHNF
                     VGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKSNNT
                     PTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIA
                     EGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVIL
                     FIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRF
                     QPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAI
                     DLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLE
                     KQYEEAKNEWKNAQNGMSTSLSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLHE
                     RVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDD
                     DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHP
                     DVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDY
                     ETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNIN
                     IIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHDG
                     KEFKYDIAEQTSETKTPSQA"
     gene            9816..11180
                     /gene="radA"
                     /locus_tag="O6Y56_000572"
     CDS             9816..11180
                     /gene="radA"
                     /locus_tag="O6Y56_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499080.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDB5573863.1"
                     /translation="MAKKKVIFECMACGYQSPKWMGKCPNCGAWNQMEEIVEKAANPK
                     HGVKTKELAGKVQKLNSIKHETTPRVLTDSAEFNRVLGGGIVSGSLVLIGGDPGIGKS
                     TLLLQICASLSQKKKVLYITGEESLSQTKLRAERLDEDSSELQVLAETDLEVIYQTVK
                     EEQPDLLVVDSIQTIYHPEISSAPGSVSQVRESTQSLMNIAKQMNIATFIVGHVTKEG
                     QIAGPRLLEHMVDTVLYFEGDEHHAYRILRAVKNRFGSTNEMGIFEMKQSGLKGVNNP
                     SEMFLEERSTNVPGSTIVATMEGTRPLLIEVQALVTPTTFNNPRRMATGIDHNRLSLL
                     MAVLEKKENYLLQQQDAYIKVAGGVKLTEPAVDLSVIVATASSFKDKAVDGLDCYIGE
                     VGLTGEVRRVSRIEQRVQEAAKLGFKRVIIPKNNIGGWTYPEGIQVIGVTTVHEALSF
                     ALHS"
     gene            11205..12278
                     /locus_tag="O6Y56_000573"
     CDS             11205..12278
                     /locus_tag="O6Y56_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017328539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN/TRAM domain-containing protein"
                     /protein_id="HDB5573864.1"
                     /translation="MNIVKLMVIIIYLIIGSALGIIIIPEIANDLGLQNSSFLKNHYV
                     DGIIGSIFMFLIFGVFIRRVTNAIKGLEHFIMRRSAVEILFATIGLIIGLLISVMVSF
                     ILESIGNSIFNHFIPVIITILLCYFGFQFGLKKRDEMLMFLPENIARSMSQHTKSATP
                     KIIDTSAIIDGRILEVIRCGFIDGNILIPQGVINELQIVADSNDSVKREKGKRGLDIL
                     NELYDLDYPTKVIHPTKSHSDIDTMLLKLAKQYHSNIITTDFNLNKVCHVHGIKALNV
                     NDLSEAIKPNVHQGDQLHILLTKMGKEPGQAVGYLDDGTMVVVDNAKNLIGSHVNLEV
                     VSLLQTSSGRIVFAKKIEDTVSL"
     gene            12835..14289
                     /locus_tag="O6Y56_000574"
     CDS             12835..14289
                     /locus_tag="O6Y56_000574"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDB5573865.1"
                     /translation="MSDRIRVRYAPSPTGYLHIGNARTALFNYLYAKHYNGDFVIRIE
                     DTDKKRNLEDGETSQFDNLKWLGLDWDESVDKDNGYGPYRQSERQHIYQPLIDQLLAE
                     DKAYKCYMTEEELEAEREAQIARGEMPRYGGQHAHLTEEQRQQFEAEGRQPSIRFRVP
                     QNQTYSFDDMVKGNISFDSNGIGDWVIVKKDGIPTYNFAVAIDDHYMEISDVIRGDDH
                     ISNTPKQIMIYEAFGWEPPRFGHMSLIVNEERKKLSKRDGQILQFIEQYRDLGYLPEA
                     LFNFIALLGWSPEGEEEIFSKEEFIKIFDEKRLSKSPAFFDKQKLAWVNNQYMKQKDT
                     ETVFQLALPHLIKANLIPEVPSEEDLSWGRKLITLYQKEMSYAGEIVPLSEMFFKEMP
                     ALGEEEQQVINGEQVPELMTHLFSKLEALEPFEAAEIKKTIKEVQKETGIKGKQLFMP
                     IRVAVTGQMHGPELPNTIEVLGKEKVLNRLKQYK"
     gene            14712..15359
                     /gene="cysE"
                     /locus_tag="O6Y56_000575"
     CDS             14712..15359
                     /gene="cysE"
                     /locus_tag="O6Y56_000575"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDB5573866.1"
                     /translation="MILLKRMRDDIKMVFEQDPAARSTLEVITTYAGLHAVWSHLIAH
                     KLYNKKKYVAARAISQISRFFTGIEIHPGAKIGKRLFIDHGMGVVIGETCTIGDNVTI
                     YQGVTLGGTGKERGKRHPDIGDNVLIAAGAKVLGNIKINSNVNIGANSVVLQSVPSYS
                     TVVGIPGHIVKQDGVRVGKTFDHRHLPDPIYEQIKHLERQLEKTRNGEIQDDYII"
     gene            15343..16743
                     /locus_tag="O6Y56_000576"
     CDS             15343..16743
                     /locus_tag="O6Y56_000576"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000631968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDB5573867.1"
                     /translation="MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPA
                     INYDVVRRYFEYQGYNVEYVSNFTDVDDKLIKRSQELNQSVPEIAEKYIAAFHEDVGA
                     LNVRKATSNPRVMDHMDDIIQFIKNLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSID
                     DLKVGARIDAGEHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGP
                     TIDIHAGGSDLQFPHHENEIAQSEAHNHAPFANYWMHNGFINIDNEKMSKSLGNFILV
                     HDIIKEVDPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATN
                     IENQQTYIDQIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDK
                     FKAVYQIFSDVLGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQ
                     NIILEDTPQGVRFKRG"
     gene            16736..17140
                     /locus_tag="O6Y56_000577"
     CDS             16736..17140
                     /locus_tag="O6Y56_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mini-ribonuclease 3"
                     /protein_id="HDB5573868.1"
                     /translation="MDNQQDNHIKLLNPLTLAYMGDAVLDQYVRTYIVLKLKSKPNKL
                     HQMSKKYVSAKSQAQTLEYLMEQEWFTNEEMDILKRGRNAKSHTKAKNTDVQTYRKSS
                     AIEAVIGFLYLAKREERLEALLNKIITIVNER"
     gene            17148..17894
                     /gene="rlmB"
                     /locus_tag="O6Y56_000578"
     CDS             17148..17894
                     /gene="rlmB"
                     /locus_tag="O6Y56_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDB5573869.1"
                     /translation="MEDTVIVGRHAVREAIITGHPINKILIQEGIKNQQINEILKNAK
                     DQKIIVQTVPKSKLDFLANAPHQGVAALIAPYEYADFDQFLKQQKEKEGLSTVLILDG
                     LEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNLAKT
                     IDELKDNGFWVAGTEANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKIPM
                     VGHVNSLNASVAASLMMYEVFRKRHDVGEI"
     gene            17894..18418
                     /locus_tag="O6Y56_000579"
     CDS             17894..18418
                     /locus_tag="O6Y56_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HDB5573870.1"
                     /translation="MKERYLIIDGYNMIGQSPTLSAIAKENLEEARMQLIDAIANYNA
                     VISDEIICVFDAYDQSGVEREYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHIT
                     VVTSDMSEQHAIFGSGAYRISSREMWRDLKENEIDVSKSLDDISENKPRTRIPLSSEI
                     LAEFEKIRRGHHKK"
     gene            18499..19068
                     /locus_tag="O6Y56_000580"
     CDS             18499..19068
                     /locus_tag="O6Y56_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HDB5573871.1"
                     /translation="MKYDLTTQDSTIKRNNAINDKDFEKLVMDLQPLIIRRIKTFGFN
                     HYDLEDLYQEILIRMYRSVQTFDFSGEQPFTNYVQCLITSVKYDYLRKYLATNKRIDN
                     LINEYRVTYPCAIKRYDVENNYLNKLAIKELIRQFKYLSAFEKDVMYLMCEQYKPREI
                     AQLMHVKEKVIYNAIQRCKNKIKRYFKMI"
     gene            19183..19326
                     /gene="rpmG"
                     /locus_tag="O6Y56_000581"
     CDS             19183..19326
                     /gene="rpmG"
                     /locus_tag="O6Y56_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002451211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDB5573872.1"
                     /translation="MRKIPLNCEACGNRNYNVPKQEGSATRLTLKKYCPKCNAHTIHK
                     ESK"
     gene            19382..19564
                     /gene="secE"
                     /locus_tag="O6Y56_000582"
     CDS             19382..19564
                     /gene="secE"
                     /locus_tag="O6Y56_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499089.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDB5573873.1"
                     /translation="MAKKESFFKGVKSEMEKTSWPTKEELFKYTVIVVSTVIFFLVFF
                     YALDLGITALKNLLFG"
     gene            19577..20125
                     /gene="nusG"
                     /locus_tag="O6Y56_000583"
     CDS             19577..20125
                     /gene="nusG"
                     /locus_tag="O6Y56_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001832303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDB5573874.1"
                     /translation="MSEEVGAKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVV
                     IPEEEETQVKDGKAKTTVKKTFPGYVLVELIMTDESWYVVRNTPGVTGFVGSAGAGSK
                     PNPLLPEEVRFILKQMGLKEKTIDVELEVGEQVRIKSGPFANQVGEVQEIETDKFKLT
                     VLVDMFGRETPVEVEFDQIEKL"
     gene            20306..20728
                     /gene="rplK"
                     /locus_tag="O6Y56_000584"
     CDS             20306..20728
                     /gene="rplK"
                     /locus_tag="O6Y56_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012664221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDB5573875.1"
                     /translation="MAKKVDKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNA
                     RTQDQAGLIIPVEISVYEDRSFTFITKTPPAPVLLKKAAGIEKGSGEPNKTKVATVTK
                     DQVREIANSKMQDLNAADEEAAMRIIEGTARSMGIVVE"
     gene            20936..21628
                     /gene="rplA"
                     /locus_tag="O6Y56_000585"
     CDS             20936..21628
                     /gene="rplA"
                     /locus_tag="O6Y56_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDB5573876.1"
                     /translation="MAKKGKKYQEAASKVDRTQHYSVEEAIKLAKETSIANFDASVEV
                     AFRLGIDTRKNDQQIRGAVVLPNGTGKSQSVLVFAKGDKIAEAEAAGADYVGEAEYVQ
                     KIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGK
                     VEYRAEKAGIVHASIGKVSFTDEQLIENFNTLQDVLAKAKPSSAKGTYFKSVAVTTTM
                     GPGVKIDTASFK"
     misc_feature    21716..21862
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00557"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L10 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00557"
     gene            21900..22400
                     /locus_tag="O6Y56_000586"
     CDS             21900..22400
                     /locus_tag="O6Y56_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDB5573877.1"
                     /translation="MSAIIEAKKQLVDEIAEVLSNSVSTVIVDYRGLTVAEVTDLRSQ
                     LREAGVEYKVYKNTMVRRAAEKAGIEGLDEFLTGPTAIATSSEDAVAAAKVISGFAKD
                     HEALEIKSGVMEGNVITAEEVKTVGSLPSHDGLVSMLLSVLQAPVRNFAYAVKAIGEQ
                     KEENAE"
     gene            22443..22811
                     /gene="rplL"
                     /locus_tag="O6Y56_000587"
     CDS             22443..22811
                     /gene="rplL"
                     /locus_tag="O6Y56_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001273587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDB5573878.1"
                     /translation="MANHEQIIEAIKEMSVLELNDLVKAIEEEFGVTAAAPVAVAGAA
                     GGADAAAEKTEFDVELTSAGSSKIKVVKAVKEATGLGLKDAKELVDGAPKVIKEALPK
                     EEAEKLKEQLEEVGATVELK"
     gene            22986..23594
                     /locus_tag="O6Y56_000588"
     CDS             22986..23594
                     /locus_tag="O6Y56_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDB5573879.1"
                     /translation="MSHYYDEDPSVISNEQRIQYQLKHHKIDLITDNGVFSKDKVDYG
                     SDVLVQTFLKTHPPGPSKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVEK
                     NKKLNGIDNVIVKESDALSAVEDKSFDFILTNPPIRAGKETVHRIFEQALHRLESNGE
                     LFVVIQKKQGMPSAKKRMNELFGNVEVVNKDKGYYILRSIKA"
     gene            23809..27360
                     /gene="rpoB"
                     /locus_tag="O6Y56_000589"
     CDS             23809..27360
                     /gene="rpoB"
                     /locus_tag="O6Y56_000589"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499096.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDB5573880.1"
                     /translation="MAGQVVQYGRHRKRRNYARISEVLELPNLIEIQTKSYEWFLREG
                     LIEMFRDISPIEDFTGNLSLEFVDYRLGEPKYDLEESKNRDATYAAPLRVKVRLIIKE
                     TGEVKEQEVFMGDFPLMTDTGTFVINGAERVIVSQLVRSPSVYFNEKIDKNGRENYDA
                     TIIPNRGAWLEYETDAKDVVYVRIDRTRKLPLTVLLRALGFSSDQEIVDLLGDNEYLR
                     NTLEKDGTENTEQALLEIYERLRPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKTN
                     KKLHLKHRLFNQKLAEPIVNTETGEIVVEEGTVLDRRKIDEIMDVLESNANSEVFELH
                     GSVIDEPVEIQSIKVYVPNDDEGRTTTVIGNAFPDSEVKCITPADIIASMSYFFNLLS
                     GIGYTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTESITPQQLINI
                     RPVIASIKEFFGSSQLSQFMDQANPLAELTHKRRLSALGPGGLTRERAQMEVRDVHYS
                     HYGRMCPIETPEGPNIGLINSLSSYARVNEFGFIETPYRKVDLDTHAITDQIDYLTAD
                     EEDSYVVAQANSKLDENGRFMDDEVVCRFRGNNTVMAKEKMDYMDVSPKQVVSAATAC
                     IPFLENDDSNRALMGANMQRQAVPLMNPEAPFVGTGMEHVAARDSGAAITAKHRGRVE
                     HVESNEILVRRLVEENGVEHEGELDRYPLAKFKRSNSGTCYNQRPIVAVGDVVEYNEI
                     LADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERLVKDDVYTSIHIEEYESEA
                     RDTKLGPEEITRDIPNVSESALKNLDDRGIVYIGAEVKDGDILVGKVTPKGVTELTAE
                     ERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREEGDDTLSPGVNQLVRVYIV
                     QKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGRPIDIMLNPLGVPSRMNIGQVL
                     ELHLGMAAKNLGIHVASPVFDGANDDDVWSTIEEAGMARDGKTVLYDGRTGEPFDNRI
                     SVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGA
                     AYTLQEILTYKSDDTVGRVKTYEAIVKGENISRPSVPESFRVLMKELQSLGLDVKVMD
                     EQDNEIEMTDVDDDDVVERKVDLQQNDAPETQKEVTD"
     gene            27524..31120
                     /gene="rpoC"
                     /locus_tag="O6Y56_000590"
     CDS             27524..31120
                     /gene="rpoC"
                     /locus_tag="O6Y56_000590"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDB5573881.1"
                     /translation="MKIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFG
                     PTKDWECSCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIP
                     SRMGLLLDMSPRALEEVIYFASYVVVDPGPTGLEKKTLLSEAEFRDYYDKYPGQFVAK
                     MGAEGIKDLLEEIDLDEELKLLRDELESATGQRLTRAIKRLEVVESFRNSGNKPSWMI
                     LDVLPIIPPEIRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEK
                     RMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSV
                     IAVGPSLKMYQCGLPKEMALELFKPFVMKELVQREIATNIKNAKSKIERMDDEVWDVL
                     EEVIREHPVLLNRAPTLHRLGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHV
                     PLSKEAQAEARMLMLAAQNILNPKDGKPVVTPSQDMVLGNYYLTLERKDAVNTGAIFN
                     NTNEVLKAYANGFVHLHTRIGVHASSFNNPTFTEEQNKKILATSVGKIIFNEIIPDSF
                     AYINEPTQENLERKTPNRYFIDPTTLGEGGLKEYFENEELIEPFNKKFLGNIIAEVFN
                     RFSITDTSMMLDRMKDLGFKFSSKAGITVGVADIVVLPDKQQILDEHEKLVDRITKQF
                     NRGLITEEERYNAVVEIWTDAKDQIQGELMQSLDKTNPIFMMSDSGARGNASNFTQLA
                     GMRGLMAAPSGKIIELPITSSFREGLTVLEYFISTHGARKGLADTALKTADSGYLTRR
                     LVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMIEPFIERIEGRYSKETIRHPETDEVI
                     IRPDELITPEIAKKITDAGIEQMYIRSAFTCNARHGVCEKCYGKNLATGEKVEVGEAV
                     GTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRIQEIFEARNPKGQAVITEIEGV
                     VEDIKLAKDRQQEIVVKGANETRSYLASGTSRIIVEIGQPVQRGEVLTEGSIEPKNYL
                     SVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLRKVRIIEAGDTKLLPGSL
                     VDIHNFTDANREAFKHRKRPATAKPVLLGITKASLETESFLSAASFQETTRVLTDAAI
                     KGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVKYEKTAKPVAEVESQTEVTE"
     gene            31257..31511
                     /locus_tag="O6Y56_000591"
     CDS             31257..31511
                     /locus_tag="O6Y56_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal L7Ae/L30e/S12e/Gadd45 family protein"
                     /protein_id="HDB5573882.1"
                     /translation="MSKEKVARFNKQHFVVGLKETLKALKKDQVTSLIIAEDVEVYLM
                     TRVLSQINQKNIPVSFFKSKHALGKHVGINVNATIVALIK"
     gene            31609..32022
                     /gene="rpsL"
                     /locus_tag="O6Y56_000592"
     CDS             31609..32022
                     /gene="rpsL"
                     /locus_tag="O6Y56_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001142337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDB5573883.1"
                     /translation="MPTINQLVRKPRQSKIKKSDSPALNKGFNSKKKKFTDLNSPQKR
                     GVCTRVGTMTPKKPNSALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVKD
                     LPGVRYHIVRGALDTSGVDGRRQGRSLYGTKKPKN"
     gene            32088..32558
                     /gene="rpsG"
                     /locus_tag="O6Y56_000593"
     CDS             32088..32558
                     /gene="rpsG"
                     /locus_tag="O6Y56_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013054923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDB5573884.1"
                     /translation="MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILY
                     SAFDLVEQRSGRDALEVFEEAINNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLR
                     WLVNYARLRGEKTMEDRLANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW"
     gene            32681..34762
                     /gene="fusA"
                     /locus_tag="O6Y56_000594"
     CDS             32681..34762
                     /gene="fusA"
                     /locus_tag="O6Y56_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDB5573885.1"
                     /translation="MAREFSLEKTRNIGIMAHIDAGKTTTTERILYYTGRIHKIGETH
                     EGASQMDWMEQEQDRGITITSAATTAAWEGHRVNIIDTPGHVDFTVEVERSLRVLDGA
                     VTVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDKLGANFEYSVSTLHDRLQANAA
                     PIQLPIGAEDEFEAIIDLVEMKCFKYTNDLGTEIEEIEIPEDHLDRAEEARASLIEAV
                     AETSDELMEKYLGDEEISVSELKEAIRQATTNVEFYPVLCGTAFKNKGVQLMLDAVID
                     YLPSPLDVKPIIGHRASNPEEEVIAKADDSAEFAALAFKVMTDPYVGKLTFFRVYSGT
                     MTSGSYVKNSTKGKRERVGRLLQMHANSRQEIDTVYSGDIAAAVGLKDTGTGDTLCGE
                     KNDIILESMEFPEPVIHLSVEPKSKADQDKMTQALVKLQEEDPTFHAHTDEETGQVII
                     GGMGELHLDILVDRMKKEFNVECNVGAPMVSYRETFKSSAQVQGKFSRQSGGRGQYGD
                     VHIEFTPNETGAGFEFENAIVGGVVPREYIPSVEAGLKDAMENGVLAGYPLIDVKAKL
                     YDGSYHDVDSSEMAFKIAASLALKEAAKKCDPVILEPMMKVTIEMPEEYMGDIMGDVT
                     SRRGRVDGMEPRGNAQVVNAYVPLSEMFGYATSLRSNTQGRGTYTMYFDHYAEVPKSI
                     AEDIIKKNKGE"
BASE COUNT        12606 a         5094 c         6817 g        10457 t
ORIGIN      
        1 cttagcgagg atggtagcca acttacgttc cgctagagta gaactggaaa tgataattta
       61 ataatgtaca ctttcgattg tctaagtatg tacaacttta attttgtgtt tatataaatt
      121 taaaatgata tcatcgaaaa caaaatattg tataaataga gaagagcagt aagacggtat
      181 ctaattgaaa atgatcttac tgctctttta tatactttat tgaaatacaa agaggaaatt
      241 aattattata caatagacaa gctattgcat aagtaacact aacttttatc aaagaagtgt
      301 tactttataa ttaatgattt tattagagcg tctacatgcg gttttaaagc atcatcgtct
      361 ataccgccaa agcctaatat aaatttaggg gttttcttat agtcttgatc atcatcgaaa
      421 ttataaactt gtaattttaa gtttactttg tttgctctat caagacactt ttgtaatgtt
      481 aatccatttt ttactgtaat tgtaaaatgc atacctgttt cagcaccttg aatatcaagc
      541 tgctctttgt aaggcttcaa tctatttaaa atataggtta gttttctacg ataaattcgt
      601 ctcattttat ttaaatgtct ttcaaaacca ccggaagata taaacattgc aataagattt
      661 tgcatatgaa caggtacagt gttgccttca atgtgatttt gagaatgata ttttttcatt
      721 atagaatagg gtaacaccat atatgcaaca cgacagctag gaaaaataga ctttgaaaat
      781 gtactgatat aaatcacttt ttctcctctt gaatatagac cttgaattgc tggaatgggt
      841 ttaccgaaat atctaaactc ggaatcataa tcatcttcta taataaatcg ttcttctttt
      901 tcttgagccc attgtattaa ttgagttcgc ttttttaagt ccattacata tccagttgga
      961 aattgatggg aaggcgttat atatactata tttttttgtg atttaataac ttcatctacg
     1021 tttattccat tatcttcaac ttcaatttgt tcatattcaa cttgtttttt atctaaaata
     1081 tttttgattg gtggataact aggtttttcg ataataaacg ttgaagtata aagtaaatcg
     1141 actaattgat ttactaattg ttcggtagat gagccaatta taatttgatt aggatcacaa
     1201 attacgccac gattagtaaa taaataaaat gccagttgaa accgcaaatg taattctcct
     1261 tgaaaatggc ctctaagtaa tttatttgaa tgggttttat cataaagatc ttttgaatac
     1321 tttctgaaaa gttctattgg gaaatgcttc gtgtctattt catctaaatt aaaagcgtaa
     1381 tcataagttt catcactagt ttttggttta tatgaatcat catcaaaaag agaatggata
     1441 ggttgagtat ttaaaattgt taaagattca atttcagata cataataacc agagcgaggt
     1501 ctcgaatata tgtatccctc gtctaataat agttgataag catgctctac tgttgtttgg
     1561 ctaatagata aatgtttgct taattgcctc tttgaataaa acttatcacc ttcttgaaat
     1621 tgaccttcaa ttatttgttt ttttaatttt tcataaagtt gatggtataa agtgtttttc
     1681 atttttaaaa ctgacctctt aattttatat tattttgcac ctttttaaat atcagtttat
     1741 acattacaat gaatttaatc aacttgaaaa ggggttttat ataaaatgag taaaataatt
     1801 ggatcagaca gagtcaaaag aggtatggct gaaatgcaaa aaggcggcgt tatcatggat
     1861 gtcgttaatg ctgagcaagc aagaattgcg gaagaagcag gtgcggtagc agtcatggct
     1921 ttagagcgtg taccttctga tattagagca gctggtggcg ttgcacgtat ggcaaaccct
     1981 aaaattgtag aagaagtaat gaatgctgtt tcaattcctg taatggctaa agcacgtatt
     2041 ggtcatatta cagaagcaag agtattagaa gctatgggtg ttgactatat tgatgaatca
     2101 gaagtattaa caccagcaga tgaggaatat cacttaagaa aagatcaatt tacagtgcca
     2161 tttgtatgtg gttgtcgtaa tttaggtgaa gctgcacgaa gaatcggtga aggtgctgct
     2221 atgttacgta ctaaaggtga accaggtaca ggtaatattg ttgaagctgt aagacatatg
     2281 agacaagtta attctgaagt tagtcgattg actgtaatga atgatgatga gattatgact
     2341 tttgcgaaag atatcggtgc gccttatgaa attttaaaac aaattaaaga caatggtcgt
     2401 ttaccggtag ttaactttgc agctggtggc gttgcgactc ctcaagatgc tgctttaatg
     2461 atggaattag gtgccgacgg tgtattcgtt ggatcaggta tttttaaatc agaagatcca
     2521 gaaaaatttg ctaaagcaat tgttcaagca acaacacatt accaagacta tgaactaatt
     2581 ggaagattag caagtgaact tggcactgct atgaaaggtt tagatatcaa tcaattatca
     2641 ttagaagaac gtatgcaaga gcgtggttgg taagatatga aaataggtgt attagcatta
     2701 caaggtgcag tacgtgaaca tattagacat attgaattaa gtggtcatga aggtattgca
     2761 gttaaaaaag ttgaacaatt agaagaaatc gagggcttaa tattacctgg tggcgagtct
     2821 acaacgttac gtcgattaat gaatttatat ggatttaaag aggctttaca aaattcaact
     2881 ttacctatgt ttggtacatg cgcaggatta atagttctag cgcaagatat agttggtgaa
     2941 gaaggatacc ttaacaagtt gaatattact gtacaacgaa actcattcgg tagacaagtt
     3001 gacagctttg aaacagaatt agatattaaa ggtatcgcta cagatattga aggtgtcttt
     3061 ataagagcgc cacatattga aaaagtaggt caaggcgtag atatcctatg taaggttaat
     3121 gagaaaattg tagctgtcca gcaaggtaaa tatttaggcg tatcattcca tcctgaatta
     3181 acagatgact atagagtaac tgattacttt attaatcata ttgtaaaaaa agcatagctt
     3241 aatgtatgct aaatcaacga attattgata tttatagatt tgttgagaag aaaataactc
     3301 cttcaaactt agctttggag gagttatttt ttatgtcaaa attaaaaatg atagaaaata
     3361 aagatataca taagaaaaaa ccccttcaaa gagactgaga atagtcaaaa ttttgaaggg
     3421 gttaattcga tgttgatgta tttgttaaat aaagaatcca gcgattgcag ctgaaatgaa
     3481 agatactagt gttgcaccga ataataattt caaaccaaag cgggcaactg tatctccttt
     3541 tttgtcatta agtgatttaa tcgcacctga aataatacca atagagctaa agttagcaaa
     3601 tgatactaag aatacagatg taacaccttt tgcgtgttca gataaatcac taagtttacc
     3661 aagtgcttgc attgctacaa attcgttaga taatagtttt gtcgccataa ctgaaccggc
     3721 ttgaactgca tcttgccaag gcacaccgac taagaatgca aatggtgcaa agacaaaacc
     3781 aattaatgtt tggaaatccc aagaaatagc gccacctgaa actgtactaa agatattgct
     3841 tacaattcca tttaatagag cgataatggc aatgtatccg attaacattg cgcctacaat
     3901 gacagctact ttaaatccat ctaaaatata ttctcctagc atttcgaaga atgattgttg
     3961 tctttcttca gtttcttcaa ctaataattt gtcatcttct tcattaactt tataagggtt
     4021 aataattgaa gcgatgatga aaccaccaaa taagtttaag acaacagccg ttacaacata
     4081 tttaggttca attaaggtaa agtatgcacc gataattgaa gcagaaacag tcgacattgc
     4141 tgaagctgtt aatgtgtata aacgttgctt aggtatgtat ggtaattgtt ttttaattga
     4201 aataaatact tcagattgtc ccaaaattgc tgcagcaact gcattgtatg attctaaacg
     4261 tcccatacca ttaattttag aaattaagaa tcctaaaaca ttaatgatta aaggtaaaat
     4321 ctttgtgtat tgaaggatac cgataatcgc tgaaataaat acgataggta ataatacact
     4381 gaagaagaat ggtggttgct taggatcgat atattgaata ccaccgaata caaagttaac
     4441 accatctgca gcttttaata ataagtagtt aaaaccgttt gaaataccac caataacctt
     4501 gattcccatt gtagttttaa gcaagataaa tgcaaagata agctgaattg caagtaaaat
     4561 tcctacatat ttccagcgaa tatttttcct gtctgagcta aatagaaacg caagtgccaa
     4621 aaagaagata attccgataa tcccaattag aatatgcata tatttctcat tcctttagtt
     4681 ttttctacaa tctatcatac aataaaatgg aagggctaac atcataaatt tttgaaaata
     4741 taaaaacaaa ttaattgaaa aaggtcaaaa taggtcatat aatatagtca aagaaggtca
     4801 aaaaggggtg atatacatgc acaatatgtc tgacatcata gaacaataca tcaaacgttt
     4861 atttgaagag tcgaatgagg atgtcgtcga aattcagaga gcgaatatcg cacagcgttt
     4921 tgattgcgta ccatcacaat taaactatgt aatcaaaaca cgattcacta atgaacatgg
     4981 ttatgaaatc gaaagtaaac gtggtggtgg tggttacatc cgaatcacta aaattgaaaa
     5041 taaagatgca acaggttata ttaatcattt gcttcagttg attggacctt ctatttctca
     5101 acaacaagct tattatatta ttgatgggct tttagataaa atgttaataa atgaacgtga
     5161 agctaaaatg attcaagcag ttattgatag agaaacgcta tcaatggata tggtttctag
     5221 agatattatt agagcaaata ttttaaaacg tttgttacct gttataaatt attactaaat
     5281 gaaatgaggt gttgaagtgc tttgtgaaaa ttgtcaactt aatgaagcgg aattaaaagt
     5341 taaagttaca agtaaaaata aaacagaaga aaaaatggtg tgtcaaactt gtgctgaggg
     5401 gcaccatccg tggaatcaag ctaatgaaca acctgaatat caagaacatc aagataattt
     5461 cgaagaagca tttgttgtta agcaaatttt acaacattta gctacgaaac atggcattaa
     5521 ttttcaagaa gtagcgttta aagaagaaaa acgttgccca tcatgtcata tgactttgaa
     5581 agatattgca catgttggta aatttgggtg tgctaattgt tatgcaacat ttaaagatga
     5641 catcattgat atcgtccgca gagttcaagg tggacaattt gagcacgttg gaaagacacc
     5701 acattcttca cataaaaaga tagctttaaa gcgaaaaatt gaagaaaaga atgaatattt
     5761 aaaaaaactt attgaaatcc aagattttga ggaagcagcc attgttagag atgaaattaa
     5821 agcactaaaa gctgagagtg aggtgcaaca tgatgacgca taatattcat gataatatca
     5881 gccaatggat gaaaagtaat gaagaaacac caattgttat gtcttctaga attcggttag
     5941 cgcgtaattt agaaaatcat gtgcatccac taatgtatgc tactgaaaat gatggattta
     6001 gagttataaa tgaggtacaa gatgccttgc caaattttga attaatgcgt cttgatcaaa
     6061 tggatcaaca aagtaaaatg aaaatggttg caaagcattt gattagtcct gaactaataa
     6121 aacaaccagc agccgcagta ttagtgaatg atgatgaatc tttaagtgtc atgataaatg
     6181 aagaggatca tattcgtatt caagctatgg gaactgacac gacattacag gctttatata
     6241 atcaagcttc atcaattgat gatgaattag atcgaagcct tgatataagt tatgatgaac
     6301 aacttggtta tttaactaca tgtcctacca atataggtac tggtatgaga gcaagcgtga
     6361 tgctacattt accaggtcta tctattatga aaagaatgac acggattgct caaaccatta
     6421 atcgttttgg atatacaatc agaggtattt acggtgaagg ttcgcaagtt tatggacata
     6481 cttatcaagt atccaaccaa cttacacttg gtaaatctga gttagaaatc atagaaacat
     6541 taacagaagt tgttaatcaa atcattcatg aagaaaaaca aatacgacaa aagttagaca
     6601 cttataatca attagaaaca caagaccgtg tttttcgctc gctaggtatt ttacaaaact
     6661 gtagaatgat aactatggaa gaggcttctt atagattaag cgaagttaaa cttggtatag
     6721 atttaaatta cattgaatta caaaacttta aatttaatga attgatggta gctatacaga
     6781 caccattttt attagatgaa gaagatgaca aatctgtaaa agaaaaacga gcagatatac
     6841 taagagaaca tataaagtag gaggtcatta tttatgttat ttggtagatt aactgaacgt
     6901 gcacagcgcg tattagcaca tgcacaagaa gaagcaattc gtttaaatca ttcaaatata
     6961 ggaacagaac acctattatt ggggttaatg aaagaacctg aaggaattgc tgcaaaagta
     7021 ttagaaagtt ttaatatcac tgaagataaa gtaattgaag aagttgaaaa attaattgga
     7081 catggtcaag atcatgttgg tacattgcat tatacaccta gagctaaaaa agtcattgaa
     7141 ttatcgatgg atgaagctag aaaattacat cacaattttg ttggaacgga acatatttta
     7201 ttaggcttga ttcgtgaaaa tgaaggtgtt gcagcaagag tttttgcaaa tctagattta
     7261 aatattacta aagcacgtgc acaagttgtg aaagctttag gaaaccctga aatgagtaat
     7321 aaaaatgcac aagctagtaa gtcaaataat actccaactt tagatagttt agctcgtgac
     7381 ttaacagtca ttgccaaaga cggtacatta gatcctgtta taggacgtga taaagaaatt
     7441 acacgtgtaa ttgaagtgtt aagtagacgt acgaaaaaca atcctgtact tattggagaa
     7501 ccaggtgttg gtaaaactgc tattgctgaa ggtttagcgc aagctatagt gaataatgag
     7561 gtgccagaga cattaaaaga taagcgtgtt atgtctttag atatgggaac agtagttgca
     7621 ggtactaaat atcgtggtga atttgaagag cgtctgaaaa aggttatgga agaaatccaa
     7681 caagcaggta atgtcatcct atttattgat gagttgcata ctttagtcgg tgctggtggt
     7741 gctgaaggtg ctatcgatgc ttcgaatatt ttgaaaccgg cattagcacg tggtgaatta
     7801 caatgtattg gtgctactac attagatgaa tatcgcaaaa atattgaaaa agacgcggct
     7861 ttagaacgtc gtttccaacc tgtacaagtt gatgaacctt cagtagtaga tacagttgct
     7921 attttaaaag gattaagaga tcgttacgaa gcacaccatc gtattaatat ttcagacgaa
     7981 gctattgaag cggctgttaa attaagtaac agatacgttt cagatcgttt cttaccagat
     8041 aaagcaattg atttaattga tgaagcaagt tctaaagtaa gacttaagag tcatacgaca
     8101 cctaataatt taaaagaaat tgaacaagaa attgaaaaag ttaaaaatga aaaagatgcc
     8161 gcagtacatg ctcaagagtt tgaaaatgct gctaatctgc gtgataaaca aacaaaactt
     8221 gaaaagcaat atgaagaagc taaaaatgaa tggaagaacg cacaaaatgg catgtcaact
     8281 tcattgtcag aagaagatat tgctgaagtc attgcaggat ggacaggtat cccattaact
     8341 aaaatcaatg aaacagaatc tgaaaaactt cttagtctag aagatacatt acatgagaga
     8401 gttattgggc aaaaagatgc tgttaattca atcagtaaag cggttagacg tgcccgtgca
     8461 gggttaaaag atcctaaacg accaattggt agctttatct tccttggacc aactggtgtt
     8521 ggtaaaactg aattagctag agccttagct gaatcaatgt tcggcgatga tgatgcgatg
     8581 attcgtgtag acatgagtga atttatggaa aaacacgcag tgagccgatt agttggtgct
     8641 cctccaggat atgttggtca tgatgatggt ggacaattaa ctgaaaaagt tagacgtaaa
     8701 ccatattctg taattttatt tgatgaaatt gaaaaagcac atccagatgt atttaatatt
     8761 ctattacaag ttttagatga cggacatttg acagatacaa aaggacgtac agttgatttc
     8821 agaaatacaa ttatcataat gacatcaaac gttggagcac aagaattaca agatcaacga
     8881 tttgctggat tcggtggttc aagtgatgga caagattatg aaacaattcg aaaaacgatg
     8941 ttaaaagaat taaaaaattc attccgtcca gaatttttaa accgtgtaga tgatatcatt
     9001 gtattccata aactaacaaa agaagaatta aaagaaattg taacaatgat ggttaataaa
     9061 ttaacaaatc gattatccga acaaaacata aatattattg ttactgataa agcgaaagac
     9121 aaaatcgcag aagaaggata tgatccagaa tatggtgcaa gaccattaat tagagcgata
     9181 caaaaaacta tcgaagataa tttaagtgaa ttaatattag atggtaatca aattgaaggt
     9241 aagaaagtta cagtagatca tgatggtaaa gagtttaaat atgacattgc tgaacaaact
     9301 tcagaaacta aaacaccatc gcaagcataa ttataaaaca gtccaaaaca aattaaagtt
     9361 ttgggctgtt tttttagtat cattgaacta tagaaattcg tgaaagtatc catcaacgaa
     9421 acaatctaat aaaataatca tcaaaggata gttaagaatt atatgaaaca agttaatgag
     9481 cctacagcga tagcataaag gtatgaattt tttataaagg ttttttgttt gaagatacta
     9541 gcaacttacg tcaaaataaa ataggtctat ataatattgt gataaatcta gagaaaagag
     9601 tttactaaga aattattaag attttatctt tgaaagatac cgactatcaa catgatgtaa
     9661 gtttatttta taatattcat aaaaaataaa tctgataaaa cagtttgcgt tagtagtcat
     9721 gttaaaatac aaacaaatgt aactcacatt taatttgtca taaagggaat gtgcgtttaa
     9781 aatagatttg ttcaaaggaa agtggaggtg caattttggc caagaaaaaa gtgatttttg
     9841 aatgtatggc ttgtggttat caatctccta aatggatggg gaaatgtcct aattgtggcg
     9901 cttggaatca aatggaggaa attgttgaaa aagcagccaa tcctaaacat ggagtgaaaa
     9961 ccaaggaatt agcaggtaaa gtacaaaaat taaatagtat taaacatgaa acaacgccga
    10021 gagtgttaac agattcagca gaattcaacc gtgtattagg tggaggtatt gtgagcggat
    10081 cgttagtact tattggtggg gatccaggta ttggtaagtc aacgttactt ttacaaattt
    10141 gtgcatcgtt atctcaaaag aaaaaagtac tatatattac tggagaagaa tcgcttagtc
    10201 agactaaatt acgtgcagag cgattagatg aagattcaag tgaattgcaa gtattagctg
    10261 aaacagatct tgaagttatt tatcaaacag taaaagaaga acaacctgat ttattagtag
    10321 tggattcgat tcaaacaata tatcatcctg aaatcagctc tgcgccaggt tctgtttcac
    10381 aagttcgtga aagtacacaa agtttaatga atattgctaa acaaatgaac attgcaactt
    10441 ttatagtggg tcatgtaacg aaagaaggtc aaattgctgg cccaagattg ctagaacaca
    10501 tggttgatac tgtgctttat tttgaaggcg atgaacatca cgcatatcga attttgcgag
    10561 ctgttaaaaa ccgttttggt tcaacgaatg aaatgggaat cttcgaaatg aagcaaagtg
    10621 gattaaaagg tgtcaataat ccatctgaaa tgtttttaga agaacgttca acaaatgttc
    10681 caggttcaac aattgttgca accatggagg gaaccagacc acttttaata gaagttcaag
    10741 cgctggtaac tccaacgact tttaacaatc cgagacgaat ggcaacaggg attgatcata
    10801 atcgattaag tttgttgatg gctgttttgg aaaagaaaga aaattatcta ttacaacaac
    10861 aagatgctta tatcaaagta gctggcggtg taaagttaac ggagccagca gttgatttaa
    10921 gtgtaattgt agcaactgcg tctagcttta aagataaagc tgtcgacgga ttagattgct
    10981 atattggaga agttggttta acgggtgagg tacgtcgtgt atctcggata gaacaacgcg
    11041 tgcaagaggc tgcaaaacta ggtttcaaac gtgtaattat tcctaaaaat aatataggcg
    11101 gatggacata tcctgaaggt atacaagtaa taggtgtaac tactgtacat gaagcattgt
    11161 catttgctct tcattcataa aacatcaaga aaggaggaca ttgtgtgaat atcgttaaac
    11221 taatggttat tattatttac ttaattattg ggagcgcatt aggaataatt attattcctg
    11281 aaattgcaaa tgatcttgga ttacaaaact ccagcttttt aaaaaatcac tatgtagatg
    11341 gcattatcgg tagtattttt atgttcttaa tttttggtgt atttattaga cgagttacta
    11401 acgctataaa aggtttagaa cattttatta tgcgtagaag tgctgttgaa atactattcg
    11461 caacaatagg tttaataatc ggattactta tttctgttat ggtgtcgttt atattagaat
    11521 caattggcaa ctctattttt aatcatttca ttcctgtcat aattacgata ttactatgtt
    11581 atttcggttt ccaatttggc cttaaaaaac gagatgaaat gttaatgttt ttacctgaga
    11641 atatagcgcg ttccatgtca caacatacta aaagtgctac gccaaaaatt atcgacacaa
    11701 gcgcaattat tgatggtcgt attttagaag tcattcgttg cggttttatc gatggcaata
    11761 ttttaattcc acaaggtgtt attaatgaat tacaaattgt tgcagattca aatgacagtg
    11821 ttaaacgtga aaagggtaaa agaggcttag atattttaaa tgaattgtat gatttagatt
    11881 atcctacaaa agtcatacat ccgactaaat cacatagtga tattgatacg atgttattaa
    11941 agctagctaa acaatatcac tcaaatatta taacgacaga ctttaatttg aataaagttt
    12001 gtcatgtaca tggtatcaaa gcattaaatg ttaatgattt atcagaagca atcaaaccta
    12061 atgtacatca aggtgatcaa ctgcatattt tactgacaaa aatgggtaaa gagcctggtc
    12121 aggcagtagg atatctagat gatggtacga tggtagttgt tgataatgct aaaaatctta
    12181 ttggcagtca tgtcaattta gaagtagtca gcttattgca aacatcttca ggaagaattg
    12241 tttttgctaa aaaaatcgaa gatacagtat cattataaaa actgtagttg acgaaaataa
    12301 aatagatatt aaaaggtata tgaaatggcg aagtttgtaa tttgaagtat aactataaat
    12361 aaatgcaaaa catatcagtt atcaaaaaat gcaaatagtg ctaatatatc attgaaacaa
    12421 gttcattaag tgttaaattt tagatattaa taaagttatt cttatagcaa tcaagacata
    12481 caaaattaga atcaatttta acgtatttga atagttaatt tgaagtttaa ttttacagca
    12541 cataatattc atttttaagt cgttgaaatg cgtatgtagt gcagtcttga ttcttaggga
    12601 tagctttttt aaagtgttga aaaaacaact gctttctatt taaaatttaa gcatattacc
    12661 cagggaatta tgttatgatt aaacaatgaa attattttaa ggtcatgtta aaaagcattg
    12721 tttcgtttta acaataagac gagttacaca tttgttatga cggtcgaaga tagcaaatga
    12781 acaatttata tgaactaact tgaaaatttg atatttaatt taggagtgaa aaaaatgagc
    12841 gatcgtataa gagtaagata tgcaccaagt ccaactggtt atcttcatat tggtaatgca
    12901 agaacagcat tattcaatta cttgtatgct aaacattata acggagattt tgtgattcga
    12961 attgaagata ctgataaaaa acgtaattta gaagatggag aaacatcaca atttgataat
    13021 cttaaatggt taggattaga ttgggatgaa tctgtagata aagacaatgg ctacggacca
    13081 tatcgtcaat ctgaacgtca acatatctac caaccattaa tagatcagtt actagcagaa
    13141 gataaagcat ataaatgcta tatgacagaa gaagaattag aagctgaacg tgaagcgcaa
    13201 atcgctcgtg gtgaaatgcc tcgctatggt ggtcaacatg cgcatttgac tgaagaacaa
    13261 cgtcaacaat ttgaagcaga aggacgccaa ccatcaattc gtttccgagt acctcaaaac
    13321 caaacgtatt cttttgatga tatggtaaaa gggaatattt catttgattc aaatggtatt
    13381 ggtgactggg ttatcgttaa aaaagatggc attccaacgt acaattttgc agtagctata
    13441 gatgatcatt acatggaaat ttcagatgtt attcgtggtg atgatcatat ttcaaacacg
    13501 cctaaacaaa ttatgattta tgaagcattt ggctgggagc cacctcgttt tggtcatatg
    13561 tcattaattg ttaatgaaga acgtaaaaag ttaagtaaac gtgatgggca aattttacaa
    13621 tttattgagc aatatcgtga cttaggttat ttacctgaag cgttatttaa ttttattgcg
    13681 ttattaggtt ggtctcctga aggtgaagaa gaaatctttt ctaaagaaga atttatcaaa
    13741 atctttgatg aaaagcgttt gtcaaaatca ccagcatttt tcgataagca aaaattagca
    13801 tgggttaata accaatatat gaaacaaaaa gatactgaaa cagtattcca attagcatta
    13861 cctcatttaa ttaaagcgaa tttgattcct gaggtgccgt cagaagagga tttatcttgg
    13921 ggacgcaaat taattacgct ttatcaaaaa gaaatgagtt atgccggtga aattgttcct
    13981 ttatcagaaa tgttctttaa agaaatgcca gctcttggtg aagaagaaca acaagtgatc
    14041 aatggagagc aagtaccaga gttaatgacg cacttattca gtaaattaga agcacttgaa
    14101 ccatttgaag cggctgaaat taaaaagaca attaaagaag ttcaaaaaga aacaggaata
    14161 aaaggcaagc aattatttat gcctattcgt gttgctgtaa caggccaaat gcatggtcct
    14221 gaattaccaa atacaattga agtacttgga aaagaaaaag tgctaaaccg tttaaaacaa
    14281 tataagtaat gaaatagaca agatcaaggt agtatatact tgaattttat aacgtaacca
    14341 catatgataa agttgtatta acaaattaca acaatatgaa tagagtattt tatataaaac
    14401 gaaggattag taattaaatt tatacgatgc agagagtgta cggttgctgt gagtacaacg
    14461 tagaaattaa tgaatgcacc ttcgtaaaat gaattaaata tataatgaga gtgatgagca
    14521 ttaagttgac atagtttcct tgataatttg gaagcgcccg caatattatt aatgttattc
    14581 gctaaattca gagtggaacc gtgcggaagc gcctctaaca atacaatttg tatgttagtg
    14641 gtgctttttt gatatttaat ttcgcaggta cttcaattat gtatttacgt agttcaatca
    14701 ttgaggagga aatgatcttg ttaaaaagaa tgagagacga tataaaaatg gtatttgagc
    14761 aggatccagc ggcacgttca acattagaag tcattacaac gtatgcaggt ttacatgcag
    14821 tttggagtca tttgattgca cataagttat acaacaaaaa aaaatatgtt gcagcacgcg
    14881 cgatatctca aatttcaaga tttttcacag gtatagaaat ccatccaggt gctaaaattg
    14941 gaaagcgtct atttatagat catggtatgg gcgttgtaat aggagaaaca tgtacaattg
    15001 gtgataatgt gacaatctat caaggcgtga cacttggtgg gacagggaaa gaaagaggga
    15061 aaagacaccc agatatagga gacaatgttt taatagcagc gggtgcgaaa gttttaggaa
    15121 atattaaaat aaattcaaat gtaaatattg gtgcaaattc agttgtttta caatcagttc
    15181 caagttattc aacggttgtt ggtataccag gacatattgt taagcaagat ggtgttcgag
    15241 ttggaaaaac atttgatcat cgccatctac ctgatccaat ttatgaacaa attaagcatt
    15301 tagaacgaca acttgaaaag actaggaatg gagagattca agatgattac attatataat
    15361 acacttacac gtcaaaaaga agtgttcaag ccaatagaac caggaaaggt aaaaatgtat
    15421 gtatgtggtc ctacggtata taactacatt catattggta acgcaagacc agcaattaat
    15481 tatgacgtag tgagacgtta ctttgaatac caaggatata atgtagaata tgtatcaaat
    15541 tttacagatg tagatgataa attaattaaa cgttctcaag aattaaatca gtctgttccc
    15601 gaaattgcag aaaaatatat cgctgctttt catgaagatg ttggtgcttt aaatgttaga
    15661 aaagcgactt caaatccaag ggtaatggac catatggatg acattattca atttattaaa
    15721 aatttggttg atcaaggtta tgcatatgaa agtggtggcg atgtttactt tagaacacgt
    15781 aaatttgaag gttatggtaa attaagtcat caatccatag atgacttaaa agtgggtgct
    15841 cgtatagatg caggagagca taaggaagat gcacttgatt ttacattgtg gaaaaaagcg
    15901 aagcctggcg agattagttg ggatagccca tttggtgaag ggagaccagg atggcatatt
    15961 gaatgttctg taatggcatt tcatgagcta ggacctacaa ttgatataca tgcgggtggt
    16021 tcagatttac aatttccaca tcatgaaaat gaaatagcac aatcggaagc acataatcat
    16081 gcgccatttg ctaattattg gatgcataat ggtttcatta atattgataa tgaaaaaatg
    16141 agtaaatcac taggtaactt tattttagtt cacgatatta ttaaagaagt tgatccagat
    16201 gtactaagat tctttatgat tagcgtacat tatagaagtc caattaacta taatctagaa
    16261 ttggttgaat cagcacgtag tggactagag cgtattcgca atagttatca attaattgaa
    16321 gagcgcgcac aaattgctac taatattgaa aatcaacaga catatattga tcaaattgat
    16381 gcgattttaa atcgttttga aacagttatg aatgatgatt ttaatacagc taatgcaatt
    16441 acagcttggt atgatttagc aaaacttgcg aataaatatg tactagagaa tacaacatca
    16501 acagaagtaa ttgataaatt taaagcagtt tatcaaattt tcagcgatgt tttaggtgta
    16561 ccgttaaaat ctaaaaatgc agatgaatta ttggatgaag atgttgaaaa attaatcgaa
    16621 gagcgtaatg aagcaaggaa aaacaaagat tttgcacgag cagatgagat tcgagacatg
    16681 ctgaaatcac aaaacattat attagaagac acacctcaag gggttagatt taaacgtgga
    16741 taatcaacaa gataatcaca ttaaattatt gaatccattg accttagcat atatgggaga
    16801 cgcagtctta gatcaatatg tacgtacgta tatcgtttta aagcttaaaa gtaagcctaa
    16861 taaactacat caaatgtcta aaaaatatgt atctgccaaa agtcaggcgc aaacgttaga
    16921 atatttaatg gagcaagaat ggtttacaaa cgaagaaatg gatattttga agcgagggcg
    16981 taacgcgaaa agtcatacta aagctaaaaa cactgatgtt caaacatatc gtaaaagttc
    17041 agcgatagaa gcagtgatag gttttcttta tttagcaaaa agagaagaac gattagaggc
    17101 attattaaat aaaataataa caatagtaaa cgaaaggtag tgacaatgtg gaagatacgg
    17161 ttattgttgg taggcatgct gttagagaag cgattattac tgggcatccg ataaataaga
    17221 tattgattca agaaggtatt aaaaatcaac aaattaatga aattttaaaa aatgcaaaag
    17281 atcaaaaaat cattgttcaa actgtaccaa aatctaaatt agatttttta gcaaatgcac
    17341 cacatcaggg tgttgcagcg cttattgcac catatgaata tgctgacttc gatcaatttt
    17401 taaaacagca aaaagaaaaa gaaggtttat cgacagtact tatattagac ggcttagaag
    17461 acccgcataa cttgggatca attttaagaa cagcagatgc aacgggagtt gatggtgtta
    17521 ttattcctaa acgtcgttca gttacactaa cacaaacagt tgcaaaagcc tcaacaggtg
    17581 caattgaaca tgttccagtt attcgagtga caaatttagc taaaactatc gatgaactaa
    17641 aagataatgg tttttgggta gctggcactg aagctaataa tgcaacagat tatagaaatc
    17701 ttgaagcgga catgtcattg gctattgtaa ttggcagcga aggacagggt atgagtcgtc
    17761 tagtaagtga taaatgcgat ttctatatta agattccaat ggttggacat gtaaacagtt
    17821 tgaatgcttc ggttgcagca agtttaatga tgtacgaagt atttcgaaaa agacatgatg
    17881 ttggagaaat ataatgaaag aacgttactt aatcattgat ggatacaata tgataggaca
    17941 atcaccaacg ctaagcgcca ttgcaaaaga aaatttagaa gaagctagaa tgcaattaat
    18001 agatgcaatt gcaaattata atgctgttat ttcagatgaa attatttgtg ttttcgatgc
    18061 ttatgaccaa tcgggtgttg aaagagaata catgtatcat ggcgttaaaa cgatttttac
    18121 caaggaaaaa gaaacagctg atagtttcat agaacgttat gtctatgaac tttatgacaa
    18181 gcacactaag catattacag ttgtaacaag tgatatgagt gagcaacatg ctatctttgg
    18241 atcaggtgca tatagaatat catctcgtga aatgtggaga gatttaaaag aaaatgaaat
    18301 tgatgtgagt aaatcattag atgatataag tgaaaacaag ccaagaactc gaattccgtt
    18361 atcttctgaa atccttgcag aatttgaaaa aatacgaaga ggacatcata agaaatgaca
    18421 tttccgtcat cttgaaattt tgaatgtaac aatattaaac taaccttaaa ttttagatag
    18481 aaggggttag tttaatactt gaaatatgat ttgacaactc aagacagtac aatcaaacgt
    18541 aacaatgcaa taaatgataa agacttcgaa aagttagtaa tggatctaca accattaatt
    18601 attcgacgca tcaaaacatt tggatttaat cattatgatt tagaagactt atatcaagaa
    18661 atacttatac ggatgtatag gtcggtccaa acatttgatt ttagtggaga acagcctttc
    18721 acaaattatg ttcaatgttt aattacgtct gtaaagtatg attatttgag aaaatattta
    18781 gctacaaata aaagaataga taatttgatt aatgaatata gagttacgta tccatgtgca
    18841 ataaagcgtt atgatgttga aaacaattat ttgaataaat tagcaattaa agagttgatt
    18901 cgtcagttta agtatttgag tgcatttgaa aaagatgtca tgtatttaat gtgtgaacaa
    18961 tataagccga gagaaattgc tcaactgatg catgtaaaag agaaagtgat ttataatgcc
    19021 atacaacgat gtaaaaataa aataaagcgt tatttcaaaa tgatttgaaa agcgccttag
    19081 gacgtggatt gaattagaac gtgttacttc ttgatggttt gacatttgtt ataaatttta
    19141 tgtatagtat actggtatta taatgaataa aggtgaatta ttgtgaggaa aataccttta
    19201 aattgtgaag cttgtggcaa tagaaattat aatgttccta agcaagaagg ctcggcaaca
    19261 agattaacct taaagaaata ttgtccaaaa tgtaacgcgc acacaattca taaagaatcg
    19321 aaataaatac attcgaaata atactttgat aatatgttca aaggatttgg aggttgagca
    19381 gatggctaaa aaagaaagtt tctttaaagg cgttaagtct gaaatggaaa aaacaagttg
    19441 gccgacgaaa gaagagctat ttaaatatac tgtaattgta gtttctactg ttatattctt
    19501 cttagtcttt ttctatgcct tagatttagg aattacagca ttgaaaaatt tattatttgg
    19561 ttagaggagt gaagacatgt ctgaagaagt tggcgcaaag cgttggtatg cagtgcatac
    19621 atattctgga tatgaaaata aagttaaaaa gaatttagaa aaaagagtag aatctatgaa
    19681 tatgactgaa caaatcttta gagtagtcat accggaagaa gaagaaactc aagtaaaaga
    19741 tggcaaagct aaaacgactg ttaaaaaaac attccctgga tatgttttag tggaattaat
    19801 catgacagat gaatcatggt atgtggtaag aaatacacca ggcgttactg gttttgtagg
    19861 ttctgcaggt gcagggtcta agccaaatcc gttgttacca gaagaagttc gcttcatctt
    19921 aaaacaaatg ggtcttaaag aaaagactat cgatgttgaa ctcgaagttg gagagcaagt
    19981 tcgtattaaa tcaggtccat ttgcgaatca agttggtgaa gttcaagaaa ttgaaacaga
    20041 taagtttaag ctaacagtat tagtagatat gtttggccga gaaacaccag tagaagttga
    20101 attcgatcaa atagaaaagc tttaattaac aattaaagtt attaaactaa ccaaaagata
    20161 aaaaagagta ttgatttttt aattagaaaa gtgttaaaat tatgtggtcg cgcttttaga
    20221 gcgcccattt cgtcacgaaa tgttaagagt gggagggcaa aactgagccc tgtgaccaca
    20281 tcacgatatc aaggaggtgc acatcgtggc taaaaaagta gataaagttg ttaaattaca
    20341 aattcctgca ggtaaagcga atccagcacc accagttggt ccagcattag gtcaagcagg
    20401 tgtgaacatc atgggattct gtaaagagtt caatgcacgt actcaagatc aagcaggttt
    20461 aattattccg gtagaaatca gtgtttatga agatcgttca tttacattta ttacaaaaac
    20521 tccaccggct ccagtattac ttaaaaaagc agctggtatt gaaaaaggtt caggtgaacc
    20581 aaacaaaact aaagttgcta cagtaactaa agatcaagta cgcgaaattg ctaacagcaa
    20641 aatgcaagac ttaaacgctg ctgacgaaga agcagctatg cgtattatcg aaggtactgc
    20701 acgtagtatg ggtatcgttg tagaataatt ttacgaatat taaatttgat tacatgattt
    20761 aaacgatgaa gcagataaca gagataataa tgatgaatta taaatataat ctgaatgact
    20821 agattaatga ttgatttatt cataagatta attcttctgt tgtctgctct taacttgcat
    20881 ctagcaagta atgtgggagg aaattccgct aaaaccacta aaggaggaac tataaatggc
    20941 taaaaaaggt aaaaagtatc aagaagcagc tagtaaagtt gaccgtactc agcactacag
    21001 tgttgaagaa gcaattaaat tagctaaaga aacaagcatt gctaactttg acgcttctgt
    21061 tgaagttgca ttccgtttag gaattgatac acgtaaaaat gaccaacaaa tccgtggtgc
    21121 agttgtatta ccaaacggaa ctggtaaatc acaaagtgta ttagtattcg ctaaaggtga
    21181 caaaattgct gaagctgaag cagcaggtgc tgactatgta ggtgaagcag aatacgttca
    21241 aaaaatccaa caaggttggt tcgacttcga tgtagtagtt gctacaccag atatgatggg
    21301 tgaagttggt aaattaggtc gtgtattagg accaaaaggt ttaatgccaa accctaaaac
    21361 tggaactgta acaatggatg ttaaaaaagc tgttgaagaa atcaaagctg gtaaagtaga
    21421 ataccgtgct gaaaaagctg gtatcgtaca tgcatcaatt ggtaaagttt catttactga
    21481 tgaacaatta attgaaaact tcaatacttt acaagatgta ttagctaaag ctaaaccatc
    21541 atctgctaaa ggtacatact tcaaatctgt tgctgtaact acaacaatgg gtcctggagt
    21601 taaaattgat actgcaagtt tcaaataata aatgatataa acaattacag gctgaaagaa
    21661 atatctttca gtctgtaaaa atatattgac aatgagtaat ttccaagtta tattacttat
    21721 tgtgattatt ttacctaaga cagtaggagt tatttataac ttaaaactta tcctgccgag
    21781 gctaaaattg acttgaacgt gatgatctat gatctttcaa gcactttttg ccgtgggtag
    21841 aaagtgcttt ttttattaat tttaaaaaaa gcaccaaaaa tttaaatgga ggtgtctgaa
    21901 tgtctgctat cattgaagct aaaaaacaac tagttgatga aattgctgag gtactatcaa
    21961 attcagtttc aacagtaatc gttgactacc gtggattaac agtagctgaa gttactgact
    22021 tacgttcaca attacgtgaa gctggtgttg agtataaagt atacaaaaac actatggtac
    22081 gtcgtgcagc tgaaaaagct ggtatcgaag gcttagatga attcttaaca ggtcctactg
    22141 ctattgcaac ttcaagcgaa gatgctgtag ctgcagcgaa agtaatttct ggatttgcta
    22201 aagatcatga agcattagaa attaaatcag gcgttatgga aggcaatgtt attacagcag
    22261 aagaagttaa aactgttggt tcattacctt cacacgatgg tcttgtatct atgcttttat
    22321 cagtattaca agctcctgta cgcaacttcg cttatgcggt taaagctatt ggagaacaaa
    22381 aagaagaaaa cgctgaataa tttttagcgt aaaaaaatta aaaataatgg aggaattata
    22441 aaatggctaa tcatgaacaa atcattgaag cgattaaaga aatgtcagta ttagaattaa
    22501 acgacttagt aaaagcaatt gaagaagaat ttggtgtaac tgcagctgct ccagtagcag
    22561 tagcaggtgc agctggtggc gctgatgctg cagcagaaaa aactgaattt gacgttgagt
    22621 taacttcagc tggttcatct aaaatcaaag ttgttaaagc tgttaaagaa gcaactggtt
    22681 taggattaaa agatgctaaa gaattagtag acggagctcc taaagtaatc aaagaagctt
    22741 tacctaaaga agaagctgaa aaacttaaag aacaattaga agaagttgga gctactgtag
    22801 aattaaaata attcaagtat cttaaactta ataatcaaag ttttatagca agtattgcta
    22861 taatataatg attctttgag aagttaaaac cccgttattt tgataacggg gttttattca
    22921 tttaaagact gagtgaaatg ttataattat aatgacgagt tacaaagtga agatgaggtg
    22981 gaataatgag tcattattat gatgaagatc caagtgtaat tagcaatgaa caacgtattc
    23041 aatatcaatt aaaacatcat aaaattgatt taataactga taacggagtg ttttcgaaag
    23101 ataaagtaga ttatggttca gatgttcttg ttcaaacttt tttaaaaacg catccacctg
    23161 gtccaagtaa gcgaattgcc gatgttggtt gtggttacgg accaattggt ttgatgattg
    23221 ctaaagtatc accacatcat tcaattacaa tgctagatgt taatcacaga gcgctagcct
    23281 tagttgaaaa aaacaaaaaa ttaaacggta ttgataatgt gatcgtaaag gaaagtgatg
    23341 ctttgtctgc tgtggaagac aaaagttttg attttatttt aaccaatcca ccaataagag
    23401 cagggaaaga aaccgtgcat cgtatattcg agcaagcatt acatagatta gaatcgaacg
    23461 gtgaactatt cgttgtaatt cagaagaagc aaggtatgcc atctgcaaag aaaagaatga
    23521 atgaactttt tggaaatgta gaagtggtaa ataaagataa aggatattac attctgagaa
    23581 gtataaaagc ttgaaatgaa atggatattc tgttatagtt atataatgta aaaatttatg
    23641 ttcaataagt gtgtactttt acgttaaata gataagttaa ttaagaataa atatagaatc
    23701 gaaaatggtg tcatcattag tgttgccgtt ttctttttgt ctttttatta atatgcttat
    23761 ggtatttagc taaaagcgga tcacataatt tttgaggggt gaatctgttt ggcaggtcaa
    23821 gttgtccaat atggaagaca tcgtaaacgt agaaactacg cgagaatttc agaagtatta
    23881 gaattaccaa acttaataga aattcaaact aaatcttacg agtggttcct aagagaaggt
    23941 ttaatcgaaa tgtttagaga catttctcca attgaagatt ttactggtaa tttgtcatta
    24001 gagtttgtgg attaccgttt aggagaacca aaatatgatt tagaagaatc taaaaaccgt
    24061 gacgctactt atgctgcacc tcttcgtgta aaagtgcgtc taatcattaa agaaacagga
    24121 gaagttaaag aacaagaagt ctttatgggt gatttcccat taatgactga tacaggtacg
    24181 ttcgttatca atggtgcaga acgtgtaatc gtatctcaat tagttcgttc accatccgtt
    24241 tatttcaatg aaaaaatcga caaaaatggt cgtgaaaact atgatgcaac aattattcca
    24301 aaccgtggtg catggttaga atatgaaaca gatgctaaag atgttgtata cgtgcgtatt
    24361 gatagaacac gtaaactacc attaacagta ttgttacgtg cattaggttt ctcaagtgac
    24421 caagaaattg ttgacctttt aggtgacaat gaatatttac gtaatacttt agagaaagac
    24481 ggcactgaaa acactgaaca agcgttatta gaaatctatg aacgtttacg tccaggtgaa
    24541 ccaccaactg ttgaaaatgc taaaagtcta ttgtattcac gtttctttga tccaaaacgc
    24601 tatgacttag caagcgtggg tcgttataaa acaaacaaaa aattacattt aaaacatcgt
    24661 ttattcaatc aaaaattagc tgagccaatt gtgaatactg agactggtga aattgtagtt
    24721 gaagaaggta cagtgcttga tcgtcgtaaa atcgacgaaa tcatggatgt acttgaatca
    24781 aacgcaaaca gcgaagtgtt tgaattgcat ggtagcgtta tagacgagcc agtagaaatt
    24841 caatcaatta aagtatatgt tcctaacgat gatgaaggtc gtacgacaac tgtaattggt
    24901 aatgctttcc ctgactcaga agttaaatgt attacaccag cagatatcat tgcttcaatg
    24961 agttacttct ttaacttatt aagcggtatt ggatatacag atgatattga ccatttaggt
    25021 aaccgtcgtt tacgttctgt aggtgaatta ctacaaaacc aattccgtat cggtttatca
    25081 agaatggaaa gagttgtacg tgaaagaatg tcaattcaag atactgagtc tatcacacct
    25141 caacaattaa ttaatattcg acctgttatt gcatctatta aagaattctt tggtagctct
    25201 caattatcac aattcatgga ccaagcaaat ccattagctg agttaacgca taaacgtcgt
    25261 ctatcagcat taggacctgg tggtttaaca cgtgaacgtg ctcaaatgga agtacgtgac
    25321 gttcactact ctcactatgg ccgtatgtgt ccaattgaaa cacctgaggg accaaacatt
    25381 ggattgatta actcattatc aagttatgca cgtgtaaatg aattcggctt tattgaaaca
    25441 ccatatcgta aagttgattt agatacacat gctatcactg atcaaattga ctatttaaca
    25501 gctgacgaag aagatagcta tgttgtagca caagcaaact ctaaattaga tgaaaatggt
    25561 cgtttcatgg atgatgaagt tgtatgtcgt ttccgtggta acaatacagt tatggctaaa
    25621 gaaaaaatgg attatatgga tgtatcgccg aaacaagttg tttcagcagc gacagcatgt
    25681 attccattct tagaaaatga tgactcaaac cgtgcattga tgggtgcgaa catgcaacgt
    25741 caagcagtgc ctttgatgaa tccagaagca ccatttgttg gtacaggtat ggaacacgtt
    25801 gcagcacgtg attctggtgc agctattaca gctaagcaca gaggtcgtgt tgaacatgtt
    25861 gaatctaatg aaattcttgt acgtcgtcta gttgaagaga acggcgttga gcatgaaggt
    25921 gaattagatc gctatccatt agctaaattt aaacgttcaa actcaggtac atgttacaac
    25981 caacgtccta tcgttgcagt tggagatgtt gttgagtata acgagatttt agcagatgga
    26041 ccatctatgg aattaggaga aatggcatta ggtagaaacg tagtagttgg tttcatgact
    26101 tgggacggtt ataactatga ggatgccgtt atcatgagtg aaagacttgt gaaagatgac
    26161 gtgtatactt ctattcatat tgaagagtat gaatcagaag cacgtgatac taagttagga
    26221 cctgaagaaa tcacaagaga tattcctaat gtttctgaaa gtgcacttaa gaacttagac
    26281 gatcgtggta tcgtttatat tggtgcagaa gtaaaagatg gagatatttt agttggtaaa
    26341 gtaacgccta aaggtgtaac tgagttaact gccgaagaaa gattgttaca tgcaatcttt
    26401 ggtgaaaaag cacgtgaagt tagagatact tcattacgtg tacctcacgg cgctggcggt
    26461 atcgttcttg atgtaaaagt attcaatcgt gaagaaggcg acgatacatt atcacctggt
    26521 gtaaaccaat tagtacgtgt atatatcgtt caaaaacgta aaattcatgt tggtgataag
    26581 atgtgtggtc gacatggtaa caaaggtgtc atttctaaga ttgttcctga agaagacatg
    26641 ccttacttac cagatggacg tccgattgat atcatgttaa accctcttgg tgtaccatct
    26701 cgtatgaaca tcggacaagt attagagcta cacttaggta tggctgctaa aaatcttggt
    26761 attcacgttg catcaccagt atttgacggt gcaaacgatg acgatgtatg gtcaacaatt
    26821 gaagaagctg gtatggctcg tgatggtaaa actgtacttt atgatggacg tacaggtgaa
    26881 ccattcgata accgtatttc agtaggtgta atgtacatgt tgaaacttgc gcacatggtt
    26941 gatgataaat tacatgcgcg ttcaactgga ccatattcac ttgttacaca acaaccactt
    27001 ggcggtaaag cgcaattcgg tggacaacgt ttcggtgaga tggaggtatg ggcacttgaa
    27061 gcatatggtg ctgcatacac attacaagaa atcttaactt acaaatccga tgatacagta
    27121 ggacgtgtga aaacatacga ggctattgtt aaaggtgaaa acatctctag accaagtgtt
    27181 ccagaatcat tccgagtatt gatgaaagaa ttacaaagtt taggtttaga tgtaaaagtt
    27241 atggatgagc aagataatga aatcgaaatg acagacgttg atgacgatga tgttgtagaa
    27301 cgcaaagtag atttacaaca aaatgatgct cctgaaacac aaaaagaagt tactgattaa
    27361 tacgcaattt acaaaacagg caaaaagata ctaagctgaa ttttattgat gattcagttt
    27421 agtactttaa gccattttaa ataaatgcaa atcaatcaaa tagcacagct aatctaaatt
    27481 gaaggaggta ggctccttga ttgatgtaaa taatttccat tatatgaaaa taggattggc
    27541 ttcacctgaa aaaatccgtt cttggtcttt tggtgaagtt aaaaaacctg aaacaatcaa
    27601 ctaccgtaca ttaaaacctg aaaaagatgg tctattctgt gaaagaattt tcggacctac
    27661 aaaagactgg gaatgtagtt gtggtaaata caaacgtgtt cgctacaaag gcatggtctg
    27721 tgacagatgt ggagttgaag taactaaatc taaagtacgt cgtgaaagaa tgggacacat
    27781 tgaacttgct gctccagttt ctcacatttg gtatttcaaa ggtataccaa gtcgtatggg
    27841 attattactt gacatgtcac caagagcatt agaagaagtt atttactttg cttcttatgt
    27901 tgttgtagat ccaggtccaa ctggtttaga aaagaaaact ttattatctg aagctgaatt
    27961 cagagattat tatgataaat acccaggtca attcgttgca aaaatgggtg cagaaggtat
    28021 taaagattta cttgaagaga ttgatcttga cgaagaactt aaattgttac gcgatgagtt
    28081 ggaatcagct actggtcaaa gacttactcg tgcaattaaa cgtttagaag ttgttgaatc
    28141 attccgtaat tcaggtaaca aaccttcatg gatgatttta gatgtacttc caatcatccc
    28201 accagaaatt cgtccaatgg ttcaattaga tggtggacga tttgcaacaa gtgacttaaa
    28261 cgatttatac cgtcgtgtaa ttaatcgaaa caatcgtttg aaacgtttat tagatttagg
    28321 tgcacctggt atcatcgttc aaaacgaaaa acgtatgtta caagaagccg ttgacgcttt
    28381 aattgataat ggtcgtcgtg gtcgtccagt tactggccca ggtaaccgtc cattaaaatc
    28441 tttatctcat atgttaaaag gtaaacaagg tcgtttccgt caaaacttac ttggtaaacg
    28501 tgttgactat tcaggacgtt cagttatcgc ggtaggtcca agcttgaaaa tgtaccaatg
    28561 tggtttacca aaagaaatgg cacttgaact gtttaaacca ttcgtaatga aagaattagt
    28621 tcaacgtgaa attgcaacta acattaaaaa tgcgaagagt aaaatcgaac gcatggatga
    28681 tgaagtttgg gacgtattgg aagaagtaat tagagaacat cctgtattac ttaaccgtgc
    28741 accaacactt catagacttg gtattcaagc atttgaacca actttagttg aaggtcgtgc
    28801 gattcgtcta catccacttg taacaacagc ttataacgct gactttgatg gtgaccaaat
    28861 ggcggttcac gttcctttat caaaagaggc acaagctgaa gcaagaatgt tgatgttagc
    28921 agcacaaaac atcttgaacc ctaaagatgg taaaccagta gttacaccat cacaagatat
    28981 ggtacttggt aactattacc ttactttaga aagaaaagat gcagtaaata caggcgcaat
    29041 ctttaataat acaaatgaag tattaaaagc atatgcaaat ggctttgtac atttacacac
    29101 aagaattggt gtacatgcaa gttcattcaa caatccaaca tttactgaag aacaaaacaa
    29161 aaagattctt gctacgtcag taggtaaaat tatattcaat gaaatcattc cagattcttt
    29221 tgcttatatt aatgaaccta cgcaagaaaa cttagaaaga aagacaccaa acagatactt
    29281 catcgatcct acaactttag gtgaaggtgg attaaaagaa tactttgaaa atgaagaatt
    29341 aattgaacct ttcaacaaaa aattcttagg taatattatt gcagaagtat tcaacagatt
    29401 tagcatcact gatacatcaa tgatgttaga ccgtatgaaa gacttaggat tcaaattctc
    29461 atctaaagct ggtattacag taggtgttgc tgatatcgta gtattacctg ataagcaaca
    29521 aatacttgat gagcatgaaa aattagtcga cagaattaca aaacaattca atcgtggttt
    29581 aatcactgaa gaagaaagat ataatgcagt tgttgaaatt tggacagatg caaaagatca
    29641 aattcaaggt gaattgatgc aatcacttga taaaactaac ccaatcttca tgatgagtga
    29701 ttcaggtgcc cgtggtaacg catctaactt tacacagtta gcaggtatgc gtggattgat
    29761 ggccgcacca tctggtaaga ttatcgaatt accaatcaca tcttcattcc gtgaaggttt
    29821 aacagtactt gaatacttca tctcaactca cggtgcacgt aaaggtcttg ccgatacagc
    29881 acttaaaaca gctgactcag gatatcttac tcgtcgtctt gttgacgtgg cacaagatgt
    29941 tattgttcgt gaagaagact gtggtactga tagaggttta ttagtttctg atattaaaga
    30001 aggtacagaa atgattgaac catttatcga acgtattgaa ggtcgttatt ctaaagaaac
    30061 aattcgtcat cctgaaactg atgaagttat cattcgtcct gatgaattaa ttacacctga
    30121 aattgctaag aaaattacag atgctggtat tgaacaaatg tatattcgct cagcatttac
    30181 ttgtaacgca cgacatggtg tttgtgaaaa atgttacggt aaaaaccttg ctactggtga
    30241 aaaagttgaa gttggtgaag cagttggtac aattgcagcc caatctatcg gtgaaccagg
    30301 tacacagctt acaatgcgta cattccatac aggtggggta gcaggtagcg atatcacaca
    30361 aggtcttcct cgtattcaag agattttcga agcacgtaac cctaaaggtc aagcggtaat
    30421 tacggaaatc gaaggtgtcg tagaagatat taaattagca aaagatagac aacaagaaat
    30481 tgttgttaaa ggtgctaatg aaacaagatc ataccttgct tcaggtactt caagaattat
    30541 tgtagaaatc ggtcaaccag tacaacgtgg tgaagtatta actgaaggtt ctattgaacc
    30601 taagaattac ttatctgttg ctggattaaa cgcgactgaa agctacttat taaaagaagt
    30661 acaaaaagtt taccgtatgc aaggggtaga aatcgacgat aaacacgttg aggttatggt
    30721 tcgacaaatg ttacgtaaag ttagaattat cgaagcaggt gatacgaagt tattaccagg
    30781 ttcattagtt gatattcata actttacaga tgcaaataga gaagcattta aacaccgtaa
    30841 gcgccctgca acagctaaac cagtattact tggtataact aaagcatcac ttgaaacaga
    30901 aagtttctta tctgcagcat cattccaaga aacaacaaga gttcttacag atgcagcaat
    30961 taaaggtaag cgtgatgact tattaggtct taaagaaaac gtaattattg gtaagttaat
    31021 tccagctggt actggtatga gacgttatag cgacgtaaaa tacgaaaaaa cagctaaacc
    31081 agttgcagaa gttgaatctc aaactgaagt aacggaataa caagtatata acagaggcta
    31141 aggctttagc ctcttgttat ttttatgtaa attatttgat ttaatgttga cgaattctct
    31201 tgttcaatgt taatatatta aaggttgatg caagcagaac tttggaggat aaattattgt
    31261 ctaaggaaaa agttgcacgc tttaacaaac aacattttgt agttggtctt aaagaaacgc
    31321 ttaaagcgtt aaagaaagat caagttacat ctttgattat tgctgaagac gttgaagtat
    31381 atttaatgac tcgcgtgtta agccaaatca atcagaaaaa tatacctgta tcttttttca
    31441 aaagcaaaca tgctttgggt aaacatgtag gtattaacgt caatgcgaca atagtagcat
    31501 tgattaaatg agaattagta agtgttttac ttactaaatt ttatttaacc taaaaatgaa
    31561 ccacctggat gtgtgggatt aaaaagtgaa gagaggagga catatcacat gccaactatt
    31621 aaccaattag tacgtaaacc aagacaaagc aaaatcaaaa aatcagattc tccagcttta
    31681 aataaaggtt tcaacagtaa aaagaaaaaa tttactgact taaactcacc acaaaaacgt
    31741 ggtgtatgta ctcgtgtagg tacaatgaca cctaaaaaac ctaactcagc gttacgtaaa
    31801 tatgcacgtg tgcgtttatc aaacaacatc gaaattaacg catacatccc tggtatcgga
    31861 cataacttac aagaacacag tgttgtactt gtacgtggtg gacgtgtaaa agacttacca
    31921 ggtgtgcgtt accatattgt gcgtggagca cttgatactt caggtgttga cggacgtaga
    31981 caaggtcgtt cattatacgg aactaagaaa cctaaaaact aagaatttag tttttaatta
    32041 aatcttaaac ttaaaatatt taatataagg aagggaggat ttacattatg cctcgtaaag
    32101 gatcagtacc taaaagagac gtattaccag atccaattca taactctaag ttagtaacta
    32161 aattaattaa caaaattatg ttagatggta aacgtggaac agcacaaaga attctttatt
    32221 cagcattcga cctagttgaa caacgcagtg gtcgtgatgc attagaagta ttcgaagaag
    32281 caatcaacaa cattatgcca gtattagaag ttaaagctcg tcgtgtaggt ggttctaact
    32341 atcaagtacc tgtagaagtt cgtccagagc gtcgtactac tttaggttta cgttggttag
    32401 ttaactatgc acgtcttcgt ggtgaaaaaa cgatggaaga tcgtttagct aacgaaattt
    32461 tagatgcagc aaataataca ggtggtgccg ttaagaaacg tgaggacact cacaaaatgg
    32521 ctgaagcaaa caaagcattt gctcactacc gttggtaaga taaaagcttt taccctgagt
    32581 gtgttctata ttaatgaatt ttcattaagc gttcatgctt agggcatcgc catatctatc
    32641 gtatttattc agtaatataa actggaagga gaaaaaatac atggctagag aattttcatt
    32701 agaaaaaact cgtaatatcg gaatcatggc tcacattgat gctggtaaaa cgactacgac
    32761 tgaacgtatt ctttattaca ctggccgtat ccacaaaatt ggtgaaacac acgaaggtgc
    32821 ttcacaaatg gactggatgg agcaagaaca agaccgtggt attactatca catctgctgc
    32881 aacaacagca gcttgggaag gtcaccgtgt aaacattatc gatacacctg gacacgtaga
    32941 cttcactgta gaagttgaac gttcattacg tgtacttgac ggagcagtta cagtacttga
    33001 tgcacaatca ggtgttgaac ctcaaactga aacagtttgg cgtcaggcta caacttatgg
    33061 tgttccacgt atcgtatttg taaacaaaat ggacaaatta ggtgctaact tcgaatactc
    33121 tgtaagtaca ttacatgatc gtttacaagc taacgctgct ccaatccaat taccaattgg
    33181 tgcggaagac gaattcgaag caatcattga cttagttgaa atgaaatgtt tcaaatatac
    33241 aaatgattta ggtactgaaa ttgaagaaat tgaaattcct gaagaccact tagatagagc
    33301 tgaagaagct cgtgctagct taatcgaagc agttgcagaa actagcgacg aattaatgga
    33361 aaaatatctt ggtgacgaag aaatttcagt ttctgaatta aaagaagcta tccgccaagc
    33421 tactactaac gtagaattct acccagtact ttgtggtaca gctttcaaaa acaaaggtgt
    33481 tcaattaatg cttgacgctg taattgatta cttaccttca ccactagacg ttaaaccaat
    33541 tattggtcac cgtgctagca accctgaaga agaagtaatc gcgaaagcag acgattcagc
    33601 tgaattcgct gcattagcgt tcaaagttat gactgaccct tatgttggta aattaacatt
    33661 cttccgtgtg tactcaggta caatgacatc tggttcatac gttaagaact ctactaaagg
    33721 taaacgtgaa cgtgtaggtc gtttattaca aatgcacgct aactcacgtc aagaaatcga
    33781 tactgtatac tctggagata tcgctgctgc ggtaggtctt aaagatacag gtactggtga
    33841 tactttatgt ggtgagaaaa atgacattat cttggaatca atggaattcc cagagccagt
    33901 tattcactta tcagtagagc caaaatctaa agctgaccaa gataaaatga ctcaagcttt
    33961 agttaaatta caagaagaag acccaacatt ccatgcacac actgacgaag aaactggaca
    34021 agttatcatc ggtggtatgg gtgagcttca cttagacatc ttagtagacc gtatgaagaa
    34081 agaattcaac gttgaatgta acgtaggtgc tccaatggtt tcatatcgtg aaacatttaa
    34141 atcatctgca caagttcaag gtaaattctc tcgtcaatct ggtggtcgtg gtcaatacgg
    34201 tgatgttcac attgaattca caccaaacga aacaggcgca ggtttcgaat tcgaaaacgc
    34261 tatcgttggt ggtgtagttc ctcgtgaata cattccatca gtagaagctg gtcttaaaga
    34321 tgctatggaa aatggtgtct tagcaggtta tccattaatt gatgttaaag ctaaattata
    34381 tgatggttca taccatgatg tcgattcatc tgaaatggcc ttcaaaattg ctgcatcatt
    34441 agcacttaaa gaagctgcta aaaaatgtga tcctgtaatc ttagaaccaa tgatgaaagt
    34501 aactattgaa atgcctgaag agtacatggg tgatatcatg ggtgacgtaa catctcgtcg
    34561 tggacgtgtt gatggtatgg aacctcgtgg taatgcacaa gttgttaatg cttatgtacc
    34621 actttcagaa atgttcggtt atgcaacatc attacgttca aacactcaag gtcgcggtac
    34681 ttacactatg tacttcgatc actatgctga agttccaaaa tcaatcgctg aagatattat
    34741 caagaaaaat aaaggtgaat aatataactt gttttgacta gctagcctag gttaaaatac
    34801 aaggtgagct taaatgtaag ctatcatctt tatagtttga ttttttgggg tgaatgcatt
    34861 ataaaagaat tgtaaaattc tttttgcatc gctataaata atttctcatg atggtgagaa
    34921 actatcatga gagataaatt taaatattat ttttaattag aataggagag attt
//
LOCUS       DALMNS010000015        34693 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.015, whole genome shotgun sequence.
ACCESSION   DALMNS010000015 DALMNS010000000
VERSION     DALMNS010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 34693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34693
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.015"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            453..1577
                     /locus_tag="O6Y56_000595"
     CDS             453..1577
                     /locus_tag="O6Y56_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDB5573886.1"
                     /translation="MKIAIIGAGIGGLTAAALLQEQGHTIKVFEKNESVKEIGAGIGI
                     GDNVLKKLGNHDLAKGIKNAGQILSTMTVLDDKDRPLTTVKLKSNTLNVTLPRQTLID
                     IIKSYVKDDAIFTNHEVTHIDNETDKVTIHFAEQESEAFDLCIGADGIHSKVRQSVNA
                     DSKVLYQGYTCFRGLIDDIDLKHPDCAKEYWGRKGRVGIVPLLNNQAYWFITINSKEN
                     NHKYSSFGKPHLQAYFNHYPNEVREILDKQSETGILLHNIYDLKPLKSFVYGRTILLG
                     DAAHATTPNMGQGAGQAMEDAIVLVNCFNAYDFEKALQRYDKIRVKHTAKVIKRSRKI
                     GKIAQYRSRLVVAVRNRIMKMMPNALVAGQTKFLYKSKEK"
     gene            complement(1669..2622)
                     /locus_tag="O6Y56_000596"
     CDS             complement(1669..2622)
                     /locus_tag="O6Y56_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HDB5573887.1"
                     /translation="MEKVYVAGAIPEVGLKLLQEHFEVEMYEGKGLVDKDTLIKGVKN
                     ATALISLLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNA
                     TADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAV
                     ARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLID
                     TEQFKMMKSTAYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLN
                     NVVLTPHIGNATFEARDMMSKIVANAAISAVQGEKPQFVVN"
     gene            complement(2983..3483)
                     /locus_tag="O6Y56_000597"
     CDS             complement(2983..3483)
                     /locus_tag="O6Y56_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDB5573888.1"
                     /translation="MKKLVTATTLTAGIGTALVGQAHHADAAENYTNYNNYNYNTTQT
                     TTTTTTTTTTSSISHSGNLYTAGQCTWYVYDKVGGEIGSTWGNANNWAAAAQGAGFTV
                     NHTPSKGAILQSSEGPFGHVAYVESVNSDGSVTISEMNYSGGPFSVSSRTISASEAGN
                     YNYIHI"
     gene            complement(3720..4142)
                     /locus_tag="O6Y56_000598"
     CDS             complement(3720..4142)
                     /locus_tag="O6Y56_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HDB5573889.1"
                     /translation="MTTEMNDITHHQPNRKSNDENIMAMLIYLLSLFTSIIGPLIIWL
                     LKKDESKLVDRAGKNYLNYTISYIIWSIVLVVITLIGVFLIATDIDFIIIIGFIITFI
                     GILSIFAFSILSFVFTIIACVKYYNGQEYVIPLTIRFI"
     gene            4390..5472
                     /locus_tag="O6Y56_000599"
     CDS             4390..5472
                     /locus_tag="O6Y56_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD/NADP octopine/nopaline dehydrogenase family
                     protein"
                     /protein_id="HDB5573890.1"
                     /translation="MKIAIVGSGNGAVTAAVDMVSKGHDVKLYCRNQSISKFQNAIEK
                     GGFDFNNEGDERFVKFTDISDDMEYVLKDAEIVQVIIPSSYIEYYADVMAEHVTDNQL
                     IFFNMAAAMGSIRFMNVLEDRHIETKPQLAEANTLTYGTRVDFENAAVDLSLNVRRIF
                     FSTYDRSCLNDCYDKVSSIYDHLVKEESLIKTNLENGNPEVHPGPTLLNVGRIDYAGE
                     FALYKEGITKHTVRLLHAIELERLNLGRRLGFELSTAKESRIERGYLERDKEDEPLNR
                     LFNTSPVFSQIPGPNHVESRYLTEDIAYGLVLWSSLGRVIDVPTPNIDAVIVIASTIL
                     ERDFFEEGLTVEEIGLDKLDLEKYLK"
     gene            5567..6967
                     /gene="nhaC"
                     /locus_tag="O6Y56_000600"
     CDS             5567..6967
                     /gene="nhaC"
                     /locus_tag="O6Y56_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HDB5573891.1"
                     /translation="MMTRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYA
                     TWIAKRVGLTWQDLEKGIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDL
                     LNPSYFLISAFFISAVTSVATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAV
                     FGDKMSPLSDTTNLAALVTKVNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSND
                     KQIQTLLSELAQIYQINIWVWVPLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHF
                     KMTDGFKATFSGFNDSMIHQSHISSGVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEK
                     AGCLEVLLTTISKGIHSVGSLICITVICCIALVFAAGVASIVIIMVGVLMKDLFEKYQ
                     VSRSVLSRTLEDSSTMVLPLIPWGTSGIYYTNQLHVSVGEFFIWTVPCYLCAIIAIIY
                     GFTGIGIKKSSNSRLT"
     gene            7141..7338
                     /locus_tag="O6Y56_000601"
     CDS             7141..7338
                     /locus_tag="O6Y56_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573892.1"
                     /translation="MTKLIENLKASIFVSTLTKNLSMYSRFDAPKFGCVNGCMLFILY
                     YRVNRIGENRNFEIFTNPIFS"
     gene            complement(7401..8210)
                     /locus_tag="O6Y56_000602"
     CDS             complement(7401..8210)
                     /locus_tag="O6Y56_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDB5573893.1"
                     /translation="MKKIATATIATAGFATIAIASGNQAHASEQDNYGYNPNDPTSYS
                     YTYTIDAQGNYHYTWKGNWHPSQLNQDNGYYSYYYYNGYNNYNYNNYNNGYSYNNYSR
                     YNNYSNNNQSYNYNNYNSYNTNSYRTGGLGASYSTSSNNVQVTTTMAPSSNGRSISSG
                     YTSGRNLYTSGQCTYYVFDRVGGKIGSTWGNASNWANAAARAGYTVNNTPKAGAIMQT
                     TQGAYGHVAYVESVNSNGSVRVSEMNYGYGPGVVTSRTISASQAAGYNFIH"
     gene            8820..10775
                     /locus_tag="O6Y56_000603"
     CDS             8820..10775
                     /locus_tag="O6Y56_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDB5573894.1"
                     /translation="MTDNYSLHIFKSMKMSSVKEANLKIIYWLQGTGVVSINLQQYDV
                     KRNDVTVIMLNDLYQIDGHDDSVCCVVEVSAKTFLKFMNANYMMRGKILTNEVASTFR
                     ILIKYLIYSKIKQQPYNANDKIINYMCVELMSLNTYDGSRHLVAEEVHDYLTNNHHKK
                     INRKDVINQVSITNKALSDMFKATPYSNFIQYLNHIRLEHCLIDILTSKKPIEEIASS
                     HGFNHYSRFIHLFKETYGDTPKLIRKRYSPTSHSINHSQLVEIDKNILELFDDTNQSS
                     SSMREIDIPFEPTKRSQMYQPKNIYIKGSNFYWMDYYTIKQIIQRLGVNPENLHIIVT
                     IDTSNELSIEQITLLLQKIVNYNVNVVFRIKHEYKELLTSTERGKIEKLVATIFNMTF
                     ESNRCKIAFLINDLNTTAIQKLKRLIDNYIGVFELIYHLEPNELNTRYDKEIDHLIDY
                     FILPLRQIEQVSIARSKIICDVDLINENNDLKEKITISDINKVTELLTNYTKFQGLIM
                     HMSIINEASKEINSTRLSIFIFIINILNQLRGIVIYQNDTMIVTKFKHEVQCVICLPA
                     ALLNENSDAIRLSCKGLQQFSHAKTKQIVLSIDKDNHTSENGVLVNDIMQQHSYWKAN
                     FIERNIYDHSLMVSSNSIVHLKYHLEI"
     gene            10801..11544
                     /locus_tag="O6Y56_000604"
     CDS             10801..11544
                     /locus_tag="O6Y56_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SarA family transcriptional regulator"
                     /protein_id="HDB5573895.1"
                     /translation="MSKFKVKRLTAHILMLKVINDMLKYSFHLTLTQVKLLNLLVKYD
                     NSDSNSASIDRLLKMKEIQSKMALLQMLSYLNNHQWLLKGRDQRDQRKLTISIKKMHI
                     DKIEYMNNELSDYIERYFGQYTFDFSCDYVSYLLSSQELLRNLKRYLNMCQLLLEELY
                     VLGILNLHKGQLTVKELQGEFHHPIFAVSPILKCLISKGLVKKERCELDERRVIVTIK
                     REKFSKVTMLIQACYNYLEKGIQVKLNNK"
     gene            11608..11934
                     /locus_tag="O6Y56_000605"
     CDS             11608..11934
                     /locus_tag="O6Y56_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HDB5573896.1"
                     /translation="MILDNVNPNDLFPTEKKGPSVLGIIEYQVQGENEFEGAFIATNE
                     RLIMNVDMNGQFYYRSISYNEIEKIDYDGQTIMFKFNIGNVPMHDIKSDNVEMFVEYV
                     KQHMIV"
     gene            12362..12709
                     /gene="sarR"
                     /locus_tag="O6Y56_000606"
     CDS             12362..12709
                     /gene="sarR"
                     /locus_tag="O6Y56_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarR"
                     /protein_id="HDB5573897.1"
                     /translation="MSKINDINDLVNATFQVKKFFRDTKKKFNLNYEEIYILNHILRS
                     ESNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDTQKANI
                     QKLISELEEYIKN"
     gene            complement(12898..13734)
                     /locus_tag="O6Y56_000607"
     CDS             complement(12898..13734)
                     /locus_tag="O6Y56_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HDB5573898.1"
                     /translation="MDEQQWTGQLDLTVFFDGNRSVSRDIFFEKALKVIRPVYLNQST
                     IPTFYIVNVGGGYLDGDRYRMNVNVEDNAKVTLTSQGATKIYKTPSNHVEQYQTFNLK
                     DNAYLEYVADPIIAYENAKFYQHNTFNLNNSSSLFYTDILTPGYSKTGEAFKYQYMHL
                     INEIYIEDELVTYDNLLLNPNKQSINEIGYMEHYSHYGSAYFIHEDVNQKLIDSVYET
                     ISSYSNTFDCRVAISQLPTHGFAVRIFAYRTQIIEKILETIQSYIAENIYDRKLDFLR
                     KY"
     gene            complement(13734..14348)
                     /gene="ureG"
                     /locus_tag="O6Y56_000608"
     CDS             complement(13734..14348)
                     /gene="ureG"
                     /locus_tag="O6Y56_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreG"
                     /protein_id="HDB5573899.1"
                     /translation="MANPIKIGIGGPVGAGKTQLIEKVVKRLSKEMSIGVITNDIYTK
                     EDEKILVNSGVLPESRIIGVETGGCPHTAIREDASMNFAAIDELLERHDDIELIFIES
                     GGDNLAATFSPELVDFSIYIIDVAQGEKIPRKGGQGMIKSDFFVINKTDLAPYVGASL
                     EQMAEDTKVFRGKRPFTFTNLKTDEGLDEVIDWIERDTLLKGLS"
     gene            complement(14361..15050)
                     /locus_tag="O6Y56_000609"
     CDS             complement(14361..15050)
                     /locus_tag="O6Y56_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreF"
                     /protein_id="HDB5573900.1"
                     /translation="MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFI
                     AWLKMFLQEQLTYSDGLAMRLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMG
                     TRMVKLALELYNSPWIAWYHQQMQDKKAKLNPAICFTMLGHYLGVDIETIIDYYLYQN
                     VSSLTQNAVRAIPLGQTAGQKIVTHMIPYIEETRKQIFELKEADFGMTAPGLELNQMA
                     HENVNVRIFIS"
     gene            complement(15043..15495)
                     /gene="ureE"
                     /locus_tag="O6Y56_000610"
     CDS             complement(15043..15495)
                     /gene="ureE"
                     /locus_tag="O6Y56_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreE"
                     /protein_id="HDB5573901.1"
                     /translation="MIVEEIQGNIANLSNSEKQKHVEKVYLENSDLVKRIQRVVTDHG
                     TEIGIRLKQPIDLQYGDILYADDHNMIIVDVNSEDLLVIQPRTLQEMGDIAHQLGNRH
                     LPAQFTETEMLVQYDYLVEDLLKSLGIPYVREDRKVNKAFRHIGHSHD"
     gene            complement(15508..17223)
                     /gene="ureC"
                     /locus_tag="O6Y56_000611"
     CDS             complement(15508..17223)
                     /gene="ureC"
                     /locus_tag="O6Y56_000611"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002447295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit alpha"
                     /protein_id="HDB5573902.1"
                     /translation="MSFKMTQNQYTSLYGPTVGDSIRLGDTNLFAQIEKDYAVYGEEA
                     TFGGGKSIRDGMAQNPRVTRDDVNVADLVISNAVIIDYDKVVKADIGIKNGYIFAIGN
                     AGNPDIMDNVDIIIGSTTDIIAAEGKIVTAGGIDTHVHFINPEQAEVALESGITTHIG
                     GGTGASEGSKATTVTPGPWHIHRMLEAAEGLPINVGFTGKGQATNPTALIEQINAGAI
                     GLKVHEDWGATPSALSHALDVADEFDVQIALHADTLNEAGFMEDTMAAVKDRVLHMYH
                     TEGAGGGHAPDLIKSAAFSNILPSSTNPTLPYTHNTVDEHLDMVMITHHLNAAIPEDI
                     AFADSRIRKETIAAEDVLQDMGVFSMISSDSQAMGRVGEVITRTWQVAHRMKEQRGPL
                     DGDFEHNDNNRIKRYIAKYTINPAITHGISEYVGSIEPGKLADIVLWDPIFFGVKPEL
                     VVKGGLINSAVNGDANGSIPTSEPMKYRKMYGQYGGNLTSTSMTFVSKTAYENGINRA
                     LNLKRMVRPVKNIRQLSKADMKNNSATPKLDVDPQTYEVYVDGEKITSNAATELPLTQ
                     RYFLF"
     gene            complement(17220..17630)
                     /locus_tag="O6Y56_000612"
     CDS             complement(17220..17630)
                     /locus_tag="O6Y56_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit beta"
                     /protein_id="HDB5573903.1"
                     /translation="MIPGEIITKSTEVEINNHHPETVIEVENTGDRPIQVGSHFHFYE
                     ANAALDFEREMAYGKHLDIPAGAAVRFEPGDKKEVQLVEYAGKRKIFGFRGMVNGPID
                     ESRVYRPTDENDEYAGVFGDNGDENVNKKGGKRS"
     gene            complement(17644..17946)
                     /locus_tag="O6Y56_000613"
     CDS             complement(17644..17946)
                     /locus_tag="O6Y56_000613"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001832402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit gamma"
                     /protein_id="HDB5573904.1"
                     /translation="MHFTQREQDKLMIVVAAEVARRRKARGLKLNHPEALALISDELL
                     EGARDGKTVAELMSYGRQILNKEDVMDGVEHMITDIEIEATFPDGTKLITVHHPIV"
     gene            18206..19111
                     /gene="yut"
                     /locus_tag="O6Y56_000614"
     CDS             18206..19111
                     /gene="yut"
                     /locus_tag="O6Y56_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016266007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea transporter"
                     /protein_id="HDB5573905.1"
                     /translation="MKMIDVLLKNISQVVLISNKWTGLFILIGLFVANWTVGLAAMLG
                     SIIAYAFARYINYSEAEINDGLAGFNPVLTAIALTIFLDKSGLDIVITMIATLLTLPV
                     AAAVREVLRPYKVPMLTMPFVIVTWFTILLSGQVKFVDTSLKLMPQNIETVNFSNNDR
                     IHFIQSLFEGFSQVFIEASVIGGVCILIGILIASRKAALLAVIASLLSFIIVALLGGN
                     YDDINQGLFGYNFVLMAIALGYTFKTAINPYISTFLGVLLTVVVQLGTTTLLEPFGLP
                     ALTLPFIIVTWILLFAGIKHDKVDA"
     gene            19328..20482
                     /locus_tag="O6Y56_000615"
     CDS             19328..20482
                     /locus_tag="O6Y56_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HDB5573906.1"
                     /translation="MNDMDNSFLITTEIQRKWIEKFKAIGDTFKAKSEYNDQHSQFPY
                     KNIEWLIKEGYGKLTLPKAYGGEGATIEDMVILQSFLGELDGATALSIGWHVSVVGQI
                     YEQKLWSQDMLEQFAVEINNGALVNRAVSEAEMGSPTRGGRPSTHAVKADDGYILNGV
                     KTYTSMSKALTHIIVAAYIEELESVGFFLVDRNLPGVEIADNWDVLGMRATESHDLIL
                     NDVKVPLKHLVETEKSKAPNGWILHIPSCYLGIAQAARNYAVDFAIQHSPNSIEGTIA
                     TLPTVQQNLGKMETLLLCARQFLWSTAIGYQQYKDDSQIRNSTSASKVMVMNQGLEVI
                     DLAMRIVGAKSLEMNRPLQRYYRDMRAGLHNPPMEDAAYTNIAKSITNTF"
     gene            20697..21605
                     /locus_tag="O6Y56_000616"
     CDS             20697..21605
                     /locus_tag="O6Y56_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDB5573907.1"
                     /translation="MKKLLLPLIIMLLVLAACGNQGEKNNKAETKSYKMDDGKTVDIP
                     KDPKRIAVVAPTYAGGLKKLGANIVAVNQQVDQSKVLKDKFKGVTKIGDGDVEKVAKE
                     KPDLIIVYSTDKDIKKYQKVAPTVVVDYNKHKYLEQQEMLGKIVGKEDKVKAWKKDWE
                     ETTAKDGKEIKKAIGQDATVSLFDEFDKKLYTYGDNWGRGGEVLYQAFGLKMQPEQQK
                     LTAKAGWAEVKQEEIEKYAGDYIVSTSEGKPTPGYESTNMWKNLKATKEGPIVKVDAG
                     TYWYNDPYTLDFMRKDLKEKLIKAAK"
     gene            22006..22947
                     /locus_tag="O6Y56_000617"
     CDS             22006..22947
                     /locus_tag="O6Y56_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HDB5573908.1"
                     /translation="MTKKVYFNHDGGVDDLVSLFLLLQMENVHLIGVSTIGADCYLEP
                     SLSASIKIINRFSNEDIQVAPSYERGKNPFPKEWRMHAFFMDALPILNEPVKHVASNA
                     SDKEAFEDIIQTLKRQSEKVTLLFTGPLTDLAKALQKDSSIVQYIEKIVWMGGTFLPK
                     GNVEEPEHDGSAEWNAYWDPEAVKIVFDSDIEIDMVALESTNQVPLTLDVRQRWANER
                     QYTGIDFLGVSYAAVPPLTHFITNSTYFLWDVLTTAYIGNKDLVHSIEKKVDVISYGP
                     SQGKTFECKDGRKINVINHVDNNAFFNYITALAKKVN"
     gene            23068..23622
                     /locus_tag="O6Y56_000618"
     CDS             23068..23622
                     /locus_tag="O6Y56_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HDB5573909.1"
                     /translation="MTTKQLVYTALMTAIIAILGLVPVIPLPFSSVPIVLQNIGIFLA
                     GVILGRKYGTLSVIVFLLLVVAGLPLLSGGRGGIGVFAGPSAGFLLLYPVVAFMIGAI
                     RDRFINEINFWILFVGILVFGVIALDVIGTLIMGMIINIPFTKAISISLAYLPGDILK
                     AIVASLIGTALLNHSQFRQIMGLK"
     gene            23694..24464
                     /locus_tag="O6Y56_000619"
     CDS             23694..24464
                     /locus_tag="O6Y56_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5573910.1"
                     /translation="MASISMSDIYCNGTIFENDDEQLIYLTPSFPQRYTSNTWIYKKT
                     PTEERWLKDLERQHQLHTNQGSNHYAFSFPENEQLDNHWMAMFKDMNFELGIMELYAI
                     ESDALANLPRNSDVEIAIVDESHIDAYLKVAYQFSLPFGKDYADAHEKMVREHYQKDV
                     IKRLVAYLNNEPIGVVDVIESENYIELDGFGVLEQFRHQGIGSTIQSLIGEYAISKNH
                     KPIILVADGEDTAKDMYAKQGYVYQSFCYQILKEDIGN"
     gene            complement(24636..25433)
                     /gene="fdhD"
                     /locus_tag="O6Y56_000620"
     CDS             complement(24636..25433)
                     /gene="fdhD"
                     /locus_tag="O6Y56_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDB5573911.1"
                     /translation="MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATV
                     ICSPTNLEELVIGFLASEGAILKRDELKSVLIDDSKGFAHVELNKDLGDRFQYSTKRM
                     IASCCGKSREFYFQNDAAIAKTSMSKITLTPIQIINMMTRLQSASHIYQETGGLHNAA
                     ISDGLTFFVHRQDIGRHNALDKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGV
                     GVILSKSAPTTLAVTLANDLNITAIGFIRNGGFNIYSHPERIIDSEQ"
     gene            25723..26505
                     /gene="modA"
                     /locus_tag="O6Y56_000621"
     CDS             25723..26505
                     /gene="modA"
                     /locus_tag="O6Y56_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDB5573912.1"
                     /translation="MKMKRLFAVVIAMLLVLAGCSNSNDNNESKKDDAANGKKQEIQV
                     AAAASLTDVTKKLATEFKKEHKNADIKFNYGGSGALRKQIESGAPVDVFMSANTKDVD
                     ALKDKNKAHDTYKYAKNSLVLIGDKDSNYTSVKDLKDNDKIALGEVKTVPAGKYAKQY
                     LDNNNLFKEVESKIVYAKDVKQVLNYVEKGNAKQGFVYKTDLYKQNKKIDTVKVIKEV
                     ELKKPITYEAGATSDSKLAKEWMEFLKSDKAKEILKEYHFAA"
     gene            26519..27190
                     /gene="modB"
                     /locus_tag="O6Y56_000622"
     CDS             26519..27190
                     /gene="modB"
                     /locus_tag="O6Y56_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDB5573913.1"
                     /translation="MPDLTPFWISIRVAVISTIIVTVLGIFISKWLYRRKGSWVKVLE
                     SLLILPIVLPPTVLGFILLIIFSPRGPIGQFFANVLHLPVVFTLTGAVIASVIVSFPL
                     MYQHTVQGFRGIDTKMINTARTMGASETKIFLKLILPLAKRSILAGIMMSFARALGEF
                     GATLMVAGYIPNKTNTLPLEIYFLVEQGRENEAWLWVLVLVAFSIVVISTINLLNKDK
                     YKEVD"
     gene            27191..27796
                     /locus_tag="O6Y56_000623"
     CDS             27191..27796
                     /locus_tag="O6Y56_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDB5573914.1"
                     /translation="MLKINLKYQLKNTLIRINIDDTEPKIYAVRGPSGIGKTTVLNMI
                     AGLRKADEAIIEVNGQLLTDTAKNVNVKIQQRRIGYLFQDYQLFPNMTVYKNITFMAE
                     PSEHIDQLIQTLNIDHLMKQYPMTLSGGEAQRVALARALSTKPDLILLDEPFSSLDDT
                     TKDESITLVKRIFNEWQIPIIFVTHSNYEAEQMAHEIITIG"
     gene            27965..28969
                     /locus_tag="O6Y56_000624"
     CDS             27965..28969
                     /locus_tag="O6Y56_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HDB5573915.1"
                     /translation="MSQERYSRQILFKQIGEIGQSKINQKCALIIGMGALGTHVAEGL
                     VRAGIAKLIIVDRDYIEFSNLQRQTLFTEEDALKMMPKVVAAKKHLLALRSDVDIDDY
                     IAHVDYYFLETHGQDVDVIIDATDNFETRQLINDFAYKHRIPWIYGGVVQSTYTEAAF
                     IPGKTPCFNCLVPQLPALNLTCDTVGVIQPAVTMATSLQLRDAMKVLTEQPIDTKITY
                     GDIWEGSHYSFGFSKMQRSACTTCGDIPSYPYLNKNEQRYATLCGRDTVQYENASITH
                     DILVQFLKQHQLNYRSNSYMVMFEFKGHRIVAFKGGRFLIHGMTRTSDATHLMNLLFG
                     "
     gene            29000..29506
                     /locus_tag="O6Y56_000625"
     CDS             29000..29506
                     /locus_tag="O6Y56_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaB"
                     /protein_id="HDB5573916.1"
                     /translation="MGEHQNVKLNRTVKAAVLTVSDTRDFDTDKGGQCVRQLLQADDV
                     EVSDAHYTIVKDEKVAITTQVKKWLEEDIDVIITTGGTGIAQRDVTIEAVKPLLTKEI
                     EGFGELFRYLSYVEDVGTRALLSRAVAGTVNNKLIFSIPGSTGAVKLALEKLIKPELN
                     HLIHELTK"
     gene            complement(29508..30002)
                     /gene="moaC"
                     /locus_tag="O6Y56_000626"
     CDS             complement(29508..30002)
                     /gene="moaC"
                     /locus_tag="O6Y56_000626"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDB5573917.1"
                     /translation="MTEFTHINQQGHAKMVDVSDKQITKRTAVAHSSITVNETIYKQI
                     SNNTNTKGNVLNTAQIAGIMAAKNTSTIIPMCHPLPLTGIDVHFSWDETNAPLYTLNI
                     QTTVSTTGKTGVEMEALTAASATALTIYDMTKAVDKGMIIGETYLESKSGGKSGDFQR
                     QSGQ"
     gene            30065..31324
                     /locus_tag="O6Y56_000627"
     CDS             30065..31324
                     /locus_tag="O6Y56_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDB5573918.1"
                     /translation="MVVEKRNPIPVKEAIQRIVNQQSSMPAITVALEKSLNHILAEDI
                     VATYDIPRFDKSPYDGFAIRSVDSQGASGQNRIEFKVIDHIGAGSVSDKLVGDHEAVR
                     IMTGAQIPNGADAVVMFEQTIELEDTFTIRKPFSKNENISLKGEETKTGDVVLKKGQV
                     INPGAIAVLATYGYAEVKVIKQPSVAVIATGSELLDVNDVLEDGKIRNSNGPMIRALA
                     EKLGLEVGIYKTQQDDLDSGIQVVKEAMEKHDIVITTGGVSVGDFDYLPEIYKTVKAK
                     VLFNKVAMRPGSVTTVAFADGKYLFGLSGNPSACFTGFELFVKPAVKHMCGALEVFPQ
                     IIKATLMEDFTKANPFTRFIRAKATLTSAGATVVPSGFNKSGAVVAIAHANCMVMLPG
                     GSRGFKAGHTVDIILTESDAAEEELLL"
     gene            31321..31806
                     /gene="mobB"
                     /locus_tag="O6Y56_000628"
     CDS             31321..31806
                     /gene="mobB"
                     /locus_tag="O6Y56_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HDB5573919.1"
                     /translation="MILQIVGYKKSGKTTLMRHIVSFLKSHGYTVATIKHHGHGKEDI
                     QLQDSDVDHMKHFEAGADQSIVQGFQYQQTVTRVDNQNLTQIIEKSVTIDTNIVLVEG
                     FKNADFEKVVVYRDEEELQVLQQLSNVCYSINVREHEDFTAFEQWLLNKIKNDCDTQL
                     T"
     gene            31820..32266
                     /locus_tag="O6Y56_000629"
     CDS             31820..32266
                     /locus_tag="O6Y56_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HDB5573920.1"
                     /translation="MKQFEIVTEPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKT
                     EYLEYEAYIPMAEKKLAQIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRK
                     DAYRANEYAIERIKEIVPIWKKEIWEDGSKWQGHQKGNYEEAKREE"
     gene            32272..32505
                     /gene="moaD"
                     /locus_tag="O6Y56_000630"
     CDS             32272..32505
                     /gene="moaD"
                     /locus_tag="O6Y56_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HDB5573921.1"
                     /translation="MKVLYFAEIKDILQKAQEDIVLEQGLTVQQFEDLLFERYPQINN
                     KKFQVAVNEEFVQKSDFIQPNDTVALIPPVSGG"
     gene            32512..33111
                     /gene="mobA"
                     /locus_tag="O6Y56_000631"
     CDS             32512..33111
                     /gene="mobA"
                     /locus_tag="O6Y56_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HDB5573922.1"
                     /translation="MKAIILAGGHSVRFGKPKAFAEVNGETFYSRVIKTLESTNMFNE
                     IIISTNAQLATQFKYPNVVIDDENHNDKGPLAGIYTIMKQHPEEELFFVVSVDTPMIT
                     GKAVSTLYQFLVSHLIENHLDVAAFKEDGRFIPTIAFYSPNALGAITKALHSDNYSFK
                     NVYHELSTDYLDVRDVDAPSYWYKNINYQHDLDALIQKL"
     gene            33131..34153
                     /gene="moaA"
                     /locus_tag="O6Y56_000632"
     CDS             33131..34153
                     /gene="moaA"
                     /locus_tag="O6Y56_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDB5573923.1"
                     /translation="MVEQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFL
                     PKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLNVLIAKLNQIDGIEDIGLT
                     TNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGL
                     NVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLT
                     MIEEHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFY
                     GCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQRKKIN
                     MNYIGG"
     gene            complement(34494..34664)
                     /locus_tag="O6Y56_000633"
     CDS             complement(34494..34664)
                     /locus_tag="O6Y56_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573924.1"
                     /translation="MFRFISFGQLVVYSTTFIPKKDILQLNDMECDINVKEPLKIYYV
                     VILKSGIEMIFS"
BASE COUNT        11985 a         5007 c         6324 g        11377 t
ORIGIN      
        1 aacttgcaca ttattgtaag ctgactttcc gccagcttct gtgttggggc cccgccaact
       61 tgcattgtct gtagaatttc ttttcgaaat tctctgtgtt ggggcccaca ccccaactcg
      121 cattgcctgt agaatttctt ttcgaaattc tctgtgttgg ggccctgact agagttgaaa
      181 aaagcttgtt gcaagcgcat tttcattcag tcaactacta ccaatataat attatagacc
      241 ctaggacatt gatttatgtc ccaagctccc acatcattgt tgcaaatgta cattatgtaa
      301 atgaatattg ctgtctaaat gtgcatgtaa tatacaatgg tgcagataat acacttaagt
      361 ctttaaaaat gaaacgttag ttccaagagt catttttaaa caatagtgca tgtgataaaa
      421 tagaaaagaa tgaaaaatat agaggtgaca atatgaagat agcaattata ggtgcaggca
      481 tcggtggatt aacagctgct gcattattac aagaacaagg tcatactatt aaagtctttg
      541 aaaaaaatga gtcagttaaa gaaattggcg ctgggattgg tatcggagat aatgtgctta
      601 aaaaactagg taatcatgac ttagctaaag gtattaaaaa tgctgggcaa atcttatcta
      661 caatgacagt gttagatgac aaagatcgtc cgttaactac tgttaaatta aaaagtaata
      721 cattgaatgt gacgttacca cgccaaacat taattgacat tattaaatct tatgtaaaag
      781 atgatgcaat atttacaaat catgaagtca cgcatataga taatgagaca gataaagtta
      841 ccatacattt cgcggaacaa gaaagtgaag catttgattt atgtattggt gctgatggaa
      901 ttcattctaa agtgagacaa tctgtaaatg ctgacagtaa agtattatat caagggtata
      961 catgctttag aggtttaatt gatgatattg atttaaagca tccggattgt gcaaaagaat
     1021 actggggaag aaaaggaaga gtaggtattg ttccgttatt aaataatcaa gcatattggt
     1081 tcattacaat taactcgaag gaaaacaatc ataaatatag ttcgtttggt aaacctcatt
     1141 tgcaagcata ctttaatcac tatccaaatg aagttagaga gatcttagac aaacaaagtg
     1201 aaacaggtat cttattgcat aatatttatg atttgaaacc actcaaatct tttgtttatg
     1261 gtcgtactat tttactagga gatgcagcac atgcgacaac gcctaatatg gggcaaggtg
     1321 ctggacaagc aatggaagat gctatcgtat tagtaaattg ttttaacgca tacgactttg
     1381 aaaaagcatt acagcgttat gataaaatac gtgtcaaaca tactgcaaaa gtaattaagc
     1441 gttctagaaa aatcggtaaa attgcccaat atcgtagtcg tttagttgtt gcagttagaa
     1501 atcgtattat gaaaatgatg ccaaatgcat tagtagctgg acagactaaa ttcttatata
     1561 aatcgaaaga aaagtaatac aacaatatga aaacccccgt atgttgaaaa gagagctcaa
     1621 catacggggg ttcttgtttt tataatgtca ttataataaa ttcaattatt agttaacgac
     1681 aaattgtggt ttctcacctt gaacggcact aattgcagca ttagcaacaa ttttagacat
     1741 catgtcacgt gcttcaaatg tagcattacc aatatgcggt gttaatacta cattattaag
     1801 tgattttaag tcatcggtaa tatctggttc aaattcatat acatcaagtg cagcaccttc
     1861 aatttcatta tctttcaatg cttgcactag tgcttgttcg tgcacgatag gaccacgaga
     1921 ggcattgatt aaatacgccg tagatttcat cattttaaat tgttctgtat caattaaatg
     1981 atgcatttta ggattataag cagcgttgat agtgataaaa tctgcattct ttaatagtgt
     2041 atctaaatct acatattttg caccgatttc tcgttctttt tcttctttgc gattaggtcc
     2101 tgtgtatagt acatccatgt caaatgctct tgcacgacga gctactgcac taccaatttc
     2161 acctaaaccg ataatgccga ttgttttccc agatacttct ctacctctga aaaataaagg
     2221 tgcccatccg tcaaatccag ttgtacgtga taattggtcg ccttcaacaa tacgacgcgc
     2281 tactgcaagt actaatccaa ttgttaaatc agcagtcgcg tttgttgatg ctttaggtgt
     2341 gtttgtaaca tctatacttt tttctcgggc atactcgata tcaatattat taaaaccagc
     2401 gccatagttt gcaatgattt ttaagtcttt accagcatcg ataacatctt tatcaacatt
     2461 tgtagataat aaactaatta aggcagtcgc gtttttaaca cctttaatta aagtgtcttt
     2521 atcgactaat cctttacctt catacatttc aacttcaaaa tgttcttgta aaagttttaa
     2581 acctacttct ggtattgcac cagcaacata aactttttcc ataaaagctc actcctttta
     2641 tcttagtata gtagaagatt agacagtata caactatgtc atgatgtctt gtgtatcaat
     2701 gatgtaagcg tgtacttttg atggaggtga tataacttgg cactgtagaa ctattaatat
     2761 tgtaatgtgg aaaaactgga tcaattaaat tagataacgt agttttaaag ttaatagtat
     2821 tgaaaaaaat taatattatg aatatgggag aaaatatata taagtaggtg gcaacgaaaa
     2881 atagcaaaaa aagagcttct cctataaagg aaagctcaaa gttttttgat gacatatgta
     2941 ctagaattaa gtttcaagac aatatgtatc atcgtgttta tattaaatat ggatgtagtt
     3001 gtagttacct gcttcacttg cagaaatagt tctagaactt actgagaaag gtccgccact
     3061 ataattcatt tctgaaattg taactgaacc atcactgttt acactttcta catatgcaac
     3121 gtgaccaaat ggtccttcag aagattgtag gatagcgcct ttagaaggtg tatggtttac
     3181 tgtgaatcca gcaccttgtg cagcagcagc ccaattatta gcatttcccc aagtagaacc
     3241 gatttctccg cctactttat catatacata ccaagtacat tgtcctgcag tgtataagtt
     3301 accagaatgt gaaattgatg atgtagttgt cgtagttgtt gtagtcgttg tagtttgagt
     3361 cgtgttgtag ttatagttgt tgtaatttgt ataattttca gcagcatctg catgatgtgc
     3421 ttgacctact aatgctgtac cgattcctgc tgttaacgta gttgctgtta ctaatttttt
     3481 catgaataaa gtcctccaaa gttctatatc tttttttata aataaaacgt agcgactgtt
     3541 ttattctcac atctcgaatt gatgacaata gttactttaa caaaattaat gcttcttgtg
     3601 gggaatgtta ttgatttgta aaagaataaa aaaactttga ctaattttgt aataaaaatt
     3661 agtcaaagtt acaatgagat taacagataa ttaataggaa atatttattt gtaatatgtt
     3721 taaataaatc gaattgttaa aggtattaca tattcttgac cattataata tttgacacac
     3781 gcaataattg tgaatacaaa agataatatt gagaaagcga atatggataa aataccgata
     3841 aatgtaatga tgaaacctat aatgataatg aaatcaatat cggtagcaat taggaaaacg
     3901 cctattaaag tgataacgac taaaacgata gaccaaataa tatatgaaat cgtatagtta
     3961 agataatttt ttccagcacg atcaactagt ttcgattcat cttttttcaa taaccatata
     4021 atcagtggcc caataataga tgtgaataaa cttaataaat agataagcat cgccataatg
     4081 ttctcatcat tggatttgcg attcggttga tgatgtgtta tgtcgttcat ttcagttgtc
     4141 atattagaca ctcctttgaa aattgtaata ttatctttaa ctataacaaa atataatcaa
     4201 aaataaacat gtttattaaa caattattaa aaataaaaat aattggtgga cgtcggcgtt
     4261 taaataggtt aatttaaggt tatatatact taacatttat aatgatgcgt aatgaattcg
     4321 catcattttt atattgtctt acgtataatt tgtttttaat tttaaccaaa gatagaaaga
     4381 gggttgttta tgaaaatagc aattgtagga tcaggaaatg gcgcagttac ggcagcagta
     4441 gatatggtga gcaaaggcca cgatgttaaa ttatattgtc gtaatcaatc tataagtaag
     4501 tttcaaaatg caatcgaaaa gggcggattt gattttaata atgaaggtga tgaacgtttc
     4561 gtaaaattca ctgatattag tgatgatatg gaatatgttt taaaagatgc tgaaattgtt
     4621 caagtgatta ttccatcttc atacatagag tattatgctg atgtaatggc agagcatgta
     4681 actgataatc agttgatatt cttcaacatg gctgcagcaa tggggtcaat tcgttttatg
     4741 aatgttttag aagatagaca tattgaaaca aaaccacaat tagcggaagc taatacgttg
     4801 acgtatggta cgcgtgtcga ttttgaaaat gcagcagttg atttatctct aaatgtacgt
     4861 cgtatcttct tttcaacata tgatagaagc tgtctaaatg attgttatga caaagtttca
     4921 agtatttatg atcatttagt aaaagaggaa agcttaatta aaacaaatct tgaaaatggt
     4981 aatcctgaag tgcatccagg gccaacatta ttgaatgtcg gtcgcattga ttatgctggt
     5041 gagttcgctt tatataaaga aggaattact aaacatacag ttagattact tcatgcaatc
     5101 gaattagaac gtttaaattt aggccgtaga ttaggttttg aattatcaac agctaaagaa
     5161 tcacgtattg aacgtggtta tttagaacgt gataaagaag atgaaccatt aaatcgtttg
     5221 tttaatacaa gcccggtatt ttcacaaatt ccaggaccaa atcatgtaga aagcagatat
     5281 ttaactgagg atattgcata tggtttagta ttatggtcaa gcttaggtcg tgttattgat
     5341 gtaccgacac caaatataga tgcagtaatt gtaattgcat caactatttt agagagagac
     5401 ttctttgagg aaggcttaac agttgaagaa attggtttag ataagcttga tttagaaaaa
     5461 tatttaaaat aaatgatggc ttgaagatag aaaaggatat agtattatgc aaaagcaata
     5521 aattgaagaa aagaggtttc tcatcaataa gcgaagggga cgatagatga tgacaagaaa
     5581 accaaccttt ttagaatcaa tttcgacaat gattgtaatg gttattgttg ttgtaacagg
     5641 ctttgtgttt tttgatattc caattcaagt attattaatt attgcctcag catatgccac
     5701 atggattgca aaacgtgtag gcttaacatg gcaagattta gaaaaaggca ttgcagaacg
     5761 tttaaatact gcaatgcctg caattttaat tatactagcg gtaggaatta tagtaggcag
     5821 ttggatgttt tctggcacag tgccagcctt gatttattat ggcttagatt tattgaatcc
     5881 aagctatttt ttaatatcag ccttttttat aagtgctgtt acatctgtag caactggtac
     5941 agcatggggc tctgcatcaa ctgcagggat tgcacttatt tctattggta atcaattggg
     6001 gattcctcca gggatggcag caggtgctat tatagcaggg gctgtgtttg gcgataaaat
     6061 gtcaccatta tcagatacaa ctaatttagc ggcgcttgtt actaaagtta atatatttaa
     6121 acatatacat tcgatgatgt ggacgacgat accagcgtca atcataggtt tattagtatg
     6181 gtttattgct ggatttcaat ttaaagggca ttcaaatgat aaacagatcc aaactttgtt
     6241 atcagagctt gcacagattt atcaaattaa catatgggtc tgggttccct taattgtgat
     6301 cattgtttgt ttgctattta aaatggctac agtgccagct atgctaatat caagcttttc
     6361 tgccattata gtggggactt ttaatcatca tttcaaaatg acagatggtt tcaaagcaac
     6421 atttagtggt tttaacgact caatgataca tcagtctcat atttcatccg gtgtgaaaag
     6481 cttgttagaa cagggtggta tgatgagtat gacccaaata ttagtaacga tattttgcgg
     6541 atatgcattt gcaggtattg tagaaaaagc aggatgttta gaagtcttat taactactat
     6601 ttctaaaggc atccattctg taggaagttt aatatgtatt actgttattt gttgtattgc
     6661 gcttgtattc gctgcaggtg ttgcttcgat tgtaattatt atggtcggtg tgttaatgaa
     6721 agatttgttc gaaaaatacc aagtctctcg ttccgtttta tcaagaacac ttgaagactc
     6781 aagtacgatg gtcttacctt taataccatg gggaacatca ggtatttact atacgaatca
     6841 acttcatgtc tctgttggag aatttttcat atggacagta ccatgttatt tatgcgcaat
     6901 tatagcaatt atctatggtt ttacagggat aggtattaaa aagtcatcga attcacgttt
     6961 aacttaatgt gagcgtggaa tatatataat atgttgaaac actttaatca tttataattg
     7021 tagcggttat aatttgaaaa ggttttaact tagaaaaaat atcctctata catatactga
     7081 atatgttttg tagcggaaca tgttaatata tgtaatgtaa gttttatgtc atgatttgta
     7141 atgactaaat taattgagaa tttgaaggca agtatatttg taagtacttt aactaaaaat
     7201 ttatcaatgt atagccgatt tgacgcgcct aaatttgggt gtgtcaatgg ctgtatgttg
     7261 tttattcttt attacagagt gaatcggatt ggtgaaaatc gaaattttga aatttttacc
     7321 aatccgattt tttcatagaa attaaaaaag ccagcaaggt tattgaaaac cttgttggct
     7381 taattcactt tcatcacaaa ttagtgaatg aagttataac cagcagcttg gctagctgag
     7441 attgtacgtg aagttacaac tcctgggcca taaccatagt tcatttcaga aactcttact
     7501 gaaccattgc tgttaacact ttcaacgtat gcaacgtgac cgtatgcacc ttgagttgtt
     7561 tgcataattg caccagcttt tggtgtattg ttcactgtgt aaccagctct tgcagctgcg
     7621 ttagcccagt tacttgcatt gccccaagtt gaaccgattt taccacctac acgatcaaat
     7681 acgtagtatg tacattgacc agaagtgtat aagttacgtc ctgaagtata accacttgag
     7741 attgaacggc catttgatga tggggccata gttgtagtta cttgaacatt gttgcttgaa
     7801 gtgctgtagc ttgcacctaa accaccagta cggtagctgt ttgtgttgta actattgtag
     7861 ttattgtagt tatatgattg attattattt gagtagttgt tgtaacggct gtagttattg
     7921 tagctataac cattgttgta attgttgtag ttatagttat tgtagccatt gtagtagtaa
     7981 tagctgtagt agccattatc ttggtttaat tgacttggat gccagttacc tttccatgtg
     8041 taatggtagt taccttgtgc atcaatagtg taagtatagc tatatgatgt tggatcattt
     8101 ggattataac catagttatc ttgctcagaa gcatgagctt gatttcctga tgcaattgcg
     8161 attgtagcga atcctgcagt tgcgatagta gctgtagcga ttttcttcat tttaaaaata
     8221 tcctcctaaa aattttaaat ctaaaatatt ttcgtaatgt ccgtgtgaca aaattaatgt
     8281 tataagttat ctctcgtaat taaacgacaa gaaagactat aacagaaatt agtgtccttg
     8341 tgtgctttgt taacgttttg taattttttg ctaatatctt gacacaatag aattttaaaa
     8401 gtatagaaat ttgcattttg caaaacttat aactacggca ttctttgtga aaactgaatg
     8461 tttcgaaaat aagtatgtta caaatttgta atattactga aaattctaaa tgtatatttt
     8521 gtgcataata taggactttt aatcagaaaa tgcataaaaa ttcgacacga acgatcaagt
     8581 ttctttgatt atgaaagctt tggtatttgg ataaaaatgt atatttaatg gataaaatat
     8641 cctaatttag cataaaaaaa tgttttaata aaagtattat ttgatataat cgatttatgt
     8701 tttgttactg ctaaaaaaca tgtggcgata taattggtag tgaatattag atgttgacaa
     8761 ttgatttgag aaagacaaac aggagtaaat caatatattt gtatatgtga ggatgtaaga
     8821 tgacagataa ttattcacta catattttta aaagtatgaa aatgagtagt gtgaaggaag
     8881 caaacttaaa aattatatat tggctacaag gtacaggtgt agtttcaatc aatctacaac
     8941 aatatgatgt aaaaagaaat gatgtcaccg ttattatgtt gaatgatttg tatcagattg
     9001 atggtcatga tgatagtgta tgttgtgttg ttgaagtaag tgcaaagaca tttttgaagt
     9061 ttatgaatgc aaactatatg atgcgtggca agatattaac aaatgaggtt gctagcactt
     9121 ttagaatctt gattaagtat ttaatctaca gcaaaattaa acaacagcct tataatgcta
     9181 atgataagat tattaattac atgtgtgttg aattaatgtc attaaataca tacgatggta
     9241 gtcgtcattt agtagccgaa gaagtgcacg attatttaac aaacaaccac cataaaaaga
     9301 taaataggaa agatgtcatt aatcaagtta gtatcacaaa caaagcttta agtgacatgt
     9361 ttaaagcgac accttatagt aattttattc aatatttaaa tcatattaga ctggagcatt
     9421 gcttaattga tattttaact tctaagaagc ccattgaaga aatcgcaagt agtcatggtt
     9481 ttaatcatta ttctcgtttt atacacctct ttaaagaaac gtatggtgac actcctaaat
     9541 taattagaaa aagatatagt ccaacatctc attcaattaa ccattcccaa ttagttgaaa
     9601 ttgataaaaa tatacttgaa ttatttgatg atactaatca aagttcttca agtatgcgcg
     9661 agattgatat accttttgag cctacaaaaa ggagtcaaat gtatcaacct aaaaacatct
     9721 atattaaagg aagtaatttt tattggatgg attactatac tattaaacaa atcattcaaa
     9781 gattaggtgt taatcctgaa aacttgcata taattgttac aatcgacaca agcaatgagc
     9841 tatcgattga acaaatcact ttattacttc aaaagatagt gaattacaat gtaaatgtag
     9901 tatttcgtat taaacatgaa tataaggaat tgttaacgag tactgaaaga ggcaagatag
     9961 aaaagctagt agctacaatt tttaatatga cttttgagag taatagatgt aagattgcat
    10021 ttttaattaa cgacttaaat actactgcaa ttcaaaaact gaaacgttta atagataatt
    10081 atataggagt atttgaatta atatatcatc tggaaccaaa tgagttgaat acgcgctatg
    10141 ataaagaaat tgatcatcta atagactatt ttatcttacc gctaagacaa atagaacagg
    10201 tatctattgc acgttctaaa attatatgtg atgtagattt gattaatgag aataatgact
    10261 taaaagaaaa aatcacaatt tctgatatta ataaggttac tgaacttttg acaaattata
    10321 caaaatttca aggacttatt atgcacatgt caattataaa tgaagcgagc aaagaaataa
    10381 attcgactag attatcaata ttcattttta tcataaatat acttaatcaa ttacgaggga
    10441 ttgttattta tcaaaatgac acgatgattg taacgaagtt caaacatgaa gtacaatgtg
    10501 tcatttgttt gccagccgca ttgttaaatg agaattcaga cgctatacgt ttatcgtgta
    10561 agggtcttca acaatttagc catgctaaaa ctaaacaaat tgttttaagt atagataaag
    10621 ataatcatac ttccgaaaat ggtgtacttg tgaatgatat tatgcaacaa cacagttatt
    10681 ggaaagctaa ttttatagaa agaaatattt atgatcattc attaatggtc tcaagcaata
    10741 gtattgttca tttgaaatat catcttgaga tataggcatg gtttaagaga ggttttaaag
    10801 atgtctaaat ttaaagttaa gcgtttaact gcacacatac taatgttgaa agtcattaat
    10861 gatatgttga aatattcatt tcatctcact ttgactcaag tgaaactatt aaatctatta
    10921 gttaaatatg ataattctga ttccaatagc gcttcaatag ataggttatt aaaaatgaaa
    10981 gaaatccaat ctaagatggc acttcttcaa atgttaagtt atttaaacaa tcatcaatgg
    11041 ctattgaaag gaagagatca aagggatcaa cgtaaattga ctatttcgat taaaaaaatg
    11101 catatagata aaatagaata tatgaataat gagcttagtg actatattga acgttatttt
    11161 ggtcaatata catttgattt tagttgtgac tatgtatcgt atttattgtc gtcacaagaa
    11221 ttgttgcgaa atctaaagcg ttatttaaat atgtgtcaat tattattaga agagttatac
    11281 gttttaggaa tattaaatct gcataaaggt caattgacgg ttaaagaatt acagggtgaa
    11341 ttccatcacc cgatatttgc ggttagtccg attttaaagt gtttaatttc gaaaggatta
    11401 gtaaaaaaag agagatgtga attagatgaa aggcgtgtta ttgtaacaat caagcgagaa
    11461 aagttttcta aagtcactat gcttattcaa gcatgttata attatcttga aaagggaata
    11521 caagttaagc ttaataataa atagttaatc acttgtattt catataccta tgaagaatag
    11581 tttatagttt taagtgggag ggatattatg attttagata atgtgaatcc aaatgattta
    11641 tttccaactg aaaaaaaggg tccgtcagtg ttaggaataa ttgagtatca agttcaaggt
    11701 gagaatgaat ttgaaggggc atttatagca acaaatgaaa gattaattat gaatgtagat
    11761 atgaatggcc aattttatta tagaagtatt agttataatg aaatagagaa gatagattat
    11821 gatggtcaaa ctataatgtt caaatttaat attggtaatg tcccaatgca tgatattaaa
    11881 agtgataacg ttgaaatgtt tgttgaatat gtaaaacaac atatgatagt ataatgtcaa
    11941 tgtatgtagg ttgataagaa gagtttgaat gataactcat tgcatttaaa gataaatggc
    12001 atgcgttatg atttaaagct cttctttttt tatattttat aaattttgtg agcaagccat
    12061 caaattaata taaaaaatat caaatcaaac acgttgatat agattaaaat tttaaaagtt
    12121 tacatatcag ttaagataca aaatattcag actaataatt ttcaatttgg caaaatatct
    12181 taaacatcaa attattataa gaaataaatg tatttaacca tattctagta ataaaaatat
    12241 tgaattttta tacttatttg tttagaatga actttataac atagttggat agagtttcga
    12301 tttaataaat tacatgtgaa ccttgctaca acaagatgtg catcagagga gtggtttaat
    12361 aatgagtaaa attaatgaca ttaatgattt agtcaacgca acatttcaag ttaagaagtt
    12421 tttcagagat acaaaaaaga agttcaattt gaactatgaa gaaatttata ttttaaatca
    12481 tattttaaga agtgagtcta acgaaatctc atctaaagag attgctaagt gctcagagtt
    12541 caaaccttac tatttaacta aagctttaca aaagctaaaa gatttaaaat tgttatcaaa
    12601 gaaaagaagt ttacaagacg aaagaacagt tattgtttat gttacagata cacaaaaagc
    12661 aaatattcaa aaactgattt cagaattaga agaatacatt aaaaattaaa tcaaggttaa
    12721 ttgcgtttaa taacattgaa cgataacaat ttattaaaac gaagttattt attcagcatt
    12781 gggacataaa attaacttaa aatttaaata ttgaagatgc tttaattaaa gttaaagact
    12841 agccatacct tatttcagct ttttaagctt gaaacaaggt acactagtct ttttatttta
    12901 atattttctt agaaaatcaa gtttacgatc ataaatattt tctgcgatat agctttggat
    12961 ggtttcaagt attttctcta taatttgtgt gcgataagca aaaattctaa ctgcaaaacc
    13021 atgtgtaggc aattgagaaa tagcaacacg acaatcgaat gtattgctat aagaactaat
    13081 ggtttcataa actgaatcga ttagtttttg gttaacatct tcgtgtatga aataagcaga
    13141 gccataatga gagtaatgtt ccatataacc tatttcattg atcgattgtt tattaggatt
    13201 caataataaa ttatcatatg tgactaactc atcttcaata taaatttcat ttattaaatg
    13261 catatattga tacttgaagg cttcgccagt ttttgaataa ccaggagtta aaatatcagt
    13321 ataaaataat gaactagaat tattgagatt gaacgtattg tgttgataaa atttagcatt
    13381 ttcatatgcg atgattggat cagcgacata ttctaaatat gcgttatctt tcaaattaaa
    13441 agtttgatac tgctcaacat gattggaagg tgtcttgtat atttttgttg caccttgaga
    13501 tgtcaatgtc actttagcgt tatcttcgac attcacattc atacggtaac gatctccatc
    13561 taaataacca ccacctacat tcactatata aaatgtagga atggtagatt gatttagata
    13621 aactggacgt atcactttaa gtgctttttc aaagaaaata tctcttgata ctgatcggtt
    13681 gccatcaaaa aacactgtta aatcaagttg cccagtccat tgttgttcat ccattatgat
    13741 aatcctttga gtaaagtgtc gcgttcaatc caatcgataa cttcatccaa accttcgtcg
    13801 gtttttaagt tagtaaaagt aaatggacgt ttaccacgaa atactttagt atcttcagcc
    13861 atttgttcta atgatgcacc aacataggga gctaaatcag ttttgttaat tacaaagaaa
    13921 tctgacttaa tcataccttg gccaccttta cgtggaatct tttcaccttg agcaacatcg
    13981 ataatataaa ttgaaaagtc aacaagttct ggactaaatg ttgctgctaa gttatcgcca
    14041 ccagattcta tgaaaattag ttctatatcg tcatgacgtt ctaataattc gtctattgct
    14101 gcaaagttca tagatgcatc ttcacgaatc gcagtatgag gacatccacc agtttcaaca
    14161 ccaatgatac gactttcagg tagaactcct gaatttacta atatcttttc gtcttctttt
    14221 gtatatatat catttgtaat aacgccgata ctcatttctt ttgaaagacg ttttacaact
    14281 ttttcaatta attgtgtttt acctgcacct acaggaccac caataccaat tttaatcgga
    14341 tttgccacaa ttataacctc ctatgatatg aaaattctaa cattgacgtt ctcatgcgcc
    14401 atttgattta gttctaaacc aggcgctgtc atgccaaaat ctgcttcttt taattcgaaa
    14461 atctgctttc ttgtttcttc tatataagga atcatgtgag taactatctt ttgaccagca
    14521 gtttgtccaa gtggaatagc acgaacagca ttttgagtta aacttgaaac attttgatat
    14581 aaatagtaat caataatcgt ttcaatatct acacctaaat aatggcctag catagtaaaa
    14641 caaatagctg gatttaactt tgctttctta tcttgcattt gttgatgata ccaagcaatc
    14701 catggactat tataaagttc taaagccaat ttaaccattc gagtccccat ttgttttgca
    14761 ccaacacgtg tttctttagg taagttttga acaaacatca gcttatctat gtgtaatact
    14821 ttttgtgtat catcattttc caatgcatca taaactaaac gcatggctaa accatcagaa
    14881 taggtaagtt gctcttgtaa aaacattttc aaccaagcaa taaaagtatg atcatcatga
    14941 attatatttc gttgaatata tgtttcaaga ccaaatgaat gactgaaagc acctgttgga
    15001 aactgtgaat cacagaactg aaataatctt aagtgtgtat gatcaatcat gagaatgtcc
    15061 tatatgtctg aaagccttat taactttacg gtcttctcga acatatggga tgcctaaact
    15121 ttttaataaa tcttcaacta aataatcata ttgtactagc atttcagtct ctgtaaattg
    15181 tgctggcaaa tgacgatttc ctaattgatg ggctatatct cccatttctt gcaatgttct
    15241 tggttgaatc actaaaagat cttctgaatt aacatccaca ataatcatat tatggtcatc
    15301 tgcgtataaa atatctccat attgtaagtc aataggttgt tttaaacgaa tgcctatttc
    15361 agtgccatgg tctgtaacga ctctttgaat acgtttaacg agatctgaat tttcaaggta
    15421 tactttttcg acgtgctttt gtttttctga atttgacaaa ttggcaatat tgccttggat
    15481 ttcttcaaca atcattctat gttcctccta gaataagaag tatctttgag ttaatggtaa
    15541 ctcagttgct gcattacttg taattttttc tccatctaca tatacttcat atgtttgtgg
    15601 atcaacgtct aatttaggtg ttgcgctgtt atttttcata tctgctttag ataattgtct
    15661 aatattttta actggacgca ccatgcgttt taaatttaat gcacgattga taccattttc
    15721 ataagcagtt ttagacacga atgtcattga cgtacttgta aggtttccgc cgtattgacc
    15781 atacatttta cggtacttca tcggttcaga tgtaggtata gaaccatttg catcgccatt
    15841 tacggcagag ttaattaatc caccttttac aactaattca ggtttaacac caaagaaaat
    15901 tgggtcccat aagacaatgt cagctagttt gcccggctcg atagatccta catattcaga
    15961 aataccatgt gtaattgctg ggttaattgt atatttagcg atataacgtt tgatgcgatt
    16021 attatcatta tgttcaaaat caccatctaa aggaccacgt tgttctttca tgcgatgtgc
    16081 tacttgccat gttcgtgtaa ttacttcacc tacacggccc attgcctgtg aatcggaact
    16141 aatcatactg aatacaccca tatcttgcag aacatcttct gctgcaatcg tttctttacg
    16201 aatacgtgaa tctgcgaatg cgatatcttc aggaatagcc gcatttaaat ggtgagtaat
    16261 cattaccata tctaaatgtt catctacagt attatgtgta taaggcaaag ttggatttgt
    16321 agatgaaggt aaaatatttg aaaatgcagc ggatttaatt aaatcaggcg catgaccgcc
    16381 accagcacct tcagtatggt acatatgaag tacacggtct ttaacagcag ccattgtgtc
    16441 ttccataaat cctgcttcat ttaaagtatc tgcatgtaat gcaatttgaa catcaaattc
    16501 atcagcaaca tctaatgcat gactcaaagc agatggtgtt gcaccccagt cttcatgtac
    16561 ttttaatcca attgctccgg cattgatttg ttcaatgagt gcagttggat ttgttgcttg
    16621 tcctttacct gtaaaaccga cattaatcgg taaaccttcg gcagcttcta acattctatg
    16681 aatatgccat ggacctggag ttacagttgt tgctttagaa ccttctgaag caccagtacc
    16741 accaccaata tgagtcgtaa taccactttc taatgcgacc tctgcttgtt cgggattaat
    16801 aaaatgaaca tgagtatcaa taccaccagc agtgacgatt ttaccttcag cggcaatgat
    16861 atctgttgtt gaacctataa taatgtcgac attatccatt atatctgggt tgccggcatt
    16921 acctatggcg aaaatataac catttttaat gcctatatca gctttaacaa ctttatcgta
    16981 atcgataata acggcattag aaataacaag gtctgcaacg ttcacgtcat cacgtgttac
    17041 acgaggattt tgcgccatac cgtctctaat agatttacca ccaccaaagg tagcttcttc
    17101 accataaact gcatagtctt tttctatttg agcaaataga ttcgtatcac ctaaacgaat
    17161 agaatctcca acagtaggac cgtataagct cgtatattga ttttgcgtca ttttaaagct
    17221 catgatcttt ttcctccttt tttattcacg ttttcatcac cgttatctcc gaatacacct
    17281 gcatattcat cattttcatc agttgggcga tagacacgtg actcatcgat aggaccattg
    17341 accataccac gaaaaccaaa aattttacgt ttgccagcat attcaactaa ttgaacttct
    17401 tttttatccc caggttcaaa tcgaacagct gctccagctg gaatatctaa atgttttcca
    17461 tatgccattt cacgttcgaa atctaatgct gcatttgctt cataaaaatg aaaatgtgag
    17521 cccacttgaa ttggtcgatc tcctgtattt tcaacttcga taactgtttc aggatgatgg
    17581 ttattaattt caacctctgt actttttgta ataatttctc ctggtatcat ttgactgcct
    17641 cctttaaaca atagggtgat gtactgtgat taacttagta ccatcgggga acgtagcctc
    17701 gatttcgata tctgtaatca tgtgttcgac accatccatg acatcttctt tgtttagaat
    17761 ttgtctacca taactcatta actctgcaac ggtcttacca tcgcgtgcac cttctaataa
    17821 ttcatcgctg attaaagcta atgcctcagg atgatttagt ttcaaaccac gtgctttacg
    17881 acgacgtgca acttccgccg ccactacaat cattaatttg tcttgctctc gttgtgtaaa
    17941 atgcaaatta aaacccccaa tttcatatta gatacaattt acaaaattta tattaatcct
    18001 aattgttgtg ataaacaagt aatatacaaa gtttaatacg gagtagtaaa aaataaattt
    18061 actatttcgt atttaaaaat atatgattat gattaaaaca aatagcaaaa gatatttagg
    18121 gtttagaaaa tagagttttt aatataactt tttgtaaaat ggtagtatat taatgagtaa
    18181 acattcaaga aaaagggtgg gcattttgaa aatgatagat gtgcttttga aaaatatatc
    18241 tcaagtagtg ttaattagta ataagtggac tggtttgttt atcttgattg gattattcgt
    18301 ggccaactgg acagttggat tagcagctat gctaggtagt atcatagctt atgcatttgc
    18361 acgttacatt aattatagtg aagcagagat taatgatggg ttagccggat ttaatccagt
    18421 gttaactgcc attgcgttaa caatattttt agataagtca ggattagata ttgttataac
    18481 aatgatagca actttattaa cgttaccagt tgctgctgca gtgagagaag ttttaagacc
    18541 atataaagtt ccgatgctga cgatgccttt tgtcattgtg acttggttta caattttact
    18601 ttcaggacag gttaaatttg tagatacatc gttaaagtta atgcctcaaa acattgaaac
    18661 ggttaatttt agcaacaatg atcgaataca tttcattcag tcattatttg agggattcag
    18721 tcaagtattt atcgaagcga gtgtaattgg tggcgtatgt attttaatcg gcatattgat
    18781 agcatcaaga aaagcagcac tcttagctgt tatagctagt ttgttaagct ttatcattgt
    18841 agctctatta ggtggtaatt atgatgatat taatcaggga ttattcggat ataactttgt
    18901 attaatggca atcgcactag gatatacatt taaaacagcg attaaccctt atatttcgac
    18961 ttttttaggt gtgttattaa cagtagtggt gcaacttggt acaacaacat tgcttgaacc
    19021 gtttggctta cctgcattaa cattgccatt tattattgtg acatggattt tattatttgc
    19081 tggtattaaa catgacaaag tagatgcttg atagttaaat caaacctagt attgtttgaa
    19141 tatcacctta aaccatacag cgcattgtat agtttaagat gtgtttttat ggagaaaatt
    19201 aagtgtatac ttaatcgaat tatcagcttt cttttaattg ttcacagcac gttccttttt
    19261 atttttaaag tcgagtgtta aactaggaat aaataattta tattgtgtgt tgtgtggggt
    19321 gactaatatg aatgatatgg ataattcctt tttaataaca acggaaattc aaagaaaatg
    19381 gattgaaaaa ttcaaagcaa ttggagatac atttaaggct aagtctgaat ataatgatca
    19441 acatagccaa tttccatata aaaatattga atggttaatt aaagaaggtt atggaaaatt
    19501 aacgttacca aaagcatatg gtggtgaagg tgcgaccata gaagacatgg ttattttgca
    19561 atcattttta ggcgaacttg atggtgccac agctttatct attggttggc atgtgagtgt
    19621 cgtaggacaa atttatgaac agaaattatg gtctcaagat atgttggagc aatttgctgt
    19681 tgaaattaat aatggtgcat tagttaatag agcagttagt gaagctgaaa tgggtagtcc
    19741 aacaagaggg ggaagaccaa gtacacatgc tgttaaagct gatgatgggt atattttaaa
    19801 tggtgtgaag acatatactt caatgagtaa agcactaaca catattattg ttgctgctta
    19861 tatagaagaa ttagaaagtg ttggtttttt cttagtggac aggaatttgc ctggtgttga
    19921 aattgccgat aattgggacg tattaggtat gcgagcgaca gaaagtcatg atttaatatt
    19981 aaatgatgta aaagtaccat taaaacattt agtggaaaca gagaaaagta aagcgccaaa
    20041 tggttggata ttgcatatac caagctgtta tttaggtata gcacaagctg ctagaaatta
    20101 tgctgtagac tttgcaatcc aacatagccc taatagtatt gaaggaacga ttgcaacatt
    20161 gccaactgtg caacaaaatt tagggaaaat ggaaacgcta ttgttatgtg cgagacaatt
    20221 tttatggagt acagcaatag gctatcaaca atataaagat gacagtcaga taagaaattc
    20281 aacaagtgcg agtaaagtga tggtaatgaa tcaagggctt gaagtgattg atttagcgat
    20341 gagaatagtt ggtgctaaaa gcttagaaat gaatcgacca ttacaacgtt attatcgtga
    20401 catgcgtgca ggattacaca atccacctat ggaagatgca gcatatacaa atattgctaa
    20461 gagtattaca aatacatttt aaatttaaaa aggtaaatcg atcgttgatt ggcataaaga
    20521 gatgacattt gacgttcgga tttacccttt ttttgtgggg atttataggg atgttaagat
    20581 attttgctaa attttttgcg aaaataaaaa aataaataac actagctatt gtaaatgtat
    20641 atgcaatctt gtataatttt ggaataattg ataatcattt tcaataggag gaaattatga
    20701 aaaaactatt attaccatta ataattatgt tattagtgtt agctgcgtgt gggaaccaag
    20761 gtgaaaaaaa taacaaagct gaaactaaat cttataaaat ggacgatggc aaaacggtag
    20821 atattccgaa agaccctaaa cgcattgcag tagttgcgcc aacatatgct ggtggactta
    20881 aaaaattagg tgcaaacatt gtagctgtaa atcaacaagt cgatcaaagc aaagtattaa
    20941 aagataaatt taaaggtgtt acaaaaattg gtgatggcga tgtagaaaaa gttgctaaag
    21001 aaaagccaga tttaattatt gtatactcta ctgacaaaga cattaaaaaa tatcaaaaag
    21061 tagcgccaac agtagttgtt gactataata agcataaata tttagaacaa caagaaatgt
    21121 tagggaaaat tgttggtaaa gaagataaag taaaagcttg gaagaaagat tgggaagaaa
    21181 caactgctaa agacggtaaa gaaattaaaa aagcaattgg acaagatgca acagtgtcat
    21241 tgtttgatga atttgataaa aaattataca cttacggcga taactggggt cgtggtggag
    21301 aagtattata tcaagcattt ggtttaaaaa tgcaaccaga acaacaaaag ttaactgcaa
    21361 aagcaggttg ggctgaagtg aaacaagaag aaattgaaaa atatgctggt gattacattg
    21421 tgagtacaag tgaaggtaaa cctacaccag gatatgaatc aacaaacatg tggaagaatt
    21481 tgaaagctac taaagaagga cctattgtta aagttgatgc tggtacatac tggtacaacg
    21541 atccttatac attagatttc atgcgtaaag atttaaaaga aaaattaatt aaagctgcaa
    21601 aataattcag ctatataagt tagtgaaatg agagtctgaa acatatcaat tttttgatat
    21661 tgtattaggc tctcattttt atagcaagaa agttagagtt ttgtattttt ttaaaaataa
    21721 taagtgccgt tgttatcatt caatttaatt aatgatagat tagtattatt acagctaaag
    21781 tagtatacct gagaaaatag ctcaatgtat ctcttcatta ataagttata tcataattat
    21841 tttaatacat actttatgga agccatatca gggaatggct atcaattaaa gaagaggttt
    21901 aaaaggatta caacagaatg ttatgatttt gtagaaagat atataacaac gttttataaa
    21961 aacataatat tgttaatgga aaatgaaatg taagggggat ttcgagtgac taagaaagtt
    22021 tattttaacc acgatggtgg tgtagatgat ttagtatctc tatttttatt attacaaatg
    22081 gaaaacgttc atttgatagg ggtcagtact attggtgctg attgttattt agagccatct
    22141 ttgagcgcat caataaaaat tattaatcgt ttttcaaatg aagatattca agttgcgcca
    22201 tcatatgaac gaggaaaaaa tccatttcca aaagaatggc gtatgcatgc tttttttatg
    22261 gacgcattgc caattttaaa tgagccagtc aaacacgttg cttcaaatgc gagcgacaaa
    22321 gaagcctttg aagacattat tcaaacttta aagagacaat cagaaaaagt aacattattg
    22381 tttacaggcc cgcttacaga tttagcaaaa gcactacaaa aagattcatc aatcgttcag
    22441 tatatagaaa aaatagtttg gatgggtggt acctttttac caaaaggaaa tgttgaagaa
    22501 cctgagcatg atggttctgc agaatggaat gcatattggg atccagaagc ggttaaaatt
    22561 gtttttgata gcgatataga gattgatatg gttgctttag aaagtacgaa tcaagtaccg
    22621 ctaacgttag atgttagaca aagatgggcg aatgaacgcc aatatacggg cattgatttc
    22681 ttaggagtaa gttatgcagc ggtaccacca ttaacacact ttataacaaa ttcaacttac
    22741 tttttatggg atgttttaac gactgcttat attggtaaca aggacttagt tcattcaatt
    22801 gagaaaaaag tggatgtaat aagttatgga ccaagtcaag gtaagacatt tgagtgtaaa
    22861 gatgggcgca aaattaatgt cataaatcat gtagataaca acgcattttt taattatata
    22921 actgcacttg ctaaaaaagt aaattaacag ctgtgtaaaa taattaaggt tttaatttat
    22981 atagaacaac ttattgtaaa cttttcgttt cttaaagttt acaatggtgc tataataatg
    23041 gtcatgaaat acgaaaggaa gtaaaaaatg acaacaaaac agttagtata tacagcttta
    23101 atgacagcga ttatcgctat tctaggattg gtaccggtaa ttccactacc attttcttca
    23161 gtaccaattg tacttcaaaa cattggtatt ttcttagcag gtgtgatttt aggacgtaaa
    23221 tatggcacat taagtgttat cgtcttttta ttattagtag ttgctggctt gccactgtta
    23281 tcaggcggtc gcggtggtat tggtgtattc gcaggtcctt cagcagggtt tttactatta
    23341 tatccagttg tagcattcat gattggtgcg attcgtgata gattcatcaa tgaaattaat
    23401 ttctggattt tattcgttgg tattttagtt tttggtgtta tagcattaga tgttattggt
    23461 acattgatta tgggcatgat tattaacata ccatttacga aagctatttc aatttcatta
    23521 gcttatttac ctggtgatat attaaaagca attgtagcaa gtttgattgg tacagcttta
    23581 cttaatcact cgcagtttcg tcaaattatg ggattaaaat aatcatattt aagatagtaa
    23641 agtaattgaa taagccgctt tgaaatttat aaatgtgaaa ggagtaggtg tcaatggcta
    23701 gtataagtat gtcagatata tattgtaacg gtactatatt tgaaaatgac gacgagcagt
    23761 tgatttattt aacgccttct tttccacaac gatacacaag caacacatgg atatataaaa
    23821 agacgcctac cgaagagcga tggctgaaag acttagaacg tcaacatcaa ttacatacaa
    23881 atcaaggttc aaatcattat gcgtttagtt tcccggaaaa tgaacaactt gataatcatt
    23941 ggatggctat gtttaaagat atgaattttg aactaggtat tatggaattg tatgccatag
    24001 aaagtgatgc gcttgccaat ttgccgcgta actctgacgt tgaaattgcc atcgttgacg
    24061 agtcgcatat agatgcctat ttaaaagttg catatcaatt tagtttgcca tttggaaaag
    24121 actatgcaga tgcacatgaa aaaatggtaa gggaacatta tcaaaaagat gtgattaaac
    24181 gcttagtagc ttatttaaat aatgaaccta ttggcgttgt agatgtcatt gaaagtgaaa
    24241 attacattga attagatgga tttggtgtat tagaacaatt tcggcaccaa ggaattggat
    24301 ctacaattca atcgttgata ggtgaatacg ccatatcaaa aaatcacaaa ccaatcatat
    24361 tagttgcaga tggtgaagat acagcaaaag atatgtatgc aaagcaaggt tatgtttacc
    24421 aatcattttg ttatcaaata ttaaaagaag atattggaaa ttaacgattg atgataggtt
    24481 tgtattagaa taaaaaagca gtaagctggt ttcgagtaga aatcaactta ctgcttttta
    24541 aattgttttg agctacttat acttataaaa atagtgcttt tatattgttg attcatgtgg
    24601 aatatcgttc attatgacac actataatga atatgttatt gttcagaatc aatgatacgt
    24661 tctggatgac tgtatatatt aaagccacca tttcgaataa atccaattgc cgtaatattt
    24721 aggtcattag ctaaggttac agcaagcgtt gtcggagccg atttagataa aataacgcca
    24781 acaccaattt tcgcggcttt aattaaaatt tctgatgaaa tacgtccact gaaaattaat
    24841 actttatctc ggacagtaat atgtcgctga atacaaaatc catataattt atctagagcg
    24901 ttatgtctac caatgtcttg tcgatgtaca aaaaatgtca aaccatcgct tatagcagca
    24961 ttatgtaagc cacctgtttc ttggtaaata tgacttgcac tttgtaatcg agtcatcatg
    25021 ttaataattt gtattggagt taaagtgatt ttagacatag atgttttagc gatagcagca
    25081 tcattttgaa aataaaactc acgactcttt ccacaacaag atgcaatcat tcgttttgtg
    25141 gaatattgaa agcgatcgcc taaatcttta ttaagttcaa catgggcaaa acctttacta
    25201 tcatcaatca gtacagattt taattcatct cgctttaaaa tggcaccttc cgaagccaga
    25261 aatccaatga ctaactcctc aaggtttgtt ggactgcata taacagtcgc aaattcttca
    25321 ccattcacca taattgtaag tggaaattct gtcacatatt gatctgttgt attgaataat
    25381 tttccatctt catatctaac aattggttga cctaaagata catctttgtt cattatctaa
    25441 cccctttaat tagcttgaac tttattttaa agcaatttgc ttaaaaattt aacatatttg
    25501 cttaagtttg aaatttgatt gatgaaaatt aatagtgagc aatcagtttg atttaaattg
    25561 atttcgagaa tgtacataat agggcatcaa ttaataaata tcaatcttat gaaaatttga
    25621 caattgtttg aatcaatata taaacaggca acggttcttt tcaaatataa tagtaagtgt
    25681 ataatgaaaa tgtaaatatt attaaaagtg ggggttcatt caatgaaaat gaaacgttta
    25741 tttgctgttg tgattgcaat gcttttagta ttagctggtt gctctaattc taacgataat
    25801 aatgaaagta aaaaagatga tgcagccaat ggtaagaaac aagaaattca agttgcagcg
    25861 gcagcaagtt taacagatgt aaccaagaaa ttagctacag aatttaaaaa agagcataaa
    25921 aatgctgata ttaaatttaa ctatggtgga tcaggggcat taagaaaaca aattgaatca
    25981 ggcgcacctg ttgacgtatt tatgtctgca aatactaaag atgtagatgc attaaaagac
    26041 aagaataaag cacatgatac ttataaatat gcgaaaaata gtctagtatt aattggtgat
    26101 aaagattcaa attacacttc agtaaaagac ttaaaagaca atgataaaat agcattaggt
    26161 gaagtgaaaa ctgtaccagc aggaaaatat gcgaaacagt atttagataa caataactta
    26221 tttaaagaag tcgaaagtaa aatcgtttat gctaaagatg taaaacaagt attaaattat
    26281 gttgaaaagg gtaatgcgaa acaaggtttt gtgtataaaa ctgacttata taaacaaaat
    26341 aaaaaaattg atactgtaaa agtaattaaa gaagtagaac ttaagaagcc aatcacatac
    26401 gaagctggtg ctacatcaga tagtaaatta gcaaaagagt ggatggaatt cttaaaatca
    26461 gataaagcta aagaaatatt aaaagaatac cactttgcag cataaggagt tgtaatccat
    26521 gcctgactta acaccttttt ggatatcaat acgagttgct gtaatcagta cgattattgt
    26581 aacggtttta ggtattttta tatctaaatg gttgtatcgt cgtaagggtt cgtgggttaa
    26641 agtattggaa agtttattga tattacctat tgttttgccg ccaacggtat taggttttat
    26701 tctattaatc atcttctcgc caagaggacc aatcggtcaa ttctttgcga atgtactaca
    26761 tttacctgta gtgttcactt tgacaggtgc tgtgatagca tctgtcattg ttagttttcc
    26821 actaatgtat caacatactg tgcaaggctt cagaggtata gacacgaaaa tgattaatac
    26881 agctagaacg atgggagcaa gtgaaacgaa aattttcctc aaattaattt taccattagc
    26941 taaacgctct attttagcag gtataatgat gagttttgct cgtgcattag gtgagtttgg
    27001 tgctacatta atggttgcag gatatattcc aaataaaacc aatacactac ctttagaaat
    27061 atacttctta gtggaacaag gtagagaaaa tgaagcgtgg ttatgggtat tagtgctagt
    27121 cgcattctct attgtggtta tatctacaat taatttattg aataaagata aatataagga
    27181 ggtcgactag atgcttaaaa tcaatttgaa atatcaatta aagaacactt taattcgcat
    27241 caatatagat gataccgaac caaaaattta tgcagttcgt ggtccatctg gcattggtaa
    27301 aactactgtt ttaaatatga ttgccggatt acgtaaagca gatgaagcta ttatcgaagt
    27361 gaatgggcaa ttgctaactg atacggcaaa aaacgtgaat gttaaaattc aacaacgacg
    27421 tattggatat ctgtttcaag actaccaatt gtttcctaat atgacggtct ataaaaatat
    27481 tacttttatg gctgaaccat ctgaacacat cgatcaatta attcaaactt taaacattga
    27541 tcatttgatg aaacaatatc ctatgacatt gtcaggtgga gaggcacaac gtgtagcact
    27601 tgcacgtgca cttagcacga aaccagattt aattttatta gatgaacctt tttctagttt
    27661 ggatgatact acaaaagatg agagtattac attagttaaa cgtattttca acgaatggca
    27721 aataccaatc atatttgtga cacattcaaa ctatgaagca gaacaaatgg ctcatgaaat
    27781 tattacaatt gggtaatcat ttatttgcca ttaaagagtt tagaacgtat ttaaaattgt
    27841 agaagtgaat gcttctatca gcattttaat gatgttttaa actctttttt aggggcagtt
    27901 ttttgagaga cattgacgcg cgtcatataa tgaaagtaat gataaaaaga aaggataact
    27961 taatgtgagt caagaacgtt attcaaggca aattttattt aaacaaatag gtgaaatagg
    28021 tcaaagcaaa ataaatcaaa aatgtgcgtt gattattggt atgggcgcat taggtacaca
    28081 tgtggctgaa ggacttgtta gagcaggtat tgctaaacta atcattgttg atagagatta
    28141 tattgaattt agtaatttac aaagacaaac attgtttact gaagaagatg ctttgaaaat
    28201 gatgcctaaa gtggttgcag ctaaaaagca tttgctagcg ttacgtagtg atgttgatat
    28261 tgatgattat attgcccatg tggattatta ttttttagaa acacatggac aggacgttga
    28321 cgttattatt gatgcaaccg ataactttga aacacgacaa ctgattaatg attttgcata
    28381 taaacatcgt ataccttgga tttatggtgg tgttgtacag agtacatata cagaagctgc
    28441 atttatacct ggtaaaacac cttgctttaa ctgtttggta ccacaattgc cagcattaaa
    28501 tttaacatgt gatacagtag gggtcattca acctgccgtg acgatggcaa caagtttaca
    28561 attaagagat gcgatgaaag tattaacgga acaaccaatt gacacaaaaa taacttatgg
    28621 cgatatttgg gaaggtagtc attattcatt tggtttcagt aaaatgcaac gttcagcctg
    28681 tacaacttgt ggagatatac caagttatcc gtatttaaac aaaaatgaac aacgttatgc
    28741 aacattgtgt ggtagagaca ctgtacagta tgaaaatgca tcaattacac acgacattct
    28801 tgttcaattt ttaaaacaac atcaactaaa ttatcgcagt aattcgtata tggttatgtt
    28861 tgaatttaaa ggacaccgca ttgttgcttt taaaggtgga aggtttttaa tacatggcat
    28921 gacacgcaca tcagatgcca cacatctaat gaatttattg tttggataaa aaaagataag
    28981 acaaaaggag tgtaatatta tgggcgaaca tcaaaacgtt aaattgaatc gtacagttaa
    29041 agcagccgta ctaacggtat cagatacgag agactttgat acagataaag gtggtcaatg
    29101 cgtgcgccaa ttgttacaag cagatgacgt tgaagtgagt gacgcacatt atacaattgt
    29161 gaaagatgaa aaagtagcca tcacgacgca ggtgaagaag tggttagaag aagatattga
    29221 tgtcatcatt acgactggtg gaacgggtat tgcacaacgt gatgtgacga ttgaagcagt
    29281 aaaaccactt ttaactaaag agatagaagg ctttggggaa ttgtttagat atttgagtta
    29341 tgttgaagat gttggcacgc gtgcattatt gtctcgtgct gtagcaggta cagttaataa
    29401 taaattgata ttttcgattc caggatcaac aggcgcagtt aaattagcat tagaaaagct
    29461 cattaaacca gaattaaatc atctgattca tgagcttaca aaataattta ttgacctgat
    29521 tggcgttgaa aatctccaga tttaccgcca gacttgcttt caaggtaggt ttcgccaata
    29581 atcatacctt tatcaactgc tttcgtcatg tcgtaaatgg ttaaagccgt tgctgatgca
    29641 gcggttaaag cttccatttc aacaccggtt ttgccagttg tagagacagt tgtttgaatg
    29701 tttaaagtat aaaggggtgc atttgtttca tcccagctga agtgaacatc tatgccagtc
    29761 aatggtaatg gatggcacat cggaataatt gttgatgtat ttttggcagc cataatacca
    29821 gcgatttgag cagtgttcaa tacattgcct ttggtattgg tgttattaga aatctgctta
    29881 taaatagttt cattcacagt aatgcttgaa tgagcgacag cagttctttt tgtaatttgt
    29941 ttgtctgata catcgaccat tttggcgtgg ccttgttgat taatatgagt aaactcagtc
    30001 attttacccc tcctagtgca tctagtatat catgaaaaaa taaaagtttt ggagatgatt
    30061 tttaatggta gtagaaaaaa gaaacccaat cccagttaaa gaagcaattc aacgtatcgt
    30121 taatcagcag agttcaatgc cggcaattac ggtagcactt gaaaaaagtc taaatcatat
    30181 cttagcagaa gatattgtag ctacttatga tataccaagg tttgataaat caccttatga
    30241 tggttttgca attcgcagtg ttgattcaca aggggcaagt ggtcagaatc gcattgagtt
    30301 taaagtgatt gatcatattg gtgcaggttc agtttctgat aaattagttg gggatcacga
    30361 agcggtgcgt attatgactg gagcacaaat acctaatggc gcagatgctg ttgttatgtt
    30421 tgaacaaacg attgaactag aagatacatt tacaattcgt aaaccatttt ccaaaaatga
    30481 aaatatatct ttaaaaggtg aagaaacaaa gacaggcgat gttgttctaa aaaaaggaca
    30541 agtaattaat ccaggggcta ttgcggtcct tgcaacatat ggctatgcag aggttaaagt
    30601 tattaagcaa ccgagcgtcg ctgttattgc aacaggaagc gaattattag atgttaatga
    30661 tgtattagaa gatggaaaaa ttcgtaactc taatggtcca atgattcgtg ccttagcaga
    30721 aaaattaggt cttgaagttg gtatttacaa aacacaacaa gatgatttag atagtggtat
    30781 acaagtcgtt aaagaagcta tggaaaaaca tgatatcgtt attacaacgg gcggagtttc
    30841 tgttggagat tttgactatt tacctgagat ttataagact gtaaaggcga aagtgttatt
    30901 taataaagta gcaatgcgtc ctggtagcgt aacaacggtt gcatttgcag atggaaaata
    30961 tttgtttgga ttatctggaa atccatcagc ttgttttaca ggatttgaac tatttgtgaa
    31021 accagctgtt aaacatatgt gtggcgcact agaagtcttc ccgcaaataa ttaaagcaac
    31081 attaatggaa gattttacca aggcaaaccc attcacacga tttatacgtg ctaaagcaac
    31141 gttaacaagt gctggagcta ctgtagtacc ttcaggattc aataaatcag gtgcggttgt
    31201 agcgattgca catgctaact gtatggtcat gttaccagga gggtcacgtg gttttaaagc
    31261 gggtcataca gtagatatta ttttgactga atctgacgct gctgaagagg aacttctttt
    31321 atgattttac aaattgtagg gtacaaaaag tctggtaaga caacattgat gaggcatatt
    31381 gtctctttct taaagtcaca tggttataca gttgctacta ttaaacatca tgggcatggt
    31441 aaggaagata ttcaattaca ggattcagac gtcgatcaca tgaagcattt tgaagcgggg
    31501 gcagatcaaa gtattgtaca aggatttcaa tatcagcaaa ctgtaacacg tgtagataat
    31561 caaaatctta ctcaaattat tgaaaaatct gttacaattg acaccaatat cgtattagtt
    31621 gaaggcttta aaaatgctga ttttgaaaaa gtcgtagtct atcgagatga agaagagttg
    31681 caagtattac aacaattgtc gaatgtttgt tatagcatta atgttaggga gcatgaagat
    31741 tttacagcat ttgagcaatg gttattaaat aaaattaaaa atgattgtga tacacaatta
    31801 acatagagga ttgaaatgaa tgaaacaatt tgaaatcgtg acagaaccga tacaaacaga
    31861 acaatatcgt gaattcacta taaatgaata tcaaggtgca gtagttgttt ttaccggtca
    31921 tgttcgcgaa tggactaaag gcgtcaaaac ggaatattta gaatatgaag cgtatattcc
    31981 aatggctgaa aagaaattgg cacaaattgg agatgaaata aatgaaaaat ggcctggaac
    32041 gataacaagt attgttcata gaatagggcc attacaaatt tcagatatcg ctgtattaat
    32101 tgcagtttct tcaccgcatc gtaaagatgc ctatcgagca aatgaatatg caattgagcg
    32161 tataaaagaa attgttccga tttggaaaaa agaaatttgg gaagatggtt caaaatggca
    32221 agggcatcaa aaagggaatt atgaagaagc gaagagggag gaataagaga gatgaaggta
    32281 ctttacttcg cagaaattaa agatatatta caaaaagcac aggaagatat tgtgcttgaa
    32341 caaggattga ctgtacaaca atttgaagat ttattgtttg aacgttatcc gcaaatcaat
    32401 aataaaaagt ttcaagttgc tgtaaatgag gaatttgtac aaaaatcaga tttcattcaa
    32461 cctaatgata ctgttgcatt aattccaccg gttagtggag gttaagggag catgaaagca
    32521 ataattcttg caggtggtca ttcagtacga tttggtaagc ccaaagcttt tgcggaagtg
    32581 aacggtgaga ccttttatag tagagtaatt aagacattag aatcaacaaa tatgttcaat
    32641 gaaattatta ttagtacaaa tgcgcaattg gcaacgcaat ttaaatatcc aaatgttgtt
    32701 atagatgatg agaatcataa tgataaaggt ccattagcag gaatttatac aatcatgaag
    32761 caacatcctg aagaagaatt gttttttgtc gtttctgttg atacaccaat gattactggt
    32821 aaagctgtaa gcacgttgta tcagttttta gtttctcatc ttattgaaaa tcatttagat
    32881 gtcgcagctt ttaaagaaga tggacgtttt attccaacaa ttgcatttta tagtccgaat
    32941 gcattaggcg ctataactaa agcactacat tctgataatt acagttttaa aaatgtatat
    33001 catgaattat caacggatta tttggatgtc agggatgtag atgcgccctc atattggtac
    33061 aaaaatataa attatcagca tgatttggac gctttaattc aaaaattgta agccgttagg
    33121 aggtccacaa atggtagaac aaataaaaga taaactagga cgtcccatcc gtgacttacg
    33181 gttatctgtg acagatcggt gtaactttag gtgtgattat tgcatgccta aagaggtatt
    33241 tggagatgat ttcgtatttt tacctaaaaa tgaactgtta acgtttgatg aaatggctag
    33301 aatcgctaag gtatatgcag aattaggtgt aaaaaaaata cgcattacag gtggagaacc
    33361 attgatgcga cgggatttaa atgtacttat agctaaatta aatcaaatcg atggtattga
    33421 agatattggt ttgactacaa atggtttgtt attaaaaaag catggacaaa agttatatga
    33481 tgctgggctg cgcagaatta atgtcagttt ggatgctatt gatgatacgc tatttcaatc
    33541 aatcaataat cgtaatatta aagcgactac gattttagaa caaattgatt acgcgacgtc
    33601 tattggtttg aatgtaaaag taaatgttgt tatacaaaaa ggtattaacg atgatcaaat
    33661 tataccaatg cttgaatatt ttaaagataa acatatagag attcgattta tagaatttat
    33721 ggatgttggt aatgataatg gatgggattt cagcaaagtt gtaactaaag atgaaatgct
    33781 tactatgata gaggagcact ttgaaatcga tcctgtagaa ccaaaatatt ttggggaagt
    33841 agcaaaatat tatcgccata aggataacgg tgttcaattt ggtttgatta caagtgtttc
    33901 acaatcattt tgttctacat gtacacgcgc aaggctgtca tcagatggga agttttacgg
    33961 atgtttattt gcaactgtcg atggatttaa cgttaaagcg tttattcgtt ctggcgtgac
    34021 cgacgaagaa ttaaaagaac aatttaaagc tttatggcaa ataagagatg atcgatattc
    34081 agatgagaga actgctcaaa cagttgccaa tcgtcaacgt aaaaagataa acatgaatta
    34141 tattggtggt taatgtgtag gaaccactac atattaaatc attagagatt ctttaatatt
    34201 tctgtcttac tccctaaaat acaatattat ttattaaagt aaaaacggtc atatctatgc
    34261 cagatttaat agaaatgatc gtttttaatg tttttacaaa tcggcggggc cccaacatag
    34321 aagctgacag aaagtcagct tacaataatg tgcaagttgg cggggcccca acacagaagc
    34381 tgacaaaagt cagcatacaa taatgtgcaa gttggggaac ggggccccaa catagagaat
    34441 ttcaaaaaga aattctacag acaatgcaag ttggggaaca acgaaataaa attttatgaa
    34501 aatatcattt ctatcccact cttaagaatc actacataat aaatctttag tggttcttta
    34561 acattgatgt cacactccat gtcattgagt tgtaatatat cttttttagg tataaatgtt
    34621 gtcgaataaa caacaagttg tccaaaagat ataaatctaa acaagatata gccagcaatt
    34681 taatatttgt aat
//
LOCUS       DALMNS010000016        34336 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.016, whole genome shotgun sequence.
ACCESSION   DALMNS010000016 DALMNS010000000
VERSION     DALMNS010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 34336)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34336)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34336
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.016"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(359..763)
                     /locus_tag="O6Y56_000634"
     CDS             complement(359..763)
                     /locus_tag="O6Y56_000634"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDB5573925.1"
                     /translation="MNTLNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVA
                     ALKTGFVKVKFHDGTEYIAVSDGFVEVRKDKVSIIVQTAETAREIDVERAKLAKARAE
                     SHLENDDDNTDIHRAERALERANNRLRVAELK"
     gene            complement(783..2195)
                     /gene="atpD"
                     /locus_tag="O6Y56_000635"
     CDS             complement(783..2195)
                     /gene="atpD"
                     /locus_tag="O6Y56_000635"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017636767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDB5573926.1"
                     /translation="MGIGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLT
                     LEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDL
                     KEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVG
                     KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEP
                     PGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQP
                     TLATEMGQLQERITSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDATTNLERKLTE
                     MGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILGMDELSDE
                     DKQTVERARRIQFFLSQNFHVAEQFTGQKGSYVPVKTTVANFKDILDGKYDHIPEDAF
                     RLVGSMDDVIAKAKDMGVEV"
     gene            complement(2217..3083)
                     /locus_tag="O6Y56_000636"
     CDS             complement(2217..3083)
                     /locus_tag="O6Y56_000636"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500821.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDB5573927.1"
                     /translation="MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTP
                     YMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLVITSDKGLAGAYSANVLKKLITD
                     IEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDLY
                     SEEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGHLSSYEFEPDKESILSV
                     ILPQYVESLIYGTILDAKASEHATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQ
                     ITEIVGGSAALE"
     gene            complement(3114..4622)
                     /locus_tag="O6Y56_000637"
     CDS             complement(3114..4622)
                     /locus_tag="O6Y56_000637"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDB5573928.1"
                     /translation="MAIKAEEISALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGL
                     NDVMAGELVEFHNGVLGLAQNLEESNVGVVILGPYTGITEGDEVKRTGRIMEVPVGEE
                     LIGRVVNPLGQPIDGQGPINTTKTRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIG
                     RGQRELIIGDRQTGKTTIAIDTILNQKDQGTICIYVAIGQKDSTVRANVEKLRQAGAL
                     DYTIVVAASASEPSPLLYIAPYSGVTMGEEFMFNGKHVLIVYDDLTKQAAAYRELSLL
                     LRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGGGSITALPIIETQAGDISAYVPTNV
                     ISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYREL
                     ESFAQFGSDLDEFTASKLERGKRTVEVLKQDQNKPLPVEHQVLIIYALTKGYLDDIPV
                     VDITRFEDELNHWAESNATELLNEIRETGGLPDAEKFDTAINEFKKSFSKSE"
     gene            complement(4644..5183)
                     /locus_tag="O6Y56_000638"
     CDS             complement(4644..5183)
                     /locus_tag="O6Y56_000638"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDB5573929.1"
                     /translation="MVKVANKYAKALFDVSLDTNNLETINEELTVINEAVKDKIEQLK
                     MVDSNPTQTAEQRRELINGVFTDINPYIKNMMYVLADNRHISLIADVFKAFQSLYNGH
                     YNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVL
                     DGSVRNDLVQLQRKFRRVN"
     gene            complement(5183..5704)
                     /locus_tag="O6Y56_000639"
     CDS             complement(5183..5704)
                     /locus_tag="O6Y56_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDB5573930.1"
                     /translation="MTETANLFVLGAAGGVEWGTVIVQVLTFIVLLALLKKFAWGPLK
                     DVMDKRERDINRDIDDAEQAKLNAQKLEEENKQKLKETQEEVQKILEDAKVQARQQQE
                     QIIHEANVRANGMIETAQSEINSQKERAIADINNQVSELSVLIASKVLRKEISEQDQK
                     ALVDKYLKEAGDK"
     gene            complement(5902..6114)
                     /gene="atpE"
                     /locus_tag="O6Y56_000640"
     CDS             complement(5902..6114)
                     /gene="atpE"
                     /locus_tag="O6Y56_000640"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDB5573931.1"
                     /translation="MNLIAAAIAIGLSALGAGIGNGLIVSRTVEGVARQPEARGQLMG
                     IMFIGVGLVEALPIIGVVIAFMTFAG"
     gene            complement(6157..6885)
                     /gene="atpB"
                     /locus_tag="O6Y56_000641"
     CDS             complement(6157..6885)
                     /gene="atpB"
                     /locus_tag="O6Y56_000641"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDB5573932.1"
                     /translation="MDHKSPLVSWNLFGFDIVFNLSSILMILVTAFLVFLLAIICTRN
                     LKKRPTGKQNFVEWIFDFVRGIIEGNMAWKKGGQFHFLAVTLILYIFIANMLGLPFSI
                     VTKDHTLWWKSPTADATVTLTLSTTIILLTHFYGIKMRGTKQYLKGYVQPFWPLAIIN
                     VFEEFTSTLTLGLRLYGNIFAGEILLTLLAGLFFNEPAWGWIISIPGLIVWQAFSIFV
                     GTIQAYIFIMLSMVYMSHKVADEH"
     gene            complement(6906..7358)
                     /locus_tag="O6Y56_000642"
     CDS             complement(6906..7358)
                     /locus_tag="O6Y56_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HDB5573933.1"
                     /translation="MNRIDTTNRLYYHLVCMSGTVFMIDISHTEAYKMSRFYNIFKQF
                     IQYYFYLIIILGGLYLYTHHAFILGLIIGVTGSAINTCIFECYLAKAKRPDTMHISTG
                     NMWRYLVAIIACMIWYFNKAHVSIIGIIIGLMISYVVVIIRPLLKVSK"
     gene            complement(7426..8553)
                     /gene="wecB"
                     /locus_tag="O6Y56_000643"
     CDS             complement(7426..8553)
                     /gene="wecB"
                     /locus_tag="O6Y56_000643"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HDB5573934.1"
                     /translation="MKKIMTIFGTRPEAIKMAPLVKALEQEKMLEPIVVVTAQHREML
                     DSVLSTFEIKPKYDLNIMKSGQTLSEITSKSITQLEQVIQLEKPDMVLVHGDTMTTFA
                     GGLAAFYNQVPIGHVEAGLRSYDKYSPFPEEVNRQLVGVLADLHFAPTKNAASHLLSE
                     GKYSESVVVTGNTAIDAMKYTVDDNYKSNIMDKYHDKKFILMTAHRRENIGQPMENIF
                     KAVRRLIDEYTDLALVYPMHKNPKVREVAQKILGSHDRIELIEPLDVVDFHNFAKKSY
                     FILTDSGGIQEEAPSFNKPVLVLRSVTERPEGVEAGTLKVIGTNKQNVYQAAKELIDD
                     ERLYHQMSEASNPYGDGFASERIVNHIKYYLNLITEKPSDF"
     gene            complement(8577..9206)
                     /gene="upp"
                     /locus_tag="O6Y56_000644"
     CDS             complement(8577..9206)
                     /gene="upp"
                     /locus_tag="O6Y56_000644"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017636774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDB5573935.1"
                     /translation="MSKVHVFDHPLIQHKLSYIRDVNTGTKEFRELVDEVGMLMAYEV
                     TRDLELQDVDIETPVTKMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGL
                     YRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGAKNIRFMCL
                     IAAPEGVEKMHEAHPDVDIYIAALDEKLNDKAYITPGLGDAGDRLFGTK"
     gene            complement(9234..10472)
                     /locus_tag="O6Y56_000645"
     CDS             complement(9234..10472)
                     /locus_tag="O6Y56_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDB5573936.1"
                     /translation="MSYITKQDKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQG
                     SVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAEHVNVQPHSGSQANMAVY
                     LVALEMGDTVLGMNLSHGGHLTHGAPVNFSGKFYNFVEYGVDKDTERINYDEVRKLAL
                     EHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYAD
                     FVTTTTHKTLRGPRGGMILCKEEYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALEN
                     NFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDS
                     VGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEKAFEEVAKIISLALKNSKDEE
                     KLQQAKERVAKLTAEYPLYQ"
     gene            complement(10499..11023)
                     /locus_tag="O6Y56_000646"
     CDS             complement(10499..11023)
                     /locus_tag="O6Y56_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01440 family protein"
                     /protein_id="HDB5573937.1"
                     /translation="MKDLTMLLDELKDMSFFNKGDICLIGCSTSEVIGEKIGTVGSME
                     VAETIFNALDVVSKETGVTFAFQGCEHINRAITIEKSQFNPLTMEEVSVVPDVHAGGS
                     LATYAFQHMKDPIVVEHITVPCGIDIGQTLIGMHIKHVCVPVRTSVKQVGKAIVTIAT
                     SRPKKIGGERAKYQ"
     gene            complement(11130..11549)
                     /locus_tag="O6Y56_000647"
     CDS             complement(11130..11549)
                     /locus_tag="O6Y56_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight protein arginine
                     phosphatase"
                     /protein_id="HDB5573938.1"
                     /translation="MKILFVCTGNTCRSPLAESIAKEVMPNHQFESRGIFAVNNQGVS
                     NYVEDLVEEHHLAETTLSQQFTEADLKADIILTMSYSHKELIEAHFGLQNHVFTLHEY
                     VKEAGEVIDPYGGTKEMYVHTYEELVSLILKLKDIIC"
     gene            complement(11546..12592)
                     /locus_tag="O6Y56_000648"
     CDS             complement(11546..12592)
                     /locus_tag="O6Y56_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006190783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HDB5573939.1"
                     /translation="MDTKIWDVREYNEDLQQYPKINEIKDIVLNGGLIGLPTETVYGL
                     AANATDEEAVAKIYEAKGRPSDNPLIVHIHSKVQLKDFTYTLDPRVEKLMQAFWPGSI
                     SFILPLKPGYLCRKVSGGLSSVAVRMPSHPVGRQLLQIINEPLAAPSANLSGRPSPTT
                     FNHVYQDLNGRIDGIVQAEQSEEGLESTVLDCTSFPYKIARPGSITAAMITEILPNSI
                     AHADYNDTEQPIAPGMKYKHYSPNTPLTIITDIESKIGNDGKDWSSIAFIVPSNKVAF
                     IPSEAQFIQLCQDDNDVKQASHNLYDVLHSLDENENISAAYIYGFELNDNTEAIMNRM
                     LKAAGNHIIKGCEL"
     gene            complement(12676..13512)
                     /gene="prmC"
                     /locus_tag="O6Y56_000649"
     CDS             complement(12676..13512)
                     /gene="prmC"
                     /locus_tag="O6Y56_000649"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000248725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDB5573940.1"
                     /translation="MVNYKEKLDEAIHLTQQKGFEQTRAEWLMLDVFQWTRTDFVVHM
                     HDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETEEVMLH
                     FLQQLEDDATIVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQI
                     QFLTGDALKPLIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAI
                     YESIIEDLPHVMEKGSPVVFEIGYNQGEALKSIILSKFPDKKIDIIKDINGHDRIVSF
                     KW"
     gene            complement(13499..14575)
                     /gene="prfA"
                     /locus_tag="O6Y56_000650"
     CDS             complement(13499..14575)
                     /gene="prfA"
                     /locus_tag="O6Y56_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDB5573941.1"
                     /translation="MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKT
                     VDVYRNYKAKKEELADIEEMLSETDDKEEVEMLKEESSGIKAELPNLEEELKILLIPK
                     DPNDDKDVIVEIRAAAGGDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKE
                     ISFSVSGNGAYSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNE
                     DLKIDTYRSSGAGGQHVNTTDSAVRITHLPTGVIATSSEKSQIQNREKAMKVLKARLY
                     DMKVQEEQQKYASQRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHL
                     EEIIDALTLSEQTDKLKELNNGEL"
     gene            complement(14576..15175)
                     /locus_tag="O6Y56_000651"
     CDS             complement(14576..15175)
                     /locus_tag="O6Y56_000651"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HDB5573942.1"
                     /translation="MYETYHSGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKP
                     AIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDVIGIDEVQFFDDEIVSIVE
                     KLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLIN
                     GKPAKIDDPIILVGANESYEPRCRAHHIVAPSDNNKEEL"
     gene            complement(15521..15775)
                     /locus_tag="O6Y56_000652"
     CDS             complement(15521..15775)
                     /locus_tag="O6Y56_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HDB5573943.1"
                     /translation="MKQGIHPEYHQVIFLDTTTNFKFLSGSTKTSSEMMEWEDGKEYP
                     VIRLDISSDSHPFYTGRQKFAAADGRVERFNKKFGLKSNN"
     gene            complement(15893..17209)
                     /gene="rho"
                     /locus_tag="O6Y56_000653"
     CDS             complement(15893..17209)
                     /gene="rho"
                     /locus_tag="O6Y56_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDB5573944.1"
                     /translation="MPERERTSPQYESFHELYKNYTTKELTQKAKTLKLTNYSKLNKK
                     ELVLAIMEAQMEKDGNYYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEI
                     KRGDKVTGKVRKPKDNEKYYGLLQVDFVNDHNAEEVKKRPHFQALTPLYPDERIKLET
                     ETRNYSTRIMDLVTPIGLGQRGLIVAPPKAGKTSLLKEIANAISTNKPDAKLFILLVG
                     ERPEEVTDLERSVEAAEVVHSTFDEPPEHHVKVAELLLERAKRLVEIGEDVIILMDSI
                     TRLARAYNLVIPPSGRTLSGGLDPASLHKPKAFFGAARNIEAGGSLTILATALVDTGS
                     RMDDMIYEEFKGTGNMELHLDRKLSERRIFPAIDIGRSSTRKEELLISKSELDTLWQL
                     RNLFTDSTDFTERFIRKLKKSKNNEDFFKQLQKSAEESTKTGRPII"
     gene            complement(17456..18883)
                     /locus_tag="O6Y56_000654"
     CDS             complement(17456..18883)
                     /locus_tag="O6Y56_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HDB5573945.1"
                     /translation="MRDYTKQYINGEWVKSNSNETIEVINPATEEVIGKVAKGNKADV
                     DKAVEAADNVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERV
                     HYQMGLNHFVAARDALDNYEFEERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAA
                     FAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRM
                     MSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTG
                     QVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYI
                     NKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYND
                     LDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDLPFGGYKQS
                     GLGREWGDYGIEEFLEVKSIAGYFK"
     gene            complement(19122..19457)
                     /locus_tag="O6Y56_000655"
     CDS             complement(19122..19457)
                     /locus_tag="O6Y56_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDB5573946.1"
                     /translation="MEVCPYLEETFKILGRSWNGLIINYLSRCNDCSAHFSDMKRDLK
                     TITPRALSLKLSELAQWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSYV
                     DLTDQRTAK"
     gene            complement(19546..20805)
                     /locus_tag="O6Y56_000656"
     CDS             complement(19546..20805)
                     /locus_tag="O6Y56_000656"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDB5573947.1"
                     /translation="MAQEVIKIRGGRTLNGEVNISGAKNSAVAIIPATLLAQGHVKLE
                     GLPQISDVKTLVSLLEDLNIKASLNGTELEVDTTEIQNAALPNNKVESLRASYYMMGA
                     MLGRFKKCVIGLPGGCPLGPRPIDQHIKGFKALGAEIDESSTTSMKIEAKELKGTHIF
                     LDMVSVGATINIMLAAVYATGQTVIENAAKEPEVVDVANFLTSMGANIKGAGTSTIKI
                     NGVKELHGSEYQVIPDRIEAGTYMCIAAACGENVILNNIVPKHVETLTAKFSELGVNV
                     DVRDERIRINNNAPYQFVDIKTLVYPGFATDLQQPITPLLFMANGPSFVTDTIYPERF
                     KHVEELKRMGANIEVDEGTATIKPSTLHGAEVYASDLRAGACLIIAGLIAEGVTTIYN
                     VKHIYRGYTDIVEHLKTLGADIWTETV"
     gene            complement(21271..22131)
                     /locus_tag="O6Y56_000657"
     CDS             complement(21271..22131)
                     /locus_tag="O6Y56_000657"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002468309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase"
                     /protein_id="HDB5573948.1"
                     /translation="MPLVSMKEMLIDAKENGYAVGQYNINNLEFTQAILEASQEENAP
                     VILGVSEGAARYMSGFYTIVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFT
                     SVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELGTVGGQEDDVVADGIIYADPKE
                     CQELVEKTGIDALAPALGSVHGPYKGEPKLGFKEMEEIGLSTGLPLVLHGGTGIPTKD
                     IQKAIPFGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKGKI
                     KEFGTSNRAK"
     gene            22349..22870
                     /locus_tag="O6Y56_000658"
     CDS             22349..22870
                     /locus_tag="O6Y56_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2529 domain-containing protein"
                     /protein_id="HDB5573949.1"
                     /translation="MSKILNTQLIGIFNRLEKQSLEIQMAAQCLIQAIGGEGYVYVKG
                     YDDLQFFESFILHSDERLKSSRKLDAIKDFNEIDSTDRVLLFAPFYNEQVALDIQKLI
                     DLDIDVVLISNKPKTDDFPDHLVHFIDLSTPRPIVYTEDYDKIVQPHAMALNYVYYDI
                     YTQMIEMTRDLEL"
     gene            complement(22979..24589)
                     /locus_tag="O6Y56_000659"
     CDS             complement(22979..24589)
                     /locus_tag="O6Y56_000659"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HDB5573950.1"
                     /translation="MTKFIFVTGGVVSSLGKGITASSLGRLLKDRGLNVTIQKFDPYL
                     NVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLNKFSNVTAGKVYSHVLKKE
                     RRGDYLGGTVQVIPHITNEIKERLLLAGESTNADVVITEIGGTTGDIESLPFIEAIRQ
                     IRSDLGRENVMYVHCTLLPYIKAAGEMKTKPTQHSVKELRGLGIQPDLIVVRTEYEMT
                     QDLKDKIALFCDINKESVIECRDADSLYEIPLQLSQQNMDDIVIKRLQLNAKYETQLD
                     EWKQLLDIVNNLDGKITIGLVGKYVSLQDAYLSVVESLKHAGYPFAKDIDIRWIDSSE
                     VTDENAAEYLADVDGILVPGGFGFRASEGKISAIKYARENNVPFFGICLGMQLATVEF
                     SRNVLGLEGAHSAELDPATSYPIIDLLPEQKDIEDLGGTLRLGLYPCSIKEGTLAQDV
                     YGKAEIEERHRHRYEFNNDYREQLEANGMVISGTSPDGRLVEMLEIPTNDFFIACQFH
                     PEFLSRPNRPHPIFKSFIEASLKYQQNK"
     gene            complement(24925..25455)
                     /locus_tag="O6Y56_000660"
     CDS             complement(24925..25455)
                     /locus_tag="O6Y56_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000701491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit delta"
                     /protein_id="HDB5573951.1"
                     /translation="MKIQDYTKQMVDEKSFIDMAYTLLNDKGETMNLYDIIDEFRALG
                     DYEYEEIETRVVQFYTDLNTDGRFLNVGENLWGLRDWYSVDDIEEKIAPTIQKFDILD
                     ADDEEDQNLKLLGEDEMDDDDDIPAQTDDQEELNDPEDEQVEEEINHSDIVIEEDEDE
                     LDEDEEDFEDEEDFKA"
     gene            complement(25567..26427)
                     /locus_tag="O6Y56_000661"
     CDS             complement(25567..26427)
                     /locus_tag="O6Y56_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5573952.1"
                     /translation="MAKELCFEGITLKAFDEQYRSAINDFDLNERQQIYSSLPKEVID
                     DAINDADRIANVAINDKNEVVGFFVLHRYYQHEGYDTPENVVYIRSLSINEKYQGFGY
                     GTKIMMSLPQYVQGVFPDFNHLYLVVDAENDNAWNLYERAGFMHTATKEEGPIGKERL
                     YYLDLDSKHVSSLKLEEESRSEVTNVHIINLMIDGQKVGFIALEQIGERMNIAAIEVD
                     KSYRFNGIGSSALRQLPTYLRKNYDNLNVITMILFGENNDFKPLCLNSNFVEIEQTDD
                     YVVFEKYLNY"
     gene            26852..27655
                     /gene="coaW"
                     /locus_tag="O6Y56_000662"
     CDS             26852..27655
                     /gene="coaW"
                     /locus_tag="O6Y56_000662"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II pantothenate kinase"
                     /protein_id="HDB5573953.1"
                     /translation="MKVGIDAGGTLIKIVQEQDNQRTFKTELTKNIDQVVEWLNQQQI
                     EKLCLTGGNAGVIAENINIPAQIFVEFDAASQGLGILLKEQGHDLADYIFANVGTGTS
                     LHYFDGQSQRRVGGIGTGGGMIQGLGYLLSQITDYKQLTDMAQHGDRNTIDLKVRHIY
                     KDTEPPIPGDLTAANFGHVLHHLDADFTPSNKLAAVIGVVGEVVTTMAITVAREFKTE
                     NIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLGK"
     gene            complement(27785..28456)
                     /locus_tag="O6Y56_000663"
     CDS             complement(27785..28456)
                     /locus_tag="O6Y56_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2750 domain-containing protein"
                     /protein_id="HDB5573954.1"
                     /translation="MSYKAYLFFRDILINECIYFASKNKKLVRLNYKSEAYVGVWTEE
                     SVAVSFLTSRDIPFDKVVKMDVDRFATYELDELFDEQDHIIMNQTMEEEGHLLNVVAV
                     TQEVMTELDKIRIKEFVQDVAKYDEVYGLTKKGSKQFILISENDSDEKKPHIMPVWSI
                     KNRALKVRDEDFEECDLITIEGSVFGEWLDELRDDHKAVAIDLKTGVVGTIVSAQKLS
                     NELTF"
     gene            complement(28854..30047)
                     /locus_tag="O6Y56_000664"
     CDS             complement(28854..30047)
                     /locus_tag="O6Y56_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HDB5573955.1"
                     /translation="MTNNGNEPNLTLSDLYDKDVVYTSRPSYISNPWLKPDEHQSNFL
                     TGRELLIANQLPVIVHEASATDKLHKLFQVIGKDVPNSTYTFNNQQSYENLIKQLAHK
                     ENKKIYFQYIHDETILNQQYYALDKTLFVALNNKARIPEWTNGKFLPKRKVVKIEQFE
                     NEIKNWEFPFVIKPGDDLPTAGGYGVMICYHDADLQKAITRIKEATAETNSLIIEQKI
                     EEKANYCVQFAYSESLGIQYLGAATQLTDKYGFYNGNENTTNVPEHVIEAGRQIMENG
                     VNQGFFGVAGFDLLVDEDDNVYAIDLNFRQNGSTSMLLLANELNSGYQKFYSYHSKGD
                     NTHFFNTILKYVKEGSLYPLSYYDGDWYGEDKVKSRFGCIWHGDSKETVLENERAFLA
                     ELEHY"
     gene            complement(30047..31231)
                     /locus_tag="O6Y56_000665"
     CDS             complement(30047..31231)
                     /locus_tag="O6Y56_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HDB5573956.1"
                     /translation="MSEKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLID
                     RLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLAEYDALPGLGHACGHNIIGTAS
                     VLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVIDQIDIALMIHPGNE
                     TYKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHIKKGQRV
                     HGVILDGGKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGP
                     IQNGVNEFIKTPKLDDLFAKYAEEVGEAVIDDDFGYGSTDTGNVSHVVPTIHPHIKIG
                     SRNLVGHTHRFREAAASVHGDEALIKGAKIMALMGLELITNQDVYQDIIEEHAHLKGN
                     GK"
     gene            31542..32012
                     /locus_tag="O6Y56_000666"
     CDS             31542..32012
                     /locus_tag="O6Y56_000666"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDB5573957.1"
                     /translation="MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQ
                     PNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMGCQTGFYVSFINHDNYDDVLNIV
                     EATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK"
     gene            complement(32164..32514)
                     /locus_tag="O6Y56_000667"
     CDS             complement(32164..32514)
                     /locus_tag="O6Y56_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573958.1"
                     /translation="MNILRYLLGIGFSVIGVLHFTRERQFRNIIPKCLPLRKTAVLVT
                     GIFEILFGLALLIKRPSQCLKNTINLFLLAVFPANIYMAVKKLPLGDKQLPTWQLYLR
                     LPMQFVLMGLIKKL"
     gene            complement(32528..33829)
                     /locus_tag="O6Y56_000668"
     CDS             complement(32528..33829)
                     /locus_tag="O6Y56_000668"
                     /EC_number="2.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-nucleoside phosphorylase"
                     /protein_id="HDB5573959.1"
                     /translation="MRMIDIIEKKRDGHTLTTEEINFFIDGYVKGDIPDYQASSLAMA
                     IYFQDMNDDERAALTMAMVNSGDMIDLSDIKGVKVDKHSTGGVGDTTTLVLAPLVAAV
                     DVPVAKMSGRGLGHTGGTIDKLEAIDGFHVEIDEATFVKLVNENKVAVVGQSGNLTPA
                     DKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGSGAFMKTLEDAEALA
                     HAMVRIGNNVGRNTMAIISDMNQPLGRAIGNALELQEAIDTLKGQGPKDLTELVLTLG
                     SQMVVLANKAETLEEARALLIEAIDSGAALEKFKTFIKNQGGDETVIDHPERLPQAQY
                     QIEYKAKKSGYVTELVSNDIGVASMMLGAGRLTKEDDIDLAIGIVLNKKIGDKVEEGE
                     SLLTIHSNRQDVDDVVEKLDSSITIADHVVSPTLIHKIITE"
     gene            complement(34109..>34336)
                     /locus_tag="O6Y56_000669"
     CDS             complement(34109..>34336)
                     /locus_tag="O6Y56_000669"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498700.1"
                     /note="catalyzes the formation of D-glyceraldehyde
                     3-phosphate and acetaldehyde from
                     2-deoxy-D-ribose-5-phosphate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-deoxyribose-5-phosphate aldolase"
                     /protein_id="HDB5573960.1"
                     /translation="GADFVKTSTGFAGGGATAEDVKLMKDTVGADVEVKASGGVRNLE
                     DFNKMVEAGATRIGASAGVQIMQGLEADSDY"
BASE COUNT        10437 a         6822 c         4944 g        12133 t
ORIGIN      
        1 aactctagtc aaccttgccg gcggggcccc aacaaagaga aattggaaca ccaatttcta
       61 caaacaatgc aagttggggg cggggcccca acacaaaagc tggcggaaag tcagcttaca
      121 ttaatgtgca agttggggtg ggacaacgaa ataaattttg taaaaatatc atttctgtcc
      181 cactccctcc tatttttaaa tacacattag ctgtggttaa tgataaagaa ccactacatc
      241 ataaatcttt aatggttctt tatcaattcc tcccgccctc ttatgttttg tatttttaaa
      301 tcaatataat tcaaaaaagg gtcgaagata tgaaatcaca tcttcgaccc tttatttact
      361 attttaattc agccacacgc aaacggttat ttgctctctc taaagctctt tcggctctat
      421 gaatatcagt attgtcgtca tcattttcca agtgagactc tgctcttgct ttggctaatt
      481 tagctctttc aacatcaatt tctcttgcag tttctgcagt ctgaacaatg attgaaactt
      541 tatcttttct aacttcaaca aagccatcgc ttacagcaat atattcagtt ccatcgtgaa
      601 atttcacttt tacaaagcct gtttttaaag cagctacagt tggaatatgt ccactcatga
      661 cacctatctc accagctgtt gtttgcataa caacgagttc aacattatca cgattgtaaa
      721 cagaaccatt aggagtgaca atatctaggt ttaatgtatt cattatccat tcctcctaat
      781 tgttatactt caacacccat atctttagct tttgcaataa catcatccat gctaccaact
      841 aaacggaatg catcttctgg aatatggtca tatttaccat ctaagatatc tttaaagttt
      901 gcaactgttg tcttaacagg tacataagaa cctttttgac cagtaaattg ttccgctacg
      961 tggaagtttt gagataagaa gaattgaatt ctacgtgcgc gttcaactgt ttgtttatct
     1021 tcatcagata attcgtccat acctaagata gcaatgatat cttgtaattc acggtatttt
     1081 tgaagtgttg attgtacatc acgagctact tcataatgtt cttgacctac aattgatggt
     1141 tccaatgctc ttgatgtaga cgctaatgga tccacggctg gataaatacc catttcagtt
     1201 aatttacgtt ctaagtttgt agttgcatct aaatgggcaa acgctgtcgc tggcgctggg
     1261 tcagtatagt catcggcagg tacgaatacc gcttgaatag aagtaactga tccttttgtt
     1321 gtagacgtaa tacgttcttg taattgtccc atttcagtag caagtgttgg ttggtaacct
     1381 actgcagaag gcatacgacc taataatgca gatacctcag aaccagcttg tgtaaatctg
     1441 aaaatgttat cgatgaataa taatacgtct tgaccttgtt cgtcacggaa atattcagcc
     1501 attgttaaac cagataatgc aacacgcata cgtgcaccag gtggctcatt catttgcccg
     1561 aataccatgg ctgttttctt aattacacca ctgtcactca tttcgaagta taaatcgtta
     1621 ccttcacgag tacgttcacc tacaccggcg aatacagaaa taccaccgtg ctcttgagcg
     1681 atgttgttaa ttaattcttg gattaatact gttttaccta caccggcacc accgaacaat
     1741 ccgattttac cacctttaat ataaggtgct agtaaatcta ctactttaat acctgtttct
     1801 aaaatttgaa cttctgttga aagttcatcg aatgctggtg cttgacgatg gataggatcg
     1861 cggcgaacag aatcactaat ttcttcttta aggtcaattg tttcacctag tacattaaat
     1921 acacgaccta atgtttcgtc accaacaggt acactaattt ctttgcctgt atcttttaca
     1981 tccatgcctc tttggacacc atcagttgaa tccatcgcaa ttgtacgaac aacgtcgtca
     2041 cctaattgca gcgcaacttc taatgttagt tgtattgtac cttcttcttt aggcacatca
     2101 ataaccaagg cgttattaat tttaggaact tcgttatgtt caaatcgaac atcaattaca
     2161 ggacccataa cttgagttac acggccaatt cccatgctat tttcctcctt taaatattat
     2221 tcaagcgctg cggaaccacc aacaatttca gtaatttgtt gcgtaatttc tgcttgtctc
     2281 gctctgttat attctaatga taagtcatca ataagttcag ttgcattatc agtggcattt
     2341 ttcatcgcag tcatacgtgt tgcatgctca cttgcttttg cgtctaatat tgttccgtaa
     2401 atcaaactct caacatattg aggcaagatt acacttaaga tagattcttt atctggctca
     2461 aattcataag aagacaaatg accgtgtccc ttactagaat cctcttgaga taatggtaat
     2521 acttgtctag atgtaggctt gttttcaaga acgctgacat aatgactata gtatatattt
     2581 aattcatcaa tttcttcttc actgtataag tctatagcat ggttagctag tgcttgaaca
     2641 gatttgaaag aaggttgatc aggtacgtct acttgagaat actcaatgtc ataacctcta
     2701 ttttttagga aatcaacacc ttgttgccct aaaactacaa tactgtattc gctactatct
     2761 tgatgtttcg cttcaatatc agtaatcaat tttttaagca cgtttgcact atatgcacct
     2821 gctaaacctt tatcactcgt gataactaaa tatccacttc tagtaatttt acgaggtctt
     2881 agcattggat ggtttgtatt gctacttgcc cctgcaactg cagtaattgc atcttgcatt
     2941 ttatccatat atggtgtgaa ttgttttgta tttttttcag ctctacgaag ttttgaactt
     3001 gataccatgt tcatcgcttt cgtaatctgc ttcatttttt tggttgattt tattcgagta
     3061 tctatttctt taagagaagc cactatctca ccaccttata ctaaacttgt ttattattca
     3121 gatttgctaa agcttttttt gaattcgtta attgctgtgt caaacttctc agcatctggt
     3181 aagccaccag tttctctgat ttcatttaac agttcagtag catttgattc tgcccagtgg
     3241 tttaactcgt cttcaaaacg tgtgatatct acaactggaa tatcatctaa atatcctttt
     3301 gttaatgcat aaataatcaa cacttggtgt tcaactggta atggtttgtt ttgatcttgt
     3361 tttaagactt caacagtacg tttaccacgt tctaatttac ttgcagtaaa ttcatcaagg
     3421 tctgaaccga attgtgcaaa tgattcaagt tctctgtatg acgctaagtc aagacgtaac
     3481 gtaccagcaa ctttcttcat tgctttaatt tgtgcagatc caccaacacg agatacagat
     3541 tgtccggcat taatcgctgg tcttacacct gagaagaata aatcagattg taagaagatt
     3601 tgtccatctg taattgaaat aacgtttgtt ggtacataag ctgaaatatc accagcttgt
     3661 gtttcgataa ttggtaatgc agtaattgaa ccgccaccta agtcatcgtt taattttgct
     3721 gctctttcta ataatctact atgtaagtag aatacgtcac ctgggtatgc ttcacgacct
     3781 ggaggtctac gtaataataa tgataactca cgataagctg ctgcttgttt agttaaatca
     3841 tcataaacga ttaaaacatg tttaccgtta aacatgaatt cttcacccat tgttacacct
     3901 gaatatggtg caatatataa taatggagaa ggttcagaag ctgatgctgc tacaacaata
     3961 gtgtagtcta aagcgcctgc ttgtcttaac ttttcaacat ttgctcttac tgttgaatcc
     4021 ttttgaccaa tagcaacata gatacaaatc gtaccttgat ctttttggtt caaaattgtg
     4081 tcaattgcaa ttgttgtttt acctgtttga cggtcaccga tgatcaactc acgttgacct
     4141 ctaccaattg gtactaaagc atcaattgct ttgatacctg tttgtaatgg ctcatctact
     4201 gatttacgat ccattacacc agtagctttt ttctctactg gacgtgtttt agttgtgtta
     4261 atcggtcctt gtccatcaat aggttgtcct aatggattaa caactcttcc gattagttct
     4321 tcacctactg gtacttccat gatacgacca gtacgtttaa cttcgtcacc ttcagtaata
     4381 cctgtgtatg gtcctaaaat aaccacaccc acgtttgact cttcaaggtt ttgggctaaa
     4441 ccaagtacgc cgttatggaa ttctactagc tcaccagcca taacgtcatt taatccgtga
     4501 attaatgcaa taccatcacc aatttgtaat acagtaccaa catcagttac ggacatttct
     4561 gactcataat tttcaatttg tgagcgaagt aatgcactga tttcttcagc ttttatggcc
     4621 atctatgtca ctcctcttta taattaatta actcttctaa attttctttg taattggaca
     4681 agatcatttc taacactacc atctaataca gttgtgccga ctttaactct aaatccacca
     4741 attaaatctg gattaatttt tgtatctaca ataactttag ataacttcgt ttgttgagtt
     4801 actagtttga caatcttatc taactcttct tgactcaatt catatgttga ctcaattgtt
     4861 gcaaaatctt gattgtagtg tccgttatat aagctttgga acgccttgaa tacgtcagct
     4921 attaatgaga tatgtctatt atctgctaac acgtacatca tatttttaat gtatggatta
     4981 atgtcagtaa atacaccatt aatcaactca cgacgttgtt ctgctgtttg agttggatta
     5041 ctgtcaacca ttttcaattg ctcaatttta tcttttactg cttcatttat aactgttaat
     5101 tcttcattaa tagtttctaa attatttgta tctaatgaca cgtcaaataa tgctttagca
     5161 tacttgttag ctacttttac cattatttat cgcctgcctc ttttagatac ttgtcaacca
     5221 atgctttttg gtcttgttca gaaatttctt ttctaagaac tttagaagca attaacactg
     5281 atagttcaga tacttgatta ttaatatctg caatggcacg ttctttttgg ctattgattt
     5341 cactttgtgc tgtttcaatc ataccgtttg cacgtacgtt tgcttcatga ataatttgtt
     5401 cttgctgttg acgtgcttga accttagcat cttctaaaat cttttgaact tcttcttgtg
     5461 tttctttaag tttttgttta ttttcttctt caagtttctg tgcatttaac ttagcttgtt
     5521 ctgcgtcatc gatatctctg ttaatatctc tttcacgttt atccattaca tctttcaatg
     5581 gaccccatgc gaacttttta agtaacgcaa gtaacacgat gaaagttagg acctgtacaa
     5641 tcacagtacc ccactcaacg cctccagctg caccaagaac gaataagtta gctgtttcag
     5701 tcacgggttc atgacactcc tttcattaaa ataatcgcta gtgttatata gaaaaaaacg
     5761 acgaggttag gacctactga atttatgcga taggcatggt gcgttcatat ctcaactatt
     5821 taataaagtt caaagatatt actatatatg catcatgaat tatgtcctat gcgctttgtc
     5881 ccgacctctt ttatctgtta attatccagc aaatgtcatg aatgcaatta ctacaccgat
     5941 gataggtaat gcctcaacta aacctacacc aatgaacatg atacccatta attgaccacg
     6001 tgcttctggt tgacgtgcta caccttcaac tgttcttgaa acgattaaac cgttaccgat
     6061 acctgctcct aatgctgata aaccaattgc gattgctgct gcgattaaat tcataattta
     6121 atttcctcct gtgattgtat ataattattg aaatttttag tgttcatctg ccactttatg
     6181 tgacatataa accatcgaaa gcataataaa gatatatgct tggattgttc ctacaaatat
     6241 tgaaaatgct tgccaaacaa ttaatcctgg gatactaata atccaacccc atgctggttc
     6301 gttaaagaat aagccagcaa gtaatgttaa tagtatctca cctgcaaata tgttaccgta
     6361 caaacgcaga ccaagcgtta atgttgaagt gaactcttca aaaacattaa taattgccaa
     6421 tggccaaaac ggctgtacat aacctttaag atattgtttc gtaccacgca ttttaattcc
     6481 ataaaagtga gttaacagta ttatcgttgt agacaacgtt aaagtcactg ttgcatcagc
     6541 tgttggtgat ttccaccaca atgtgtgatc tttcgttact atagaaaacg gaagacctaa
     6601 catattagct ataaaaatgt acagaatcag cgttactgct aagaagtgga attgaccacc
     6661 ttttttccaa gccatgttac cttcaatgat tcccctcacg aaatcaaaaa tccattcaac
     6721 gaaattttgt ttgccagttg gtcttttttt caaattacgc gtacaaatga tagcaagtag
     6781 aaaaacaaga aacgccgtaa caagtatcat caatatactt gataaattga aaacgatatc
     6841 aaaaccgaat aaattccaac tcacgagcgg ggatttgtga tccataatct cacctctttc
     6901 ttaatttatt tgctcacctt tagtaaagga cgtatgataa ctacaacata tgaaatcatt
     6961 aaaccaataa ttataccgat tatacttaca tgcgctttat taaagtacca aatcatacag
     7021 gcaataattg caactaagta tcgccacata tttccagttg aaatatgcat agtgtctggt
     7081 cttttagctt tagctaaata gcattcaaaa atacatgtgt tgattgcaga accagtaaca
     7141 ccaatgatta atcctaagat aaatgcatgg tgtgtataaa ggtataatcc tcccaatatt
     7201 attattagat aaaaataata ttgaatgaac tgtttaaaaa tgttgtagaa acgactcatt
     7261 ttatatgcct ccgtgtgact gatatcaatc atgaaaaccg ttccactcat acaaactaaa
     7321 tgataatata ggcgatttgt ggtgtcaatt ctattcaaat tgttgtaaaa aaataagcat
     7381 agtcagacac aatttagaca caattagaca aaaagtctat ttttcttaga aatcgcttgg
     7441 tttttcagtg attaaattca aataatactt aatatgatta actattcttt ctgaagcaaa
     7501 tccatcaccg taaggattag atgcctcaga catttgatga tataatctct catcatcgat
     7561 taattctttt gcagcttgat acacattttg cttatttgtt ccaatgactt ttaatgtgcc
     7621 agcttcgaca ccttcaggac gttctgtaac gcttcgcaaa actaaaactg gcttattaaa
     7681 tgatggcgct tcttcctgaa ttccacctga atctgtcaaa ataaaataag attttttagc
     7741 aaaattatgg aaatctacta cgtccaaagg ttcaatcaat tcaattctgt catgactacc
     7801 taaaatcttt tgagccacct ctcgaacttt cgggttttta tgcattggat atactagtgc
     7861 taaatcagta tactcatcta ttaagcgtct aaccgcttta aatatatttt ccatgggttg
     7921 cccgatattt tctcgtcggt gtgctgtcat aagaatgaat tttttgtcat ggtatttatc
     7981 catgatgtta gatttataat tgtcatcaac tgtatatttc atagcatcaa tcgctgtatt
     8041 accagtgaca acaacacttt ctgaatattt cccttcactt aacaaatgcg atgcagcatt
     8101 tttagtaggt gcaaaatgta agtcagctaa tacaccaact aattgtctat tcacctcttc
     8161 cggaaaaggt gaatatttat cataacttct aagccctgct tcaacgtgtc caatcggcac
     8221 ttggttataa aatgccgcta aaccacctgc aaatgtcgtc atcgtatcac catgtacaag
     8281 taccatgtct ggtttttcta attgaatcac ttgttctaat tgagtgattg atttagaagt
     8341 tatctcagaa agtgtctgtc ctgatttcat aatattcaaa tcgtattttg gtttgatttc
     8401 aaaggtactt aatactgaat caagcatttc tctatgctgt gctgtaacaa caacaattgg
     8461 ctcgagcatt ttttcttgtt ccaaagcttt aactaaagga gccatcttta tggcttcggg
     8521 tcttgttcca aatatggtca taatcttttt catcaaacta cttatctccg attcttctat
     8581 ttagtaccaa acaatctatc tccagcgtcg cctaaccctg gtgtgatata tgctttgtca
     8641 tttagctttt catcaagtgc agcaatataa atatctacat ctggatgtgc ttcatgcatc
     8701 ttttctacgc cttctggtgc tgcaattaaa cacatgaagc gaatattttt agcgccacgt
     8761 ttcttcaatg aagtaatagc ttcaattgct gatgcgcctg ttgctaacat aggatcaaca
     8821 acaatgattt gtctttcagt aatatcttga ggtaacttag caaaatactc tacagccttt
     8881 aatgtttcgg gatctcgata caaaccgata tgtccaactc ttgctgcagg tactaaactt
     8941 aaaataccat cagtcatacc taaaccagct cttaaaattg gaacgatagc taatttttta
     9001 ccagctaatc gtttagccgt cattttagtt acaggcgttt caatatcaac atcctgaagc
     9061 tctaagtctc tagttacttc atatgccatc aacataccaa cttcgtctac aagttctcta
     9121 aattctttag tacctgtatt tacatctcta atatagctta gtttgtgttg aattaatgga
     9181 tgatcgaaaa cgtgtacttt actcataaaa attactccta tctttgtgta tgtttattga
     9241 tatagaggat attcagctgt taatttcgca acgcgttctt tagcttgttg taatttttct
     9301 tcatctttac tatttttcaa tgctaaactg atgatttttg caacttcctc aaaagctttt
     9361 tcatcaaatc cacgcgttgt tgcagcaggt gtacctaaac gtataccact cgttacaaaa
     9421 ggtttttctt gatcgaacgg aatggtattt ttgttacatg tgataccaac tgaatctaaa
     9481 gtctcttcag cttctttacc agtaagtcct atagaccctt ttacatcaac agctactaag
     9541 tgattatctg taccgccaga aacaattcta aatccttcat taattaatgc ttctgcaaga
     9601 acttttgcgt ttttaaccac ttgttgttga tacgttttga aattattttc taacgcttct
     9661 ccaaaagcaa ctgcttttgc tgcaataaca tgctcaagag gtccaccttg aataccaggg
     9721 aaaattgttt tatctatgtc ttttttatat tcttccttac ataaaatcat accaccacgt
     9781 ggtccgcgta atgttttgtg tgttgtagtt gttacaaaat cagcatattc tactggattt
     9841 ggatgtaaac ctgccgctac taatcctgca atatgtgcca tgtctaccat taacttagcg
     9901 tttacttcat ctgcgatttc tttaaacttt ttaaagtcaa ttgttcttga atatgctgat
     9961 gctcctgcca caataagctt aggcttatgc tctaacgcta atttacgaac ttcatcataa
    10021 ttgattcgtt ctgtgtcttt atctactcca tattcaacga aattgtagaa tttaccacta
    10081 aaattaacag gcgctccatg tgtcaagtga ccaccatgac tcaaattcat acctaaaact
    10141 gtgtcgccca tttctaatgc aactaagtaa acagccatgt tcgcttgtga acctgaatgt
    10201 ggttgaacat tgacatgttc agctccaaac aatgctttag cacgatcaat tgcgatgctt
    10261 tcagtaacat ctacaaactc acagccacca taatatcggc gtcctggata gccttcagca
    10321 tacttattag tcaacactga accttgtgct tccataaccg cttccgatac aaaattttcc
    10381 gatgcgatta actctatgtt gctattttgt ctctgaaatt ctctctcgat tgcttctgcg
    10441 ataactttat cttgcttggt gatataagac ataaaatctc cccttctttc aaaaaaactt
    10501 attggtattt agcacgttcg ccaccaatct ttttcggcct agatgtggca atagttacaa
    10561 ttgcctttcc tacttgcttt actgaggtcc ttacaggtac acatacatgt ttaatatgca
    10621 tgcctattaa tgtttgacca atatcaattc cacaaggaac agtaatatgt tcgaccacga
    10681 tcggatcctt catatgctga aaagcgtatg ttgccaaact ccctccagca tgtacatctg
    10741 gaacgacgga aacttcttcc attgttaatg gattaaactg agatttttct attgttatcg
    10801 ctctgttgat atgttcacat ccttgaaaag caaaagtaac gcctgtctct ttactcacaa
    10861 catctaatgc attaaaaata gtttctgcaa cttccatcga accgacagtc cctatttttt
    10921 cgccaatgac ttccgatgtt gaacatccaa ttaaacatat atctccttta ttaaaaaagg
    10981 acatatcttt taattcgtct aataacattg tcaaatcttt cataaaagcc cacccttcct
    11041 aaaaataaaa aaggaatata gcaaagtgct acactcctct attataactt atttaactgt
    11101 taacatatac taattataca gaattcctac tagcaaataa tatcttttaa ttttaaaatt
    11161 aaacttacaa gttcttcata ggtatgtaca tacatttctt ttgttccgcc gtatggatct
    11221 ataacttctc ctgcttcttt tacatattca tgcaatgtga aaacatgatt ttgcaaacca
    11281 aagtgtgcct ctattaattc tttgtgcgaa tacgacatgg tcaaaataat atctgctttc
    11341 aaatctgctt cagtaaattg ttgcgataag gtcgtttcag ctaaatgatg ttcttcaact
    11401 aagtcttcaa cataattcga aacaccttga ttgttcacag cgaatatacc tcttgattca
    11461 aattgatgat ttggcataac ctcttttgca atactttccg ctaatgggct acgacatgtg
    11521 ttacctgtac aaacgaatag aatcttcata gttcacaccc tttaataatg tgattacctg
    11581 cagcttttaa catgcgattc ataattgctt ctgtattatc attcagctca aagccgtata
    11641 tatacgcagc tgaaatattt tcattttcat caagtgaatg taacacatca taaagattat
    11701 gacttgcttg tttaacatca ttgtcatcct gacataattg aatgaattgc gcttcacttg
    11761 gtataaacgc caccttatta ctcggcacaa taaaagctat agaagaccaa tctttaccgt
    11821 catttccaat tttgctctca atatctgtaa taattgtaag tggtgtattg ggtgagtaat
    11881 gcttatactt catacctggt gcaattggct gttcagtatc attataatca gcatgggcga
    11941 tactattcgg aagtatttct gtaatcattg ctgctgttat agaaccaggt cttgcaattt
    12001 tataaggaaa agatgtgcaa tctaaaaccg tactttctaa tccttcttca ctttgttcag
    12061 cttgaacaat accatcgata cggccattca aatcttgata tacatgattg aaagttgttg
    12121 gtgaaggtct accacttaaa ttagcacttg gagcagctag aggttcattt atgatttgta
    12181 ataattgtct acctacagga tggcttggca ttctaacagc aactgatgat aaacctccag
    12241 aaacttttcg acatagatag cctggcttta acggcaatat aaacgaaata gagcccggcc
    12301 agaatgcctg cattaacttt tctacgcgtg gatccaaagt atatgtaaaa tcttttaatt
    12361 gaactttact gtgtatatga acaataagcg gattgtcaga tggacggcct ttagcttcat
    12421 atattttagc tacagcttct tcatctgtcg catttgctgc aagtccataa actgtttcag
    12481 ttggcaaacc tattaaacca ccgtttaaaa caatgtcttt tatttcattt attttaggat
    12541 attgctgtaa atcttcatta tattctctaa catcccaaat tttagtatcc aacttaatca
    12601 cgcctttctt atttatcata atacaaagta aaaagctatg cacttaacta atcatagcaa
    12661 aggcataact tttaattacc atttaaatga gacgattcga tcgtggccat ttatatcttt
    12721 aataatgtcg atttttttgt caggaaattt acttaaaatt attgatttaa gtgcctcacc
    12781 ttgattgtaa ccaatttcaa aaacaactgg gctgcctttt tccataacgt gaggtaaatc
    12841 ttcaatgatt gattcataaa tagcatatcc atggttatct gcaaacaatg cctgatgtgg
    12901 ttcgaatctc gtaaccgttg gagacatcgt aaccatatcc ttttcatcta tatatggtgg
    12961 attagatatc aagccgttca acttgatacc ttctttaatt aagggcttta atgcatcccc
    13021 tgttaaaaat tgtatttgtg attgatgctt ctcagcatta ttacgagcca tattcattgc
    13081 ttcaagtgaa atatcagtag caataacatt taaatccggc ttttcgcatt tcaaagtaat
    13141 tgcaagtaca ccactacccg ttccgatatc tacgattgtt gcatcatctt ctaactgttg
    13201 taagaaatgc aacattactt cttcagtttc aggtcttggt atcaaacaat ttgagtttac
    13261 atcaaacgtt ctaccataaa atgaggcaaa gccaactata tactgtatag gctctcctaa
    13321 taacatacgt tgtaatgcta agtcgaactt cataatcatc gctttcggca tatcatcatg
    13381 catgtggact acaaagtctg tacgcgtcca ttgaaataca tctaacatta accattcagc
    13441 tcgtgtttgt tcaaaccctt tttgttgtgt taaatgaatt gcttcatcta acttttcttt
    13501 ataattcacc attattaagt tctttcaatt tatctgtctg ctctgataaa gtcagtgcat
    13561 ctataatttc ttctaaatgg ccttccataa tttgccctaa tttttgaagc gttagaccta
    13621 tacggtggtc tgttacacgg ctttgtggat aattataagt tcgaatacgt tctgaacgat
    13681 caccagtacc gactgctgat ttacgttgtg acgcatactt ttgttgttct tcttgaactt
    13741 tcatatcgta taaacgtgct tttaacactt tcattgcttt ttcacggttt tgaatttgag
    13801 acttctcaga agatgttgca atgacaccag ttggtaaatg ggtaatacgt actgcagagt
    13861 cagttgtgtt tacgtgctga ccacctgcac cacttgaacg atacgtgtcg atttttaaat
    13921 cttcatttct aatttcaatt tctacatctt caacttctgg taaaactgcc actgtagctg
    13981 ttgaagtatg aatacgtcca cctgattctg tttcaggcac acgttgaacg cggtgcgcac
    14041 cattttcaaa tttcaattta ctatacgcac cattaccaga aactgagaaa ctaatttctt
    14101 tgtaaccacc atggtcactt tcagacgctt ctactatttc agttttgaat ccttgtgatt
    14161 cagcatactt tgaatacata cgcattaaat caccagcaaa aatcgcagcc tcatcaccac
    14221 cagctgctgc tctgatttct acaataacgt ctttgtcatc attaggatct ttaggaatca
    14281 ataatatttt aagctcttct tcaagatttg gaagttcagc tttaataccg ctactttcct
    14341 cttttaacat ttctacttct tctttatcat cagtttcact taacatttct tcaatatcag
    14401 ctaattcttc ttttttagct ttatagttac gataaacatc tacagttttt tgtaaatcag
    14461 cttgctcttt agaatattta cgtaatttat ctgaatcatt tacaacatct gggtcactta
    14521 acagttcatt taactgttcg tatctttctt ctacaatatc taattgatca aacacttata
    14581 attcctcctt attattatca ctaggtgcta cgatatggtg cgcacgacaa cgtggctcat
    14641 aactttcatt ggcacccact aagataatcg gatcatcgat tttagctggt ttaccattta
    14701 ttaatcgttg cgttctacta gatgaagaac cacaaacagc acaaactgct tgaagtttcg
    14761 ttacttgttc actgacagcc atcaatttag gcattggttc gaacggttcg cccctaaaat
    14821 ccatatctaa tccagcaaca ataacacggt gtccatctgc tgatagtttt tctactatac
    14881 ttacaatttc atcgtcaaaa aattgcactt cgtctattcc tataacatca acattagtta
    14941 agtcgtgcgt cataatttca cttgctttag aaatattaat cgcttcaatg gcattaccat
    15001 tatgagagac cactttttct ttatgatatc gatcatcaat cgccggttta aatacaacga
    15061 ctttttgttt agcgtatatg ccccttctta aacgtcttat aagttcttcg gatttaccgc
    15121 taaacatact acctgtaata cattctatcc aaccggaatg gtaagtttca tacattgaga
    15181 gttccacctt tttcaaaaca taatcgcttt attatatcat atttcaaata ttcataaatg
    15241 tctttttcat aattatatcg atattgtaca tgaacaatta ttttataaat ttgtcttgca
    15301 tatttatata cagctattct aatttgttgc ttcttattcg tgcgatgttt ctactcaata
    15361 caaactttaa taaaggggaa atttatcatt atgtattaac aacatggtat tgactcactt
    15421 ctttgaacac agtcgtaagt aaacaccctt actacactta taaataaaaa agctgtctac
    15481 aattccatta taggaagcag acagcttaac gattactata ttagttgttt gatttaagac
    15541 caaacttttt gttgaaacgt tccacacgtc catccgcagc agcgaatttt tgacgtccag
    15601 tgtagaatgg atgtgaatca gatgaaatat ctaaacgaat aactgggtat tcttttccat
    15661 cttcccactc catcatttct gaagatgttt ttgtagaacc gcttaagaat ttgaagtttg
    15721 tagtagtatc taaaaagatt acttggtgat actcaggatg aattccttgt ttcattattt
    15781 tcagctcctt tgccctgaac catctggaac agagttattt gtgagttttt acccaatact
    15841 gtgtaattat aaaggtaatt aattcaaaac gcaagcccct atataatgtt tattaaatta
    15901 taggtcgacc cgttttagta ctttcttctg cagacttttg tagctgcttg aagaaatctt
    15961 cattattctt agacttttta agtttgcgaa taaatctttc agtaaagtct gttgagtcag
    16021 tgaatagatt tcttaattgc cataatgtgt ctaattcaga tttacttatc aacaattctt
    16081 ctttacgcgt tgaacttctg ccaatatcaa ttgcagggaa gatacgacgt tcagacaatt
    16141 tacgatctaa atgtaactcc atgttacctg ttcctttaaa ttcttcgtaa atcatatcgt
    16201 ccatacgtga acccgtatca actaatgcag ttgcaagtat tgttaaactt ccacctgctt
    16261 caatatttct cgctgcaccg aagaatgctt ttggtttgtg taaagatgca ggatctaaac
    16321 cacctgataa tgtacgacca cttggtggaa taactaagtt ataagcgcgt gctaatctcg
    16381 ttatagaatc cattaaaata atgacatctt ccccaatttc tactaaacgc tttgcacgtt
    16441 caagtaataa ttcagctact ttaacatggt gttctggtgg ttcgtcaaac gttgaatgaa
    16501 cgacttcagc agcttctact gagcgttcta aatctgttac ctcttcagga cgctcgccaa
    16561 ctaacaaaat aaacagcttt gcatctggtt tgttcgtact gattgcattc gctatctctt
    16621 ttaataacga tgttttacct gctttaggtg gcgccactat taagccacgt tgacctaaac
    16681 caatcggtgt aactaaatcc atgatgcgcg ttgaataatt tcgtgtttct gtctctaatt
    16741 taatacgctc atctggataa agtggtgtca aagcttggaa atgcggacgt ttcttcactt
    16801 cttctgcgtt atggtcatta acaaagtcaa cttgtaataa gccataatat ttttcgttat
    16861 ctttaggttt tctaactttc ccagttactt tatccccacg tttaatttca aaacgacgaa
    16921 tttggctagc agatatataa atatcttttt cccctttaga atagttcact gttcttaaaa
    16981 aaccataacc atctggttgt atatcatcta agataccttc catataatag ttaccatctt
    17041 tttccatttg tgcttccata atagctagaa caagttcttt tttatttaat ttactatagt
    17101 tcgtcaactt aagagtttta gctttttgag tgagttcctt ggtagtatag ttcttgtaca
    17161 attcgtggaa tgattcatac tgaggagatg tacgttctct ttcaggcata tagtttacac
    17221 ccatttcatt attttttagt tagtaagtaa tagataggca tgacaatgca taaataactg
    17281 tgctagcaca atcccattat gctaatcccc aaccttttaa atacatgaat aactatagca
    17341 aatttttatt ttaattacaa aatctattta taaaaattgc aaaattaaaa cagtacacaa
    17401 aacttaatta gtcatgtgca ctgttttatt gcgattttta attcaaaaat caaatttatt
    17461 taaaatagcc agctatagat ttcacttcta agaactcttc aataccataa tcgccccatt
    17521 cacgacctaa accagattgt ttatagccac caaatggtaa gtctggcttt ctacctgctt
    17581 cgtttatttc tactgtacct gcttcaatag aacgagctac tttatgcaat gtttctttgt
    17641 ccttaccaat aacatatcct gccaaaccat attttgtatc atttgcaatt tgaatcgctt
    17701 catctaaatc gttataagtg ataaccgaca ttactggccc aaaaatttct tcttgtgcta
    17761 tcgtcatttg attatctaca ttaataaaaa ttgtcggacg tgcaaagtat cctttttcaa
    17821 gtccttctgg tttaccagga ccaccataaa ataattcagc accttcttca atacctttat
    17881 taatataatt ttgtacttga tcaaattgtt ttttactaat gatagggcct acttgtgtac
    17941 catcttctct tggattaccg acacgcactt ggctaaattg ttcttttaat tcagctaaga
    18001 atgcatcttt aattttgtta ggcactaaaa cacgtgtacc agctgtacat acttgaccag
    18061 tattattaac aactttgcct gttgttgctt tagccgcttc tttaatatct acgtcatcta
    18121 ggacgatgta tggtgatttg ccaccaagct ctaatgatac ctttttaaag tctttagcag
    18181 ctttttccat aattttagaa ccagtagggc ctgatcctgt aaatgacatc atgcgtactt
    18241 taggatgttc agataaagga ttcccaactc cagcaccatc accattaaca aggttaaata
    18301 cacctttagg aacaccgact ttatcaaaaa tctcagctaa aataacagct gcaaatggtg
    18361 tttcttctga tggtttaagt acaactggac taccagccgc aaatgctgcc gctaatttta
    18421 atgatgtttg gtttgtaggg aagttccacg gtgtaattaa gccagataca ccgattgctt
    18481 ctttaacaac taaatcatct ccgcggcgtt cttcaaattc gtagttatct aatgcgtctc
    18541 tcgctgcaac aaaatggttt agtcccattt gataatggac acgctcagat aatgataaag
    18601 gagcacctaa ctcatccgta atagcttgta caatatcgtc ttttctgttt tcatattctt
    18661 ttacaatttt atctaataat gcttgtcttt ctttcacaga tgtatgacgg aactctaaat
    18721 aaacattatc tgccgcctcg acggctttat caacatcagc tttattacct ttagcaactt
    18781 tcccaattac ttcttcagtt gctggattta taacttctat cgtttcatta ctattacttt
    18841 ttacccattc gccattaatg tattgctttg tgtagtctct cattattctt tcactcctca
    18901 agaatgattt atatattatt tatccgtaat gcatacgata taaacattac attccattat
    18961 gatacgctcc cttttaatat gttcaaaata aaatgcttta aaattttgct gcatctaatt
    19021 tttttatatt tttaaataaa aataactatt cccacatcat cgcaaataat gcgaagactt
    19081 agaaatagtt ataatcaatg ctatgtttaa acgtcatgta attatttagc agtacgttga
    19141 tctgttaaat cgacatatga ttgcgcccat gcttcaattg gatgtaaagc ctctgctaac
    19201 gctttacctt tttcagttag tacataaata atttgtactg gactcgtaga aatgatttgc
    19261 ttctcaacta actcccattg tgcaagctct gacaacttaa gacttaaagc acgtggcgtt
    19321 attgttttca aatctctttt catatcggaa aagtgtgctg aacagtcatt acatcttgag
    19381 agataattaa tgattaatcc attccaactt ctaccaagta ttttaaaagt ttcttcgaga
    19441 tacggacata cttccatcat cttcacctct catcaataaa tttagaatgt aaacgaacac
    19501 ccttttttaa tcagtataat tattatacca caaaacaaga taaatctata cagtttccgt
    19561 ccaaatatct gcacctaaag tttttaaatg ttctacaata tctgtataac ctctataaat
    19621 atgtttaaca ttgtaaattg tagttacacc ctcagcaatt aaaccagcaa taattaaaca
    19681 agctcctgct cttaaatcgc tagcataaac ttcagcacca tgtaatgttg atggttttat
    19741 cgttgctgtg ccttcgtcaa cttcaatatt tgcacccatg cgctttaatt cttcaacatg
    19801 tttaaaacgc tccggataaa tcgtatcagt tacaaatgaa ggaccatttg ccataaataa
    19861 taatggtgta ataggctgtt gcaaatcagt agcaaaacct ggatatacta gtgttttaat
    19921 atcaacaaat tgatatggtg cattattatt gatgcgaatt ctttcgtctc ttacatcaac
    19981 attcacacct aattcactaa atttagcagt taatgtttct acatgtttcg gaacaatatt
    20041 atttaatata acattttctc cacatgctgc agcgatacac atatatgtgc ctgcttcaat
    20101 tctatcaggt ataacttgat actcagaacc atgtaattct ttgacaccat tgattttaat
    20161 tgttgatgta cccgctccct taatattagc tcccatactt gttaagaagt tagcaacatc
    20221 aactacttcc ggttctttag cagcattttc aattacagtt tgtcctgttg cataaactgc
    20281 agctagcata atgttaattg ttgcacctac gctaaccata tctagaaaaa tatgtgtacc
    20341 ttttaactct ttagcttcaa ttttcattga tgtcgtactt gattcatcaa tttcagcacc
    20401 taaagcttta aatcctttaa tatgttgatc aattggacgt ggcccaagtg gacatcctcc
    20461 cggtaaacca atcacacatt ttttaaatct acctaacatg gcacccatca tatagtatga
    20521 agcacgtaat gattcaactt tattatttgg taatgcagca ttttgtattt cagttgtatc
    20581 aacttctaat tccgtaccat ttagtgaagc cttaatattt aaatcttcta ataaactcac
    20641 taaagtttta acatcagaga tttgcggtaa cccttctaat ttcacatgtc cttgagctaa
    20701 taatgttgca ggaatgatag ctacagcact gtttttcgcg ccactgatat taacttcccc
    20761 atttagtgtg cgtccacctc ttatttttat tacctcttga gccatatcat ttatctcctt
    20821 tgtccattac tttttaattt tttgcattat tagcattata aattaatttt actttatttg
    20881 taaaatagtt tattttaatc gttaaaatct tgtctttcta ttttcgatcg attaataaca
    20941 aatcattcac ctttactaat atatgctgtt cttccccact tgaccatggt ctaaagtctg
    21001 attattcaac taaatattga cgttgttttg acaattattt agttttaatt ctacgatttg
    21061 cacgtaaact tttttcataa attgctcatt ttccttataa ttatatcaca atcaattttg
    21121 gtatatttta ccatttttac gctttcactt taaaatcaaa ctgttttatt tattacttat
    21181 acaacataaa aaagaagcaa acaccatttt gtctgcttct tttaaaatta atatccctac
    21241 gttattaata acttaaagac taaatattaa ttatttagcg cggtttgaag taccgaactc
    21301 tttaatttta cctttaactg tttctttgat agcttcacga gcaggtccta agtatttacg
    21361 aggatcgtaa acttctttgt cgttatttaa aacgtcacga actgcttttg ctgaagcgat
    21421 ttggttttca gtgtttacgt taattttagc tgtaccaaat ggaattgctt tttggatatc
    21481 tttagttggg ataccagtac caccgtgcaa tactaatggt aaaccagtag ataaaccgat
    21541 ttcttccatt tctttaaatc ctaattttgg ttcacctttg tatggaccat gaactgaacc
    21601 taatgctggc gctaatgcat cgataccagt tttttcaact agttcttgac attctttagg
    21661 atcagcataa atgatgccat ctgctacaac atcatcttct tgtccgccaa cagtacctaa
    21721 ttcagcttct acagaaacac ctttttcatg agcgtattca acaacttttt tagttgttgc
    21781 aacgttttct tcgaatgggc tgtgtgatgc atcgatcatt actgatgtga aaccagcatc
    21841 gatagcttct ttacattttt caaagcttga accatggtct aaatggattg ctacaggaat
    21901 agtgatgttt aagtcatgca ttaacccttc aaccatttta acaattgtgt agaaaccgct
    21961 catgtaacga gcagcacctt cagaaacacc taaaattaca ggtgcatttt cttcttgtga
    22021 cgcttctaaa attgcttgag tgaattctag gttattaata ttgtattgac ctaccgcata
    22081 accattttct tttgcatcaa ttaacatttc tttcattgaa actaaaggca tgaaagttcc
    22141 tccttgagtg cttacgcacg tatttttcaa agtaattata tcaaaaaaat agcgtcaatg
    22201 cattgaaata ctgcagatta aatgtgtatt ttttgaaaaa tgcgatagtt atactaaatg
    22261 caaacgtata catttttata caatttaagt cgttgcataa tatgtagtca ttaattacaa
    22321 tattttataa gtagattgga ggataaagat gtcaaaaatc ttaaacacac aactgatagg
    22381 tatctttaat agattagaaa aacaatcttt agaaattcaa atggccgcgc aatgtttaat
    22441 tcaagcaatt ggtggcgaag gttatgttta tgtaaaaggt tacgatgatt tacagttttt
    22501 cgaaagtttc attctacata gtgatgagcg tttaaaatct agccgaaagc ttgacgctat
    22561 taaagacttt aacgaaattg actcaactga tcgtgtatta ttattcgcac cattttataa
    22621 tgagcaagtt gcattagata ttcaaaaact catcgactta gatatcgatg tagtcttaat
    22681 aagcaacaaa cctaaaacag atgatttccc tgatcatctc gtgcatttta tcgatttatc
    22741 tacaccaaga cctatagtct atactgaaga ttacgataag attgtccagc cacatgcgat
    22801 ggcattgaat tatgtatact atgacattta tacacaaatg attgaaatga caagagactt
    22861 agaattataa aagtcacaat tgttatttaa taccttgtca ctaacataat attaaaatta
    22921 tgcgaaaaac cggtactttc aatgtttaac aatgaaagta ccggttttat tagcaaattt
    22981 atttattttg ttgatatttt aatgaagctt caataaatga tttaaaaatc gggtgcggac
    23041 gatttggtct agataagaat tctgggtgga attgacaagc aataaagaaa tcatttgtcg
    23101 gaatctctag catttccact aaacgtccat ctggacttgt accagaaatc accataccat
    23161 tcgcttctaa ttgttctcta tagtcattat taaattcata acgatgacga tgtctttctt
    23221 caatttccgc tttaccataa acatcttgtg ccaatgtgcc ttctttaatt gaacatggat
    23281 ataagcctaa gcgtaatgta ccacctaaat cttcgatatc tttttgttct ggtaataaat
    23341 ctataattgg gtatgatgtt gcagggtcta attcagctga atgtgcgcct tcaaggccta
    23401 atacgtttct tgaaaattca actgttgcaa gttgcattcc taaacaaata ccaaagaatg
    23461 gtacattgtt ttctctagca tacttaattg cactaatttt accttcactt gcacggaaac
    23521 caaatccacc tggtactaaa ataccgtcga catctgcaag gtattcggcc gcattttcat
    23581 ctgtaacttc acttgaatca atccatctaa tatcaatatc tttagcgaaa ggatatccgg
    23641 catgttttaa tgattcaact acagataagt atgcatcttg taagctaaca tacttaccaa
    23701 ctaaaccaat tgtaatttta ccatctaaat tattaacgat atctaacaac tgtttccatt
    23761 catcaagctg tgtttcatat ttcgcgttta attgtaaacg tttaataacg atatcatcca
    23821 tattttgttg gcttaattgt aacggaattt cgtataaaga gtctgcatca cgacattcaa
    23881 taacactttc tttattaatg tcacagaata atgcaatttt atcttttaaa tcttgtgtca
    23941 tttcatattc agttcttaca acgattaagt ctggttgaat acctaagcct cgtaattctt
    24001 taacactatg ttgcgttggc ttcgttttca tttctccagc agctttaata taaggtaata
    24061 gtgtacagtg aacatacata acgttttctc tacctaaatc actgcgaatt tggcgaatcg
    24121 cttcaataaa cggtaatgac tcaatatcac ctgttgtacc gccaatttca gtgataacaa
    24181 cgtctgcatt cgtactttcc cctgcaagta ataaacgttc tttaatttca tttgtaatat
    24241 gcggaataac ttgaactgtt ccgcctaagt aatcaccacg acgttctttt ttcaatacgt
    24301 gtgaatacac tttaccggct gttacatttg aaaacttgtt taaattaata tcaataaatc
    24361 tttcgtaatg tcctaagtct aggtcagttt ctgcaccatc atccgttacg aatacttcac
    24421 catgttgata aggactcatt gtacctgggt caacatttaa gtatggatcg aatttttgaa
    24481 ttgttacatt tagacctcta tcttttaata atctacctag agaagatgct gtaataccct
    24541 tccctaatga tgaaactacg ccacctgtta caaaaataaa ttttgtcatg tcttgacctc
    24601 ctaattatta aagggaatgc ttcctcatca attgtaaaaa ttacgtaaaa cataacattt
    24661 gagtaagctc attcaagttg tttatttgtc gaattcgaca aaattaaatt ctgtttgctt
    24721 accgtttcca tactgctatg tcactatgta tatcatttac aactttgatt attgcgttat
    24781 catttcttga tttactcaat taaataaaaa aacgctccct ctcacaaatt ttgtaagggg
    24841 agcgtataaa ttttatacac gtgtcctatt taaaggagcc cgaataaaat tttatcatct
    24901 ttcaactaaa agtcaaacaa aaaattatgc tttgaagtct tcttcgtctt caaaatcttc
    24961 ttcgtcttca tctagttcat cttcatcttc ttcaatgact atatccgaat gattgatttc
    25021 ttcttcaact tgctcatctt caggatcatt taattcttct tgatcatcag tttgagctgg
    25081 aatatcgtca tcatcatcca tttcatcttc acccaataat tttaagtttt gatcttcttc
    25141 atcatcggcg tctaaaatat caaatttttg aattgttggt gcaattttct cttcgatatc
    25201 atctactgag taccagtcac gtaatcccca taagttttca ccaacattta aaaaacgtcc
    25261 atctgtattt aaatctgtgt aaaattgtac aacacgagtt tcaatttcct catactcata
    25321 atcacctaat gctctaaatt catcgatgat atcatataag ttcattgttt cacctttatc
    25381 attcaataat gtataagcca tatcaataaa tgatttttca tcaaccattt gttttgtata
    25441 atcttgaatt ttcattgccc aatacttcct ttcgaaggat ataatctaaa tttatacgtc
    25501 tgaattcatt tatatatagt aacaaaacta aattataaat gacaatatca tatttcgcaa
    25561 tcactgttag taatttaaat atttttcgaa aacgacataa tcatcagttt gttcgatttc
    25621 aacgaaatta ctatttagac ataatggttt aaaatcatta ttctctccaa acagaatcat
    25681 cgtaatcaca ttaaggttgt catagttttt tcttaagtaa gtaggcaatt gtcgaagtgc
    25741 acttgaacca ataccattaa agcgatatga tttatccact tcaatagcag caatgttcat
    25801 gcgttcacca atctgctcca atgcgataaa gccaaccttt tggccatcaa tcattaaatt
    25861 aatgatatgt acattggtca cttctgaacg actttcttct tcaagcttta atgacgaaac
    25921 atgttttgaa tctaagtcca agtaatataa tcgttctttg ccaattggcc cttcttcttt
    25981 agtcgctgta tgcatgaatc cagcacgttc gtataggttc caagcattgt cattttccgc
    26041 atctactact agatatagat gattaaaatc aggaaataca ccttgaacat attgcggcaa
    26101 tgacatcatt attttcgtgc catatccaaa accttgatat ttttcattaa tcgataatga
    26161 acgaatataa acgacatttt caggtgtatc ataaccttca tgctgatagt aacgatgtaa
    26221 tacaaaaaag cccaccactt catttttgtc gtttattgct acgttagcaa tcctatcagc
    26281 atcattaatt gcatcatcaa taacttcttt aggtaaagat gaatatattt gttgtctttc
    26341 attcaagtca aaatcattaa ttgctgaacg atattgttca tcaaatgctt ttaaagtgat
    26401 accttcaaaa caaagttctt tagccatata tttaacccct atctttttat atatgaagca
    26461 tgaatcccca tattatttta cctattattt cactacgata ccattattta ctctaagtta
    26521 aataaattac ttatttatat ttttttaaat ttcaaaatta atgtgctatt cctcattact
    26581 tatcatttta atcagaaact tacaaataca ctgcgtacga actactttta atattacgtc
    26641 actaattaaa aatcctatac aacttcaaaa ttcctagaaa ataatatata taacttaacg
    26701 tccacgtttg taatacatta attgcgatac gcttacaatg ttgaaataca atggcatcaa
    26761 atttgttaat aattactatt attacttgtt ttttagtcat tttactatac tattatttaa
    26821 ggatagacat taataatgag gtgggaatct tatgaaagtt ggcattgacg ctggcggtac
    26881 actaattaaa atcgttcaag agcaagataa ccaacgtact tttaaaactg aattaactaa
    26941 aaatattgat caagttgtgg aatggttaaa ccaacagcaa attgaaaaat tatgcttaac
    27001 tggaggtaat gcaggtgtta ttgctgaaaa catcaacatt cctgcacaaa tttttgtaga
    27061 gtttgatgct gcatctcaag gactaggtat tttgttaaaa gagcaaggcc atgacttagc
    27121 agattatatt tttgcaaatg ttggtaccgg tacgtcacta cattatttcg acggccaatc
    27181 acaacgtcgt gtaggcggta ttggtacagg tggtggcatg attcaaggac tcggttattt
    27241 actaagtcaa atcactgatt ataaacagtt aactgacatg gcacaacacg gagatcgtaa
    27301 cactatcgat ttaaaggtta gacatattta taaagatacc gaaccaccca ttcccggtga
    27361 tttaacagca gctaattttg gtcatgtact acatcattta gatgctgatt ttacacctag
    27421 caataaatta gcagccgtta ttggtgtcgt tggcgaagtt gttacgacaa tggccattac
    27481 tgttgcacgt gaatttaaaa ctgaaaatat cgtttatatc ggttcttcat ttcataataa
    27541 tgctttatta cgcaaagttg tggaagatta tactgtgtta cgcggttgca aaccgtacta
    27601 tgttgaaaac ggcgcatttt caggtgctat tggtgcatta tatttaggaa aatagaaaaa
    27661 gaccatttat atgagcgttg ttttaaataa gcgctatata aatggccttt tattttatgg
    27721 tctacgtgtt ttgaatacgt attgttccat ttattatcac ttaattactt acaactcaat
    27781 tcaattaaaa tgtaagttca ttagacaatt tttgcgctga aacaattgta ccaaccacgc
    27841 cagtttttaa atctatcgca acggctttat gatcatctct aagttcatct agccattctc
    27901 cgaaaacaga accttcaatc gtaattaaat cacactcttc aaaatcttca tctcgaactt
    27961 ttaacgctct gtttttaata ctccatacag gcataatatg cggctttttt tcgtcgctat
    28021 cattttcact aatgagaata aactgcttac tacctttttt agttaagccg tatacttcat
    28081 catatttcgc tacatcttgg acaaattctt tgattctaat tttatctaat tccgtcatca
    28141 cttcttgtgt aacagctaca acgtttagaa gatgcccttc ttcttccatt gtttgattca
    28201 taataatatg gtcttgttca tcaaacaatt catctaattc ataagtagca aaacgatcaa
    28261 cgtccatttt tacaacttta tcaaatggaa tatcacgact tgttaaaaat gatacggcca
    28321 cactttcttc tgtccaaacg cctacatacg cttcactttt ataatttagg cgtactagtt
    28381 ttttattttt agaggcgaaa taaatacatt catttattaa tatatctcta aagaatagat
    28441 atgctttata agacatgctt gaccctcact ttttaaaata tgtcatacat aaaatagtaa
    28501 atgactccaa caagatagtc aattagacat attatgaatt caatttaatg tcatgttttt
    28561 cattttaaaa attcaatagc attaaatttt acgtatacac aaattcggtc tataacacga
    28621 aacatatcta gttactaaaa atttcaaaac gataaccttt aatatacctt tatcaacaaa
    28681 atggcaactc ttataacata gtgaaataac agtcgccatt taatattagt attacaaagt
    28741 attgccatat cataaattta attactgttg actagaatcg aaaaaacttg ttacaagcgc
    28801 atattcagtc aactactggc aacataacat cgtagcgcct tatgttccga actctaatag
    28861 tgttcaagtt cagctaaaaa tgcgcgttca ttctccagta ctgtttcttt tgaatctcca
    28921 tgccaaatac agccaaacct tgatttaact ttatcttcac cgtaccaatc accatcataa
    28981 taagataacg ggtataaact accttctttg acatatttca aaatcgtatt gaagaaatgt
    29041 gtgttatcac cttttgaatg ataactataa aacttttgat atcctgaatt caattcatta
    29101 gcaagtaata acatgctagt tgaaccattt tgtctaaagt ttaaatcaat cgcataaacg
    29161 ttatcatcct catcgacaag taagtcaaaa ccagccacac caaagaatcc ttgattcaca
    29221 ccgttttcca taatttgtct acctgcttct ataacgtgct ctggtacatt agtagtattt
    29281 tcatttccgt tataaaatcc gtacttatcc gttaattgcg ttgccgcacc aagatattga
    29341 atacctagcg attccgagta tgcaaactga acgcaataat tcgctttttc ttcaatcttc
    29401 tgttcgataa taagcgaatt cgtttcagca gttgcctctt taatacgcgt tatcgctttt
    29461 tgtaaatctg catcatgata acaaatcata acaccatagc cacctgctgt cggaagatca
    29521 tctcccggct taattacaaa cgggaattcc caattcttaa tctcgttttc gaattgctca
    29581 atttttacaa cttttctttt tggtaaaaac ttcccatttg tccattcagg tattcttgct
    29641 ttattattta aagcaacaaa taacgtttta tctaatgcat aatattgctg attcaagatt
    29701 gtttcatcat gaatatattg aaaataaatc tttttatttt ccttatgtgc caattgtttg
    29761 atcaagtttt cgtaagattg ctgattgtta aatgtataag ttgagttcgg tacatcctta
    29821 ccaataactt gaaataactt atgcaatttg tctgtcgcac tagcttcgtg aacaataaca
    29881 ggtaattgat ttgctattaa taactcccta ccagttaaaa aattagattg atgttcgtcc
    29941 ggtttcaacc atggattcga tatatacgaa ggtcttgacg tatagacaac atctttgtca
    30001 tataaatcac ttaacgttaa gttcggctca ttaccattat ttgtcattac ttcccattcc
    30061 ctttcaaatg cgcatgctct tcaataatgt cttgataaac gtcttgattt gtaattaact
    30121 ctaaccccat caacgccatt attttagcac ctttaattaa tgcttcatca ccatgtacac
    30181 tcgcagctgc ttctctaaat ctatgtgtat gccctactaa attacgtgat ccaattttaa
    30241 tatgaggatg tattgttggc acaacatgac ttacgttccc tgtatccgta gagccataac
    30301 caaaatcatc atcaataact gcttcaccaa cttcttcagc atatttagca aataaatcat
    30361 ctaatttcgg cgttttaatg aattcattca caccgttttg aattggacca aattcataat
    30421 cacaaccagt ctgtatcgca gctccacgtg cgatttgatt tactttttct gttaatatat
    30481 ccaattcttt acgcgtcatt gctctagtat aaaaacgagc atgtgtatag tctggaataa
    30541 tattagctgc tttcccgcca tctaaaatca caccatgcac acgttgacct tttttaatat
    30601 gttgtcgtag ttgtgctaca ccattaaaat aactaatcat agcgtctaat gcatttaacg
    30661 cttcatctgc attttcagag gcatgagcac tttttccgta aaatttaaca tctaaaacat
    30721 ccactgccaa agtatcaatc gttttataag tttcatttcc cggatgaatc attaaggcaa
    30781 tgtctatttg atcaatcaca ccagccttga cataagaagc tttagcgcta ccattttccc
    30841 caccttcttc agctggacat ccgagaacga ctactttacc cccaatttgg tcaatcactt
    30901 gcttcaaacc aattgcacca agcacacttg cagttccaat gatattatga ccacaagcat
    30961 gacccaatcc tggcaatgca tcgtattctg ctaaaaaacc tatagctggc ccgtcaagac
    31021 ccgaatcata tgtcgctata aacccagttg catgcccagc aatctcggtt tcaatttcaa
    31081 aatcatgttc tttcaaacga tctattaaag ttcgagacgc aaatatttct tcattaccaa
    31141 gttcaggacg ttcatgaatt ctatgactaa tttcgatata actatattta tttgtttcta
    31201 tataatcgag aatttgttgt ttttcactca ttttttacta tctccctttt accctacact
    31261 cattttaatc atccacaata ttttgttctt tcaaaatgaa ttattactta ttctatcggt
    31321 tttatctcat gatgtcatct agtttttctt tatttacaaa attttctaat aactaaaagc
    31381 ctttcataaa tttataaaac agtttcaaat tgtaaaacat aagccctatt gttacaattt
    31441 aagtattgtt agaaacgcaa cttgcaacaa atttaagttt aataatgtaa tgaatcattc
    31501 gcgttttata gttttgagta gttaatagga ggaaatttaa aatgacaaaa atgaatgttg
    31561 aaagtttcaa tttagatcat actaaagtgg ttgccccatt tattagatta gcgggaacga
    31621 tggaaggatt aaacggagat gtcattcaca aatatgacat tcgtttcaaa caaccaaaca
    31681 aagaacatat ggatatgcct ggattgcatt cattagaaca tttaatggct gaaaatatta
    31741 gaaatcatag tgacaaagtc gttgatttaa gtcctatggg ttgccaaact ggtttctatg
    31801 tatcatttat taatcatgat aattatgatg atgtattaaa tattgttgaa gcaactttaa
    31861 atgatgtgct aaatgctact gaagtgcctg cttgtaatga agtacaatgt ggctgggcag
    31921 caagtcattc attagaaggt gctaaaacta tcgctcaagc atttctagac aaacgaaacg
    31981 aatggcatga tgttttcggt acaggaaaat aaatcttagt caatcaagtt aatcagaaaa
    32041 gcagtcgaac aatgatgtta caatcgccat tgtccaactg ctttttatta tgcttcaaaa
    32101 tcaaaaaatc gaacaaatga aaaagtaaaa tctttaacat ttgtccgatt tatttaagaa
    32161 ccactataat ttcttaatta gtcccattaa cacgaactgc ataggtaacc ttaaatatag
    32221 ttgccatgtt ggcaattgtt tatctcctaa aggtaacttt ttaactgcca tatagatatt
    32281 agctgggaat acagctaaca agaatagatt gattgtattt ttcaagcatt gtgatggtct
    32341 tttaattaaa agcgcaagtc caaataatat ctcaaagatt cctgtaacaa gaaccgctgt
    32401 ttttcgaagc ggcaaacatt tcggtatgat atttctaaat tgtcgttctc gtgtaaaatg
    32461 caatacacct attacactaa aacctattcc taataaatat cttagtatgt tcaatcagct
    32521 tcaactccta ctctgtaatg attttatgaa ttaatgtagg cgatacaaca tgatcagcaa
    32581 ttgttatgct tgaatctaat ttttcaacaa catcgtctac atcttggcga ttactgtgaa
    32641 tcgttaataa tgattctcct tcttctactt tatccccaat ttttttattt aaaacaatac
    32701 caatcgctaa atcaatatca tcctcttttg ttaaacgtcc cgctcctaac atcatcgaag
    32761 cgacacctat atcgttagag actaactcag tcacataacc tgatttttta gctttatatt
    32821 cgatttgata ttgagcttgt ggcaaacgct ctggatggtc aataactgtt tcgtcgccac
    32881 cttggttttt aataaatgtt ttgaattttt ctaatgctgc acctgaatca attgcctcaa
    32941 ttagcaatgc tctcgcttct tcaagcgttt cagctttgtt tgcaagtaca accatttgag
    33001 aacctaatgt taatacaagt tctgttaaat ctttcggacc ttgtcctttc aacgtatcta
    33061 ttgcttcttg taactcaagc gcattgccaa tcgcacgacc aagtggctga ttcatatcag
    33121 aaataatcgc catcgtatta cgtcccacat tattaccaat acgtaccatt gcgtgcgcta
    33181 atgcttcagc atcttctaat gttttcataa atgcaccgct accagttttt acatctaata
    33241 caattgcatc tgcaccagca gcaatctttt tactcataat tgaagaggca attaatggta
    33301 ttgaattgac agtaccagta acatccctta aggcatataa ttttttatct gcaggagtta
    33361 aatttcctga ttgtcctaca actgccactt tattttcatt aaccaatttc acaaatgttg
    33421 cttcatctat ttcaacatga aaaccatcaa ttgcttctaa tttatcaatc gtaccacctg
    33481 tatgacctaa tccacgccca ctcatttttg caacaggaac atctacagct gctactaatg
    33541 gtgctaaaac caatgtagtt gtatctccta caccacctgt tgagtgctta tctactttga
    33601 cacctttaat atcactcaaa tctatcatat caccagaatt aaccatagcc atcgttaatg
    33661 ctgcacgctc atcatcattc atatcttgga aataaatcgc cattgctaaa cttgatgctt
    33721 ggtaatcagg aatatcccct ttaacatagc cgtcaataaa gaaattaatt tcttccgttg
    33781 ttagtgtatg accgtcacgc tttttctcaa taatgtctat cattctcatt tttatcatcc
    33841 ttttcttaaa aagcttagga caaagcattt gcgctttctc tagtccattt ttaaaagcac
    33901 aagcgaaaat tattatagca agctatcgat ttcattttta atatcacaat ttcaatgcga
    33961 tgttattatt cttaaataga ttggttataa cgtcaaagtc cctattaaat tatcctagaa
    34021 tcatcatggc atttatgatg tcttaaagct gatatcgaca tacttatata tgattacgat
    34081 gtcccatgct tacatgtttt ttataaaatt agtaatctga atctgcttct aaaccttgca
    34141 taatttgaac gcctgcgctc gcaccaatac gtgtcgcacc tgcttcaacc attttattga
    34201 aatcttctaa attacgtacg ccacctgatg cttttacttc tacatcagca cctactgtat
    34261 ctttcattaa tttaacgtct tctgcagtcg caccgccacc tgcaaaacct gttgaagttt
    34321 taacgaagtc cgcacc
//
LOCUS       DALMNS010000017        34026 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.017, whole genome shotgun sequence.
ACCESSION   DALMNS010000017 DALMNS010000000
VERSION     DALMNS010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 34026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34026
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.017"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(413..1021)
                     /gene="plsY"
                     /locus_tag="O6Y56_000670"
     CDS             complement(413..1021)
                     /gene="plsY"
                     /locus_tag="O6Y56_000670"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDB5573961.1"
                     /translation="MMIIVMLLLSYLIGAFPSGFVIGKLFFKKDIRQFGSGNTGATNS
                     FRVLGRPAGFLVTFLDIFKGFITVFFPLWLPVHADGPISTFFTNGLIVGLFAILGHVY
                     PVYLKFQGGKAVATSAGVVLGVNPILLLILAIIFFIVLKIFKYVSLASIVAAICCVIG
                     SLIIQDYILLVVSFLVSIILIIRHRSNIARIFRGEEPKIKWM"
     gene            1227..3218
                     /gene="parE"
                     /locus_tag="O6Y56_000671"
     CDS             1227..3218
                     /gene="parE"
                     /locus_tag="O6Y56_000671"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HDB5573962.1"
                     /translation="MNKQNNYSDDSIQVLEGLEAVRKRPGMYIGSTDKRGLHHLVYEI
                     VDNSVDEVLNGYGNEIDVTINKDGSISIEDNGRGMPTGIHKSGKPTVEVIFTVLHAGG
                     KFGQGGYKTSGGLHGVGASVVNALSEWLEVEIHRDGNIYHQSFKNGGSPSSGLVKKGK
                     TKKTGTKVTFKPDDTIFKASTSFNFDVLSERLQESAFLLKNLKITLNDLRSGKERQEH
                     YHYEEGIKEFVSYVNEGKEVLHDVATFSGEANGIEVDVAFQYNDQYSESILSFVNNVR
                     TKDGGTHEVGFKTAMTRVFNDYARRINELKTKDKNLDGNDIREGLTAVVSVRIPEELL
                     QFEGQTKSKLGTSEARSAVDSVVADKLPFYLEEKGQLSKSLVKKAIKAQQAREAARKA
                     REDARSGKKNKRKDTLLSGKLTPAQSKNTDKNELYLVEGDSAGGSAKLGRDRKFQAIL
                     PLRGKVINTEKARLEDIFKNEEINTIIHTIGAGVGTDFKIEDSNYNRVIIMTDADTDG
                     AHIQVLLLTFFFKYMKPLVQAGRVFIALPPLYKLEKGKGKTKRVEYAWTDEELNKLQK
                     ELGKGFTLQRYKGLGEMNPEQLWETTMNPETRTLIRVQVEDEVRSSKRVTTLMGDKVQ
                     PRREWIEKHVEFGMQEDQSILDNSEVQVLENDQFDEEEI"
     gene            3218..5620
                     /gene="parC"
                     /locus_tag="O6Y56_000672"
     CDS             3218..5620
                     /gene="parC"
                     /locus_tag="O6Y56_000672"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HDB5573963.1"
                     /translation="MSEIIQDLSLEDVLGDRFGRYSKYIIQERALPDVRDGLKPVQRR
                     ILYAMYSSGNTHDKNFRKSAKTVGDVIGQYHPHGDSSVYEAMVRLSQDWKLRHVLIEM
                     HGNNGSIDNDPPAAMRYTEAKLSLLAEELLRDINKETVSFIPNYDDTTLEPMVLPSRF
                     PNLLVNGSTGISAGYATDIPPHNLAEVIQATLKYIDNPDITVNQLMKYIKGPDFPTGG
                     IIQGIDGIKKAYESGKGRIIVRSKVEEETLRNGRKQLIITEIPYEVNKSSLVKRIDEL
                     RADKKVDGIVEVRDETDRTGLRIAIELKKDVNSESIKNYLYKNSDLQISYNFNMVAIS
                     DGRPKLMGIRQIIDSYLNHQIEVVANRTKFELDNAEKRMHIVEGLIKALSILDKVIEL
                     IRSSKNKRDAKENLIEVYEFTEEQAEAIVMLQLYRLTNTDIVALEGEHKELEALIKQL
                     RHILDNHDALLNVIKEELNEIKKKFKSERLSLVEAEIEEIKIDKEVMVPSEEVILSMT
                     RHGYIKRTSIRSFNASGVEDIGLKDGDSLLKHQEVNTQDTVLVFTNKGRYLFIPVHKL
                     ADIRWKELGQHVSQIVPIEEDEVVINVFNEKDFNTDAFYVFATQNGMIKKSTVPLFKT
                     TRFNKPLIATKVKENDDLISVMRFEKDQLITIITNKGMSLTYNTSELSDTGLRAAGVK
                     SINLKAEDFVVMTEGVSENDTILMATQRGSLKRISFKILQVAKRAQRGITLLKELKKN
                     PHRIVAAHVVTGEHSQYTLYSKSNEEDGLINDIHKSEQYTNGSFIVDTDDFGEVIDMY
                     IS"
     gene            5870..7330
                     /locus_tag="O6Y56_000673"
     CDS             5870..7330
                     /locus_tag="O6Y56_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HDB5573964.1"
                     /translation="MKDFDSLIPGWFKEFVHVGTDLIWSQYLIGLLLTAGFFFTISSK
                     FVQLRMLPEMFRALVERPETLEDGKKGISPFQAFAISAGSRVGTGNIAGVATAIVLGG
                     PGAVFWMWVIAFIGAASAFIEATLAQVYKVHDKDGGFRGGPAYYITKGLNQKWLGIVF
                     AILITITFAFVFNTVQSNTIAESLNTQYNISPVITGIILAIVTAIIIFGGVRSIATLS
                     SLIVPIMAIIYIGMVLVILLFNLDQIVPMIGTIIKSAFGIEQVTGGAVGAAVLQGIKR
                     GLFSNEAGMGSAPNAAATAAVPHPVKQGLIQSLGVFFDTMLVCTATAIMILLYSGLKF
                     GESAPQGVAVTQSALNEHLGSAGGIFLTIAVTLFAFSSVVGNYYYGQSNIEFLSTNRV
                     ILFIFRCLVVVLVFMGAVAKTETVWNTADLFMGLMAIVNIISIIGLSNVAFALMKDYQ
                     KQKKEGKNPVFKPENLEINLFGISAWGANKYKNSDK"
     gene            7830..8681
                     /locus_tag="O6Y56_000674"
     CDS             7830..8681
                     /locus_tag="O6Y56_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator"
                     /protein_id="HDB5573965.1"
                     /translation="MGEYIVTKTLNNNVVVCTNNDQEVILIGKGIGFNKKEGMALNDQ
                     TITIEKIYKLESEQQKAHYKSLVEIADDNVLQVIIDSLNFISNTAMNVDSKQLVVSLT
                     DHIIFAYKRLKQNQVISNPFVMETMQLYSDAYHIAKQVIDQLNAALDVHFPEDEIGFI
                     ALHIASNTEDLSMHEMTLINNVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRR
                     LRRKEYIHAQDDFVSMIKNHYPICYNTAYKILTMIQKQFDVNISESEIIYLTLHIHHF
                     EERINQS"
     gene            8656..8823
                     /locus_tag="O6Y56_000675"
     CDS             8656..8823
                     /locus_tag="O6Y56_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573966.1"
                     /translation="MKKGLINPKLSVLHGRFVTVKGICMVSLMLVILHKWTVFIQHLM
                     NILSGGESIIE"
     gene            8816..10024
                     /locus_tag="O6Y56_000676"
     CDS             8816..10024
                     /locus_tag="O6Y56_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDB5573967.1"
                     /translation="MNENEKNIRKNFLKFTESRYMKFVGGNDLVFSLIALVLLGIVIF
                     IFEKVSYVFDPFIIVFKTIAAPIIVSLILFYLFNPIVNMMERYRIPRVAGISIIYLAV
                     VGVITLIVNLLIPIIGSQVDSLVKNSPQYLEKLINSIDKIANNTFFSSYYSQINDWLN
                     SLPKKIPSMLSEFTDGFGSKIATFAETIANIGVVIVTTPFVLFFMLKDGHHFKEFSTN
                     IMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIA
                     AVTSVVPYLGPTIAISPAIVIAAITSPWMLLKLAVVWTLVQFVEGHFISPNIMGKTLK
                     IHPLTIIFILLCAGKLLGIVGVILGIPGYAILKVLVTHLFQLFKRRYNRFYGNDVGEY
                     DIKESNKIVE"
     gene            10505..13027
                     /gene="mprF"
                     /locus_tag="O6Y56_000677"
     CDS             10505..13027
                     /gene="mprF"
                     /locus_tag="O6Y56_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional lysylphosphatidylglycerol
                     flippase/synthetase MprF"
                     /protein_id="HDB5573968.1"
                     /translation="MNQEVKNKIFSILKITFATALFIFVVITLYRELSGINFKDTLVE
                     FSKINRMSLVLLFIGGGASLVILSMYDVILSRALKMDISLGKVLRVSYIINALNAIVG
                     FGGFIGAGVRAMVYKNYTHDKKKLVHFISLILISMLTGLSLLSLLIVFHVFDASLILD
                     KITWVRWVLYAVSLFLPLFIIYSMVRPPDKNNRYVGLYCTLVSCVEWLAAAVVLYFCG
                     VIVDVHVSFMSFIAIFIIAALSGLVSFIPGGFGAFDLVVLLGFKTLGVPEEKVLLMLL
                     LYRFAYYFVPVIIALILSSFEFGTSAKKYIEGSKYFIPAKDVTSFLMSYQKDIIAKIP
                     SLSLAILVFFTSMIFFVNNLTIVYDALYDGNHLTYYILLAIHTSACLLLLLNVVGIYK
                     QSRRAIIFAMISILLITVATFFTYASYILITWLAIIFVLLIVAFRRARRLKRPVRMRN
                     IVAMLLFSLFILYVNHIFIAGTLYALDIYTIEMHTSVLRYYFWLTILIIAIIIGMIAW
                     LFDYQFSKVRISSKIEDCEEIINQYGGNYLSHLIYSGDKQFFTNENKTAFLMYRYKAS
                     SLVVLGDPIGDENAFDELLEAFYNYAEYLGYDVIFYQVTDQHMPLYHNFGNQFFKLGE
                     EAIIDLTQFSTSGKKRRGFRATLNKFDELNISFEIIEPPFSTEFINELQHVSDLWLDN
                     RQEMHFSVGQFNEEYLSKAPIGVMRNEENEVIAFCSLMPTYFNDAISVDLIRWLPELD
                     LPLMDGLYLHMLLWSKEQGYTKFNMGMATLSNVGQLHYSYLRERLAGRVFEHFNGLYR
                     FQGLRRYKSKYNPNWEPRFLVYRKDNSLWESLSKVMRVIRHK"
     gene            complement(13217..13726)
                     /gene="msrA"
                     /locus_tag="O6Y56_000678"
     CDS             complement(13217..13726)
                     /gene="msrA"
                     /locus_tag="O6Y56_000678"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDB5573969.1"
                     /translation="MNINTAYFAGGCFWCMTKPFDTFDGIEKVTSGYMGGHIENPTYE
                     QVKSGTSGHLETVEIQYDVALFSYNKLLEIFFSVIDPLDTGGQYQDRGPQYQTAIFYT
                     NDHQKELAETYIEQLKNTINADKAIATKILPASQFYKAEDYHQDFYKKNPERYAEEQK
                     IRQEYKNKQ"
     gene            13863..14846
                     /locus_tag="O6Y56_000679"
     CDS             13863..14846
                     /locus_tag="O6Y56_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HDB5573970.1"
                     /translation="MDKETNDNEYRRQSEHRTSAPKRKKKKKIRKLPIILLIVVILLI
                     ALVVYIVHSYNSGVEYAKKHAKDVKVHQFNGPVKNDGKISILVLGADKAQGGQSRTDS
                     IMVVQYDFINKKMKMMSVMRDIYADIPGYGKHKINSAYALGGPELLRKTLDKNLGINP
                     EYYAVVDFTGFEKMIDELMPEGVPINVEKDMSKNIGVSLKKGNHRLNGKELLGYARFR
                     HDPEGDFGRVRRQQQVMQTLKKEMVNFRTVVKLPKVAGILRGYVNTNIPDSGIFQTGL
                     SFGIRGEKDVKSLTVPIKNSYEDVNTNTDGSALQINKNTNKQAIKDFLDED"
     gene            complement(14934..15119)
                     /locus_tag="O6Y56_000680"
     CDS             complement(14934..15119)
                     /locus_tag="O6Y56_000680"
                     /EC_number="5.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase"
                     /protein_id="HDB5573971.1"
                     /translation="MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIE
                     EMKPNHYGVAGVRKSDQ"
     gene            15267..16529
                     /locus_tag="O6Y56_000681"
     CDS             15267..16529
                     /locus_tag="O6Y56_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HDB5573972.1"
                     /translation="MYNYHLLEDRDVLCIDQKSFFASVSCIEKGLDPLETKLAVVADT
                     KRQGSVVLAATPKLKELGIKTGSRLFEIPHRNDIYIINPSMRKYLNVSVAISKIALRY
                     IPPEDLHQYSIDEFFMDVTDSYHRFSSTVHAFCERLKREIYEETGIYCTVGIGSNMLL
                     SKIAMDVEAKHNQNGIAEWRYQDVPTKLWPIQPLRDFWGINRRTEAKLNKRGIFTIGD
                     LAKYPYKFLKKEFGILGVDMHLHANGIDQSKVREKHKISNPSICKSQILMRDYHFDEA
                     KVVMQELIEDVASRVRARKKVARTIHFAFGYSDEGGVHKQYTLKDPTNLEKDIYKVVM
                     HFADKLCNKQALYRTLSISLSQFINEDERQLSLFEDEYQRKRDECLAKTIDQLHLKYG
                     KGIVSKAVSFTEAGTKHGRLGLMAGHKM"
     gene            complement(16666..17757)
                     /locus_tag="O6Y56_000682"
     CDS             complement(16666..17757)
                     /locus_tag="O6Y56_000682"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HDB5573973.1"
                     /translation="MTTVLFVGLGLIGGSLASNIKYYNPNANIIAYDADTSQLDKAKS
                     IGIINEKCLNYSEAIKKADVIIYATPVAITNKYLSELIDMPTKPGVIVSDTGSTKAMI
                     QQHECNLLKHNIHLVSGHPMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLK
                     ELLSPTLAKFIITTAEEHDYVTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGF
                     RDITRIASSNAQMWKDITLSNKTYILEMIGQLKSQFQDLEKLIESNDSEKLLSFFAEA
                     KSYRDALPAKQLGGLNTAYDLYVDIPDESGMISKVTYILSLHNISISNLRILEVREDI
                     YGALKISFKNPTDRERGMQALSDFDCYIQ"
     gene            17922..18953
                     /locus_tag="O6Y56_000683"
     CDS             17922..18953
                     /locus_tag="O6Y56_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HDB5573974.1"
                     /translation="MEPILEMIKTLTGINSPSGDTEEAIQFVEKYAKDLGYQTTLTNK
                     GALLITVPGKNDEVQRCITAHVDTLGAMVKEIKEDGRLAIELIGGFTYNAIEGEYCQI
                     KTDAGQIYTGTICLHETSVHVYRNNHEIPRDQKHMEIRIDEVTTSEEDTKSLGISVGD
                     FVSFDPRTVITSSGFIKSRHLDDKASVAMILQLLKKLKEEQIILPHTTQFYISNNEEI
                     GYGANASIDSKIKEYIALDMGALGDGQASDEYTVSICAKDASGPYHKQLKSHLVNLCK
                     INNIPYKVDIYPYYGSDASAALHAGADIRHGLFGAGIESSHAMERTHIDSIKATEKLL
                     YAYCLSPIE"
     gene            19445..20851
                     /locus_tag="O6Y56_000684"
     CDS             19445..20851
                     /locus_tag="O6Y56_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HDB5573975.1"
                     /translation="MDVFYKKIKANVTPEVLAQLHSKKIILESTNQQQTKGRYSIVIF
                     DIYGTLTLDNDVLSVSTLKESYQITERPYHYLTTKINEDYHNIQDNQLKPLPFISGYV
                     GTCSFDLVRHEFPKLQSIQLEDHKQHDVRLYMVEQVYVFDHYKDELYIIATNQISNST
                     KSDFENRVNKSIEDLTKIQPFMPTQDFDFKTKEIQSNISEERFIEMIQYFKEKIAEGD
                     MFQVVPSRIYKYAHHANQHLNQLTFQLYQNLKRQNPSPYMYYLNIDKPYIVGSSPESF
                     VSVKDQIVTTNPIAGTIQRGETTKIDNENMKQLLNDPKECSEHRMLVDLGRNDIHRVS
                     KIGTSKITKLMVIEKYEHVMHIVSEVTGKINQNLSPMTVIANLLPTGTVSGAPKLRAI
                     ERIYEQYPHKRGVYSGGVGYINCNHNLDFALAIRTMMIDEQYINVEAGCGVVYDSIPE
                     KELNETKLKAKSLLEVSP"
     gene            20848..21414
                     /locus_tag="O6Y56_000685"
     CDS             20848..21414
                     /locus_tag="O6Y56_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDB5573976.1"
                     /translation="MILVVDNYDSFTYNLVDIVAQHTDVIVQYPDDDGVLNQSVDAVI
                     ISPGPGHPLDDQQLMKIISTYQDKPILGICLGAQALTCYYGGEVIKGDKVMHGKVDTI
                     SITSNTHKVLYHDVPEQFSIMRYHSLISNPDNFPEELKITGRTEDCIQSFEHNERPHY
                     GIQYHPESFATDYGVKIITNFIKLVKKG"
     gene            21420..22418
                     /gene="trpD"
                     /locus_tag="O6Y56_000686"
     CDS             21420..22418
                     /gene="trpD"
                     /locus_tag="O6Y56_000686"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDB5573977.1"
                     /translation="MTLLTRIKTETILLESDIKELIDILISPSIGTDIKYELLSSYSE
                     REIQQQELTYIVRSLINTMYPHQPCYEGAMCVCGTGGDKSNSFNISTTVAFVVASAGV
                     KVIKHGNKSITSNSGSTDLLNQMNIQTTTVDDTPNQLNEKDLVFIGATESYPIMKYMQ
                     PVRKMIGKPTILNLVGPLINPYHLTYQMVGVFDPTKLKLVAKTIKDLGRKRAIVLHGA
                     NGMDEATLSGDNLIYELTEDGEIKNYTLNATDYGLKHAPNSDFKGGSPEENLAISLNI
                     LNGKDQSSRRDVVLLNAGLSLYVAEKVDTIAEGIELATTLIDNGKALKKYHQMRGE"
     gene            22420..23201
                     /gene="trpC"
                     /locus_tag="O6Y56_000687"
                     /pseudo
     CDS             22420..23201
                     /gene="trpC"
                     /locus_tag="O6Y56_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499896.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
     gene            23201..23833
                     /locus_tag="O6Y56_000688"
                     /pseudo
     CDS             23201..23833
                     /locus_tag="O6Y56_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499897.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
     gene            23826..25040
                     /gene="trpB"
                     /locus_tag="O6Y56_000689"
     CDS             23826..25040
                     /gene="trpB"
                     /locus_tag="O6Y56_000689"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDB5573978.1"
                     /translation="MNKQIQTEADELGFFGEYGGQYVPETLMPAIIELKKAYKEAKAD
                     PEFQRELEYYLSEYVGRATPLTYAASYTESLGGAKIYLKREDLNHTGAHKINNALGQA
                     LLAKRMGKKKLVAETGAGQHGVASATVAALFDMELVVFMGSEDIKRQQLNVFRMELLG
                     AKVVAVKDGQGTLSDAVNKALQYWVSHVDDTHYLLGSALGPDPFPTIVRDFQSVIGKE
                     IKSQILKKEGRLPDAIVACIGGGSNAIGTFYPFIKDDVALYGVEAAGQGEDTDKHALA
                     IGKGSPGVLHGTKMYLIQDEGGQVQLAHSISAGLDYPGIGPEHSYYHDIGRVTFENAS
                     DTQAMNALINFTKHEGIIPAIESAHALSYVERLAPTMSKEDIIVVTISGRGDKDMETI
                     RQYMAERGLAND"
     gene            25033..25761
                     /locus_tag="O6Y56_000690"
     CDS             25033..25761
                     /locus_tag="O6Y56_000690"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDB5573979.1"
                     /translation="MTKLFIPYIMGNKDLIENATLLSENGADIIEIGVPFSDPVADGP
                     VIMEAGQQAIKQGITIDYIFEQLEKHGNQIKCQYVLMTYYNIICHYGEQAFFEKCRDT
                     GVYGLIIPDLPFELSQRLKQQFSHYGVKIISLVAMTTDDKRIKDIVSHAEGFIYTVTM
                     NATTGQNGAFHPELKRKIESIKAIANVPVVAGFGIRTPQHVADIKEVADGIVIGSEIV
                     KRFKSNTREEIIKYLQSIQQTLNN"
     gene            26083..27345
                     /gene="femA"
                     /locus_tag="O6Y56_000691"
     CDS             26083..27345
                     /gene="femA"
                     /locus_tag="O6Y56_000691"
                     /EC_number="2.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine glycyltransferase FemA"
                     /protein_id="HDB5573980.1"
                     /translation="MKFTNLTAKEFGAFTDSMPYSHFTQTVGHYELKLAEGYETHLVG
                     IKNNNNEVIAACLLTAVPVMKVFKYFYSNRGPVIDYENQELVHFFFNELSKYVKKHRC
                     LYLHIDPYLPYQYLNHDGEITGNAGNDWFFDKMSNLGFEHTGFHKGFDPVLQIRYHSV
                     LDLKDKTADDIIKNMDGLRKRNTKKVKKNGVKVRYLSEEELPIFRSFMEDTSESKAFA
                     DRDDKFYYNRLKYYKDRVLVPLAYINFDEYIKELNEERDILNKDLNKALKDIEKRPEN
                     KKAHNKRDNLQQQLDANEQKIEEGKRLQEEHGNELPISAGFFFINPFEVVYYAGGTSN
                     AFRHFAGSYAVQWEMINYALNHGIDRYNFYGVSGKFTEDAEDAGVVKFKKGYNAEIIE
                     YVGDFIKPINKPVYAAYTALKKVKDRIF"
     gene            27364..28623
                     /gene="femB"
                     /locus_tag="O6Y56_000692"
     CDS             27364..28623
                     /gene="femB"
                     /locus_tag="O6Y56_000692"
                     /EC_number="2.3.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine glycyltransferase FemB"
                     /protein_id="HDB5573981.1"
                     /translation="MKFTELTVTEFDNFVQNPSLESHYFQVKENIVTRENDGFEVVLL
                     GIKDDNNKVIAASLFSKIPTMGSYVYYSNRGPVMDFSDLGLVDYYLKELDKYLQQHQC
                     LYVKLDPYWLYHLYDKDIVPFEGREKNDALVNLFKSHGYEHHGFTTEYDTSSQVRWMG
                     VLNLEGKTPETLKKTFDSQRKRNINKAINYGVKVRFLERDEFNLFLDLYRETEERAGF
                     VSKTDDYFYNFIDTYGDKVLVPLAYIDLDEYVLKLQQELNDKENRRDQMMAKENKSDK
                     QMKKIAELDKQIDHDQHELLNASELSKTDGPILNLASGVYFANAYEVNYFSGGSSEKY
                     NQFMGPYMMHWFMINYCFDNGYDRYNFYGLSGDFTENSEDYGVYRFKRGFNVQIEELI
                     GDFYKPIHKVKYWLFTTLDKLRKKLKK"
     gene            29307..30074
                     /locus_tag="O6Y56_000693"
     CDS             29307..30074
                     /locus_tag="O6Y56_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDB5573982.1"
                     /translation="MRFVFDIDGTLCFDGRLIDQTIIDTLLQLQHAGHELIFASARPI
                     RDLLPVLPSVFHQHTLIGANGAMISQQSKISVIKPIHTDTYHHILKIIQKYELDYIID
                     DDWNYAAQLDAENAIFERLDPHKLASCIDVANIDTPIKIILLNIDVAQITTILDELNK
                     CHQELEMIHHSNEYNIDITAQNINKYTALQYIFDADVKYIAFGNDHNDIVMLQHASSG
                     YIIGPSEAYTQAILKLDKIKHIDNNAQAICKVLKSYK"
     gene            complement(30122..30595)
                     /locus_tag="O6Y56_000694"
     CDS             complement(30122..30595)
                     /locus_tag="O6Y56_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger family protein"
                     /protein_id="HDB5573983.1"
                     /translation="MGLLDIASIRSIERGFNYYQSECVINLKSFSEMQHEAEVKGSGN
                     KVYRCYIDMEHPRKSKCNCPHADGRRVICKHMIALLFTASPEAANKHIIMLNEVEEDY
                     HLRRNMWIDFLKEMINDMSEEELRDAYLNMLIEHGEMAELFGLDEEDEMFEDEFY"
     gene            complement(30719..31420)
                     /locus_tag="O6Y56_000695"
     CDS             complement(30719..31420)
                     /locus_tag="O6Y56_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5573984.1"
                     /translation="MIELKHVTFGYNKKQMVLQDINISIPDGENVGILGESGCGKSTL
                     ASLVLGLFKPVKGEIYLSDNAVLPIFQHPLTSFNPDWTIETSLKEALYYYRGLTDNAA
                     QDQLLIQHLSTFELNAQLLTKLPSEVSGGQLQRFNVMRSLLVQPRVLICDEITSNLDV
                     IAEQNVINILKAQTITNLNHFIVISHDLSVLQRLVNRIIVLKDGMIVDDFTIEELFNV
                     DRHPYTKELVQTFSY"
     gene            complement(31413..32186)
                     /locus_tag="O6Y56_000696"
     CDS             complement(31413..32186)
                     /locus_tag="O6Y56_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5573985.1"
                     /translation="MSLIDIQNLTIKNTSEKSLIKGIDLKIFSQQINALIGESGAGKS
                     LIAKALLEYLPFDLTCTYDSYQFDGENVSRLSKYYGHTIGYISQNYAESFNDHTKLGK
                     QLTAIYRKHYKSSKEEALSKIDKALSWVNLQSKDILNKYSFQLSGGLLERVYIASVLM
                     LEPKLIIADEPVASLDALNGNQVMDLLQHIVLEHGQTLFIITHNLSHVLKYCQYINVL
                     KEGQIIEQGNINHFKHEHLHPYTEHLIKYRTQLKRDYYD"
     gene            complement(32173..33003)
                     /locus_tag="O6Y56_000697"
     CDS             complement(32173..33003)
                     /locus_tag="O6Y56_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5573986.1"
                     /translation="MHKIFSKNNLIFFVFGAFIFVMIVLQFFVSSENATKVNLSQTFE
                     PISWLHLLGTDDYGRDLFTRIIIGARSTLFVTVLTLIAIVVIGVTLGLFAGYKKGWIE
                     RLVLRFIDVGLSIPEFIIMIALASFFQPSLWNLVTSITIIKWMNYTRLTRSIVNSEMN
                     KPYIKMAQLFHVPTRTILICHLTPKIIPAIIVLMVVDFGKIILYISSLSFIGLGAQPP
                     TPEWGAMLQQGRDFISSHPIMLIAPASVIAITILIFNLTGDALRDRLLKQRGEYDESH
                     "
     gene            complement(32996..33982)
                     /locus_tag="O6Y56_000698"
     CDS             complement(32996..33982)
                     /locus_tag="O6Y56_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5573987.1"
                     /translation="MFIIKSMLYRLMQMIVVLFVISTLTFILMKLSPGNPVDKILHLD
                     VAQVSTEQINATKDKLGLNDSLLVQWWHWMNHLLHFNLGKSFESKEPVTQILFNYAPI
                     TLLISFSTLVVSLCISIPLSIIAAKRFHKLSDKVIRVISTLLISLPAFFIGIILLFIV
                     TNLMNIDSVILSQFVLPVFTLSLGMCAYIIRLVRSNLLTLLQSNIVQASRLRGMNERY
                     ILIHDLLKPTILPIIPLLGISLGSLIGGTVVIENLFDIPGIGYLLMDSIKSRDYPVIQ
                     GCVLFIGFFVVIINTIADLLTLLLDPKQRLQLGNPKNKTNTPLISESSDRHA"
BASE COUNT        12015 a         4932 c         6000 g        11079 t
ORIGIN      
        1 caagttactg ctgcatcagt aagttctatt tgcataacaa tgacctccta aatttattac
       61 agaatgggag tgggccccaa ttcatattgt ttgtgggatt tcttttcgaa attctctgtg
      121 ttggagccca ccccaacctg cacattattg taagctgaat ttccataagc ttctatgttg
      181 ggacccccga ccagaattga aaaaacctag ttataagcgc atttcattct gtcaactaca
      241 gctaatataa cattgtgtag cctatgacat tgatctatgt ctcgatctca aatgttcttg
      301 taaaaaaact aagtatagtt gaattttaag ttaaaaaaat tgtttttgca aaaataaaat
      361 aatccatcaa ctgcaaaaaa atatgcaatg atggactaat gtcaaaaaat tgttacatcc
      421 attttatttt aggttcttcg cctctaaaaa ttcttgcgat attagagcga tgtctaatta
      481 tcaatatgat tgaaactaag aaactaacga ctaataaaat atagtcttga atgataagcg
      541 agccaatcac acagcaaatt gctgcaacga tacttgctaa agaaacatat ttaaaaatct
      601 tcaatacaat aaagaagata attgcaagta ttagtaaaag tatcgggttg actcccaaga
      661 cgacacctgc actagttgca accgctttgc caccttggaa ttttaaataa acaggataaa
      721 cgtgtccaag tatagcgaat aagccaacaa ttaaaccatt tgtaaaaaaa gtactaatag
      781 ggccatctgc gtgaactggt aaccataaag ggaagaaaac agttatgaac cctttgaaaa
      841 tatctagaaa tgttaccaag aatcctgcag gacgacctaa tactctaaag ctattagtag
      901 cgccagtatt accactacca aattgtctaa tatctttttt gaaaaataat tttccaatta
      961 cgaatccact tgggaaagcg ccgataagat aacttagtag taacatgacg attatcatca
     1021 taaatattac acatccttta atatcttagg actattttat catattcgtt taaattacgg
     1081 ctaaaatttt taaaaacagg gattaatata tggaattaag ctatgaaagt taattgatac
     1141 ttgcatttta cgctgattta tataagaata actattgtat agttttaaaa acgaacgtac
     1201 gtttgcagga ggcgaaatca ttggcaatga ataaacaaaa taattattca gatgattcaa
     1261 tacaggtttt agaggggtta gaagcagttc gtaaaagacc tggtatgtat attggatcaa
     1321 ctgataaacg gggattacat catctagtat atgaaattgt cgataactcc gtcgatgaag
     1381 tattgaatgg ttacggtaac gaaatagatg taacaattaa taaagatggt agtatttcta
     1441 tagaagataa tggacgtggt atgccaacag gtatacataa atcaggtaaa ccgacagtag
     1501 aagttatctt tactgtttta catgcaggag gtaaatttgg acaaggcggc tataaaactt
     1561 caggtggtct tcacggcgtt ggtgcttcag ttgtaaatgc attgagtgaa tggcttgaag
     1621 ttgaaatcca tcgagatggt aatatatatc atcaaagttt taaaaacggt ggttcgccat
     1681 cttctggttt agtgaaaaaa ggtaaaacta agaaaacagg taccaaagta acatttaaac
     1741 ctgatgatac aatttttaaa gcatctacat catttaattt tgatgtttta agtgaacgac
     1801 tacaagagtc tgcgttctta ttgaaaaatt taaaaataac gcttaatgat ttacgcagtg
     1861 gtaaagagcg tcaagagcat taccattatg aagaaggaat caaagagttt gttagttatg
     1921 tcaatgaagg aaaagaagtt ttgcatgacg tggctacatt ttcaggtgaa gcaaatggta
     1981 tagaggtaga cgtagctttc caatataatg atcaatattc agaaagtatt ttaagtttcg
     2041 taaataatgt acgtactaaa gatggtggta cacatgaagt tggttttaaa acagcaatga
     2101 cacgtgtatt taatgattat gcacgtcgta ttaatgaact taaaacaaaa gataaaaact
     2161 tagacggtaa tgatattcgt gaaggtttaa cagctgttgt gtctgtacgt attccagaag
     2221 aattactaca atttgaagga caaacgaaat ctaaattggg tacttctgaa gcaagaagtg
     2281 ctgttgattc agttgttgca gacaaattgc cattctattt agaagaaaaa ggacaattgt
     2341 ctaaatcact tgtaaaaaaa gcgattaaag cacaacaagc aagggaagct gcacgtaaag
     2401 ctcgtgaaga tgctcgttca ggtaagaaaa acaagcgtaa agacactttg ctatctggta
     2461 aattaacacc tgcacaaagt aaaaacactg ataaaaatga attgtattta gtcgaaggtg
     2521 attctgcggg aggttcagca aaacttggac gagaccgcaa attccaagcg atattaccat
     2581 tacgtggtaa ggtaattaat acagagaaag cacgtctgga agatattttt aaaaatgaag
     2641 aaattaatac aattatccac acaatcgggg caggcgttgg tactgacttt aaaattgaag
     2701 atagtaacta taatcgtgta attattatga ctgatgctga tactgatggt gcgcatattc
     2761 aagtgctatt gttaacattc ttcttcaaat atatgaaacc gcttgttcaa gcaggtcgtg
     2821 tatttattgc tttacctcca ctttataaat tggaaaaagg taaaggcaaa acaaagagag
     2881 ttgaatacgc ttggactgac gaagagctta ataaattaca aaaagaactt ggtaaaggct
     2941 tcacgttaca acgttacaaa ggtttgggtg aaatgaaccc tgaacaatta tgggaaacga
     3001 cgatgaaccc agaaacacga actttaattc gtgtacaagt tgaagatgaa gtgcgttcat
     3061 ctaaacgtgt aacaacatta atgggtgaca aagtacaacc tagacgtgaa tggattgaaa
     3121 agcatgttga gtttggtatg caagaggacc aaagtatttt agataattct gaagtacaag
     3181 tgcttgaaaa tgatcaattt gatgaggagg aaatctagtg agtgaaataa ttcaagattt
     3241 atcacttgaa gatgttttag gtgatcgctt tggaagatat agtaaatata ttattcaaga
     3301 gcgtgcattg ccagatgttc gtgatggttt aaaacccgta caacgtcgta ttttatatgc
     3361 aatgtattca agtggtaata cacacgataa aaatttccgt aaaagtgcga aaacagtcgg
     3421 tgatgttatt ggtcaatatc atccacatgg agactcctca gtgtacgaag caatggtccg
     3481 tttaagtcaa gactggaagt tacgacatgt cttaatagaa atgcatggta ataatggtag
     3541 tatcgataat gatccgccag cggcaatgcg ttacactgaa gctaagttaa gcttactagc
     3601 tgaagagtta ttacgtgata ttaataaaga gacagtttct ttcattccaa actatgatga
     3661 tacgacactc gaaccaatgg tattgccatc aagatttcct aacttactag tgaatggttc
     3721 tacaggtata tctgcaggtt acgcgacaga tataccacca cataatttag ctgaagtgat
     3781 tcaagcaaca cttaaatata ttgataatcc ggatattaca gtcaatcaat taatgaaata
     3841 tattaaaggt cctgattttc caactggtgg tattattcaa ggtattgatg gtattaaaaa
     3901 agcttatgaa tcaggtaaag gtagaattat agttcgttct aaagttgaag aagaaacttt
     3961 acgcaatgga cgtaaacagt taattattac tgaaattcca tatgaagtga acaaaagtag
     4021 cttagtaaaa cgtatcgatg aattacgtgc tgacaaaaaa gtcgatggta tcgttgaagt
     4081 acgtgatgaa actgatagaa ctggtttacg aatagcaatt gaattgaaaa aagatgtgaa
     4141 cagtgaatca atcaaaaatt atctttataa aaactctgat ttacagattt catataattt
     4201 caacatggtc gctattagtg atggtcgtcc aaaattgatg ggtattcgtc aaattataga
     4261 tagttatttg aatcatcaaa ttgaggttgt tgcaaataga acgaagtttg aattagataa
     4321 tgctgaaaaa cgtatgcaca tcgtcgaagg tttgattaaa gcgttgtcaa ttttagataa
     4381 agtaatcgaa ttgattcgta gctctaaaaa caagcgtgac gctaaagaaa accttatcga
     4441 agtatacgag ttcacagaag aacaggctga agcaattgta atgttacagt tatatcgttt
     4501 aacaaacact gacatagttg cgcttgaagg tgaacataaa gaacttgaag cattaatcaa
     4561 acaattacgt catattcttg ataaccatga tgcattattg aatgtcataa aagaagaatt
     4621 gaatgaaatt aaaaagaaat tcaaatctga acgactgtct ttagttgaag cagaaattga
     4681 agaaattaaa attgacaaag aagttatggt gcctagtgaa gaagttattt taagtatgac
     4741 acgtcatgga tatattaaac gtacttctat tcgtagcttt aatgctagcg gtgttgaaga
     4801 tattggttta aaagatggtg acagtttact taaacatcaa gaagtaaata cgcaagatac
     4861 cgtactagta tttacaaata aaggtcgtta tctatttata ccggttcata aattagcaga
     4921 tattcgttgg aaagaattgg ggcaacatgt atcacaaata gttcctatcg aagaagatga
     4981 agtggttatt aatgtcttta atgaaaagga ctttaataca gatgcatttt atgtttttgc
     5041 gactcaaaat ggcatgatta agaaaagtac agtgcctcta tttaaaacaa cgcgttttaa
     5101 taaaccttta attgctacta aagttaaaga aaatgatgat ttgattagtg ttatgcgctt
     5161 tgaaaaagat caattaatta ccatcattac taataaaggt atgtcattaa cgtataatac
     5221 aagtgaacta tcagataccg gattaagggc agctggtgtt aaatcaataa atcttaaagc
     5281 tgaagatttc gttgttatga ctgaaggtgt ttctgaaaat gatactatat tgatggccac
     5341 acaacgcggc tcgttaaaac gtattagttt taaaatctta caagttgcta aaagagcaca
     5401 acgtggaata actttattaa aagaattaaa gaaaaatcca catcgtatag tagctgcaca
     5461 tgtagtgaca ggtgaacata gtcaatatac attatattca aaatcaaacg aagaagatgg
     5521 tttaattaat gatattcata aatctgagca atatacaaat ggctcattca ttgtagatac
     5581 agatgatttt ggtgaagtaa tagacatgta tattagctaa aaactatatg caatcacgaa
     5641 attaaatgat aaaatacagt aatgttaaat tttgactaaa ttcaagggat ttatattaaa
     5701 tgctgaccaa gtacttatcg ttaaattagc gatatacttt gaccaaacta atataaatct
     5761 cttgtattgt ataagaaatg atgacgtatc tctatattta ctgaagtttc aattcggtct
     5821 aattttatag aagatgcatg attcatgtag aggatgcgag gggtttattt tgaaagattt
     5881 cgatagttta attcctggat ggtttaaaga atttgtccat gttggtaccg atctaatatg
     5941 gtctcaatat ttaattggtc tattattgac agctggattc ttctttacaa ttagttctaa
     6001 attcgtccaa ttacgaatgt tacctgaaat gtttagagct ttagtagaac gtccagaaac
     6061 tttagaagat ggtaagaagg gtatttcgcc attccaagca tttgcgatta gtgctggttc
     6121 gagagttggt actggtaata ttgctggtgt tgcgactgcg attgttttag gcggtccagg
     6181 tgcagtattt tggatgtggg ttattgcatt tataggtgca gcgagtgcat ttatagaagc
     6241 gactttggct caggtttata aagtacatga taaagatggt ggattccgtg gtggtccagc
     6301 ttactatatt actaaaggtt taaatcaaaa atggctaggt atcgtatttg cgattttaat
     6361 tacaattaca tttgcatttg tatttaacac agtgcaatct aatacaattg cggagtcgtt
     6421 aaatacgcaa tataatatta gtccagtaat cacaggtatt attttagcaa tcgtaacagc
     6481 tattattata tttggtggtg tacgtagtat tgctacgtta tcttcgttaa ttgtaccgat
     6541 tatggctatc atttacattg gtatggtttt agtaatattg ctatttaatt tagatcaaat
     6601 tgttcctatg ataggtacga ttattaaaag tgcatttggt atcgaacaag taactggtgg
     6661 cgctgtaggt gctgcggttc ttcaaggtat caaacgtggt ttattctcta acgaagctgg
     6721 tatgggttct gcgccgaatg cagcggcaac tgctgccgta ccacaccctg ttaagcaagg
     6781 tttaatccaa tcattaggtg tgttctttga tacaatgttg gtttgtacag caactgcaat
     6841 catgatttta ctatattcag gattgaaatt tggtgaaagt gcaccacaag gtgttgcagt
     6901 tactcaatca gcacttaatg agcatttagg ttctgctgga ggtattttct taacaatagc
     6961 agttacactg tttgcatttt catctgtggt aggtaactac tattatggtc aatctaatat
     7021 tgaattttta tctacaaatc gtgtgatatt atttatcttt agatgtcttg ttgtagtact
     7081 tgtctttatg ggagctgttg ctaaaacaga aacagtatgg aatacagcag acttatttat
     7141 gggcttaatg gcaattgtaa acattatttc cattatagga ctgtccaatg tagcttttgc
     7201 attaatgaaa gattatcaaa agcagaaaaa agaaggcaag aatcctgtct ttaaacctga
     7261 aaacttagaa attaacttat ttggaattag tgcttggggc gctaacaaat ataagaactc
     7321 tgataaataa atatttttaa tgtaacgatt cattttataa aaatctaata aaccctgagg
     7381 ttttcaaatt aaagcgaaaa tctcggggtt ttaaatttgt actcaataat catctgtatc
     7441 attacactag ttaatctaag atttgattaa atattaacat aataagattg agatttattt
     7501 cctccattgg tgtgcaaaga ctataccatt aataagacat attgttagat agatgaatat
     7561 aaatttattt tagctttgca caatttaata gtacgtttta gtttgtattg agtattaatt
     7621 cagataatat ataaataaat agaattattt gtaaatatgg gagtcagatt tttttattat
     7681 agttattcca ctttgagagg catcgaaatt aaattaagat atatcatata ggataggcgt
     7741 gtaatagaac acaagtattt aaattattat actttcaagt tagacatttc cgatatataa
     7801 tcttaataat agaaaaatag gtgatgataa tgggagaata tattgttact aaaacattga
     7861 acaacaatgt cgtagtatgt actaataatg atcaagaagt tattttaatc ggtaaaggta
     7921 ttggttttaa caaaaaagag ggaatggcgt taaacgacca aactattaca atagagaaaa
     7981 tttataaatt agagagtgag caacaaaaag cacattataa aagtttagtt gaaatcgctg
     8041 atgacaatgt attacaagta attattgatt cgttaaattt tatttctaat actgcgatga
     8101 atgttgattc aaaacaactt gtagtttcat taacggatca tattatattt gcatataaac
     8161 gcttaaaaca aaatcaagtt attagcaatc catttgttat ggaaactatg cagttatata
     8221 gtgatgcata tcatattgct aaacaggtga ttgatcagtt aaatgcagca ttagatgtac
     8281 attttcctga agatgagata ggatttattg cattacatat tgcatctaac acagaagatt
     8341 tatctatgca tgagatgact ttgatcaata atgttattaa aaaaggtata gatatcattg
     8401 aatcagacct tgtgacaact gttgataagg aatcattaca ataccaacgt tttataagac
     8461 atgtacaatt tttaattcgc cgattaagaa gaaaagaata tatacatgca caagatgatt
     8521 ttgtgtctat gattaaaaat cactatccga tttgctataa cacagcatat aaaattttaa
     8581 ctatgataca aaaacaattt gatgttaata tcagtgagtc tgaaattata tatttaacat
     8641 tacacattca tcattttgaa gaaaggatta atcaatccta aattaagtgt attacacggg
     8701 cgtttcgtta ctgtaaaggg tatttgtatg gtatcattga tgttagtaat tttacataag
     8761 tggactgttt ttatacaaca tcttatgaat attttaagtg gtggtgaatc tataattgaa
     8821 tgaaaatgaa aagaatataa gaaagaactt tttaaaattt accgaatcac ggtatatgaa
     8881 gtttgttggt gggaatgatt tagtcttctc attaatagct ctagtattgt tgggtattgt
     8941 tatttttatt ttcgaaaaag tatcatacgt ttttgatcct tttatcatcg tttttaagac
     9001 gatagcagca cctatcatcg tctctttaat tctattctat ttatttaacc caatcgtaaa
     9061 tatgatggag cgttatagaa taccaagagt tgcaggtatt tctattattt atctagctgt
     9121 agtaggtgtt attacgttaa ttgttaattt attgatacct attattggtt cgcaagtaga
     9181 tagtttagtt aaaaattcac cgcaatatct agaaaaatta attaattcta ttgataaaat
     9241 agcaaataat acgtttttct cttcgtatta tagtcaaatt aatgattggt taaattcttt
     9301 acctaagaaa ataccatcta tgttaagtga atttacagat ggctttgggt ctaaaattgc
     9361 aacgtttgca gaaacgattg ctaatattgg cgttgtgatt gtcacaacac catttgtact
     9421 attctttatg cttaaagatg gacatcactt caaagaattt tcaacgaata ttatgccacc
     9481 gaaattccga aaagattttc atgatctact tgaaaaaatg agtgttcaag ttggttcata
     9541 cattcaagga caaattattg tttcattctg tatcggtata ctgttgttta tcggttattc
     9601 ggttatcggg ttgaaatata gtttagtgtt agctagtatt gcggcagtta caagtgttgt
     9661 gccatattta gggcctacta tagcgatttc accagctatt gtaatagctg ctataacatc
     9721 gccgtggatg ctcttaaaat tagcagtagt atggacttta gtacaatttg ttgaagggca
     9781 cttcatttca ccaaatatca tgggtaaaac acttaagatt catccactta caatcatttt
     9841 cattttactg tgtgcaggca aattgcttgg tattgtaggc gttattttag gtattccggg
     9901 atatgctatt ttaaaagtat tagttactca tttattccaa ttatttaaac gtcgatacaa
     9961 tcgtttctat ggtaatgatg taggtgaata tgatattaaa gaaagtaata aaatagttga
    10021 ataagtaatt aaaaatacca atagactata cgtttgttgg tatttttatg gtgcttataa
    10081 tgttgggcac tcacatttat gattatcagc acatgtttag cttataaatt tttacgaaag
    10141 gttagccctt tataaagcac atgtataatg aaacgagtat ttgccacttg attagtacct
    10201 cattatcatg acgaaaataa aaacaagtgg tatttttaat atattaagaa gcactcataa
    10261 tcagctgtta attaataata tttttcataa gtattgattc atcattttct ttatgttaaa
    10321 tatgaatcag tatagataac catattgttc tgtttgagat agtaatattt tctatttacc
    10381 tcttaataca gatgtcaata tgacaaaagt gttatataaa tcaaaggtaa atgatatgct
    10441 atttttatgg tttatatgat atattttgat ttataacaga aataattaga attgatgtga
    10501 aaaaatgaat caggaagtta aaaacaaaat attttcaatc ttaaaaatta cgtttgctac
    10561 agctttattt atttttgtag taatcacatt gtatcgggag ttatctggta ttaactttaa
    10621 agatacgttg gttgaattta gtaagattaa ccgtatgtcc ttagttttac tatttattgg
    10681 tggtggggca tcgcttgtta ttctatcaat gtatgatgtg attttatcta gagctttaaa
    10741 aatggatata tccttaggca aagttttaag agtaagttat atcatcaatg cattgaatgc
    10801 gattgtaggt ttcggtggct ttattggtgc aggcgttaga gcaatggttt ataaaaacta
    10861 tacgcatgat aaaaagaaat tagttcactt tatatcctta atacttattt caatgttgac
    10921 aggtttaagc ttattatcat tgttaattgt attccatgtt ttcgatgcat ctttaatttt
    10981 agataaaatt acgtgggtga gatgggtact ttatgctgtg tcgttgttct taccattatt
    11041 tattatatat tcaatggtta gaccgcccga taaaaacaat cgttatgtag gcttgtattg
    11101 tacattagtg tcatgtgtgg aatggttagc tgctgcagtt gtattatact tctgtggtgt
    11161 catagttgac gtccatgtct catttatgtc atttattgca atattcatta ttgctgcatt
    11221 atctggatta gtcagcttta ttcctggtgg tttcggcgct ttcgatttag ttgtattact
    11281 aggatttaaa actttaggtg tccctgagga aaaagtatta ttaatgctac ttctatatcg
    11341 ttttgcgtac tattttgtac cggtaattat tgcattaatt ttatcatcat ttgagtttgg
    11401 tacttcagct aagaaatata ttgaaggatc taaatatttc attccggcta aagatgttac
    11461 gtcattttta atgtcttatc aaaaggatat tattgctaaa attccatcat tgtcattagc
    11521 aattttagta ttctttacaa gtatgatctt ttttgtaaat aacttaacga ttgtttacga
    11581 tgctttatat gatggaaatc acttaacgta ttatatttta ttggcaattc atactagtgc
    11641 ttgtttatta cttttactga atgtagttgg tatttataag caaagtagac gtgccatcat
    11701 ctttgctatg atttcaattt tattaatcac agtggcgaca ttcttcactt acgcttcata
    11761 tattttaata acatggttag ctattatttt tgttcttctt attgtagctt tccgtagagc
    11821 acgtaggtta aaacgcccag taagaatgag aaatatagtt gcaatgcttt tattcagttt
    11881 atttatttta tatgttaacc atatatttat tgctggaacg ttatatgcat tagatattta
    11941 tacgattgaa atgcatacat ctgtattgcg ctattacttc tggcttacga ttttaatcat
    12001 cgctatcatc ataggtatga ttgcatggtt gtttgattat caatttagca aagtacgtat
    12061 ttcttctaaa attgaagatt gcgaggagat tattaatcag tatggcggta attatttgag
    12121 tcacttgata tatagtggtg acaagcagtt tttcactaat gaaaataaaa cagcattttt
    12181 aatgtatcgt tataaagcaa gttcattagt ggttcttggc gatccaatcg gtgatgaaaa
    12241 tgcctttgat gaattgttag aagcattcta taattacgct gagtatttag gctatgatgt
    12301 tatattctat caagttacag atcaacacat gccgttatat cataatttcg gtaaccaatt
    12361 tttcaaatta ggtgaagaag caattattga tttaacacaa ttttcaactt caggtaaaaa
    12421 acgccgtgga tttagagcga ctttaaacaa attcgatgaa cttaatattt cgttcgaaat
    12481 tattgaacca ccgttttcaa ctgaatttat aaatgaactt caacatgtaa gtgatttatg
    12541 gctagataat cgtcaggaaa tgcatttctc tgttggtcaa tttaatgaag aatacttatc
    12601 taaagcgcca attggtgtaa tgcgaaatga agagaatgaa gtaattgcat tttgtagttt
    12661 aatgccaaca tactttaatg atgccatttc agtcgattta attagatggt tgccagagtt
    12721 agatttacca ttaatggatg gtctatactt gcatatgtta ctttggagta aagaacaagg
    12781 ttatacaaaa tttaatatgg gtatggcaac gttatcgaac gttggtcaat tgcattattc
    12841 atatttaaga gaacgacttg caggccgtgt ctttgaacat ttcaacggtc tatatcgttt
    12901 ccaaggatta cgtcgttata aatctaaata taatccaaat tgggaaccac gctttttagt
    12961 ttatcgtaaa gataattcgc tttgggaatc actttctaaa gtaatgcgtg taatacgtca
    13021 caaataataa aaatccaagt gctaagaggt atacagtttt gcctgaagcg cttggatttt
    13081 ttcgtttcta taaagaatga tttataaaaa acggtacaga taagaatatt taagtttcct
    13141 atctgtaccg tattttaata ttgaaatgag cttaagttga gtcgcctaac ttaatcagtt
    13201 tcatcaagta taaatgttat tgcttatttt tgtattcttg gcgtattttt tgttcttctg
    13261 catagcgctc tggatttttc ttgtaaaaat cttggtgata gtcttcggct ttgtaaaatt
    13321 gtgacgctgg caatattttt gttgcaattg ccttatcagc attaatcgta tttttaagct
    13381 gctcgatata agtctcagcg agttcttttt gatgatcatt agtgtagaaa atagctgttt
    13441 gatattgagg accacggtct tgatattgac cacctgtatc taatgggtca atgactgaga
    13501 aaaatatttc taataactta ttgtatgaga ataatgcaac atcatattga atttcaacag
    13561 tttctaaatg accactcgta cctgatttta cttgttcgta agtaggattt tcaatatgtc
    13621 cgcccatata tccagaagtt actttttcta tgccgtcaaa ggtgtcaaat ggtttcgtca
    13681 tacaccaaaa acaacctccg gcaaaataag ctgtattaat attcattttt gacatccttt
    13741 cattagacct tagtacgatt tattaagaaa tcacttgctt tttgaattgt ttttatataa
    13801 cgttaatatg tgattattat agtacacaaa aatctatttt tgaagatata aggtaggtaa
    13861 atatggataa agaaactaat gacaacgaat atagacgtca aagtgaacat cgcacttcgg
    13921 cgcctaagcg aaaaaagaag aagaaaatta ggaaattacc tatcattctt ctgattgttg
    13981 taattttact tatcgcatta gttgtatata ttgtacatag ttacaatagc ggtgtagaat
    14041 atgccaagaa acatgcgaaa gatgttaaag tacatcaatt taatggacca gtaaaaaatg
    14101 atggtaaaat ttctattctt gtactcggtg cagataaagc acaaggtgga caatcaagaa
    14161 cagattctat catggttgtt caatatgact ttatcaataa aaagatgaaa atgatgtctg
    14221 tcatgcgtga tatttatgca gatattccag gatatggaaa acacaaaatt aattcagcat
    14281 acgctttagg tggtccagag ctacttagaa aaacacttga taaaaattta ggaattaatc
    14341 ctgaatatta tgcagtagtt gattttactg gatttgagaa aatgattgat gaattaatgc
    14401 cagaaggtgt accaattaat gtcgaaaaag atatgtcgaa aaatattggt gtatctttga
    14461 aaaagggtaa ccataggttg aatggtaaag aattacttgg ttatgcaaga ttccgtcacg
    14521 accctgaagg tgacttcgga cgcgtgcgac gtcagcaaca agtgatgcaa acattgaaaa
    14581 aagaaatggt taattttaga acagttgtta aattaccaaa agttgcaggt attttaagag
    14641 gctatgtgaa tacaaacatt cctgattcag ggatcttcca aacaggtttg agttttggta
    14701 tccgaggtga aaaagatgtt aagtcattga ctgtgccaat caagaactca tacgaagatg
    14761 tcaatacaaa tactgatggt agtgcattac agattaataa aaacacaaat aaacaagcta
    14821 ttaaagactt tttagatgaa gattaaaaat aaacaaggcg atttctatca tactcagata
    14881 gaagtcgcct tgttcgtttt caaagaatta tttggcatgc atcctatgaa gaattattga
    14941 tctgactttc ttacgccagc cacaccataa tggtttggtt tcatttcttc tataacaacg
    15001 tgaattgctt gtctatttgc tccagttgtt ttttctacgg cgtcagtaac ttcgctaact
    15061 aaatttttta attgttcatc cgaacgacct tctaataatt ttacattgac gattggcatc
    15121 atccaaacct cctaatcatt attaatttga gtatatcatg taatacttaa aaattcattt
    15181 gcaaaataac agaacacttg ttctaaaata gttgaaatag aacaagtgtt cgtatataat
    15241 agaattcaag taagggagga ataacagtgt ataattatca tttattagaa gatagggatg
    15301 ttctatgtat tgaccaaaaa agtttttttg cgagtgtttc ttgtattgaa aaggggctag
    15361 atccattaga aacaaagtta gctgttgttg cagatactaa gcgtcagggt tctgtagtat
    15421 tggctgcgac acctaaatta aaagaattag gcatcaagac aggatcgcga ttgtttgaaa
    15481 taccacatag aaatgatatt tacattatca atccaagtat gcgtaaatat cttaatgttt
    15541 cagttgctat ttctaagatt gcattgcgtt atattccacc tgaagattta caccaatata
    15601 gtattgacga attttttatg gatgttactg atagctatca tagatttagt tctacagtac
    15661 atgcattttg cgaaagactt aaacgtgaaa tttatgaaga aacaggcatt tattgtactg
    15721 tgggcattgg ttctaatatg ttattaagta aaattgctat ggatgttgaa gcgaagcata
    15781 atcaaaatgg tatagctgaa tggcgatacc aagatgtacc aacaaaatta tggccaattc
    15841 agcccttgcg agatttttgg ggtattaatc gtcgaacaga agccaaattg aataaaagag
    15901 gaatttttac tataggagat ttagcgaaat atccatataa atttttaaaa aaagagttcg
    15961 gtattttagg tgttgatatg catctacatg cgaatgggat agatcagagt aaagtacgtg
    16021 aaaagcataa gatcagcaat ccatcgatat gcaaaagtca aatattaatg agagattatc
    16081 attttgatga agcaaaagta gtaatgcaag agttaattga agatgttgct agcagagttc
    16141 gagcaagaaa aaaagtggca agaacgatac attttgcctt tggctatagt gatgaaggcg
    16201 gtgtacataa gcaatatact ttgaaagatc caacaaactt agaaaaagat atttataaag
    16261 tagtaatgca tttcgcagat aaattatgta ataaacaagc actatatcgt acgctaagta
    16321 tatctttgag tcaatttatt aatgaggatg agcgacagtt aagtctgttt gaagatgaat
    16381 accaacgcaa acgtgacgaa tgtctagcta aaacgataga ccaattacat ttgaaatacg
    16441 gcaaaggtat tgtgtccaaa gcagtatcgt ttacagaagc aggtacaaaa cacggcagat
    16501 taggtttaat ggctggacat aaaatgtaat gactataagg tttaagtaat atataactgt
    16561 gattcgtata aaataagtct ctaaagataa atatttcata tatcacaata gattttcaca
    16621 ataatatcta agaatacatg gaatttatca aaagagactt aataattatt ggatataaca
    16681 atcaaaatca ctcaatgctt gcataccgcg ttctcggtca gtaggatttt tgaaactaat
    16741 ttttaaagca ccgtatatat cttcgcgtac ttctaagatt cttaagttgc ttatagatat
    16801 attatgtaaa ctcaggatat aagtcacttt gcttatcata cctgattcat ccggaatatc
    16861 tacatataga tcatacgcag tatttagtcc acctagttgt ttagccggca gtgcgtcacg
    16921 atacgattta gcttcggcaa aaaatgataa caatttttca gaatcattgc tttctattag
    16981 tttttctaaa tcttgaaact gactttttag ttgtccaatc atttctaaaa tatacgtttt
    17041 attactcaag gtgatatctt tccacatttg tgcattacta ctagctatac gagtgatatc
    17101 acgaaaacca ccagctgcaa gtttattgac taaatgatgt tcttgaccgt tcttttgact
    17161 aacatgaact aaactagatg caacgatatg aggtaaatga cttacgacgc ttgttacgta
    17221 gtcgtgttct tcagcagtag ttataataaa tttagcaaga gtaggtgata acagttcttt
    17281 taacgtgttt gctgcttgct catttcttgg ctcattgtag actaaaatat aataagcgtt
    17341 ttcaaataag tgctttttag catttagtac accagattta tgactaccag ccattggatg
    17401 accactgact aaatgaatat tatgttttaa taaattgcat tcgtgttgct gtatcattgc
    17461 tttagtacta ccagtatcag aaacaataac accaggttta gttggcatat ctataagctc
    17521 gctaagatat ttatttgtga tagcaacagg tgttgcataa ataattacat cggctttttt
    17581 aatagcttca ctataattta aacatttttc attaataata ccgattgatt tagctttatc
    17641 taactgagaa gtatccgcat cgtatgcaat aatattagca ttagggttat agtattttat
    17701 attgctagca agacttccac caattaatcc aagcccaaca aataaaactg ttgtcatata
    17761 aatcacctta tttcgaaatt ttcagaataa taacattgta aatgagctgt tgacacagtg
    17821 caatagtaaa taaaaatcga taatagcatt aatagataaa cagatataaa tcatctacaa
    17881 taaagagtat agtaacacaa tggcaacgga ggggtaaatc aatggaacca atattagaaa
    17941 tgattaaaac attaacaggt attaatagtc cttcaggaga cacagaagaa gcaattcaat
    18001 ttgtcgaaaa atatgcaaaa gacttaggtt atcaaacaac actaacaaat aaaggtgcgt
    18061 tattaataac agtgccaggc aaaaatgatg aagtacaacg ctgtattact gctcatgttg
    18121 atactttagg tgcaatggtt aaagaaatta aagaagatgg acgcttagca atagaattaa
    18181 ttggaggatt cacgtataac gcgattgagg gtgaatattg ccaaattaaa actgatgctg
    18241 gccaaatata tacaggaacc atttgtctgc atgaaacaag tgttcatgta tatagaaata
    18301 atcatgaaat acctagagac caaaagcata tggaaataag aattgatgaa gtaactacat
    18361 cagaagaaga tacaaagagt ttaggtattt cagtaggtga ttttgttagc tttgatccac
    18421 gtacagttat cacgtcatca ggttttatta aatctcgtca tttagatgat aaagctagcg
    18481 tagcgatgat actacaatta ctaaagaaat taaaagaaga gcaaataata ttaccacata
    18541 caacgcaatt ttatatttct aataacgaag aaataggtta cggtgcaaat gcatcaattg
    18601 attcgaaaat caaagaatat attgcattag atatgggcgc gttgggagac ggtcaagcat
    18661 cggatgaata tacagtttct atttgtgcca aagatgcttc aggtccatat cataagcaat
    18721 tgaaatcaca cctagttaat ctttgcaaaa taaataatat tccatataaa gtagacatat
    18781 atccatatta tggttcagat gcttcagcag ctttacatgc tggtgcggat atcagacatg
    18841 gtttatttgg ggctggcatt gaatcatctc atgcaatgga acgaacacat attgattcta
    18901 ttaaagcgac agagaaatta ttatatgcat attgcttatc accaattgag taaacaatta
    18961 gtgttgacaa atgtgaacga cctatgtaat ataatgaact ataaaaataa ttagaatttt
    19021 ctaaagaaat agtagcagat atgaaacgta gcaaatagaa agctaatggg tgatgggaat
    19081 tagcacgcca tatcttgtga attggacttt ggaaaacaat tgaatgagtt ttgaaagtga
    19141 acatgaatta tgttaactaa ggtggcacca cggtaacgcg tccttacagg tatatgcgtt
    19201 atgtggtgtc tttttattta gacaaaatgt agtagttagt taaaggtagc aacagaaagt
    19261 tagtgggtga tgtgaactaa caccgagatt aatgaaattg ggttttgtct gcaacagaaa
    19321 attatatata gtaaagagtg aactatgaat atttcgaata ttcggttaat ttaggtggta
    19381 ccacgcgtca gcgtccttta tattgataag gatgctggcg tttttttaga aaggagcgta
    19441 aagaatggat gtattctata aaaaaataaa agcaaatgta acacctgaag ttttagcaca
    19501 acttcattcc aagaagatca ttttggaaag tacaaatcaa caacaaacta agggtcgcta
    19561 ttctatagtg atatttgaca tctacggtac tttaacttta gataacgatg tattatctgt
    19621 aagcacttta aaagagtcgt atcaaatcac tgaaagaccg tatcattatt taacgactaa
    19681 aataaatgaa gactatcata atattcaaga taatcaactt aagccattac cgtttatatc
    19741 tggatatgtt gggacgtgta gctttgattt agtaagacat gaatttccta aattgcaatc
    19801 aatacaatta gaggatcaca agcagcacga tgtacggtta tatatggttg aacaagttta
    19861 tgtatttgac cattacaaag atgagttata tatcatcgcg acgaatcaaa tttcaaattc
    19921 aacaaaatca gattttgaga atcgagttaa taagtctatc gaagacttaa ctaaaatcca
    19981 accattcatg cctacacaag attttgattt taaaactaaa gaaattcaat caaacatttc
    20041 tgaagaaagg tttatcgaaa tgatacagta tttcaaagag aaaatagcag aaggggatat
    20101 gttccaagtt gtgccgtcaa gaatttacaa atatgcgcat catgctaatc agcatttaaa
    20161 tcaacttacg tttcaactgt atcaaaattt aaaacgacaa aacccaagtc catatatgta
    20221 ttatcttaat atcgataaac cctatattgt cggtagttct cccgaaagtt tcgtaagtgt
    20281 caaagatcaa attgtaacaa ctaatcctat tgcaggtacg attcaacgtg gtgagacgac
    20341 aaaaatagat aatgagaata tgaaacaact acttaacgat cctaaagaat gtagtgaaca
    20401 tcgtatgctt gttgatttag ggcgtaatga tattcataga gtaagtaaaa tcggtacctc
    20461 aaaaattact aaattaatgg ttattgaaaa atatgaacat gttatgcata tcgtaagtga
    20521 agtcactggt aaaataaatc aaaatttatc gccaatgaca gttattgcga atttattacc
    20581 aacaggtacc gtttcaggtg caccaaaatt acgtgcaatc gaaagaattt atgaacaata
    20641 tccacataaa cgtggcgttt atagtggtgg tgttggatac ataaattgta atcataactt
    20701 agattttgca ttagcaattc gaacgatgat gatagatgag cagtatatca acgtagaagc
    20761 tggttgtgga gttgtatatg attctattcc tgaaaaagaa ctgaatgaaa cgaaattgaa
    20821 agctaaaagc ttattggagg tgagcccatg atcttagttg tagataatta tgattccttt
    20881 acgtataacc tagtggatat tgttgctcaa catactgacg tcattgttca atacccagat
    20941 gatgatggtg tgctgaatca atctgttgat gctgtcatta tttcaccagg tcctgggcat
    21001 ccattagacg accaacagtt aatgaaaatc atatcaacct accaagataa acccatttta
    21061 ggtatttgtt taggggctca ggcactgact tgttactacg gtggagaagt gattaaaggc
    21121 gacaaggtta tgcacggcaa agttgatact ataagtatca cttcaaatac tcacaaagtg
    21181 ttatatcacg atgtaccaga acagttctca attatgagat atcattcatt aataagtaac
    21241 cctgataatt ttccagaaga attgaaaatt actggacgta ccgaagattg tatacagtca
    21301 tttgagcata atgaacgacc gcattatggt attcagtacc atcctgaatc atttgctaca
    21361 gactatggtg tcaaaataat tacaaatttt attaaactag tgaagaaagg atgaaaacca
    21421 tgacattact aacaagaata aaaactgaaa ctatattact tgaaagcgac attaaagagc
    21481 taatcgatat acttatttct cctagtattg gaactgatat taaatacgaa ttacttagtt
    21541 cctattcgga gcgagaaatc caacaacaag aattaacata tattgtacgt agcttaatta
    21601 atacaatgta tccacatcaa ccatgttatg aaggggctat gtgtgtgtgc ggcacaggtg
    21661 gtgacaagtc aaatagtttc aacatttcaa caactgtagc ttttgttgta gcaagtgctg
    21721 gtgttaaagt cattaaacat ggtaataaaa gtattacctc aaattcaggt agtacggatt
    21781 tgttaaatca aatgaacata caaacaacaa ctgttgatga tacacctaac caattaaatg
    21841 aaaaagacct tgtattcatt ggtgcaactg aatcatatcc aatcatgaag tatatgcaac
    21901 cagttagaaa aatgattgga aagcctacaa tattaaacct tgtgggtcca ttaattaatc
    21961 catatcactt aacgtatcaa atggtaggcg tctttgatcc tacaaagtta aagttagttg
    22021 ctaaaacgat taaagattta ggcagaaaac gtgcaatcgt tttacatggt gcaaatggta
    22081 tggatgaagc aacactatct ggtgataatt tgatatatga attgactgaa gatggagaaa
    22141 tcaaaaatta cacattaaat gcgactgatt atggtttgaa acatgcgccg aatagcgatt
    22201 ttaaaggtgg ttcacctgaa gaaaatttag caatctccct taatatcttg aatggtaaag
    22261 atcagtcaag tcgacgtgat gttgtcttac taaatgcggg tttaagcctt tatgttgcag
    22321 agaaagtgga taccatcgca gaaggcatag aacttgcaac tacattgatt gataatggta
    22381 aagcattgaa aaaataccat caaatgagag gtgaataata tgacgatttt agcagaaatt
    22441 gttaaatata aacagtcact tttacaaaat ggctattatc aagacaaact taataccttg
    22501 aaaagtgtga atattcagaa taaaaaatct tttataaacg caattgagaa agaaccaaag
    22561 ctagcaatta ttgcagaaat caaatcgaag agtcctacag ttaatgactt acctgaacga
    22621 gatttatcgc aacaaatctc agattatgaa aagtatggtg caaatgccgt gtccatttta
    22681 actgatgaaa agtactttgg tggtagtttt gaaagattac aagcattgac aacaaaaaca
    22741 acattacccg tattatgcaa agattttatt atagatccgc ttcaaattga tgttgctaaa
    22801 caagcaggtg catctatgat tttattgatc gttaacatct tatcggataa acaattgaaa
    22861 gatttatata actacgctat atcgcaaaat ttagaagtgc tagttgaagt acatgatcgt
    22921 catgaattag aacgtgccta taaggttaat gctaaattga ttggtgtaaa taacagggac
    22981 ttaaaacgat ttgtcacaaa tgtggaacat acaaatacta ttttagaaaa taaaaaacca
    23041 aatcattatt atatttctga aagtggtatt cacgatgcat ctgatgtaaa aaaatcttgc
    23101 atagtggtat cgatggccta ctaataggtg aagcgcttat gcgttgtgac aatctatctg
    23161 aatttttacc acaactgaaa atgcaaaagg tgaaatcatg atgaaattga aattttgtgg
    23221 ctttacatca atcgaggatg ttacagcggc cagtcaatta cctattgatg cgataggttt
    23281 catccattat gaaaaaagta aaaggcatca aacaattacc caaataaaaa agttagcgtc
    23341 tgctgttcaa aatcatattg acaaagtatg tgtcgtggta aatcctgatt taacaactat
    23401 tgaacacgta ttaagcaata cgccaattaa cacaatacag ttacacggca cagaatctat
    23461 tgattttata caggaaatta aaaagaagta ttcaagcatt aagattacta aagctttagc
    23521 tgcagatgaa aacataatcc aaaacataaa taaatataaa gggttcgtag atttatttat
    23581 tatcgacaca ccctcagtgt cgtatggtgg taccggtcaa acatatgatt ggactatttt
    23641 gaagcacata aaagacatac cttactagat agcaggaggc attaactctg aaaatattca
    23701 aacagttaat caacttaaat tatcacatca aggttatgat cttgcatcag gtatagaagt
    23761 aaatgggcga aaagatatag aaaaaatgac agcaattgta aatattgtga aaggagatag
    23821 agaaaatgaa taaacaaata caaacagaag cagatgaatt aggtttcttt ggtgaatacg
    23881 gagggcaata tgttccagaa acattaatgc cagcaattat tgagttgaaa aaagcttata
    23941 aagaggcaaa agcagatcca gagtttcaaa gagaactgga atactattta tcagagtatg
    24001 taggacgcgc gacgccactt acatatgctg catcatatac tgaaagccta ggtggtgcta
    24061 aaatatattt aaaacgagag gatctaaatc atacaggcgc ccataaaatt aataatgcat
    24121 taggtcaagc gttgcttgct aaaagaatgg gcaagaagaa gcttgttgct gaaactggtg
    24181 cgggtcaaca tggtgtagct agtgctacgg ttgctgcatt atttgatatg gaacttgttg
    24241 tctttatggg aagtgaagat attaaaagac aacaacttaa tgtatttaga atggaattac
    24301 ttggtgcaaa ggttgtggca gttaaagatg gtcaagggac tttatcggat gcagttaata
    24361 aagcattgca atattgggta agtcatgtag atgacacaca ttatttatta ggttctgcat
    24421 taggtccaga cccattccca acgattgtta gagattttca gagtgtgatt ggtaaagaaa
    24481 taaaatcaca gatattgaag aaagaaggtc gacttccgga tgcaattgta gcatgtattg
    24541 gtggtggctc aaatgcaatc ggtacatttt atccatttat taaagatgat gttgcgttat
    24601 acggtgttga agccgcaggt caaggcgagg atactgataa acatgcactt gcaattggca
    24661 aaggatcacc tggcgtatta catggtacta aaatgtattt aattcaagat gaaggtgggc
    24721 aagtgcaact agcacattct atttcagcag gacttgatta tcctggtatt ggaccagaac
    24781 attcttatta ccacgacatt ggtagagtaa cttttgaaaa tgcaagtgat acacaagcaa
    24841 tgaatgcttt aatcaacttt acaaaacatg aaggtattat acctgcaatt gaaagtgcac
    24901 atgcactgag ttatgttgaa agactagcgc ctacgatgtc gaaagaagat attattgtag
    24961 taactatttc tggacgtggc gataaagata tggaaacaat tagacaatat atggcagagc
    25021 gaggtcttgc aaatgactaa attatttata ccttatatta tgggcaataa agatttgatt
    25081 gaaaatgcaa cattgttgag tgaaaatggt gcagatataa ttgaaattgg tgtacctttc
    25141 tctgatccgg ttgctgatgg tccagttatc atggaagcag gtcaacaagc gattaaacaa
    25201 ggcataacga tagattatat tttcgagcaa ttagaaaaac acggtaatca aattaagtgt
    25261 cagtatgtat taatgacgta ttataatatt atttgtcatt atggagaaca agcgtttttt
    25321 gaaaaatgtc gagataccgg tgtctacggc ttaattattc ctgatttacc atttgaatta
    25381 tcgcagcgtt taaaacaaca atttagtcac tatggtgtca aaatcatatc gttagttgcg
    25441 atgactactg atgacaaacg tataaaagat atcgtatcac atgcggaagg ctttatttat
    25501 actgtgacga tgaatgcgac aacaggacaa aacggtgcgt ttcacccaga attaaaacga
    25561 aaaattgagt caattaaagc gatagccaat gtgccagttg tcgcaggatt tggtataaga
    25621 actccacaac atgttgcaga tataaaagag gttgcagatg gtatcgttat tggtagtgaa
    25681 atagtaaaac gatttaaatc taacacgcgt gaagaaatca ttaaatattt acaatctatc
    25741 cagcaaacat tgaataatta agtttacttg atttaaaaaa attagtcgaa tactgtttga
    25801 aaaagtgaaa aacggtgaat tataaaattg aatagaaatg atacaaaagt aatatgagca
    25861 aacccaaacg ttcatattac tttttttgaa attgtatgca aaaatctaaa tattactata
    25921 aaagtatacg caattaaagc gtttatgttt tagttttaac attaactatt gtatacttat
    25981 ttagattaga tttattattt ttgacatttg cagaggggaa atagaaaaac tgcaaatacg
    26041 gaaatgaaat taattaacga gagacaaata ggagtaatga taatgaagtt tacaaattta
    26101 acagctaaag agtttggcgc ctttacagat agcatgccat acagtcattt cacgcaaact
    26161 gttggccact atgagttaaa gcttgctgaa ggttatgaaa cacatttagt gggaataaaa
    26221 aacaataata acgaggtcat tgcagcttgc ttacttactg ctgtacctgt tatgaaagtg
    26281 ttcaagtatt tttattcaaa tcgcggtcca gtgatcgatt atgaaaatca agaactcgta
    26341 cactttttct ttaatgaatt atcaaaatat gttaaaaaac atcgttgtct atacctacat
    26401 atcgatccgt atttaccata tcaatacttg aatcatgatg gcgagattac aggtaatgct
    26461 ggtaatgatt ggttctttga taaaatgagt aacttaggat ttgaacatac tggattccat
    26521 aaaggatttg atcctgtgct acaaattcgt tatcactcag tgttagattt aaaagataaa
    26581 acagcagatg acatcattaa aaatatggat ggacttagaa aaagaaacac gaaaaaagtt
    26641 aaaaagaatg gtgttaaagt aagatattta tctgaagaag aactaccaat ttttagatca
    26701 tttatggaag atacgtcaga atcaaaagct tttgctgatc gtgatgacaa gttttattac
    26761 aatcgcttaa aatattacaa agaccgtgtg ttagtgcctt tagcgtatat caattttgat
    26821 gaatatatta aagaactaaa tgaagagcgt gatattttaa ataaagattt aaataaagca
    26881 ttaaaggata ttgaaaaacg tcctgaaaac aaaaaagcgc ataacaaacg agataactta
    26941 caacaacaac ttgatgcaaa tgagcaaaag attgaagaag gtaaacgtct acaagaagaa
    27001 catggtaatg aactacctat ctctgctggt ttcttcttta tcaatccatt tgaagttgtt
    27061 tattatgctg gtggtacatc aaatgctttc cgccattttg ccggaagtta tgcagtgcaa
    27121 tgggaaatga ttaattatgc attaaatcat ggcattgacc gttataattt ctatggtgtt
    27181 agtggtaaat ttacagaaga tgctgaagat gctggtgtag ttaaattcaa aaaaggttac
    27241 aatgctgaaa ttattgaata tgttggtgac tttataaaac caattaataa acctgtttac
    27301 gcagcatata ccgcacttaa aaaagttaaa gacagaattt tttaggaagg gaattatcaa
    27361 aacatgaaat ttacagagtt aactgttacc gaatttgaca actttgtaca aaatccatca
    27421 ttggaaagtc attatttcca agtaaaagaa aatatagtta cccgtgagaa tgatggcttt
    27481 gaagtagttt tattaggtat taaagacgac aataacaaag taattgcagc aagccttttc
    27541 tctaaaattc ctactatggg aagttatgtt tactattcga atcgtggtcc agtaatggat
    27601 ttttcagatt taggattagt tgattattat ttaaaagagt tagataaata tttacagcaa
    27661 catcaatgtt tatatgttaa attagatccg tattggttat atcatctata tgataaagat
    27721 atcgtgccat ttgaaggtcg cgagaaaaat gatgccttag taaacttgtt taaatcgcat
    27781 ggttacgagc atcatggctt tacaactgag tatgatacat cgagccaagt acgatggatg
    27841 ggcgtattaa accttgaagg taaaacacct gaaacattga aaaagacatt tgatagtcaa
    27901 cgtaaacgta atattaataa agcgataaac tatggtgtta aagtcagatt ccttgaacgt
    27961 gatgagttca atcttttcct agatttatat cgtgaaactg aagagcgtgc tggatttgta
    28021 tcaaaaacag atgattattt ttataacttt attgacacat atggagataa agtattagta
    28081 ccattagcat atattgacct tgatgaatat gtgttaaagt tgcaacagga attgaatgac
    28141 aaagaaaatc gtcgtgatca aatgatggcg aaagaaaaca aatcagataa acaaatgaag
    28201 aaaattgcag aattagataa gcaaattgat catgatcagc atgaattatt gaatgctagt
    28261 gaattgagca aaacggacgg cccgattcta aaccttgctt ctggcgttta ttttgcaaat
    28321 gcatatgaag tgaattattt ctctgggggt tcatcagaaa aatataatca atttatggga
    28381 ccatacatga tgcattggtt tatgattaac tattgcttcg ataatggtta tgatcgttat
    28441 aatttctatg gtttatcagg tgattttacg gaaaacagtg aagattatgg cgtataccgc
    28501 tttaaacgtg gatttaatgt acaaatcgaa gaattaatag gggatttcta taaaccaatt
    28561 cataaagtga aatattggtt gttcacaaca ttggataaat tacgtaaaaa attaaagaaa
    28621 tagatgtaaa tgatgttagg gcttatagtt attgatacta taggctcttt tttatgcttt
    28681 ttaataaagc ctctaatgat atattaaatg acaagtttaa caagtgattg caataaatat
    28741 aaatatgcat tgcacaacct atttgtaaat gattgagttg agtatacgtt ttaattcatt
    28801 caatatgact caaaacaagt caaaatgtat tatatttttg gtgaataaac cttagcataa
    28861 caatttatgt ctgattataa atgtgtgtgt ttgcaagtgt gtgatatcaa atgtcatatt
    28921 tgtctaattg taatttataa aatgcatgag caatgattgc tgtaacaaat tctagcaaag
    28981 taatcagttt gtatattaga aataaataaa aatgatgata gatatattat cgatacaaag
    29041 atataatatg cagcaaaacg tgatgagtaa ttggtttaat gaaacataac atgaatgtaa
    29101 atttagcata ctgacataaa cactacacaa acatacagtt atataagtcc ccttatggaa
    29161 tttcacattc tagtttacat aatatatatt ataggaagtt aaatatctgt aacgcaaaag
    29221 gtaccctaca tcataatcat tatctaatat cgtcacataa cttacttatg ctataatcat
    29281 ggtattatat tgtttggagt gatttgatga gatttgtctt tgatattgac ggtacgcttt
    29341 gttttgacgg ccgattaatt gaccagacta ttatcgatac attgttacaa ttacaacatg
    29401 ctggtcatga acttatattt gcatcagcac gtccgattcg tgatttgttg ccagttttac
    29461 catcagtatt tcatcagcac acattaattg gcgcaaatgg tgctatgatt tcacagcaat
    29521 caaagatttc tgttatcaaa ccaattcata cagatacata tcatcatatc ttaaaaataa
    29581 ttcaaaagta tgagttagat tatattattg atgatgattg gaattatgct gcacaacttg
    29641 acgctgagaa cgctattttt gagcgtttag atccacataa gctggccagt tgtattgatg
    29701 ttgcaaatat cgacacgcca atcaagatta ttttattaaa tatagacgtg gcacaaatta
    29761 caactatatt agacgagcta aataaatgcc atcaagaatt ggaaatgatt caccattcaa
    29821 atgagtataa cattgatata acagcgcaaa atattaataa atatactgca ttacaatata
    29881 tatttgatgc agatgttaaa tatatagcat ttggtaatga ccacaatgat attgtcatgt
    29941 tacaacatgc tagtagtggc tatattatag gaccatcaga agcatacaca caagcaatat
    30001 tgaaacttga taaaatcaaa cacatcgata ataatgcaca agctatttgc aaagtcttaa
    30061 aatcatataa ataaaaacac ccctatcaaa tgataatcat tatcaatcga taggggctat
    30121 tttaataaaa ttcgtcctcg aacatttcat cctcttcatc taatccaaat aattctgcca
    30181 tttctccatg ttcaattaac atgtttaaat atgcatcgcg gagttcttct tcactcatat
    30241 cattaatcat ttctttaaga aaatcaatcc acatatttct gcgtaagtga tagtcttctt
    30301 caacttcgtt taacatgatt atatgtttat ttgctgcttc tggactagct gtaaagagta
    30361 atgcaatcat atgtttacat atcactcgtc ttccatcagc atgaggacaa ttacatttag
    30421 attttctagg atgttccata tcaatataac aacgataaac tttgttacca ctgcccttta
    30481 cttcagcctc atgctgcatt tctgaaaatg attttaagtt aatgacgcat tcactttgat
    30541 aataattaaa gcctctttct atagaacgaa tacttgcaat atcaagtaat cccattaatg
    30601 atactccttt ttattattat ttttaaataa agaaaataaa atcgataagt gtctagatta
    30661 atatacttga ttcatctata ttttataaca agtctagaat tatcgcattc ttaaatagct
    30721 aatatgaaaa tgtttgcact aattcttttg tataagggtg tctatcaaca ttaaataatt
    30781 cctctattgt aaaatcatcg actatcatgc catccttaag aacgataatt ctattgacta
    30841 agcgttgtaa cacggataaa tcatgagaaa taacaataaa atgatttaag ttcgtaatcg
    30901 tttgcgcttt taatatattg attacatttt gttcagctat aacatctaaa tttgaagtta
    30961 tctcatcaca tattaaaacg cgaggctgta ctaataacga acgcatgaca ttaaatcttt
    31021 gtaattgtcc gccgctcact tcgcttggta atttagtcaa taattgcgcg ttcaactcaa
    31081 aagtagataa atgttgtatt aataattgat cctgagcagc attatcagtt aggcctctgt
    31141 aataatataa cgcttctttt aatgaggtct caatcgtcca atcagggtta aagctagtta
    31201 aagggtgttg gaaaatcggt aacacagcat tgtcacttaa gtaaatttct cctttaacag
    31261 gtttaaataa gccaagaacc aatgaagcga gcgtactttt accacagcca ctttcgccta
    31321 aaataccaac attttctcca tcaggtatag aaatattgat atcttgtagc accatctgct
    31381 ttttattata accaaaagtc acatgtttta actcaatcat agtaatccct ctttaattgt
    31441 gttctatatt ttattaggtg ttcagtatac ggatgcaaat gctcatgctt gaaatgatta
    31501 atattacctt gttcaatgat ttgaccttct tttaaaacat taatgtactg acaatatttc
    31561 aatacatgac ttaagttatg tgtgataata aataatgttt gaccatgttc taatacaata
    31621 tgctgtaata aatccatcac ttgattaccg ttcaaagcat ccaatgatgc aactggttcg
    31681 tctgcaataa ttaatttagg ctccaacatg agaacgcttg ctatgtatac gcgttcaagt
    31741 aggcccccag aaagttggaa actatattta tttaatatat ctttgctttg taaattaacc
    31801 cacgacaaag ccttgtcaat tttggacaaa gcctcttctt tactactttt ataatgctta
    31861 cgataaatcg cagttaactg tttacctaat ttagtatggt cgttaaaact ttctgcataa
    31921 ttttgagaaa tatagccaat tgtatgacca taatatttac tcaatctact aacattttcg
    31981 ccatcaaatt ggtacgaatc atacgtgcag gttaaatcaa atggtaaata ttcaagtaag
    32041 gctttagcaa tcaaactttt tccagcaccg ctctctccaa tcagggcatt aatctgttga
    32101 ctaaaaattt tcaaatcaat ccctttaata agtgatttct cactagtatt ctttattgtt
    32161 aaattttgta tatcaatgag actcatcata ttcacctcgt tgtttcagca atctatctct
    32221 tagcgcatcg ccggttaaat taaaaattaa aatagttata gcaatgactg aagcaggtgc
    32281 aatcaacata attggatgag acgaaataaa atcacgacct tgttgcaaca tagcgcccca
    32341 ctctggtgtt ggcggttgtg cacctaaccc aataaatgat agtgaactta tatatagaat
    32401 gattttaccg aaatcaacga ccatcaaaac gataatagcc ggtataattt taggtgttaa
    32461 atgacatatt aatattgttc ttgtaggtac atgaaataat tgtgccattt ttatataagg
    32521 cttattcatt tcgctattaa ctatacttct agtcaacctt gtgtaattca tccattttat
    32581 tattgtaatt gaagtaacta aattccataa cgatggttgg aaaaagcttg ctaaagcaat
    32641 catgatgata aattctggaa tacttagacc aacatcaata aaccttaaca ctaatcgttc
    32701 aatccacccc tttttatatc cggcaaatag acctagtgta acacctatga caacgatagc
    32761 tattaatgtt aaaacagtaa caaacaatgt tgaacgtgca ccgataataa ttcgggtaaa
    32821 taaatctctc ccataatcat cagtccctaa taaatgcaac caactaatag gttcaaaagt
    32881 ttgtgataaa ttgactttgg ttgcattttc actactgaca aagaattgta gtacaatcat
    32941 cacaaatata aatgcgccga atacaaaaaa gataaggtta ttctttgaaa atattttatg
    33001 catgacggtc actactttct gatatcaatg gtgtattggt tttgtttttt ggatttccta
    33061 attgtaaacg ctgcttcgga tcaagtaata acgttaataa atcagcaatc gtattaataa
    33121 taacaacgaa gaagccaata aataacacgc atccttgaat aacaggataa tctcgagatt
    33181 taatactatc cattaataga taaccaatac caggtatatc aaataaattt tcaatcacta
    33241 cagtaccacc tattagacta ccaagtgaaa tccctaataa tgggataatc ggtaaaattg
    33301 ttggttttag taaatcatga attaaaatat aacgttcatt catacctcgt aatcttgatg
    33361 cttgtacgat attactttgc aataacgtca ataaattaga gcgcactaaa cgaatgatgt
    33421 atgcacacat acctaaagat agcgtgaata caggcaatac aaactgactt agtataacgc
    33481 tatctatatt cattaaattt gtgacaataa ataataaaat aataccgata aagaacgctg
    33541 gtaaactaat taatagtgtt gagatcactc taatcacttt gtcagataac ttatgaaatc
    33601 gtttggctgc tataatgctg agcggtatag atatgcataa cgacactact aatgttgaaa
    33661 aagatatgag tagtgttatg ggtgcatagt tgaataatat ctgtgttacc ggttcttttg
    33721 attcaaaact ttttcctaaa ttaaaatgta ataaatgatt catccaatgc caccactgta
    33781 ccaataaaga atcatttaat cccaatttat ctttggttgc atttatttgt tccgtcgaca
    33841 cttgtgctac atcaagatgt aatattttat caacaggatt gcctggtgat aatttcatta
    33901 aaatgaatgt aagtgtagaa ataacaaata aaacaactat catttgcatc agtctataca
    33961 acatagactt tattatgaac ataatagtcc ccctccttgt gtaagttact aacactttct
    34021 ttttac
//
LOCUS       DALMNS010000018        34022 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.018, whole genome shotgun sequence.
ACCESSION   DALMNS010000018 DALMNS010000000
VERSION     DALMNS010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 34022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34022
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.018"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(123..536)
                     /locus_tag="O6Y56_000699"
     CDS             complement(123..536)
                     /locus_tag="O6Y56_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol-disulfide oxidoreductase DCC family
                     protein"
                     /protein_id="HDB5573988.1"
                     /translation="MPIVYYDGNCIYCYNYVIWLIQHDLPRNYQFATLKGEVGQQFFE
                     QHPEAANKNSVILQKGDRIYFESQAIIQLITALPNRTKLLGVGLWLVPKPVRNFGYRM
                     FANNRNRMWKTTWHQPNDYEKSFFLDDNAKVKLTD"
     gene            complement(994..2367)
                     /locus_tag="O6Y56_000700"
     CDS             complement(994..2367)
                     /locus_tag="O6Y56_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HDB5573989.1"
                     /translation="MTAETNYFWLNCGYNRWNHNEPLVGQTALFESGAHFNPSQGFRA
                     FKKAKVGDQVIFYQVQTDTGLLGCGEIISVETGAQNKIRVQFRFNEQLKPLTADYLKR
                     SEALEFRMSNMKETLFNQITAEEFDLISGLGKGEIKIPRYFFLAETEEFEPGNQYTIY
                     THTYNGIKRNGYHFYTQLEEGDNIIFYNRTKNQSVVGIGEVSKHIHEKPPIPGRTNST
                     VIEVSYEKDITPITLSTLNKHPKLKNLYFLQENAKQAIASMSQAQYDAIIEMSDNNGL
                     KSPFEMVQKPDMLESEKEETLKPFILLVVDRKEEGLKAANDLLQKANANPVITTGHPD
                     FSEDMLYGKYLPNETGALYYREGFITQLMPKKDKSYLVIDNFNRIDTDIFQTYINVLE
                     GYEVTLPRYNKDGNMIKWSRQKDSFYYFNPNWHIVGITYDSLEEIKEKYSEQFLKYTR
                     IVKVKHD"
     gene            complement(3041..3271)
                     /locus_tag="O6Y56_000701"
     CDS             complement(3041..3271)
                     /locus_tag="O6Y56_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573990.1"
                     /translation="MKQFLYIALVCGVIAGLGAFLHIPQYPSMTIPRIVAILGIISAM
                     LTFKDKQISASLKFSALLINVLPLCGTFVASN"
     gene            complement(3302..4240)
                     /locus_tag="O6Y56_000702"
     CDS             complement(3302..4240)
                     /locus_tag="O6Y56_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001620169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I mannose-6-phosphate isomerase"
                     /protein_id="HDB5573991.1"
                     /translation="MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGT
                     SEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYE
                     HENGQYGKSECWYIIDAEEDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEF
                     YFIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNA
                     SLPNILPESEIIENHKCTHIVSNDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMI
                     VDGEIFKLTTGTNFILTSEDLDSVFEGDFTLMISYV"
     gene            complement(4676..5341)
                     /locus_tag="O6Y56_000703"
     CDS             complement(4676..5341)
                     /locus_tag="O6Y56_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDB5573992.1"
                     /translation="MNILVIGANGGVGSLLVQQLAKENVPFTAGVRQSDKLNALKSQG
                     MKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKE
                     ANIKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAA
                     GSGKIEAAQYFEGKGEIPREDVATVLKEIVTSNHFNHQEFQIISGEQDIKDALTQFEI
                     EKD"
     gene            5493..5813
                     /gene="czrA"
                     /locus_tag="O6Y56_000704"
     CDS             5493..5813
                     /gene="czrA"
                     /locus_tag="O6Y56_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(II)-responsive metalloregulatory
                     transcriptional repressor CzrA"
                     /protein_id="HDB5573993.1"
                     /translation="MTEQYSEINTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGH
                     ISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPK
                     ESGL"
     gene            5815..6792
                     /gene="czrB"
                     /locus_tag="O6Y56_000705"
     CDS             5815..6792
                     /gene="czrB"
                     /locus_tag="O6Y56_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family zinc efflux transporter CzrB"
                     /protein_id="HDB5573994.1"
                     /translation="MSHSHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLAN
                     SLALLSDGIHMFSDTFSLGVALIAFIYAEKNATATKTFGYKRFEVLAALFNGVTLFVI
                     SILIVFEAIKRFFVPSEVQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFL
                     HVIGDLLGSVGAITAAILIWAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGT
                     PSDVDIDEVITTIKKDSRIQSVHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLEN
                     IEHDLLHLNIHHMTIQLETPNHKHDESMICSGTHSHSHNHHAHHHAHVH"
     gene            7058..8149
                     /locus_tag="O6Y56_000706"
     CDS             7058..8149
                     /locus_tag="O6Y56_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDB5573995.1"
                     /translation="MFTYFKSALKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKY
                     VQTIAIYSQFGQKPPGDAYLKVIAVLLIAAVVSLFVLVQIFIGITNVMKRAMSHEKVK
                     FTDLFIAFKKGIYLKSVLIGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNSVQSSYAD
                     STHLIGIAITTQSIIIIVVLLIKAIITWLLLIPVFNFMTSFVESTNDKVKTHLANGFK
                     AMKNGQKTFFKFFIGILLLNLIIILFKTPVGYLISFNTQSLSQSVAENIIRVYTVMTI
                     ILFVVIHAIILMGIVQYYLKRGQKITKDKVKPADKDKKVVTEPKNTKVETDKVTTSVE
                     TKTEKAQDSLNDNTTKTMTSDKPEDNQPK"
     gene            complement(8598..8702)
                     /locus_tag="O6Y56_000707"
     CDS             complement(8598..8702)
                     /locus_tag="O6Y56_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573996.1"
                     /translation="MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK"
     gene            complement(8863..9346)
                     /locus_tag="O6Y56_000708"
                     /pseudo
     CDS             complement(8863..9346)
                     /locus_tag="O6Y56_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837446.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            complement(9389..10525)
                     /locus_tag="O6Y56_000709"
                     /pseudo
     CDS             complement(9389..10525)
                     /locus_tag="O6Y56_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500870.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SAP domain-containing protein"
     gene            10814..10906
                     /locus_tag="O6Y56_000710"
     CDS             10814..10906
                     /locus_tag="O6Y56_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5573997.1"
                     /translation="MFIFKTTSKSHFHNNVKSLECIKITINKNR"
     gene            complement(11601..12458)
                     /locus_tag="O6Y56_000711"
     CDS             complement(11601..12458)
                     /locus_tag="O6Y56_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDB5573998.1"
                     /translation="MDNVKAIFLDMDGTILHENNQASTYTKDVINQLREKGYKVFLAT
                     GRSHSEIHQLVPQDFAVNGIISSNGTIGEVDGHTIFKHGLSLTQVKQIVDLAKQQHIY
                     YEVFPFEGNRVALKEDETWMREMIHSQDPINGVSHSEWSSRQDALAGKIKWVSDFPEG
                     EYSKIYLFSSNLEKITTFRDELKQNQVQLHISVSNSSRFNAETMAYQTDKGTGIKEMI
                     EHFGIRQDETLVIGDSDNDRAMFEFGHYTVAMKNARPEIQALTSDVTTYTNEEDGAAK
                     YLAEHFLAD"
     gene            complement(12526..13308)
                     /locus_tag="O6Y56_000712"
     CDS             complement(12526..13308)
                     /locus_tag="O6Y56_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5573999.1"
                     /translation="MLIQLDQVGRMKQGKTILKNISWQINGGDKWILYGLNGAGKTTL
                     LNILNAYEPATTGDVNLFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVI
                     SGAFKSIGVYQDIDDEVRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARSLIGQ
                     PQVLILDEPVAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIEEITGNFTKILLLK
                     DGESVQQGLIDDILTSENMSRFFQKNVAVQRWNNRFSMAMLE"
     gene            complement(13540..15345)
                     /gene="glmS"
                     /locus_tag="O6Y56_000713"
     CDS             complement(13540..15345)
                     /gene="glmS"
                     /locus_tag="O6Y56_000713"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDB5574000.1"
                     /translation="MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTV
                     FKEKGRIAELRKVADSSDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGV
                     IENYEELKGEYLQGVSFISETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALG
                     LLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKD
                     EVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEG
                     NLKIDQDIINDVKAADRIYVIAAGTSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMP
                     LLSEKPLFVYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAG
                     PEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLLRELAKVTTAIEAIVDDAPIM
                     EQIATDFLETTRNAFFIGRTIDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIE
                     EGTPVVGLATQEKVNLSIRGNVKEVVARGAHPCIISMEGLEKEGDTYVIPHVHELLTP
                     LVSVVTLQLISYYAALHRDLDVDKPRNLAKSVTVE"
     gene            16026..17576
                     /locus_tag="O6Y56_000714"
     CDS             16026..17576
                     /locus_tag="O6Y56_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICB"
                     /protein_id="HDB5574001.1"
                     /translation="MSQTEEKKGIGRRVQAFGSFLSSMIMPNIGAFIAWGFIAAIFID
                     NGWLPNKDLATLAGPMITYLIPLLIAFSGGRLIYDLRGGIIAATATMGVIVALPDTPM
                     LLGAMIMGPLVGWLMKKTDQLIQPRTPQGFEMLFNNFSAGILGFIMTIAGFKILAPLM
                     KFIMHILSVAVEALVHAHLLPLVSILVEPAKIVFLNNAINHGVFTPLGADQAAKAGQS
                     ILYTIESNPGPGLGILLAYMIFGKGTAKATSYGAGIIHFFGGIHEIYFPYVLMRPLLF
                     IAVILGGMTGVATYQATGFGFKSPASPGSFIVYCLNAPRGEFLHMLLGVFLAALVSFV
                     VAALIMKFTKEPKQDLEAATAQMETTKGKKSSVASKLVSSDKDAKVEENVNTEAKTNA
                     DESSTLEDDPEALLDNYNTEDVDAHNYNNINHVIFACDAGMGSSAMGASMLRNKFKKA
                     GINDITVTNTAINQLPKDAQLVITQKKLTDRAIKQTPNAIHISVDNFLNSPRYEELLN
                     NLKKDDQA"
     gene            17611..19743
                     /locus_tag="O6Y56_000715"
     CDS             17611..19743
                     /locus_tag="O6Y56_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HDB5574002.1"
                     /translation="MLLSTREKEMIALLIKYHGQYITIHDIAQQLAVSSRTIHRELKG
                     VEAYLTSFSLTLERANKKGLRIAGADSDLNDLKQSIAQHQTIDLSVEEQKVIIIYALI
                     QAKEPVKQYSLAQEIGVSVQTLAKMLDDLELDLNKYQLSLSRKRGEGIYLVGTESKKR
                     EFLSQLMVNNLNSTSVYSVIENHFVFHSLNQIHKDFVDLERIFNVERLLMDYLSALPY
                     QLTESSYLTLTVHIVLSISRIKNGEYVALNDDIYDSVQNTFEHKVASELADKLGQIYD
                     VTFNQAEIAFITIHLRGAKRKNLNDTSLNNRCEENKIKAFVKKVEMISGMTFADLDTL
                     VDGLTLHLNPAINRLQANIETYNPLTDMIKFKYPRLFENVRLALNDCWPDLIFPESEI
                     AFIVLHFGGSIKNQGNRFLNILVVCSSGMGTSRLLSTRLEQVFSEIERITQASVSDLK
                     SLDLSQYDGIISTVNLDIDSPYLTVNPLLPDSDISYVAQFLNTKSTFQETHDKSSNMI
                     DKDDVHVETKDIDGNTSFENEQTSYLTSLFEKHLSDEKSEQLMHHMRSGLTLLDSVKI
                     VSTEVKQWQTYIADYLYQCDVINNPTSFAELLEQRLIDNPGWILSPYPVAIPHLRDNM
                     IKHPMILITVLEEPLTLPSIQNDNQTIKYMISMFIPDNDFMASLVSDLSEFLSLKLES
                     IDTFMENPQELETLLRNKFLERIKKQFI"
     gene            19755..20189
                     /locus_tag="O6Y56_000716"
     CDS             19755..20189
                     /locus_tag="O6Y56_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDB5574003.1"
                     /translation="MSELFSNDNIFLNVNVNSQNEAIEKAGKALVDSGAVTDAYIQAM
                     KDREQVVSTFMGNGLAIPHGTDEAKTNVIHSGLTLLQIPEGVDWDGEVVKVVVGIAGK
                     DGEHLDLLSKIAITFSEEENVDRIVQAKSAEEIKQVFEEADA"
     gene            20189..21295
                     /locus_tag="O6Y56_000717"
     CDS             20189..21295
                     /locus_tag="O6Y56_000717"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HDB5574004.1"
                     /translation="MKAVHFGAGNIGRGFIGYILADNNVKVTFADVNEEIINALATDH
                     QYDVILADESKTTTRVNNVDAINSMQPSEALKQAILEADIITTAVGVNILPIIAKSFA
                     PFLKEKTNHVNIVACENAIMATDTLKKAVLDITGPLGNNIHFANSAVDRIVPLQKNEN
                     ILDVMVEPFYEWVVEKDAWYGPELNHIKYVDDLTPYIERKLLTVNTGHAYLAYAGKFA
                     GKATVLDAVKDSSIEAGLRRVLAETSQYITNEFDFTEAEQAGYVEKIIDRFNNSYLSD
                     EVTRVGRGTLRKIGPKDRIIKPLTYLYNKDLERTGLLNTAALLLKYDDTADQETVEKN
                     NYIKEHGLKAFLSEYAKVDDGLADEIIEAYNSLS"
     gene            complement(21614..29047)
                     /locus_tag="O6Y56_000718"
     CDS             complement(21614..29047)
                     /locus_tag="O6Y56_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
                     /protein_id="HDB5574005.1"
                     /translation="MNLFRQQKFSIRKFNVGIFSALIATVTFISTNPTTASAAEQNQP
                     AQNQPAQPADANTQPNANAGAQANPTAQPATPANQGQPAAQPASQGGQANPAGGAAQP
                     NTQPAGQGNQADPNNAAQAQPGNQAAPANQAGQGNNQATPNNNATPANQTQPANAPAA
                     AQPAAPVAANAQTQDPNASNTGEGSINTTLTFDDPAISTDENRQDPIVTVTDKVNGYS
                     LINNGKIGFVNSELRRSDMFDKNNPQNYQARGNVAALGRVNANDSTDHGNFNGISKTV
                     NVKPDSELIINFTTMQTNSKQGATNLVIKDAKKNTELATVNVAKTGTAHLFKVPTDAD
                     RLDLQFIPDNTAVADASRITTNKDGYKYYSFIDNVGLFSGSHLYVKNRDLAPKATNNK
                     EFTINTEIGNNGNFGASLKADQFKYEVTLPQGVTYVNDSLTTTFPNGNEDSTVLKNMT
                     VNYDQNANKVTFTSQGVTTARGTHTKEVLFPDKSLKLSYKVNVANIDTPKNIDFNEKL
                     TYRTASDVVINNAQPEVTLTADPFSVAVEMNKDALQQQVNSQVDNSHYTTASIAEYNK
                     LKQQADTILNEDANHVETANRASQADIDGLVTKLQAALIDNQAAIAELDAKAQEKVTA
                     AQQSKKVTQDEVAALVTKINNDKNNAIAEINKQTTAQGVTTEKDNGIAVLEQDVITPT
                     VKPQAKQDIIQAVTTRKQQIKKSNASLQDEKDVANDKIGKIETKAIKDIDAATTNAQV
                     EAIKTKAINDINQTAPATTAKAAALEEFDEVVQAQIDQAPLNPDTTNEEVAEAIGRIN
                     AAKVSGVKAIEATTTAQDLERVKNEEISKIENITDSTQTKMDAYNEVKQAATARKAQN
                     ATVSNATNEEVAEADAAVDAAQKQGLHDIQVVKSKQDVADTKSKVLDKINAIQTQAKV
                     KPAADTEVENAYNTRKQEIQNSNASTTEEKQAAYTELDTKKQEARTNLDAANTNSDVT
                     TAKDNGIAAINQVQAATTKKSDAKAEIAQKASERKTAIEAMNDSTTEEQQAAKDKVDQ
                     AVVTANTDIDNAAANTDVDNAKTTNEATIAAITPDANVKPTAKQAITDKVQAQETAID
                     ANNGATTEEKAAAKQQVQTEKTTADAAIDGAHSNAEVEAAKNAEIAKIEAIQPATTTK
                     DDAKQAITTKANERKTVIAQTQDITAEEIAAANANVDNAVTQANSNIEAANSQNDVDQ
                     AKTTGETSIDQVTPTVNKKATARNEITTILNNKLQAIQATPDATNEEKQAADAEANTE
                     NGKAIQAIAAATTNADVDEAKANAEAAINAVTPKVVKKQAAKDEIDQLQVAQTSVINN
                     DQNATNEEKEAAIQQLATAVTDAKNNITAATDDNGVDQAKDAGKNSIQSTQPATAVKS
                     NAKNDVDQAVTTQNQAIDNTTDATTEEKNAAKDLVLKAKEKAYQDILNAQTTNDVTQI
                     KDKAVADVQGITADTTIKDVAKDELATKANEQKALIAQTADATTEEKEQANQQVDAQL
                     TQGNQNIENAQSIDDVNTAKDNAIQAIDPIQASTDVKRNARAELLTEMQNKITEILND
                     NTTTNEEKGKDIEPVRAAYEEGLNNINTANTTGDVTTAKDTAVQKVQQLHANPVKKPA
                     GKKELDQAAADRKTQIEQTPNASQQEINDAKQEVDTELNQAKTNVDQSSTNDYVDNAV
                     KEGKARINAVKTFSEYKKDALAKIADAYNAKVNEADNSNASTSSEIAEAKQKLSELKQ
                     TADQNVNQATSKDDIEVQIHTDLDNINDYTIPTGKKETATTDLYAYADQKKNNISADT
                     NATQDEKQQAIKQVDQNVQTALESINNGVDNGDVDDALTQGKAAIDAIQVDATVKPKA
                     NQAIEAKAEDTKESIDHSDQLTAEEKTEALAMIKQIKDQAKQGITDATTTAEVEKAKA
                     QGLEAFDNIQIDSTEKQKAIEELETALDQIEAGVNVDADATTEEKEAFTNALEDILSK
                     ATEDISDQTTNAEIATVKNSALEQLKAQRINPVVKKNALEAIREVVNKQIEIIKNADA
                     DASAKEIARTDLGRYFDRFADKLDKTQTNTEVAELQNVTIPAIEAIVPQNDPNANDTN
                     SGSDNNDATANSNANATPENTGQPNVTESTDNGKADASPTTPNNSDPATGETTATDDA
                     NNKPTANNNSSVDESADNSATGNGTTDKPEVESTNNGTTDKPATETDNATPAESTTNN
                     NSTTATNENAPTGSTATAPTTNASTGAASSADSKDNASVNDSKQNAEVNNSAESQSTN
                     GKVAQPKSENKAKAEKDGRDSTNQSMVESTAETLPSADITEPKVSSNTSKDKKESTTN
                     QTGAGQLKSETNVASNEADKSEGNVDTEVSNKPSISKPSEAKDKATSTEDSQKADMST
                     ADTKDNQASIGATADVNNKATQNDGANASPATVSKGSNSANQGMLKVTNTDKHQAKVT
                     SAQQGKVNKPKQQAKTLPDTGMSHNDDLPYAELALGAGMAFLIRRFTKKDQQTEE"
     gene            complement(29324..30679)
                     /locus_tag="O6Y56_000719"
     CDS             complement(29324..30679)
                     /locus_tag="O6Y56_000719"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDB5574006.1"
                     /translation="MGKYFGTDGVRGVANQELTPELAFKLGRYGGYVLAHNKGEKHPR
                     VLVGRDTRVSGEMLESALIAGLISIGAEVMRLGIISTPGVAYLTRDMGAELGVMISAS
                     HNPVADNGIKFFGSDGFKLSDEQENEIEALLDQENPELPRPVGNDIVHYSDYFEGAQK
                     YLSYLKSTVDVNFEGLKIVLDGANGSTSSLAPFLFGDLEADTETIGCSPDGYNINEKC
                     GSTHPEKLAEKVVETESDFGLAFDGDGDRIIAVDENGQIVDGDQIMFIIGQEMHKNQE
                     LNNDMIVSTVMSNLGFYKALEQEGIKSNKTKVGDRYVVEEMRRGNYNLGGEQSGHIVM
                     MDYNTTGDGLLTGIQLASVIKMTGKSLSELAGQMKKYPQSLINVRVTDKYRVEENVDV
                     KEVMTKVEVEMNGEGRILVRPSGTEPLVRVMVEAATDEDAERFAQQIADVVQDKMGLD
                     K"
     gene            complement(30706..31638)
                     /locus_tag="O6Y56_000720"
     CDS             complement(30706..31638)
                     /locus_tag="O6Y56_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbbR-like domain-containing protein"
                     /protein_id="HDB5574007.1"
                     /translation="MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTI
                     QDVPVEILYNTKDLHLTKAPETVNVTISGPQSKIIKIENPEDLRVVIDLSNAKAGKYQ
                     EKYQVKGLADDIHYSVKPKLANITLENKVTKKMTVQPDVSQSDIDPLFKITKQEVSPQ
                     TVKVTGGEEQLNDIAYLKATFKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNL
                     QVKVEPFSKKVKVNVKQKGSLADDKELSSIDLEDKEIEIFGSRDDLQNISEVDAEVDL
                     DGISESTEKTVKINLPEHVTKAQPSETKAYINVK"
     gene            complement(31640..32449)
                     /locus_tag="O6Y56_000721"
     CDS             complement(31640..32449)
                     /locus_tag="O6Y56_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00159 family protein"
                     /protein_id="HDB5574008.1"
                     /translation="MDFSNFFQNLSTLKIVTSILDLLIVWYVLYLLITVFKGTKAIQL
                     LKGILVIVIGQQISMILNLTATSKLFDIVIQWGVLALIVIFQPEIRRALEQLGRGSFL
                     KRYTSNTYSKDEEKLIQSVSKAVQYMAKRRIGALIVFEKETGLQDYIETGIAMDSNIS
                     QELLINVFIPNTPLHDGAMIIQGTKIAAAASYLPLSDSPKISKSLGTRHRAAVGISEV
                     SDAFTVIVSEETGDISVTFDGKLRRDISNEIFEELLAEHWFGTRFQKKGVK"
     gene            complement(32634..33542)
                     /gene="rocF"
                     /locus_tag="O6Y56_000722"
     CDS             complement(32634..33542)
                     /gene="rocF"
                     /locus_tag="O6Y56_000722"
                     /EC_number="3.5.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginase"
                     /protein_id="HDB5574009.1"
                     /translation="MTKTKAIDIIGAPSTFGQRKLGVDLGPTAIRYAGLISRLKQLDL
                     DVYDKGDIKVPAVNIEKFHSEQKGLRNYDEIIDVNQKLNKEVSASIENNRFPLVLGGD
                     HSIAVGSVSAISKHYNNLGVIWYDAHGDLNIPEESPSGNIHGMPLRILTGEGPKELLE
                     LNSNVIKPENIVLIGMRDLDKGERQFIKDHNIKTFTMSDIDKLGIKEVIENTIEYLKS
                     RNVDGVHLSLDVDALDPLETPGTGTRVLGGLSYRESHFALELLHQSHLISSMDLVEVN
                     PLIDSNNHTAEQAVSLVGTFFGETLL"
     gene            complement(33679..33751)
                     /locus_tag="O6Y56_000723"
     tRNA            complement(33679..33751)
                     /locus_tag="O6Y56_000723"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33716..33718),aa:Lys,seq:ttt)
     gene            complement(33755..33829)
                     /locus_tag="O6Y56_000724"
     tRNA            complement(33755..33829)
                     /locus_tag="O6Y56_000724"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33795..33797),aa:Gln,seq:ttg)
     gene            complement(33839..33922)
                     /locus_tag="O6Y56_000725"
     tRNA            complement(33839..33922)
                     /locus_tag="O6Y56_000725"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33886..33888),aa:Tyr,seq:gta)
BASE COUNT        10256 a         6090 c         5064 g        12612 t
ORIGIN      
        1 aagtgttttt actctctttt ttataattat tataatctaa ttgcaaagtg tttcgctttt
       61 caaatgccta aattttaatc catcatctag tatatctatt atcaattagt aagtatgttt
      121 tatcaatcag taagttttac tttcgcatta tcatctaaaa agaacgattt ttcataatca
      181 tttggttggt gccatgttgt tttccacatt ctatttctat tattagcaaa cattcgataa
      241 ccgaaattac ggactggttt aggtacaagc cataaaccta cgcccaataa tttagttcga
      301 ttaggtagtg ctgtgattag ttgaataatc gcctgcgatt caaaatatat acgatcacct
      361 ttctgtaaaa tcacactatt tttatttgcc gcttctggat gttgttcaaa aaattgttgt
      421 ccaacttcgc cttttaacgt ggcaaattgg taatttcttg gtaggtcatg ttgaattaac
      481 caaatgacat agttataaca atatatacag tttccatcat aatatacgat tggcataatt
      541 tattcgctcc ttcaatagta cttatagtca tttttcctaa tttaaaaaca tttaaacaag
      601 gttgtcactt gataagtcct cacgacacga aattgccata aaatttattt ttcagtttta
      661 catttattgt ataatgtatt ttttatttac tttaaatttc tcaatctaca gtgtaatatt
      721 acttcttatt atcaacttag cgtttagtcg ttcgtcttat tcaacatacc actggaaaac
      781 tcatataaag ttttaattca gtaacataaa ttcatttata ttcatatact atctttatta
      841 tttattaaaa taaaaacgag taatctatca taagctctta attagctctt atggttgatt
      901 acccgtcatt ttttctttat acggttattc aaatatgcaa ttatgcaatt tttaatctta
      961 tacttacttc ttttcaaaaa ctaccatata tcattagtca tgtttgactt tgactatacg
     1021 tgtgtatttt aaaaactgct ctgaatattt ctccttaatt tcctctaaac tgtcatatgt
     1081 aatacctaca atatgccaat taggattgaa ataatagaaa gaatcttttt gtcgtgacca
     1141 tttaatcata ttaccgtctt tattataacg tggtaatgtt acttcatagc cttctaacac
     1201 attaatatac gtttggaaaa tgtctgtatc tatacgatta aaattatcaa taactaaata
     1261 acttttatcc tttttaggca ttaattgagt aataaatcct tcacgatagt ataatgcccc
     1321 tgtttcattt ggtaaatact tgccataaag catatcttct gaaaaatcag gatgacctgt
     1381 tgttataaca ggatttgcat tcgctttttg caataagtca ttagccgctt ttaagccttc
     1441 ttcttttcga tctacaacaa gtaaaataaa tggctttaac gtttcttctt tttcactttc
     1501 aagcatatct ggtttttgaa ccatttcaaa tggagatttc aatccattat tatcgctcat
     1561 ttcaataatt gcatcatact gtgcttgtga catacttgca atagcctgtt ttgcattttc
     1621 ttgaaggaaa tataagtttt tcaatttagg atgcttattt aatgtactta atgtaatcgg
     1681 cgtaatgtct ttctcataag acacttcaat cactgtacta tttgttctac caggaattgg
     1741 tggtttttca tgaatatgct ttgatacttc tccaattcca acgacagatt gatttttcgt
     1801 tcgattataa aaaataatat tgtcgccttc ttctaactga gtataaaaat gataaccatt
     1861 acgtttaata ccgttgtacg tgtgcgtata aatcgtatat tggtttccag gttcaaattc
     1921 ttcagtttca gctaaaaaga aataacgtgg tatcttaatt tcgcctttac caagaccact
     1981 tattaaatca aactcttctg cagtgatttg gttgaacaat gtctctttca tattactcat
     2041 acgaaattcc aaagcttcac tacgctttaa ataatctgct gttaatggtt tcaattgttc
     2101 attaaaacga aactgtacac gtattttatt ttgtgcacct gtttcaacac taataatttc
     2161 accacatcca agtagtcccg tatccgtctg aacttgataa aagatgactt gatctcctac
     2221 tttagccttt ttaaacgctc taaatccttg agatgggtta aaatgtgcgc ctgattcaaa
     2281 taaagctgtt tgtcctacta acggttcatt atgattccaa cggttatatc cacaattcaa
     2341 ccaaaaataa ttcgtttctg ctgtcatctt aatactcctt aacctgaata aattttagaa
     2401 acactatgaa ttacattctt ttattgtttc ttatgcagtt gggcgcgtat gcgatcaact
     2461 gtatcccctt tgttcactgc gattttaatc gcatttccta taacattgta gcgcctagga
     2521 cattaattta cgtcccagac ccttatcgtt ttcacttcta agtaagtcga actattttgc
     2581 tttacaacaa gtgcgactct aaatacagtt ggacacacac atacgagcaa ctgtatacct
     2641 tttaatcagt tttctatatt ttatttatta tatctgtctt aatgataaaa attgttacaa
     2701 acagtttaac atatttagct acctattttg catataaaaa acatgcttgc atacactatg
     2761 caataaaaat tacaaattta tatatgatac cactatgctt gcttatctct atagcgccat
     2821 tgatacacat ttttaaatat ctatactgcc gttagaattt tatcatgtct taattttcat
     2881 taaatattaa ttacttcatt ttatataaac caacaaaaac cccctcacta ctatgcaagt
     2941 gagaggttat gttgatgtgc tttattttca tcaatgtcat taacacaatc atatttcttc
     3001 tgttaatgca ctgtactata ttcaaacgcg ctatcgacaa ttaatttgaa gctacaaagg
     3061 taccgcataa tggcagcaca ttaattaaca atgcgctaaa ctttaatgag gcgctgattt
     3121 gcttgtcttt aaaagtcaac atagcactga taattcctaa aatagccact atacgtggaa
     3181 ttgtcatact cggatactgc ggtatatgta agaaagcacc aagacctgct atcacaccac
     3241 atactaacgc aatatataga aattgcttca aatcatccac tcctaaattg ttattacact
     3301 attacacata gctaatcatc aatgtgaaat caccttcaaa gacactatcc aaatcttcag
     3361 aagtcaaaat aaagtttgta ccagtagtca gtttgaaaat ttcaccatcg acaatcattt
     3421 gcccttcacc ttccaacact gtaactaaac agaactctct aggcttcata taatttaacg
     3481 tgccagaaat ttcccattta accaatgtaa agaaatcatt cgatacaatg tgtgtacact
     3541 tatggttttc aataatttca ctttcaggca aaatattagg taatgatgca ttgtactgaa
     3601 taacgtctaa agctttttca atatttaacg gtctatcatt atattgatta tcttgacgat
     3661 tgaaatcata aagtctatat gtaatgtctg acgattgcat cgtttcgtat gctaatattc
     3721 ctgaagaaat agtatgtact gttcctgctg gaataaaata gaattctcca ggttttactt
     3781 taatatatct aagtatggac tctatcgttc cgtgttgaac atgattcgca acttcttctc
     3841 tagactctgc taatgtccct ataactattt ctgcatcttc ttctgcatct ataatatacc
     3901 aacattcaga tttgccatat tgcccatttt catgctcata agcataagaa ttatcagggt
     3961 gcacatgaat agaaagtgat tctcttgcat ccactatttt agttagaagc ggaaaatctt
     4021 tgcttgggaa atcaccaaac aattcacgat gttctgacca aatacggtct aatgtttgac
     4081 cttgatatgg tccattaata atctcgctcg taccatttgg atgtgctgac acacaccaac
     4141 attccccagt tgtatcattg tctaattgat atccaaactc acttagacgt tgaccgcccc
     4201 ataattttgt ttttaaaatt ggttgtaaaa ataatggcat tgttgcacct ccattgtgat
     4261 taagtaagca atagaactct gatgttgttg ttccattata ttttgatttt gttctcattt
     4321 acatcgtatt ataaacttcc acatttcaaa ttaactatta gtgattgtac catatttagt
     4381 aacattgcag tactgccaat taaagcgctt cacttaaatt tacagtactt taacattttt
     4441 taaaatttat agcatagaga ttatatctct cttacatttg tacatatttc cctttaaatt
     4501 tactcgccca ttataccaat taataaacaa ctttaatagt tgtgccatac attgttcaaa
     4561 ttctttgtaa aacgcataga caatacgtgc ttattcatac ttataattca tcattttcaa
     4621 aaaaataacg agttacgaaa aagtaacccg cttcaaatca tatttactat ccttattaat
     4681 ccttttcaat ttcaaattga gttaaagcat ctttaatgtc ctgctcacca ctaataattt
     4741 gaaactcttg gtgattaaaa tgattggatg tgacaatttc ttttaatact gtcgcaacat
     4801 cttctctagg aatttcacct ttaccttcaa aatattgtgc agcttctatc tttccagatc
     4861 ctgctgcatt tgtaagtgcc cctggatgta aaattgtata atttaaacct gaacgtctta
     4921 aatagtcatc agcgtaatgt ttagcaattg tatatggctt taaatcaccg ctatcatcaa
     4981 aagcctgacg tctcgaatca tatgttgaaa ccataacata gtgtttaata ttagcctctt
     5041 tactcgcaat cattgattta acagcaccat ctaaatcgac aataattgtt ttatctgcac
     5101 ccgtgttccc tccagaacct actgaaaaga taactttatc gaatggttta aacgtctcag
     5161 ttaaagtctc tattgaatca ttttcaacat caacaagaat tgctttcata ccttgtgatt
     5221 ttaacgcatt aagtttatcg gattgcctaa cacctgcagt aaatggtaca ttttcttttg
     5281 ctaattgttg cactagtaac gaacctacac cgccattagc acctataacc aaaatattca
     5341 tttacaacac tctcctattt attattctct atgccatacc actttatgag atatgtaaaa
     5401 cttattacaa ctataaaaat caattgacat actactggga acatattaaa ttaatatatg
     5461 aacaaatatt catatgaaag gattgtcata taatgacaga acaatattca gaaataaata
     5521 cagatacatt agaacgcgta actgaaattt tcaaggcatt aggcgattac aatcgaatac
     5581 gtattatgga attgttatca gtcagtgaag caagtgttgg tcacatttca catcaattga
     5641 atttatctca atcaaatgtc tcgcaccaat taaaattact taaaagtgtg catcttgtga
     5701 aagcaaaacg acaaggccaa tcaatgattt attcattaga tgacatccac gtagcaacta
     5761 tgttaaagca agccatacat cacgcgaatc atcctaaaga aagtgggtta taatatgtct
     5821 cattcacatc atcatgacca tatgcatagt catgtaacta caaataataa gaaagtattg
     5881 tttatatcgt ttttaataat cggtctatat atgtttatcg aaatcatcgg cggtctcctt
     5941 gctaacagct tggcattact atctgacggt atccatatgt ttagcgacac attctcatta
     6001 ggtgttgctt taatcgcatt tatatatgca gaaaagaacg ccacagctac gaaaacattt
     6061 ggttataaac gtttcgaagt actcgcagcg ttatttaatg gtgtaacgct ttttgtaata
     6121 agtattttga ttgtttttga agcgattaaa cgcttctttg ttccttctga agttcaatca
     6181 aaagaaatgt taatcattag cattattggt ttaattgtca atatcgttgt tgcattcttt
     6241 atgtttaaag gcggcgacac gtcacacaat ttaaatatgc gcggtgcttt tctacatgtt
     6301 atcggagact tattaggttc agttggcgcc attactgcag ctattttaat ttgggcattt
     6361 ggatggacaa tcgccgatcc tatcgcaagt attttggttt ccgttattat tttaaaaagt
     6421 gcttggggta tcacaaaatc ttcaattaac attttaatgg aaggcacacc aagtgatgtt
     6481 gatatagatg aagttataac tactattaaa aaggattcac gaatacaaag tgtgcatgat
     6541 tgccatgttt ggacaatttc aaatgatatg aatgcattaa gttgtcatgt tgttgtagac
     6601 catacattga caatgaaaga atgtgaatta ttattagaaa acattgagca tgatttatta
     6661 catttaaata tccaccatat gactattcaa ttagaaacgc ctaatcacaa acatgatgaa
     6721 tcgatgatat gttcaggaac acatagtcat tcacataacc atcatgctca tcatcacgcg
     6781 catgtacatt aataatttta acctactgcc attgcatcga ttaaactttt caatggcagt
     6841 aggtttttta tgtatttatg gcgacttgtt tggtctttga tgatgcaatg tttattaaca
     6901 cattttcaac tattatttct tacattagtc atatttttga caatttacta ttataattct
     6961 ctaactttag tcactttaat taatttttat tagatattaa tatgaaaata acgtgttttt
     7021 tgttattgta tttatatgaa gaaaaggagg caccactttg tttacttact ttaaatcagc
     7081 attaaaaaat gctaaaccac aattattaat aacattgata tatgcactta tagcatttgc
     7141 tgtaattgca gttgtatatt tacttgctaa tttccagctt gctaagtatg tacaaactat
     7201 tgcaatttat tcacaatttg ggcaaaaacc accaggagat gcatatttaa aagttatcgc
     7261 tgtattactt atagcagctg tagtttcact gttcgtttta gttcaaattt ttatcggaat
     7321 cacaaatgtt atgaaacgag caatgagtca tgaaaaagta aaatttaccg atttatttat
     7381 tgcatttaaa aaaggtattt atttaaagag cgttctgatc ggtcttgtat ctatagcaat
     7441 gattatcgtt ctttcacttc tgacatcatt actatacaaa ttattttctc cagtttcaga
     7501 aatgattatg aattcagtac aatcatcata tgcagatagt acacacctga ttggtattgc
     7561 tattacaact caaagcatca taatcattgt tgttttattg attaaagcaa ttattacttg
     7621 gttattgtta atacctgttt tcaactttat gactagtttc gttgaatcaa ctaacgataa
     7681 agtaaaaaca cacttagcta atggatttaa agcaatgaaa aatggtcaaa aaacattttt
     7741 caaatttttc attggaatac tattattaaa cttaattatt attttattta aaacacctgt
     7801 tggttacttg atttcattta atacgcaatc actttctcaa agtgttgcag aaaatatcat
     7861 aagagtttat acagtaatga caatcatttt attcgttgtt attcatgcaa tcattttaat
     7921 gggtatcgtt caatattact taaaacgtgg tcaaaaaatc actaaagata aagtaaaacc
     7981 agctgacaag gataaaaaag ttgtcactga accaaaaaat acaaaagtag aaactgataa
     8041 agtgacaaca tctgttgaaa caaaaacaga aaaagcacaa gattcattaa atgataatac
     8101 aacaaaaacg atgacttcag ataaaccaga agacaatcaa ccaaaataaa ttttagagct
     8161 ccttacaact ttagttgtta ggggctctta tgcagttgat gcgcagcatc caactgtgtt
     8221 cctctatttt tcaactttag tagctgatac cgaaataaca tgatgctaat ttcatggcat
     8281 gccgaaaaaa tatatgaaga ggtctgcagt gctttttata tagtccgtga ttacattcta
     8341 tactttttat tgttttttgt tgtattgata gttggcttta ttatttctga ttatgttcag
     8401 aactacaatt cataagaaaa atgtgttaaa atatatttgt agtaagtaga agcaaaagat
     8461 gaaaatcttt aactcttgaa acacaaaaag ggcaacactc ggaaacatgt taccctaatg
     8521 agcccgttaa aaagacggtg accttatatt ttatttaaaa atagccttca aaaatgccgg
     8581 tcaaagcgaa tagaaggtta ttttttatgg tcttgagtac taatcaatac taaaccaatg
     8641 attgttaata caaccatcag catttcaaaa tcagacatgc tagtcctttc taggagtaac
     8701 aactataacc ataggcatca cccctttatt aagagattag ccaccatcta tccaacttgc
     8761 tcaataaata ttataacatg cacactttta aacagtaatt catagtataa gttttttcat
     8821 ttcttaatca actcgataaa cagttgagtg acataccctt gtctaactag ctatttcttc
     8881 ccctgttatc gtttgttcat catataaaaa tttaatttct cattttttat tctctggtaa
     8941 agaggggcgc ccgctttttc ggcctctcgc tcttgttgct gctaagtcta ttttatacac
     9001 tcacatagta aattaacttc taatcctgaa aaatgcactc atcatcgtaa aaaacatttt
     9061 gcccattgtg tctttcgttg aaatgttcat gttactaatt tgtaagtcaa ttccgttatc
     9121 atcgaatcat tgtgataatt caattaatag ttttgtcgtt ctacctaacc gatcaagttg
     9181 atagacaact aatgtgtcgc tctctcgtaa ataatctaaa cacttaacaa gctctgtacg
     9241 tttgacacca cttattcttt cactatatac acacccacac ccaaattctt taagtgtatc
     9301 gatattaatc tttcgtttat acacgatcat aaccaatttt agccatttaa ataaaacctc
     9361 tcttcaacat attatattta gttatgactc aaaactcatt gccgtatttt tgattttgta
     9421 ttaatatatc aaggctatca tcatctaata tcaaatgaat ttctccactt cgactatcaa
     9481 tagcaacgtt tatttttgat tctaactttt tcaaataatc tatgtcagta attatgtact
     9541 tagaaagata ttcgtcttct tttttaaatt tttctttatc aattgtatat cctttctcca
     9601 acatttttga taactctata agcgtattac tcctactttc ttttttaaca taagacacta
     9661 catagttaat gaacttttca atcaattgtt cttccaaatc actataatct tgtgtatcct
     9721 ttttaaataa ttcaatcata atattattgg ataaattttc attatatatt aatcgctcgt
     9781 acataccaga agcgctagag ttgataaatc tattcagatc gttttgtatt tcgttcaaat
     9841 ctatattccc tttactatcg taatatgaat aattactcat taattttttt aagaaatctc
     9901 tcaaaccaaa gtaaagataa atatttgaat actttctggc attatcgtag tcttttacat
     9961 ctcttttata gtgatctatc aacatatcca attcgaaatt atatccatga ttaaaatcaa
    10021 aatcgccatt gtcatatttt ctttgaaatt caaacttgta tatttctgca actttatcat
    10081 cgcaattttc atctatatag ttttcaacca aataataagc acgctcaaga gaaatttcac
    10141 cataacttta gataaaagag gttaagtact ctgttttctt taaaatttct tctcctttct
    10201 tagttggtat atatacatat ggtaaatcta agttatcaat aatatgataa ttatcgtcaa
    10261 tacgtttaat taattcaggt ttattacctg ttgtttttat accaaaactt tttaaaatac
    10321 tttgtaattc aggtcttgtc tttttgtata tactaacttc aaaatcatta gtcgttgata
    10381 ataacttagc ttcaattaat ttttttattg aatttataat ttcaaaatca ttattagcaa
    10441 gacatttatt agcaaatatc tcttctccaa ccaatctatt tacattagtg tgtaatacta
    10501 ataaatcacg tgcatttacg ctcactagct ttcatctcct catttttgct tttcaaattt
    10561 attaagtatg aataaaaaat acatccgaac aaacaaaatc tctatattct aattcggttt
    10621 acatagatta tacactaaaa aaatgattct caatgcaaat gaatgtgtct ctcatagtct
    10681 aaaaactcgt atgtttcgaa ttttatgatt cattgataat agtaccagtt aaaagaacta
    10741 agattgtaat tatctcccct taaaattcaa gaatatattt tcttaatcta tcagcaagag
    10801 gttatatttc aaagtgttta tttttaaaac aacatctaaa agccattttc ataataatgt
    10861 taaatcatta gaatgtataa agattacaat taataaaaat agataaaatg caataaagtt
    10921 ccaaatactt attattattc atcacaaatt acgtgatgcc ctctacaaca ctaaatcaag
    10981 gatgatattt attttatata cattagcatt cattgtttgc ttacccacat tatcctgatt
    11041 agtctttttt ataactctag tcttgaatgt tatatttaca aaaaatacta aaacatttaa
    11101 aaatagcact atttatttac tttgttcttt tatagcatcg tttatgttta ttttcttgaa
    11161 ttcagaaaat agtatggaga ttataattta atgtagatat atttgaagta tactttagtg
    11221 taaattgcat tggcgatatt ggtaaaagaa ctggttgatt ttatagtgga gttacacttc
    11281 atgaataaca agaactaaaa cagtcaatag gtgtgaatgt tttcaaagac ggctctgttg
    11341 ctactaaaaa aagaagccta caattcaaga gttagacctt aaaacaagaa atattattca
    11401 agctcaatga attccctacc ttattagttt taacaatatt tattctcata gagtttatcc
    11461 aattaaatgt agatgattca agtacttata atcatacaaa agagcaataa gaaattttct
    11521 aatagaaaat aaccttactg ctccttttca atactaatct ttatcttgta taaatttaat
    11581 ttcaatatac ttaagatcta ttaatcagct aaaaaatgct ctgctaaata tttagctgcg
    11641 ccatcttctt cattcgtata agtcgttaca tctgaagtta acgcttgtat ttcaggacgt
    11701 gcatttttca tagcaactgt ataatgacca aattcaaaca ttgccctatc attatcactg
    11761 tctccaataa ccaacgtttc atcttgacga atgccgaagt gttcaatcat ttctttaata
    11821 ccagtgccct tatcagtttg ataagccatt gtttctgcat taaatctcga tgaatttgaa
    11881 acacttatat gtagttgcac ttgattttgc ttcaattcat ctctaaatgt cgtgattttt
    11941 tctaaattcg aactgaaaag ataaattttt gaatattcac cctccggaaa gtcacttacc
    12001 catttaatct tgcctgcaag tgcatcttgt ctagaagacc attcactatg actcacacca
    12061 ttaattggat cttggctatg aatcatctct ctcatccatg tttcatcttc ttttaaagct
    12121 actctatttc cttcaaatgg gaatacttca taataaatat gttgttgttt agccaaatca
    12181 actatttgct ttacctgtgt taaagataat ccatgtttaa aaattgtatg tccatctact
    12241 tcaccaatgg ttccatttga actaatgatg ccatttaccg caaaatcttg aggtacaagt
    12301 tgatgtattt cagaatgcga acgtcctgtt gctaaaaata ctttatatcc tttctctctc
    12361 aattgattaa tgacatcttt cgtatacgtt gatgcttgat tattttcatg taaaattgtt
    12421 ccatccatgt ccaaaaatat tgcttttacg ttatccatat tgccctccac tgtccatttt
    12481 atcttaatta aattttgtca ttattacttt ttatttgcaa aatatttact ctaacattgc
    12541 catagaaaat cgattattcc atctttgaac tgctacattt ttctggaaaa atcgtgacat
    12601 gttttcagat gtcaaaatat catctattaa cccttgttgt acactttccc catcttttaa
    12661 tagcaaaatt ttagtaaagt ttccagtaat ttcttcaata aagtgcgtca cataaatcat
    12721 cgcaagcgtt ggatatgaat ctgacaatga gtcaagtata cttaacaacg attctcgtgc
    12781 aataaagtct aaaccagcta ctggctcatc taaaattaaa acctggggtt gccctattaa
    12841 agatcgcgca atcatcactc gttgtttttc acctgtagat aaataaccga tatattgttg
    12901 cgctttagca gacattccaa ctaatttaag taattgatgt gcttcattac gtacctcatc
    12961 atcaatatct tgataaacac caattgattt aaaagcaccg cttatcacca catcgattac
    13021 tctttcaccc tcttgaaact tttccagtaa actatgagat acaaaaccta tatgttgtcg
    13081 tacagtctct gcagaatacc ctaccttgcc tggcatttta ccaaatagat taacatcgcc
    13141 agttgtcgca ggctcatatg catttaatat atttaatagc gttgtcttac cagcaccatt
    13201 taaaccatat aaaatccatt tgtcacctcc attaatttgc caagaaatat tttttaaaat
    13261 tgtttttcct tgcttcattc gcccaacttg atctaattga attaacatgc gaggtcaccc
    13321 ctttattgct tctccatact tctcataaaa tcatattaac ataacaccct taattgtcag
    13381 actatttaaa taaataaact acttcatttt tacgcatttc tgccgactta agatgaagta
    13441 aaagctaagt cgacctaaaa aagcaccctt ctagtcgatt aatctaaaag ggtgccatat
    13501 actttaattt taatacatga ttgattctaa aaaagtgaat tattctacag taactgattt
    13561 agcaaggtta cgtggtttat caacatctaa atctctgtgt aatgctgcat agtatgaaat
    13621 taattgtaat gtaacaactg atactaatgg cgttaataat tcatgtacat gaggaatgac
    13681 ataagtgtcg ccttcttttt caagaccctc catagaaata atacatgggt gtgctccacg
    13741 tgctactacc tctttaacat taccacgaat tgataaatta actttctctt gtgttgctaa
    13801 acctacaact ggtgtacctt cttcgattaa ggcaattgta ccgtgtttaa gttctccacc
    13861 tgcaaaacct tcagcttgaa tgtaagagat ttctttaagt tttaacgcac cttctaaact
    13921 tacgttatag tcaatagtac gtccgataaa gaatgcattg cgtgttgttt ctaagaaatc
    13981 tgtagcaatt tgttccatga ttggtgcatc gtcaacaatc gcttcaattg ctgttgttac
    14041 ttttgctaat tctctcaata aatcaatatc tgcttcacga ccgtgctctt ttgcaacgat
    14101 ttgagacaag attgataata ctgcaatttg tgcagtatat gcttttgtag atgcaactgc
    14161 gatttcagga cccgcgtgta ataacaatgt atggtctgct tcacgtgata aagttgaacc
    14221 tgcaacatta gtgattgtta atgatttatg acctaattta ttagtttcaa ctaatacggc
    14281 acggctatct gcagtttcac ctgattgaga aatataaacg aacaatggtt tttcagataa
    14341 taatggcatg ttgtagacaa actctgatgc aacgtgtact tcagttggta cgccagccca
    14401 tttttctaaa aattctttac ctactaaacc tgcatggtag cttgtacctg ctgcaataac
    14461 gtaaatgcgg tctgctgctt taacatcatt gatgatgtct tgatcaattt tcaagttacc
    14521 ttctgcatct tgatattctt gaataatacg acgcattact gctggttgtt catgaatttc
    14581 ttttaacatg tagtgtgcat aaacaccttt ttcagcatct gatgcatcaa tttcagcaat
    14641 atatgaatca cgttctacaa cgtttccatc tgcatcttta ataataactt catctttttt
    14701 aacaataacg atttcatggt catggatttc tttatattcg cttgtcactt gtaacattgc
    14761 aagtgcgtct gatgcgataa cattgaaacc ttcaccaaca cctaataata atggtgattt
    14821 atttttagca acatagattg tgtctttgtc ttcagcatct aataaaccta atgcatatga
    14881 accatgtaat aatgacacaa cttttgtaaa tgcttcctca gttgaaagtc cttgatttga
    14941 aaagtattca actaattgaa cgataacttc tgtatctgtt tctgaaatga atgatacacc
    15001 ttgtaagtat tcacctttta actcttcata gttttcaata acaccgttat gaactagagt
    15061 aaaacggcca tttgatgatt gatgtggatg agagttttca tgattcggta caccgtgtgt
    15121 tgcccaacgt gtgtgaccga ttccaacagg tccatcaaaa tcgctactat cagcaacttt
    15181 acgtaattct gcaatacgac ctttttcttt aaatacagtt gtattatcat catttactac
    15241 tgcgatacct gcagagtcat aacctctgta ttctaatttt tctaaacctt ttaataataa
    15301 ttctttggca ttatcatagc caatataacc aacaattcca cacataacga cattttcctc
    15361 catattggaa tagtacgcgt aaattatgat ttattgccga taatttagat tgacaatctg
    15421 ctttcataat ataaatagga acatgctatc atcgcattca tccataacaa attaagcata
    15481 gttattttta caactataca aattgctcac actgtacttt ccatattaat attttttata
    15541 ttcaatttct ggcgatctta ttaactttgt ccattaagtc accctaatgt tttacttaat
    15601 aagctaacga atgagccaca tccgggatag catccgccga tctattcgat cactatcctc
    15661 ctcgtctaca aatacatata ttgcactcta taaaggccac tcatatatta acctttaatc
    15721 ttcaaataca aatatttatt tgcacaggcg ctttaactgt actgccgaac tttccccctt
    15781 tccattaatc attattgtac aacggtgttg ttttgttttg caaatatttt cacaataaaa
    15841 ttttaaaaat cctaaaacaa tttttttgtt ttactttttc aaaatatcta tactgtcaca
    15901 ttgatgacac tttatttaat tttgtcacat ttattttgac aaagttgatt tttgtttata
    15961 ttgagtaaca agtaacggct ctatacacta tatatagtca catatattaa aaaagaggtg
    16021 taaatatgtc acaaactgaa gagaaaaaag gaattggtcg tcgtgttcaa gcatttggat
    16081 cattcttaag tagtatgatc atgccaaaca ttggcgcttt catcgcttgg ggttttatcg
    16141 cggccatttt tatagataat ggatggttac ctaacaaaga tttagctact ttagcaggac
    16201 caatgattac ttatttaatc ccattattga tcgcatttag tggtggtcgt ttaatttatg
    16261 atttacgtgg tggtatcatc gcagcaacag caactatggg tgtcatcgtt gcattacctg
    16321 atacaccaat gttacttgga gctatgatta tgggtccttt agttggttgg ttaatgaaaa
    16381 agactgacca attgatccaa cctagaacac cacaaggttt tgaaatgcta tttaataatt
    16441 tttcagctgg tattttagga tttatcatga caattgcagg atttaaaatt ttagcaccac
    16501 ttatgaaatt tatcatgcat attttatcag ttgcagttga agcattagta catgctcacc
    16561 tacttccact tgtaagtatt ttagtagaac ctgcaaaaat tgtattttta aacaatgcga
    16621 ttaaccatgg tgtattcaca ccacttggtg cagatcaagc tgcaaaagct ggtcaatcta
    16681 ttttatacac aattgaatct aaccctggac caggtttagg tatcttactt gcttatatga
    16741 ttttcggaaa aggtactgca aaagcaacgt catatggtgc tggaatcatc cacttcttcg
    16801 gtggtattca tgaaatttat ttcccatatg tattaatgcg tcctttatta ttcatcgcag
    16861 ttattttagg tggtatgact ggtgttgcaa cttatcaagc aacaggattt ggatttaaaa
    16921 gtcccgcgtc acctggttca tttatagttt actgtttaaa tgcacctaga ggcgaattct
    16981 tgcacatgtt actcggtgtc ttccttgctg cacttgtatc attcgtcgta gcagctttaa
    17041 ttatgaagtt cactaaagaa cctaaacaag atttagaagc cgcaactgct caaatggaaa
    17101 ctactaaagg taaaaaatct agtgttgctt ctaagttagt atcttctgat aaagatgcaa
    17161 aagttgaaga gaatgtaaat actgaagcaa aaacgaatgc ggatgaatca tctacattag
    17221 aggatgatcc tgaagcgcta ttggataatt acaacactga agatgttgat gcacacaatt
    17281 acaataatat aaatcatgtt atttttgcct gcgatgcggg tatgggttct agtgcaatgg
    17341 gtgcaagcat gttacgtaat aaatttaaaa aagcgggcat taatgatatt acagttacaa
    17401 atactgcgat taatcaattg ccaaaagatg ctcaattagt tatcactcag aaaaaactaa
    17461 ctgatcgtgc tattaaacaa acaccaaatg ccatccatat ttcagtggat aatttcctta
    17521 attcaccaag atatgaagaa cttttaaata atctaaaaaa agatgatcaa gcataataat
    17581 taaataaatt aaaaaatgga ggataccgcc atgttattga gtacacgtga aaaagaaatg
    17641 atagccctat tgattaagta ccacggtcaa tatatcacta tacacgacat tgctcagcaa
    17701 cttgcggtgt cctctcgtac tattcaccgt gaattaaaag gtgttgaagc atatttaact
    17761 tcattttcat taactttaga acgcgcaaac aaaaaaggtc tacgcattgc tggcgcagat
    17821 tctgatttaa acgatttgaa gcaatcgatc gcacaacatc aaaccattga cttatctgtt
    17881 gaagagcaga aagtaattat tatatacgct ttgatacaag ccaaggagcc agttaaacaa
    17941 tatagtttag cgcaagaaat tggcgtttct gtccagactt tagcaaagat gttagatgat
    18001 ttagagctcg atttaaataa gtaccaacta tctttatctc gaaagcgtgg cgaaggtatt
    18061 tacttggtag gtactgaatc aaagaaacgt gaatttttaa gtcaattaat ggtgaataac
    18121 ttaaatagta ctagcgttta ttcagtaatt gaaaatcatt ttgtctttca ttcattaaat
    18181 caaatccaca aagactttgt tgacttagag cgtattttta atgttgaaag actattaatg
    18241 gactacctaa gtgccttacc ctaccaactt accgaatcaa gttatttaac tttaactgtc
    18301 catatcgtgc tatcaatttc acgtataaaa aatggagagt atgtcgcatt aaacgatgat
    18361 atttatgatt ctgtacaaaa cacatttgaa cacaaagtag caagcgaact tgctgataaa
    18421 cttggtcaaa tatatgacgt cacgtttaat caggcagaaa ttgctttcat tactatccat
    18481 ttacgtggtg ctaaacgaaa aaatcttaat gatacatcat taaataatcg ttgtgaagag
    18541 aacaaaatta aagcgtttgt taaaaaagta gaaatgattt caggtatgac atttgcagat
    18601 ttggatactt tagtcgatgg actgacgcta caccttaatc ctgcaatcaa tcgtttgcaa
    18661 gctaatatcg agacctataa tccgttaaca gacatgatca agttcaaata tccaagacta
    18721 tttgaaaatg taagattagc tttaaatgat tgttggcctg atttgatttt tccagagagt
    18781 gaaattgctt ttatagtttt acactttggt ggctcgatta aaaaccaagg taatcgattt
    18841 ttaaacatat tagtcgtttg cagcagtggt atgggaacta gccgtctatt atcaactcgt
    18901 ctagagcaag tttttagtga gattgagcgt attacacaag catcagtcag cgatttgaag
    18961 tcactagatt taagtcaata tgatggcatt atttctactg tgaatttaga catcgactcc
    19021 ccctatttaa cggtaaaccc attattacca gatagtgata tcagttatgt cgcacagttt
    19081 ttaaatacaa agtctacgtt ccaagagacg catgataaat catcaaacat gattgataag
    19141 gatgatgttc atgttgaaac gaaagatatt gatggcaaca catcttttga aaatgaacaa
    19201 acttcatact taacttcact tttcgaaaaa catttaagtg acgaaaaatc agaacaatta
    19261 atgcatcata tgcgttcggg tttaactttg cttgattcag tgaaaatagt tagtaccgaa
    19321 gttaaacagt ggcaaacata tatcgcagat tatctatatc aatgcgatgt aataaacaat
    19381 ccaacgtcat tcgctgaact actagagcaa cgattgattg acaatccagg atggatatta
    19441 agtccatatc ctgttgcaat accacaccta agagacaata tgattaaaca ccctatgatt
    19501 ctaatcacag ttttagaaga accgttaaca ttgcctagta ttcaaaatga caatcaaaca
    19561 attaaatata tgatttctat gtttattcct gacaatgatt ttatggcatc actggtaagt
    19621 gacttgtccg aatttttaag tttgaaatta gaatctattg atacttttat ggaaaatcca
    19681 caggaacttg aaacattatt aagaaacaaa tttttagaac gaattaaaaa acaatttatt
    19741 taggagtgta caaaatgagc gaattattta gtaatgacaa tatcttttta aatgtaaatg
    19801 ttaacagcca aaatgaagca attgaaaaag caggtaaagc cttagttgat agtggtgctg
    19861 taacagatgc ttatattcaa gcaatgaaag atcgtgagca agtcgtatca acatttatgg
    19921 gaaatggctt ggcaattcct catggcacag atgaagctaa aacaaatgtg attcactcag
    19981 gtttaacatt attacaaatc cctgaaggcg ttgactggga tggcgaagta gttaaagttg
    20041 tcgtgggaat cgctggtaaa gatggcgaac atttagactt gttatctaaa attgcaatta
    20101 catttagcga agaagaaaat gtggatcgta tcgttcaagc aaaatctgca gaagaaatta
    20161 aacaagtatt cgaggaggca gatgcataat gaaagcagtt cactttggtg ctggtaacat
    20221 aggtcgtggt ttcattggtt atattcttgc agacaacaat gttaaagtaa catttgcaga
    20281 cgtcaatgaa gaaatcatta atgctttagc tactgatcat caatacgatg ttattttagc
    20341 tgatgagtct aaaacaacga cacgcgtgaa taatgttgat gcaattaatt caatgcaacc
    20401 ttctgaagcg ttgaaacaag caattttaga agctgatatt attacaacag ctgttggtgt
    20461 taacatacta cctattattg ctaaatcttt tgcgcctttc ttaaaagaaa aaacaaacca
    20521 tgttaatatt gttgcttgtg agaatgctat tatggcaact gatacattga aaaaagcggt
    20581 acttgatatt actggacctc ttggtaacaa tattcatttt gctaactcag cagttgatag
    20641 aattgtacca ttacaaaaga atgaaaatat attagacgtt atggttgagc cattttacga
    20701 atgggttgtt gaaaaagatg catggtatgg tccagaacta aatcatatta aatatgttga
    20761 tgatttaaca ccatatattg agcgtaaatt attaactgtg aatacaggac atgcatattt
    20821 agcgtatgct ggtaaatttg caggtaaagc taccgtatta gacgctgtaa aagatagttc
    20881 aattgaagct ggcttacgcc gtgttttagc tgaaacaagt caatatatta ctaatgaatt
    20941 tgattttact gaagcggaac aagctggtta tgttgaaaaa ataatagacc gtttcaacaa
    21001 ttcttattta tctgatgaag taacacgtgt cggacgaggt acgttacgta aaattggccc
    21061 taaagataga attataaaac cattaacata tctttataat aaagatttag aacgcactgg
    21121 tttattaaat acagctgcat tgttattgaa gtatgatgat acagcagacc aagaaactgt
    21181 tgagaaaaat aattacatta aagaacacgg tttaaaagcg ttcttaagcg aatatgctaa
    21241 agttgacgat ggcttagccg atgaaataat tgaagcgtac aattcacttt cataatttat
    21301 tgagctttgt ttgaaacaag aagtttccaa cattattcgt taacaatcag taataatgta
    21361 gtagttccgt tgaattaaca atattaaatt tctgaacata aaaaatactc ccttcaacat
    21421 aaacacttaa cttgcgttat gtatgaaagg agtatttttg cgttaataat ttgttttatt
    21481 ttcaagccac agccacctat tcaatggcta ttggtcattt ctaaaacaaa ttcatattaa
    21541 ctgttagact tggttactta gtaaggaata tttccctatg aaataactag atgttcacat
    21601 tcttgaataa attttattct tcagtttgtt ggtctttctt agtgaatctt ctaattaaga
    21661 atgccatacc tgcacctaga gctaattcag catatggtaa atcgtcatta tgtgacatac
    21721 cagtatctgg taaagtttta gcttgttgtt taggcttatt aacttttcct tgttgggctg
    21781 atgttacctt agcttggtgt ttgtcagtgt tagttacttt aagcatacct tgattagcac
    21841 tattgcttcc ttttgaaact gttgctggag atgcattggc accgtcgttt tgcgtagctt
    21901 tattgtttac atctgcagtt gcaccaattg atgcttgatt atcttttgta tctgctgttg
    21961 acatgtcagc tttttgacta tcctcagtcg aagtcgcttt atcttttgct tctgacggtt
    22021 tagatattga tggtttattc gaaacttcag tatcaacgtt gccttcagat ttatctgctt
    22081 cgttagatgc aacgttagtt tcagacttaa gttgtccagc acctgtttga tttgtcgtac
    22141 tttctttttt atcttttgat gtattagaag atacttttgg ttctgttatg tctgctgaag
    22201 gcaatgtttc agctgttgat tcaaccatac tttgatttgt tgaatctcta ccatcttttt
    22261 ctgccttagc tttattttca gattttggtt gtgcaacctt gccattagtt gattgagatt
    22321 cagcactatt atttacttca gcattttgtt ttgaatcatt tacagatgca ttatctttgc
    22381 tatcagcaga tgatgctgca cctgtgctcg catttgttgt tggagccgtt gctgttgatc
    22441 ctgttggtgc gttctcgttt gttgcagttg tactattgtt atttgttgtg ctttctgctg
    22501 gcgttgcatt atctgtttct gttgcaggtt tatcagttgt gccgttatta gttgattcta
    22561 cttctggttt atcagttgta ccattacccg ttgccgaatt gtctgctgat tcatctacac
    22621 tagaattgtt attagctgtc ggtttattat ttgcatcatc agttgctgtt gtttcacctg
    22681 ttgccggatc actattattt ggtgttgtcg gagaagcgtc tgctttgcca ttatctgttg
    22741 actcagttac attaggttgt ccagtatttt ctggtgttgc attagcattt gaatttgctg
    22801 ttgcatcatt attatctgaa ccactattag tatcattagc atttggatca ttctgaggca
    22861 caatcgcttc aattgcaggt atcgttacat tttgtaattc agcaacttct gtatttgttt
    22921 gtgttttatc taatttatca gcaaatctgt caaaatatct acctaaatct gtacgtgcaa
    22981 tttctttcgc cgatgcatct gcatctgcat ttttaattat ttctatttgc ttgttaacca
    23041 cttctctaat tgcttccaaa gcatttttct taactactgg attaatacgt tgtgctttaa
    23101 gttgttcaag cgcactattt ttgacagtag cgatttctgc atttgtagtt tgatcagaaa
    23161 tatcttcagt tgcttttgat aaaatgtctt ctaaagcatt cgtaaacgct tctttttctt
    23221 cagttgtagc atcagcgtcg acatttacac ctgcttcaat ctggtctagt gcagtttcta
    23281 attcttcgat agctttttgt ttttctgttg agtcaatttg aatgttatca aatgcctcaa
    23341 gtccttgagc tttcgctttt tcaacttcag cagttgttgt tgcatcagta ataccttgtt
    23401 tagcttgatc tttaatttgt ttaatcattg ctaatgcttc agttttttct tcagcagtta
    23461 actggtcact atgatcaatt gattctttcg tatcttctgc tttagcttca atagcttggt
    23521 tcgctttagg tttaacagta gcatctactt gaatagcatc aattgctgct ttaccttgtg
    23581 ttaatgcatc atcaacgtca ccattatcca caccattatt aatgctttct aatgcagttt
    23641 gaacattttg gtcaacttgc ttaattgctt gttgcttttc atcttgtgtt gcattagtgt
    23701 cagctgaaat attatttttc ttttgatctg cataagcata taaatctgtt gtagctgttt
    23761 cttttttacc ggttggaatt gtgtaatcgt taatattatc taagtcagta tgaatttgaa
    23821 cttcaatgtc atctttagaa gtagcttgat ttacattttg atccgctgtt tgttttaatt
    23881 cagaaagttt ttgtttcgct tcagcaattt cacttgaagt cgatgcgtta gagttatccg
    23941 cttcgtttac tttagcatta tatgcatctg caattttagc taaagcatct tttttgtact
    24001 cactaaatgt tttaactgca ttaattcttg cttttccttc tttaactgca ttatcaacat
    24061 agtcattagt tgaagactga tcgacatttg ttttcgcttg gttaagctca gtatccactt
    24121 cttgctttgc atcattaatt tcctgttgtg atgcatttgg tgtttgttcg atttgtgttt
    24181 ttctatcagc tgctgcttga tctaattctt ttttacctgc tggcttctta acaggatttg
    24241 catgaagttg ttgaactttt tgtaccgctg tgtctttagc agtagttaca tcacctgttg
    24301 tatttgctgt atttatattg tttaaacctt cttcatatgc tgctctaact ggttctatat
    24361 cttttccttt ttcttcattt gtagtcgtat tatcattaag tatttcagtt attttatttt
    24421 gcatttcagt tagcaattcc gctctagcat tccttttaac atctgttgat gcttgaattg
    24481 ggtcaattgc ttgaattgca ttatcttttg cagtgtttac atcatcaatt gactgtgcat
    24541 tttcaatatt ttgattacct tgcgttaatt gtgcgtctac ttgttgattt gcttgttctt
    24601 tttcttcagt agtcgcatct gcagtttgtg caataagcgc tttttgttcg tttgcttttg
    24661 ttgctaattc atctttcgca acatctttaa ttgttgtatc tgcagtaata ccttgaacat
    24721 cagcaactgc tttatcttta atttgcgtaa catcattagt tgtttgtgca tttaaaatat
    24781 cttgatatgc tttttcttta gcttttaaaa ctaaatcttt tgctgcattt ttctcttcag
    24841 ttgtagcgtc agttgtatta tcaattgctt gattttgagt tgtcacagct tgatcaacat
    24901 catttttagc atttgattta accgctgttg ctggttgtgt gctttgaatt gaattctttc
    24961 cagcgtcttt cgcctgatct acaccattat catcagttgc agctgtaata ttatttttcg
    25021 cgtctgtaac tgctgttgct aattgttgaa ttgcagcttc tttttcttca tttgtagcat
    25081 tttgatcatt attaataact gatgtttgag ctacttgtaa ttgatcaatc tcatctttag
    25141 ccgcttgttt cttaacaact tttggtgtta ccgcattaat cgctgcttct gcattagctt
    25201 tcgcttcatc aacatcggca tttgttgtag ctgctgcgat ggcttgaatt gctttaccat
    25261 tttcagtatt tgcttcagca tctgctgctt gtttttcttc atttgttgca tctggtgtag
    25321 cttgaattgc ttgcaatttg ttatttaaaa ttgttgtaat ttcattacgt gcagttgctt
    25381 ttttattaac tgttggtgtt acttgatcaa tactagtttc accagttgtt ttcgcttggt
    25441 ctacatcatt ttgactatta gcagcttcaa tgttgctatt tgcttgtgtc acagcattat
    25501 ctacattggc atttgccgct gcaatttctt cagcagtaat gtcttgcgtt tgagcgatta
    25561 ctgttttacg ttcattcgct ttcgtagtga tggcttgttt cgcatcatct ttcgttgttg
    25621 tcgctggttg aattgcttca attttagcaa tttctgcatt tttagccgct tcaacttctg
    25681 catttgaatg tgcaccatct attgctgcat cagctgttgt tttttcagtt tgaacttgtt
    25741 gtttcgcagc tgctttttct tcagttgttg caccattatt agcatcaatt gctgtctctt
    25801 gtgcctgtac tttgtcagta attgcttgtt tcgctgttgg tttaacattt gcatctggcg
    25861 taattgcagc tattgtagct tcattagtag tttttgcatt atctacatca gtattagctg
    25921 ctgcgttatc aatatctgta ttagcagtaa ctactgcttg atcaactttg tctttcgctg
    25981 cttgttgttc ttcagtagtc gaatcattca ttgcttcaat tgcagtttta cgttcacttg
    26041 ctttttgagc gatttccgct ttagcatccg atttcttagt tgttgccgct tgtacttgat
    26101 taattgcagc aataccattg tctttagctg ttgttacatc actgtttgta tttgcagcat
    26161 caagatttgt tcttgcttct tgctttttag tatctaattc tgtatatgca gcttgttttt
    26221 cttctgtagt tgaagcattg ctattttgaa tttcttgttt acgtgtatta tatgcgtttt
    26281 ctacttccgt atcagctgca ggtttaactt ttgcttgtgt ttgaattgca ttgattttat
    26341 ctaatacttt tgattttgta tcagcaacat cctgttttga tttaacaact tggatgtcat
    26401 gtaaaccttg cttttgagct gcgtctactg ctgcatcagc ttctgctact tcttcattag
    26461 ttgcatttga aactgtagca ttttgagctt ttctagctgt tgcagcttgt ttaacttcat
    26521 tataggcatc catttttgtt tgagtagagt cagtaatatt ttcaattttt gagatttctt
    26581 cgtttttaac tctttctaaa tcttgtgcag tcgttgtcgc ttcaattgct ttaacaccag
    26641 aaactttagc tgcattaata cgcccaatag cttccgctac ttcttcattt gttgtatcag
    26701 gatttaaagg tgcttgatca atttgtgctt gaacaacttc gtcaaattct tcaagagctg
    26761 ctgctttagc tgttgtagca ggtgcagttt gattaatatc attgatcgct tttgttttaa
    26821 tggcttctac ttgtgcattt gttgttgctg catcaatatc tttaattgcc tttgtttcaa
    26881 ttttaccaat tttatcattt gctacatctt tttcatcttg taatgatgca tttgactttt
    26941 taatttgttg tttacgagtt gtaactgctt ggataatatc ttgtttcgct tgaggtttaa
    27001 ctgttggtgt aatcacatct tgttctaaca ctgcgatacc gttatctttt tcagttgtaa
    27061 caccttgtgc tgttgtttgt ttattaattt ctgcgattgc attattttta tcattgttaa
    27121 ttttagtcac aagcgctgca acttcatctt gcgtaacttt tttactttgt tgtgctgctg
    27181 taaccttttc ttgagcttta gcatctaatt cagcaattgc tgcttgatta tcaattaatg
    27241 cagcttgtaa tttagttact aaaccgtcaa tatccgcttg agatgcacga tttgcagttt
    27301 caacatgatt cgcatcttca tttaaaatag tgtctgcttg ttgtttaagt ttattgtatt
    27361 ctgcaattga tgctgttgtg taatgactat tatcaacttg tgagtttact tgttgttgca
    27421 acgcatcttt gttcatttca accgctactg aaaatggatc tgcagttagt gtaacttctg
    27481 gttgcgcatt attaattaca acatctgaag cagtacgata tgttaatttt tcattaaaat
    27541 caatattttt aggtgtatcg atattcgcaa cattaacttt atatgataat tttaaagatt
    27601 tatctgggaa taaaacttct ttagtgtgtg taccacgtgc cgttgtcaca ccttggcttg
    27661 taaatgtaac tttatttgca ttttgatcat aattaacagt catatttttc aatactgtac
    27721 tgtcttcatt accattaggg aatgttgtag ttaatgaatc attaacgtaa gttacacctt
    27781 gtggtaatgt tacttcatat ttaaattgat ctgcttttaa tgaagcacca aagttaccat
    27841 tgttaccgat ttcagtatta attgtaaatt ctttattatt tgttgctttc ggtgctaaat
    27901 ctctattttt gacatataaa tgtgatcctg agaatagacc tacattatca atgaatgaat
    27961 agtatttata accatcttta tttgttgtaa ttcttgaagc atcagcaact gctgtattgt
    28021 caggaataaa ttgtaaatct aaacgatcag catctgttgg tactttaaat aagtgtgcag
    28081 taccagtctt agctacattt acagttgcta attcagtatt tttcttagca tctttaataa
    28141 ctaaatttgt tgcaccttgc ttactattcg tttgcatagt agtaaagttg ataattaatt
    28201 ctgaatctgg ttttacatta acggtttttg aaataccgtt aaagttacca tgatctgtag
    28261 aatcatttgc attcacacga cctaatgcag ctacatttcc cctagcttga tagttttgag
    28321 ggttattctt atcaaacata tcgcttcgtc ttaattctga gttaacgaaa ccaatcttac
    28381 cgttgttaat taatgaataa ccgtttactt tatctgtaac agttacaatt ggatcctgtc
    28441 tattctcatc tgttgatatg gcaggatcat caaacgttaa tgttgtatta atactgcctt
    28501 caccagtatt gctagcattt ggatcttgag tttgtgcgtt tgctgctaca ggtgctgctg
    28561 gttgcgctgc tgctggagca ttcgctggct gtgtttgatt tgccggtgtt gcattattat
    28621 taggtgttgc ttggttattt ccttgacctg cttggtttgc cggtgctgct tgatttccag
    28681 gttgtgcttg tgcagcgtta ttcggatcag cttgattacc ttgtccagct ggttgtgtat
    28741 ttggttgtgc tgctcctcct gctggattag cctgtccacc ttggcttgct ggttgtgctg
    28801 ctggttgtcc ttggttggca ggtgtagctg gctgtgctgt aggattagct tgagcaccag
    28861 catttgcgtt aggctgtgta ttggcatcag ctggttgtgc tggttgattt tgtgcaggct
    28921 gattttgctc tgctgcagac gctgttgtcg ggttagtaga tataaaagta acagtggcaa
    28981 ttaaagctga aaaaataccg acattaaatt ttctgatact aaatttttgt tgtctgaata
    29041 aattcattaa gtcatcctcc tggttgatta ttctcgctgt taaatgattt cacttaatca
    29101 actgttaaga taagtagtag catctgcgtt aaaaacacaa agcaactcta tctaattaaa
    29161 attaatttta tcatcattat atattgagta ccagtgtatt ttatattaca tattggttac
    29221 tttgttttta ttttgtttat atcattttac gtttgtacta taaattattt ctacaaacac
    29281 aaaaaaccga tgcatacgca tcggcttatt tgtaatacag tatttattta tctaatccca
    29341 ttttatcttg aaccacatca gctatttgtt gtgcaaatct ttcagcatct tcatcagttg
    29401 ctgcttcaac catgacacga actaatggtt ctgttccaga aggtcttact aaaattcgac
    29461 cttctccatt catttctact tctactttag tcataacttc tttaacgtca acattttctt
    29521 caacacgata tttatctgtt acacgtacat taattaatga ttgtggatat tttttcattt
    29581 gtccagctaa ttcacttagt gatttaccag tcatttttat tacagaagct aattgaatac
    29641 cagttaataa accatcacca gttgtattgt aatccatcat aacgatatgc ccagattgtt
    29701 ctccacctaa gttataatta ccgcgacgca tttcttctac tacatatctg tcgccaactt
    29761 tagttttatt agatttaatt ccttcttgtt caagcgcttt gtaaaaacct aaattactca
    29821 taacagttga aacaatcatg tcattattca attcttgatt tttatgcatt tcttgaccaa
    29881 taataaacat aatttggtca ccgtcaacga tttgaccatt ctcatctact gctataattc
    29941 tgtctccatc gccgtcaaat gctaacccaa aatcactttc agtttcaact actttttcag
    30001 ctaatttttc aggatgtgta gagccacatt tctcattgat attatatcca tcaggactac
    30061 atccaattgt ttcagtatct gcttctaaat caccaaataa gaatggcgct agtgatgatg
    30121 ttgaaccatt tgcaccatct aaaacaattt tcaaaccttc aaagttaaca tctactgttg
    30181 attttaaata gctcaaatat ttttgtgccc cttcaaagta atctgaataa tgtacaatat
    30241 cattgccaac tggtcttggt aattctgggt tttcttgatc caataatgct tcaatttcat
    30301 tttcttgttc atctgatagt ttaaaaccat ctgatccaaa gaatttaata ccattatctg
    30361 caactggatt atgagaagct gaaatcatta cacctaactc tgcacccata tcgcgtgtta
    30421 aatatgcaac acctggtgtt gaaataatac ctaatcgcat cacttctgca ccaattgaaa
    30481 tcaaaccagc tattaatgct gattctaaca tttcacctga aactctagta tcgcgaccta
    30541 caagtacacg tgggtgtttt tcacctttat tatgtgctag aacatagcca ccgtatcttc
    30601 ctaatttaaa tgccaattca ggtgttagtt cttggtttgc gacacctctt actccgtctg
    30661 taccaaaata ttttcccatt gtttactctc ctttaattta gctatttatt ttacatttat
    30721 ataagccttc gtttcacttg gttgtgcttt agtgacatgt tctggtaagt tgatttttac
    30781 agtcttttca gttgattctg aaataccatc taaatctact tctgcatcaa cttcgcttat
    30841 attttgcaag tcatctcgac taccgaagat ttcaatttct ttatcttcta agtcaatcga
    30901 acttaattct ttatcatctg ctaaactacc tttctgttta acatttactt taaccttttt
    30961 gctaaaaggc tctactttaa cttgtaaatt cacttcatta ggttgaatcg atacatttaa
    31021 tttattcagt tttttatcaa aagccgttac ttctgcgaca tcttttgtgt caccattaat
    31081 ctttttatta gttttaaaag tggcttttaa ataagcaata tcattcaatt gttcttctcc
    31141 acctgttact ttaactgttt gtggtgaaac ttcttgcttt gtaattttaa aaagtggatc
    31201 aatatcactc tgacttacat caggttgaac tgtcatcttt ttagttactt tgttttcaag
    31261 cgtaatattt gctaatttag gttttacaga ataatgaatg tcatcagcta accctttaac
    31321 ttgatacttc tcttgatatt ttccagcttt agcatttgat aaatcaatca ctactcttaa
    31381 atcttctgga ttttcaattt ttattatctt tgattgtggt cctgaaatag tcacattaac
    31441 tgtttcaggc gcttttgtta aatgcaaatc tttagtgtta taaagaattt caacgggtac
    31501 atcttgaatc gttttactag acttttgacc aagattacca gtgttaaaga tatttccaaa
    31561 aacattgtta acagataaaa agaaaaacaa tgccaaaaga aaggcaataa atctcaagcc
    31621 ccatttactt tctagcatat tatttcacac ctttcttttg aaagcgtgtg ccaaaccaat
    31681 gttcagcaag caactcttca aaaatttcgt ttgaaatgtc tcggcgtaat tttccatcaa
    31741 atgttaccga aatatcacca gtttcttcag atacaataac ggtaaatgca tcagatactt
    31801 ctgaaatacc aaccgcagct ctatgtcttg tacccaaact tttagatatc ttaggactat
    31861 cagacaatgg caaataactt gctgctgctg caatcttcgt gccttgaata atcattgcac
    31921 catcatgtaa aggtgtgtta ggtataaaga cattaattaa aagttcttgc gaaatatttg
    31981 aatccattgc aatacctgtt tcaatataat cttgaagacc tgtttctttt tcaaagacaa
    32041 ttaatgcacc tatacgtctt ttagccatat attgcacagc ctttgaaacc gattgaatca
    32101 atttctcttc atctttacta tacgtattag aagtatagcg ttttaaaaag ctacctctac
    32161 caagttgttc taacgcacgt ctaatttctg gttggaatat tactattaaa gctaataccc
    32221 cccattgaat aacgatatcg aataatttag atgttgcagt caagttcaat atcatactta
    32281 tctgctgacc aataacaatt actaatatcc ctttaagtaa ttgtatcgct ttagttccct
    32341 taaagaccgt gatgagaaga taaagtacat accaaactat cagtaaatca aggatactcg
    32401 ttacaatttt taacgtactg aggttttgaa aaaagttgga aaaatccata acatctcctc
    32461 cgggtaatat ttttccataa tacccattat accaatcatt tacatcactg tcatacgaac
    32521 atatatttaa atagaaaaaa tttattttaa agattataac tactcttaat cattttagtg
    32581 aattaaaaaa agtagtgcaa aaagcaaaat atactttata cactacaaat catttataat
    32641 aaagtttcac caaaaaatgt tccaactaac gaaaccgctt gttcagcagt atgattatta
    32701 ctgtcaatca atggatttac ttcaactaaa tccattgagg aaattaaatg tgattgatgc
    32761 agtaattcca atgcaaaatg gctttctcta taactaagac cacccaaaac tctagtacca
    32821 gtgcctggcg tttcaagcgg atctaaagca tcaacatcta aagataaatg aacgccatca
    32881 acattgcgtg acttcaaata ttctattgta ttttcaatta cttcctttat ccccaattta
    32941 tcaatatctg acatagtaaa tgttttaata ttatgatctt tgataaattg tctttcacct
    33001 ttatctaaat ctctcatacc aattagtacg atgttttctg gcttgattac attactattt
    33061 aattctaaaa gttctttggg accttcacct gtcaaaatcc ttaaaggcat accatgaata
    33121 tttccacttg gtgactcttc aggtatattt aaatcaccat gtgcatcata ccaaataaca
    33181 cctaaattat tataatgttt acttattgct gatactgaac ctaccgcaat agaatgatct
    33241 ccaccaagaa ctagaggaaa tctgttattt tcaattgatg ctgaaacttc tttatttaat
    33301 ttttgattaa catctataat ttcatcataa tttcttaatc ctttttgttc actatgaaat
    33361 ttttcaatgt tcacagcagg taccttaata tcccccttgt catatacatc aaggtctaat
    33421 tgctttaatc ttgaaattaa tccagcatat ctaattgctg ttggtcctaa atcaacacct
    33481 aattttcttt gtccaaatgt tgatggtgca cctataatat caattgcttt tgtctttgtc
    33541 ataagcgtcc ccctttgctc tatgtaatta aagaataatg tatgcgctta ccattatcaa
    33601 gcaatagcta cacatataat ctgtttatct tattacttca taaaaaaagc actttccaaa
    33661 aatggaaagt gctagtagtg agccatagag gattcgaacc tctgaccctc tgattaaaag
    33721 tcagatgctc taccaactga gctaatggct ctaatggctg ggctagctgg attcgaacca
    33781 acgagtgacg gagtcaaagt ccgttgcctt accgcttggc tatagcccaa tatatagatg
    33841 gtggaggggg gcagattcga actgccgaac ccgaaggagc ggatttacag tccgccgcgt
    33901 ttagccactt cgctacccct ccagcttatt catataattt aataatcaaa atggtggaga
    33961 atgacgggtt cgaaccgccg accctctgct tgtaaggcag atgctctccc agctgagcta
    34021 at
//
LOCUS       DALMNS010000019        33605 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.019, whole genome shotgun sequence.
ACCESSION   DALMNS010000019 DALMNS010000000
VERSION     DALMNS010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 33605)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33605)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33605
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.019"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..712
                     /locus_tag="O6Y56_000726"
     CDS             <1..712
                     /locus_tag="O6Y56_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000913244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1672 family protein"
                     /protein_id="HDB5574010.1"
                     /translation="DNFGLKVKATNVVGSGDGVEVYVHCDDHDIVFNASIPFDKSIID
                     SDSSLRSEDKGDDMSTLVGTVLSGFEYRAHKEELDNLTEVLKEYKSKYKYTGYTENAI
                     MKTQNSGFRNEYYYLTAIPYTLDEYKRYFQPLIKEDDKSFRDGMRNSKKQLKDKSRPY
                     VVTTLFSTKDNFTKDNTIDEMIDFSEVLKKKKNIPHDLNVSLQISNKYINTTRPNYSK
                     KDVIEVGVFNHEKTNTND"
     regulatory      919..1053
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            1115..1660
                     /locus_tag="O6Y56_000727"
     CDS             1115..1660
                     /locus_tag="O6Y56_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HDB5574011.1"
                     /translation="MQQNKRLITISMLSAIAFVLTFIKFPIPFLPPYLTLDFSDVPSL
                     LATFTFGPVAGIIVALVKNLLNYLFSMGDPVGPFANFLAGASFLLTAYAIYKNKRSTK
                     SLITGLIIATIVMTIVLSILNYFVLLPLYGMIFNLADIANNLKVIIVSGIIPFNIIKG
                     IVISIVFILLYRRLANFLKRI"
     gene            complement(1766..2014)
                     /locus_tag="O6Y56_000728"
     CDS             complement(1766..2014)
                     /locus_tag="O6Y56_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002449743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HDB5574012.1"
                     /translation="MAKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAFVILDDNQGT
                     AEVPEELYEDMEDAIDGCPTDSIKIADESFDGDALKFE"
     gene            2122..3075
                     /locus_tag="O6Y56_000729"
     CDS             2122..3075
                     /locus_tag="O6Y56_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDB5574013.1"
                     /translation="MQHIIKTALQQTFNYKTNKSIYNILVGKKSHQTFFDACSQQQLS
                     LYHSLPLLKYPSFELFLENITEFNAEMEIMLHPRYTFESMGQTFQAIQLLVQTMSNTM
                     QQDFRFVPISQNNKIQETVKIVYNYIKENKLQIDFENELHNLFKAITLKGPCYLHYYL
                     QGYDEPMYTRQQVSLIEKLSQQQLFEYEMNNLVTMMFELESGEYTILSKIIMKPTLLN
                     QTYITYTRLLEQFTMEDIAAQQQVKINTIEDHVLEILIKGYMSNYDDYVEQEDQLQFL
                     NFYQQHRGERLKFYKEQFDTLSYFQLKVLIVGFERGDLNVA"
     gene            3065..4444
                     /locus_tag="O6Y56_000730"
     CDS             3065..4444
                     /locus_tag="O6Y56_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HDB5574014.1"
                     /translation="MLHDILRNKFGFESFKPGQQEIIESIMSQQHTLGILPTGSGKSL
                     CYQIPTYLSGKPTLIISPLISLMDDQVMQLKINGEKRVTCIHSGMDEIEKKHNIKCLR
                     HSRFIFLSPEFLLQPANFKLISTIDFGMIVLDEAHCLSEWGYDFRPHYALIGKVTKHF
                     KEAVVLALTATAPPHLQDDLTEMLAIQFNVIKTTMNRPNISFKHLNFNDDEDKIEWLL
                     PFLQQSGPTIIYVSSKKMCLNLAQLIYDSGFLTGIYHGDMNYQERHTVQQQFLNNDIP
                     IIVATSAFGMGINKKDIRTIIHFHLSTSPSNYIQEIGRAGRDGELSQAISLFQPDDKY
                     ILETLLFADMITEEDVQNFEIGEFLAPDKQDVLTTLHSFYSIGALKQIFKQSFKRKQL
                     GFFRMIGYCKLDQCRRKYLLEFFGEYPPTQDRCCDNDSNITDIAILNKKKVIRSIGFD
                     EKLQNLFLR"
     gene            4597..6057
                     /gene="ebpS"
                     /locus_tag="O6Y56_000731"
     CDS             4597..6057
                     /gene="ebpS"
                     /locus_tag="O6Y56_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elastin-binding protein EbpS"
                     /protein_id="HDB5574015.1"
                     /translation="MSNNFKDDFEKNRQSIDTNSHQDHTEDVEKDQSELEHQDTTENT
                     EQQFPPRNAQRRKRRRDLATNHNKQHHDESQASDDNVQNEAGTIDDRQVESSHSTESQ
                     EPSHQDSTPQHEEGYYNKNAFAMDKSHPEPIEDNDKHKTVKDAENNTEYSTVSDKSEA
                     EQSQQPKPYFATGANQSETSKDEHDNDSVKQDQAEPKEHHSGKKAAAIGAGTAGVAGA
                     AGAMAASKAKKHSNDAHNKSNSGKANNSTEDKASEDKSKDHHNGKKGAAIGAGTAGLA
                     GGAASKSASAASKPHASNNASQNHDEHDHHDRDKERKKGGMAKVLLPLIAAVLIIGAL
                     AIFGGMALNNHNNGTKENKIANTNKNNADESKDKDTSKDASKDKSKSTDSDKSKEDQD
                     KATKDESDNDQNNANQANNQAQNNQNQQQANQNQQQQQQRQGGGQRHTVNGQENLYRI
                     AIQYYGSGSPENVEKIRRANGLSGNNIRNGQQIVIP"
     gene            6182..6298
                     /locus_tag="O6Y56_000732"
     CDS             6182..6298
                     /locus_tag="O6Y56_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574016.1"
                     /translation="MLFNKVLSRILAYQLNFLHSHQKDKTPQSTNLTRMNKK"
     gene            6459..7445
                     /locus_tag="O6Y56_000733"
     CDS             6459..7445
                     /locus_tag="O6Y56_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpdA family putative bacillithiol disulfide
                     reductase"
                     /protein_id="HDB5574017.1"
                     /translation="MQKVESIIIGGGPCGLSAAIEQKRKGIDTLIIEKGNVVESIYNY
                     PTHQTFFSSSDKLSIGDVPFIVEESKPRRNQALVYYREVVKHHQLKVNAFEEVLTVKK
                     MNNKFTITTTKDVYECRFLTIATGYYGQHNTLEVEGADLPKVFHYFKEAHPYFDQDVV
                     IIGGKNSAIDAALELEKAGANVTVLYRGGDYSPSIKPWILPNFTALVNHEKIDMEFNA
                     NVTQITEDTVTYEVNGESKTIHNDYVFAMIGYHPDYEFLKSVGIQINTNEFGTAPMYN
                     KETYETNIENCYIAGVIAAGNDANTIFIENGKFHGGIIAQSMLAKKQTPLES"
     gene            complement(7560..8528)
                     /locus_tag="O6Y56_000734"
     CDS             complement(7560..8528)
                     /locus_tag="O6Y56_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HDB5574018.1"
                     /translation="MKHLLVIHTGGTISMSQDQSNKVVTNDINPISMHQDVINQYAQI
                     DELNPFNVPSPHMTIQHVKQLKDIILEAVTNKYYDGFVITHGTDTLEETAFLLDLILG
                     IEQPVVITGAMRSSNEIGSDGLYNYISAIRVASDEKARHKGVMVVFNDEIHTARNVTK
                     THTSNTNTFQSPNHGPLGVLTKDRVQFHHMPYRQQALENVNEKLNVPLVKAYMGMPGD
                     IFSFYSREGIDGMVIEALGQGNIPPSALEGIQQLVYLNIPIVLVSRSFNGIVSPTYAY
                     DGGGYQLAQQGFIFSNGLNGPKARLKLLVALSNNLDKAEIKSYFEL"
     gene            8605..9264
                     /locus_tag="O6Y56_000735"
     CDS             8605..9264
                     /locus_tag="O6Y56_000735"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500015.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HDB5574019.1"
                     /translation="MKAINIALDGPAAAGKSTIAKRVASELSMIYVDTGAMYRALTYK
                     YLKLNKTEDFAKLVDQTTLDLTYKADKGQCVILDNEDVTDFLRNNDVTQHVSYVASKE
                     PVRSFAVKKQKELAAEKGIVMDGRDIGTVVLPDADLKVYMIASVEERAVRRYKDNQLR
                     GIESNFEDLKRDIEARDQYDMNREISPLRKADDAVTLDTTGKTIEEVTDEILAMVNQI
                     K"
     gene            9307..9411
                     /locus_tag="O6Y56_000736"
     CDS             9307..9411
                     /locus_tag="O6Y56_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001803823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574020.1"
                     /translation="MHIQIECAVNDLLKLKGDFYSTMNESCLFIFGKS"
     gene            9528..9719
                     /locus_tag="O6Y56_000737"
     CDS             9528..9719
                     /locus_tag="O6Y56_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574021.1"
                     /translation="MSVTNLRIAKEADLVTKKVLCNNSRKMHYIRFSYYSIVKVAYLR
                     GFLFYKSIKFYYNISCREQ"
     gene            9975..11150
                     /gene="rpsA"
                     /locus_tag="O6Y56_000738"
     CDS             9975..11150
                     /gene="rpsA"
                     /locus_tag="O6Y56_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDB5574022.1"
                     /translation="MTEEFNESMINDIKEGDKVTGEVQQVEDKQVVVHINGGKFNGII
                     PISQLSTHHIDSPSEVVKEGDEVEAYVTKVEFDEENETGAYILSRRQLETEKSYSYLQ
                     EKLDNNEIIEAKVTEVVKGGLVVDVGQRGFVPASLISTDFIEDFSVFDGQTIRIKVEE
                     LDPENNRVILSRKAVEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDG
                     LVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIKGQF
                     RENDVIEGVVVRLANFGAFVEIAPGVQGLVHISEIAHKHIGTPGEVLEPGQQVNVKIL
                     GIDEENERVSLSIKATLPNEDVVESDPSTTKAYLESEEEDNPTIGDMIGDKLKNLKL"
     gene            11367..12677
                     /gene="der"
                     /locus_tag="O6Y56_000739"
     CDS             11367..12677
                     /gene="der"
                     /locus_tag="O6Y56_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDB5574023.1"
                     /translation="MTKPIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYS
                     SGEWLTHDFNIIDTGGIEIGDAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEM
                     VAQILYKSKKPVVLAVNKVDNMEMRTDVYDFYSLGFGEPYPISGSHGLGLGDLLDAVV
                     SHFGEEEEDPYDEDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEY
                     SYDGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDK
                     RVAGYAHEQGKAVVIVVNKWDTVEKDSKTMKKFEDEVRKEFQFLDYAQIAFVSAKERT
                     RLRTLFPYINEASENHKKRVQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEP
                     PTFVVFVNDVELMHFSYKRYLENQIRAAFGFEGTPIHIIARKRN"
     gene            12694..13692
                     /locus_tag="O6Y56_000740"
     CDS             12694..13692
                     /locus_tag="O6Y56_000740"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDB5574024.1"
                     /translation="MTKITVFGMGSFGTALANVLAENGHDVLMWGKNQDAVDELNTCH
                     TNKKYLKYAKLDVNIIATSDMTKAIQFADIYLMALPTKAMREVATQINDKLTSKKTFI
                     HVAKGIENGTFKRVSEMIEDSILPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDKN
                     VSKLTQDLFMNDYLRVYTNDDLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTR
                     GLAEISRLGEKLGADPMTFLGLGGIGDLIVTCTSTHSRNFTLGYKLGQGESMDQALSE
                     MNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKECVKDLMERDKKSE"
     gene            13863..14135
                     /locus_tag="O6Y56_000741"
     CDS             13863..14135
                     /locus_tag="O6Y56_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDB5574025.1"
                     /translation="MNKTDLINAVAEQADLTKKEAGSAVDAVFESIQNSLAKGEKVQL
                     IGFGNFEVRERAARKGRNPQTGKEIDIPASKVPAFKAGKALKDAVK"
     gene            14566..15138
                     /locus_tag="O6Y56_000742"
     CDS             14566..15138
                     /locus_tag="O6Y56_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heptaprenyl diphosphate synthase component 1"
                     /protein_id="HDB5574026.1"
                     /translation="METTVSKLERQIEERLKGVSEYESININHRLGKLLDSYDIPDVA
                     KVACLTIDTSMRHLDDITYNHLSKHSILIGDLISAHFYTLLAEINDLSFQNEISKAIV
                     EINELKSSLHHQALNDYEISQAIVKIETLFPYITLSHFGINIDESEIYNYLFEDMSDY
                     YPSYFKKYNQSEVKHYLHDIQKSYLKSRGN"
     gene            15141..15866
                     /locus_tag="O6Y56_000743"
     CDS             15141..15866
                     /locus_tag="O6Y56_000743"
                     /EC_number="2.1.1.163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000774689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="demethylmenaquinone methyltransferase"
                     /protein_id="HDB5574027.1"
                     /translation="MADNKANKEQVHRVFQNISKKYDRLNNIISFEQHKVWRKRVMKD
                     MGVRKGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLEVGKEKTASMENVKL
                     VHGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKPGGMVVCLETSQPTLP
                     VFKQMYALYFKFVMPIFGKLFAKSKEEYEWLQQSTFNFPGKEELKRMFEEAGFINVRV
                     RSFTGGVAAMHLGYKEKDNTKGD"
     gene            15868..16827
                     /locus_tag="O6Y56_000744"
     CDS             15868..16827
                     /locus_tag="O6Y56_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002463052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDB5574028.1"
                     /translation="MAKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVR
                     PAFVILSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWD
                     QTTAILTGNFLLALGLEHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIIN
                     YLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTE
                     KKLGKPVGSDLLNGHITLPILLEMRKNPDFKLKIEQLRRDSERKEFDECIQIIRKSDS
                     IDEAKSVSSKYLSKALDLISELPDGHPKSLLLSLTKKMGSRNT"
     gene            16919..17368
                     /gene="ndk"
                     /locus_tag="O6Y56_000745"
     CDS             16919..17368
                     /gene="ndk"
                     /locus_tag="O6Y56_000745"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002463054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDB5574029.1"
                     /translation="MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPIEL
                     AETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIR
                     GDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE"
     gene            17578..17778
                     /locus_tag="O6Y56_000746"
     CDS             17578..17778
                     /locus_tag="O6Y56_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574030.1"
                     /translation="MKNIISIILGILMFLKLMELLYGAIFLDKPLNPITKIIFILTLI
                     YIFYVLVKELIIFLKSKYNKSA"
     gene            18165..19331
                     /gene="aroC"
                     /locus_tag="O6Y56_000747"
     CDS             18165..19331
                     /gene="aroC"
                     /locus_tag="O6Y56_000747"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDB5574031.1"
                     /translation="MRYLTSGESHGPQLTVIVEGVPANLEVKVEDINKEMFKRQGGYG
                     RGRRMQIEKDTVEIVSGVRNGYTLGSPITMVVTNDDFTHWRKIMGAAPISDEERENMK
                     RTITKPRPGHADLVGGMKYNHRDLRNVLERSSARETAARVAVGALCKVLLEQLDIEIY
                     SRVVEIGGIKDKDFYDSETFKANLDRNDVRVIDDGIAQAMRDKIDEAKNDGDSIGGVV
                     QVVVENMPVGVGSYVHYDRKLDGRIAQGVVSINAFKGVSFGEGFKAAEKPGSEIQDEI
                     LYNTELGYYRGSNHLGGLEGGMSNGMPIIVNGVMKPIPTLYKPLNSVDINTKEDFKAT
                     IERSDSCAVPAASIVCEHVVAFEIAKALLEEFQSNHIEQLKQQIIERRQLNIEF"
     gene            19357..20421
                     /locus_tag="O6Y56_000748"
     CDS             19357..20421
                     /locus_tag="O6Y56_000748"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDB5574032.1"
                     /translation="MKLQTTYPSNNYPIYVEHGAIKYIGTYLNQFDQSFLLIDEYVNQ
                     YFANKFDDILLYENVHKVIISAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGAT
                     GDFAGFVAATLLRGVHFIQVPTTILAHDSSVGGKVGINSKQGKNLIGAFYRPTAVIYD
                     LDFLKTLPFEQILSGYAEVYKHALLNGESATQDIEQHFKDREILQSLNGMDKYIAKGI
                     ETKLDIVVADEKEQGVRKFLNLGHTFGHAVEYYHKIPHGHAVMVGIIYQFIVANALFD
                     SQHDINHYIQYLIQLGYPLDMITDLDFETLYQYMLSDKKNDKQGVQMVLIRQFGDIVV
                     QHVDQLTLQHACEQLKTYFK"
     gene            20431..21729
                     /gene="aroA"
                     /locus_tag="O6Y56_000749"
     CDS             20431..21729
                     /gene="aroA"
                     /locus_tag="O6Y56_000749"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDB5574033.1"
                     /translation="MVNEQIIDISGPLMGEIEVPGDKSMTHRAIMLASLAEGVSTIYK
                     PLLGEDCRRTMDIFRLLGVEIKEDDEKLVVTSPGYQSFNTPHQVLYTGNSGTTTRLLA
                     GLLSGLGIESVLSGDVSIGKRPMDRVLRPLKSMNANIEGIEDNYTPLIIKPSVIKGIN
                     YKMEVASAQVKSAILFASLFSKEATIIKELDVSRNHTETMFRHFNIPIEAEGLSITTT
                     PEAIRYIKPADFHVPGDISSAAFFIVAALITPGSDVTIHNVGINPTRSGIIDIVEKMG
                     GNIQLFNQTTGAEPTASIRIQYTPMLQPITIEGELVPKAIDELPVIALLCTQAVGTST
                     IKDAEELKVKETNRIDTTADMLNLLGFELQPTNDGLIIHPSEFKTNATVDSLTDHRIG
                     MMLAVASLLSSEPVKIKQFDAVNVSFPGFLPKLKLLENEG"
     gene            21736..22980
                     /locus_tag="O6Y56_000750"
     CDS             21736..22980
                     /locus_tag="O6Y56_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000389518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574034.1"
                     /translation="MEDIYKLIDDINLQKLENLDSRVNEAITTDNDDALFILGETLYN
                     FGLMPQGLEVFRVLYHKYPDESELLIYFIEGLMSENQTDEALEYLSYVEPSPEKLMLE
                     ADLYQQINMMEVAIDKLQEALELEPNDPIIHFALAEMLYYDGQYLRATSEYETVLETG
                     EYQVNGVNLFSRMADCSLQSGNYSDAIRLYDEINEDEMTSEDYLKKAISYDKNDITQE
                     AIKIMITLLSKDPDYIQGYLYLQSLYENEKNYPDAIETGKEGLRLSHFYKELMYTTGC
                     LEIEHGDANEGVLLLKQALEVDNAYQEPLLILSDLYRNEEDYEAIIELLTYVDEEDLD
                     PTFMWHLAFAYGQEERDKEAQHFFELAYPTMKTNIDFMSDYYFYLIETGQKEQAITIL
                     NQLLELEPSNENWHDELSRLQF"
     gene            22994..23569
                     /locus_tag="O6Y56_000751"
     CDS             22994..23569
                     /locus_tag="O6Y56_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpiB family protein"
                     /protein_id="HDB5574035.1"
                     /translation="MSETLNQIKESFIEYLLFQYRFKSRIAVWVLNYIKVNETKLANI
                     HFVDTKINHHETLEIAEVGSHASAIQFTKHNIKLMNTNEIFDYIANHNCAFDIQIHFA
                     NVSKREQRLDDLIVAQLTESPSYQTYLHDLNSMSIDRHKHALLIDYLLHNIDLSLQMN
                     EKQRFYQLTQILNTLKLVNKHNQFEDLADDD"
     gene            23559..24146
                     /locus_tag="O6Y56_000752"
     CDS             23559..24146
                     /locus_tag="O6Y56_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1405 domain-containing protein"
                     /protein_id="HDB5574036.1"
                     /translation="MTINTFWQYTLYQRSWLMMLLICNILGMIYGYIWYGEQLSHTPW
                     QFKIFVPDSPTAILFLVISISLILIRKQNSIIDALAFVTLFKYGIWAVIMNILFIIEQ
                     GDITVNGLVLMFSHSIMAVQAIYFYPRFKRSMIGIIVAMTWVFLNDYIDYFYLQFPYY
                     DFITTHVWQIGVLSCCLSVFGLLLYIELNKLLKCK"
     gene            24218..24898
                     /locus_tag="O6Y56_000753"
     CDS             24218..24898
                     /locus_tag="O6Y56_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002456509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metallopeptidase"
                     /protein_id="HDB5574037.1"
                     /translation="MIIYFVILMVLPLWAQHKVKSNYEKYSQVRSTSGKTGREVALEI
                     LHANGIYDVEVVKGEGFLTDHYDPKKKVVSLSPANYDRPSVAGTAIAAHEVGHAIQDH
                     QGYWFLRFRAALVPVANLGSSLSYMIIMLGIILTAIGSAFGSTALWIGAGLMSLAVLF
                     SIVTLPVEFDASSRAMKQITALNIVNEKEYKHARKVLSAAAMTYVAATAVAVAELVRI
                     ILIARSSD"
     gene            25234..25551
                     /locus_tag="O6Y56_000754"
     CDS             25234..25551
                     /locus_tag="O6Y56_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HDB5574038.1"
                     /translation="MKSMVEMQREVDEYIGQFKTGYFSPLANLARLTEEVGELAREIN
                     HTYGEKKKKDSEEANTIKAELGDNLFVLLCLANSMGIDMTESFNETMEKFNTRDKNRF
                     ERK"
     gene            25809..26951
                     /gene="bshA"
                     /locus_tag="O6Y56_000755"
     CDS             25809..26951
                     /gene="bshA"
                     /locus_tag="O6Y56_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-alpha-D-glucosaminyl L-malate synthase
                     BshA"
                     /protein_id="HDB5574039.1"
                     /translation="MKIGITCYPSMGGSGIIATELGIKLAERGHEVHFITSNIPFRIR
                     KPLPNMIFHQVEVNQYAVFQYPPYDITLSTKIAEVIKEYDLDLLHMHYAVPHAICGIL
                     AREMSGKDIKIMTTLHGTDITVLGYDHSLQGAIKFGIEKSDIVTSVSKSLAQETHEII
                     ETNKEIIPIYNFVRENEFPTKHNTALKSQFGIAPDEKVLIHVSNFRQVKRIDTIIETF
                     AKVREKIPSKLILLGDGPELVPMRQKTKELNVEEDVLFLGKQDCVSEFYQLSDLVLLL
                     SEKESFGLTLLEAMKTGVVPIGSNAGGIKEVIKHGETGFVVDVGDSDSASDYAIRLLE
                     DKVLYNKLQKNMLADIAERFGSELITDQYEYYYQKMLNEHNKSKGE"
     gene            26956..28158
                     /locus_tag="O6Y56_000756"
     CDS             26956..28158
                     /locus_tag="O6Y56_000756"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499992.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HDB5574040.1"
                     /translation="MDKSLFEQARPILEQIQDNGFEAYYVGGSVRDYVMGRNIHDIDI
                     TTSATPDEIESIFSHTIPVGKEHGTINVVFNDENYEVTTFRAEEDYVDHRRPSGVTFV
                     RDLYEDLQRRDFTMNAIAMDTAYKLYDYFDGQQDINNRIIRTVGIAAERFQEDALRMI
                     RCLRFQSQLSFDIATETFEAMRTQMADIKFLSIERIVIELTKLMRGINVEESFNHLKS
                     MKAFNYMPYFEHLDMNQINVTEPIDLELLIAIVSVKFDINYSLKPLKLSNRQVKDINQ
                     YIQIMNALPSIITKEQLKMFVYDYDTNLIKNVMVAADVLKANDIQGHEPLIVNLQTID
                     ETLLHLPMHNRKDMMVNGGVLMAHLNAKSGPWLKDVLRQIEIAIVTGKVSNEETEILK
                     WVDNHVKI"
     gene            28145..29116
                     /locus_tag="O6Y56_000757"
     CDS             28145..29116
                     /locus_tag="O6Y56_000757"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDB5574041.1"
                     /translation="MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLK
                     LEGCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSL
                     VGNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALG
                     IRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLE
                     DFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLPFSEIREEYIAASN
                     IWNRTLLFTENDKQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF"
     gene            29140..31833
                     /locus_tag="O6Y56_000758"
     CDS             29140..31833
                     /locus_tag="O6Y56_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HDB5574042.1"
                     /translation="MGMATYAVVDLETTGNQLDFDDIIQIGITFVRNNQIIDTYHSMI
                     RTNLEIPPFIQALTSIEENMLQQAPYFNQVAQEIYDKIKDCIFVAHNVDFDLNFIKKA
                     FKDCNIQYRPKKVIDTLEIFKIAFPTDKSYQLSELAEAHGITLANAHRADEDAATTAK
                     LMILAFEKFEKLPLDTLKQLYYLSKQLKYDLYDIFFEMVRQYDAKPLDKSYEKFEQII
                     YRKQVDFKKPTTNYNGSLKSLYSKAVDQLGLTYRPQQLYLAETILDQLMHSEKAMIEA
                     SLGSGKSLAYLLAALMYNIETGKHVMISTNTKLLQSQLLEKDIPAMNEALNFKINALL
                     IKSKSDYISLGLISQILKDDTSNYEVNILKMQLLIWITETPSGDIQELNLKGGQKMYF
                     DQKIETYVPARHDVHYYNFIKRNAQNIQIGITNHAHLIHSDVENSIYQLFDDCIVDEA
                     HRLPDYALNQVTNELSYADIKYQLGLIGKNENEKLLKAIDQLEKQRILEKLDIAPIDI
                     FGLKASMNEIHELNEQLFSTIFTIINDSDVYDDDIHRFHNVFTFETKDILKDLHAIID
                     KLNKTLEIFNGISHKTVKSLRKQLLYLKDKFKNIEQSLKAGHTSFISIKNLSQKSTIR
                     LYVKDYAVKDVLTKQVLEKFKSLIFISGTLKFNHSFDAFKQLFNKDVHFNTFEVNTSL
                     QSAKNTSVFIPSDVASYQYKNIDEYVASIVSYIIEYTTITSSKCLVLFTSYKMMHMVQ
                     DMLNELPEFEDYVVLTQQQNQNYKIVQQFNNFDKAILLGTSTFFEGFDFQANGIKCVM
                     IAKLPFMNKHNAKYWLMDSEFTSTFKEYVLPDAVTRFRQGLGRLIRNENDRGIIVSFD
                     DRLINSNYKNFFEQTLENYRQKKGDIQQFGKLLRQIQKKKK"
     gene            32155..33447
                     /gene="asnS"
                     /locus_tag="O6Y56_000759"
     CDS             32155..33447
                     /gene="asnS"
                     /locus_tag="O6Y56_000759"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HDB5574043.1"
                     /translation="MKTTIKQAKDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQ
                     GVVVKSEVDEEVFKLAKEITQESSLYVTGTITEDNRSDLGYEMQVKSIEVISEAHDYP
                     ITPKNHGTEFLMDHRHLWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTAS
                     APEGTSELFHTKYFDQDAFLSQSGQLYLEAAAMAHGKVFSFGPTFRAEKSKTRRHLIE
                     FWMIEGEMAFTNHAESLEIQEQYVTHVVKSVLENCKLELKILERDTSKLEKVATPFPR
                     ISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHYDLPVFITNYPTKIKPFYMQPNP
                     ENEETVLCADLIAPEGYGEIIGGSERVDDLELLEQRVKEHGLDEEAYSYYLDLRRYGS
                     VPHCGFGLGLERTVAWISGVEHVRETAPFPRLLNRLYP"
BASE COUNT        12336 a         4697 c         6120 g        10452 t
ORIGIN      
        1 ggataacttc ggtctaaaag ttaaagctac gaatgttgta ggtagtggcg acggcgtaga
       61 agtatacgtg cattgtgatg accacgatat cgtatttaat gcgagtattc catttgacaa
      121 atcaattatt gacagtgata gctcattaag aagtgaggat aaaggcgatg atatgagtac
      181 tttagttggt acagtgttga gtggctttga atatcgagca cataaggaag agttggataa
      241 tttaacagaa gttttaaaag aatataaaag taaatataaa tatactggtt atactgaaaa
      301 tgcaattatg aaaacgcaga atagtggttt tagaaatgag tattattatt tgactgcaat
      361 tccatatact ttagatgaat ataaaaggta ttttcaaccc ttaatcaaag aggatgataa
      421 gtcttttagg gacggtatga gaaactcaaa aaaacaactt aaagataaat cacgtccata
      481 tgttgttaca actttattta gtactaaaga taattttact aaagataata caatagacga
      541 gatgattgat ttttctgaag tactaaaaaa gaaaaagaat attcctcatg atttgaatgt
      601 ttctcttcaa atttctaata aatatataaa tacaacaaga cctaattata gtaagaagga
      661 tgtaatagaa gtaggtgtat ttaatcatga aaaaactaac acgaatgatt aaactaataa
      721 caataaaaag gtaggttcaa aaaaccgtcc caaaatccat ctcaaaaaac aatcaagcaa
      781 acaacattcc aaccaatgaa cgcaaatcac caatgtatca ctctccaatt acgtaactat
      841 gatctaatta aagcatagtt attgaggttt tgtgatatat agtataaaat taatgagaat
      901 taaatttaat aatgtaaaat tcatcttcgg ggtcgggtgt aattcccaac cggcagtaaa
      961 taaagcctgc gacctgctag tatgtatcat attagtggct gatctagtga gattctagag
     1021 ccgacagtat agtctggatg ggagaagatg gaggtttttt gttgtgcaat aatcctccta
     1081 ttcttacgag atgaatggaa ggagaaaatt gaatatgcaa caaaataaac gtcttatcac
     1141 aataagtatg ttgagcgcga ttgcgtttgt gttaactttt atcaagtttc ctataccatt
     1201 tttgccacca tacttaactt tagattttag tgatgtaccg tcactactag ctacatttac
     1261 gtttggacca gttgccggta tcatagttgc actggttaaa aatttattga actacttatt
     1321 tagtatgggc gatccagttg gaccatttgc taatttttta gcaggcgcaa gtttcttatt
     1381 aactgcttac gccatctata aaaataaacg ttcaacaaaa tctttgatta ctggattaat
     1441 cattgcgaca atcgttatga ctatcgtgtt gagtatcttg aactatttcg ttctattacc
     1501 tttgtacggt atgatattta acttagctga tatcgcaaat aatcttaaag taatcattgt
     1561 ttcaggaatt ataccattca atattattaa aggtatcgtc atttctattg tatttatttt
     1621 actatataga aggcttgcga atttcttgaa aagaatttaa tcaaattaaa gcaaaataat
     1681 atacacataa taataaaaag caggtgacta tcaataaacg atagcttgcc tgctttttct
     1741 atggaacatt tgtctaaaaa atcaattatt caaattttaa agcgtcccca tcaaatgatt
     1801 cgtctgcaat tttaatagaa tctgtagggc atccatcaat tgcatcttcc atatcttcat
     1861 ataattcctc aggcacttct gcagtacctt ggttatcgtc aaggattacg aaagcaatac
     1921 cttcgtcgtc gtaatcatat atatctggcg ctgctgcacc gcatgcacca catgcaatac
     1981 aagtatccat atcaacgatt gtatattttg ccaatgtctt cgcctccttt gataaaaatg
     2041 ctaaaatagt aatgtgacta aaattttaga cagcatcatt tttattttca aattatccgt
     2101 tttacagagt gagggttaaa cttgcaacac attataaaaa cagcattaca acaaacattt
     2161 aactataaaa caaataaaag tatttacaat atcttagttg gaaagaaatc tcaccaaacc
     2221 ttttttgacg cttgtagtca acaacagttg tcattatatc acagtttacc actattaaaa
     2281 tatccatctt ttgagctatt tttagaaaat ataactgaat ttaatgctga aatggaaatc
     2341 atgttgcatc ctagatatac atttgaaagt atggggcaaa catttcaagc aattcaacta
     2401 ttagtgcaaa ccatgtctaa tactatgcag caagattttc gtttcgtacc aatctctcaa
     2461 aataataaga tacaagaaac tgtaaagatt gtctataact acattaaaga aaacaaacta
     2521 caaattgatt ttgaaaatga actacataac ttatttaaag caataacttt aaaagggcca
     2581 tgttacttac attattattt gcaaggctat gatgaaccaa tgtatacgag acagcaagtt
     2641 agtttaatag aaaaattatc tcaacagcaa ttgtttgaat acgaaatgaa taatttagtg
     2701 acaatgatgt ttgaattaga aagtggagaa tatacgattt tatcaaaaat aataatgaaa
     2761 cctacattat taaatcaaac ttatattaca tatacaagat tgcttgaaca attcacgatg
     2821 gaagatatag cggctcaaca acaagttaaa atcaatacta tcgaagatca tgtacttgaa
     2881 atcttaatca aaggttacat gtctaattac gatgattatg ttgaacaaga agatcaactg
     2941 caatttttga atttttatca acagcatcgt ggcgaacgat taaaatttta caaagaacaa
     3001 tttgacacgt tatcatattt tcaattaaaa gtattaatcg ttggatttga aagaggtgat
     3061 ctgaatgttg catgatattt tacgaaacaa atttggtttc gagagtttta aaccgggaca
     3121 acaggaaatt atagaaagta taatgtctca acaacacact ctaggtattc ttccaactgg
     3181 aagtggaaag agtttgtgtt atcaaatacc tacgtattta tcaggtaagc cgacattaat
     3241 tatctcaccg ctaatatctt taatggatga ccaagttatg cagttgaaaa taaatggaga
     3301 aaaacgtgta acatgtattc actctggtat ggatgaaatt gagaaaaagc ataatattaa
     3361 atgtttacga catagccgct tcatctttct aagtccagaa tttctcctgc aaccggcaaa
     3421 ttttaaatta atttccacga tagactttgg catgattgta ctagatgaag cacattgttt
     3481 atctgaatgg ggctacgact tcagaccaca ttacgcgcta ataggaaaag taacaaagca
     3541 ttttaaagaa gcggtagtct tagcattgac agcaactgca ccaccgcatt tacaagatga
     3601 tttgacggaa atgttagcga ttcaattcaa cgttattaaa actacaatga atcgcccaaa
     3661 cataagcttt aagcatctta attttaatga tgatgaagat aaaattgagt ggttactgcc
     3721 gtttctacaa cagtcgggac caacgattat ttatgtctca tcgaaaaaga tgtgtctgaa
     3781 tttagcgcaa cttatttatg attcaggttt tcttacaggc atttatcatg gtgatatgaa
     3841 ttatcaagag cgacacacag ttcaacaaca atttttaaat aatgatattc cgattatagt
     3901 cgcaacgagt gcttttggta tggggattaa taaaaaagat attcgcacaa tcattcactt
     3961 tcatctttca acaagtcctt ctaactacat tcaagaaatt ggccgtgcgg gtcgcgatgg
     4021 tgaactaagt caggcaatta gtttattcca accggacgat aaatatattt tagaaacgtt
     4081 attatttgca gatatgataa cagaagaaga tgtacaaaat ttcgaaatag gagaattttt
     4141 agcacccgat aagcaagacg ttttgacaac gttgcattca ttctacagta tcggcgcctt
     4201 gaaacaaata tttaagcaat cgtttaaacg aaagcaatta ggattctttc gcatgattgg
     4261 ctattgcaaa ttggatcaat gtagacggaa gtatttatta gaatttttcg gtgaatatcc
     4321 accgacacaa gatcgatgtt gtgacaatga ttctaatata actgatatcg caattttaaa
     4381 taagaagaag gtaattagaa gtattggatt tgatgaaaag ttgcaaaatt tatttctcag
     4441 atagtattac tttactaaaa gaaaattgac aagctataat tagtgtatac acaattgaaa
     4501 aatgattgaa ataattttga aaaatataca taaacttgtg tcataagggt atattttatg
     4561 taaaatcatt gtaatagaat agaaaggaag atggctatgt ctaataattt taaagatgac
     4621 tttgaaaaaa atcgtcaatc gatagacaca aattcacatc aagaccatac ggaagatgtc
     4681 gaaaaagacc aatcagaatt agaacatcaa gatacaacag agaatacgga gcaacagttc
     4741 ccaccaagaa atgcccaaag aagaaaaaga cgccgtgatt tagcaacaaa tcataacaaa
     4801 caacatcacg atgaatcaca agcatctgac gacaatgttc aaaatgaggc tggcacaata
     4861 gatgatcgtc aagtcgaatc atcacacagt actgaaagtc aagaacctag ccatcaagac
     4921 agtacacctc aacatgaaga gggatattat aataagaatg cttttgcaat ggacaaatca
     4981 catccagaac caatcgaaga caatgataaa cacaagactg ttaaagatgc agaaaataac
     5041 actgagtatt caacagtttc tgataagagt gaagctgaac aatctcagca acctaaacca
     5101 tattttgcaa caggtgctaa ccaatcagaa acatcaaaag atgaacatga taatgattct
     5161 gtaaaacaag atcaagctga acctaaagaa catcatagtg gtaaaaaagc agcagcaatt
     5221 ggtgctggaa cagcgggtgt tgctggtgca gctggtgcaa tggctgcttc taaagctaag
     5281 aaacattcaa atgacgctca taacaaaagt aattctggca aggcgaataa ctcgactgag
     5341 gataaagcgt ctgaagacaa gtctaaagat catcataatg gtaaaaaagg tgcagcaatc
     5401 ggtgctggaa cagcaggttt agctggaggc gcagcaagta aaagtgcttc tgccgcttca
     5461 aaaccacatg cctctaacaa tgcaagtcaa aaccatgatg aacatgacca tcatgacaga
     5521 gataaagaac gtaaaaaagg tggcatggcc aaagtattgt taccattaat tgcagctgta
     5581 ctaattatcg gtgcattagc gatatttgga ggtatggcat taaacaatca taataatggt
     5641 acaaaagaaa ataaaatcgc gaatacaaat aaaaataatg ctgatgaaag taaagacaaa
     5701 gacacatcta aagacgcttc taaagataaa tcaaaatcta cagacagtga taaatcaaaa
     5761 gaggatcaag acaaagcgac taaagatgaa tctgataatg atcaaaacaa cgctaatcaa
     5821 gcgaacaacc aagcacaaaa taatcaaaat caacaacaag ctaatcaaaa tcaacaacag
     5881 caacaacaac gtcaaggtgg tggccaaaga catacagtga atggtcaaga aaacttatac
     5941 cgtatcgcaa ttcaatacta cggttcaggt tcaccggaaa atgttgaaaa aattagacgt
     6001 gccaatggtt taagtggtaa caatattaga aacggtcaac aaatcgttat tccataatat
     6061 aactatatta attgtaactg aactgctata tacaaacgtg catattataa agtttctcta
     6121 aatattatag agaacttaaa ttgcgcttat aagtatgtag cggttttttc attttcaaag
     6181 tttgttattt aacaaggtgt tgtctcgaat attggcatat caattaaact ttttacatag
     6241 tcatcaaaaa gataaaacac cacaatcaac aaatttaaca aggatgaata aaaaataaat
     6301 caacatatta aattgtagtg ttattcaact ccatggctaa caattctcta tgcacattaa
     6361 acaaattgtc aaaaatatat cataaatctt caagcacaga cttagcgcat caatcactga
     6421 actgttataa tagtttggga ttaaaggagg ccgaaacaat gcaaaaagtt gaaagtatca
     6481 taattggtgg agggccatgc ggattaagtg cggctattga acaaaaaaga aaaggtattg
     6541 ataccttaat tattgaaaag ggtaatgtcg tagaatcaat ctacaattat cctactcacc
     6601 aaacattttt ctcatcaagt gataaattaa gtattgggga cgtaccgttt atcgttgaag
     6661 aaagtaaacc aagacgtaat caagcgctag tttattaccg agaagttgta aaacatcatc
     6721 aattaaaagt aaatgcattt gaagaagtat taactgttaa aaaaatgaat aataaattta
     6781 ctattactac gacgaaagat gtttatgaat gtcgattttt aacaatcgcg acaggctatt
     6841 atggtcagca taatacatta gaagttgaag gtgcggattt acctaaagtg ttccattatt
     6901 ttaaagaagc acatccgtat tttgatcaag atgttgttat tattggtggt aagaattcgg
     6961 ctatcgatgc tgctttggag ttggaaaaag ctggtgctaa cgtgacggtt ctatatcgtg
     7021 gtggagatta ttcgccttca attaaaccgt ggatacttcc aaatttcaca gcattagtaa
     7081 atcatgaaaa aattgacatg gaatttaatg ctaatgttac ccaaataact gaagatactg
     7141 tgacttatga agtaaatggt gaaagtaaaa caatacacaa tgattatgta tttgcgatga
     7201 ttggttatca tcccgattat gaatttttaa aatctgtagg cattcaaatt aatacaaatg
     7261 aatttggaac agcgcctatg tataataaag aaacatacga aacaaatatc gaaaattgct
     7321 acattgcagg tgtgattgct gcagggaacg atgcgaatac catttttatt gaaaatggta
     7381 agttccacgg tggcattatt gctcaaagca tgctagctaa gaaacaaacg cccttagaat
     7441 cataaaaata aaggtctacg tactaaataa cttagtttta caacgactga cattcatgat
     7501 atgtcaaatg aggttgatga ctaattattg tacatagacc tttttatgtt acgtaatcat
     7561 tataattcaa aatatgattt gatttcagct ttgtctaaat tattgcttaa cgcgactaat
     7621 aattttaatc ttgcttttgg accattcaaa ccgttagaaa aaataaaacc ttgttgtgcg
     7681 agttggtaac caccaccatc gtatgcgtaa gttggactca caataccatt aaaggaacgt
     7741 gaaactagca caataggtat atttaaatat actaattgtt gaatgccttc taatgcgctt
     7801 ggaggtatgt tgccttgtcc taacgcttca ataaccatac catcgatacc ttcacgacta
     7861 taaaaactaa aaatgtcacc tggcataccc atatatgctt ttactaatgg tacatttagt
     7921 ttctcattga cattttccaa tgcttgttgg cgatatggca tatgatggaa ttgcacacga
     7981 tcctttgtca atacacctag cggaccatga tttggacttt gaaatgtgtt tgtattagac
     8041 gtatgtgttt tggtaacatt acgcgccgta tgaatttcat cattaaatac aaccatgacg
     8101 cctttatgac gggccttttc atcagaggca acgcgaatag cggaaatata attatataat
     8161 ccgtcagaac caatttcatt agacgagcgc attgcgccag taataacaac aggttgctcg
     8221 atacctaata ttaaatcaag taaaaaggca gtttcttcta acgtatcggt accatgcgtg
     8281 ataacgaaac catcataata tttatttgtt actgcttcta aaataatatc ctttaattgt
     8341 ttaacatgtt ggattgtcat atgaggtgat ggtacattaa aaggatttaa ttcatctatt
     8401 tgtgcatatt gatttatgac atcttgatgc attgaaatag ggttgatatc atttgttact
     8461 actttattag attggtcttg tgacatacta atggtgccac cagtatgaat aacaagtaga
     8521 tgtttcatat atttcctcct atatttcatt tacctaatta tgataaaata ttattcataa
     8581 aacgacaagg aagggaaatg acgcatgaaa gccattaata ttgcattaga tggtccagct
     8641 gctgccggaa aaagtacaat tgcgaaacgt gtagccagcg aactatcaat gatttatgtc
     8701 gatacaggag caatgtatcg cgcattaaca tacaaatatt taaaattaaa caaaactgag
     8761 gactttgcaa aactagttga ccaaacaaca ttagatttaa cttataaagc agataaaggt
     8821 caatgtgtca ttttagataa cgaagatgta acagactttt tgagaaataa tgatgtgacg
     8881 caacatgttt catacgttgc atctaaagag ccagtacgtt cattcgccgt taaaaaacaa
     8941 aaagagttag ctgcagaaaa aggtatcgta atggatggcc gcgatatcgg aactgtagtg
     9001 ctaccagatg cagatttaaa agtatatatg attgcatcag ttgaagagcg agcagtaaga
     9061 agatataaag ataatcaatt aagaggtatc gaatcaaatt ttgaagattt aaaacgtgat
     9121 attgaagcac gtgatcaata tgacatgaac cgtgaaatat cgccattaag aaaagcagat
     9181 gatgcagtga cattagatac gacaggcaag acgattgaag aagttactga cgaaatttta
     9241 gcgatggtga atcaaattaa ataatctagt aagtcataac tatttatttg taatgggcaa
     9301 cgcttaatgc atatacaaat tgaatgtgct gttaatgatt tactcaaatt aaaaggtgat
     9361 ttttattcaa cgatgaatga aagttgcctt tttatttttg gtaaaagtta atgcatcagt
     9421 caattgtgta agtttttcaa aaagtaaaca gaaataataa agataaatta ttagaattcc
     9481 aaaaataatt cattacattc ataaagcatt ttacaaatgg taagaaaatg agtgttacaa
     9541 atctaagaat tgcaaaagaa gctgatttag tcacaaaaaa agtcctatgt aataattcga
     9601 gaaagatgca ctatatacgg ttttcttact attcaattgt aaaagttgct tatttgcgtg
     9661 gctttttgtt ttataaaagt ataaaatttt actataatat atcttgtaga gaacaatgaa
     9721 atgacagact tataaaacaa aatagtgagc tatgctaatt tttatacaaa aatatgtata
     9781 aacatagcgg actttattac ttgtttgaat atatggttgt aataaatata tgtccaaata
     9841 atacacagaa tgagattaag tgacatattt atggatacaa ctaatttact aaatgtaata
     9901 aaggttgaat ttcttgacaa ttctgtcagt ttataagatg ttataaatat gtagtgtata
     9961 aggaggcaaa caagatgact gaagaattca atgaatcaat gattaacgat attaaagaag
    10021 gtgacaaagt cactggcgag gtacaacaag ttgaagacaa gcaagttgtt gttcatatca
    10081 acggtggtaa atttaatggg attattccta ttagtcaact atctacgcat catattgata
    10141 gcccaagtga agttgtaaaa gagggcgacg aagttgaagc atatgtcact aaagttgagt
    10201 ttgatgaaga aaatgaaact ggagcttaca tcttatctag aagacaactt gaaactgaga
    10261 agtcttatag ttatttacaa gaaaaattag ataataatga aatcatcgaa gcgaaagtaa
    10321 cagaagtagt taaaggtggt ttggttgttg atgtaggaca aagaggtttt gttccggctt
    10381 cactaatttc aacagacttc attgaggatt tctctgtgtt tgatggacaa acaattcgta
    10441 ttaaagttga agaattggat cctgaaaata atagagtcat tttaagccgt aaagcagttg
    10501 aacaagaaga aaacgatgct aaaaaagatc aattattaca atctttaaat gaaggcgatg
    10561 ttattgatgg taaagtagcg cgtttaactc aatttggtgc atttatagac attggcggtg
    10621 tcgatggttt agtgcatgta tctgaacttt ctcacgaaca tgttcaaaca ccagaagaag
    10681 tagtttcaat tggtcaagat gttaaagtta aaattaaatc tattgataga gatacagaac
    10741 gtatttcatt atcaatcaaa gatacgttac caacaccttt cgaaaatatt aaaggtcaat
    10801 tccgcgaaaa tgatgtcatt gaaggtgtcg tagtaagatt ggcaaacttt ggtgcatttg
    10861 ttgagattgc accaggtgta caaggacttg tacatatttc tgaaattgca cacaaacaca
    10921 ttggtacgcc aggtgaagtg ttagaacctg gtcaacaagt aaatgttaaa atattaggta
    10981 ttgatgaaga gaatgaaaga gtatcactat ctattaaagc aacattacca aacgaagatg
    11041 ttgttgaaag tgatccttct acgactaagg cgtacttaga aagcgaagaa gaagataatc
    11101 caacaattgg cgatatgatt ggtgataaac ttaaaaatct taaactataa tatttaatag
    11161 tcaactccac atgtttatga ttgcatgtgg agtattttta tgtaaccaaa tatattcgga
    11221 atgataacgt ggacaaatta aactaagtgt tttataagat aaagttttaa gtgctgattt
    11281 ttatcattac agtaataaac tcattttgaa tacacagtct catgtgatat tattaaaaag
    11341 atataagaaa gagaggaagt tagcttatga ctaaacctat agtagctatt gtaggtaggc
    11401 ctaatgtagg taaatctaca atttttaata gaatagttgg agaacgtgtt tcgattgttg
    11461 aagatacgcc aggtgtaaca cgagatcgta tttattcttc aggtgagtgg ttaacacatg
    11521 atttcaatat tattgataca ggtggtattg aaattggtga tgcaccattc caaacacaaa
    11581 ttagagcgca ggcagaaatc gccatagatg aagcggatgt tattattttt atggttaacg
    11641 tgcgtgaagg attgacacaa agcgatgaaa tggtcgctca aattttatac aaatctaaaa
    11701 aaccggtcgt attagcggtt aacaaagtag ataatatgga aatgcgtaca gacgtgtatg
    11761 atttctattc attaggattt ggtgaaccgt atccgatatc agggtcacat ggtttaggtc
    11821 ttggtgactt gttagatgca gttgtttctc attttggtga agaggaagaa gatccttatg
    11881 atgaagatac aattcgacta tccattattg gacgaccaaa cgtaggtaaa tcaagtttag
    11941 taaatgctat tttaggtgaa gatcgcgtta tcgtttctaa tgttgcaggg acaaccagag
    12001 acgctattga tacagagtat agttatgatg gacaagatta tgttttaatc gatactgctg
    12061 gtatgcgtaa aaaaggaaaa gtatatgaat caactgagaa atattcagta ttaagagctt
    12121 taaaagcgat tgaacgttca aatgttgttt tagtggttat tgatgcagaa caaggcatta
    12181 ttgaacaaga taaacgtgtt gcaggttatg cacatgaaca aggtaaagca gtcgtgattg
    12241 tcgtaaataa atgggatact gtggaaaaag atagtaaaac gatgaagaaa tttgaagatg
    12301 aagtacgtaa agaattccaa tttttagatt atgcacaaat tgcttttgtg tctgctaaag
    12361 aacgcacaag attacgtaca ttattccctt acattaatga agcaagtgaa aaccataaaa
    12421 aacgtgttca aagttcaact ttaaatgaag tcgttactga tgcaatttcc atgaacccta
    12481 caccaacaga caaaggtaga cgtttgaatg tcttttatgc aacacaagtt gctattgaac
    12541 caccgacatt tgttgtattt gttaatgatg tagaattaat gcatttttct tataaacgct
    12601 atttagagaa tcaaatccgt gccgcttttg gttttgaagg tacaccaatt catattatag
    12661 ctcgaaagag aaattaacga ttgggggata acaatgacta aaattaccgt ttttggtatg
    12721 ggaagttttg ggacagccct tgccaatgtt cttgcagaaa atggacatga tgttttgatg
    12781 tggggtaaaa atcaagatgc tgttgatgaa ttaaatacat gtcatacaaa taaaaagtat
    12841 ttaaaatacg caaaattaga cgttaacatc atcgctactt cagatatgac caaagcaatt
    12901 caatttgcag atatttactt aatggcttta cctactaaag caatgcgaga agttgctact
    12961 caaattaatg ataagctgac atctaaaaag acttttatac atgttgctaa aggtattgaa
    13021 aatgggacat ttaaacgtgt gtcagaaatg attgaagatt ctattttacc tgaatataat
    13081 gcaggtattg gcgtgttgtc agggccaagt catgcggaag aagttgtagt caagcaacca
    13141 actacagttg ctgcttcatc aaaagataaa aatgtaagta aattaacgca agatttattt
    13201 atgaatgatt atttgcgtgt gtacacgaat gatgacttga ttggtgttga acttggtggt
    13261 gcattgaaaa atatcatcgc agtagcaagt gggatcgtag ctggaattgg ctacggtgat
    13321 aatgcaaaag ctgcattaat gactcgtggc ttagcggaaa ttagcagatt aggtgaaaaa
    13381 ttaggtgccg atcctatgac atttctaggt ttaggtggta tcggtgactt aatcgttact
    13441 tgcacatcaa cacattctcg aaatttcaca ttaggatata aacttggaca aggtgaatca
    13501 atggatcaag cattatctga aatgaatatg gttgttgaag gtatttatac aactaaatcc
    13561 gtttatcatt tagctaaaga aaaaaatgtg gatatgccaa ttacaaatgc attatataga
    13621 gtattatttg aaaatatttc ggtaaaagaa tgcgtaaaag atttaatgga gcgcgataaa
    13681 aaatctgaat aaaatgtgta ttattacaca tatacagcta ataattacgc aaaatgaata
    13741 gaaatggctt aaattcaacg tttttgccac ataaatgatt gcgatttatg taatgcttgt
    13801 gttaaagttt taccataatg atataaacat atcattatca aacctcagga ggtgaatgtc
    13861 taatgaacaa aacagattta atcaatgcag ttgcagagca agctgattta actaaaaaag
    13921 aagctggttc agcagtagat gctgtattcg aatcaatcca aaactcactt gctaaaggtg
    13981 aaaaagtaca attaattggt ttcggtaact ttgaggtacg tgaacgtgct gcacgtaaag
    14041 gtcgtaaccc tcaaactggt aaagaaattg atatcccagc aagtaaagtt ccagcattca
    14101 aagctggtaa agcattaaaa gatgctgtaa aataatttta cttaaaaagc cctgaataag
    14161 ggctttttat tttgctttta atacttacaa cctgtactta aattgtaatg ttcttctaag
    14221 tttttaatct ttggaacatt cattgtttaa gcgttcaaaa tattacatga cataatagtt
    14281 ttgataaaaa tagcaactac aaaatataca tatgaataat gagattaatt gttagcgttg
    14341 aatttactta aaaggtaacc atgtctacta tagtatttta cgttatttaa aatgatgaat
    14401 aatgtaaatg aagtaagggt tattatgaga attacaaaag ctacataaat tactgttagt
    14461 ttaaattgaa atttaaaaat gataagtaat cttaatgctt caaaagattt taatttctta
    14521 catataatgt taatatgaat agtgataata tcgtgaggtg tagacatgga aacaactgtt
    14581 agcaaattgg aaagacaaat agaagaaaga ttaaagggcg tatcagaata tgaatccatt
    14641 aatattaatc atcggttagg taagttactc gattcatatg atattccaga tgttgccaaa
    14701 gtagcatgcc tcacaattga cacatcaatg agacaccttg atgacattac atataatcat
    14761 ttgtctaagc attccatttt gattggagat ttaattagtg cacattttta tacgctacta
    14821 gcagaaatca atgatttatc atttcaaaat gaaattagta aagcaattgt tgaaattaat
    14881 gaattgaaat cttcattaca tcatcaagct ttaaatgatt atgaaatttc tcaagcaata
    14941 gtaaaaattg aaacactttt cccatatatt acgttatctc atttcggtat caatattgat
    15001 gagtcggaaa tatataatta tttatttgaa gatatgtctg attactatcc atcatacttc
    15061 aagaaatata atcaaagtga agtaaagcat tacttacacg atatccaaaa aagttattta
    15121 aaaagtagag gtaattaagc atggctgaca ataaagcaaa taaagagcaa gtacatcgcg
    15181 tttttcaaaa tatttcaaaa aaatatgaca gattaaataa tattattagt tttgagcagc
    15241 ataaagtatg gagaaaacgt gtcatgaaag acatgggtgt tagaaaaggg acgaaagcat
    15301 tagatgtttg ttgtggtact ggtgattgga caatcgcatt aagcaaagct gtaggaccaa
    15361 caggtgaagt tactggtatt gactttagtg agaatatgtt agaagtagga aaagaaaaaa
    15421 ctgcttcaat ggaaaatgtt aaacttgttc atggtgatgc aatggaattg ccgtttgaag
    15481 acaattcttt tgattatgta acaattgggt ttggattaag aaatgtgcca gactatttag
    15541 tcgcgttaaa agaaatgaat agagtactta aaccaggtgg tatggtggta tgtcttgaaa
    15601 cgagccaacc aactttgcca gtctttaaac aaatgtatgc attatacttt aaatttgtta
    15661 tgcctatttt tggaaaatta tttgcaaaat caaaagaaga atatgaatgg ttacagcaat
    15721 ctacgtttaa ttttcctgga aaagaagagt tgaagcgcat gtttgaagaa gcgggtttca
    15781 taaatgtaag agtacgtagt tttacagggg gcgttgctgc aatgcacctt ggctataaag
    15841 aaaaagataa taccaaaggt gattaacgtg gcaaagttaa acatgaacaa tgaaattaag
    15901 aaagtggaac aacgacttga aaaggcaata aaaagtaaag attctgtatt agaacaggca
    15961 tcattacact tattgtcttc tggtggtaaa agagtacgcc cagcatttgt aattctgagt
    16021 agccaatttg gcaaagatga acaaacgtct gaacaaacgt atcaagttgc agtcgcatta
    16081 gagttaattc atatggcaac acttgttcat gatgacgtta ttgataaaag cgacaagcgt
    16141 cgaggcaagt taaccatatc aaagaaatgg gatcagacaa ctgctatttt aactgggaat
    16201 tttttattgg cattaggact tgaacactta atggccgtta aagataatcg tgtacatcaa
    16261 ttaatatctg aatctatcgt tgatgtttgt agaggggaac ttttccaatt tcaagaccaa
    16321 tttaacagtc aacagacaat tatcaattat ttacgacgta tcaatcgcaa aacagcactg
    16381 ttaattcaat tatcaactga agttggtgca attacatctc aatctgataa agagactgta
    16441 cgaaaattga aaatgattgg tcattatata ggtatgagct tccaaatcat tgatgatgta
    16501 ttagacttca caagtaccga aaagaaatta ggtaagccgg tcggaagtga tttgcttaat
    16561 ggtcatatta cgttaccgat tttattagaa atgcgtaaaa acccagactt caaactgaaa
    16621 atcgaacagt tacgtcgtga tagtgaacgc aaagaatttg acgaatgtat ccaaatcatt
    16681 agaaaatctg acagcatcga tgaggctaag tcagtaagtt cgaagtattt aagtaaagct
    16741 ttggatttga tttctgagtt accagatgga catccgaaat cactactttt aagtttgacg
    16801 aaaaaaatgg gttcaagaaa cacatagtat ttatgaaaag tattgaaagc gctttaccaa
    16861 cctgttaata tataatagta atatacataa acctattaaa cacaggggga tacataaagt
    16921 ggaacgtaca tttttaatga ttaaaccaga cgcagtacaa agaaatctaa ttggtgaagt
    16981 aatttcaaga attgaaagaa aaggactaaa acttgtcggt ggtaaattaa tgcaagtacc
    17041 aatagaactt gctgaaacac attatggtga acaccaaggt aaaccatttt ataatgattt
    17101 aatttcattt attacatcag caccagtgtt cgcaatggta gttgaaggtg aagatgcagt
    17161 taatgtatca agacatatta ttggcagcac caatccttca gaagcttcac caggatcaat
    17221 tagaggtgat ttaggtttaa ctgttggtag aaatatcatt cacggttcag attcattaga
    17281 gtctgctgaa cgtgaaatta atttatggtt taatgaaaat gaaattacta gctatgcttc
    17341 accacgtgat gcttggttat acgaataaaa tataagatat aaacctttac gatttattta
    17401 taaaggtaga aagggttttg ttatgtggtt agtcattatg attatacata acaaggcccg
    17461 ttttttatgt tgtagtaaat tacttgaaaa attttatagt ttttttggta acacgtatta
    17521 aaaagagagg aatattcttt atcaaatgaa actaaacaga gagaaggggt tgttaaaatg
    17581 aagaatatta tttcgattat tttggggatt ttaatgttct taaaattaat ggaattacta
    17641 tatggtgcta tatttttaga taaaccactt aatcctataa caaaaattat ttttatactg
    17701 actctcattt atatttttta tgtattagta aaagaattga ttatattttt gaagtcaaag
    17761 tataacaaaa gcgcttaaca tatgtatatt tttaatatca taattttttt aaacggactg
    17821 attaacttta ttaataatta acagttcgtt cttttgtatt aagaaatgta gtcagtatat
    17881 tatttgctaa agttgcgata cgattatatt aaaacggcta atcattttta attaatgatt
    17941 atatgatgca actgtttaga aattcatgat acttttctac agacgaatat attataatta
    18001 attttagttc gtttaatatt aagataattc tgacatttaa aatgagatgt catccatttt
    18061 cttaattgag cttgaaaaca aacatttatg aatgcacaat gaatatgata agattaacaa
    18121 catattataa tgttatcgtg gaagtatgaa aggagcgagt gtgtatgaga tacctaacat
    18181 caggagaatc acatggacct cagttaacag ttattgttga aggtgtacct gcaaatttag
    18241 aagttaaggt tgaagatatt aataaagaaa tgtttaagcg tcaaggcggt tacggacgtg
    18301 gacgtcgtat gcaaattgaa aaagatacag tggagattgt ttcgggtgta agaaatggtt
    18361 atacattagg tagccctatt acaatggttg ttactaatga tgattttaca cattggcgaa
    18421 aaattatggg tgctgcgcca ataagtgacg aagaacgaga aaatatgaaa cgtacaatta
    18481 cgaagccaag accgggacat gcagatttag ttggcggtat gaaatataat catcgggatt
    18541 tacgaaatgt attagaacgt tcatctgcca gagaaacagc agcacgtgta gctgttggtg
    18601 cattatgcaa agttttatta gaacaattag atatcgaaat atacagtcgt gttgttgaaa
    18661 taggtggcat taaagataaa gatttttatg attcagaaac atttaaagca aaccttgatc
    18721 gaaatgacgt ccgtgtaatt gatgatggca tcgcacaagc aatgcgcgat aaaattgatg
    18781 aagcgaaaaa cgatggtgat tcaatagggg gcgtagttca agttgtagtt gaaaatatgc
    18841 ctgttggtgt aggtagttat gtacattatg atcgtaaatt agatggaaga atagcacagg
    18901 gtgtcgttag tattaatgca tttaaaggtg taagttttgg agaaggattt aaagcagctg
    18961 aaaagcctgg tagcgaaatt caagacgaaa ttctctacaa tactgaattg ggctattatc
    19021 gtgggtcaaa tcacttaggt ggtttagaag gcggtatgtc aaatggaatg ccaattatcg
    19081 ttaatggtgt aatgaaacca attccaacgt tatataaacc attaaattca gtagacatta
    19141 ataccaaaga agactttaaa gcaacaattg aacgttctga tagttgtgct gttcctgcag
    19201 caagtatcgt ctgcgaacat gtcgtagcat ttgaaattgc aaaagcatta ttggaagaat
    19261 tccaatcaaa tcatattgag caacttaaac aacaaattat tgagcgcaga caattaaata
    19321 ttgagtttta acaacaagaa caattgaggt gtaatcatga aattacaaac aacataccct
    19381 tcaaacaatt atccaatata tgtagaacac ggtgcaatca agtatatagg cacatattta
    19441 aatcaatttg accaaagttt cttgttaatt gatgaatatg taaatcaata ttttgcgaat
    19501 aaatttgatg atattttatt atatgaaaat gtacataaag tcattatttc agctggtgaa
    19561 aagacgaaaa catttgagca atatcaagaa accttagaat acattttgtc gcatcatgta
    19621 acgcgtaata cagcgattat agctgttggt ggtggtgcga caggagattt tgcaggattt
    19681 gtagcagcaa cactattaag aggtgtccat tttatacaag ttccgacaac gattttggcg
    19741 catgattcta gtgttggcgg taaagtgggt attaactcaa agcaaggtaa aaaccttatc
    19801 ggtgcatttt atcgtccaac tgctgtgatt tatgatttag actttttaaa gacgttacca
    19861 tttgagcaaa tattaagtgg ctatgcagaa gtttataagc atgcgttatt gaatggtgaa
    19921 tcagcgacgc aagatatcga acagcacttt aaagatagag agatattaca gtcattaaat
    19981 ggtatggata aatatattgc taaaggtatt gaaacgaagc tggatattgt tgttgcagat
    20041 gaaaaagaac aaggtgtacg taaattttta aatttaggtc atacatttgg gcatgctgtt
    20101 gaatactatc ataaaatacc tcatggtcat gccgtgatgg ttggcattat ctatcaattt
    20161 atagttgcga atgctttgtt tgattctcag catgatatta atcattatat tcaatattta
    20221 atacaactcg gctatccttt agacatgata actgacttgg attttgaaac gttataccaa
    20281 tatatgctaa gtgataaaaa gaatgataag caaggtgtac aaatggtctt gattagacaa
    20341 tttggagata tcgttgtaca acatgttgat caactaacat tacaacatgc atgtgaacaa
    20401 ttaaaaacat attttaagta ggtgaatgaa atggtaaatg aacaaatcat tgatatttca
    20461 ggtccgttaa tgggcgaaat agaagtgcca ggcgataaat caatgacaca ccgtgcaatc
    20521 atgttggcgt cgctagctga aggtgtatct actatatata agccactact tggcgaagat
    20581 tgtcgtcgta cgatggacat tttccgactg ttaggtgtag aaatcaaaga agatgatgaa
    20641 aaattagttg tgacttcccc aggatatcaa tcttttaaca cgccacatca agtattgtat
    20701 acaggtaatt ctggtacgac aacacgatta ttggcaggtt tgttaagtgg tttaggtatt
    20761 gaaagtgtct tatctggaga tgtttccata ggtaaaaggc cgatggatcg tgttttaaga
    20821 ccgttaaaaa gtatgaatgc aaatattgaa ggaattgaag acaattacac cccattaatc
    20881 attaaaccat ctgtaattaa aggtattaat tacaagatgg aagtggcaag tgcacaagtg
    20941 aaaagtgcca tcttattcgc aagtctattt tctaaggaag cgacgatcat taaagaatta
    21001 gatgtaagtc gaaatcatac tgagacgatg ttcagacatt ttaatattcc aattgaagca
    21061 gaagggttgt caattactac aacccctgaa gcaattcgat acattaaacc tgcagatttt
    21121 catgttcctg gcgatatttc atctgcagcg ttctttattg ttgcagcact tatcacacca
    21181 ggaagtgatg taacaattca taatgttgga atcaatccaa cacgttcagg tattattgat
    21241 attgttgaaa aaatgggcgg taatattcaa cttttcaatc aaacaactgg tgctgaacct
    21301 actgcttcta ttcgtattca atacacacca atgcttcaac caataacaat tgaaggtgaa
    21361 ttagtgccaa aagcaattga tgaactgcct gtaatagcat tactttgtac acaagcagtt
    21421 ggcacgagta caattaaaga tgccgaggaa ttaaaagtaa aagaaacaaa tagaattgat
    21481 acaacggctg atatgttaaa cttgttaggg tttgaattac aaccaactaa tgatggattg
    21541 attattcatc cgtcagaatt taaaacaaat gcaacagtgg atagtttaac tgatcatcga
    21601 atagggatga tgcttgcagt tgcttctcta ctttcaagcg aacctgtcaa aatcaaacaa
    21661 tttgatgctg taaatgtatc atttccagga tttttaccaa aactaaagct tttagaaaat
    21721 gagggataat ataaaatgga agatatctat aaattaatag acgatatcaa tctacaaaaa
    21781 ctagaaaatt tagactctcg tgttaatgaa gcaataacta ctgacaacga tgacgcatta
    21841 tttattctag gagagacact ttacaatttt ggattaatgc cacaaggttt ggaagtattc
    21901 cgcgtgttat atcacaaata tccagacgaa agtgaattgc tgatttattt tattgaaggt
    21961 ttaatgtctg aaaatcaaac tgacgaagcg ttagaatatt taagttatgt tgaaccatca
    22021 cctgaaaagt tgatgttaga agcagattta tatcaacaaa ttaatatgat ggaagttgct
    22081 attgataaat tacaagaagc acttgaacta gagccaaatg atccaataat ccattttgca
    22141 ttggctgaaa tgttatatta tgatggtcaa tatttacgtg ctacctctga atacgaaact
    22201 gttttagaaa ctggtgaata tcaagttaat ggtgtgaatt tattctctcg tatggcagat
    22261 tgtagtttgc aaagtggtaa ctatagtgat gcgattcgct tatacgatga aattaatgaa
    22321 gatgaaatga cttcagaaga ttatctcaaa aaagccattt cttacgataa aaatgacatc
    22381 actcaagaag caattaaaat aatgattaca ttactttcta aagatcctga ttatattcaa
    22441 ggctacttgt atttacaatc attatatgaa aatgaaaaaa attatccaga tgccattgaa
    22501 acgggtaaag aaggattacg actaagtcat ttttataaag agttaatgta tacaactgga
    22561 tgtttggaaa tagaacacgg cgatgctaat gaaggtgtat tattgttaaa acaagcatta
    22621 gaggttgata atgcttacca agaaccttta ttgattttaa gcgatttata tcgtaatgaa
    22681 gaagattatg aagcaatcat tgaattatta acatatgtag atgaagaaga tttggatcct
    22741 acattcatgt ggcatttagc gttcgcctat ggtcaagaag agcgagataa agaagctcaa
    22801 catttctttg aattagcata tccaacgatg aaaacaaata ttgattttat gagtgattat
    22861 tatttctatt taattgaaac tggtcaaaag gaacaagcaa ttactatttt aaatcaattg
    22921 ttggaactag aacctagtaa cgaaaattgg catgacgaat tatcaagatt gcaattttaa
    22981 aatggggtat ttgatgtcag agacactcaa tcaaattaaa gaaagtttta ttgaatattt
    23041 actttttcaa tatcgattta agtcgcgtat tgcagtttgg gtacttaact atataaaagt
    23101 gaatgagacg aagttggcaa acattcattt tgtagataca aaaattaatc atcatgaaac
    23161 attagaaatt gcagaagtgg gaagtcacgc ttctgcaatt caatttacta agcataatat
    23221 aaagttaatg aatacaaatg aaatatttga ttatatcgct aatcataatt gtgcttttga
    23281 tattcaaatt cacttcgcaa acgtgtcaaa gcgtgagcaa aggctagatg atttaatagt
    23341 tgctcaacta acggaatcgc ccagctatca aacttatctt catgatttaa atagtatgtc
    23401 tatagatcgg cataaacatg cgttattaat agattacttg ctacataata ttgatttaag
    23461 tttacagatg aatgaaaagc aacgttttta tcaactaacg caaattttaa atacactcaa
    23521 gctagtaaat aaacataatc aatttgagga cttagcagat gacgattaat acattttggc
    23581 aatatacact ttatcaacgt tcttggttaa tgatgctact catttgtaat atattaggga
    23641 tgatttatgg ttatatatgg tatggtgaac aattaagtca tacgccgtgg cagtttaaga
    23701 tttttgttcc agatagccca actgcaatat tattcttagt tatttctatc tcattgatat
    23761 taatccgaaa acaaaatagt attatcgatg cactggcatt tgtaacatta ttcaaatatg
    23821 ggatatgggc agttattatg aatatattat ttattattga acaaggtgat attacagtaa
    23881 atggcctggt attaatgttt tcccacagta taatggctgt tcaggcaatt tacttctatc
    23941 ctaggtttaa acgttctatg attggaatca ttgtagcgat gacttgggta tttttgaatg
    24001 attatattga ctatttttac cttcaatttc catattatga ttttataact acacatgtgt
    24061 ggcaaattgg tgtattatca tgttgtctga gtgtttttgg acttttgctt tatattgaat
    24121 taaacaaatt attaaagtgt aaatgatttg ataaaaacgg caaatgacag taaaatattt
    24181 ataaaggaga gtgagtttat tgtcttcaat ttttactatg ataatttatt tcgtaatatt
    24241 aatggtgctt cctttatggg cacaacacaa agttaaatct aactatgaga aatattcaca
    24301 agttagatca actagtggta aaacgggtcg tgaagttgca ttagaaattt tacatgcaaa
    24361 cggtatttat gatgtcgaag ttgttaaagg tgaaggattc ttaacagatc attacgatcc
    24421 taaaaagaaa gttgtttcac tatctcctgc aaactatgac agaccatcag ttgctggaac
    24481 tgcaattgca gcccacgaag ttggtcatgc cattcaagat caccaaggat attggttctt
    24541 aagattcaga gcagcattag tacctgttgc aaacctaggg agttcattaa gttatatgat
    24601 catcatgtta ggtattatct taacagcgat aggtagtgca tttggttcaa ctgctttatg
    24661 gattggtgct ggtttaatgt cattagcggt attattctca attgttacgt taccagttga
    24721 gtttgatgcg agttcaagag cgatgaaaca aattacggca ttgaacattg taaatgaaaa
    24781 ggaatacaaa catgcgcgta aagtattatc tgcagcagca atgacttatg ttgcagcaac
    24841 tgctgtcgct gtagcagagc ttgtacgtat tattttgatt gcgcgttcaa gtgattaatc
    24901 ttatagatta acaattaact taaattagac acttattaac tagctaatca cattttgtgt
    24961 gattgctagt ttttttgtgc ttatttttct aatggtagat tattcactat attattttat
    25021 tgtagtggta cgtatcataa agttataatc ccaatttcaa ttgatttaat ttagttagga
    25081 atgcattaca tttatataaa ctgaattatt aaacttctaa aataaacaac ttgtcatcta
    25141 gtttagctag agtcagtaga ttgcactaaa catgcatgag acttcaaatt gatatatact
    25201 atattagaaa tgcaatataa ggagaacgta gaaatgaaat caatggtaga aatgcaacgt
    25261 gaagttgatg aatatattgg acaatttaaa acaggatatt tttcaccatt agctaactta
    25321 gctagattga ctgaagaagt gggcgaactt gcacgtgaaa taaatcatac ctatggtgaa
    25381 aaaaagaaga aagattcaga ggaagcaaat acgattaaag cagaattagg tgataattta
    25441 tttgtgttgt tatgtttagc gaattcaatg ggaatagata tgacagagag ctttaatgaa
    25501 acaatggaaa agtttaatac aagagataaa aatcgattcg aaagaaagtg aatataaaaa
    25561 tatatgcttt atttggattt gattaagatt aaaaacatag accaatgaat tacatcgcat
    25621 gaaatcatat tatttttaaa gtaagtagaa ctagataaat gattatatat acagcacctg
    25681 tttttttaga tatttgaaat tataaactca acattactat aaacttaaat tgtaaaatta
    25741 aatttaaaca ataatctacg catcgagaat aatagaaaga gaaatagaaa gaaaggatgg
    25801 gcaagcgaat gaagataggt ataacatgtt acccgtccat gggtggttct ggaattattg
    25861 ccacagaatt aggaattaaa ttagcagagc gaggtcacga agtacatttt atcacttcaa
    25921 atatcccgtt tagaataaga aaaccattac cgaatatgat ttttcatcaa gttgaagtga
    25981 atcaatatgc agtatttcaa tatccaccgt atgatattac gttaagtact aaaatcgctg
    26041 aagttattaa agaatatgat cttgatttgt tgcatatgca ctatgctgta cctcatgcaa
    26101 tttgtgggat tttagctcgt gagatgtcag gtaaagatat aaaaattatg acaacgttac
    26161 acggtactga tattactgtt ttgggctatg atcattcact ccaaggtgca attaaatttg
    26221 gcattgaaaa aagtgatatt gtaacaagtg tgagtaaatc tttagcgcaa gaaacacatg
    26281 aaattattga aactaacaaa gagattatac cgatttataa ttttgtacgt gaaaatgagt
    26341 ttccaactaa acataacaca gcattaaaat cacaatttgg tatagcacca gatgaaaaag
    26401 tgttaataca tgtatcgaat tttagacaag taaaacgcat agatactatt atagaaacat
    26461 ttgcaaaagt acgtgaaaag atacctagta aattaatttt acttggtgat ggtcctgaat
    26521 tagtgccaat gcgtcaaaag acgaaagagt taaacgtaga agaggatgtt ttatttttag
    26581 ggaaacaaga ttgcgtaagt gaattttacc aattatctga cttagtatta ttattaagtg
    26641 aaaaagaaag ctttggacta actttacttg aggctatgaa aacaggcgtc gttccaattg
    26701 gttcaaatgc cggtggaatt aaagaggtta ttaaacatgg tgaaactgga tttgtcgtag
    26761 atgtgggtga tagtgattca gcgagtgact atgctatccg attacttgaa gataaggtgt
    26821 tatacaacaa acttcagaaa aacatgctag cagatattgc tgaacgtttt ggatcagaac
    26881 tcattacaga tcaatatgag tattattatc aaaaaatgct aaatgagcat aacaaaagta
    26941 aaggcgagta ataatatgga taaatcatta tttgaacagg caaggcctat attagaacaa
    27001 attcaagaca atggttttga agcatattat gtaggtggct ctgtaagaga ttatgtcatg
    27061 ggaagaaata ttcatgatat agatatcaca acaagtgcaa cgccagatga aatagaatct
    27121 atctttagtc atacgatacc tgtaggtaaa gaacatggca ccataaatgt agtttttaat
    27181 gatgaaaatt atgaagtgac aacattccgt gctgaagaag attatgtcga tcaccgtaga
    27241 ccaagtggtg ttacatttgt tcgtgattta tacgaagatt tgcaacgaag agatttcacg
    27301 atgaatgcga tagcaatgga tacagcatac aaattgtatg attattttga tggtcaacaa
    27361 gatattaata atcgaataat aagaactgta ggtatagctg cggaacgatt ccaagaagat
    27421 gctttacgca tgattcgatg tttaagattc cagtcacaat tatcatttga tattgcaacg
    27481 gaaacatttg aagcaatgcg tacacaaatg gcagatatta aatttttatc aattgagcgt
    27541 atagtgattg aactaactaa attaatgcga ggtattaatg ttgaagagag ttttaatcat
    27601 ttaaaatcga tgaaagcatt taattatatg ccatatttcg aacatcttga tatgaatcaa
    27661 attaatgtga ctgaaccaat tgatttagaa ttgttgattg ctatagtgtc agttaaattt
    27721 gatattaatt actcattaaa gcctttaaag ctaagtaacc gacaagtaaa agatatcaat
    27781 caatatattc aaattatgaa tgcattacca agtattatta caaaagaaca attaaaaatg
    27841 tttgtttatg attatgatac gaatctcatt aaaaatgtaa tggttgcagc agacgtgtta
    27901 aaggcaaatg atattcaagg acatgaacca ttaatcgtta accttcaaac gattgatgaa
    27961 acattacttc acttacctat gcataataga aaagacatga tggttaatgg cggtgtactt
    28021 atggcacatt taaatgccaa aagtggtccg tggttaaaag atgtgctaag acaaattgag
    28081 atagcgattg taacaggtaa agtaagcaac gaagaaactg aaattttgaa atgggtggat
    28141 aatcatgtca aaatatagtc aagatgtact tcaattactc tataaaaata aaccgaatta
    28201 tatatctgga caaagcattg cggaatcact taatatatcg cgcactgcag taaaaaaagt
    28261 gattgaccaa ttaaagttag agggatgtaa aatagattca gtaaatcata aaggacattt
    28321 attacaacaa ctcccagata tttggtatca aggtataata gaccaatata caaaaagttc
    28381 tgctttgttt gattttagtg aagtatacga ttcaatagat tctacacaac ttgctgcgaa
    28441 aaagtcactt gttggaaatc aatcttcatt ttttatcttg agtgatgaac aaacgaaagg
    28501 tcgtgggcga tttaatagac attggagttc ttcaaaaggg caaggacttt ggatgtctgt
    28561 cgtgttaaga cctaacgttg cattctcaat gatatctaaa tttaatttat ttattgcatt
    28621 agggataaga gatgcgattc aacattttag tcaagatgaa gtcaaagtga aatggccgaa
    28681 tgatatatat attgataatg gtaaagtgtg tggtttctta actgaaatgg ttgctaataa
    28741 tgatggtata gaagcaataa tatgtggtat aggtattaat ttgacgcaac aactagaaga
    28801 ctttgatgaa agtattagac atagagcaac aagtatacaa ttacatgata aaaataaatt
    28861 agatagatat caatttttag agagattact tcaagaaatt gaaaaaagat ataatcaatt
    28921 tttaacgtta cctttttctg aaattcgtga agaatatatt gcagcttcta atatttggaa
    28981 tagaacgttg ctatttacag aaaatgataa acagtttaaa ggacaagcaa ttgatttaga
    29041 ttacgatggc tatctaattg ttagagatga agcgggtgaa tcacaccgtt taattagtgc
    29101 agatatagat ttttaacact aaagcaagga gagatagcta tgggtatggc aacctatgcc
    29161 gttgtggatt tggaaacaac aggcaaccaa ttagattttg acgatatcat tcaaattggt
    29221 ataacgtttg tgcgcaataa ccaaattatt gatacatatc attctatgat tagaacaaat
    29281 ttagagattc cgccattcat tcaagcgtta acatccattg aagaaaatat gctacaacaa
    29341 gcgccatatt ttaatcaagt tgcacaagaa atctacgata agataaaaga ttgcattttt
    29401 gtcgctcata atgtagattt tgatttaaat tttattaaaa aggcatttaa agattgtaat
    29461 attcaatatc gtcccaaaaa agttatagat acactagaaa tctttaaaat agcttttcct
    29521 acagataaaa gctatcaatt aagtgaatta gcagaggcac atggtattac tttagcaaat
    29581 gcccatcgag ctgacgaaga tgccgctact actgctaaat tgatgatatt agcttttgaa
    29641 aaatttgaaa agttaccgtt agatacttta aagcaattat attatttaag taaacagttg
    29701 aaatacgatt tgtatgatat tttctttgag atggttaggc aatatgatgc aaagccattg
    29761 gataaatcgt acgaaaagtt cgaacagatt atctatcgta agcaagttga ttttaaaaag
    29821 ccgacaacaa attataatgg cagcttgaag tctttatata gcaaagctgt agatcaactt
    29881 ggcttaacat atcgaccgca gcaattatat ttagcggaaa ctatattaga tcagctcatg
    29941 catagtgaaa aagcaatgat tgaagcatca ctaggcagtg gtaaatcatt agcatattta
    30001 cttgcggcct tgatgtataa tattgaaact gggaagcatg tcatgatttc taccaatacc
    30061 aaattactgc aaagtcaatt gttagaaaaa gatattccag caatgaatga agcgttgaat
    30121 tttaaaatta atgcactatt gattaaaagt aaaagtgatt acatttcatt gggacttatt
    30181 agtcaaattt taaaagatga cacaagtaat tacgaagtga atatcttgaa aatgcaattg
    30241 ctgatttgga ttacagagac gccatccgga gatatccagg aattaaattt aaaaggtggt
    30301 caaaagatgt attttgacca gaaaatcgaa acatatgtac cggcacgtca cgatgttcat
    30361 tattataatt ttattaagcg aaatgcacag aacattcaaa ttggtattac aaatcatgca
    30421 catttaattc attctgatgt tgaaaattca atatatcaat tgtttgatga ttgtatagta
    30481 gatgaagcac atcgcttacc agactatgcc ttaaatcaag tgacaaatga gttgagttat
    30541 gctgatatta aatatcagct tggtttgatt ggtaaaaacg aaaatgaaaa attgttaaag
    30601 gcaattgatc aactggaaaa gcaacgaata ttggaaaaat tagatattgc accaattgat
    30661 atttttggct tgaaggctag tatgaatgag attcatgagt taaatgagca attgttctca
    30721 acgatattta cgattatcaa tgattctgat gtttatgatg atgatattca tcgtttccat
    30781 aatgtattta cttttgaaac aaaagacatt ttgaaggatt tacatgcgat tatcgataag
    30841 ttaaataaaa cgctagaaat attcaatggc attagtcata aaacagttaa atcattacgg
    30901 aaacagttgt tgtatttaaa agataaattt aaaaatatcg aacaaagttt aaaagctgga
    30961 catactagtt tcatttcaat taaaaattta tctcaaaaat caacaatacg tttatatgtg
    31021 aaagattacg ctgtaaaaga tgtattgacg aaacaagtat tggaaaaatt taaatcactc
    31081 atttttatat ctggtacttt aaaatttaat cattcgtttg atgcttttaa acagttattc
    31141 aacaaagatg ttcactttaa tacatttgaa gttaacacgt cgttacaaag tgcaaaaaat
    31201 acaagtgtat ttataccgag tgatgtagca tcttatcaat ataaaaatat agatgagtat
    31261 gtagcatcga ttgtaagcta tattattgaa tatacgacta taacgtcatc aaaatgttta
    31321 gtcttattta cgagttataa aatgatgcat atggtacaag atatgctaaa tgaattgcca
    31381 gaatttgaag attatgttgt attaacacaa cagcagaacc aaaattataa aatagtacaa
    31441 cagtttaata attttgataa ggccatactg cttggtacgt caacattttt tgaaggcttt
    31501 gattttcaag caaatggtat taaatgtgtg atgatagcga agttaccgtt tatgaacaag
    31561 cataatgcaa aatattggct tatggattct gaattcactt caactttcaa ggaatatgta
    31621 ttacctgatg cagttacacg ttttagacaa ggacttggaa gattaattag aaatgaaaat
    31681 gatcgcggca taatagtttc atttgatgat cgactcataa acagtaatta taaaaacttt
    31741 tttgaacaaa cacttgaaaa ttatcgtcag aaaaaaggcg acattcaaca gtttggaaaa
    31801 ttattaagac aaattcaaaa aaagaaaaag tgagatacaa agtaaaattc ttgtgacatg
    31861 acatgtgcta tgttctgtta caagaatttt tgtttggtcg tcaatatttg agttttataa
    31921 ttaaacttga atgttagcac aaaaaacgac cttcatacta ataatattga ggctttatta
    31981 tatattttgt ctgaaactga tgattgcact gtcttaatat aaattaatgt tcaaatctgt
    32041 gcttaaatca ttaccattta cacgttatct tttagtctag ttctagaact tgaaagcgga
    32101 ttttgttaaa atgaatgagt attgtataac gaaaaaataa ataggagaat ggttatgaaa
    32161 acaacgatta aacaagcgaa agatcattta aaccaagacg ttacaattgg tgcttggcta
    32221 acaaataaac gttcaagtgg taaaatcgcc tttttacaat tacgtgatgg aacaggtttt
    32281 atgcaaggcg tagtagttaa atcagaagtt gatgaagagg tattcaaact tgcgaaagaa
    32341 attactcaag aatcatctct atatgttaca ggcacaatta cagaagataa tcgttctgac
    32401 ttaggatacg aaatgcaagt gaaatcaatt gaagttattt cagaagcgca tgactatccg
    32461 attacaccta aaaatcacgg tacagaattt ttaatggatc accgtcattt atggttacgt
    32521 tctaaaaaac aacatgctgt aatgaaaatt agaaatgaag ttattcgtgc aacgtatgaa
    32581 tttttcaaca aagatggatt tacaaaggtt gatccaccaa ttttgacagc aagtgcacca
    32641 gaaggtacaa gtgaattatt ccatactaaa tactttgatc aagatgcgtt tttatctcaa
    32701 agtggtcagt tatacttaga agctgcggca atggcacacg gaaaagtatt ttcatttggt
    32761 ccaactttca gagctgaaaa atcaaaaaca cgtagacact tgatcgagtt ctggatgatt
    32821 gaaggggaaa tggctttcac aaatcatgct gaaagtttag aaattcaaga acaatatgta
    32881 acacatgtag taaaatcagt tttagaaaat tgtaaactag agttgaaaat tttagagcgt
    32941 gatacatcaa aacttgaaaa agttgcgaca ccattcccta gaatttcata cgatgatgca
    33001 attgaattct taaaagcaga aggctttgat gatattgaat ggggcgaaga ttttggtgcg
    33061 ccacatgaaa ctgccattgc taatcattat gatttaccgg tgtttattac taattatcca
    33121 actaaaatta agcctttcta tatgcaacca aatcctgaga atgaagaaac tgtattatgt
    33181 gcagacttaa ttgcacctga aggatacggt gaaattatag gtggatctga acgtgtggat
    33241 gacttagaat tgttagaaca acgcgttaaa gaacatggat tagacgaaga agcatatagt
    33301 tactacttag acttacgtcg ttatggtagt gtgccacact gtggatttgg tttaggttta
    33361 gagcgtacag tagcatggat ttctggtgtt gaacacgttc gtgaaacagc gccattccca
    33421 agattattaa accgtttata tccataagtt ttaggatcgt tacttaaaat ttatattatg
    33481 ataataaaaa gaatcgtcca gcctatatta atagctgggc gatttatgct tggaaaatgt
    33541 agattgataa cggctttcat taagcatgaa caaacttttg tttagtaatt atatttggaa
    33601 aataa
//
LOCUS       DALMNS010000020        33571 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.020, whole genome shotgun sequence.
ACCESSION   DALMNS010000020 DALMNS010000000
VERSION     DALMNS010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 33571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33571
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.020"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            180..1874
                     /gene="ezrA"
                     /locus_tag="O6Y56_000760"
     CDS             180..1874
                     /gene="ezrA"
                     /locus_tag="O6Y56_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation ring formation regulator EzrA"
                     /protein_id="HDB5574044.1"
                     /translation="MVLYIILAIIVIILIAVGVLFYLRSNKRQIIEKAIERKNEIETL
                     PFDQNLAQLSKLNLKGETKTKYDAMKKDNVESTNKYLAPVEEKIHNAEALLDKFSFNA
                     SQSEIDDANELMDSYEQSYQQQLEDVNEIIALYKDNDELYDKCKVDYREMKRDVLANR
                     HQFGEAASLLETEIEKFEPRLEQYEVLKADGNYVQAHNHIAALNEQMKQLRSYMEEIP
                     ELIRETQKELPGQFQDLKYGCRDLKVEGYDLDHVKVDSTLQSLKTELSFVEPLISRLE
                     LEEANDKLANINDKLDDMYDLIEHEVKAKNDVEETKDIITDNLFKAKDMNYTLQTEIE
                     YVRENYYINESDAQSVRQFENEIQSLISVYDDILKEMSKSAVRYSEVQDNLQYLEDHV
                     TVINDKQEKLQNHLIQLREDEAEAEDNLLRVQSKKEEVYRRLLASNLTSVPERFIIMK
                     NEIDHEVRDVNEQFSERPIHVKQLKDKVSKIVIQMNTFEDEANDVLVNAVYAEKLIQY
                     GNRYRKDYSNVDKSLNEAERLFKNNRYKRAIEIAEQALESVEPGVTKHIEEEVIKQ"
     gene            2194..3342
                     /locus_tag="O6Y56_000761"
     CDS             2194..3342
                     /locus_tag="O6Y56_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDB5574045.1"
                     /translation="MFILIYLDNAATTKAFEEVLYTYLKVNQSMYVNPNSPHKAGLQA
                     NQLLQQAKAQINDMVNTNMTYDVVFTSGATESNNIALKGVAYRKFDTAREIITSVLEH
                     PSVLEVVRYLEEREGFKVKYVDVTKDGTIDLQHFNDLMSDKVGLVTCMYVNNVTGQIQ
                     PIPKMAETLKNYPKAHFHVDAVQAFGKVAMDLTNVDSISLSGHKFNGLKGQGVLLVNH
                     IQNVEPTVHGGGQEYGVRSGTVNLPNDIAMVKAMKIANENLEALNAFVTEINNDVRQF
                     LNKYHGVYINSSTSGSPFVLNISFPGVKGEVLVNAFSKYDIMISTTSACSSKRNKLNE
                     VLAAMGLSDKSIEGSIRLSFGATTTKEDIARFKEIFIIIYEEIKELLK"
     gene            3342..4565
                     /gene="thiI"
                     /locus_tag="O6Y56_000762"
     CDS             3342..4565
                     /gene="thiI"
                     /locus_tag="O6Y56_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HDB5574046.1"
                     /translation="MKYDHLLVRYGELTLKGSNRKKFVNQLRNNVNKSLKGLDGFVVK
                     GKRDRMYIELEDHADINEITYRLSKIFGIKSISPVLKIEKTIEAMREAAIKFAQTFEN
                     DSTFKIDVKRADKNYPMDTYELQRELGGAVLKHFDNISVNVKRPDHEIRVEVRLDAIY
                     MYEEVVAGAGGLPVGTGGKTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFHSPPFTSDQ
                     AKEKVIELTRILAERVGPIKLHIVPFTELQKQVNKVVHPRYTMTSTRRMMMRVADKLV
                     HQIGALAIVNGENLGQVASQTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGTF
                     ETSIQPFEDCCTIFTPKNPVTEPNFDKVVQYESVFDFEEMINRAVENIETLEITSDYK
                     TIKEQQTNQLINDFL"
     gene            4609..5379
                     /locus_tag="O6Y56_000763"
     CDS             4609..5379
                     /locus_tag="O6Y56_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDB5574047.1"
                     /translation="MDLNLTMIIIIILFGFIAAFIDSVVGGGGLISTPALLAIGLPPS
                     VALGTNKLASSFGSLTSTIKFIRSGKVDLYVVAKLFGFVFLASACGAYIATMVPSQIL
                     KPLIIIALSSVFIFTLLKKDWGNTRTFTQFTFKKAILFAALFILIGFYDGFVGGGTGS
                     FMLFVLLVFGFDFLSAAGNAKVLNFASNIGALVLFMVLGQVDYVIGLIMATSMIAGSY
                     TGAHFAIKQGVGYVKVLFIIITAILILKNAFDYIQQFV"
     gene            5477..5971
                     /gene="tpx"
                     /locus_tag="O6Y56_000764"
     CDS             5477..5971
                     /gene="tpx"
                     /locus_tag="O6Y56_000764"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDB5574048.1"
                     /translation="MTEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAG
                     KKKLISVVPSIDTGVCDQQTRKFNSEASKEEGIVLTISADLPFAQKRWCASAGLDNVI
                     TLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAA
                     YKNI"
     gene            6094..7041
                     /locus_tag="O6Y56_000765"
     CDS             6094..7041
                     /locus_tag="O6Y56_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDB5574049.1"
                     /translation="MAEQQTIMERLFHTLDEKAKTLNNENGQSFIENLGLAMEQVYTN
                     ERGLLEQSTLQDRRKAFQFAYLSLMQEEKIQANHQITPDSIGLILGFLVERFMNNQEE
                     LHIVDIASGVGHLSATVKEVLPEIAVMHHLIEVDPVLSRVSVHLANFLEIPFDVYPQD
                     AIMPLPLEEADIVIGDFPVGYYPIDERSKEFKLGFEKGHSYSHYLLIEQAINALKDAG
                     YAFLVVPSNIFTGEHVKQLEKYIATETEMQAFLNLPPTLFKNEKARKSILILQKKKSG
                     ETKPVEVLLANIPDFKNPSQFQGFMTELNQWMDTNRPKK"
     gene            7129..8331
                     /locus_tag="O6Y56_000766"
     CDS             7129..8331
                     /locus_tag="O6Y56_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDB5574050.1"
                     /translation="MSKLILAINAGSSSLKFQLIRMPEEELVTKGLVERIGLKDSIFT
                     IEVNGEKVKTVQDIKDHVEAVDIMLDAFKAHNIINDINDIDGTGHRVVHGGEKFPESV
                     AITDEVEKEIEELSELAPLHNPANLMGIRAFRKLLPNIPHVAIFDTAFHQTMPEKAYL
                     YSLPYHYYKDYGIRKYGFHGTSHKFVSQRAAEMLDKPIEDLRIISCHIGNGASIAAID
                     GGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPFIMEKTGKTAEQVLEILNKESGLLGL
                     SGTSSDLRDLSEEAESGKARSQMALDVFASKIHKYIGSYAARMHGVDVIVFTAGIGEN
                     SVEIRAKVLEGLEFMGVYWDPKKNENLLRGKEGFINYPHSPVKVVVIPTDEESMIARD
                     VMTFGGLK"
     gene            complement(8577..9077)
                     /locus_tag="O6Y56_000767"
     CDS             complement(8577..9077)
                     /locus_tag="O6Y56_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDB5574051.1"
                     /translation="MITYKNILIAVDGSHEAEWAFNRAVGVAKRNDAKLTIVNVIDSR
                     TYSSYEVYDAQFTEKSKHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAH
                     EINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVRTEELPADFQPQVATTQL
                     REKYQN"
     gene            9218..10336
                     /gene="ald"
                     /locus_tag="O6Y56_000768"
     CDS             9218..10336
                     /gene="ald"
                     /locus_tag="O6Y56_000768"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HDB5574052.1"
                     /translation="MKIGIPREIKNNENRVGLSPSGVHALVESGHTVLVETNAGSGSF
                     FEDVDYKEAGAEIVAEQAKVWDVDMVIKVKEPLESEYPYFKEGLVLFTYLHLANEEKL
                     TQALIDRKVISIAYETVQLPDRSLPLLSPMSEVAGRMSAQVGAEFLQKLNGGMGILLG
                     GVPGVPKGKVTIIGGGQAGTNAAKIALGLGADVTILDVNPKRLQQLDDLFGGRVHTIM
                     SNPLNIELYVKQSDLVIGAVLIPGAKAPRLVTEDMIKQMKNGSVIIDIAIDQGGIFET
                     TDKITTHDDPTYIKHGVVHYAVANMPGAVPRTSTLALNNATLPYALMLANKGYREAFK
                     SNQPLSLGLNTYKGHVTNKGVAEAFEMEYKSVEEALQL"
     gene            10460..10573
                     /locus_tag="O6Y56_000769"
     CDS             10460..10573
                     /locus_tag="O6Y56_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574053.1"
                     /translation="MNDIDLIHYMLLMNVPAYVFLACLLYIAVRLGQKFMF"
     gene            complement(10652..11707)
                     /locus_tag="O6Y56_000770"
     CDS             complement(10652..11707)
                     /locus_tag="O6Y56_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HDB5574054.1"
                     /translation="MTKISKIIDELNNQQADAAWITTPLNVYYFTGYRSEPHERLFAL
                     LIKKDGKQVLFCPKMEVEEVKASPFTGEIVGYLDTENPFSLYPQTINKLLIESEHLTV
                     ARQKQLTSGFNVNSFGDVDLTIKQLRNIKSEDEISKIRKAAELADKCIEIGVSYLKEG
                     VTEREVVNHIEQTIKQYGVNEMSFDTMVLFGDHAASPHGTPGDRRLKSNEYVLFDLGV
                     IYEHYCSDMTRTIKFGEPNKEAQEIYNIVLEAETSAIQAIKPGIPLKDIDHIARNIIS
                     EKGYGEYFPHRLGHGLGLQEHEYQDVSSTNSNLLEAGMVITIEPGIYVPGVAGVRIED
                     DILVTNEGYEVLTHYEK"
     gene            11882..12571
                     /locus_tag="O6Y56_000771"
     CDS             11882..12571
                     /locus_tag="O6Y56_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDB5574055.1"
                     /translation="MKLSFHGQSTIYLEGNNKKVIVDPFISNNPKCDLNIETVQVDYI
                     VLTHGHFDHFGDVVELAKKTGATVIGSAEMADYLSSYHGVENVHGMNIGGKANFDFGS
                     VKFVQAFHSSSFTHENGIPVYLGMPMGIVFEVEGKTIYHTGDTGLFSDMSLIAKRHPV
                     DVCFVPIGDNFTMGIDDASYAINEFIKPKISVPIHYDTFPLIEQDPQQFKDAVNVGDV
                     QILKPGESVQF"
     gene            complement(12959..13372)
                     /locus_tag="O6Y56_000772"
     CDS             complement(12959..13372)
                     /locus_tag="O6Y56_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDB5574056.1"
                     /translation="MYKNILLGVDTQLKNEKALKEVSKLAGEGTVVTVLNAISEQDAQ
                     ASIKAGVHLNKLTEERSKRLEKTRKALEDYGIDYDQIIVRGNAKEELLKHANSGKYEI
                     VVLSNRKAEDKKKFVLGSVSHKVAKRATIPVLIVK"
     gene            13577..14875
                     /locus_tag="O6Y56_000773"
     CDS             13577..14875
                     /locus_tag="O6Y56_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HDB5574057.1"
                     /translation="MTKHEQILDYIESLSIGSKISVRKIAKFLNVSEGTAYRAIKDAD
                     KMGMVATIDRVGTVRIEKRNRNEIEHLTFNEIVNIIDGQVLGGNKGITKMVSKFAIGA
                     MELKDILKYIGPKTLLIVGNREDVQIEALKRGTAILITGGFKPSNKVINFANEHDLPV
                     LSSSYDTFLVANIINKALFNQKIRKDILIVQDIMTPLDDLSVLFDTMKIADYKRMANR
                     TGHTRFPVVNESYKLVGIVTSREMINTKDDDEIDKVMTRNPIYVNAMSTVASCAHMMI
                     WEGIELIPVVSSNKKTVGVINRQDVLKSMQLLGRQPQMGETINDQIAKYITMNQDGIT
                     VEVSPLLINHYGTVSKAAFVSIIEETIQYEMRKFKKGNVMIENLNIVYIKTVPIESHI
                     TVRFGILDVGRNFAKIEVNMHSQNDKVASALVICQMFDEV"
     gene            15325..16266
                     /gene="pde2"
                     /locus_tag="O6Y56_000774"
     CDS             15325..16266
                     /gene="pde2"
                     /locus_tag="O6Y56_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pApA hydrolase Pde2"
                     /protein_id="HDB5574058.1"
                     /translation="MISTLNEIMKCIEDNDTIIIHRHVRPDPDAYGSQLGLKYYIQQK
                     FPQKQVFAVGEAESSLSFIGELDNIDDKTYQDALVIVCDTANAPRIDDERYSTGSKLI
                     KIDHHPAVDQYGDINLVNTNASSTSEIIYDLISHFNDEAIVNKDIASVLYLGIVGDTG
                     RFLFNNTSEHTMEIAGKLIGHDIDHNVLLNKMMEKDPKMLPFQGYVLQHFELMDDGFC
                     QVKITEDVLEQFGIQPNEASQFVNTIADIKGLKIWVFAVDEGSEIRCRLRSKGQLIIN
                     DIAQDFGGGGHPNASGVSVNSWDEFEQLATALRTKLN"
     gene            16287..19484
                     /locus_tag="O6Y56_000775"
     CDS             16287..19484
                     /locus_tag="O6Y56_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDB5574059.1"
                     /translation="MVAYLNIHTAYDLLNSSLKIEDAVRLAVSENVDALAITDTNVLY
                     GFPKFYDACIANNIKPIFGMTIYVTNGLNTIETVVLAKDNNGLKDLYQLSSEIKMNAL
                     EHVSFELLKRFSNNMIIIFKKVGDQHRDIVQVFETHNDTYMDHLSISIQGIKHVWIQN
                     VCYQTRQDADTISALAAIRDNTKLDLIHDQEDFGAHFLTEKEIKQLDINQEYLTQVDV
                     IAQKCNAELKYHQSLLPQYQTPNDESAKKYLWRVLVTQLKKLELNYDVYLERLKYEYK
                     VITNMGFEDYFLIVSDLIHYAKTNDVMVGPGRGSSAGSLVSYLLGITTIDPIKFNLLF
                     ERFLNPERVTMPDIDIDFEDTRRERVIQYVQEKYGELHVSGIVTFGHLLARAVARDVG
                     RIMGFDEVTLNEISSLIPHKLGITLDEAYQIDDFKKFVHRNHRHERWFSICKKLEGLP
                     RHTSTHAAGIIINDHPLYEYAPLTKGDTGLLTQWTMTEAERIGLLKIDFLGLRNLSII
                     HQILIQVKKDLGINIDIEKIPFDDQKVFELLSQGDTTGIFQLESDGVRSVLKKLKPEH
                     FEDIVAVTSLYRPGPMEEIPTYITRRHDPSKVQYLHPHLEPILKNTYGVIIYQEQIMQ
                     IASTFANFSYGEADILRRAMSKKNRAVLESERQHFIEGAKENGYHEDISKQIFDLILK
                     FADYGFPRAHAVSYSKIAYIMSFLKVHYPNYFYANILSNVIGSEKKTAQMIEEAKKQG
                     ITILPPNINESHWFYKPSHEGIYLSIGTIKGVGYQSVKVIVDERYQNGKFKDFFDFAR
                     RIPKRVKTRKLLEALILVGAFDAFGKTRSTLLQAIDQVLDGDLNIEQDGFLFDILTPK
                     QMYEDKEELPDALISQYEKEYLGFYVSQHPVDKMFVAKQYLTIFKLSNAQNNKPILVQ
                     FDKVKQIRTKNGQNMAFVTLNDGIETLDGVIFPNQFKKYEELLSHNDLFIVSGKFDHR
                     KQQRQLIINEIQTLATFEEQKLAFAKQIIIRNKSHIDTFEEMIKATKENANDVVLSFY
                     DETIKQMTTLGYINQKDSMFNNFIQSFNPSDIRLI"
     gene            19934..21163
                     /locus_tag="O6Y56_000776"
     CDS             19934..21163
                     /locus_tag="O6Y56_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HDB5574060.1"
                     /translation="MSLRDEALEMHKRNQGKLEVKPNVKVTNKEELSLAYSPGVAEPC
                     KDIYEDKRKVYDYTIKGNTVAVITDGTAVLGLGNIGPEASIPVMEGKAVLFKSFAGIN
                     GVPIALNTTDTEEIIKTVKLLEPNYGGINLEDISAPRCFEIEERLKKETNIPVFHDDQ
                     HGTAIVTMAGLVNALRVVNKDIAKIKVVLNGAGAAGIAIVKLLYAYGVRNMVMCDSRG
                     AIFEGRSYGMNPTKDVVAKWTNKDKIEGSLEEVVKDADVFIGVSVANALSQDMVKSMA
                     DNPIIFAMANPNPEIIPDDAKAAGARVVGTGRSDYPNQINNVLAFPGIFRGALEVEAT
                     HINEEMKKAAVEAIADLIDSSELNEDYCIPGPFDKRVAPSVARNVAKAAMESGVARIE
                     VNPQDVYDKTMKLTDLQ"
     gene            21358..22215
                     /locus_tag="O6Y56_000777"
     CDS             21358..22215
                     /locus_tag="O6Y56_000777"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HDB5574061.1"
                     /translation="MFKDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKE
                     LAENLNVCFNCDHHIPLTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYIEKIEKDQ
                     QKTGLKEAVVTGTAQLDGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFI
                     LFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGD
                     INLSEPKALIGFAGRRVIEQTINEKLPDDFQTAEFLLEHGQLDKVVHRNDMRQTLSEI
                     LKIHQEVTK"
     gene            22215..23159
                     /locus_tag="O6Y56_000778"
     CDS             22215..23159
                     /locus_tag="O6Y56_000778"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HDB5574062.1"
                     /translation="MLDFEKPLFEIRNKIESLKESQDKNDVDLQEEIDMLEASLERET
                     KKIYTNLKPWDRVQIARLQERPTTLDYIPYIFDSFMELHGDRNFRDDPAMIGGIGFLN
                     GRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTKGAY
                     PGKAAEERGQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIGIANKVLMLENSTY
                     SVISPEGAAALLWKDSNLAKIAAETMKITAHDIKQLGIIDDVISEPLGGAHKDIEQQA
                     LAIKSAFVEQLDSLESLSRDEIANDRFEKFRNIGSYIE"
     gene            23428..24396
                     /gene="pfkA"
                     /locus_tag="O6Y56_000779"
     CDS             23428..24396
                     /gene="pfkA"
                     /locus_tag="O6Y56_000779"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002462395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HDB5574063.1"
                     /translation="MKKIAVLTSGGDSPGMNAAVRAVVRTAIYNEIEVYGVYHGYQGL
                     LNDDIHKLELGSVGDTIQRGGTFLYSARCPEFKEQEVRKVAIENLRKRGIEGLVVIGG
                     DGSYRGAQRISEECKEIQTIGIPGTIDNDINGTDFTIGFDTALNTIIGLVDKIRDTAS
                     SHARTFIIEAMGRDCGDLALWAGLSVGAETIVVPEVKTDIKEIADKIEQGIKRGKKHS
                     IVLVAEGCMTAQDCQKELSQYINVDNRVSVLGHVQRGGSPTGADRVLASRLGGYAVDL
                     LMQGETAKGVGIKNNKIVATSFDEIFDGKDHKFDYSLYELANKLSI"
     gene            24418..26175
                     /gene="pyk"
                     /locus_tag="O6Y56_000780"
     CDS             24418..26175
                     /gene="pyk"
                     /locus_tag="O6Y56_000780"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDB5574064.1"
                     /translation="MRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHK
                     GRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMNEVEGTPE
                     KFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKKGVNL
                     PGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFP
                     KIENQEGIDNIAEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITA
                     TQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSA
                     EAAQDYKKLLSDRTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYR
                     PHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVTNGDLI
                     IITAGVPTGETGTTNMMKIHLVGDEIANGQGIGRGSVVGTTLVAETVKDLEGKDLSDK
                     VIVTNSIDETFVPYVEKALGLITEENGITSPSAIVGLEKGIPTVVGVEKAVKNISNNM
                     LVTIDAAQGKIFEGYANVL"
     gene            complement(26522..27883)
                     /locus_tag="O6Y56_000781"
     CDS             complement(26522..27883)
                     /locus_tag="O6Y56_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDB5574065.1"
                     /translation="MAEKLQRELSNRHIQLIAIGGAIGTGLFLGAGQTIALTGPSILL
                     TYIIIGFMLFMFMRGLGEIIIQNTEFKSFADVTNTYIGPFAGFVTGWTYWFCWIITGM
                     AEVTAVAKYVSFWFPEIPNWISALFCVLLLMSFNLLSARLFGELEFWFSIIKIATIIG
                     LIVVGFVMILFAFKTQFGHASFTNLYEHGIFAKGASGFFMSFQMALFSFVGIEMIGVT
                     AGETKDPVKTIPKAINSVPIRILIFYVGALAVIMSIIPWQQVDPDNSPFVKLFALIGI
                     PFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSSQQQAPPNFTKTNKYGVPHVAIFA
                     SSALLLVAALLNYIFPDATKVFTYVTTISTVLFLVVWGLIIIAYINYSRKNPDLHKNA
                     TYKLLGGKYMGYLIFVFFIFVFGLLFINVDTRRAIYFIPIWFILLGFMYLRYKRIAAK
                     SNK"
     gene            28231..29352
                     /locus_tag="O6Y56_000782"
     CDS             28231..29352
                     /locus_tag="O6Y56_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001662816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDB5574066.1"
                     /translation="MAELQRGLEGVIAAETKISSIIESQLTYAGYDIDDLAENAQFEE
                     VIFLLWNYRLPNEEELAHLKGKLNQYMTLNPRVYTHFEEYVTDHVHPMTALRTSLSYI
                     AHFDPDAENESDENRYERAMRIQAKVASLVTAFARVRQDKEPLKPNPDLSYAANFLYM
                     LRGELPTDIEVEAFNKALILHADHELNASAFTARCAVSSLSDMYSGIVAAVGSLKGPL
                     HGGANEQVMTMLSEIGSIENVDAYLDEKFANKDKVMGFGHRVYKDGDPRAKYLREMSR
                     QITKDAGREELFEMSVKMEKRMAEEKGLIPNVDFYSASVYHCMEIPHDLFTPIFAVSR
                     SAGWIAHILEQYKDNRIMRPRAKYIGETNRKYIPLEERK"
     gene            29401..30669
                     /gene="icd"
                     /locus_tag="O6Y56_000783"
     CDS             29401..30669
                     /gene="icd"
                     /locus_tag="O6Y56_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDB5574067.1"
                     /translation="MTAEKITQGTEGLNVPNEPIIPFIIGDGIGPDIWKAASRVIDAA
                     VEKAYNGEKRIEWKEVLAGQKAFDTTGEWLPQETLDTIKEYLIAVKGPLTTPIGGGIR
                     SLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTT
                     EVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYAIDNNRKSVTLV
                     HKGNIMKFTEGSFKQWGYDLALTEFGDQVFTWQQYDEIVENEGRDAANAAQEKAEKEG
                     KIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYE
                     TGHAIFEATHGTAPKYAGLNKVNPSSVILSSVLMLEHLGWQEAADKITDSIEDTIASK
                     VVTYDFARLMDGAEEVSTSAFADELIKNLK"
     gene            31058..31762
                     /locus_tag="O6Y56_000784"
     CDS             31058..31762
                     /locus_tag="O6Y56_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDB5574068.1"
                     /translation="MSQKVLVVDDEHSIVTLLKYNLETAGYEVVVAFDGDEALEKVEN
                     EQPDLIILDVMLPKKDGIDVCKTVRTNKNLVPILMLTAKNDEFDRVLGLELGADDYMT
                     KPFSPREVVARVKAILRRSQFVKEVEEIDDDITIGSIRIRPDYFEVYKHNELLELTPK
                     EFELLLYLIERQGRVITREHMLNTVWNYEFAGDSRIVDVHISHLRDKLEDNPKKPQLI
                     KTVRGLGYKLERPKEQ"
     gene            31762..33423
                     /locus_tag="O6Y56_000785"
     CDS             31762..33423
                     /locus_tag="O6Y56_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HDB5574069.1"
                     /translation="MKFHHRLMLLISSILIISFVTLGIIIHASITYVLSEKHEQALAT
                     DARSYIYLVEDNEIDKVKEIVKQQNIDLLITKNDKKVFSSGKLKATKNSDSYIQKKDI
                     FIFNKKVNGYHVWIKGYNNDITEMHWTLWKYLILTCLVVLICLYFASRSFKRTLIRPI
                     QEVTYATQLLANGYYHIRVPESNVVETKALFVSTNDLARRLQKLNNEQKIQSNRLKTT
                     IENIPSAILMIDRNGKIVVANKAYYEQFNISHNIEQVGYHGYVNTEIEQLILESFKVE
                     KPIYEQLEVAINQVHAKYFDISCVPILTRSQKSLQGILVVMHDITNLKQLENLRREFV
                     ANVSHELKTPITSIKGFAETLIDGAKNDAESLDMFLNIILKESNRIESLVTDLLDLSH
                     IEQHTELDTDYMNLSDLTRRIIDNMMTQANQKNISIHTDIEKDVIVKAQESKIAQVIT
                     NLLTNAINYSYEDGDINVRVYRDDFRVIFEVQDFGIGIKLEDQQRIFERFYRVDKARS
                     RDSGGTGLGLSITKHIVEAHQGNIEVNSQVGKGSTFKVILKDYKE"
BASE COUNT        11825 a         4653 c         6358 g        10735 t
ORIGIN      
        1 gtttctttaa taatgtgtag tttgttgggt taattgttgt catatttaaa acctcttatt
       61 ttcatagatt ttataatagt atagaatttc gaaaatatta tggcaataaa ttcattttat
      121 aatttatcct taagcaaaat tacgttataa tagtaatgat aaattaggag gagaagcata
      181 tggtgttata tatcattttg gcaataattg tgattatatt gattgctgta ggtgtattat
      241 tctatttacg ttcaaataaa cgacaaatta ttgaaaaagc aatcgaacgt aaaaatgaaa
      301 ttgagacgtt accttttgat caaaaccttg cacaattatc taagttgaat ttaaaaggtg
      361 aaacaaaaac gaaatacgat gcaatgaaaa aggacaacgt agaaagtaca aataagtatc
      421 tagctcctgt ggaagaaaaa atccataatg ctgaggcttt attagataaa tttagtttca
      481 acgcatctca aagtgaaatt gatgatgcaa atgagttgat ggatagttac gaacaaagct
      541 atcagcaaca attagaagat gtaaatgaaa ttattgcgtt atacaaagat aatgatgaat
      601 tatatgacaa atgtaaggtt gattatcgtg aaatgaaacg tgatgtttta gcaaatcgtc
      661 atcaatttgg tgaggcagca agtcttcttg aaactgaaat tgaaaaattt gagccaaggt
      721 tagagcaata tgaagtacta aaagctgatg gtaattatgt acaagcgcac aaccatatag
      781 ctgccttgaa tgaacaaatg aaacagctaa gatcttatat ggaagaaata ccagaattaa
      841 ttagagaaac tcaaaaagaa ttgcctggtc aattccaaga tttaaaatat ggttgccgtg
      901 atcttaaagt tgaagggtat gatctggatc acgtaaaagt agacagtaca ttacaaagct
      961 taaaaacaga gcttagtttt gttgaaccat taattagccg cttagaatta gaagaagcta
     1021 atgataaact agctaatatc aatgataagt tagatgacat gtatgattta attgaacatg
     1081 aagttaaagc taaaaatgat gtcgaagaaa caaaagatat cattacggat aacttattca
     1141 aagctaaaga catgaattat acattgcaaa cagaaattga atatgtacgt gaaaactact
     1201 atataaatga atctgatgct caaagtgttc gtcaatttga aaatgaaatt caaagtttaa
     1261 tttctgtata tgatgatatt ttaaaagaaa tgtctaaatc tgctgtacga tatagcgagg
     1321 ttcaggataa tttacaatat ttagaagatc atgtcacagt tattaatgac aaacaagaaa
     1381 agctacaaaa tcatctaatt caattgcgtg aagatgaagc agaagcagaa gacaatctgc
     1441 tacgagtaca atcgaagaaa gaagaagtgt atcgtcgatt acttgcttct aacttaacaa
     1501 gcgttcctga aaggtttatc atcatgaaaa atgaaattga tcatgaagtt cgtgatgtta
     1561 acgaacaatt tagtgaacgt ccaatacacg ttaaacagtt aaaagataaa gtgtctaaaa
     1621 ttgtgattca aatgaataca tttgaagatg aagcaaatga tgttcttgtt aatgctgttt
     1681 atgcagagaa attaattcaa tatggaaata gatatcgtaa ggactatagc aatgttgata
     1741 agagcttaaa tgaagctgaa cgattattta aaaataatcg ctataagcgt gcgattgaaa
     1801 ttgcagagca agctcttgaa agtgttgagc caggtgtcac taaacatatt gaagaagaag
     1861 ttattaagca atagcattta ttaaacttaa tcgtatttta cgaagtgata ggagttagcc
     1921 aactgtatgt tgtctagctt cttttttata tggatatatg aaagggagaa tcaatttagc
     1981 aatcgtttta agataaatgt cattcaatgt gatggttgaa ttaatgtagg tagtgaaaat
     2041 gcatcgttct atgtattgag tgaaatagtt caattcatat taaaatgggt ggaaaaatga
     2101 ttaatttctg ctatagcctt tattttttat gtgataatag tataatgctt gagtaaaaac
     2161 aattttaaaa gattgatgat taatgaaaga gaagtgttta ttttgatata tctagataat
     2221 gcggcaacga cgaaagcatt tgaagaagtg ttatatactt atttaaaagt aaatcaatca
     2281 atgtatgtta atcctaatag tccgcataaa gctggtttgc aggcaaatca attattacag
     2341 caagcaaaag ctcaaataaa tgatatggtc aatactaata tgacatatga tgttgttttc
     2401 actagcggtg caacggaatc taataatatc gcgcttaaag gtgtggctta tcgtaaattt
     2461 gatacagcaa gagaaataat tacatctgtt ttagaacatc cgtctgtttt agaagttgtc
     2521 agatatttgg aagagcgcga aggctttaaa gttaaatatg ttgatgtaac aaaagatggc
     2581 actattgatt tgcaacattt taacgattta atgtccgata aagtcggttt agtaacatgt
     2641 atgtatgtaa ataatgtgac aggtcaaatt caacccattc caaagatggc tgaaacgtta
     2701 aaaaattatc ctaaagcaca ttttcatgta gatgcggttc aagcgtttgg taaagtagct
     2761 atggatttaa caaatgtaga tagtattagt ttaagtggac acaagtttaa tggtttaaaa
     2821 ggtcaaggcg ttttacttgt aaatcacatt caaaatgttg aaccgactgt ccatggtggt
     2881 ggtcaagaat atggcgttag aagtggaaca gttaatttgc caaatgatat tgcaatggtt
     2941 aaagcgatga agatagctaa tgaaaacctt gaagcattga atgcatttgt tactgagata
     3001 aataatgacg tccgtcaatt tttaaataag tatcatggag tttatattaa ttcttcaact
     3061 tcaggttcac cattcgtttt aaatattagt tttcctggcg taaaaggtga agtattagtt
     3121 aatgcttttt caaaatatga cattatgata tctacgacga gtgcttgttc atctaaacgt
     3181 aataaattaa atgaagtatt ggctgcaatg ggattatcag acaagtctat tgaaggtagt
     3241 ataagattat catttggggc tactacaact aaagaagata tagcaaggtt taaagaaata
     3301 tttataatca tttatgagga aattaaggag ttgctaaaat aatgaagtat gatcacttgc
     3361 ttgttagata cggggagtta acattaaagg gttcaaatag aaagaaattt gtaaatcaat
     3421 taagaaataa tgtaaataag tcattaaaag gacttgatgg gtttgtcgtt aaaggcaaac
     3481 gagatcgtat gtatattgaa cttgaagatc atgcagatat aaatgaaata acatatcgat
     3541 tatcaaaaat tttcggtatt aaatcaatta gtccggtgct aaaaattgag aaaacaatag
     3601 aagctatgcg tgaagcagca attaagtttg cacaaacatt tgaaaatgac agtacattta
     3661 aaattgatgt aaagcgggct gacaaaaatt atccaatgga tacgtatgaa ttacagcgtg
     3721 aattgggtgg tgcagtattg aagcacttcg acaatatttc agtgaatgtt aaacgaccag
     3781 atcatgaaat tagagtagaa gttagattag atgcaattta tatgtatgaa gaagtggtag
     3841 ctggtgctgg tggtttacca gtaggtacag gtggtaaaac gttgctaatg ctttcaggag
     3901 gcatagactc accagttgct gggatggaag tgatgagacg aggcgtaaca attgaagcga
     3961 ttcatttcca tagtccacca tttacaagtg atcaagcaaa agaaaaagtt attgaattga
     4021 cacgtatttt agctgaacgt gttggaccaa ttaaattgca tattgtacca tttacagaat
     4081 tgcaaaaaca ggtaaataaa gttgtacatc caagatatac aatgacttca acgagacgta
     4141 tgatgatgcg tgttgctgat aaattagtac atcaaatagg ggctttagct attgtaaatg
     4201 gtgaaaacct agggcaggta gctagtcaaa cacttcatag catgtatgca attaataatg
     4261 tgacgtctac ccctgtatta cgtcctttat taacttacga taaagaagaa attattatta
     4321 aatcgaaaga aattggtaca tttgaaacat ctattcaacc atttgaagat tgttgtacaa
     4381 ttttcacccc taaaaatcca gtaaccgaac caaactttga taaggtagtt caatatgaaa
     4441 gtgtctttga ttttgaagag atgattaatc gtgctgttga aaatattgaa acacttgaaa
     4501 taactagtga ttataaaact attaaagaac agcaaacaaa ccaattaata aacgactttt
     4561 tataaataaa atcctagagt aaatttaaac ataaggggat gttaaactat ggatttgaac
     4621 ttaacgatga ttataatcat aattttattt ggttttatcg cggcgtttat agattcggtt
     4681 gtagggggtg gcggtttaat ttctacgcca gcattattag caatcggtct accaccatct
     4741 gtggctttag gtacaaataa attggcaagt tcatttggtt ctttaactag tacgataaag
     4801 tttataaggt ccggtaaagt ggacttatat gttgttgcca aattatttgg ttttgtattt
     4861 ttggcatctg catgtggagc atatattgca acgatggttc cgtcacaaat attgaaacct
     4921 ttaatcatta ttgcactttc gtcggtgttt atattcacat tacttaaaaa agattggggc
     4981 aatacacgta cgtttactca atttacattt aagaaagcca tactatttgc agcacttttt
     5041 atattaatcg gcttttatga tggatttgta ggtgggggaa caggttcatt tatgcttttt
     5101 gtattgttag tctttggttt tgatttttta agtgctgcag gaaatgctaa agttttgaac
     5161 tttgcttcta atataggtgc gcttgtatta tttatggtat taggacaagt agattatgta
     5221 ataggtttaa ttatggctac aagcatgatt gctgggtcat atactggggc tcattttgct
     5281 atcaaacaag gtgttggcta tgtaaaagta ttatttatta ttattactgc gattttaatt
     5341 ttaaaaaatg cttttgatta tattcaacaa tttgtataaa attaaatttg cttttgatta
     5401 aagcatgaaa attgtaatca aaccataaat tgtcgtatga tgtagttaga attttaaaat
     5461 gcaggaggtc aagtatatga ctgaaataac attcaaaggt ggaccaatcc acttaaaagg
     5521 tcaacaaatt aatgaaggtg attttgcacc tgattttaca gtgttagata atgacttaaa
     5581 tcaagtaaca ttagcagatt atgctggtaa aaagaaatta attagtgtgg taccatcaat
     5641 tgatacaggt gtttgtgatc agcagactcg caaattcaac tctgaagctt ctaaagaaga
     5701 ggggattgtg cttacaatct cagcagactt accattcgca caaaaaagat ggtgcgcgtc
     5761 tgcaggttta gacaatgtca ttacattaag tgaccaccgt gacttatcat ttggtgaaaa
     5821 ctatggcgtt gttatggaag aacttcgctt attagctcgt gcagtatttg tattagatgc
     5881 agataataaa gttgtttata aagaaatcgt tagtgaaggt actgatttcc cagattttga
     5941 tgctgcttta gctgcataca aaaatattta atcattaaag agataaatct taaaatgtat
     6001 acatcgtgtc catcgttgtc aacagcatta aaatagaatt gttttctatg attgctaaga
     6061 cctatgggca ctttttattg gagagggacg aatatggcag aacaacaaac aattatggaa
     6121 cgcttgtttc atacattaga tgaaaaagct aaaacattaa ataatgaaaa tggccaaagt
     6181 tttattgaaa atcttggact agcaatggaa caagtatata ccaatgaaag aggattgtta
     6241 gaacaatcga cgttacaaga tcgacgtaaa gcattccaat ttgcatattt aagtttaatg
     6301 caggaagaaa agatacaagc aaatcatcaa attacaccag attcaattgg cttgatacta
     6361 ggatttttag ttgagcgttt tatgaacaac caagaagaat tacatattgt tgatattgca
     6421 agtggtgtcg gtcatttaag tgctactgta aaagaagtgt tacctgaaat tgcggttatg
     6481 catcatttaa ttgaagttga tccagtttta tcacgtgtta gtgtacattt agcaaacttc
     6541 ttagaaattc ctttcgatgt gtatcctcaa gatgccatta tgccactacc attagaagaa
     6601 gcagatatcg ttattggtga ttttccagta ggctattatc caattgatga aagaagtaag
     6661 gagtttaagc taggtttcga aaaaggacat agttattcac attatttatt aatagaacaa
     6721 gcaataaatg cattaaaaga tgctggatat gcctttctag tggtaccgag taatattttt
     6781 acaggcgaac atgtaaaaca gcttgaaaaa tatattgcaa cagagacaga gatgcaagca
     6841 tttttaaatt taccaccaac tttatttaaa aatgaaaaag cgcgaaaatc tatattaatt
     6901 ttacaaaaga aaaaatcggg tgaaacaaag ccagttgaag tattattggc aaatattcct
     6961 gatttcaaaa atccttcaca atttcaagga tttatgacag agttaaatca gtggatggac
     7021 acaaatcgtc ctaaaaaata atctgtaata gtatagtcat aaaactgtat gaatgataaa
     7081 atgagaaatg aaatagtata aaaagcaaac gatggaggat cattacttat gtcaaaatta
     7141 atcttggcta tcaatgctgg tagttcatca ttaaaatttc aattaattag aatgcctgaa
     7201 gaggaattag taacaaaagg tttagtagaa agaatcggat tgaaggattc aatttttaca
     7261 attgaagtca acggggaaaa agttaaaaca gtacaagata tcaaggatca cgttgaggca
     7321 gttgatatca tgttggatgc ttttaaagcg cacaatatta ttaatgatat taacgatatc
     7381 gatggaacag gtcaccgtgt tgtacatggt ggtgaaaaat tccctgaatc agtagctatt
     7441 actgacgagg ttgaaaagga aattgaagaa ttaagcgaat tagcaccgct tcacaaccca
     7501 gctaacttga tgggtattcg tgctttccgt aaattattac caaatatccc tcatgtggca
     7561 atttttgata cagcattcca tcaaacaatg cctgaaaaag catatctata tagcttgcca
     7621 tatcattatt ataaagatta tggcattcgt aagtatggtt tccatggtac aagccataaa
     7681 tttgtatcac aaagagcggc agaaatgtta gataagccaa ttgaagattt acgtattatt
     7741 tcatgtcaca ttggtaatgg agcatcaatt gcagcgatcg atggcggtaa atctattgat
     7801 acatcaatgg gcttcacacc acttgctggt gtaacaatgg gtactcgttc tggtaatatt
     7861 gaccctgctt taattccatt tattatggaa aaaactggta aaactgctga acaagtattg
     7921 gaaatcttaa acaaagagtc aggtttatta ggattatcag gtacatctag tgatttacgt
     7981 gacttatcag aagaagctga atcaggtaaa gcacgttcac aaatggcttt agatgtattt
     8041 gcttctaaaa ttcacaaata tattggatca tatgctgcga gaatgcatgg tgttgatgtt
     8101 atcgtattta cagcaggtat cggtgaaaac tcagtagaaa ttcgtgcgaa agttcttgaa
     8161 ggcttagaat ttatgggtgt ttattgggat cctaagaaaa atgaaaactt actacgtggt
     8221 aaagaaggat ttattaacta tcctcattca ccagttaaag ttgtcgttat tccaacagat
     8281 gaagaaagta tgattgcccg tgatgttatg acattcggtg gtttaaaata attttttaat
     8341 aaatattaag cgtctatctc cgctacaatt atatgtagga ggtagacgct ttttgtattg
     8401 tttgaaaatt aactagtgta atgtctcttt tcgcgaatat cttaaaaatt gagtagtcga
     8461 agaagattat gaaaacatta ttaaatgagt tttatttata aacaataaaa aaaccaagtg
     8521 cagacagttg cacttggttc ataatgatca agtagttatc taatgatcat ctatatttaa
     8581 ttttgatatt tttcacgtaa ttgagttgtt gcaacttgtg gttggaagtc tgctggtaac
     8641 tcttcagtac gaacaactaa cacgtcacat ggtgcatgac gaacgataga ttctgataca
     8701 gaaccaacaa taaatctttc cacggcattt aagcctgatg taccactcat aatcaagtct
     8761 gcattaattt catgtgcaag ctttttagga atgatagatt taggagagcc aaactctaga
     8821 cgcgtttcta catctttaac accagcgtta gtagctactt ctttataacc atttaataat
     8881 tcttctgcaa aatgcttaga tttttcagta aattgagcat cataaacttc ataagaagaa
     8941 tatgttcttg aatcaattac attcacaatt gttaacttcg catcgttacg tttagcaaca
     9001 ccaactgctc tgttaaatgc ccattccgct tcatgtgaac cgtcaactgc gattaaaata
     9061 tttttgtaag taatcatagt aagtgcctcc ttgttctttc ttaattatat tttaccacaa
     9121 ttttcggaaa agtcagtgta ataaccttta caattttgtg gatttttgat tgcgctttca
     9181 aaatgttcgc gttaagatga ttatggaggt ggatggtatg aaaattggta taccaaggga
     9241 gattaaaaat aatgaaaatc gtgttggttt atcaccaagt ggtgtgcacg ctttagtaga
     9301 aagtgggcat actgttttag tggaaacaaa tgcgggttca ggatcgttct ttgaagatgt
     9361 agattacaaa gaagcaggtg ctgagattgt tgctgaacaa gcaaaagttt gggatgtgga
     9421 tatggttatt aaagttaaag aaccacttga atctgaatat ccatatttta aagaagggct
     9481 tgtattattc acttatcttc atttagcaaa tgaagaaaaa ttaacacaag ctttgataga
     9541 tagaaaagta attagtattg catatgagac tgtgcagtta ccagaccgat ctttaccatt
     9601 gttatcacca atgagtgagg tagcaggaag aatgtccgct caagttggcg cagagttcct
     9661 acaaaaactt aatggtggta tgggaattct actaggtggc gttccaggag tacctaaagg
     9721 taaagtaact attatcggtg gtggtcaagc aggaacaaat gcagctaaaa ttgcactagg
     9781 actaggtgca gatgttacga ttttagatgt gaatccaaag cgtttacaac aattagatga
     9841 tttattcggt ggacgtgtac atacaattat gtcaaatccg ttgaatattg agttgtatgt
     9901 taaacaaagt gatttagtaa taggtgcagt tttaattcca ggtgctaaag cgccaagact
     9961 tgtaacagaa gacatgatta aacaaatgaa aaatgggtca gttattattg acattgctat
    10021 tgatcaaggc ggtatttttg aaacaactga taaaattacg acacatgatg atcctacata
    10081 tattaagcat ggtgtggttc attatgcagt tgcaaatatg ccaggtgcag taccgcgtac
    10141 ttcgacgtta gctttaaata atgctacgct accttatgcg ctcatgctag ctaataaagg
    10201 gtatagagaa gcatttaaat caaatcaacc attatcatta ggtttaaata cttacaaagg
    10261 tcacgtaacc aataaaggcg ttgcagaggc atttgaaatg gaatataaat ctgtagaaga
    10321 agcattacaa ttataatttg aatttaatga aaagggaatg gattacagcg tactaaagaa
    10381 tgacgttttc atctccttgg ttattaaaat taaataatga taaattaaag ctagaaacaa
    10441 tgcgaagaaa tcatcgaaca tgaatgatat tgatttgatt cattacatgt tactgatgaa
    10501 tgtacctgca tatgtgtttc tagcttgttt gttatatatt gcagttagac ttggacaaaa
    10561 atttatgttt taggcgctac aatgttgtat tgtcagtgtt tgactgaatg agaatgcgct
    10621 tgtaacaagc ttttcatttt tgtcccactc cttatttttc gtaatgtgtt aatacttcgt
    10681 atccttcatt agtgacaagt atgtcatctt caattcttac acctgcaaca ccaggtacat
    10741 aaatacctgg ttcgattgta ataaccatgc cagcttctaa caaattagaa ttagtacttg
    10801 aaacatcttg atattcatgt tcttgtaatc ctagaccatg acctaagcga tgagggaaat
    10861 attcaccata acctttttct gaaataatat ttctagcgat atgatcgata tcttttaaag
    10921 gtattccagg tttaattgct tggattgcag atgtttctgc ttctaataca atattataaa
    10981 tttcttgtgc ttctttgtta ggttcaccaa atttgatggt acgtgtcata tcgctacaat
    11041 aatgctcata aattacacct aaatcaaata gtacatactc attgcttttt aatctgcgat
    11101 ctcctggtgt gccatggggt gatgcggcat gatctccaaa taaaaccatc gtatcaaaac
    11161 tcatttcatt gacgccatat tgtttgatag tttgctcaat atggttgact acttcacgtt
    11221 cagtcacacc ttcttttaaa taagaaacac caatttcgat acacttatct gctaactcag
    11281 cagctttacg tattttgcta atttcatctt cggatttaat atttctcaat tgtttgattg
    11341 ttaaatcaac atctccgaat gaattgacat tgaaaccaga ggttaattgt ttttggcgtg
    11401 ctactgttaa gtgctcgctt tcaattagta atttattgat tgtttgagga taaagtgaaa
    11461 aaggattttc agtgtctaaa tatccaacga tttcacctgt gaaaggtgat gctttgactt
    11521 cttcgacttc catttttgga caaaatagta cttgtttacc atctttctta atcaataatg
    11581 caaataatct ttcatggggt tcgctacggt atccagtaaa ataatataca ttcaacggtg
    11641 ttgtaatcca tgctgcatca gcttgttgat tgttcagttc gtctattatt tttgatattt
    11701 ttgtcatttt ataaacactc ctcaacataa tattacttac attttatgcc aattattatt
    11761 agatttcaaa atcgagctaa tacattaact agattttcaa tttttaaaat ttgagaattt
    11821 gttataatta agtggcaaaa gggtactaaa tttatatagc aattgatagg aggatgctca
    11881 aatgaagtta tcatttcatg gtcaatcaac gatttattta gaagggaaca acaaaaaggt
    11941 tatcgtagat ccgtttatat caaataaccc taagtgtgat ttgaatattg aaacagtgca
    12001 ggtagactat atcgttttaa cgcacggtca ttttgatcac tttggtgatg ttgtggaact
    12061 agcaaagaaa acaggagcaa cagtaattgg aagtgcagaa atggctgact atctttcttc
    12121 atatcacggt gttgaaaatg ttcatggtat gaatattggt ggtaaagcaa actttgattt
    12181 cggaagcgtt aaatttgttc aagcatttca tagttcaagt tttacacatg aaaatggtat
    12241 tccagtttat ttaggtatgc caatgggtat cgtgtttgaa gttgaaggaa aaacaattta
    12301 tcatactggt gatacaggtc tgtttagtga catgtcactt attgcgaaac gtcatccagt
    12361 tgatgtatgt tttgtaccaa ttggagataa ttttacgatg ggtattgatg atgcaagtta
    12421 tgctattaat gaatttatta aaccaaaaat ttctgtaccg attcattatg atacattccc
    12481 attaatcgaa caagatccac aacaatttaa agatgctgtt aatgtagggg acgtgcaaat
    12541 tttaaaacca ggtgaatctg ttcagtttta aatagaatat agattttaca ctaaaaaaca
    12601 cctcgctaat ctatgtggaa gttatcgtcc gcatattttt agtgagtgtt tttatattct
    12661 actgatattg taagctgact ttttcgtcag cttccatgtt ggggcccagc ccaacttgca
    12721 ttgtctgtag aatttctttt cgaaattctc tatgttgggg ccccatagtc aactcctgct
    12781 gggttatgat attgattatg tttttggttc aaaatggttt tgtttgatac aagttgttgg
    12841 ttaaatagtg aataatataa aaaaaccaga accacagtca taatcatttc ttgtgtttac
    12901 tcagtcgttt gagactgcat catgattgaa agattatttg tgattctgga taaaaatttt
    12961 atttaacgat taatacaggg atagtcgcac gttttgctac tttgtggctg acacttccaa
    13021 gtacaaattt ctttttgtct tctgctttac ggttacttaa aacaacaatt tcgtatttac
    13081 cgctattagc atgttttaat agttcttctt ttgcattacc acgaacaatt atttggtcat
    13141 aatcaatacc ataatcttct aaagctttgc gtgttttttc caatcgcttg cttcgttctt
    13201 cagtaagttt gtttaaatga acacctgctt taattgatgc ttgagcatct tgttcgctga
    13261 ttgcgtttaa aactgttacg actgtacctt cgccagctaa tttagacact tcttttagtg
    13321 ctttttcatt tttcaactgg gtgtctacac caagtaatat atttttatac attagtacat
    13381 ccctcctcac ttacattcta ataaataata atggattttt ccatttaaaa ttaaagattt
    13441 tgtgatcttt gtgtttgttg tatattttca aaaaataaaa taggtgaaac gatcattatt
    13501 tcatttcact tcaatgcttt ttatccaaaa taaagttata atgtagttaa tactgttcga
    13561 aaagaagagg taaagaatga caaaacatga acaaatttta gattatattg aatcgttatc
    13621 tataggctct aaaatttcgg tgcgtaaaat cgctaaattt ttaaacgtat ctgaagggac
    13681 agcatatcgt gcaattaaag atgctgataa aatgggcatg gtcgcaacga tagatcgtgt
    13741 tggtacggtt cgaatcgaaa aacgtaatcg taatgaaatt gaacatttaa cttttaatga
    13801 aattgtcaat attattgatg gccaagtgtt aggtggcaac aaaggtatca ctaagatggt
    13861 gtctaaattt gcaattggag caatggaact caaagatatt ttaaagtata ttggtccaaa
    13921 gacattattg attgtcggaa atcgcgaaga tgtgcagatt gaagctttaa aaagaggcac
    13981 ggctatatta attactggtg gatttaagcc atctaataaa gttattaatt ttgcgaatga
    14041 acatgattta cctgttctat catcaagtta tgatacattc ctagttgcaa atattatcaa
    14101 caaagcactt tttaatcaga aaatacgaaa agatatctta atagttcaag atataatgac
    14161 gccattagat gatttatctg tgctgtttga tacgatgaaa atagcagatt ataagcgtat
    14221 ggcgaatcga actggccata caagatttcc ggtagttaat gagtcttata aattagtagg
    14281 tattgtaaca agtcgagaga tgattaatac aaaggacgac gacgaaatag ataaagtgat
    14341 gacgcgaaat cctatttatg taaatgctat gagtacagta gcaagttgtg cgcatatgat
    14401 gatttgggaa ggtattgaat tgattcctgt cgtttcgagt aataaaaaga cagtgggtgt
    14461 gattaataga caagatgttt taaagtctat gcaactttta ggaagacagc ctcaaatggg
    14521 tgaaacaatt aacgatcaaa tcgccaaata tataacaatg aatcaagatg gaattacagt
    14581 agaagtttca ccactgttaa tcaatcacta cggaacagta agtaaagcgg catttgtaag
    14641 cattatagaa gaaacaatac aatatgaaat gcgtaaattt aaaaaaggta atgtcatgat
    14701 agagaattta aatatcgtgt atattaaaac agtacctatt gaatcacata taacagtgcg
    14761 cttcggcata ctagacgtcg gaagaaactt cgccaaaata gaagtgaaca tgcatagtca
    14821 aaacgacaaa gtagcgagcg ctctcgtgat atgccaaatg tttgacgaag tataggaact
    14881 tagcagagaa aataggcata agatagattt cacacaaatg ttggagtcca acttgcattg
    14941 tctgtagaat ttcttttcga aattctctat gttgggtccc accccaactt gcattgtttg
    15001 tagaatttct tttcgaaatt ctttgtgttg ggggcccacc ccaacttgca cattatagta
    15061 agctgacatt acgtcacctt ctatgttggg gcccctgaat taaaaagctt gttatatgtg
    15121 tattttttat ttggtcaact gttgctaata taatattgat tgatgtccta tactcgttat
    15181 gaactaatta gtatgaaaat atatatctaa ataattaaaa cgggcaaata gtttaatatg
    15241 gtagttacaa tttttataat ttagatattt tgatatagac taatgcttaa attaagcaac
    15301 ttttctaaaa aagggagtat gaaaatgatt agtactttga atgaaattat gaaatgtatc
    15361 gaagacaacg atacaattat tatacacaga catgttagac cagatcctga tgcatatggt
    15421 tcacaacttg gtttaaaata ctatattcag cagaaatttc cgcaaaagca agtatttgca
    15481 gtgggtgaag cggaatcatc attaagtttt attggagagt tagataacat tgatgataaa
    15541 acatatcaag atgcgcttgt aattgtatgt gatactgcca atgctccacg aattgacgat
    15601 gaacgttata gtacaggtag taaacttatt aaaatagatc atcatcctgc agttgatcag
    15661 tatggtgata ttaatttagt taatacgaac gcgtcatcta caagtgaaat catttatgat
    15721 ttaatctcac attttaatga tgaagcaatt gttaataaag atatcgcgag tgttttatac
    15781 cttggtatcg tcggtgatac tgggcgattc ctttttaaca atacctcaga acatacaatg
    15841 gaaattgctg gaaagttaat tggacatgat attgatcata atgtgctttt aaataaaatg
    15901 atggagaagg atccaaaaat gttgccgttt caaggttatg ttttacaaca tttcgaactt
    15961 atggatgatg gattctgcca agttaaaata actgaagatg tattggagca attcggtatt
    16021 cagccaaatg aagcatctca gtttgttaat acaattgctg acatcaaagg tttgaaaata
    16081 tgggtgtttg cagttgatga gggtagtgaa ataagatgtc gcttacgctc taaaggtcaa
    16141 ttgattatta atgatattgc gcaagatttt ggtggcggtg gtcatccgaa tgcgtcagga
    16201 gtttcagtga acagctggga tgaatttgag caacttgcta cagctttacg cacaaaactt
    16261 aactaataga aaggagccat tcaatcatgg tggcatattt aaatattcat acggcttatg
    16321 atttgttaaa ttcaagctta aaaatagaag atgccgtaag acttgctgtg tctgaaaatg
    16381 ttgatgcact tgccataact gacaccaatg tattgtatgg ttttcctaaa ttttatgatg
    16441 catgtatagc aaataacatt aaaccgattt ttggtatgac aatatatgtg acaaacggtt
    16501 taaacactat tgaaaccgtt gttttagcaa aagataataa tggattaaaa gatttgtatc
    16561 aactatcatc ggaaataaaa atgaatgcat tagaacatgt gtcgtttgaa ttattaaaac
    16621 gattttctaa caatatgatt atcattttta aaaaagtcgg tgatcaacat cgtgatattg
    16681 tacaagtgtt tgaaacccat aatgacacat atatggacca ccttagtatt tcgattcagg
    16741 gtataaagca cgtatggatt caaaatgttt gttaccaaac acgtcaagat gccgatacga
    16801 tttctgcatt agcagctatt agagacaata caaaattaga cttaattcat gatcaagaag
    16861 attttggtgc acatttttta actgaaaagg aaattaaaca attagatatt aaccaagaat
    16921 atttaacgca ggttgatgtt atagctcaaa agtgtaatgc agaattaaaa tatcatcaat
    16981 ctctacttcc tcaatatcag acaccaaatg atgaatcagc taaaaaatat ttgtggcgtg
    17041 tcttagttac acaattaaaa aaattagaac ttaattatga cgtctattta gagcgattga
    17101 aatatgagta taaagttatt actaatatgg gttttgaaga ttatttctta atagtaagtg
    17161 atttaatcca ttatgcgaaa acgaatgatg tgatggtagg tccaggtcgt ggttcttcag
    17221 ctggctcact ggtcagttat ttactaggta ttacaacgat tgatcctatt aaattcaatc
    17281 tattatttga acgtttttta aacccagaac gtgtaacaat gcctgatata gatattgact
    17341 ttgaagatac acgccgagaa agggtcattc agtacgtcca agaaaaatat ggcgagctac
    17401 atgtatctgg aattgtgact ttcggtcatc tgcttgcaag agcggttgct agagatgttg
    17461 gacgaattat ggggtttgat gaagttacat taaatgaaat ttcaagttta atcccacata
    17521 aattaggaat tacacttgat gaagcatatc aaattgacga ttttaaaaaa tttgtacatc
    17581 gaaaccatcg acatgaacgc tggttcagta tttgtaaaaa gttagaaggt ttaccaagac
    17641 atacatctac acatgcggca ggaattatta ttaatgacca tccattatat gaatatgccc
    17701 ctttaacgaa aggggataca ggattattaa cgcaatggac aatgactgaa gccgaacgaa
    17761 ttgggttatt aaaaatagat tttctagggt tgagaaactt atcgattatt catcaaatct
    17821 taatacaagt caaaaaagat ttaggtatta atattgatat cgaaaagatt ccgttcgatg
    17881 atcaaaaagt gtttgaattg ttgtcgcaag gagatacgac tggcatattc caattagagt
    17941 ctgacggtgt aagaagtgta ttaaaaaaat taaagccgga acactttgaa gatattgttg
    18001 ctgtaacttc tttgtataga ccaggtccaa tggaagaaat tccaacttac attacaagaa
    18061 gacatgatcc aagcaaagtt caatatttac atccacattt agaacctata ttaaaaaata
    18121 cttacggtgt tattatttat caagagcaaa ttatgcaaat agcgagcaca tttgcaaact
    18181 tcagttatgg tgaagcggat attttaagaa gagcaatgag taaaaaaaat agagctgttc
    18241 ttgaaagtga gcgtcaacat tttatagaag gtgcaaagga aaatggttat cacgaagaca
    18301 ttagtaagca aatatttgat ttgattctga aatttgcaga ttatggtttt cctagagcac
    18361 atgctgtcag ctattctaaa attgcataca ttatgagctt tttaaaagtc cattatccaa
    18421 attattttta cgcaaatatt ttaagtaatg ttattggaag tgagaagaaa actgctcaaa
    18481 tgatagaaga agcaaaaaaa caaggtatca ctatattgcc accgaacatt aacgaaagtc
    18541 attggtttta taaaccttcc catgaaggta tttatttatc aataggtaca attaaaggtg
    18601 taggttatca aagtgtaaaa gtgattgttg atgaacgtta tcagaacggc aaatttaaag
    18661 atttctttga ttttgctaga cgtataccga agcgagtcaa aacaagaaag ttacttgaag
    18721 cactgatttt agtgggagca tttgatgctt ttggtaaaac acgttcaacg ttgttacaag
    18781 ctattgatca agtgttggat ggtgatttaa acattgaaca agatggtttt ctatttgata
    18841 ttttaacgcc aaaacagatg tatgaagata aagaagaatt gcctgatgca cttattagtc
    18901 agtatgaaaa agaatattta ggattttatg tttcacaaca tccagtagat aaaatgtttg
    18961 ttgccaaaca atatttaacg atatttaaat tgagtaacgc gcagaataat aagcctatat
    19021 tagtgcagtt tgataaagtt aaacaaattc gaactaaaaa tggtcaaaat atggcattcg
    19081 tcacattaaa tgatggcatc gaaactttag atggtgtgat tttccctaat cagtttaaaa
    19141 agtacgaaga gttgttatca cataatgact tgtttatagt cagcgggaaa tttgaccata
    19201 gaaagcaaca acgtcaacta attataaatg agattcaaac attagccact tttgaagaac
    19261 aaaaattagc atttgccaaa caaattataa ttagaaataa atcacatata gatacgtttg
    19321 aagagatgat taaagctacg aaagaaaatg ccaatgatgt tgtgttatcc ttttatgatg
    19381 aaacgattaa acaaatgact actttaggat atattaatca aaaagatagt atgtttaata
    19441 attttataca atcctttaac cctagtgata ttaggcttat ataactttta tcaactaata
    19501 aattatgata tagtaaactg atggttagat attttttaac catcagtttg cgtttatatt
    19561 agttttttat gcttattatt tttatgagtt tcactttaca ttattgatta atccataaga
    19621 ataattagca caaaaagcag tatacataaa ttgagtaaag aattttgtcg atatatcgta
    19681 cgaaaaaata ataacttttt gatatattgg tttttgctat ccattataat aattaaaggt
    19741 atatctttag atagtatggt ttaatgtatc tttaaaaata ttattttatt atcgtttatc
    19801 gctatttgtg ttacataatc aaaagcataa attcttactc attcagattt acccaatatt
    19861 tttactttta taatgtaatg cgttttatcc aagttatttt ttaaaaataa atattgaatt
    19921 aggggctgat ttcatgtcat taagagatga agcattggaa atgcacaaac gtaatcaagg
    19981 taaattagaa gttaaaccaa atgtaaaagt tactaataaa gaggaattaa gtttagcata
    20041 ctcacctggc gttgctgaac cgtgtaaaga tatttatgaa gataaaagga aagtgtatga
    20101 ttacacaatt aaaggaaata cagttgcggt tattactgat ggaacagcgg tattaggttt
    20161 aggtaacatt ggacctgaag caagtattcc tgtaatggaa ggtaaagcag tattattcaa
    20221 aagcttcgct ggtatcaatg gggtgcctat tgcgttaaat acaactgata ccgaagaaat
    20281 cattaaaaca gttaagttgt tagaacctaa ttatggtggt attaatttag aggatatttc
    20341 ggcaccacgt tgttttgaaa ttgaagaacg attgaaaaaa gaaactaata ttccggtatt
    20401 ccatgacgat caacatggta cagcaattgt aacaatggca ggtttggtaa atgcattgag
    20461 agttgttaac aaagatattg ctaaaataaa agttgtacta aatggtgctg gtgcagcagg
    20521 aatagccatt gttaaattac tatacgcgta tggtgtaaga aatatggtta tgtgtgactc
    20581 aagaggcgca atttttgaag gacgttcata tggtatgaat cctacgaaag atgttgtagc
    20641 taaatggaca aataaagata agattgaagg gtctttagaa gaagtcgtaa aagacgcaga
    20701 tgtatttatt ggagtttctg tagctaatgc gctgtcacaa gatatggtta agagtatggc
    20761 agataatcca attatatttg caatggctaa tccaaatcct gaaataatac ctgatgatgc
    20821 caaagcggca ggtgcacgag ttgttggtac aggacgttca gactatccta accaaattaa
    20881 taatgtatta gcttttcctg gtatttttag aggtgcatta gaggttgaag ctacacatat
    20941 aaatgaagaa atgaaaaagg cagctgtaga agcgattgct gatttaatag atagttctga
    21001 attaaatgaa gactactgta tcccaggacc gtttgataaa cgtgtggcgc catcagttgc
    21061 tcgtaatgtt gctaaagcgg caatggaatc tggagtagct aggattgaag ttaatccgca
    21121 agatgtgtat gataaaacaa tgaaacttac agatttacaa taaaaataat taacgtttaa
    21181 ttaaattgct taaaagttag caataaagag tcattaaaat gatgaaaatg aaagtttatg
    21241 ataaacattc aacagtcaaa cgaatataaa tcaaataaat ttaaacccgt ttttaactgg
    21301 tcaagttcag tttaaggctc taaatggtta gaacagaggt tatttggagg ttttcctatg
    21361 tttaaagatt tttttaatcg aacaaagaaa aagaaatatc ttacagtaca agactctaaa
    21421 aataatgatg tgcctgcagg tattatgact aagtgtccaa agtgtaagaa aattatgtac
    21481 acaaaagaat tagctgaaaa tttaaatgtg tgctttaatt gtgatcatca tattccttta
    21541 actgcgtata aacgtataga agcaatttct gatgaaggat catttacaga attcgataag
    21601 ggaatgacct ctgcgaatcc attagatttt ccaagttata tagaaaaaat tgaaaaggac
    21661 caacaaaaga caggtcttaa agaagcagta gtgactggta cagcgcaact agatggtatg
    21721 aaatttggcg ttgctgtcat ggattcacgt tttagaatgg gaagtatggg atcggttatc
    21781 ggtgaaaaga tatgtcgcat cattgattac tgcactgaga accgtttacc atttattctt
    21841 ttctctgcaa gtggtggtgc acgtatgcaa gaaggtatta tttccttgat gcaaatgggt
    21901 aaaaccagtg tatctttaaa acgtcattct gacgctggac tattatatat atcatattta
    21961 acacatccaa ctactggtgg tgtatctgca agttttgcat cagttggtga tataaattta
    22021 agtgagccaa aagcgttgat aggttttgca ggtcgtcgag ttatagagca gacaataaac
    22081 gaaaaattgc cagatgattt ccaaactgca gaatttttat tagagcatgg acaattggac
    22141 aaagttgtac atcgtaatga tatgcgtcaa acattgtctg aaattctaaa aatccatcaa
    22201 gaggtgacta aataatgtta gattttgaaa aaccactttt tgaaattcga aataaaattg
    22261 aatctttaaa agagtctcaa gataaaaatg atgtggattt acaagaagaa attgacatgc
    22321 ttgaagcatc attggaacga gaaactaaaa aaatatatac aaatttaaaa ccatgggatc
    22381 gtgtgcaaat tgcgcgtttg caagaaagac ctacgaccct agattatatt ccatatatct
    22441 ttgattcgtt tatggaacta catggtgatc gtaattttag agatgatcca gcaatgattg
    22501 gtggtattgg ctttttaaat ggtcgtgctg ttacggttat tggacaacaa cgtggaaaag
    22561 atacaaaaga taatatttat cggaattttg gtatggcgca tccagaaggt tatcgaaaag
    22621 cattacgttt aatgaaacaa gctgaaaaat tcaatcgtcc tatctttaca tttatagata
    22681 caaaaggtgc atatcctggt aaagctgctg aagaacgtgg acaaagtgaa tctatcgcaa
    22741 caaatttgat tgagatggct tcactaaaag taccagttat tgcgattgtc attggtgaag
    22801 gtggcagtgg aggtgcccta ggtattggta ttgccaataa agtattgatg ttagagaata
    22861 gtacttactc tgttatatct cctgaaggtg cagcggcatt attatggaaa gacagtaatt
    22921 tggctaaaat tgcagctgaa acaatgaaaa ttactgccca tgatattaag caattaggta
    22981 ttatagatga tgtcatttct gaaccacttg gcggtgcaca taaagatatt gaacagcaag
    23041 ctttagctat aaaatcagcg tttgttgaac agttagattc acttgagtca ttatcacgtg
    23101 atgaaattgc taatgatcgg tttgaaaaat tcagaaatat cggttcttat atagaataat
    23161 caacttgagc atttttatgt taaatcgata ctgggtttta ccataaattg aagtacatta
    23221 gaacaataat tttatattta gatactgaat tttaactaag attagtagtc aaaattgtgg
    23281 ctactaatct ttttttaatt aagttaaaat aaaattcaat atttaaaacg tttacatcaa
    23341 ttcaatacat tagttttgat ggaatgacat atcaatttgt ggtaatttag agttaaagat
    23401 aaatcagtta tagaaaggta tgtcgtcatg aagaaaattg cagttttaac tagtggtgga
    23461 gattcacctg gaatgaatgc tgccgtaaga gcagttgttc gtacagcaat ttacaatgaa
    23521 attgaagttt atggtgtgta tcatggttac caaggattgt taaatgatga tattcataaa
    23581 cttgaattag gatcagttgg ggatacgatt cagcgtggag gtacattctt gtattcagca
    23641 agatgtccag agtttaagga gcaagaagta cgtaaagttg caatcgaaaa tttacgtaaa
    23701 agagggattg agggccttgt agttattggt ggtgacggta gttatcgcgg tgcacaacgc
    23761 atcagtgagg aatgcaaaga aattcaaact atcggtattc ctggtacgat tgacaatgat
    23821 atcaatggta ctgattttac aattggattt gacacagcat taaatacgat tattggatta
    23881 gtcgacaaaa ttagagatac tgcgtcaagt cacgcacgaa catttatcat tgaggcaatg
    23941 ggccgtgatt gtggagatct agcattatgg gctggattat cagttggtgc tgagacaatt
    24001 gtagttccag aagtgaaaac agatattaaa gaaatagctg ataaaattga acaaggtatt
    24061 aaacgtggta agaaacactc aatcgttctt gtagcagaag gttgcatgac tgcgcaagat
    24121 tgtcaaaaag aattatcaca atacatcaat gttgataata gagtgtctgt gttaggtcac
    24181 gttcaacgtg gtggtagccc aacaggtgcg gatagagttt tagcatcacg tttaggtgga
    24241 tatgcggtag acttattaat gcaaggtgaa acagctaagg gtgttggaat taagaacaat
    24301 aaaattgtag caacatcttt tgatgaaatt tttgatggta aagatcataa atttgattat
    24361 agtctatatg aacttgctaa caagttatct atataagatt tcaggaggaa ttataaaatg
    24421 agaaaaacta aaattgtatg tacaattgga ccagcttcag aatcagaaga aatgattgag
    24481 aaattaatca atgctggtat gaacgttgca cgattaaact tttcacatgg tagtcatgaa
    24541 gagcataaag gtagaattga tacaattcgt aaagtagcta aaagattaga caaaattgta
    24601 gcaattttat tagatacgaa aggtccagaa attcgtacgc ataatatgaa agacggtatc
    24661 attgaacttg aacgtggtaa cgaagttatt gttagcatga atgaagttga aggaacacct
    24721 gaaaagttct cagtaacata tgaaaactta attaacgatg ttcaagtagg ttcatacatt
    24781 ttacttgatg atggcttaat tgaattacaa gttaaagata ttgatcatgc taaaaaagaa
    24841 gttaaatgtg atattttaaa ctctggtgag cttaaaaaca aaaaaggtgt taacttacct
    24901 ggtgtaagag taagtttacc tggtattaca gaaaaagatg ctgaagatat ccgtttcggt
    24961 attaaagaaa atgttgactt cattgcagca agtttcgtac gtcgtcctag tgatgtttta
    25021 gaaattcgtg aaattttaga agaacaaaaa gctaacattt cagtattccc taaaattgaa
    25081 aaccaagaag gtattgataa tattgcggaa attcttgaag tgtctgatgg tttaatggtt
    25141 gcacgtggtg acatgggtgt tgaaattcca cctgaaaaag taccaatggt tcaaaaagat
    25201 ttaatcagac aatgtaacaa attaggtaaa ccagttatta cagctacaca aatgttagat
    25261 tctatgcaac gtaacccacg tgctacacgt gcagaagcta gtgacgttgc caacgcaatc
    25321 tatgatggta cagatgcagt aatgttatct ggtgaaactg ctgctggttt atatcctgaa
    25381 gaagctgtta aaacaatgag aaatattgct gtatcagctg aagcagccca agattacaaa
    25441 aagttattgt cagatcgtac taaattagtt gaaacttcat tagtgaatgc tatcggtatt
    25501 tcggttgcac atacagcttt aaacttaaat gttaaagcaa ttgtagctgc tactgaaagt
    25561 ggttcaacgg cacgtactat ctctaaatat cgtccgcatt cagacattat tgcagtgact
    25621 ccaagtgaag aaactgcacg tcaatgttca attgtttggg gagttcaacc tgtagttaaa
    25681 aaaggacgta agagtacaga tgcattgtta aacaatgcag ttgcaacagc tgttgaaact
    25741 ggtagagtaa ctaatggtga tttaatcatt attactgctg gtgtaccaac tggtgaaact
    25801 ggaactacta atatgatgaa aattcaccta gttggtgacg aaattgctaa tggtcaaggt
    25861 attggacgtg gatcagttgt tggtactacg ttagttgctg aaactgttaa agatttagaa
    25921 ggtaaagatt tatctgacaa agttatcgtt actaactcaa tcgatgaaac gtttgtacct
    25981 tatgtagaaa aagctttagg cttaattaca gaagaaaatg gtattacatc accaagtgca
    26041 attgttggtt tagaaaaagg tattccaaca gttgtaggtg tagaaaaagc tgttaaaaac
    26101 ataagcaata acatgttagt tacgattgat gctgctcaag gtaaaatctt tgaaggatat
    26161 gcaaacgtac tataatttat aaaaaacgtc tttccattta tcaacaatgg aaaggcgttt
    26221 tttggttcat ctggtatttt atgacgtaat taataggtta tttgataatg atagtgtatg
    26281 aatggaaatc tatataaatg tttatatctt ttatacatgt acattatcac ctttaaacct
    26341 tcactcatat tactttggaa agttattata aaatagaagt atggatgtat ttctgaaatg
    26401 atacattatt aaatagatga gaaagtaaaa gcattgagcc aagtacgcaa tttaatatta
    26461 taagttgcat ataaaaaccc ctgttgaact ttaatatatt caacaggggt aaaacttgtt
    26521 gttatttatt tgatttagca gcgatacgtt tatatcttaa gtacataaat cctaatagta
    26581 taaaccaaat aggaataaaa taaattgcac gtcttgtatc aacattaata aataataacc
    26641 cgaacacaaa aatgaagaat acaaatatta agtagcccat atatttacca cctaatagtt
    26701 tgtacgtagc atttttatgt agatctgggt ttttacgact ataattgata tatgcaatga
    26761 taatcagacc ccatacaact aaaaataaca ctgtagagat ggtagtcaca tacgtaaata
    26821 cttttgtcgc atctgggaaa atatagttta gtaatgctgc cacaagtaat aatgctgatg
    26881 aagcaaagat tgcaacatgt ggaacgccat atttattcgt tttagtaaag ttcggaggtg
    26941 cttgttgttg acttgataaa ccaaaaagca tacggctatt tgagaatata ccactgttac
    27001 atgatgaagc agcagcggtt aatactacaa aattaatcaa gcccgcagca aacggaattc
    27061 cgatcaatgc gaataatttt acgaatggac tgttatcagg atcaacttgc tgccatggga
    27121 taatagacat gataaccgct aacgcaccaa cgtaaaatat taaaattcta atgggtacac
    27181 tgttaattgc ttttggaatt gttttaactg gatcttttgt ttccccagct gtaacaccaa
    27241 tcatttcaat tcctacaaat gagaataatg ccatttggaa agacataaag aatccagaag
    27301 cacctttagc gaatatgccg tgttcatata gatttgtgaa actggcatgc ccgaattgag
    27361 ttttaaatgc aaatagaatc atgacgaaac caactactat taaaccaata attgtcgcta
    27421 ttttaatgat agagaaccaa aattctaatt ctccgaaaag tcttgcgcta agtaggttga
    27481 atgacattaa taacagtaca caaaatagtg cacttatcca gtttggaatt tctgggaacc
    27541 aaaagctaac atattttgcc acagccgtta cttcagccat acctgtaata atccaacaga
    27601 accagtatgt ccatccggta acaaatcctg caaaaggccc aatatatgta ttggttacat
    27661 ctgcgaaaga tttaaattca gtattctgta taatgatttc tcctaaacct cgcataaaca
    27721 taaataacat aaatcctata atgatgtatg ttaatagaat tgaagggccg gttaatgcaa
    27781 tcgtttgacc agcacctaag aataagcctg taccaattgc accgccaatt gcaattaatt
    27841 gtatgtggcg attgctcagt tccctttgta atttttcagc cataatacat ctcccttaaa
    27901 tatagatatg tttattatgc acttatattg agatatatac aattattttc ggtaaaaatg
    27961 tgtaaaattc catgttaata tactttggtt tttataatca tatataataa ccaattgaaa
    28021 atttaattct attgtaaaat tcatggatta ttcacatctt gaaaaagctt taatggtgct
    28081 atttgtggct attctgtgac atttacatag atttacaaaa taattgttgc acatataatg
    28141 ccagttttta tatttcacaa acgaaatgcg tttagctata atattagttg aaagccattt
    28201 cataaagaaa cagtaaaggg gaaatttatc atggcagaat tacaaagagg tttagaaggg
    28261 gttatcgcag cggagactaa aataagttca attattgaaa gtcaattgac ttatgccggc
    28321 tatgatattg atgatctagc tgaaaatgcg caatttgagg aagttatttt cctattatgg
    28381 aactatagat tgccaaatga agaagagctt gctcatctaa aagggaaatt aaatcaatac
    28441 atgacattaa atcctcgtgt gtatacacat tttgaggagt atgttacaga tcacgtgcat
    28501 ccaatgacag cattacgtac gtcgttatca tatattgcac atttcgatcc agatgctgaa
    28561 aatgaatcag atgaaaatcg ttatgaaaga gcaatgcgta tacaggctaa agtagcatca
    28621 ttagttacag cgtttgctcg agtaagacaa gataaagaac cacttaagcc taatcctgac
    28681 ttaagttatg cggcaaactt cctatatatg ttacgtgggg aattaccaac agatatagaa
    28741 gtagaagcct tcaataaagc acttatttta cacgctgatc atgagttgaa cgcatctgca
    28801 tttacagcac gttgtgcggt atcatcattg tcagatatgt actcaggtat tgtagcagct
    28861 gtaggttctc tgaaagggcc attacatggt ggtgcaaacg aacaagttat gacgatgtta
    28921 tctgagattg ggtcaattga aaatgttgat gcttacttag atgaaaaatt tgctaataaa
    28981 gataaagtaa tgggcttcgg tcatcgtgta tataaagatg gtgatcctag agcgaaatat
    29041 ttaagagaaa tgagccgtca aattacgaaa gacgctggtc gtgaagaatt atttgaaatg
    29101 tcagtgaaaa tggaaaaacg tatggcagaa gaaaaaggat taattcctaa tgttgatttt
    29161 tatagtgcga gtgtttatca ctgtatggaa atacctcatg acttattcac gccaatcttt
    29221 gctgtaagtc gttctgcagg atggattgct catattttag aacaatataa agataataga
    29281 attatgcgtc ctagagcgaa atatattggc gaaacgaatc gtaagtatat cccgcttgaa
    29341 gaaagaaaat aatcaataca aattaaaaat gaagatgtaa aatttggagg taaaataact
    29401 atgactgcag aaaaaattac tcaaggaact gaaggattaa acgtacctaa cgaaccaatt
    29461 atcccattta ttatcggtga tggaattgga ccagatattt ggaaggcagc aagccgagtt
    29521 atagatgctg ctgttgagaa agcctataat ggcgaaaaac gcattgaatg gaaagaagtg
    29581 ctagctggcc aaaaagcatt tgatacaact ggtgaatggt tacctcaaga aacacttgat
    29641 acaattaaag aatatttaat tgctgttaaa ggacctttaa caacaccaat tggtggtggt
    29701 attagatcat taaatgtagc tttacgccaa gaattagatt tatttacttg tttaagaccg
    29761 gtacgttggt ttaaaggagt accatcacct gttaaacgtc cacaagatgt tgatatggtt
    29821 attttccgtg aaaatactga agacatttat gctggtattg aatttaaaga aggtacaaca
    29881 gaagttaaaa aggtaattga cttcttacaa aacgaaatgg gtgcgacaaa cattcgattc
    29941 ccagaaactt caggtattgg tattaaacca gtttctaaag aaggtactga gcgattagtt
    30001 agagcagcta ttcaatatgc tatcgataat aaccgtaaat cagttacttt agttcataaa
    30061 ggtaatatta tgaaatttac agaaggctca tttaagcagt ggggttacga tttagcatta
    30121 actgaatttg gtgatcaagt attcacttgg caacaatatg acgaaattgt tgaaaatgaa
    30181 ggcagagatg ctgctaatgc tgcacaagaa aaagctgaaa aagaaggcaa gattatcatt
    30241 aaagattcta ttgctgacat tttcttacaa caaattttaa ctcgtccagc tgagcatgat
    30301 gttgtagcaa ctatgaactt gaatggtgac tatatttcag atgctttagc tgcacaagtt
    30361 ggtggtattg gtattgcgcc aggtgcaaac attaattatg aaacaggtca tgctattttt
    30421 gaagcaacac atggtacagc tccaaaatat gcaggtttaa ataaagtgaa tccatcttca
    30481 gtaattttaa gttccgtatt aatgttagaa catttaggat ggcaagaagc ggcagataag
    30541 attacagatt caattgaaga tacaattgct tcaaaagttg ttacttatga ctttgcccgt
    30601 ttaatggatg gtgctgaaga agtttctaca tcagcatttg cagatgaatt gattaaaaat
    30661 ttaaaataag caaaataaac ttaggtgagt ctagcaactt taattgctag gttcgccttt
    30721 ttaaatgaat tgaagttggc aacaggacag aaataataaa gagtcactaa tgattgatta
    30781 tgtagtgttt cttacacatt aaccaaagcg aatgtgtaca taagcttagg aataaatgag
    30841 taaaactcat gcataggtag tgggatagaa atgatatttt cacaaattta tttcgttgtc
    30901 ccagagtaag acatgcaaat tatagaagga aatataagaa gtattttatt tatgtgtaaa
    30961 gtaatgtaaa aaatgtgtaa agataatgtg taggatgtta tttttataaa tagttcggtt
    31021 ataatgtaaa tataattata agttagggag gcataccatg tcgcaaaaag tgttggtagt
    31081 agatgacgaa cattcaatcg taacattact taaatataac ttagaaacag ctggttatga
    31141 agttgttgtc gcatttgatg gtgatgaggc tttagaaaag gtagaaaatg aacagccaga
    31201 tttaattatt ttagatgtta tgctacctaa aaaagatggc attgacgtat gtaagactgt
    31261 aagaacaaat aaaaatttag tccctatatt aatgttaacg gcgaaaaatg atgaatttga
    31321 tcgggtatta ggtttagaat taggtgccga tgactatatg actaagcctt tttcacctag
    31381 agaagttgtt gcccgtgtga aagccatttt aagacgttct caatttgtaa aagaagtaga
    31441 agagattgac gatgatatta ccatcggatc gatacgtatt agacccgatt attttgaagt
    31501 atataagcat aatgagttat tggagctaac accgaaagaa tttgaactct tgctttattt
    31561 gatagaaaga caaggcagag tcattacgag agagcatatg ttaaatacgg tatggaatta
    31621 tgaatttgca ggagactcaa gaattgttga tgtacatatc agtcatttaa gagataaatt
    31681 agaagataat cctaagaagc cacaacttat taaaactgtg cgtggcttag gctataaatt
    31741 ggaaagacct aaagaacaat gatgaagttt caccaccgct taatgttatt gataagcagt
    31801 atattaatta tcagttttgt tacattaggc attattattc acgcttccat cacatatgtt
    31861 ttatcagaaa aacacgaaca agctctagca acagatgcaa gatcatatat ttatttggtc
    31921 gaagataatg agattgataa agttaaagaa attgtaaaac agcaaaatat agatttattg
    31981 ataactaaaa atgataaaaa ggtgtttagt agtggcaaac tgaaagctac caaaaatagt
    32041 gatagctata ttcaaaaaaa ggacattttt atttttaata agaaggttaa cggttatcat
    32101 gtgtggatta aaggttacaa taatgatatt acagaaatgc attggacgtt gtggaaatat
    32161 cttatattga catgtttagt tgtacttatc tgtctgtatt ttgcaagccg tagttttaag
    32221 cgtacactaa tccgtcctat tcaagaagtt acttatgcaa cacaattgtt ggcaaatggt
    32281 tattatcaca tacgtgtacc tgaaagtaat gttgtagaaa ctaaagcgct ttttgtgtct
    32341 accaatgatt tagcacgacg ccttcaaaag cttaataatg agcaaaaaat tcaatccaac
    32401 cgtttaaaaa caacgattga aaatattcca agtgctattt taatgataga tcgaaatgga
    32461 aaaatcgttg ttgcaaataa agcgtattac gaacagttca acatctcgca taatattgaa
    32521 caagtaggct atcacggcta tgttaatact gaaattgagc aattaatttt agaaagtttt
    32581 aaagttgaaa aacctatcta tgaacaattg gaagttgcaa taaaccaagt ccatgctaag
    32641 tactttgaca tttcatgcgt tccaatttta actaggtctc aaaaaagttt gcaagggatt
    32701 ttagttgtga tgcatgacat tacaaatctg aaacaacttg aaaatttaag acgtgaattt
    32761 gtagcaaatg tttcacatga attaaaaaca cctattactt caattaaagg gtttgctgaa
    32821 acgcttattg atggtgcaaa aaatgatgcg gaatcattag acatgttttt gaacataatt
    32881 ttaaaagaat caaatcgaat agaatcttta gtaacagatc tgttagattt gtcgcatatt
    32941 gagcaacata ccgagttaga tacagactat atgaatttat cagatttaac gcggcgtatt
    33001 attgataata tgatgactca agccaatcaa aaaaatattt ccattcatac tgatattgaa
    33061 aaagatgtca ttgttaaagc acaagaaagt aaaattgctc aagttatcac gaatttgtta
    33121 acgaatgcaa ttaactattc ttatgaagat ggagatatta acgttcgtgt gtatcgagat
    33181 gactttcgtg tcattttcga agtacaagat tttggtatag gtattaaatt agaagaccaa
    33241 caacgtattt ttgaaagatt ttatagagta gataaagcac gaagtagaga ttctggtggg
    33301 acaggtcttg gattatcaat tacaaagcat atagtagagg cccaccaagg caatattgaa
    33361 gtgaatagtc aagttggcaa aggctcaacg ttcaaagtta ttctaaaaga ttataaagaa
    33421 taaaaattaa agtggtaaca gcgcgtgtat ttttcacgaa gttgttgctg cttttttatt
    33481 tcgttcaaat ctctattggt attaaattag agttaatgaa gtggaataaa ctcggttgtc
    33541 aattttgtca tttgcatatg tcgttttgta a
//
LOCUS       DALMNS010000021        33319 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.021, whole genome shotgun sequence.
ACCESSION   DALMNS010000021 DALMNS010000000
VERSION     DALMNS010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 33319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33319
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.021"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            292..1806
                     /gene="hutH"
                     /locus_tag="O6Y56_000786"
     CDS             292..1806
                     /gene="hutH"
                     /locus_tag="O6Y56_000786"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HDB5574070.1"
                     /translation="MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVER
                     IIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMIL
                     RLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEG
                     KVLYRGEEKDSDDVLRELNRQPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQS
                     EWIAALTHQSLNGIIDAYRHDVHAVRNFQEQINVAARMRDWLEGSTLTTRQAEIRVQD
                     AYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEANETFVISGGNFHGQPI
                     AFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLSPEPGLQSGAMIMQYAAASL
                     VSENKTLAHPASVDSITSSANQEDHVSMGTTAARHGYQIIENTRRVLAIECVIALQAA
                     ELKGVEGLSPKTRRKYDEFRSIVPSITHDRQFHKDIEAVAQYLKQSIYQTTACH"
     misc_binding    1879..2094
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            2184..3470
                     /gene="serS"
                     /locus_tag="O6Y56_000787"
     CDS             2184..3470
                     /gene="serS"
                     /locus_tag="O6Y56_000787"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDB5574071.1"
                     /translation="MLDIRLFRNEPDTVKSKIELRGDDPKVVDEILELDEQRRKLISA
                     TEEMKARRNKVSEEIALKKRNKENADDVIAEMRTLGDDIKEKDSQLNEIDNKMTGILC
                     RIPNLISDDVPQGESDEDNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAAKVSG
                     ARFVYLTNEGAQLERALMNYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDL
                     FKVEKEGLYTIPTAEVPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLI
                     RLHQFDKVEMVRFEQPEDSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKT
                     YDLEVWLPSYNDYKEISSCSNCTDFQARRANIRFKRDKAAKPELAHTLNGSGLAVGRT
                     FAAIVENYQNEDGTVTIPEALVPFMGGKTQISKPVK"
     gene            4117..4812
                     /locus_tag="O6Y56_000788"
     CDS             4117..4812
                     /locus_tag="O6Y56_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HDB5574072.1"
                     /translation="MTTHLSFRQGVQECIPTLLGYAGVGISFGIVASSQNFSILEIIL
                     LCLVIYAGAAQFIMCALFIAGTPISAIVLTVFIVNSRMFLLSMSLAPNFKTYGFWNRV
                     GLGSLVTDETFGVAITPYLKGEAINDRWMHGLNITAYLFWAISCVAGALFGEYISNPQ
                     TLGLDFAITAMFIFLAIAQFESITKSRLRIYIVLIIAVIVMMLSLSMFMPSYLAILIA
                     ATISAALGVMMER"
     gene            4809..5138
                     /locus_tag="O6Y56_000789"
     CDS             4809..5138
                     /locus_tag="O6Y56_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HDB5574073.1"
                     /translation="MITHMNMLILILLCGIVTLLIRIIPFIMISKVQLPDVVVRWLSF
                     IPITLFTALVIDSIIQQTPHGEGYTLNIPYIIALIPTVILSLITRSLTITIISGIVIM
                     AALRFFF"
     regulatory      5343..5441
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            5501..6469
                     /locus_tag="O6Y56_000790"
     CDS             5501..6469
                     /locus_tag="O6Y56_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDB5574074.1"
                     /translation="MTNYTVDTLNLGKFITESGEVIDNLRLRYEHVGYHGQPLVVVCH
                     ALTDNHLTYGTDDYPGWWREIIDGGYIPIHDYQFLTFDVIGSPFGSSSPLNDPHFPKK
                     LTLRDIVRANERGIQALGYDKINILIGGSLGGMQAMELLYNQQFEVDKAIILAATSRT
                     SSYSRAFNEIARQAIHLGGKEGLSIARQLGFLTYRSSKSYDERFTPDEVVAYQQHQGN
                     KFKEHFDLNCYLTLLDVLDSHNIDRGRTDVTHVFKNLETKVLTMGFIDDLLYPDDQVR
                     TLGERFKYHRHFFVPDNVGHDGFLLNFNTWAPNLYHFLNLKHFKRK"
     gene            6762..7700
                     /locus_tag="O6Y56_000791"
     CDS             6762..7700
                     /locus_tag="O6Y56_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YybS family protein"
                     /protein_id="HDB5574075.1"
                     /translation="MGVAYVFSKIQPKATIIATIALVFVALALYLVPGLGLIFALFAT
                     IPGIVLWNKSIQSFGISALITVIITTVLGNTFVLSAIILVLIASLIIGQLLKEKTSKE
                     RILYVTTVAMSLISLIAFMLLQTFVRIPPSASIVKPFKQTLHEAITMSGADANMTQIL
                     EEGFRQATVQLPGFIIIITFLIVLINLIVTFPILRKFKIATPVFKPLFAWQMSGILLW
                     IYIIVIICLLFTGQPSVFQSILLNFQLVLSLVMYIQGLSVIHFFGKAKGLPNAVTILL
                     LIIGTILTPTTHIVGLLGVIDLSLNLKRIMKNNSKK"
     gene            7715..9682
                     /gene="gdpP"
                     /locus_tag="O6Y56_000792"
     CDS             7715..9682
                     /gene="gdpP"
                     /locus_tag="O6Y56_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-di-AMP phosphodiesterase GdpP"
                     /protein_id="HDB5574076.1"
                     /translation="MNRQSTKKALLIPFVIMIITAIVLMGVWFIFNSLIALIASIVLV
                     VMIIVSIVLFRQALMKMDSYVDGLSAQISTTNNKAIKHLPIGIIVLDENDHIEWVNQF
                     MTDHMEANVISESVNEVFPNILKQLDRVKSVEIEYNQYHFQVRYSENDHCLYFFDITE
                     QVQTNELYENSKPIIATLFLDNYDEITQNMNDTQRSEINSMVTRVISRWATEYNIFFK
                     RYSSDQFVAYLNQKILADLEESKFDILSQLREKSVGYRAQLTLSIGVGEGTENLIDLG
                     ELSQSGLDLALGRGGDQVAIKSINGNVRFYGGKTDPMEKRTRVRARVISHALKDILAE
                     GDKVIIMGHKRPDLDAIGAAIGVSRFAMMNNLEAYIVLNETDIDPTLRRVMNEIDKKP
                     ELRERFITSDDAWDMMTSKTTVVIVDTHKPELVLDENVLNKANRKVVIDHHRRGESFI
                     SNPLLVYMEPYASSTAELVTELLEYQPTEQRLTRLESTVMYAGIIVDTRNFTLRTGSR
                     TFDAASYLRAHGADTILTQHFLKDDVDTYINRSELIRTVKVEDNGIAIAHGSEDKIYH
                     PVTVAQAADELLSLEGIEASYVVARREDNLIGISARSLGSVNVQLTMEALGGGGHLTN
                     AATQLKGVTVEEAIAQLQQAITEQLSRSEDA"
     gene            9679..10125
                     /gene="rplI"
                     /locus_tag="O6Y56_000793"
     CDS             9679..10125
                     /gene="rplI"
                     /locus_tag="O6Y56_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDB5574077.1"
                     /translation="MKVIFTQDVKGKGKKGEVKEVPVGYANNFLLKKNYAVEATPGNL
                     KQLELQKKRAKQERQQEIEDAKALKETLSNIEVEVSAKTGEGGKLFGSVSTKQIAEAL
                     KAQHDIKIDKRKMDLPNGIHSLGYTNVPVKLDKEVEGTIRVHTVEQ"
     gene            10157..11557
                     /gene="dnaB"
                     /locus_tag="O6Y56_000794"
     CDS             10157..11557
                     /gene="dnaB"
                     /locus_tag="O6Y56_000794"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDB5574078.1"
                     /translation="MDRMYEQNQMPHNNEAEQSVLGSIIIDPELINTTQEVLLPESFY
                     RGAHQHIFRAMMHLNEDNKEIDVVTLMDQLSTEGTLNEAGGPQYLAELSTNVPTTRNV
                     QYYTDIVSKHALKRRLIQTADSIANDGYNDELELDAILSDAERRILELSSSRESDGFK
                     DIRDVLGQVYETAEELDQNSGQTPGIPTGYRDLDQMTAGFNRNDLIILAARPSVGKTA
                     FALNIAQKVATHEDMYTVGIFSLEMGADQLATRMICSSGNVDSNRLRTGTMTEEDWSR
                     FTIAVGKLSRTKIFIDDTPGIRINDLRSKCRRLKQEHGLDMIVIDYLQLIQGSGSRAS
                     DNRQQEVSEISRTLKALARELECPVIALSQLSRGVEQRQDKRPMMSDIRESGSIEQDA
                     DIVAFLYRDDYYNRGGDEDDDDDGGFEPQTNDENGEIEIIIAKQRNGPTGTVKLHFMK
                     QYNKFTDIDYAHADMM"
     gene            11836..13119
                     /locus_tag="O6Y56_000795"
     CDS             11836..13119
                     /locus_tag="O6Y56_000795"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDB5574079.1"
                     /translation="MSSIVVVGTQWGDEGKGKITDFLAEQSDVIARFSGGNNAGHTIQ
                     FGGETYKLHLVPSGIFYKDKLAVIGNGVVVDPVALLKELDGLNERGIPTSNLRISNRA
                     QVILPYHLAQDEYEERLRGDNKIGTTKKGIGPAYVDKVQRIGIRMADLLEKETFERLL
                     KSNIEYKQAYFKGMFNETCPSFDDIFEEYYAAGQRLKEFVTDTSKILDDAFVADEKVL
                     FEGAQGVMLDIDHGTYPFVTSSNPIAGNVTVGTGVGPTFVSKVIGVCKAYTSRVGDGP
                     FPTELFDEDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVL
                     TGLDTVKICTAYELDGKEITEYPANLDQLKRCKPIFEELPGWTEDVTSVRTLEELPEN
                     ARKYLERISELCNVQISIFSVGPDREQTNLLKELW"
     gene            13549..13623
                     /locus_tag="O6Y56_000796"
     tRNA            13549..13623
                     /locus_tag="O6Y56_000796"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13582..13584,aa:Glu,seq:ttc)
     gene            13631..13703
                     /locus_tag="O6Y56_000797"
     tRNA            13631..13703
                     /locus_tag="O6Y56_000797"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13664..13666,aa:Asp,seq:gtc)
     gene            14316..15017
                     /locus_tag="O6Y56_000798"
     CDS             14316..15017
                     /locus_tag="O6Y56_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDB5574080.1"
                     /translation="MARKVVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIYE
                     EEPDIVLLDIMLPGRDGMEVCREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTK
                     PFSTRELIARVKANLRRHYSQPAQDTGNVTNEITIKDIVIYPDAYSIKKRGEDIELTH
                     REFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEY
                     IVTRRGVGYFLQQHE"
     gene            15030..16856
                     /gene="walK"
                     /locus_tag="O6Y56_000799"
     CDS             15030..16856
                     /gene="walK"
                     /locus_tag="O6Y56_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall metabolism sensor histidine kinase
                     WalK"
                     /protein_id="HDB5574081.1"
                     /translation="MKWLKQLQSLHTKLVIVYVLLIIIGMQIIGLYFTNNLEKELLDN
                     FKKNITQYAKQLEISIEKVYDEKGSVNAQKDIQNLLSEYANRQEIGEIRFIDKDQIII
                     ATTKQSNRSLINQKANDSSVQKALSLGQSNDHLILKDYGGGKDRVWVYNIPVKVDKKV
                     IGNIYIESKINDVYNQLNNINQIFIVGTAISLLITVILGFFIARTITKPITDMRNQTV
                     EMSRGNYTQRVKIYGNDEIGELALAFNNLSKRVQEAQANTESEKRRLDSVITHMSDGI
                     IATDRRGRIRIVNDMALKMLGMAKEDIIGYYMLSVLSLEDEFKLEEIQENNDSFLLDL
                     NEEEGLIARVNFSTIVQETGFVTGYIAVLHDVTEQQQVERERREFVANVSHELRTPLT
                     SMNSYIEALEEGAWKDEELAPQFLSVTREETERMIRLVNDLLQLSKMDNESDQINKEI
                     IDFNMFINKIINRHEMSAKDTTFIRDIPKKTIFTEFDPDKMTQVFDNVITNAMKYSRG
                     DKRVEFHVKQNPLYNRMTIRIKDNGIGIPINKVDKIFDRFYRVDKARTRKMGGTGLGL
                     AISKEIVEAHNGRIWANSVEGQGTSIFITLPCEVIEDGDWDE"
     gene            16849..18183
                     /locus_tag="O6Y56_000800"
     CDS             16849..18183
                     /locus_tag="O6Y56_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001060131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574082.1"
                     /translation="MNNKEHIKSVILALLVLMSVVLTYMVWNFSPDIANVDNTDSKKS
                     ETKPLTTPMTAKMDTTITPFQIIHSKNDHPEGTIATVSNVNKLTKPLKNKEVKSVEHV
                     RRDHNLMIPDLSSDFTLFDFTYDLPLSTYLGQVLNMNAKVPNHFNFNRLVIDHDADDN
                     IVLYAISKDRHDYVKLTTTTKNDYFLDALAAVKKDMQPYTDIITNKDTIDRTTHVFAP
                     SKPEKLKTYRMVFNTISVEKMNAILFDDSTIVRSSKSGVTTYNNNTGVANYNDKNEKY
                     HYKNLSEDEASSSKMEETIPGTFDFINGHGGFLNEDFRLFSTNNQSGELTYQRFLNGY
                     PTFNKEGSNQIQVTWGEKGVFDYRRSLLRTDVVLNSEDNKTLPKLESVRSSLANNSDI
                     NFEKVTNIAIGYEMQDNSDHNHIEVQINSELVPRWYVEYDGEWYVYNDGRLE"
     gene            18184..18972
                     /locus_tag="O6Y56_000801"
     CDS             18184..18972
                     /locus_tag="O6Y56_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system regulatory protein YycI"
                     /protein_id="HDB5574083.1"
                     /translation="MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVN
                     FQQEEIKVPASILNKSVKGIKLEQITGRSKDFSSKAKGDSDLTAADGGKLLNANISQS
                     VKVSDNNLKDLKDYVNKRVFKGSEYQLSEISSGSVKYEQTYDNFPILNNSKAMLNFNI
                     EDNKAASYKQSMMDDIKPTDGADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYY
                     SVVNETNVQLLQPNWEIKVKHDGKDKTNTYYVEATNNNPKIINH"
     gene            19360..20160
                     /locus_tag="O6Y56_000802"
     CDS             19360..20160
                     /locus_tag="O6Y56_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDB5574084.1"
                     /translation="MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFS
                     QIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPIYANEKTWQAIEKKDSRIPMDQK
                     FIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
                     GSDAFIFESNHDVDMLRICRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYL
                     SHLSQDNNMKDLARMSVGQVLNEHDIDTEKEVLLCDTDKAIPTPIYTI"
     gene            20387..22693
                     /gene="adsA"
                     /locus_tag="O6Y56_000803"
     CDS             20387..22693
                     /gene="adsA"
                     /locus_tag="O6Y56_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG-anchored adenosine synthase AdsA"
                     /protein_id="HDB5574085.1"
                     /translation="MKALLLKTSVWLVLLFSVMGLWHVSNAAEQHTPMKAHAVTTIDK
                     AITDKQQVTPTKEAAHHYGEEAATNVSASAQGTADDTNNKVTSNAPSTAASTTVNETR
                     DVDTQQASTQKPTRTATFKLSNAETASLSPRMFATNAPQTTTHKILHTNDIHGRLAEE
                     KGRVIGMAKLKTVKEQEKPDLMLDAGDAFQGLPLSNQSKGEEMAKAMNAVGYDAMAVG
                     NHEFDFGYDQLKKLEGMLDFPMLSTNVYKDGKRAFKPSTIVTKNGIRYGIIGVTTPET
                     KTKTRPEGIKGVEFRDPLQSVTAEMMRIYKDVDTFVVISHLGIDPSTQETWRGDYLVK
                     QLSQNPQLKKRITVIDGHSHTVLQNGQIYNNDALAQTGTALANIGKITFNYRNGAVSN
                     IKPSLINVKDVENVTPNKALAEQINQADQTFRAQTAEVIIPNNTIDFKGERDDVRTRE
                     TNLGNAIADAMEAYGVKNFSKKTDFAVTNGGGIRASIAKGKVTRYDLISVLPFGNTIA
                     QIDVKGSDVWTAFEHSLGAPTTQKDGKTVLTANGGLLHISDSIRVYYDMNKPSGKRIN
                     AIQILNKEIGKFENIDLKRVYHVTMNDFTASGGDGYSMFGGPREEGISLDQVLASYLK
                     TANLAKYDTTEPQRMLLGKPAVSEQPAKGQQGSKGSESGKDTQPIDKDKVMNPAKQPA
                     SGKVVLLPAHRGTVSSGREGSDRALEGNAVSSKSGKQLASMSAPKDSAHEKQLPKTGT
                     NQSSNPATMFVLVAGIGLIATVRRRKAS"
     gene            23061..23540
                     /gene="rlmH"
                     /locus_tag="O6Y56_000804"
     CDS             23061..23540
                     /gene="rlmH"
                     /locus_tag="O6Y56_000804"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020363758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDB5574086.1"
                     /translation="MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAP
                     ENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSD
                     FVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAYHK"
     gene            23593..24879
                     /locus_tag="O6Y56_000805"
     CDS             23593..24879
                     /locus_tag="O6Y56_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HDB5574087.1"
                     /translation="MGIYHLNKDKDVLTDLKSNEKQEQVATFINKHLSANNLTIFIGS
                     GCSTGAVPLMSTTMKNILEENESVLNYVKKFLNSKGIKEFIKYVEEQEQEKIQEKERK
                     ALHTIMDQLEAENFKNLEEYSGWLDMQDSEYKEEILNFLDCYYLNYSNIEELLNWIQN
                     GLHYDNNNGDLKDVFTTLKSEFIKTIPKVGDKEYSTETYEIYKDFYRYVFDKRTEQKS
                     KVSIFTTNYDLFNEYALENNNIIYSTGIQNTILKKFDINQFKYRVVDDTNRYKEKWQP
                     VSKEANLYKIHGSINWKSNEEGELQQIDFNDEDDQVVIYPTMLKHKETAQAPYSELFR
                     EFSNCLQIKDTTLIIIGYGFPDEHINNIIAQNLKNQDFNLIIFGDVKEENVKNFYDNF
                     KNFNLHLIGGNSSKAEQKAHYFQFIVENFLKNQRRR"
     gene            24885..26573
                     /locus_tag="O6Y56_000806"
     CDS             24885..26573
                     /locus_tag="O6Y56_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000555614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDB5574088.1"
                     /translation="MHSIGKVTSVTFEKLIFEVSDFEKLNYNLLGQIYIAKGVIDYVT
                     IKNEYSEKFIYQVVKVEDKEIPLSSEEHSKFKYHGRFECVPVGMIKHGKIEFNLKKYP
                     FLQDKVYLTSQEEMEMVFSHFHNGNDITIGLIDDQYPAYFNTAKLLTNHTAIIGNTGS
                     GKSTTVRQIISKINNLNTQNLHFHIFDVHDEYKDINGVKIVDVINDFKINIKNLEMQD
                     WINLIKPSELVQLPILQMGLKYANAIENKIIEEEWLKCYIALSLYRNQQTDAVTKRTK
                     ILSILDGTNIDTEKYDSKYGNMDSNTEKKFIESLKNVVDNGGNIFTLSEVIEKAKYNV
                     SSFNKLLEGLNYVFLLEESKGNNQARSYSATLETRIKNVQTRFSNLFGNNDTELEDKS
                     IVYSVSELDDDLLLFFTTFILKKEFEKNKKMKLEDRSVNVFIFEEAHRYISKFKESSQ
                     FNEVEAFKKIAREGRKFGCFLMLSSQRPSELSSTVLSQCNNYIVHRVKNNVDLEYLLN
                     SIPYINKFQLNRFSYLPTGTAYIVGELFPIPVEIEIFEEFSKNSTITPEIVYRS"
     gene            26734..26871
                     /locus_tag="O6Y56_000807"
     CDS             26734..26871
                     /locus_tag="O6Y56_000807"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574089.1"
                     /translation="MAKLIHLLSILYRLSSDKKFTVKQISDTCHNGGKSLYSAITNLK
                     K"
     gene            27134..27745
                     /locus_tag="O6Y56_000808"
     CDS             27134..27745
                     /locus_tag="O6Y56_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000856594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574090.1"
                     /translation="MKTPIYYTIVNKGNNIENTIFQTPPNTVSDFDHLDVMRYLPSIV
                     DISEICLLAEAKKIPEFKKSLDFILNKFETYTFNIVNDLIEITLTKDALLNYQKYLLH
                     QSIIISKSLALKNSNNGLCTQELKSQLYGYEKLHYEPAFHILDNDLIPNINEEQSELI
                     PLEHVVLLSDGISYLMDYFDKNPEATFTLYIVKDYTSYYEVEL"
     gene            complement(28084..28491)
                     /locus_tag="O6Y56_000809"
     CDS             complement(28084..28491)
                     /locus_tag="O6Y56_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000173401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDB5574091.1"
                     /translation="MTLLEYSNIGNTPFEKLLGHNKNLLKYWNNLSDFLSSDGAISKE
                     LKEELRRLLAQQNGCQYCKAKGSPTNKFLNEKSLLCVGFVEVYLKSKQNIPESSISLL
                     KETMTDEEIIELITFVLFTTAQQHLGAILRLSE"
     gene            28592..29005
                     /locus_tag="O6Y56_000810"
     CDS             28592..29005
                     /locus_tag="O6Y56_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002479187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HDB5574092.1"
                     /translation="MNDLINEKIINVLLNNSRITINELSKQVNLSAPAVRERVNKLED
                     QGIIKGYTINIDYKELGYDVEILIELTIKNNRYKDFKEFISKQDNVEFCYRVSGEACF
                     VFKVRLENMDEVETFVDTIQPYGQTKCQFIFSSVV"
     gene            29067..29540
                     /locus_tag="O6Y56_000811"
     CDS             29067..29540
                     /locus_tag="O6Y56_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000455984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5574093.1"
                     /translation="MEYKSYNKMSNNILSILLSEKNFDNKMVVSTGSYILSELPCIVA
                     YKNNDIVGLLTYKVYDEYIEIISLDSFVENKGIGSHLLNYAEIIASDMSKRSIRVITT
                     NENIKALYFYQKNKYRITDVIFDAVTEARKIKPSIPAIDKNGIEIRDEIVLRKCL"
     gene            complement(29648..30634)
                     /locus_tag="O6Y56_000812"
     CDS             complement(29648..30634)
                     /locus_tag="O6Y56_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000662030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HDB5574094.1"
                     /translation="MKENFWSELPRPFFILAPMEDVTDIVFRHVVSEAARPDVFFTEF
                     TNTESFCHPEGIHSVRGRLTFSEDEQPMVAHIWGDKPEQFRETSIQLAKMGFKGIDLN
                     MGCPVANVAKKGKGSGLILRPDVAAEIIQATKAGGLPVSVKTRLGYYEIDEWKDWLKH
                     VFEQDIANLSIHLRTRKEMSKVDAHWELIEAIKNLRDEIAPNTLLTINGDIPDRKTGL
                     ELAEKYGIDGVMIGRGIFHNPFAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQF
                     KSLRRFFKIYVRGIRGASELRHQLMNTQSIAEARALLDEFEAQMDEDVKIEL"
     gene            30942..31145
                     /locus_tag="O6Y56_000813"
     CDS             30942..31145
                     /locus_tag="O6Y56_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574095.1"
                     /translation="MEDLKESLKSLGWWDLFFAIPMFLLFAYLPNYNFITIFLNIVII
                     IFFSIGLILTTHIIIDKIKSNTK"
     gene            31194..31490
                     /locus_tag="O6Y56_000814"
     CDS             31194..31490
                     /locus_tag="O6Y56_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000179889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HDB5574096.1"
                     /translation="MATEKDVNDLFLNHVNSNAVKTRKMMGEYIVYYDGVVIGGLYDN
                     RLLVKATKSARHQFQDNTLVSPYPGAKEMILIPDITEVTNLTDLFELIKNDLQK"
     gene            complement(31552..32772)
                     /locus_tag="O6Y56_000815"
     CDS             complement(31552..32772)
                     /locus_tag="O6Y56_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5574097.1"
                     /translation="MTDLLKIKNFRLFFLAEIISAFGVGISTVGANWYLIDKTNDSQL
                     LGIMLALNVLSGFLASPIIGGLADKYNRRNIILITYLLQVILYLLIVIALLMIGFETY
                     LVIGFAIVNGIGWTTYMATSRSLVKQILKPDQYTDANSLLEISLQTGMFIAGGLSGIL
                     YEINGFTLIIAMTIMMFLISIFMLFRLHVDKPTHSEEESTNSLLQEYLLGWKFLKDNM
                     MIFIFGVISIIPMVFTMIFNISLPGYVYNVLKLSSVQFGFSDMLYGIGGLCAGLISAI
                     LSKKISTKALIFLLYFILVINSALFIWINSAFYLFIGSFILGYSISSIRIYMNTAIMN
                     TVSDKYVGRSFTIWTSISLLLQSFIAPFLGRWINEINDKFGFYIILILSLLIFVTLLL
                     VNKTDKIKYAHKEE"
     gene            complement(32765..33316)
                     /locus_tag="O6Y56_000816"
     CDS             complement(32765..33316)
                     /locus_tag="O6Y56_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HDB5574098.1"
                     /translation="MITCLFGSSRKDGNSAIAVENLLKNLNVNFVNLYQSNIEKVTDN
                     RHSKDANFHNDDYEQILIKVLESDIIIFSTPLYWYSMSASLKLFIDRWTESLRDTQID
                     NFKEIMSQKKYLILIIGGDNPHTKAQPLVNQFKLIFEFMNITNYRFLIGEGNKPFDIL
                     NDSQFIEELANINLALKKGDIYD"
BASE COUNT        12068 a         4843 c         6160 g        10248 t
ORIGIN      
        1 aatttattca attttaaaaa tatatagtaa cttttaacaa aatgtattat aaatttctga
       61 attcattatt atttgtcgtt aaatacaata gaaaatacta tacctgtata tgcaattcgt
      121 caatagataa attattaaat atgcttacaa caatcttaat atcctttaac gcactacaat
      181 agtgctctga taataggtta taaatgtacg taaaagcatt gtttcaataa aaatgaaaac
      241 gtatacttca agaaggatgg gttacttaat ataaacaagg gggtaacata tatgacttta
      301 tatttagatg gtgaaacact aactattgag gatattaaat catttttaca acaacaatca
      361 aagattgaaa ttattgatga tgcgttagaa cgtgtcaaaa aaagtagagc ggtagttgaa
      421 cgtattattg aaaatgagga aacggtttat ggtatcacta caggttttgg gttatttagt
      481 gatgtacgta tagacccgac gcaatataat gaattacaag tgaatctgat acgctcacat
      541 gcctgtgggc taggtgagcc attttcaaaa gaagtagcat tagtcatgat gattttacga
      601 ttgaatacat tattaaaagg tcattcaggt gccactttag aattagtgag acaattacaa
      661 ttttttataa atgaacgtat tataccgata atcccacaac aaggctctct cggtgcatca
      721 ggagatttag caccattatc acacttagca ttagcattaa ttggtgaagg gaaagtattg
      781 tacagaggag aagaaaagga tagtgacgat gtattaagag aattaaatag acaacctttg
      841 aaccttcagg ctaaagaagg tttagcattg attaatggta cgcaagctat gacagctcaa
      901 ggtgtcatta gttatataga agcagaagat ttaggttacc aatctgaatg gattgctgca
      961 ttaacgcatc agtctcttaa tggcattata gatgcatatc gacatgatgt gcacgctgtt
     1021 cgtaattttc aagaacagat taatgtggca gcgcgtatgc gtgattggtt agaaggatca
     1081 acattaacga cgcgacaagc agaaatacgt gtacaagatg catatacgtt gcgttgtata
     1141 ccacaaatcc atggcgcgag ttttcaagta ttcaattatg ttaaacagca attagaattt
     1201 gaaatgaatg cggctaatga taatccactt atatttgagg aagcaaatga aacgtttgtt
     1261 atttcaggtg gtaacttcca tggacaacct attgcttttg cattagatca tcttaaatta
     1321 ggtgtaagtg aattagcaaa cgtatcggaa cgtcgtctag agcgactagt aaatcctcaa
     1381 ttaaatggtg atttaccagc atttcttagt ccagagccag gattgcaaag tggcgcgatg
     1441 attatgcaat atgctgctgc aagtctcgtt tctgaaaata aaactttagc gcatccagcg
     1501 agtgttgatt ctatcacttc atctgcgaac caagaagatc acgtatctat gggaactaca
     1561 gctgctagac atggttatca aattattgaa aatacaagac gtgtgttggc aatcgaatgt
     1621 gttattgcat tacaagcagc agagttgaaa ggtgttgaag gattatcacc aaaaacacgt
     1681 cgcaagtatg atgagtttcg aagtatcgtg ccatccatta cacatgaccg tcaatttcat
     1741 aaagatattg aagcggttgc acagtattta aagcaatcaa tttatcaaac gactgcatgt
     1801 cactaaatcg acatgagtga tgtttgaaat cgttacttga aaaagcaaat atagtttgct
     1861 atattaaaaa taacttaata agacattgtt cgtaggacaa gtaatatata gtgttcgata
     1921 tcagagagct tgtggttagt gtgaacaaga atcaacatat atatgaatct acctacttat
     1981 ttaaaagaac aatcggtgat aaccgttatt ttagtgaagt gcaatttagg tttagcatat
     2041 ctttataact taaattgtta aatagggtgg caacgcgtag accacgtccc ttgtagggat
     2101 gtggtctttt tttattttct aaaaaataaa gacgtatgtc attccataat aaatgataat
     2161 tatttgggaa aggatgaagg ttaatgttag acattagatt attcagaaat gagcctgaca
     2221 cagttaagag caaaattgaa ttacgcggag atgatccaaa agttgtagat gaaattttag
     2281 aattggatga gcaacgacgt aaattaatta gtgcaacaga agaaatgaaa gcacgtcgta
     2341 ataaagtaag cgaagaaatc gcattaaaaa aacgtaataa agaaaatgct gatgatgtga
     2401 ttgctgaaat gcgcacatta ggtgacgata ttaaagaaaa agatagtcaa ttaaatgaaa
     2461 ttgataataa aatgacaggt atcctttgtc gtattccaaa tttaataagt gatgatgtac
     2521 ctcaaggtga atctgatgaa gataacgttg aagttaaaaa gtggggtaca ccacgtgagt
     2581 tttcatttga accaaaagca cattgggata ttgtagaaga attgaaaatg gctgattttg
     2641 atcgtgcagc aaaagtttca ggtgcgcgtt ttgtatattt aacaaatgaa ggtgcgcaat
     2701 tagagcgtgc tttaatgaac tatatgatta caaaacatac aacacaacat ggttatacag
     2761 aaatgatggt accacagctt gtgaacgcag atacaatgta tggtacaggt caattaccta
     2821 aatttgaaga agatttattt aaagtagaaa aagaaggatt atatacaatt ccaactgctg
     2881 aagtaccatt aacgaatttc tatcgtaatg aaattattca accaggtgta cttcctgaaa
     2941 aattcactgg tcaatctgca tgtttccgta gtgaagcagg atcagcaggt agagatacaa
     3001 gaggattaat tcgtttacat caattcgata aagtggaaat ggtacgtttt gaacaacctg
     3061 aagattcatg gaatgcttta gaagaaatga caacaaacgc agaagcaatt ctagaagagt
     3121 taggtttacc ataccgtcgt gttattttat gtacaggtga tattggattt agtgcaagca
     3181 aaacatatga tttagaagtt tggttaccaa gctacaatga ttataaagaa attagttcat
     3241 gctcaaactg tacggatttc caagcgcgtc gtgctaacat ccgcttcaag cgtgacaaag
     3301 cagctaaacc agaattagca catacattaa atggtagtgg tttagcagtt ggacgtacat
     3361 ttgctgctat tgttgaaaat taccaaaatg aagatggaac agtaacaatt ccagaagcat
     3421 tagtaccatt tatgggtggt aaaacacaaa tttcaaaacc agttaaataa aggctttagc
     3481 tacaagcttt aaaaagtata tatctacgta tacttaaagc aagggcaaga tactttaaat
     3541 aatattttaa aaagtggtga cgaagctgtc gccacttttt ttgtgctgta aaagtataat
     3601 agtgagccaa tacacataac aacaataaat taagtttgtg gttcaatggg gtgaacgcat
     3661 ttcattatag caacaatacg ggataattat gatgaactaa aacaatctaa agcgtaacaa
     3721 aattgagcaa aaatattata ggaaattaag cgataaataa ctgatttcgt tgatgtagta
     3781 tgagtaatat cgatgcagta gggtaggggg gatgatgatt ataagggatc gggacatgaa
     3841 tcaatatccc agactcatca ttagatataa aaaattataa aattagtact taaaaacaac
     3901 tacaaatccg tagaaaatat agaggtagtc ttaaataaaa aattgaaaat tctcaaaact
     3961 aaaaagttga gacggaagta tttcaagaca tcggtatgtc taacctcaga caaaccgatg
     4021 tctaatgttg ttgcttaggg tatagaactg tattagacta ggtatattat tttttcgtaa
     4081 ttatataaat ataaagtggc aaaggaggta gttgagatga caacacattt aagttttaga
     4141 caaggcgtgc aagagtgtat ccctacatta ttaggttatg ccggtgttgg tatttcattt
     4201 ggtattgtgg cttcgtctca aaactttagt attttagaaa ttatcttgtt atgtcttgtt
     4261 atatatgccg gtgctgcgca atttattatg tgcgcattgt ttatagcagg tacaccgata
     4321 tcagcgattg tactaactgt atttatcgta aattcaagaa tgttcctttt aagtatgtcg
     4381 cttgcaccaa acttcaagac atatgggttt tggaaccgtg ttggattagg ttcattagta
     4441 actgacgaaa cgtttggtgt cgccattaca ccttatttaa aaggagaagc tatcaatgat
     4501 cgctggatgc atggtcttaa tattacagca tatttatttt gggcaatttc atgtgtagct
     4561 ggggctttat ttggcgaata tatctcaaat ccgcaaacgt taggattaga ctttgctatc
     4621 acagctatgt ttatcttttt ggccattgcg caatttgaat caattactaa atcgcgatta
     4681 agaatttaca tagtactcat tattgccgtc atagtaatga tgttatcgct aagtatgttt
     4741 atgccttcat atctagcaat attaattgca gccacaattt cagcagcgtt aggagtgatg
     4801 atggaacgat gataactcat atgaacatgt taatacttat tttattgtgt ggtatcgtaa
     4861 cgctattaat tcgaattata ccttttatca tgatttcaaa agtgcaattg cctgatgtcg
     4921 tggttcgatg gctatcattt attccgatca cactatttac ggcacttgtc attgacagca
     4981 ttattcagca gacgcctcat ggtgaggggt atacattaaa catcccttac attatcgcgc
     5041 tcattccgac ggttatttta tctttaatca cgcgtagttt aactattaca attattagtg
     5101 ggattgttat catggcagca ttacgatttt tcttttaaaa ataactgaaa atcattgaac
     5161 agatatttaa acttaggtaa actgttagta atcagaaaat tctgatatac aaatcgtcta
     5221 tgttaagatt gggaatcgtg tatacgtaag cgatttggct aacgcatgac aatgataaca
     5281 acattttaaa tgataaaagt aattcatcac tgaatctcaa ctaacacata acaatttcat
     5341 atttcttatt gtgagaagtt gagggacttg gccctgtgat acttcagcaa ccgactttat
     5401 agcacggtgc taaaaccaac gagttactcg aatgataagt ataaagactt cttacttttc
     5461 aatagggtga gaagtttttt tgtttaagga ggaaagaaca atgacaaatt acacagtaga
     5521 tactttaaat ctagggaaat ttattacaga atctggggaa gtcatagata acttgcgttt
     5581 gagatatgag catgtcggtt atcatggaca accattagtt gtagtttgtc atgcattaac
     5641 tgacaatcat ttaacatatg gaacagatga ttatccgggg tggtggcgag aaattattga
     5701 tgggggatat attcccattc acgattatca atttttaaca tttgatgtta ttggtagtcc
     5761 tttcggttca agttcacctt taaacgaccc tcattttcct aaaaaattaa cattaagaga
     5821 tattgttaga gcgaatgaac gaggtataca agcgcttggt tatgacaaaa ttaatatttt
     5881 aataggggga agtcttggag gtatgcaagc aatggaacta ctttacaatc aacagtttga
     5941 agtagataaa gccattatcc ttgctgcaac aagccgaaca tcatcttata gtagagcttt
     6001 caatgaaatt gcgcgtcagg ccattcatct tggtggtaag gaaggactaa gtattgcacg
     6061 ccaattaggt tttttgacat atcgatcatc aaaaagttat gatgaacgtt tcacgccgga
     6121 tgaagtagtc gcataccaac aacatcaagg taataaattt aaagaacatt ttgatttgaa
     6181 ttgttatctg acactgctag atgtattgga tagtcacaac attgaccgag gtcgcacaga
     6241 tgtaacgcat gtttttaaaa atttagaaac gaaagtctta acgatgggat tcatagatga
     6301 tttgctatat ccggacgatc aagttcgtac tttaggtgaa cgttttaaat atcatcgtca
     6361 tttctttgta cctgataacg ttggtcatga cggattctta ttaaacttta atacatgggc
     6421 acctaactta tatcattttt tgaatttaaa gcattttaag cgcaagtaat aatgtatata
     6481 ttttcaaaga atgaagccac taaatcacag ttatcatatt caaaaacatc tagagtacat
     6541 gaaagtggaa atgaattgta aatctaaatc aagcttgatt tctatgtagt gggattaaat
     6601 aatcatgttg aaaatgaaag cacacaaaag cgattcaaat gagtatgtta attacttata
     6661 aaacatgaaa gttattattc aattaaatga aatagaagca tacaatctat aaattgttaa
     6721 tttccattaa agaggttaaa ataatagcta tagttaaaaa tatgggagtg gcttatgtgt
     6781 tttcaaaaat acaacctaaa gcaacaataa ttgcaacgat tgcgttggta tttgtcgctt
     6841 tagctttata tctagtgcct ggtttaggac taatatttgc attatttgca accataccag
     6901 gtatcgtttt atggaataaa tcaatacaat ctttcgggat tagtgcactt attacagtaa
     6961 ttataacaac tgttttaggt aatactttcg ttttaagtgc tatcatatta gtcttaattg
     7021 caagtttaat tattggtcaa ttgcttaaag aaaaaacgtc taaagaaaga atattgtacg
     7081 taacaacagt agcgatgagc ttaatttcat taatcgcttt tatgttacta caaacatttg
     7141 taagaattcc accatcagcg agcatagtaa aacctttcaa gcaaacatta catgaagcga
     7201 ttacgatgag cggtgccgat gcgaatatga cccaaatatt agaagaaggg tttagacaag
     7261 cgaccgttca attaccaggt ttcatcatta tcattacatt tttaatcgtc ttaattaact
     7321 taatcgttac atttccgatt ttacgaaaat ttaaaatcgc tacacctgta tttaagccac
     7381 ttttcgcgtg gcaaatgagc ggtattttgt tatggatata cattattgtt atcatatgtt
     7441 tattatttac aggtcaaccg agtgtgttcc agagcattct tttaaacttc caacttgtgt
     7501 tatcattagt gatgtatatt caaggtttaa gtgttattca tttctttggt aaagcgaaag
     7561 gtttgccgaa tgcagtaacg attttactat tgattatcgg tacaatactg acacctacga
     7621 cgcatattgt aggactactt ggtgttatcg atttaagttt gaatttgaag cgaatcatga
     7681 aaaataattc taaaaagtga atagaggtgg aataatgaat cggcagtcca ctaagaaagc
     7741 tttactaata ccatttgtca tcatgatcat cacagcaatt gttttaatgg gtgtatggtt
     7801 tatctttaat agtcttatag cactaattgc atctatcgtt cttgtcgtga tgattattgt
     7861 tagcatcgtt ttattcagac aagctttaat gaaaatggat agttatgtag atggtttgag
     7921 tgctcaaatt tcaacaacaa ataataaagc aatcaaacat ttaccaattg gtatcattgt
     7981 tttagatgaa aatgatcaca tcgaatgggt taaccaattt atgacagatc atatggaagc
     8041 aaatgtcatt tctgaatctg taaatgaagt atttccaaac attttaaagc aattagatag
     8101 agtgaaatcc gttgaaatag aatataatca gtatcatttc caagtacgtt attctgagaa
     8161 tgatcactgc ctctatttct ttgatataac tgaacaagta caaacaaatg aactatatga
     8221 aaattctaaa ccaatcattg cgacattatt tttagataac tacgatgaga ttactcaaaa
     8281 tatgaatgat acgcagcgtt cggaaatcaa ttcaatggta acgcgtgtca ttagtcgatg
     8341 ggcgactgag tataatatat tctttaaaag gtatagttcc gatcaattcg tagcctattt
     8401 aaatcaaaaa atattagctg acttagaaga atctaaattt gatatcttga gtcaattacg
     8461 tgaaaaaagt gttggttatc gtgcccaatt aacattaagt atcggtgttg gtgaaggcac
     8521 tgaaaattta atcgatttag gtgaattatc acaatcaggc ctagacttag cattaggacg
     8581 tggtggtgac caagttgcaa ttaaaagtat taatggtaat gtgcgtttct atggcggtaa
     8641 gactgacccg atggagaaac gtactcgtgt aagagcacgt gtgatctcac atgcgttaaa
     8701 agatatcctt gcagagggtg acaaagtcat tatcatgggg cataaacgtc ctgacttaga
     8761 tgcaattggt gcagcaatcg gtgtgtctag atttgcaatg atgaataatt tagaagcata
     8821 catcgtatta aatgaaactg acattgatcc aacattacga cgcgtgatga acgaaattga
     8881 taaaaagcca gagttaagag agcgatttat tacatcagat gatgcttggg atatgatgac
     8941 atctaagaca accgtagtga ttgttgatac gcataaaccg gaactggttt tagatgaaaa
     9001 tgtcttaaat aaagcaaacc gtaaagttgt tatcgatcat catagacgtg gtgaaagctt
     9061 catctctaat ccattgttgg tatatatgga accatatgca agttcgacag ctgaattggt
     9121 aacagagtta ctggaatatc aaccaacaga acaacgttta acacgtcttg aatcaacagt
     9181 gatgtatgca ggtattattg tagatacaag aaactttaca ttacgaacag gatcaagaac
     9241 attcgatgca gcgagttatc tacgtgcaca tggtgcagat acgattttaa cgcaacattt
     9301 cttaaaagat gatgtggata cttacattaa tcgatctgaa ttaattcgaa ctgtaaaagt
     9361 cgaagataat ggcatagcaa ttgcgcatgg ttcagaagat aaaatttatc atccagtaac
     9421 agttgcacaa gcagcagatg aactgttaag tttagaaggt attgaagcat catatgttgt
     9481 tgcgagacgt gaagataatc tgattggtat atctgcgcgt tcactcggtt cagtaaatgt
     9541 ccagttaaca atggaagcac ttggtggcgg tggacattta accaatgctg caacacaact
     9601 taaaggtgtg acagtcgaag aggcgatagc acaattacaa caagcaatta cagaacaatt
     9661 aagtaggagt gaagatgcat gaaagtaatt tttacacaag atgttaaagg taaaggtaaa
     9721 aaaggtgaag ttaaagaagt accagtaggt tatgcaaata acttcttatt gaaaaagaat
     9781 tatgctgtag aagcaacacc aggtaacctt aaacaattag agttacagaa aaaacgtgca
     9841 aaacaagaac gccaacaaga aattgaagat gctaaagcat taaaagaaac tttatcaaac
     9901 attgaagttg aagtatcagc aaaaactggt gaaggtggta aattgtttgg atcagtaagt
     9961 acaaaacaaa ttgccgaagc actaaaagca caacatgata ttaaaattga taaacgtaaa
    10021 atggatttac caaatggaat tcattcccta ggatatacga atgtacctgt taaattagat
    10081 aaagaagttg aaggtacaat tcgcgtacac acagttgaac aataaagttg gattgaaata
    10141 agaggtgtaa ccattcatgg atagaatgta tgagcaaaat caaatgccgc ataacaatga
    10201 agctgaacag tctgtcttag gttcaattat tatagatcca gaattgatta atactactca
    10261 ggaagtgttg cttcctgagt cattttatag gggtgcccat caacatattt tccgtgcaat
    10321 gatgcactta aatgaagata ataaagaaat tgatgttgta acattgatgg atcaattatc
    10381 gacggaaggt acgttgaatg aagcgggtgg cccgcaatat cttgcagagt tatctacaaa
    10441 tgtaccaacg acgcgaaatg ttcagtatta tactgatatc gtttctaagc atgcattaaa
    10501 acgtagattg attcaaactg cagatagtat tgccaatgat ggatataatg atgaacttga
    10561 actagatgcg attttaagtg atgcagaacg tcgaatttta gagctatcat cttctcgtga
    10621 aagcgatggc tttaaagaca ttcgagacgt cttaggacaa gtatatgaaa cagctgaaga
    10681 gcttgatcaa aatagtggtc aaacaccagg tattcctaca ggatatcgag atttagacca
    10741 aatgacagca gggttcaacc gaaatgattt aattatcctt gcagcgcgtc catctgtagg
    10801 taagactgcg ttcgcactta atattgcaca aaaagttgca acgcatgaag atatgtatac
    10861 agttggtatt ttctcactag agatgggtgc tgatcagtta gccacacgta tgatttgtag
    10921 ttctggtaat gttgactcaa accgcttaag aaccggtact atgactgagg aagattggag
    10981 tcgttttact atagcggtag gtaaattatc acgtacgaag atttttattg atgatacacc
    11041 gggcattcga attaatgatc tacgttctaa atgtcgtcga ttaaagcaag aacatggctt
    11101 agacatgatt gtgattgact acttacagtt gattcaaggt agtggttcac gtgcgtccga
    11161 taacagacaa caggaagttt ctgaaatctc tcgtacatta aaagcattag cccgtgaatt
    11221 agaatgtcca gttatcgcgt tgagtcagtt atctcgtggt gttgaacaac gacaagataa
    11281 acgtccaatg atgagtgata ttcgtgaatc tggttcgatt gagcaagatg ccgatatcgt
    11341 tgcattctta taccgtgatg attactataa ccgtggcggc gatgaagatg atgacgatga
    11401 tggtggtttt gagccacaaa cgaatgatga aaacggtgaa attgaaatca tcattgctaa
    11461 gcaacgtaat ggtccaacag gcacagttaa gttacacttt atgaaacaat ataataaatt
    11521 taccgatatc gattatgcac atgcagatat gatgtaaaaa aagtttttcc gtacaataat
    11581 aatcattatg ataaaattgt acggttttta ttttgttctg aacgggttga tatatgttaa
    11641 gtttgtgtat tggaagtgat gaattagtgc tggaaacacc tatgttaaag ggtttttagg
    11701 acgtttatga ctatttgtaa aaatgatttt tcttttaaaa aggccgaaaa ttaatgttcg
    11761 atttttattt gcattatggt ctcgatattg gtagaatatc aaatggttaa atgagaaaaa
    11821 cttggaggtg ctcacatgtc atcaatcgta gtagttggga cacaatgggg agacgaagga
    11881 aaaggaaaga ttacggattt cttggcagaa cagtcagatg ttatcgcgcg tttttcaggt
    11941 ggtaataatg caggccatac cattcaattt ggcggagaaa catataaatt acatttagta
    12001 ccatctggta tcttttacaa agataaatta gcggtaatcg gtaacggagt cgttgttgat
    12061 ccagttgcac tattgaaaga attagacgga ttaaatgaac gtggcattcc tacaagtaat
    12121 ttacgtatat ctaatcgtgc gcaagtgatt ttaccatatc acttagcaca agatgaatat
    12181 gaagaacgtt tacgtggtga caataagatt ggtacaacta aaaaaggtat cggtccagca
    12241 tatgtagaca aagttcaacg tatcggtatt cgtatggcag atttacttga aaaagaaaca
    12301 ttcgaaagat tattaaaatc aaacattgaa tataaacaag catatttcaa aggtatgttt
    12361 aacgaaacat gtccatcatt tgatgatatc tttgaagaat attatgcagc aggtcaacgt
    12421 ctaaaagaat ttgtaacaga cacatcaaaa atcttagatg atgcatttgt agcagatgaa
    12481 aaggtacttt tcgaaggtgc gcaaggtgta atgttagata tcgaccatgg tacatatcca
    12541 ttcgttacat caagtaatcc aattgcaggt aacgttactg ttggtacagg tgtaggtcct
    12601 acattcgttt caaaggtaat tggtgtatgt aaagcttata catcacgtgt tggtgatggt
    12661 ccattcccta ctgaattatt cgatgaagat ggacatcata ttagagaagt tggtcgtgaa
    12721 tacggtacaa caacaggacg tccacgtcgt gtaggttggt ttgattcagt tgtattacgt
    12781 cactctcgtc gtgtaagtgg tattacagat ttatctatta actcaatcga tgttttaaca
    12841 ggcctagaca cagtgaaaat ctgtacagct tatgaattag acggtaaaga aattactgag
    12901 tacccagcaa acttagatca attaaaacgt tgtaaaccaa tctttgaaga gttaccaggt
    12961 tggacagaag acgtaacaag tgtgcgtact ttagaagaat tacctgaaaa tgcacgtaaa
    13021 tatttagagc gtatttcaga attatgtaat gtacaaattt ctatcttctc agttggtcca
    13081 gatagagaac aaacaaacct attaaaagaa ttgtggtaga actttatata agtcatacac
    13141 aatgattata aatacatgag ccttctatct ttattggtag gaggcttttg ctatgtttgc
    13201 ttctgtatcg attcgattat ttagataaaa attactaacg taaaggtggt atttgctagt
    13261 cataatttaa aagattagat gatatttaac gaaaattaag atgaaatact tgaatgtaat
    13321 aagtctgatg tcgaaaatag ctattaaaat agagtagacg taagtataaa tgaaagcatc
    13381 taaaatagaa aaatttcaaa aatagcgtaa ttattacaat aaatagactg ccaataaaat
    13441 gcaatttttc acttataaca ttcttcaaaa aataatagca aaattatgta aaaaatatct
    13501 tgtcatggca agattggctg tgctataatc tatcttgtgc ttaagaacgg ctccttggtc
    13561 aagcggttaa gacaccgccc tttcacggcg gtaacacggg ttcgagtccc gtaggagtca
    13621 ccatttttta ggtctcgtag tgtagcggtt aacacgcctg cctgtcacgc aggagatcgc
    13681 gggttcgatt cccgtcgaga ccgtacaaat gcctatccaa gaggataggc atttttttgc
    13741 gtttaatatt atattaataa aagacatatg gacgaatgat aatcatattg atttatctgt
    13801 tcgtccattt tctttataat gtatgaacct cgagtaactt agtggttgga tatgaaagat
    13861 aaacgtagac aataaaatct ttattagacg tacaaatata tgctactgtc aacatatttc
    13921 ttcgttgtga tatgccacca atcctccata acatcaattg ttaaagtaac gaataatgat
    13981 atttattttc tgggcaatga cgtgcaacta gaagttgcca ttaccctaat tttattattg
    14041 gaatagagcc ctcatcattg tgttaaatat cattatcaca atccgccgtg agaaactaat
    14101 aaaaaatatt aatatataag tttatattgg aaaatagaat taatagctta taaatggtaa
    14161 attatataat aggttactat acgttatgag acggaaaatg cgcacaataa caaaaatagt
    14221 aagcgacatc ctgtgatttt ttacacaaac ataaacgata aagaacaaaa aatgataaaa
    14281 taatattaat gatttaagaa aagaggttta tgcaaatggc tagaaaagtt gttgtagttg
    14341 atgatgaaaa accgattgct gatattttag aatttaactt aaaaaaagaa ggatacgatg
    14401 tgtactgtgc atacgatggt aatgatgcag tcgacttaat ttatgaagaa gaaccagaca
    14461 tcgtattatt agatatcatg ttacctggtc gtgatggtat ggaagtatgt cgtgaagtgc
    14521 gcaaaaaata cgaaatgcca attataatgc ttactgctaa agattcagaa attgataaag
    14581 tgcttggttt agaactaggt gcagatgact atgtaacgaa accgtttagt acgcgtgaat
    14641 taatcgcacg tgtgaaagcg aacttacgtc gtcattactc acaaccagca caagacactg
    14701 gaaatgtaac gaatgaaatc acaattaaag atattgtgat ttatccagac gcatattcta
    14761 ttaaaaaacg tggcgaagat attgaattaa cacatcgtga atttgaattg ttccattatt
    14821 tatcaaaaca tatgggacaa gtaatgacac gtgaacattt attacaaaca gtatggggct
    14881 atgattactt tggcgatgta cgtacggtcg atgtaacgat tcgtcgttta cgtgaaaaga
    14941 ttgaagatga tccgtcacat cctgaataca ttgtgacgcg tagaggcgtt ggatatttcc
    15001 tccaacaaca tgagtagagg tcgaaacgaa tgaagtggct aaaacaacta caatcccttc
    15061 atactaaact tgtaattgtt tatgtattac tgattatcat tggtatgcaa attatcgggc
    15121 tgtattttac aaataacctt gaaaaagagc tgcttgataa ttttaagaag aatattacgc
    15181 agtacgctaa acaattagaa attagtattg aaaaagtata tgacgaaaag ggctccgtaa
    15241 atgcacaaaa agatattcaa aatttattaa gtgagtatgc caaccgtcaa gaaattggag
    15301 aaattcgttt tatagataaa gaccaaatta ttattgcgac gacgaagcag tctaaccgta
    15361 gtctaatcaa tcaaaaagcg aatgatagtt ctgtccaaaa agcactatca ctaggacaat
    15421 caaacgatca tttaatttta aaagattatg gcggtggtaa ggaccgtgtc tgggtatata
    15481 atatcccagt taaagtcgat aaaaaggtaa ttggtaatat ttatatcgaa tcaaaaatta
    15541 atgacgttta taaccaatta aataatataa atcaaatatt cattgttggt acagctattt
    15601 cattattaat cacagtcatc ctaggattct ttatagcgcg aacgattacc aaaccaatca
    15661 ccgatatgcg taaccagacg gtcgaaatgt ccagaggtaa ctatacgcaa cgtgtgaaga
    15721 tttatggtaa tgatgaaatt ggcgaattag ctttagcatt taataacttg tctaaacgtg
    15781 tacaagaagc gcaggctaat actgaaagtg agaaacgtag actggactca gttatcaccc
    15841 atatgagtga tggtattatt gcaacagacc gccgtggacg tattcgtatc gtcaatgata
    15901 tggcacttaa gatgcttggt atggcgaaag aagacatcat cggatattac atgttaagtg
    15961 tattaagtct tgaagatgaa tttaaactgg aagaaattca agagaataat gatagtttct
    16021 tattagattt aaatgaagaa gaaggtctaa tcgcacgtgt taactttagt acgattgtgc
    16081 aggaaacagg atttgtaact ggttatatcg ctgtgttaca tgacgttact gaacaacaac
    16141 aagttgaacg tgagcgtcgt gaatttgttg ccaatgtatc acatgagtta cgtacacctt
    16201 taacttctat gaatagttac attgaagcac ttgaagaagg tgcatggaaa gatgaggaac
    16261 ttgcgccaca atttttatct gttacccgtg aagaaacaga acgaatgatt cgactggtca
    16321 atgatttgct acagttatct aaaatggata atgagtctga tcaaatcaat aaagaaatta
    16381 tcgactttaa catgttcatt aataaaatta ttaatcgaca tgaaatgtct gcgaaagata
    16441 caacatttat ccgagatatt ccgaaaaaga cgattttcac agaatttgat cctgataaaa
    16501 tgacgcaagt atttgataat gtcattacaa atgcgatgaa atattctaga ggcgataaac
    16561 gtgtcgagtt ccacgtgaaa caaaatccac tttataatcg aatgacgatt cgtattaaag
    16621 ataatggcat tggtattcct atcaataaag tcgataagat attcgacaga ttctatcgtg
    16681 tagataaggc acgtacgcgt aaaatgggtg gtactggatt aggactagcc atttcgaaag
    16741 agattgtgga agctcacaat ggtcgtattt gggcaaacag tgtagaaggt caaggtacat
    16801 ctatctttat cacacttcca tgtgaagtca ttgaagacgg tgattgggat gaataataag
    16861 gaacatatta aatctgtcat tttagcacta ctcgtcttga tgagtgtcgt attgacatat
    16921 atggtatgga acttttctcc tgatattgca aatgtcgaca atacagatag taagaagagt
    16981 gaaacgaaac ctttaacgac acctatgaca gccaaaatgg atacaactat tacgccattt
    17041 cagattattc attcgaaaaa tgatcatcca gaaggtacga tcgcgacggt ttctaatgtg
    17101 aataagctga cgaaaccttt gaaaaataaa gaagtgaagt ccgtggaaca tgttcgtcgt
    17161 gatcataact tgatgattcc tgatttgagc agtgatttta cattattcga ttttacgtat
    17221 gatttaccgt tatcaacata tcttggccaa gtactgaaca tgaatgcgaa agtaccaaat
    17281 catttcaatt tcaatcgttt ggtcatagat catgatgctg atgataatat cgtgctttat
    17341 gctattagta aagaccgcca tgattacgta aaattaacaa ctacaacgaa aaatgattac
    17401 tttttagatg cattagcagc agtgaaaaaa gatatgcaac catacacaga tatcatcaca
    17461 aacaaagata caattgatcg tacgacgcat gtttttgcac caagtaaacc tgaaaagtta
    17521 aaaacatatc gcatggtatt taacacgatt agtgttgaga aaatgaatgc tatactattt
    17581 gacgattcaa ccatcgttcg tagttcaaag agtggtgtta caacctacaa caataataca
    17641 ggtgtcgcaa actataacga taaaaatgaa aaataccact ataaaaactt gtccgaagat
    17701 gaagcaagtt ccagcaaaat ggaagaaacg attccaggaa cctttgattt tattaatggt
    17761 catggtggtt tcttaaacga agatttcaga ttatttagta cgaataatca gtcaggcgag
    17821 ctaacatatc aacgtttcct taatggttat ccaacgttta ataaagaagg ctctaatcaa
    17881 attcaagtca cttggggtga aaaaggcgtc tttgattatc gtcgttcgtt attgcgcacc
    17941 gacgttgttt taaatagtga ggataataaa acattgccga aattagagtc tgtacgttca
    18001 agcttagcga acaatagtga tattaatttt gaaaaagtaa caaacatcgc tatcggttac
    18061 gaaatgcagg ataactcaga tcataatcac attgaagtgc agattaacag tgaactcgta
    18121 ccgcgttggt atgtagaata tgatggcgaa tggtatgttt ataacgatgg gaggcttgaa
    18181 taaatgaact ggaaacttac aaagacactt ttcattttcg tgtttattct tgtcaacatc
    18241 gtgttagtat cgatttatgt taataaagtc aatcgctcac acattaatga ggttgagagt
    18301 aacaatgaag ttaattttca gcaagaagaa attaaagtac cggctagtat attgaataaa
    18361 tcagttaaag gtataaaatt agaacaaatt acggggcgtt caaaagactt tagttctaaa
    18421 gctaagggtg attcggattt gaccgcagca gacggtggaa aattattgaa tgcgaacatt
    18481 agtcaatcgg taaaggtcag tgacaataac ttaaaagatt tgaaagatta tgttaacaaa
    18541 cgtgtgttca aaggttcaga atatcaatta agtgaaatta gttctggttc tgtaaaatac
    18601 gaacaaacgt atgataattt cccgattttg aacaatagta aagcgatgtt gaactttaat
    18661 atagaagata acaaagcggc tagttataaa caatcaatga tggatgacat taagcccaca
    18721 gatggtgctg ataaaaagca tcaagtgatt ggtgtgagaa aagcaatcga ggcattatat
    18781 tataatcgtt acttgaaaaa aggtgatgaa gtcattaatg ctagactcgg ttactactca
    18841 gtcgtgaacg aaacgaatgt tcaattgtta caaccaaact gggaaattaa agtgaagcat
    18901 gacggtaagg ataaaacgaa tacttactat gtcgaagcga caaataataa ccctaaaatt
    18961 attaatcatt aatatgaatc gtaataagct agcattgcaa gctcatcata tgtgagaagc
    19021 ggtgctagct ttttgctggt acggtttatt atggctgatg tttttgcgtc ctaacttgcg
    19081 catttattca tatattaagt agaaccgcat tgtaaaatta gtgtaactgt tattttaaaa
    19141 actttagtat ttgcctaatc attgttataa taattaggac attcattgca cgtgattatc
    19201 aaaatttaat tataagagac cggtcgatga actaaagtta cataatagga aaggtataca
    19261 aaacagctaa tatactgata gtttctgtag ggaaaatcgt atatttgcac tgatgtatat
    19321 tgcagtcata tagagagatt gactgcttaa atagaaagga tgagccgctt gatacgcatg
    19381 agtgtattag caagtggtag tacaggtaac gccacttttg tagaaaatga aaaaggtagt
    19441 ctattagttg atgttggttt gactggcaag aaaatggaag aattgtttag tcaaattgac
    19501 cgtaatattc aagatttaaa tggtatttta gtaacccatg aacatattga tcatattaaa
    19561 ggattaggtg ttttggcgcg taaatatcaa ttgccaattt atgcgaatga aaagacttgg
    19621 caggcaattg aaaagaaaga tagtcgcatc cctatggatc agaaattcat ttttaatcct
    19681 tatgaaacaa aatctattgc aggtttcgat gttgaatcgt ttaatgtgtc acatgatgca
    19741 atagatccgc aattttatat tttccataat aactataaga agtttacgat tttgacagat
    19801 acgggttacg tgtctgatcg tatgaaaggt atgatacgtg gcagcgatgc gtttattttt
    19861 gagagtaatc atgacgtcga tatgttgaga atttgtcgtt atccatggaa gacgaaacaa
    19921 cgtattttag gcgatatggg tcatgtatct aatgaggatg cgggtcatgc gatgacagac
    19981 gtgattacag gtaacacgaa acgtatttac ttatcgcatt tatcacaaga taataacatg
    20041 aaagatttgg cgcgtatgag tgttggccaa gtattgaacg aacacgatat tgatacggaa
    20101 aaagaagtat tgctatgtga tacggataaa gctattccaa cgccaatata tacaatataa
    20161 atgagagtca ccctataaag ttccgcactg ctgtgagacg actttatcgg gtgctttttt
    20221 atgttgttgg tgggaaatgg ctgttgttga aattaaggtt ctagttgaaa tgtaaaaaat
    20281 aattcgatat taaatgtaat ttataaataa tttacataaa atcaatcatt ttaatataag
    20341 gattatgata atatattggt gtatgacagt taatggaggg aacgaaatga aagctttact
    20401 acttaaaaca agtgtatggc tcgttttgct ttttagtgtg atgggattat ggcatgtctc
    20461 gaacgcggca gagcagcata caccaatgaa agcacatgca gtaacaacga tagacaaagc
    20521 aataacagat aagcaacaag taacgccaac aaaggaagcg gctcatcatt atggtgaaga
    20581 agcggcaacc aacgtatcag catcagcgca gggaacagct gatgatacaa acaacaaagt
    20641 aacttccaac gcaccatcta cagcagcttc aacaacagta aacgaaacgc gtgatgtaga
    20701 tacacaacaa gcctcaacac aaaaaccaac tcgcacagca acattcaaat tatcaaatgc
    20761 tgaaacagca tcactttcac cacgaatgtt tgctaccaat gcaccacaaa caacaacaca
    20821 taaaatatta catacaaatg atatccatgg ccgactagcc gaagaaaaag ggcgtgtcat
    20881 cggtatggct aaattaaaaa cagtaaaaga acaagaaaag cctgatttaa tgttagacgc
    20941 aggagacgca ttccaaggtt taccactttc aaaccagtct aaaggtgaag aaatggctaa
    21001 agcaatgaat gcagtaggtt atgatgctat ggcagtcggt aaccacgaat ttgactttgg
    21061 atacgatcag ttgaaaaagt tagagggtat gttagacttc ccgatgctaa gtactaacgt
    21121 ttataaagat ggaaaacgcg catttaaacc atcaacgatt gtaacgaaaa atggtattcg
    21181 ttatggaatt attggcgtaa cgacaccaga aacaaagacg aaaacaagac ctgaaggcat
    21241 taaaggtgtt gaatttagag atccattaca aagtgtgaca gcagaaatga tgcgtattta
    21301 taaagacgta gatacatttg ttgttatatc acatttaggg attgatccat caacacaaga
    21361 aacatggcgt ggtgattact tagtgaaaca attaagtcaa aatccacaat tgaagaaacg
    21421 tattacagtc attgatggtc attcacatac cgtacttcaa aatggtcaaa tttataacaa
    21481 tgatgcatta gcacaaacag gtacagcact tgcgaatatc ggtaagatta catttaatta
    21541 ccgcaatgga gcggtatcga atattaagcc gtcattgatt aacgttaaag acgttgaaaa
    21601 tgtaacaccg aacaaagcat tagctgaaca aattaatcaa gctgatcaaa catttagagc
    21661 acaaacagca gaggttatta ttccaaataa tacgattgat ttcaaaggag aaagagatga
    21721 cgttagaacg cgtgaaacaa atttaggaaa cgcgattgca gatgctatgg aagcatatgg
    21781 cgttaagaat ttctctaaaa agactgactt tgccgtgaca aatggtggag gtattcgtgc
    21841 ctctatcgca aaaggtaagg tgacacgcta tgatttaatc tcagtattac catttggaaa
    21901 tacgattgcg caaattgatg taaaaggttc agacgtctgg acagctttcg aacatagttt
    21961 aggcgcacca acaacacaaa aagatggtaa gacagtatta acagcgaatg gcggtttact
    22021 acatatctct gattcaatcc gtgtttacta tgatatgaat aaaccgtctg gcaaacgaat
    22081 taatgctatt caaattttaa ataaagagat aggtaagttt gaaaatattg atttaaaacg
    22141 tgtatatcac gtaacgatga atgacttcac agcatcaggt ggcgacggat atagtatgtt
    22201 cggtgggcct agagaagaag gtatttcatt agatcaagta ctagcaagtt atttaaaaac
    22261 agctaactta gctaagtatg atacgacaga accacaacgt atgttattag gtaaaccagc
    22321 agtaagtgaa caaccagcta aaggacaaca aggtagcaaa ggtagtgagt ctggtaaaga
    22381 tacacaacca attgataaag acaaagtgat gaatccagcg aaacaaccag cttcaggtaa
    22441 agttgtgttg ttaccagcgc atagaggaac agttagtagt ggtagagaag gttctgatcg
    22501 cgcattggaa gggaatgctg tatcaagcaa gagtgggaaa caattggcta gcatgtcagc
    22561 acctaaagat agcgcgcatg agaaacagtt accaaaaact ggaactaatc aaagttcaaa
    22621 cccagcaacg atgtttgtat tagtagcagg tataggttta atcgcgactg tacgacgtag
    22681 aaaagctagc taaaatatat tgaaaacaat actactgtat ttcttaaata agaggtacgg
    22741 tagtgttttt ttatggaaaa aagctataac cgttgataaa tatgggatat aaaaacgggg
    22801 ataagtaata agacatcaag gtatttatcc acagaaatgg ggatagttat ccagaattgt
    22861 gtacaattta aagagaaata cccacaatgc ccacagagtt atccacaaat acacaggtta
    22921 tacactaaaa aatgggcata aatgtcagga aaatatcaaa aactgcaaaa aatattggta
    22981 taataagagg gaacagtgtg aacaagttaa taacttgtgg ataactggaa agttgataac
    23041 aatttggagg accaaacgac atgaaaatca ccattttagc tgtagggaaa ctaaaagaga
    23101 aatattggaa gcaagccata gcagaatatg aaaaacgttt aggcccatac accaagatag
    23161 acatcataga agttccagac gaaaaagcac cagaaaatat gagcgacaaa gaaattgagc
    23221 aagtaaaaga aaaagaaggc caacgaatac tagccaaaat caaaccacaa tcaacagtca
    23281 ttacattaga aatacaagga aagatgctat cttccgaagg attggcacaa gaattgaacc
    23341 aacgcatgac ccaagggcaa agcgactttg tattcgtcat tggcggatca aacggcctgc
    23401 acaaggacgt cttacaacgt agtaactacg cactatcatt cagcaaaatg acattcccac
    23461 atcaaatgat gcgggttgtg ttaattgagc aagtgtatag agcgtttaag attatgcgtg
    23521 gagaagcgta tcataaatga tggggtttta agtacgattt aataaactaa aataagatag
    23581 gggaattaag aaatgggaat ttatcattta aataaagata aagatgtatt gacagattta
    23641 aagtcaaatg aaaaacaaga gcaggttgct acatttataa ataaacatct ttcagcaaat
    23701 aatttaacga tatttatcgg ttcaggatgc tcgacaggtg ctgttccttt aatgtctact
    23761 acaatgaaaa acatattaga agaaaatgag agtgtcttaa attatgtaaa aaaatttctg
    23821 aattctaaag ggattaaaga atttataaag tatgtagaag aacaagaaca agaaaaaata
    23881 caagagaaag aaagaaaagc gttacataca ataatggatc aattagaggc tgaaaatttt
    23941 aaaaatttag aagaatatag tggttggtta gatatgcaag atagtgaata taaagaagaa
    24001 atattgaatt ttttagattg ttattatcta aattatagta atattgagga attactaaat
    24061 tggatacaaa atggacttca ttatgacaat aataatggag atttgaaaga cgtgtttact
    24121 actttaaaaa gtgagtttat aaaaactatt cctaaagtgg gtgataaaga atacagtaca
    24181 gaaacttatg aaatatataa ggacttttat cgttatgtat ttgataaaag aactgaacaa
    24241 aaatctaaag tatcaatttt cactacaaat tatgatttgt ttaatgaata tgcacttgag
    24301 aataataata ttatctatag tacggggatt caaaatacaa tacttaaaaa atttgacatt
    24361 aatcaattta aatacagagt tgtagatgat acaaacaggt ataaagaaaa atggcaacca
    24421 gtatctaaag aggcaaattt atataaaata catggttcga taaattggaa gtccaatgaa
    24481 gaaggggaat tgcaacaaat cgattttaat gatgaagatg atcaggtggt catttatcca
    24541 accatgttga aacacaagga aacagcacaa gcaccgtatt cagaattgtt cagagaattc
    24601 tctaattgtt tacagataaa agatactact ttaattatta tagggtatgg attcccagat
    24661 gaacatatta ataatataat agctcagaat ttaaagaatc aagattttaa tttaataata
    24721 tttggtgatg ttaaagaaga aaacgtgaag aatttctatg ataattttaa gaattttaat
    24781 ttacatctta tcggaggtaa ttcaagtaaa gcagagcaaa aagcacatta tttccagttt
    24841 atcgtagaaa attttctgaa aaatcaaagg agaagataaa ataaatgcat agtattggaa
    24901 aagtcacaag tgttacattt gaaaagttaa tattcgaagt tagtgatttt gaaaaactaa
    24961 attataattt gttaggtcaa atttacatag ctaaaggtgt aatagactat gtaacaataa
    25021 aaaatgaata tagtgaaaaa tttatatatc aagttgtaaa agtagaagat aaagaaattc
    25081 cattatcttc tgaagagcac tctaaattta aatatcatgg taggtttgag tgtgtaccag
    25141 taggaatgat taaacatgga aaaattgagt ttaatttaaa gaaatatcct tttttacaag
    25201 ataaagttta tttaacaagt caagaagaaa tggaaatggt attttcacat tttcataatg
    25261 gaaatgatat aactattgga ctcattgatg accaatatcc agcttatttt aatactgcta
    25321 aattattaac gaatcataca gctataattg gaaatactgg atctggcaaa tctacaacag
    25381 tacgtcagat tatttcaaaa atcaacaatc taaacaccca aaatttacac tttcacatat
    25441 tcgatgtcca tgatgaatat aaagatataa atggagtgaa aatagtagat gtaataaatg
    25501 actttaaaat taatattaaa aatttagaga tgcaagactg gataaatttg attaaaccat
    25561 cggaactagt tcaattacct attttacaaa tgggattaaa atatgccaat gctattgaaa
    25621 ataaaattat agaggaagaa tggttgaagt gttatatagc gctatcatta tatagaaatc
    25681 agcaaacaga tgctgttaca aagcgaacta agattttaag catattagat ggaacaaata
    25741 ttgacacaga aaaatatgat tctaaatatg gaaatatgga cagcaatact gaaaaaaaat
    25801 ttatcgagag tttgaaaaat gtagtagata atggtggtaa tatatttact ttaagcgaag
    25861 taattgaaaa agcaaaatat aatgtatcga gttttaataa attattagaa ggattaaact
    25921 atgtattttt acttgaagaa agtaaaggaa ataatcaagc aagatcatat tcagcaacac
    25981 ttgaaacgcg tataaaaaat gttcaaacac gattttcaaa tttatttgga aataatgata
    26041 ctgaactgga agataaatca attgtttatt cagtttcaga attagatgat gatttgttat
    26101 tatttttcac aacatttatt ttaaaaaaag aatttgaaaa aaacaaaaaa atgaaattag
    26161 aagatcgttc agtgaacgtt tttatatttg aagaagctca tagatatata tcgaaattta
    26221 aagaaagtag ccaatttaat gaagtagaag cattcaaaaa gatagctaga gaaggaagga
    26281 aattcggttg ttttttaatg ttatctagtc aaaggccaag tgagctgtct tctactgtct
    26341 tatcacaatg caataattat atagtccata gggtaaaaaa taatgtagat ttagaatatt
    26401 tactaaattc cattccctac ataaataaat ttcaattaaa tcgtttttct tatttaccta
    26461 ctggaacagc ttatatagta ggagaattat ttccaatccc tgtagaaata gaaatatttg
    26521 aagagttttc gaaaaacagc acgattacac ctgaaatagt atatagatct tgaataataa
    26581 ctacgctcat tttggatgat tatgtgttat acgaaattaa taaacataac tacgcgttga
    26641 taacaaaaat aaatgacttt aaaattacta cttgacatat tttataaaga ctagaggtta
    26701 aaattttttt actctcttaa tgagcaggaa tttatggcca aattaataca tttactttca
    26761 attttatata gacttagttc agataagaaa tttactgtga aacaaatttc agacacctgt
    26821 cataatggtg ggaaatcttt atatagtgct attacaaatt tgaaaaaata atcacatttg
    26881 gagcaagtaa ttgatataga aaagcatgcc gctagtcttg aaatagcaaa tgaagagttg
    26941 gataaaatct aaagtaagtt ataataaaaa agcaattaat ataaatgtat cattaattat
    27001 ataatacaga aaacgttgtt ttttgacatt gaaatatttg tatatacttt gatgagaaat
    27061 agttgtgtga aagttacgaa atagaaatat atcccaaaaa gcgtatgaga actaagaaag
    27121 gaagtctcga ataatgaaaa cacctattta ttatacgatt gtaaataaag gcaataatat
    27181 tgaaaataca atatttcaga caccaccaaa tacagttagt gactttgacc atttggatgt
    27241 tatgcgttac ttaccatcaa ttgttgatat tagtgagatt tgtttattag ccgaagcaaa
    27301 aaaaatacca gagtttaaaa aatcgctaga cttcattctt aataaatttg aaacatatac
    27361 atttaatatt gttaatgatt taattgaaat aacactaacg aaagacgcat tattaaatta
    27421 tcaaaagtac ttgttacatc aatcaatcat aataagtaaa tcattagctt taaaaaatag
    27481 taacaatggt ttatgtacac aagaattaaa atcccaatta tatggatatg aaaagcttca
    27541 ttatgaacca gcctttcata tattagataa cgatttaatt cctaatatta atgaagagca
    27601 aagtgaattg ataccccttg agcatgttgt tttattatct gatgggatta gttatttaat
    27661 ggattatttt gacaaaaatc ctgaagcaac tttcacatta tacattgtga aagattacac
    27721 aagttattac gaggtagaat tataaaagca tttttattaa ttaaaatatt taggcgagct
    27781 aaatgcatag attgtggcaa gtattgtatt aaccatattg gtcaacatta aattgggaat
    27841 gtactaaacc taacacacaa agttatgtga ataaaaaaga tgatcttact tgatttacat
    27901 ttcctgagtt aaataatgaa atatagagca acttttcaag aggcattaaa gtatcttgaa
    27961 aagttgctta ttaaataata attgctcaaa taaaaaaaca tataaatgct cttaccaaaa
    28021 aaatattcgt aactaaaata tttcaaagta attaaaaagt gtgattaccc aaaaatccat
    28081 tttttattca gatagcctta atattgctcc taaatgttgc tgtgcagtag taaataatac
    28141 gaatgtaatt aattcaatga tttcttcatc tgtcatcgtt tcttttaata aacttatact
    28201 tgattcgggt atgttttgtt tagattttaa ataaacttca acaaagccaa cacaaagtag
    28261 agatttttcg tttagaaatt tatttgtagg actacctttt gctttgcaat attgacatcc
    28321 gttttgctgg gccagtaacc ttcttaactc ctcttttaat tctttactta ttgccccatc
    28381 gctacttaaa aaatcggata aattattcca gtattttaat aagtttttat tatgacctaa
    28441 tagcttttca aatggtgtgt ttccaatatt actgtattct aataatgtca tatcctcatc
    28501 tcctatctta atgatataca tgataaaatt gtatggaaat aagattttga aagtttatat
    28561 catttaatac tttgaaaaga gaggattttc tatgaatgac ttaataaatg aaaaaataat
    28621 caatgttttg ttaaataata gtagaattac tattaatgaa ttaagtaaac aagtgaactt
    28681 atctgctcca gctgtaagag aaagggtaaa taaacttgaa gatcaaggta ttataaaagg
    28741 ttatacaatt aacatagatt ataaggaatt aggttacgat gtagaaatat taattgagtt
    28801 aactataaag aataatagat acaaagattt taaagaattt atttcaaaac aagataatgt
    28861 tgagttttgt tatcgtgtat caggagaggc atgttttgta tttaaggttc ggttggaaaa
    28921 tatggatgaa gtggaaacat ttgttgatac catacaacca tatgggcaga caaaatgtca
    28981 gtttatcttt tcatcagttg tctaaactac atggaaaaag tttaataagc ataggaaaga
    29041 tttttaacag agagaagtga cttactttgg aatataaatc ttacaacaaa atgagtaata
    29101 atattttatc tatcttgttg agtgaaaaaa atttcgataa taaaatggta gtctcaacag
    29161 gtagttacat tttgtctgag ttgccatgta ttgttgccta taaaaataat gatatcgtgg
    29221 ggctactaac gtataaagtt tatgatgagt atattgaaat catttcttta gatagttttg
    29281 tagagaacaa gggtattggt agtcatttac ttaattatgc tgaaataatt gcctcagata
    29341 tgagtaaaag aagtatccgt gttattacta caaatgaaaa tattaaggca ctctatttct
    29401 atcaaaaaaa taaatataga atcacagacg ttatttttga tgctgtaaca gaagctagga
    29461 aaataaagcc gtcgattcct gcaattgata aaaatggcat tgaaattaga gatgaaattg
    29521 ttttgaggaa atgtttgtaa tgtataaata tactcagctt taaatcaccc tagttcatac
    29581 ctaaaagact ttcacacaaa caaaaaagga ggaacattaa attcctcctc aaactttatt
    29641 actcatacta taattcaatt ttaacgtctt cgtccatttg ggcttcaaat tcatctagta
    29701 gtgctcgtgc ttctgcaatt gattgtgtgt tcatcaattg atgtcgaagt tcactagcgc
    29761 ctcttatgcc acgcacatag attttaaaga atctacgcaa gctcttgaat tgtcgtattt
    29821 catctttttc atatttgtta aacaatgata aatgcaatct caacagatct aatagttctt
    29881 tgcttgtgtg ttcgcgtggt tctttttcaa aagcgaatgg attgtggaaa atgcctctac
    29941 caatcatgac gccatcaatg ccatattttt ctgcaagttc aagtcctgtt tttctatcgg
    30001 gaatatcacc gttaattgtt aacaatgtgt ttggtgcaat ttcgtcacgt aaatttttaa
    30061 tagcttcgat taattcccaa tgtgcatcta ctttactcat ttctttacgt gtacgaagat
    30121 gaatagataa atttgcaatg tcttgttcga agacatgctt caaccaatct ttccattcat
    30181 cgatttcata gtagccaagg cgtgttttaa cacttactgg aagcccgcct gctttagttg
    30241 cttgaataat ttcggcagcg acgtcaggtc ttaagattaa gccggaaccc ttaccctttt
    30301 tagcaacatt tgctacagga catcccatat ttaagtcaat gcctttaaag cccattttag
    30361 ctaattgaat actcgtttca cggaactgtt ctggcttatc tccccatatg tgagcgacca
    30421 tcggctgttc atcttcacta aaagttaagc gtccgcgcac actatgtatg ccttcagggt
    30481 gacaaaagct ctcggtattt gtaaattcag tgaaaaacac atccggtcta gctgcttcac
    30541 ttacaacgtg tcgaaagacg atatctgtaa cgtcttccat tggcgccaaa ataaaaaatg
    30601 gacgtggtaa ttcactccaa aaattttcct tcataatata tttataccct ctttataatt
    30661 agtatctcga ttttttatgc atgatgatat taccacaaaa gacgaactta tacaaaagga
    30721 attttagtag atacaaccat tcgaaaggga agtctacgag tagtctaaaa tgaatgttgt
    30781 gtaagttgat taatatacaa atcaaggatt atcgcgttaa attgttcatt attaatgata
    30841 cactgcttat tattatgatt cagaattttc tttagctaca tatacagtaa tgtgatttat
    30901 acgttatctt ataacaaaga caaatttata aaggtgatat tatggaagat ttaaaggaat
    30961 ctttaaaaag tttaggttgg tgggatttat tttttgcgat acctatgttt ctgctattcg
    31021 cataccttcc aaactataat tttataacga tatttcttaa cattgttatc attattttct
    31081 tttccatagg tttgatttta actacgcata taattataga taaaattaag agcaacacga
    31141 aatgaatcat taatacgaat gtgattaaac ataaaactga aggagcgatt acaatggcga
    31201 ctgagaaaga tgtaaatgat ttatttttaa atcatgtgaa ttcaaatgcc gttaaaacta
    31261 gaaagatgat gggagaatat attgtttatt atgatggtgt ggttataggt ggtttgtatg
    31321 ataatagact attggtcaag gcgactaaaa gtgcacgtca tcaatttcaa gataatacat
    31381 tagtatcgcc gtatcctggt gctaaagaaa tgatattaat tccagacatt accgaagtaa
    31441 caaatctcac tgatttattt gagctcataa aaaatgattt gcaaaagtga agttcggatg
    31501 gagtaaacta agcacatcga taaatggtcg cttgttaaag aagagtgacg gtcactcttc
    31561 tttatgtgca tattttattt tgtctgtttt gttaacgagc agcagtgtaa caaatatgag
    31621 taaggataaa atgagtataa tatagaaacc gaatttatca ttaatttcat taatccatct
    31681 tcctaaaaat ggagcaatga aactttgcag taacaatgaa attgacgtcc atatcgtaaa
    31741 tgagcgaccg acatatttat ctgaaacagt gttcattata gctgtattca tataaattct
    31801 gattgatgaa attgagtagc ctagtataaa tgatcctatg aataagtaaa atgctgagtt
    31861 tatccaaata aatagtgctg aatttatgac taatatgaaa tataacaaaa atatcaatgc
    31921 tttagttgag atttttttcg aaagaatagc tgaaattaaa cctgcacata atcctccaat
    31981 gccatataac atatctgaaa aaccaaattg tacagacgaa agttttaaaa cattatatac
    32041 atatcctggt aatgatatgt taaagatcat tgtaaacacc attggtatga ttgaaataac
    32101 tccaaaaata aatatcatca tgttgtcttt taaaaatttc catcctaata aatattcttg
    32161 caataagcta tttgttgatt cttcctctga atgagttggt ttatctacat gcaatctaaa
    32221 taacataaaa atgctgatta aaaacatcat tatagtcatc gctataatta gagtgaatcc
    32281 atttatttca tataatattc ctgataatcc acctgcaata aacatacctg tttgcaaact
    32341 aatctctaat agagaatttg catctgtata ttgatctggt tttaaaatct gtttaactaa
    32401 acttctagat gttgccatat acgtagtcca acctatccca ttaacaatcg caaatccaat
    32461 cactaaatag gtctcaaagc ctatcattaa gagtgctatg acaatgagta aatataatat
    32521 tacctgaaga agataggtga ttaaaataat atttcgtcta ttatatttat ctgctagtcc
    32581 acctattata ggagaagcta agaaaccgga taatacattt aaagctaaca taatacctaa
    32641 tagttgggag tcgttagttt tgtcgattaa ataccaatta gccccaactg tactaattcc
    32701 aactccgaat gctgaaatta tttctgctaa aaagaacaat ctgaagtttt taattttcaa
    32761 caaatcagtc ataaatatca ccttttttca atgcaagatt tatatttgcg agctcttcta
    32821 taaattgaga gtcgtttaaa atatcgaatg gtttattgcc ttcgccgatc aaaaatctat
    32881 agttagtaat attcataaac tcaaatatta atttgaattg gttgactaaa ggttgtgctt
    32941 tggtatgcgg attgtcgcca cctatgatta aaatcaaata ctttttttgt gacatgattt
    33001 ctttgaagtt atctatttgc gtatctcgca atgactcggt ccatctatca atgaagagtt
    33061 ttaaagacgc actcatggag taccaataga gtggtgttga aaaaataata atatctgatt
    33121 ctaaaacttt gattaaaatt tgttcgtaat catcattatg aaagttggca tctttgctat
    33181 gacgattatc tgtaaccttt tcaatgttac tttgatataa attcacaaag ttgacattta
    33241 aattcttcaa tagattctct actgcgatag ctgaattgcc atcttttcta ctacttccaa
    33301 ataaacaagt aatcatagt
//
LOCUS       DALMNS010000022        30238 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.022, whole genome shotgun sequence.
ACCESSION   DALMNS010000022 DALMNS010000000
VERSION     DALMNS010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 30238)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30238)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30238
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.022"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            190..1341
                     /locus_tag="O6Y56_000817"
     CDS             190..1341
                     /locus_tag="O6Y56_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family nicotinamide mononucleotide
                     deamidase-related protein"
                     /protein_id="HDB5574099.1"
                     /translation="MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGD
                     NKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHTVAQIVSKDLVIDEPSLKYIESY
                     FEEQGQEMTPNNKQQALVIEGSTVLANHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
                     KNELLSHFINHNRIIHSELLRFAGIGESKVETVLIDLIDKQTNPTIAPLAGSHEVYIR
                     LTANADSKEQAQSLIQPVKQEILDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITN
                     GALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFVNKLFNVPSAIILLE
                     YDGVVYIGYDNNLEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN"
     gene            1506..2549
                     /gene="recA"
                     /locus_tag="O6Y56_000818"
     CDS             1506..2549
                     /gene="recA"
                     /locus_tag="O6Y56_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499795.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDB5574100.1"
                     /translation="MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSV
                     TLDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEY
                     AQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
                     THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYS
                     SVRLEVRRAEQLKQGQEIVGNRTKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDL
                     GVENDIVDKSGAWYSYNGERMGQGKENVKMYLKENPQIKEEIDRKLREKLGISDGDVE
                     ETEDAPKSLFDEE"
     gene            2903..4462
                     /gene="rny"
                     /locus_tag="O6Y56_000819"
     CDS             2903..4462
                     /gene="rny"
                     /locus_tag="O6Y56_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002459258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HDB5574101.1"
                     /translation="MNLLSLLLILLGIILGVVGGYVVARNLLLQKQSQARQTAEDIVN
                     QAHKEADNIKKEKLLEAKEENQILREQTEAELRERRSELQRQETRLLQKEENLERKSD
                     LLDKKDEILEQKESKIEEKQQQVDAKESSVQTLIMKHEQELERISGLTQEEAINEQLQ
                     RVEEELSQDIAVLVKEKEKEAKEKVDKTAKELLATAVQRLAADHTSESTVSVVNLPND
                     EMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDG
                     RIHPGRIEDMVEKARKEVDDIIREAGEQATFEVNAHNMHPDLVKIVGRLNYRTSYGQN
                     VLKHSIEVAHLASMLAAELGEDETLAKRAGLLHDVGKAIDHEVEGSHVEIGVELAKKY
                     GENETVINAIHSHHGDVEPTSIISILVAAADALSAARPGARKETLENYIRRLERLETL
                     SESYDGVEKAFAIQAGREIRVIVSPEEIDDLKSYRLARDIKNQIEDELQYPGHIKVTV
                     VRETRAVEYAK"
     gene            complement(4759..4974)
                     /locus_tag="O6Y56_000820"
     CDS             complement(4759..4974)
                     /locus_tag="O6Y56_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574102.1"
                     /translation="MSINIDPEKFAELVVMSNPSKFEDAEDIAKESLKLYINAYRLAE
                     RYSTIATNCYDTAEVIKELKKTDLQLK"
     gene            5148..5945
                     /locus_tag="O6Y56_000821"
     CDS             5148..5945
                     /locus_tag="O6Y56_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HDB5574103.1"
                     /translation="MRIMFIGDIVGKIGRDAIETYIPQLKQKYKPTVTIVNAENAAHG
                     KGLTEKIYKQLLRNGVDFMTMGNHTYGQREIYDFIDEAKRLVRPANFPDEAPGIGMRF
                     IQINDIKLAVINLQGRAFMPDIDDPFKKADQLVKEAQEQTPFIFVDFHAETTSEKYAM
                     GWHLDGRASAVVGTHTHIQTADERILPKGTGYITDVGMTGFYDGILGINKTEVIERFI
                     TSLPQRHVVPNEGRSVLSGVVIDLDKEGKTKHIERILINDDHPFSTF"
     gene            6085..7845
                     /locus_tag="O6Y56_000822"
     CDS             6085..7845
                     /locus_tag="O6Y56_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HDB5574104.1"
                     /translation="MKPQLSWKVGGQQGEGIESTGEIFATAMNRKGYYLYGYRHFSSR
                     IKGGHTNNKIRVSTTPVHAISDDLDILIAFDQETIDVNHHEMREDSIILADAKAKPVK
                     PEGCHAQLIELSFTATAKELGTALMKNMVAIGATSALMNLNTNTFEELITNMFSKKGD
                     KVVEVNIQALNEGYQLMQSRLPEIDGDFELESTDALPHLYMIGNDAIGLGAIAAGSQF
                     MAAYPITPASEVMEYMIANISKVNGAVIQTEDEIAAVTMAIGANYGGVRAFTASAGPG
                     LSLMMEAIGLSGMTETPLVIINTQRGGPSTGLPTKQEQSDLMQMIYGTHGDIPKIVVA
                     PTDAEDAFYLTMESFNLAEQYQCPVIVLSDLQLSLGKQTVEKLDYNRIEIKRGEIIQS
                     DIEREEDDKGYFKRYALTSNGVSPRPIPGVKGGIHHITGVEHNEEGKPSESASNRQQQ
                     MEKRMRKIEQLLIESPVEANLQHEDADILYIGFISTKGAIQEGSNRLNQQGIKVNTIQ
                     IRQLHPFPTSVIQDAVNKAKKVVVVEHNYQGQLASIIKMNVNIHDKIENYTKYDGTPF
                     LPHEIEEKGKIIATEIKEMV"
     gene            7846..8712
                     /locus_tag="O6Y56_000823"
     CDS             7846..8712
                     /locus_tag="O6Y56_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HDB5574105.1"
                     /translation="MATFKDFRNNVKPNWCPGCGDFSVQAAIQKAAANIGLEPEEVAI
                     ITGIGCSGRLSGYINSYGVHSIHGRALPLAQGVKMANKDLTVIASGGDGDGYAIGMGH
                     TIHALRRNMNMTYIVMDNQIYGLTKGQTSPSSAVGFVTKTTPKGNIEKNVAPLELALS
                     SGATFVAQGFSSDIKGLTKLIEDAINHDGFSFVNVFSPCVTYNKINTYDWFKEHLTSV
                     DDIENYDSTDKQLATKTIIEHESLVTGIVYQDKETPSYESQIKELDDTPLAKRDIKIT
                     EDTFNALTEQFI"
     gene            8807..9100
                     /locus_tag="O6Y56_000824"
     CDS             8807..9100
                     /locus_tag="O6Y56_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-binding protein"
                     /protein_id="HDB5574106.1"
                     /translation="MKDTLMSIQIIPKTPNNDNVIPYVDEAIKIIDESGLHFRVGPLE
                     TTVQGNMNECLILIQSLNERMVELECPSIISQVKFYHVPDGITIETLTEKYDE"
     gene            9234..10778
                     /gene="miaB"
                     /locus_tag="O6Y56_000825"
     CDS             9234..10778
                     /gene="miaB"
                     /locus_tag="O6Y56_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDB5574107.1"
                     /translation="MNEEQRKASSVDVLAERDKKAEKDYSKYFEHVYQPPNLKEAKKR
                     GKQEVRYNRDFQIDEKYRGMGNERTFLIKTYGCQMNAHDTEVIAGILEALGYQATTDI
                     NTADVILINTCAIRENAENKVFSEIGNLKHLKKERPDILIGVCGCMSQEESVVNKILK
                     SYQNVDMIFGTHNIHHLPEILEEAYLSKAMVVEVWSKEGDVIENLPKVREGNIKAWVN
                     IMYGCDKFCTYCIVPFTRGKERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL
                     QDIEYDLGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGN
                     NAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEV
                     GFEHAYTYLYSQRDGTPAAKMKDNVPLDVKKERLQRLNKKVGHYSQIAMSKYEGQTVT
                     VLCEGSSKKDDQVLAGYTDKNKLVNFKAPKEMIGKLVEVRIDEAKQYSLNGSFVKQVE
                     PEMVIQ"
     gene            10779..11144
                     /locus_tag="O6Y56_000826"
     CDS             10779..11144
                     /locus_tag="O6Y56_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RicAFT regulatory complex protein RicA family
                     protein"
                     /protein_id="HDB5574108.1"
                     /translation="MYNKDDVLKQADNIANKIKNLDTIKTYQQIEAQIHQNQTIKTKM
                     DMLKKHQKQAVNFQNYGKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKM
                     FVSTMETRLNDHNKAKHSD"
     gene            11171..11662
                     /gene="thiW"
                     /locus_tag="O6Y56_000827"
     CDS             11171..11662
                     /gene="thiW"
                     /locus_tag="O6Y56_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy coupling factor transporter S component
                     ThiW"
                     /protein_id="HDB5574109.1"
                     /translation="MKSRKLAITALLIAINVVLSSIIIIPLGPVKAAPVQHFVNVLSA
                     VIVGPWYGLAQALISSILRVLFGTGTAFAFPGSMIGVLLASMFYIYRKHIFMAAVGEV
                     LGTGVIGSLICIPLAYFLGLQDFFIKPLMITFIVSSAIGSIISYFLLITLKKRGILKR
                     FIK"
     gene            11965..14583
                     /gene="mutS"
                     /locus_tag="O6Y56_000828"
     CDS             11965..14583
                     /gene="mutS"
                     /locus_tag="O6Y56_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HDB5574110.1"
                     /translation="MSNVTPMMQQYLKIKSEYQDCLLFFRLGDFYEMFYEDAKEASRV
                     LEITLTKRDAKKENPIPMCGVPYHSADSYIDTLVNNGYKVAICEQMEDPKQTKGMVRR
                     EVVRIVTPGTVMEQGGVDDKQNNYILSFVMNQPEIALSYCDVSTGELKVTHFNDEATL
                     LNEITTINPNEVVINDNISDHLKRQINMVTETITVRETLSSEIYSVNQTEHKLMYQAT
                     QLLLDYIHHTQKRDLSHIEDVVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWL
                     MDETKTPMGARRLKQWIDRPLISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIE
                     RLVGRVSYGNVNARDLIQLKHSISEIPNIKALLNSMNQDTLVHVNQLEPLDDLLDILE
                     QSLVEEPPISVKDGGLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKIS
                     FNKVFGYFIEITRANLQNFEPSEFGYMRKQTLSNAERFITDELKEKEDIILGAEDKAI
                     ELEYLLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYNYTRPSFSENKTLE
                     LVESRHPVVERVMDYNDYVPNNCRLDNETFIYLITGPNMSGKSTYMRQVAIISIMAQM
                     GAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDE
                     IGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEY
                     KGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFEASADKKSSISNLK
                     MIENEPEINQENSNLSVEETTDTLSQKDFEQASFDLFENDQESEIELQIKNLNLSNMT
                     PIEALVKLSELQNQLK"
     gene            14596..16605
                     /gene="mutL"
                     /locus_tag="O6Y56_000829"
     CDS             14596..16605
                     /gene="mutL"
                     /locus_tag="O6Y56_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HDB5574111.1"
                     /translation="MGKIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEIS
                     IEVEESGVQSIRVVDNGSGIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALAS
                     ISSVAKVTLKTCTDNANGNEIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYI
                     KSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEVMAEIYGMKVAR
                     DLVHISGDTSDYHIEGFVAKPEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLT
                     IGRFPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKN
                     NLDYVPKKNKVLHSFEQQKIEFEQRQNTENNQEKTFSSEESNSKPFMAENQNDEIVIK
                     EDSYNPFVTKTSESLIADDESSGYNNTREKDEDYFKKQQEILQEMDQTFDSNDDASVQ
                     NYENKASDDYYDVNDIKGTKSKDPKRRIPYMEIVGQVHGTYIIAQNEFGMYMIDQHAA
                     QERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSKDEQLVIDQYKNELQQVGIMLEHFGG
                     HDYIVSSYPVWFPKDEVEEIIKDMIELILEEKKVDIKKLREDVAIMMSCKKSIKANHY
                     LQKHEMSDLIDQLREAEDPFTCPHGRPIIINFSKYELEKLFKRVM"
     gene            16611..17153
                     /locus_tag="O6Y56_000830"
     CDS             16611..17153
                     /locus_tag="O6Y56_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate responsive antiterminator"
                     /protein_id="HDB5574112.1"
                     /translation="MNQVNNNILPAIRNIKDLEKLIKTDYKMCVLLDMHIGHIKSIME
                     LLKQNHIECFIHIDLIKGLSHDEFASEFIIQQYKPKGIVSTKSKVIKKAKSLNTLTIF
                     RVFIIDSQALKRSIDLIKKVEPDFVEVLPGVASKAIHHIQKETNTQVIAGGLINTIDE
                     VNEAVKNGAKYVTTSYDKLW"
     gene            17627..18445
                     /locus_tag="O6Y56_000831"
     CDS             17627..18445
                     /locus_tag="O6Y56_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HDB5574113.1"
                     /translation="MNVYLAEFLGTAILILFGGGVCANVNLKRSAANGADWIVITAGW
                     GLAVTMGVYAVGQFSGAHLNPAVSLALALDGSFDWSLVPGYIVAQMLGAIVGATIVWL
                     MYLPHWKATEEAGAKLGVFSTAPAIKNYFANFLSEIIGTMALTLGILFIGVNKIADGL
                     NPLIVGALIVAIGLSLGGATGYAINPARDLGPRIAHAILPIAGKGGSNWSYAIVPILG
                     PIAGGLLGAVVYAVFYKHTFNIGCAIAIVVVIITLILGYILNKSSKKGDIESIY"
     gene            18574..20070
                     /gene="glpK"
                     /locus_tag="O6Y56_000832"
     CDS             18574..20070
                     /gene="glpK"
                     /locus_tag="O6Y56_000832"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HDB5574114.1"
                     /translation="MEKYILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWV
                     EHDANEIWTSVLAVMTEVINENDVRADQIAGIGITNQRETTVVWDKHTGRPIYHAIVW
                     QSRQTQSICSELKQQGYEQTFRDKTGLLLDPYFAGTKVKWILDNVEGAREKAENGDLL
                     FGTIDTWLVWKLSGKAAHITDYSNASRTLMFNIHDLEWDDELLELLTVPKNMLPEVKP
                     SSEVYGKTIDYHFYGQEVPIAGVAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTGD
                     KAVKSESGLLTTIAYGIDGKVNYALEGSIFVSGSAIQWLRDGLRMINSAPQSESYATR
                     VDSTEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFIRATLESLCYQTRDVME
                     AMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIVNTSVERPEIQETTALGAAYLAGLAV
                     GFWESKDDIAKNWKLEEKFDPKMDECEREKLYRGWKKAVEATQVFKTE"
     gene            20229..21902
                     /locus_tag="O6Y56_000833"
     CDS             20229..21902
                     /locus_tag="O6Y56_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HDB5574115.1"
                     /translation="MALSTFKREYIKKNLRNDEYDLVIIGGGITGAGIALDASERGMK
                     VALVEMQDFAQGTSSRSTKLVHGGLRYLKQFQIGVVAETGKERAIVYENGPHVTTPEW
                     MLLPMHKGGTFGKFSTSIGLGMYDRLAGVKKSERKKMLSKKETLAKEPLVKKEGLKGG
                     GYYVEYRTDDARLTIEVMKRAAEKGAEIINYTKSEHFTYDKNQQVNGVKVIDKLTNEN
                     YTIKAKKVVNAAGPWVDDVRSGDYARNNKKLRLTKGVHVVIDQSKFPLGQAVYFDTEK
                     DGRMIFAIPREGKAYVGTTDTFYDNIKSSPLTTQEDRDYLIDAINYMFPSVNVTDEDI
                     ESTWAGIRPLIYEEGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMAQDIVDLVSK
                     RLKKDYGLTFSPCNTKGLAISGGDVGGSKNFDAFVEQKVDVAKGFGIDEDVARRLASK
                     YGSNVDELFNIAQTSQYHDSKLPLEIYVELVYSIQQEMVYKPNDFLVRRSGKMYFNIK
                     DVLDYKDSIIDIMADMLDYSPAQIEAYTEEVEQAIKEAQHGNNQPAVKE"
     gene            22051..22965
                     /locus_tag="O6Y56_000834"
                     /pseudo
     CDS             22051..22965
                     /locus_tag="O6Y56_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499811.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
     gene            22983..23918
                     /gene="miaA"
                     /locus_tag="O6Y56_000835"
     CDS             22983..23918
                     /gene="miaA"
                     /locus_tag="O6Y56_000835"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDB5574116.1"
                     /translation="MNKNKPFIVVIVGPTASGKTELSIELAKRINGEIISGDSMQVYK
                     HMNIGTAKVTPEEMDGIPHHLIDILNPDDTFSAYEFKRLAEDLITDITNRGKVPIIAG
                     GTGLYIQSLIYNYELEDETVTPAQLSVVKQKLSALEHLDNQQLHEYLAQFDEVSAKNI
                     HPNNRQRVLRAIEYYLKTKKLLSNRKKVQQFTENYDTLLIGIEMSRKTLYSRINKRVD
                     IMLDHGLFREVQQLVEQGYESCQSMQAIGYKELIPVINGQMIYEDAVNDLKQHSRQYA
                     KRQMTWFKNKMSVHWLDKENMSLQMMLDEITTQIK"
     gene            23933..24166
                     /gene="hfq"
                     /locus_tag="O6Y56_000836"
     CDS             23933..24166
                     /gene="hfq"
                     /locus_tag="O6Y56_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HDB5574117.1"
                     /translation="MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVV
                     SLNSQGKQHLIYKHAISTYTVETEGQESTESEE"
     gene            complement(24388..24864)
                     /locus_tag="O6Y56_000837"
     CDS             complement(24388..24864)
                     /locus_tag="O6Y56_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HDB5574118.1"
                     /translation="METIYDFVVETNKGVTYKLDAYMGDVMLIVNTASECGFTSQFEG
                     LQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEH
                     QLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL"
     gene            24976..26214
                     /gene="hflX"
                     /locus_tag="O6Y56_000838"
     CDS             24976..26214
                     /gene="hflX"
                     /locus_tag="O6Y56_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HDB5574119.1"
                     /translation="MAQQQIHDTKNKLEKAVLVGVHAQDDKQFNFESTMEELSSLSET
                     CQLEVLGQITQNRDRVDRKYYVGKGKIEEIQAFIEFKDIDVVITNDELTTAQSKSLNE
                     ALGVKIIDRTQLILEIFALRARSKEGKLQVELAQLDYLLPRLQGQGKSLSRLGGGIGT
                     RGPGETKLEMDRRHIRTRMNEIKHQLRTVEEHRERYRNKRNQNQVFQVALVGYTNAGK
                     SSWFNVLANEETYEKDQLFATLDPKTRQIQINDGFNLIISDTVGFIQKLPTTLIAAFK
                     STLEEAKGADLLVHVVDSSHPEYRTQYDTVNDLIKQLDMNHISQIVIFNKKDLCDHAS
                     NRPASDLPNVFVSSKNDGDKLLVKTLFIDEIKRQLTYYDEAIATNNADRLYFLKQHTL
                     VTELKYDEIENVYRIKGFKK"
     gene            26233..27474
                     /locus_tag="O6Y56_000839"
     CDS             26233..27474
                     /locus_tag="O6Y56_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000652034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDB5574120.1"
                     /translation="MKDISKIVADVESTLAPYFKEIEETAYINQEKVLNAFHHVKATE
                     SDLQGSTGYGYDDFGRDHLEEIYAQAFKAEDAIVRPQIISGTHAITIALQSLLKHGDE
                     LIYITGSPYDTLLEVIGVNGNGIESLMEHGVSYKDIALKEGKIDIESVLDGVSERTKV
                     IAIQRSKGYDQRPSIPLDEIEEVITRLKEVHPNILIFVDNCYGEFVERREPIECGADL
                     IAGSLIKNPGGGLAKIGGYIAGRKDLIERCGYRLTAPGIGKEAGASLNALLEMYQGFF
                     LAPHVVSQSLKGALFTSLFLEKMNMNTTPKYYEKRTDLIQTVKFKTKEQMISFCQSIQ
                     HASPINAHFSPEPSYMPGYEDDVIMAAGTFIQGSSIELSADGPIRPPYEAYVQGGLTY
                     EHVKIAVTRAVKQLKEQGLIE"
     gene            27715..28083
                     /locus_tag="O6Y56_000840"
     CDS             27715..28083
                     /locus_tag="O6Y56_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDB5574121.1"
                     /translation="MISNDAIRRNMAVFSMSVVSKLTDLTPRQIRYYETHELIKPERT
                     EGQKRLFSLNDLERLLEIKSLLEKGFNIKGIKQIIYDSQEHLTTDEQEIRKKMIVDAT
                     QKPIGETLPINRGDLSRFIK"
     gene            28102..29442
                     /gene="glnA"
                     /locus_tag="O6Y56_000841"
     CDS             28102..29442
                     /gene="glnA"
                     /locus_tag="O6Y56_000841"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDB5574122.1"
                     /translation="MPKRTFTKDDIRKFAEEENVRYLRLQFTDILGTIKNVEVPVSQL
                     EKVLDNEMMFDGSSIEGFVRIEESDMYLHPDLDTWVIFPWTAGQGKVARLICDVYKTD
                     GTPFEGDPRANLKRVLKEMEDLGFTDFNLGPEPEFFLFKLDEKGEPTLELNDDGGYFD
                     LAPTDLGENCRRDIVLELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKL
                     VVKTIARKHNLHATFMPKPLFGVNGSGMHFNVSLFKGKENAFFDPNTEMGLTETAYQF
                     TAGVLKNARGFTAVCNPLVNSYKRLVPGYEAPCYIAWSGKNRSPLIRVPSSRGLSTRI
                     EVRSVDPAANPYMALAAILEAGLDGIKNKLKVPEPVNQNIYEMNREEREAVGIQDLPS
                     TLYTALKAMRENEVIKKALGNHIYNQFINSKSIEWDYYRTQVSEWERDQYMKQY"
     gene            29935..30132
                     /locus_tag="O6Y56_000842"
     CDS             29935..30132
                     /locus_tag="O6Y56_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574123.1"
                     /translation="MNCYDEIYNTIKKLIENKEITSYQINKDTGISYGNINAMRRGER
                     RIENLSLKNAKILYEYAKKVL"
BASE COUNT        11192 a         4124 c         5751 g         9171 t
ORIGIN      
        1 gtattttcgt tcagtcaact tctgccaata taactttgta gagcattgaa cattgattta
       61 tgtctcaggc tcttgttcat tttattagga aaatgtgttg tagcatctga tacattgaat
      121 ctaaaattga tgtgaatttt taaatggaat acatgaaaaa aagaattaaa cgatacaagg
      181 gggatacaaa tgtcaattgc cattattgct gtaggctcag aactattgct aggtcaaatc
      241 gctaatacca acggacaatt tctatctaaa gtatttaatg aaattggaca aaatgtatta
      301 gaacataaag ttattggaga taataaaaaa cgtttagaat caagtgtacg tcatgcgtta
      361 gaaaaatatg atactgttat tttaacaggt ggattaggtc ctacgaaaga tgatttaacg
      421 aagcatacag tggcccagat tgttagtaaa gatttagtta ttgatgagcc ttctttaaaa
      481 tatattgaaa gctattttga ggaacaagga caagaaatga cacctaataa taaacaacag
      541 gctttagtaa ttgaaggttc aactgtatta gcaaatcatc atggcatggc tccaggaatg
      601 atggtgaatt ttgaaaacaa acaaattatt ttattaccag gtccaccgaa agaaatgcaa
      661 ccaatggtaa aaaatgaatt gttgtcacat tttataaacc ataatcgaat tatacactct
      721 gaactattaa gatttgctgg aataggtgaa tctaaagtag aaacagtatt aatagatctt
      781 atcgataaac agactaatcc tacgattgcg cctttggcag gaagtcatga agtatatatt
      841 agattgactg caaatgccga ctcaaaagaa caagcacaat cattgattca acctgttaag
      901 caagaaattc ttgatcgtat tggagaatat tattatggtt cagatgacac attaattgag
      961 caagctgtaa taaagaaaat tcatgaacct tttgtaatat atgatggtat tactaatggt
     1021 gctttatatc atcgattgaa agaagtggat ttaaacgatg ttctaaaggg tatgattaat
     1081 cacaatgaaa actttgttga tattaataaa cctattgagc agcaattaaa agatgcagtg
     1141 caatttgtta ataaattatt taatgtgcca tcagcaatta ttctattaga gtatgatggt
     1201 gtagtctata taggctatga taataactta gaatttaaaa ctgagcaatt taaaatgtct
     1261 aaatctagaa atttattaaa gaacagaagt caaaattatg cgcttataag attattaaat
     1321 tggcttagaa caacaaatta attgtattat cgataaaaat ataagtacgt ttgttcgttt
     1381 ttgtgttttg atttcaagat tttatacgaa caaatattcg caaaacactt gtattttatt
     1441 ttgaatcctt gtatagtatt ggtaagataa ttaaaagata gcaatttcaa ttaggaggtc
     1501 tcgctttgga taacgatcgt caaaaagctt tagatacagt aattaaaaat atggagaaat
     1561 ctttcggtaa aggtgccgta atgaagttgg gtgacaatat aggtcgccga gtttcaacta
     1621 catcaactgg ttcagttaca ttagataatg cgctaggtgt aggtggctat cctaaaggac
     1681 gaattattga aatttatggt cctgaaagtt ctggtaagac aacagtagcg cttcacgcta
     1741 ttgctgaagt acaaagtaat ggcggggtgg cagcatttat cgatgctgaa catgctttag
     1801 atccagaata tgctcaagca ttaggcgtag atatcgataa tttatattta tcgcaaccgg
     1861 atcatggtga acaaggtctt gaaatcgccg aagcatttgt tagaagtggt gcagttgata
     1921 ttgtagttgt agactcagtt gctgctttaa cacctaaagc tgaaattgaa ggagaaatgg
     1981 gagacactca cgttggttta caagctcgtt taatgtcaca agcgttacgt aaactttcag
     2041 gtgctatttc taaatcaaat acaactgcta ttttcatcaa ccaaattcgt gaaaaagttg
     2101 gtgttatgtt cggtaatcca gagactacac caggtggacg tgctttaaaa ttctatagtt
     2161 cagtaagact agaagtacgt cgtgcagaac agcttaaaca aggacaagaa attgtaggta
     2221 atagaactaa aattaaagtc gttaaaaata aagtggcacc accatttaga gtagctgaag
     2281 ttgatattat gtatggacaa ggtatttcta aagagggtga acttattgat ttaggtgttg
     2341 aaaacgacat cgttgataaa tcaggagcat ggtattctta caatggcgaa cgaatgggtc
     2401 aaggtaagga aaatgttaaa atgtacttga aagaaaaccc acaaattaaa gaagaaattg
     2461 atcgtaaatt gagagaaaaa ttaggtatat ctgatggtga tgttgaagaa acagaagatg
     2521 caccaaagtc attatttgac gaagaatagt acacaaattt atatctatag ttaaacttag
     2581 caaatatcct tataggattg attgaaagtg atattcatct cataaagctg gaataatatc
     2641 taactttatg ggatgcactt caaatcgaga ctataaggtt ttttatttta tttattatta
     2701 cattatcaat agttttataa tcgagcttca aaactttaga aaatagtaga aatagcattc
     2761 aatatagtgc aaaagtgcaa attgataact tgacacttat ctcctataaa ccgtacaatt
     2821 aatttgtatg atttatatat aatttcataa agtcatattg aatttcatat aaagagcaaa
     2881 ccctagaaaa ggaggtgttt gtgtgaattt attaagcctc ctactcattt tgctggggat
     2941 cattctagga gttgttggag ggtatgttgt tgcccgaaat ttgttgcttc aaaagcaatc
     3001 acaagctaga caaactgccg aagatattgt aaatcaagca cataaagaag ctgacaatat
     3061 caaaaaagag aaattacttg aggcaaaaga agaaaaccaa atcctaagag aacaaactga
     3121 agcagaacta cgtgaaagac gtagcgaact tcaaagacaa gaaacccgac ttcttcaaaa
     3181 agaagaaaac ttagagcgta aatctgatct attagataaa aaagatgaga ttttagagca
     3241 aaaagaatca aaaattgaag aaaaacaaca acaagtagat gcaaaagaga gtagtgttca
     3301 aacgttaata atgaagcatg aacaagaatt agaacgcatc tccggtctca ctcaagaaga
     3361 agctattaat gagcaacttc aaagagtaga ggaagaactg tcacaagata ttgcagtact
     3421 tgttaaagaa aaagaaaaag aagctaaaga aaaagttgat aaaacagcaa aagaattatt
     3481 agctacagca gtacaaagat tagcagcaga tcacacaagt gaatcaacgg tatcagtagt
     3541 taacttacct aatgatgaga tgaaaggtcg aatcattgga cgagaaggac gaaacatccg
     3601 cacacttgaa actttaactg gcattgattt aattattgat gacacaccag aagcagttat
     3661 attatctggt tttgatccaa taagaagaga aattgctaga acagcacttg ttaacttagt
     3721 atctgatgga cgtattcatc caggtagaat tgaagatatg gtcgaaaaag ctagaaaaga
     3781 agtagacgat attattagag aagcaggtga acaagctaca tttgaagtga acgcacataa
     3841 tatgcatcct gacttagtaa aaattgtagg gcgtttaaac tatcgtacaa gttacggtca
     3901 aaatgtactt aaacattcaa ttgaagttgc gcatcttgct agtatgttag ctgctgagct
     3961 aggcgaagat gagacattag cgaaacgagc tggactttta catgatgttg gtaaagcaat
     4021 tgatcatgaa gtagaaggta gtcatgttga aatcggtgta gaattagcga aaaaatatgg
     4081 tgaaaatgaa acagttatta atgcaatcca ttctcaccat ggtgatgttg aacctacatc
     4141 tattatatct atccttgttg ctgcggcaga tgcattgtct gcggctcgtc caggtgcaag
     4201 aaaagaaaca ttagagaatt atattcgtcg attagaacgt ttagaaacgt tatcagaaag
     4261 ttatgatggt gtagaaaaag catttgcgat tcaggcaggt agagaaatcc gagtgattgt
     4321 atctcctgaa gaaattgatg atttaaaatc ttatcgattg gctagagata ttaaaaatca
     4381 gattgaagat gaattacaat atcctggtca tatcaaggtg acagttgttc gagagactag
     4441 agcagtagaa tatgcgaaat aatttttgtc tccctcacaa attagtgagg gagctttttt
     4501 cagttgtagt ctcaatctag ttagacagca ctttattggt aataactata taaaacagta
     4561 gttatttgaa agtaagacgg accttatatt aaataagaag ttattgcttt taataaaaat
     4621 gctttaggct tcataattac tatatttata ttatgtaaac ctataaagat gattgctttt
     4681 ctatccaata aaaaagaaga gaagatgtaa cacatcttct cttctgtaat attaattagg
     4741 atttatttct aagttgagtt attttaattg taaatctgtt ttctttaatt cttttataac
     4801 ttctgcagta tcataacaat ttgttgcaat tgttgaatat ctctctgcta aacgatatgc
     4861 attaatgtaa agctttaaac tttctttagc tatatcctct gcatcttcga attttgatgg
     4921 gttagacata accactaatt ctgcaaattt ttctggatca atattaatag acatgtattt
     4981 atttacaact cctatttatt ttgatgtctt aatactaaca tattgaagtt ttcagacaaa
     5041 gtaatgtctc tttataattg aagaaaaata attcaaagaa tttaatattt actttaaata
     5101 ttagaacgta tgaattaaac tagtatttat gagaggatga acaaaacatg agaataatgt
     5161 ttatagggga tatcgtaggt aaaattggac gagacgcaat tgaaacgtac atacctcaac
     5221 tgaagcaaaa gtataaacca acagttacaa ttgtaaatgc tgaaaatgca gcacatggta
     5281 aaggtttgac tgaaaaaata tataaacaat tactaagaaa tggtgtagat ttcatgacta
     5341 tgggtaatca cacatatggt caacgtgaaa tttatgattt tatagatgaa gcaaaacgac
     5401 tagtaagacc agcgaatttt ccggatgaag cgccgggaat tggtatgaga tttatacaaa
     5461 ttaatgatat taaacttgca gttattaatc tgcaaggaag agcgtttatg ccagatattg
     5521 atgatccttt taaaaaggca gatcaattag tcaaggaagc acaagaacaa actccgttta
     5581 tatttgttga ttttcatgca gaaacaactt ctgaaaagta tgcaatggga tggcatttag
     5641 atggtagagc tagcgctgtt gttggaacgc atacacacat tcaaactgca gatgaacgta
     5701 ttttaccaaa ggggacaggg tatataacgg atgttggtat gacaggcttt tatgacggca
     5761 ttttaggaat aaataaaaca gaggtaattg agcgttttat cactagtttg ccacaaagac
     5821 atgttgttcc aaatgaaggt agaagtgtat tatctggtgt tgttattgat ttggacaaag
     5881 aaggtaaaac aaagcacatc gaacgtatat tgataaatga tgaccatcca ttttcaacat
     5941 tttaaaatta cgtaagtaaa cattcgaatc ggaccctatc gtccattagt atgaatttaa
     6001 tatagtacca ctgtttacat agtaaatcgg tggttctttt tgttatcatt taatatgaaa
     6061 tatatccata ggaggcatat aactatgaaa ccacaattat cgtggaaagt tggcggtcaa
     6121 caaggcgaag gtattgaatc aactggggaa atcttcgcta cggctatgaa tagaaaagga
     6181 tattatttat atggatatag acatttttca agtcgtatca aaggtggaca tacgaataat
     6241 aaaattagag tttctacgac gcctgttcat gcaattagtg atgatttaga tattttgatt
     6301 gcatttgacc aagaaacaat tgatgttaac catcatgaaa tgagagaaga cagtatcatt
     6361 ttagctgatg ccaaggctaa acctgtgaaa ccagaaggat gtcatgcaca gcttattgaa
     6421 ttatctttta cagcaaccgc taaagaatta ggtacagcat taatgaaaaa catggttgca
     6481 ataggtgcta ctagcgcatt gatgaatttg aatacaaata catttgaaga acttattact
     6541 aatatgtttt ctaaaaaagg tgacaaggta gttgaagtca atatccaagc attaaacgaa
     6601 ggttatcaat taatgcaatc ccgcttacct gaaatcgacg gggactttga attagagtca
     6661 acagatgcac taccacatct atatatgatt ggtaacgatg ccattggatt aggtgcaatt
     6721 gctgcaggtt cacaatttat ggcggcatat cctattacac ctgcgtctga agttatggaa
     6781 tatatgattg ccaatatatc taaagtaaac ggagcggtta ttcaaacaga agatgaaatt
     6841 gctgctgtaa ctatggctat tggtgcaaat tatggtggag tcagagcgtt tacggctagt
     6901 gctggcccag gtttatcttt aatgatggaa gcaattggat tatctggtat gactgaaacg
     6961 ccattagtca ttattaatac ccaacgaggt ggaccttcta ctggattacc tacgaaacaa
     7021 gaacagtcag atttaatgca aatgatttat ggtacacatg gtgatattcc aaaaattgtt
     7081 gtagcaccaa ctgatgcaga agatgcattt tatttaacta tggaatcctt taatttagca
     7141 gaacaatatc aatgccctgt tatagtttta agtgatttgc aattatcttt aggtaaacaa
     7201 actgttgaaa aattagatta taatcgcatt gaaattaaac gtggtgaaat cattcaatct
     7261 gatattgaac gtgaagaaga tgataaaggt tatttcaagc gttatgcgtt aacatccaat
     7321 ggtgtttctc ctagacctat ccccggtgtt aaaggaggta ttcatcatat aactggtgtg
     7381 gaacacaatg aagaaggtaa acctagtgaa tctgcgtcaa atagacaaca acaaatggaa
     7441 aaacgaatgc gtaaaattga gcagttacta attgaatcgc cagtagaagc taacttacaa
     7501 catgaggatg cagatattct ttatatcggt tttatttcta caaaaggtgc aattcaagaa
     7561 ggtagtaacc gtttgaatca acaaggcata aaagttaaca ctatacaaat tagacaattg
     7621 catccattcc caacaagcgt tattcaagat gcagttaata aagcgaagaa agtcgttgta
     7681 gtggaacaca attatcaagg acaattggct agtattataa aaatgaatgt caatattcat
     7741 gataagattg aaaattatac aaagtatgat gggacacctt tcctaccaca tgaaatcgaa
     7801 gaaaaaggta aaataattgc tactgaaata aaggagatgg tatagatggc gacatttaaa
     7861 gattttagaa ataatgttaa gcctaactgg tgccctggat gtggcgattt ctcagtacaa
     7921 gctgcaattc aaaaagcagc cgcaaatata gggttagaac ctgaagaagt agctatcatc
     7981 accggtatag gatgttctgg ccgtctttca ggatatatta attcttatgg cgttcattct
     8041 attcacggac gtgcattacc tttagctcaa ggtgtaaaaa tggcgaataa agatttaact
     8101 gttattgcat ctggaggaga tggtgatggt tatgctatag gtatggggca tacaatccat
     8161 gctttaagaa gaaatatgaa catgacgtat atagtcatgg ataatcaaat ttatggtttg
     8221 acaaagggac aaacatcgcc gtcatcagca gtaggatttg ttactaaaac aacgccaaaa
     8281 ggtaatatag aaaaaaatgt tgcgccttta gaattagcat tatcatctgg tgccacattt
     8341 gtagcccaag gtttttcaag tgatattaaa ggattaacaa aactaattga agatgcaatt
     8401 aatcatgatg ggttttcatt tgttaatgtc ttttcaccat gtgtgactta taataaaatt
     8461 aacacatacg attggtttaa agaacattta acaagtgttg atgacattga aaactatgat
     8521 tctacagata aacaattagc gactaaaact attattgaac atgaatcttt agtaactggt
     8581 attgtttatc aagataaaga aacaccatca tatgaatctc aaattaaaga attagatgat
     8641 acaccacttg ctaaaagaga tatcaaaatt actgaagaca cgttcaatgc attaactgaa
     8701 caatttattt aataattaaa actgagtcgt ataaatgtat ttataacaga tccatttatg
     8761 ctactcagtt tttttactat tacaaaaaat aaaggagttt ttaaaaatga aagacacatt
     8821 aatgagtata caaataattc ctaaaacacc aaacaatgac aatgttatac cttacgtaga
     8881 cgaggcgatt aaaataattg acgaatctgg tttgcatttt agagtaggtc cgttagaaac
     8941 gacagtacaa ggaaatatga atgaatgttt aattttaata caatcattaa atgaacgaat
     9001 ggtggaactt gaatgtccaa gtattattag ccaagttaag ttttatcatg tgccagatgg
     9061 catcactatt gaaactttaa ctgaaaaata tgatgaataa cattaaaagt gaagtaaact
     9121 ggatttgaat tggcttgtta gagatgacgt ataactttaa ctgcttttgc actttatagt
     9181 taaatttaat ataattatta aatgatacgg gcaaatagaa aggattttgt aaagtgaacg
     9241 aagaacaaag aaaagcaagt tctgtagatg ttttagctga gagagataag aaagcagaaa
     9301 aagattatag taaatatttt gaacatgttt atcaaccgcc taatttaaaa gaagcgaaaa
     9361 aaagaggtaa acaagaagtt cgttataata gagatttcca aattgatgaa aaatatcgcg
     9421 gtatggggaa cgagcgtaca tttttaatta aaacatatgg atgtcaaatg aatgcacatg
     9481 acactgaggt cattgctggt atacttgaag cattaggcta tcaagcaacg actgatatta
     9541 acactgcaga tgttatttta attaatacat gtgcgattag agaaaatgcc gagaacaaag
     9601 tgtttagtga aataggtaat ttgaagcatt tgaagaaaga acgacctgat attttaatcg
     9661 gagtttgtgg ttgtatgtca caagaagagt cagtagtgaa taaaatttta aaatcgtatc
     9721 aaaatgtaga tatgatattt ggtacacata atattcatca tttaccagaa attttagaag
     9781 aagcatactt atctaaagca atggttgttg aagtatggtc taaagaagga gacgttattg
     9841 aaaatcttcc aaaagtccgt gaaggcaaca ttaaagcatg ggtcaatatt atgtatggtt
     9901 gtgataagtt ttgtacatat tgtattgttc catttacaag aggtaaagaa cgaagccgta
     9961 gacctgaaga cattatagat gaagtacgtg aacttgctcg tgaaggttac aaagaaataa
    10021 cgcttttagg tcaaaatgta aattcatacg gtaaagattt acaggatata gaatatgact
    10081 taggagatct tttacaagca atttctaaaa tagcgattcc aagagttcgt ttcacaacaa
    10141 gtcatccttg ggacttcaca gatcacatga ttgatgttat ttcagagggc ggtaatatcg
    10201 ttcctcatat ccacttgcca gttcaatctg gaaataatgc agtattaaaa ataatgggta
    10261 gaaaatatac acgagaaagt tatttggatt tagtaaaacg aatcaaagat agaattccaa
    10321 atgtagcatt aactacagat attattgtag gttatccaaa tgaatcagag gaacaatttg
    10381 aagaaacttt aactttatat gatgaagttg gttttgaaca tgcatatacg tatttgtatt
    10441 cacaacgtga tggtacgcct gctgctaaaa tgaaagataa tgtaccttta gatgtcaaaa
    10501 aggaacgatt gcaacgtttg aataaaaaag ttggtcatta ttcacaaata gctatgagta
    10561 agtacgaagg acaaactgta acagtacttt gtgaaggtag tagtaaaaaa gatgatcagg
    10621 ttcttgctgg ctacaccgat aaaaataagt tagttaattt taaagcgcct aaagaaatga
    10681 ttggtaaact agtggaagta cgaatagatg aagctaaaca gtattcatta aatggcagtt
    10741 ttgtaaagca agtagagccg gaaatggtga ttcaataaat gtataataaa gatgacgtgt
    10801 tgaaacaagc ggataatatt gcaaataaaa ttaaaaattt ggatactatc aaaacatatc
    10861 aacaaattga agcacagatt catcagaacc aaacgataaa gactaaaatg gatatgttaa
    10921 aaaagcatca aaaacaagca gtaaactttc aaaattacgg gaaacaaaat gcgctagaac
    10981 agtcggaaca taccattcaa agtatagaag cagaaataaa tacattgccc atagttgaac
    11041 agtttcaaac ttcacaatat gaagcgaatc aattattgaa aatgtttgta tcaacaatgg
    11101 aaacacgttt aaatgaccat aataaagcca aacatagtga ttaattacaa acaaaaagga
    11161 gaacaatcat atgaaatcaa gaaaactggc tataactgca cttttaattg caataaatgt
    11221 tgtattaagc agtattatca tcattcctct aggaccagtt aaggcagcac cagtacagca
    11281 ttttgtaaat gtattaagtg cggtcatagt aggtccttgg tatggattag ctcaagcgct
    11341 tatatcatca attttaagag ttctttttgg aactggtaca gcttttgcat ttccgggtag
    11401 tatgattgga gttttattgg ctagtatgtt ttacatatat cgtaaacata tattcatggc
    11461 cgcggtcggt gaagtacttg gaactggtgt catcggaagt ttaatttgta taccattagc
    11521 atatttcctt gggcttcaag acttcttcat taaaccgtta atgattacgt tcatagtctc
    11581 aagtgctatc ggatctatta taagttattt cttattaatt actctaaaaa aacgtggtat
    11641 tcttaaaagg tttataaaat aattttatga tatatgattt caaacaaagt cattgttcat
    11701 tttaatattg aacgccctta cttaattaaa tgtcttgaat gttagaattt taatataatt
    11761 ctaaacatgc tattaacaca ttttattagg tttgaggcgt tttctaatac atttaagata
    11821 cttcgttatt atatggtatg aataggtttg taaaagtaag tatgttaaaa tgtataagtt
    11881 aaataattaa taattagaaa gcttacaaac gaatatattg taaagacaaa ttttaaaaag
    11941 agacaagggt tgtgaagaaa taatatgtct aatgttacac caatgatgca gcaatattta
    12001 aaaataaaat cagaatacca agattgctta ttatttttta gactaggtga tttctatgaa
    12061 atgttttatg aagatgccaa ggaggcatca cgtgtacttg aaattacttt aactaaaaga
    12121 gatgctaaaa aagaaaatcc aattccgatg tgtggtgttc cgtatcattc tgcagatagt
    12181 tatatagata cacttgttaa taatggatat aaagtagcta tttgtgaaca gatggaagat
    12241 ccgaaacaaa cgaaaggtat ggttagacgt gaggtagtaa gaattgtgac tccaggaact
    12301 gtgatggagc aaggaggtgt agatgataaa caaaataact atattttaag ttttgttatg
    12361 aatcaacctg aaattgcgct tagttactgt gatgtttcta ctggcgaatt aaaggttaca
    12421 cattttaatg atgaagcgac tttattaaat gaaattacga cgataaaccc taacgaagtt
    12481 gttatcaatg acaatatttc cgatcattta aaaagacaaa ttaatatggt gacagaaaca
    12541 ataacagtca gggaaacgtt atcatctgaa atttatagtg tgaatcaaac tgaacataaa
    12601 ttaatgtatc aagcgacaca attattgcta gattatattc atcatacaca aaaacgtgat
    12661 ttatcgcata tcgaggatgt tgttcaatat gcagctatag attatatgaa aatggatttt
    12721 tatgctaaga gaaaccttga gttaacggaa agcattcgat taaaatccaa aaaaggaacg
    12781 ctactttggt tgatggacga aacgaaaaca ccaatgggag cacgccgatt aaaacaatgg
    12841 atagatagac cactaataag taaagaacaa attgaagcac gattagatat cgttgatgaa
    12901 tttagtgctc atttcataga aagagacacc ttaagaacat atcttaatca agtgtatgat
    12961 attgaacgtc ttgttgggcg tgttagttac ggaaatgtta atgcgagaga tttaattcaa
    13021 cttaaacatt ccatttctga aataccgaac attaaagcat tactaaattc tatgaatcag
    13081 gatactcttg tacatgttaa tcaactagag ccacttgatg atttacttga tatattagaa
    13141 cagagtttag tagaagaacc accaatttca gttaaagatg gtggactatt caaagttggt
    13201 tttaatatgc aattagatga atatcttgaa gcttcaaaaa acggaaaaac atggttagca
    13261 gaactacaag caaaagaaag acaacgtaca ggaataaaat cattgaaaat aagctttaat
    13321 aaagtgtttg gttattttat agaaataaca cgtgccaact tgcaaaattt tgaaccaagt
    13381 gaatttggtt atatgaggaa gcaaacgcta tcgaatgcgg aacgatttat aactgatgaa
    13441 cttaaagaaa aagaagatat cattttaggt gcggaagaca aagccattga attagaatat
    13501 ctattatttg ttcagctacg tgaagaagtt aaaaaatata ctgaacgttt acaacaacaa
    13561 gctaaaatta tttcagagtt agattgttta cagagctttg cagaaattgc tcaaaaatat
    13621 aattatacta ggccttcatt tagtgaaaat aaaacattag aattagtgga atctaggcac
    13681 ccagtagtgg aaagagtaat ggattataat gactatgtgc ctaataattg tcgattagat
    13741 aatgaaacat ttatatattt aattacaggt ccgaatatgt ctggtaaatc gacgtatatg
    13801 agacaagttg ccataattag cataatggcc caaatgggag cttatgtccc ttgtaaagag
    13861 gctgtgttac ctatatttga tcaaatattt actagaatag gtgcggcaga tgatttggtt
    13921 tcaggtaaga gtacgtttat ggtagaaatg ctagaagcac aaaaggcatt aacttatgca
    13981 acagaggata gtttgattat tttcgatgaa attggacgtg gtacttcaac gtatgacggt
    14041 ttagctttag cgcaggcaat gatagagtat gtagctgaaa catcacatgc taaaacgtta
    14101 ttttcaacac attatcatga attgacaaca ttagatcaag cattaccaag tctaaaaaat
    14161 gttcacgtcg ctgctaatga atataaaggt gaacttatat tcttgcataa agtcaaagat
    14221 ggtgcagttg acgatagtta tggtattcaa gttgcgaaat tagctgattt acctgaaaaa
    14281 gttattagca gagcacaagt gatcctaagc gagtttgaag cgtctgctga taaaaaatca
    14341 tcgatatcaa atttaaaaat gatcgaaaat gaacctgaaa ttaatcaaga aaattcaaac
    14401 ttaagtgttg aagaaacaac tgatacttta tctcaaaaag actttgaaca agcatcattt
    14461 gatttgtttg aaaatgatca agaaagcgag attgaactac aaattaaaaa tttgaattta
    14521 tctaatatga caccaattga ggcattggtg aagttaagtg aattacaaaa tcaattaaaa
    14581 tagaggtgtt gcaaaatggg gaaaattaaa gaactccaaa cctcattagc aaataaaatc
    14641 gcagcaggtg aagtagttga aagaccgagt tctgttgtga aagaactgtt ggaaaatgct
    14701 atagatgcag gcgctacaga aataagcatt gaagtagagg aatctggcgt ccaatctatt
    14761 cgcgtagtcg ataatggaag cggaattgaa gcggaagact taggattagt atttcataga
    14821 catgcgacta gtaaattaga tcaagacgaa gatttatttc atattaggac attaggattc
    14881 cgtggtgaag cactagccag tatttcatca gttgctaaag taacattgaa gacttgcacg
    14941 gataatgcta atggaaatga aatatatgta gaaaatggtg aaatattaaa tcataagcct
    15001 gcaaaagcga aaaaaggaac agatatactt gtagaatcat tgttttataa tacaccagca
    15061 cgtttaaaat atattaaaag tttatacact gaactaggta aaataacaga tattgtcaac
    15121 agaatggcaa tgagtcatcc ggacattcga atagcactca tttcagatgg caaaacaatg
    15181 ttaagtacaa atggttcagg acgaactaat gaagtgatgg cagagattta tgggatgaaa
    15241 gttgcacgag atttagtaca tatatctgga gatacaagtg attatcacat tgaaggtttt
    15301 gttgcaaagc ctgaacattc tagaagtaat aagcactata tttctatttt tattaatgga
    15361 cgatacatta aaaactttat gctaaataaa gcgattttag aaggctatca tacactctta
    15421 acaataggta ggttcccgat ttgttatatt aatattgaaa tggatccaat cttagtagac
    15481 gtaaatgttc atccaacaaa actagaagtg cgtttatcaa aagaagagca actatatcaa
    15541 ttgatagtga gcaaaataca agaagcattt aaagaccgta tattaattcc taaaaataac
    15601 ttggattatg tgccgaaaaa aaataaagtg ttacattcat tcgaacaaca aaaaatcgaa
    15661 tttgaacaaa gacaaaacac agagaataac caagagaaga cgttttcatc tgaagaaagt
    15721 aacagtaagc catttatggc agaaaatcaa aacgatgaga tagttataaa agaagattca
    15781 tataatccgt tcgtaacgaa aacatctgaa agtttaatag ctgatgatga atcttctggt
    15841 tataataata cacgtgaaaa agatgaagac tacttcaaaa aacaacaaga aattttacaa
    15901 gaaatggatc aaacatttga ttcaaatgac gatgcatctg tgcaaaatta tgagaataaa
    15961 gcgtctgatg attattatga tgtgaacgat attaaaggaa caaaaagtaa agacccaaaa
    16021 cgaagaattc catatatgga aattgttggc caagtacatg gaacgtatat tattgctcaa
    16081 aatgaatttg gcatgtacat gattgaccag catgcagctc aagaaagaat aaaatatgaa
    16141 tattttcgag ataaaatagg tgaagttacc aatgaagtac aagatttatt aatcccgtta
    16201 acatttcatt tttcaaaaga tgaacaatta gtcattgatc aatataaaaa tgagcttcaa
    16261 caagtaggta tcatgttaga acattttggt ggtcatgatt atattgtaag tagctatcca
    16321 gtttggttcc ctaaagatga agtagaagaa attattaaag atatgattga gctaattttg
    16381 gaagagaaaa aagtagatat caaaaaatta cgtgaagatg tagcaatcat gatgtcatgt
    16441 aaaaaatcta ttaaagcgaa tcattattta caaaaacatg aaatgtctga tttaattgat
    16501 caattaagag aagcggaaga tccatttaca tgtccacatg gtcgtccaat tatcattaat
    16561 ttttcaaaat acgaattaga aaaattattt aagcgtgtga tgtagagagg atgaatcaag
    16621 tgaataacaa catattgcct gccataagaa acattaaaga tttagagaaa ctgattaaaa
    16681 cagattataa aatgtgtgtg cttctagata tgcatatagg acatattaaa agtattatgg
    16741 aattgctgaa gcaaaatcat atagagtgtt ttattcatat agatttgata aaaggtttaa
    16801 gtcacgatga atttgcaagt gaatttatta ttcagcaata caagccaaaa ggtattgtat
    16861 cgactaaatc taaagtaata aaaaaagcga aatcattaaa tactttaacg atttttagag
    16921 tgtttattat tgatagtcaa gcattgaaac gcagtataga tttgataaaa aaagttgaac
    16981 ctgattttgt agaagtactt ccaggtgttg cgagtaaagc gattcatcat attcagaaag
    17041 aaacaaacac acaagtcatt gcaggtggcc taattaatac aatagatgaa gtcaatgaag
    17101 ctgttaaaaa tggagcgaaa tatgtaacaa ctagttatga taaactctgg tgaatcataa
    17161 gtctgcaaaa attagatttt tcactagatt tagtcatata acatattaaa aaagccgtgt
    17221 tcatatggga tatgtaataa ggaatttaag gtatcataca aagaataatt aaataaaata
    17281 attagcacct ctaaaacgat taaaatcatt aaagttatag aggtgtttat ttgtaaaaat
    17341 gcaaatagtc ataaaaaata tggctgaaga atgtcattta agcaactgaa cgtcatagac
    17401 tatttagtgc gtattgatat ttctagtttt caaattaaac tacttttata aagacttgaa
    17461 aaattaaatt tgacaaaatt tttacaaaaa ccattgacaa cgctttcatc tcgatagtat
    17521 cataacaaat ataataaaag ttaatacata gaatagagac gggagatttc tacgagccaa
    17581 actgctagtg taggaatctc tttgtctttt tgggaggaca tttaatatga atgtatattt
    17641 agcagaattc ctaggaactg caatcttaat cctttttggt ggtggcgttt gtgccaatgt
    17701 caatttaaag agaagtgctg cgaatggtgc tgattggatt gtcatcacag ctggatgggg
    17761 attagcggtt acaatgggtg tgtatgctgt cggtcaattc tcaggtgcac atttaaaccc
    17821 agcggtgtct ttagctcttg cattagacgg aagttttgat tggtcattag ttcctggtta
    17881 tattgttgct caaatgttag gtgcaattgt cggagcaacg attgtatggt taatgtactt
    17941 gccacattgg aaagcgacag aagaagctgg cgcgaaatta ggtgtttttt ctacagcacc
    18001 ggctattaag aattactttg ccaacttttt aagtgagatt atcggaacaa tggcattaac
    18061 tttaggtatt ttatttatcg gtgtaaacaa aattgccgat ggtttaaatc ctttaattgt
    18121 cggagcatta attgttgcaa tcggattaag tttaggcggt gctactggtt atgcaatcaa
    18181 cccagcacgt gatttaggtc cgagaattgc acatgcgatt ttaccaatag ctggtaaagg
    18241 tggttcaaat tggtcatatg caatcgttcc tatcttagga ccaattgccg gtggtttatt
    18301 aggtgcggta gtatacgctg tattttataa acatacattt aatattggtt gtgcaattgc
    18361 aattgttgta gttattatta ctttgatttt aggttacatt ttaaataaat catcaaaaaa
    18421 aggtgatatc gaatcaattt actaaaataa aaagaaacgt aaatagcata atttaacatg
    18481 tttgattcat ggattatgct attttttcgc caaaatttaa cagattttgt acaatgggtt
    18541 agcgattatt ttttaataaa ggagatacta caaatggaaa aatatatttt atctatagac
    18601 caaggaacaa caagctcaag agcgatttta ttcaatcaaa aaggggaaat tgcaggggta
    18661 gcacaacgtg agtttaagca atattttcca caatcaggtt gggttgaaca tgatgcaaat
    18721 gaaatttgga catctgtgtt agctgtaatg acggaagtaa ttaatgaaaa tgatgttaga
    18781 gctgatcaaa ttgcaggtat cggtattaca aaccaacgcg aaacaacggt tgtttgggac
    18841 aaacatactg gccgcccaat ttatcacgca attgtttggc aatcacgtca aacacaatca
    18901 atttgttcag aattaaaaca acaaggatat gaacaaacat ttagagataa gacaggattg
    18961 cttttagatc cgtattttgc aggtacaaaa gttaaatgga ttctagacaa tgttgaaggt
    19021 gcacgagaaa aagcagaaaa tggcgatcta ttatttggaa cgattgatac ttggttagta
    19081 tggaaattat caggaaaagc tgcgcatatt actgattatt caaatgcgag tcgtacttta
    19141 atgtttaata tccatgattt agaatgggac gatgagttat tagaactact tacagtacct
    19201 aaaaatatgt tgccagaagt taaaccttca agtgaagtat atggtaagac aattgattac
    19261 cacttctatg gtcaagaagt accaatcgct ggtgtagctg gtgatcaaca agcagcatta
    19321 tttggacaag cttgcttcga acgtggtgac gtgaaaaaca catatggaac tggtggcttc
    19381 atgttaatga atacaggtga caaagcggtt aaatctgaaa gtggtttatt aacaacaatt
    19441 gcttatggta ttgatggaaa agtaaattat gcgcttgaag gctcaatctt tgtttcgggt
    19501 tcagcaatcc aatggttacg tgatggatta agaatgatta attcagcacc acaatcagaa
    19561 agttatgcga cacgagttga ctctactgag ggtgtttatg ttgttccagc ttttgtaggt
    19621 ttaggaacac catattggga ttctgaagca cgtggtgcga ttttcggttt aacacgtgga
    19681 actgaaaaag agcactttat ccgtgcaact ttagaatcat tatgttacca aactcgtgac
    19741 gttatggaag caatgtcaaa agactctggt attgatgtcc aaagtttacg tgtcgatggt
    19801 ggtgcagtta aaaataactt tattatgcag ttccaagcag acattgttaa tacttctgtt
    19861 gaaagacctg aaattcaaga aactacagct ttaggtgctg catatttagc aggtttagca
    19921 gttggattct gggagagtaa agatgatatc gctaaaaact ggaaattaga agaaaaattc
    19981 gatccgaaaa tggatgaatg cgaaagagaa aaattatata gaggttggaa aaaagctgtt
    20041 gaagcaacac aagtttttaa aacagaataa acatgtagat tagacttttg tataaacatt
    20101 gtgatacaat caatttaagt taatatttga atcgagaaac gagagatttg ttcgaacatg
    20161 tacaattgaa ggattgttta tgtgggacaa gtctctcgtt tttacatttt tttaggaggc
    20221 gttttggaat ggcattgtct acttttaaga gagaatatat taaaaagaat ttaagaaatg
    20281 atgaatatga tttagtaatt attggtggcg gtattacagg tgcaggtatt gcactagacg
    20341 cgagtgaaag aggaatgaaa gttgcattag ttgaaatgca agactttgca caaggaacaa
    20401 gctcaagatc tacaaaatta gtccatggtg gtttacgtta cttaaaacaa ttccaaattg
    20461 gagtagttgc cgaaactggt aaagaacgtg cgattgttta tgaaaatggg cctcatgtta
    20521 cgactccaga gtggatgctt ttaccaatgc ataaaggtgg aacatttggt aaattctcaa
    20581 catcaattgg tttaggaatg tatgatcgtt tagcaggtgt taaaaagtct gaacgtaaaa
    20641 aaatgttatc taaaaaagaa actttagcta aagaaccatt agttaaaaaa gaaggtctaa
    20701 aaggcggcgg ttactatgtt gaatatcgta ctgacgatgc gcgtttaact attgaagtta
    20761 tgaagcgtgc tgctgaaaaa ggcgcagaaa ttatcaacta tactaagtca gaacacttca
    20821 cttatgataa aaatcaacaa gtaaatggtg ttaaagttat agataaatta actaatgaaa
    20881 attatacaat taaggctaaa aaagtggtta atgcagcagg tccatgggtt gatgatgtta
    20941 gaagtggtga ttatgcacgc aataataaaa aattacgttt aactaaaggt gtacatgttg
    21001 ttattgatca atcaaaattc ccattaggtc aagcagtata ctttgatact gaaaaagatg
    21061 gaagaatgat ttttgcaatc ccgcgtgaag gaaaagcgta tgtaggtact acagatacat
    21121 tctatgacaa tatcaaatct tcaccattaa ctacacaaga agacagagac tatttaatcg
    21181 atgctattaa ttacatgttc cctagtgtta atgttacaga tgaagatatt gaatcaacat
    21241 gggcaggaat tagaccatta atttacgaag aaggcaaaga cccttctgaa atctctcgta
    21301 aggatgaaat ttgggaaggt aaatcaggtt tattaactat tgcaggtggt aaattaacag
    21361 gctatcgtca catggctcaa gacattgttg atttagtatc taaacgcttg aaaaaagact
    21421 acggtttaac atttagtcca tgtaatacaa aaggtctggc aatttcaggt ggcgatgtag
    21481 gtggtagtaa gaactttgat gcgtttgtag agcaaaaagt agatgtagct aaaggattcg
    21541 gcattgatga agatgttgca agacgtttag catctaaata tggttcaaat gttgatgaat
    21601 tgttcaacat tgcgcaaaca tctcaatacc atgatagcaa gttaccatta gaaatttatg
    21661 tagaacttgt ttatagtatt caacaagaaa tggtatacaa acctaacgat ttcttagttc
    21721 gtcgttctgg taaaatgtac ttcaatatta aagatgtatt agattataaa gatagtatca
    21781 tagatattat ggctgatatg ttagactact ctccagctca aattgaggct tatactgaag
    21841 aagttgagca agcaattaaa gaagcgcaac atggaaataa tcaaccagca gttaaagaat
    21901 aattaatttg tacaatcata aactggtgtc ctgttttaag ggcatcagtt ttttatatga
    21961 gatacattag tcaattgaaa ctaggcatca ctaaatgtat gataataata aaagcgaata
    22021 taaaaacgtt gttattaaag gtgtgagatg atgactgaaa aacaatttta attaactgta
    22081 caagataata cgaatattga agttaaagtg aattttacag atgtagattc aaaaggaatt
    22141 attcatatat ttcatggtat ggctgaacat atggaacgtt acgataaatt agcacatgca
    22201 ctttcaaagc atggcttcga tgtgatacgt cataatcatc gaggacatgg tattaatatt
    22261 gatgaatcaa caagagggca ttacgatgat atgaaacgag ttatcggtga tgcctttgaa
    22321 gtagcgcaaa cagtgagagg caatgttgat aaaccttaca ttataatcgg acattcaatg
    22381 gggtctgtta tagctagatt gtttgtagaa acatatccgc aatatgttga tggtctaatt
    22441 ttaagtggta ctggtatgta tccgttatgg aaagggttac caaccgttaa ggtgttacaa
    22501 ctgattgcaa aaatttatgg tgctgagaaa cgggttgaat gggttaacca gttagtatca
    22561 aatagtttta ataaaaaaat acgtccttta cgtacacaaa gtgattggat ttctagtaat
    22621 ccaactgaag tagacaactt tattaaagat ccatatagtg gatttaatgt gtcaaatcaa
    22681 ttattatatc aaacagccta ttatatgcta catacatcac aattaaaaaa tataaaagtg
    22741 ttaaatcatg ccatgcctat attattagtt tcaggatatg acgatccttt aggtgattat
    22801 ggtaaaggga ttttaaaatt ggcgaatata tatagaaaag tcggcattaa aaatgttaaa
    22861 gttaatcttt atcatcataa acgtcatgaa gtgttatttg aaaaagatca tgacaaaatt
    22921 tgggaagact tgtttaaatg gttgaatcaa ttttataaaa aataaagaaa gtggaattaa
    22981 atatgaataa aaataagcct tttattgtag taattgtggg gccaactgct tcaggtaaaa
    23041 cagagcttag catcgaactc gcgaagcgta tcaatggtga aatcataagc ggtgactcta
    23101 tgcaagtcta caagcatatg aatattggaa ctgcaaaagt aacacctgaa gaaatggatg
    23161 gtattccaca tcatttaatt gatatcttga atcctgatga tacattttca gcatatgaat
    23221 tcaagcgatt agcagaagat ttaattactg atataacgaa tagaggtaaa gttccaatca
    23281 tagcaggtgg aacaggctta tacattcaat cattaatata taattatgaa ttagaagatg
    23341 aaacagttac acctgcacaa ttatccgtag ttaaacaaaa gttatctgca ttagaacatt
    23401 tagataatca gcaactacac gaatatttag ctcaatttga cgaggtttct gcaaaaaata
    23461 ttcaccctaa taaccgtcaa agagtgttgc gcgctattga atattattta aaaacaaaaa
    23521 aacttttgag taatcgtaag aaagtgcaac aatttactga aaattatgat acattattaa
    23581 tagggattga aatgtcgcgt aaaacattat attcaagaat aaataaacgt gttgatatta
    23641 tgttggatca cggattattt agagaagtgc aacaacttgt tgaacaaggc tatgaatctt
    23701 gccaaagtat gcaagctatt ggatataaag aattaatacc tgtgattaac ggacaaatga
    23761 tttatgaaga tgctgtcaat gatttaaagc aacattcacg ccaatatgca aaacgacaaa
    23821 tgacatggtt caagaataaa atgagtgttc attggttaga taaagaaaat atgtcacttc
    23881 aaatgatgtt agatgagatt acaacccaga ttaagtaaaa ggagtccgac agatgattgc
    23941 aaacgaaaac atccaagaca aagcactaga gaattttaaa gcaaaccaaa ctgaagtaac
    24001 tgtattcttt ctaaacggtt tccaaatgaa aggtgttatt gaagaatacg acaagtatgt
    24061 cgtaagctta aattctcaag gcaaacaaca cttgatttac aaacatgcga tcagcactta
    24121 tacagtagaa actgaaggtc aagaatctac tgaaagtgaa gaataagttg taatcatatg
    24181 ggcacgattt aatgactcgt gtacataacg tttgaagtat gataaataga tatagaaata
    24241 aagtcatatg tgacatcaat taaatgatgt tcaaatgaca agatacaata gaggaatgtt
    24301 tgtaataaaa acgcttcata taaaggccga gtcaatatat gatacgactt tatatgaagc
    24361 gttttatttg ctatgagcta gtatatttta taataacttt tctatttctc tttcgatttg
    24421 aacaggcttt ttttgaggtg caaatcgttt aacaacgttg ccttcacgat ccactaaaaa
    24481 cttagtgaaa ttccatttga ttttctcatt aaagaatccg tgttgtgccg cagtcaaata
    24541 tctaaataat ggtaattgat gttccccttt tacgtctatt ttttgatgca tagggaaggt
    24601 aacaccatag tttaatttac agttttgagc tgcttcttcg cctgatccag gttcttggcc
    24661 accaaattga ttacaaggga aacctagaat tacaaaccct tgatctttgt atttctcgta
    24721 taatgattgc aaaccttcaa attgtgaagt aaagccacat tcgctagctg tattgacaat
    24781 tagcataacg tcacccatat atgcatctaa tttgtaagta acacctttat ttgtttctac
    24841 tacaaaatca taaattgtct ccattgaatc atcctttcga tttacttaaa atgtaccata
    24901 aaatcgtgta atagtcttta ctaaaactct atgatagaat actttgagta ggattttatt
    24961 aaggagatgt ataacatggc tcagcaacaa attcatgata ctaaaaataa actagaaaaa
    25021 gctgtcttag tcggtgtaca tgctcaagat gataagcaat ttaattttga gtctacaatg
    25081 gaggaattat catctttatc agagacttgc caacttgaag tgttgggtca aattactcaa
    25141 aacagagatc gtgtagatcg caaatattat gttggtaaag gtaaaattga agaaattcaa
    25201 gcatttattg agttcaaaga tattgatgta gtcatcacaa atgatgaatt aacgactgca
    25261 caatccaaat cactaaatga agctttaggt gtaaaaatta ttgatagaac tcagttgatt
    25321 cttgaaatat ttgcattaag agcaagaagt aaagaaggta aattgcaagt agagctagca
    25381 caacttgatt atttattacc tagattgcaa ggccagggta aaagtctttc tcgtttaggt
    25441 ggcggtattg gaactagagg ccctggtgaa acgaagttag agatggatcg cagacatatt
    25501 cgaactcgta tgaatgaaat taaacatcaa ttgcgaacgg tagaagaaca tcgcgaaaga
    25561 tatcgaaata aaagaaatca aaatcaggtg tttcaagtag ctttagttgg ttatacaaat
    25621 gctggtaaat catcatggtt taatgtttta gcaaatgaag agacatatga aaaagatcaa
    25681 ttatttgcaa cgttagatcc taaaacacga caaattcaaa taaatgatgg atttaattta
    25741 attatttcag atactgttgg ttttatacag aaactaccta cgacgttaat tgcagctttt
    25801 aaatcaactt tagaagaggc taaaggtgca gatttattag tacatgtcgt agatagtagc
    25861 catcctgaat accgtacgca gtatgacaca gttaatgatt taatcaaaca attagatatg
    25921 aaccatattt ctcaaatagt tatttttaat aaaaaggatt tatgtgatca tgcatcaaat
    25981 cgtccagcaa gtgatttgcc taatgttttt gtttcttcta aaaatgatgg tgataaatta
    26041 cttgttaaga cgttatttat tgatgaaatc aaaaggcaat taacttatta tgatgaggca
    26101 attgcgacga ataatgcaga tcgattatat tttctaaaac aacatacttt agtgactgaa
    26161 cttaaatatg atgaaattga aaatgtttat cgtataaaag gatttaaaaa ataataaaag
    26221 gacgaaattc aaatgaaaga tataagtaag atagtagctg acgtcgaatc aacattagca
    26281 ccatatttta aagaaattga agaaactgca tatattaatc aagaaaaagt attaaatgcg
    26341 tttcatcatg tcaaagcaac cgaaagtgat ctacaaggat caacaggata cgggtatgat
    26401 gattttggac gtgatcattt agaagaaata tatgcgcagg catttaaagc agaagatgca
    26461 attgttcgtc cgcaaattat ttcaggtacg catgcgatta ctattgcatt acaaagttta
    26521 ttaaaacatg gtgatgaatt aatttatata acgggaagtc catatgacac tttacttgaa
    26581 gtcattggtg taaacggaaa tggtattgaa agtttaatgg agcacggcgt atcgtataaa
    26641 gatattgcac ttaaagaagg taagatcgat attgaaagtg tgttagatgg ggtttccgag
    26701 cgcaccaaag taatagcgat tcaacgttcg aaaggctatg atcaaagacc ttcaattcct
    26761 ctagatgaaa ttgaagaggt gattactagg ttgaaagaag ttcatcctaa tattttaata
    26821 tttgtggata actgttatgg ggaatttgtt gaaagacgtg aacctataga atgtggtgcc
    26881 gatttaatag caggatcatt aattaaaaac cctggcggtg gtttagctaa gattggtgga
    26941 tacattgctg gtagaaaaga tttaattgaa cgatgtggtt atagattgac agcacctggt
    27001 attggtaaag aagcgggtgc ttcattaaat gcattgcttg aaatgtatca aggtttcttt
    27061 ttagcaccac acgttgtcag tcagagtctt aaaggggcat tgtttactag tttattttta
    27121 gaaaaaatga atatgaacac aacgccgaag tactatgaaa aacgaactga tttaattcaa
    27181 acagttaaat ttaaaacgaa agaacaaatg atttcatttt gtcaaagtat tcaacacgca
    27241 tccccaatta atgcacattt tagtccagaa ccgagttata tgcctggtta cgaagatgat
    27301 gttattatgg cagctggtac gtttattcaa ggttcatcga ttgaattatc tgcagatgga
    27361 cctattcgtc ctccttatga agcatatgtt caaggaggat taacatatga acacgttaaa
    27421 attgctgtga caagagctgt taagcagttg aaagaacaag gacttataga atagattaaa
    27481 tttcacccta aatgataaag tgttttgggt gaaatttttt tgcgaagatt tatcagatta
    27541 tttttaaaaa ttgaaaaaat attttagctg taggtcgttt tatagcgttt tagaggtcga
    27601 aattgcagtt atatcaatgt tttgagcttt atgttagaaa acctaacata tttttgaaat
    27661 cctaaaaaaa ttatgataag ttattaacaa gttcaaaagt agaggagagg aacaatgata
    27721 tcgaatgatg caatcagacg aaatatggct gtcttctcta tgagtgtagt aagtaagtta
    27781 acggatttaa cgccaaggca aatacgttac tatgaaacac atgaactcat caaacctgaa
    27841 agaacagaag gtcaaaaacg tctgttctca ctcaatgatt tggaaagatt actagaaatt
    27901 aaatcattat tagaaaaagg atttaatatc aaagggatta agcaaatcat ttatgactca
    27961 caagagcatt taacaactga tgaacaagag ataagaaaaa agatgattgt agatgccacg
    28021 caaaagccta ttggagaaac tttgccaata aatcgtggtg atttatcccg atttattaaa
    28081 taaaatttgg aggattttaa aatgccaaaa cgtactttca ctaaagacga cattcgtaaa
    28141 tttgcagaag aggaaaatgt aagatattta agattacaat tcactgatat tttaggaaca
    28201 attaaaaacg ttgaagtacc tgtaagccaa ttagaaaaag tacttgataa cgaaatgatg
    28261 tttgacggtt cttctatcga aggtttcgta cgtatcgaag aatctgacat gtacttacat
    28321 ccagatttag atacttgggt aatcttccca tggactgctg gtcaaggtaa agtagcacgt
    28381 ttaatttgtg atgtatataa aacagatggt acaccatttg aaggggaccc tcgtgcaaac
    28441 ttaaaacgtg tattaaaaga aatggaagat ttaggcttca cagactttaa cctagggcct
    28501 gaaccagaat tcttcttgtt taagttggat gaaaaagggg aaccaacttt agaacttaat
    28561 gatgatggtg gatatttcga tttggcacct acagatttag gtgaaaactg tcgtcgtgat
    28621 attgttttag aattagagga tatgggcttc gatattgaag ctagtcacca tgaagttgca
    28681 cctggtcaac atgaaattga ctttaaatat gcagatgctg ttacagcatg tgataacatc
    28741 caaacattta aattggttgt taaaacaatc gcacgtaaac ataatttaca cgcaacattt
    28801 atgcctaaac cattatttgg tgtgaatggt agcggtatgc actttaacgt ttcattattc
    28861 aaaggtaaag aaaatgcatt ctttgatcca aatactgaaa tgggcttaac ggaaactgca
    28921 tatcaattta cagcaggtgt acttaaaaat gcacgcggat ttactgctgt atgtaacccg
    28981 ttagtaaact catataaacg tttagtacct ggttatgaag caccatgtta tattgcatgg
    29041 agtggtaaaa accgttcacc gttaatccgt gtaccatctt caagaggatt atcaactcgt
    29101 atcgaagtac gttcagtaga tccagctgca aacccataca tggcgttagc tgcaatctta
    29161 gaagctggac tagatggtat taaaaataaa ttaaaagttc cagaaccagt taaccaaaat
    29221 atttacgaaa tgaaccgtga agaacgtgaa gcagtaggca ttcaagactt accttcaaca
    29281 ctttatactg cattaaaagc aatgcgtgaa aatgaagtta ttaaaaaagc tttaggaaat
    29341 catatctata atcaatttat taattcaaaa tcaattgaat gggattacta cagaactcaa
    29401 gtatctgaat gggaaagaga tcagtacatg aagcaatatt aatacgctaa acaatgatgg
    29461 gaaatcagta atatcaaggg ctagagcgtt ttgctttagc tcttttttga tttaactggg
    29521 caacttttta aggtgtaaaa tgtgtctttt gttacgattg ggcaactttt ggtcaagtaa
    29581 atgttttgtg tatttatttt tttaaagctg gggaagacca ttttatattt tagttcacat
    29641 gaattttaat atatttggag gtgatgagat gaggcgataa aagaacgtcg cgaaaacgtt
    29701 gagtattact tgaaaatagc cacattcata ttacttctca tggaattcat ttgcagaacg
    29761 ttctaaggta agaccccgaa aagaggggcc ttactactca ttattaaggg ggtaatacta
    29821 tatgaaaaga gaaacaaaac aaaaaatatc tttttgttta tcgatcggta ttttcatttt
    29881 agttatacta ctattgattt tctaaaaaat taaaaatttc gcctcatcta atttatgaat
    29941 tgctatgatg aaatatacaa tacaatcaaa aaattgatag aaaacaaaga gataacgagt
    30001 tatcaaatta ataaagatac aggaataagt tacggtaata ttaatgctat gcgccgtgga
    30061 gaaagaagaa tagaaaattt aagcttaaag aatgcaaaga tcttatatga atatgcgaaa
    30121 aaggtattat aatataagca ttgagttcaa taggcataca ataactgccc aaactagtga
    30181 ctgagtggga gtttttatag tattaaaagt tttctaaaag cgaaagaaat catgttta
//
LOCUS       DALMNS010000023        29689 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.023, whole genome shotgun sequence.
ACCESSION   DALMNS010000023 DALMNS010000000
VERSION     DALMNS010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 29689)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29689)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29689
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.023"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..629
                     /locus_tag="O6Y56_000843"
     CDS             <1..629
                     /locus_tag="O6Y56_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HDB5574124.1"
                     /translation="DKEAIKTAPRITDFLNEESKAYYEQVKAYLDDLGIPYIEDPNLV
                     RGLDYYTHTAFELMMDNPNYDGAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLL
                     LALEEEGIELDIEENLDLFIVTMGDQADRYAVKLLNHLRHNGIKADKDYLQRKIKGQM
                     KQADRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFKK"
     gene            645..2411
                     /gene="aspS"
                     /locus_tag="O6Y56_000844"
     CDS             645..2411
                     /gene="aspS"
                     /locus_tag="O6Y56_000844"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDB5574125.1"
                     /translation="MSKRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDRE
                     GIVQVVFNPAFSEEALKIAETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNI
                     KVINKSETPPFSINEENVNVDENIRLKYRYLDLRRQELAQTFKMRHQITRSIRRYLDD
                     EGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQI
                     VKCFRDEDLRADRQPEFTQVDIEMSFVDQEDVMQMGEEMLKKVVKEVKGVEINGAFPR
                     MTYKEAMRRYGSDKPDTRFEMELIDVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAE
                     QYTRKDMDALTEFVNIYGAKGLAWVKVVEDGLTGPIGRFFEAENVETLLTLTGAEAGD
                     LVMFVADKPNVVAQSLGALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAA
                     HHPFTSPKEADIAKLGTAPEEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGF
                     TKEQAQEQFGFLLDAFKYGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFPKTASATCL
                     LTNAPGEVSDKQLEELSLRIRH"
     gene            2489..2679
                     /gene="ssrS"
                     /locus_tag="O6Y56_000845"
     ncRNA           2489..2679
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="O6Y56_000845"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            2744..2872
                     /locus_tag="O6Y56_000846"
     CDS             2744..2872
                     /locus_tag="O6Y56_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574126.1"
                     /translation="MGLIAFNNCFLVEFWENNQSNNAKHKILSYYVIMYKSVKEVK"
     gene            2872..3645
                     /locus_tag="O6Y56_000847"
     CDS             2872..3645
                     /locus_tag="O6Y56_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HDB5574127.1"
                     /translation="MKHQFSRNELAIGQQGLDLLKQQTVVILGVGGVGSFAAEALART
                     NIGHIILIDKDDVDITNVNRQLHALTTTVGQSKVSLMEERIKLINPDCKVTPLHMFYT
                     EETYEEIFDNYDIDYFVDASDTIMYKVHLMKECLDRGIKVISSMGAANKTDPTRFTIS
                     DISKTHTDPMAKIIRQKLKKLGIRKGIPVVFSDESPIVIREDVKDIVGDKNAINRKGQ
                     MPPSSNAFVPSVVGLICASYVVNDVLKDIPVRRIKDKGQ"
     gene            complement(3807..5081)
                     /locus_tag="O6Y56_000848"
     CDS             complement(3807..5081)
                     /locus_tag="O6Y56_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500242.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HDB5574128.1"
                     /translation="MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMI
                     FYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKDMQLVVEEAKMSGQVILLLDEIH
                     RLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
                     TRAIEDEENGLKTYQPKIDEDAMAYFSTQSQGDVRSALNALELAVLSADNDKDGYRHV
                     TLQDAKDCLQKGAFVSDKDGDMHYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTI
                     VRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQAVIELCLSPKSNSA
                     MSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPD
                     KLKNKIYYEPKTTSKSEQQLKEIYNNLLKQRP"
     gene            5166..5588
                     /locus_tag="O6Y56_000849"
     CDS             5166..5588
                     /locus_tag="O6Y56_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002458938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HDB5574129.1"
                     /translation="MKISTKGRYGLTLMISLAKKEGQGCISLKSIAEENNLSDLYLEQ
                     LVGPLRNAGLIRSVRGAKGGYQLRVPAEEISAGDIIRLLEGPITFVESIESEPPAQKQ
                     LWIRMRDAVRDVLDNTTLKYLAEYVDTSEDLDGYMFYI"
     gene            5688..5870
                     /locus_tag="O6Y56_000850"
     CDS             5688..5870
                     /locus_tag="O6Y56_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HDB5574130.1"
                     /translation="MADESKFDQFKGNVKETVGNVTDNKELEKEGQQDKATGKAKEVV
                     ENAKNKITDAIDKLKK"
     gene            5910..6056
                     /locus_tag="O6Y56_000851"
     CDS             5910..6056
                     /locus_tag="O6Y56_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574131.1"
                     /translation="MSFMDKAKDAVEKFKNSDNEQVKNVKDKINEYTGSNNEEKKENE
                     DKEK"
     gene            complement(6293..7306)
                     /locus_tag="O6Y56_000852"
     CDS             complement(6293..7306)
                     /locus_tag="O6Y56_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDB5574132.1"
                     /translation="MAIKYSALNLVPIREGEDERTAINDMVKLAQHLDELSYERYWIA
                     EHHNAPNLVSSATALLIQHTLEHTKHIRVGSGGIMLPNHAPLIVAEQFGTMATLFPNR
                     VDLGLGRAPGTDMMTASALRRDQHDGVYKFPEEVSLLQQYFGPAHQQAYVRAYPAVGK
                     NVPLYILGSSTDSAHLAARKGLPYVFAGHFAPQQMKEAIEIYKTLFEPSDVLDEPYVI
                     VCLNTIVAENDDEAQYLASSMAQVMVSITRGRMQPVQPPTHELQNILTPREYAMAMER
                     QKISLIGSENTVQQKIQDFMETYGEVNEIMAISYIYDKDMQLDSYRRFKNVINQINEK
                     STL"
     gene            7618..8760
                     /locus_tag="O6Y56_000853"
     CDS             7618..8760
                     /locus_tag="O6Y56_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDB5574133.1"
                     /translation="MEIYADYAATTPVKPEVVDAMMTIYNSHYGNPSSIHAKGRDARK
                     YLDESRRQIAQLLGADTHEIIFTSGATESNNTAIKGIVKANEQLGNHIITSKIEHHSV
                     LHVFEQLEREGFDVTYLDVDDTGAIDLDQLEETITDKTILVSIMFVNNEVGTVQQIYD
                     IQDIIAETNAYFHVDAVQAIGHLDVKFDEFEIDAMSITAHKFGGPKGVGALLVKDHVT
                     LDYPQLGGEQELKRRAGTENLAQIVGMAKALQLAEKNRDDNNIHLMNLKEQFLVKLQE
                     RSIPFELNGSMTDATGHIVNLYFPFVEVETMLTLLDMAQIYVSSGSACTAGSTQPSHV
                     LGAMFEDEERSNHSIRFSFNELTTENEINAIVAEIHKIYFKFKEES"
     gene            8761..9879
                     /gene="mnmA"
                     /locus_tag="O6Y56_000854"
     CDS             8761..9879
                     /gene="mnmA"
                     /locus_tag="O6Y56_000854"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDB5574134.1"
                     /translation="MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTD
                     ENGVCTATEDYNDVIEVCNQIGIPYYAVNFEKEYWDKVFTYFLDEYKKGRTPNPDVMC
                     NKEIKFKAFLDHAMNLGADYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQ
                     QQLSKVMFPIGDIEKSEVRRIAEEQGLVTAKKKDSTGICFIGEKNFKTFLSQYLPAQP
                     GDMITLDGKKMGKHSGLMYYTIGQRHGLGIGGDGDPWFVVGKNLKDNVLYVEQGFHHD
                     ALYSDYLIASDYSFVNPEDNDLDQGFECTAKFRYRQKDTKVFVKRENDHALRVTFAEP
                     VRAITPGQAVVFYQGDVCLGGATIDDVFKNEGQLNYVV"
     gene            10509..11177
                     /locus_tag="O6Y56_000855"
     CDS             10509..11177
                     /locus_tag="O6Y56_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDB5574135.1"
                     /translation="MIDQQTIYQYIQNGKIEEALQALFGNIEEDPTIIENYINAGIVL
                     ADANEIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQEAIKLYQQALQTEIEQV
                     DCNYMIGMAFNQLESFKLALPYLMTAAELDKDKDTEVQFQYGLVLCQLEMFNEAITQL
                     KHVLTIDKNHVDARYNLGLALFMKNEDIDEAITHFKEAVTIDPKHLLSQHALKTFTKM
                     KEEE"
     gene            11179..13656
                     /locus_tag="O6Y56_000856"
     CDS             11179..13656
                     /locus_tag="O6Y56_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RecD-like DNA helicase"
                     /protein_id="HDB5574136.1"
                     /translation="MSDPTLFDYSMIKGTVEAILFQNSDNFYTVLKVDTIETNEDFDT
                     MPTVVGFLPNIVEGDVYTFKGQVVDHPRYGKQLKAETFEKEMPQTKEAIISYLSSDLF
                     KGVGKKTAQNIVNTLGDNAINDILDDHSVLEKVSGLSKKKQKQIAEQISANQESERIM
                     IRLHDLGFGPKLSMAIYQFYLGDTLTILDRNPYQLIYDIKGIGFNKADQLARNIGIAY
                     NDNERLKAALLYTLEEECIKQGHTYLPINVVIDLTVDVLNYQDEEVIEPEKLDEMLQY
                     LNEEKRLIIDNEQVAIPSLYYSEIKSVQNLFRIKTHTNKLTEIEQSDLQMHIGEIEDA
                     NQVNYAASQKEALQTAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYVN
                     DDYPVVLAAPTGRASKRLQESTGLEAMTIHRLIGWNQDTKPEDILENEINARLIIIDE
                     MSMVDTWLFHQFLSAVPLDAQLIFVGDEDQLPSVGPGQVFKDLIESKAIPRVNLTEVY
                     RQQDGSSIIELAHRMKLGQKIDITQRFHDRSFINCQANQIPTVVEKVVTSAVNKGYTM
                     ADIQVLAPMYKGNAGIKRLNQVLQDILNPKKKDTREIEFGDVVFRKGDKVLQLVNRPN
                     DNIFNGDIGVIVGIFGAKENALNKDVLVVDFEGNEITFTKQDMMELTHAYCTSIHKSQ
                     GSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKTSLVLLGDPEAFDIGLKTNGQARLTQ
                     LCTLLKNYFNSEDEEMLENTATNDTGASQTTIDDQVEVPMSSNASEEVTSDSTKTDTN
                     VLTEATMFKIDPMINMGEITPYDFIER"
     gene            13999..16629
                     /gene="alaS"
                     /locus_tag="O6Y56_000857"
     CDS             13999..16629
                     /gene="alaS"
                     /locus_tag="O6Y56_000857"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDB5574137.1"
                     /translation="MKKLKASEIRQKYLNFFVEKGHMVEPSAPLVPIDDDTLLWINSG
                     VATLKKYFDGRETPKKPRIVNSQKAIRTNDIENVGFTARHHTFFEMLGNFSIGDYFKQ
                     EAIEFAWEFLTSDKWMGMEPDKLYVTIHPEDMEAYNIWHKDIGLEESRIIRIEGNFWD
                     IGEGPSGPNTEIFYDRGEAYGQDDPAEEMYPGGENERYLEVWNLVFSEFNHNKDHSYT
                     PLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIEKVSGKQYLVNNEQDVAFK
                     VIADHIRTIAFAISDGALPANEGRGYVLRRLLRRAVRFSQTLGINEPFMYKLVDIVAD
                     IMEPYYPNVKEKADFIKRVIKSEEERFHETLEDGLAILNELIKKAKVTTNEINGKDAF
                     KLYDTYGFPIELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLK
                     NITSASTFVGYDTATAQTTLTHLIYNGEEVSQVEAGETVYFMLTETPFYAVSGGQVAD
                     TGIVYNDNFEIAVSEVTKAPNGQNLHKGVVQFGQVNVGATVSAEVNQNDRRDIQKNHS
                     ATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNEEIDQVERLVNEEIWKG
                     IDVNIQEMDIASAKEMGAMALFGEKYGDVVRVVNMAPFSIELCGGIHVRNTSEIGLFK
                     IVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKSQLKVKSDDQVVDKLTQLQDE
                     EKALLKQLEQRDKEITSLKMGNIEDQVEEINGYKVLVTEVDVPNAKAIRSTMDDFKSK
                     LQDTIIILASNVDDKVSMVATVPKSLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGG
                     TQPENISKSLSFIKDYIKNL"
     gene            16692..16952
                     /locus_tag="O6Y56_000858"
     CDS             16692..16952
                     /locus_tag="O6Y56_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IreB family regulatory phosphoprotein"
                     /protein_id="HDB5574138.1"
                     /translation="MENFDKTMKFDYEELPTQDVRDVLNNVYRTLDERGYNAVNQIVG
                     YLLSGDPAYIPRQNEARNQIRHIDRDVIMEELVSYYLKEQNK"
     gene            16956..17384
                     /gene="ruvX"
                     /locus_tag="O6Y56_000859"
     CDS             16956..17384
                     /gene="ruvX"
                     /locus_tag="O6Y56_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDB5574139.1"
                     /translation="MLQHKILGLDVGSRTVGIAISDIMGWTAQGLDTLRINEENNELG
                     IDQLVDIIKKNNVGTVVIGLPKNMNNSIGFRGEASLTYKEKLLEAYPSIEIVMWDERL
                     STMAAERSLLEADVSRQKRKQVIDKMAAVFILQGYLDSLH"
     gene            17399..17707
                     /locus_tag="O6Y56_000860"
     CDS             17399..17707
                     /locus_tag="O6Y56_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1292 domain-containing protein"
                     /protein_id="HDB5574140.1"
                     /translation="MTEHNHDSQLEINNEEELLTLFDEEGNEVLYRKVLEFYHPEFKK
                     EYVILAEEGAQSDEDDMIELVPMINEPDESGDGGKLVPIETDEEWDMIEEVVNTEMEE
                     "
     gene            17992..18630
                     /locus_tag="O6Y56_000861"
     CDS             17992..18630
                     /locus_tag="O6Y56_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HDB5574141.1"
                     /translation="MDDLNKKYLIDLHQHQNSSIEVLREFAEVNEVPIVDRLTLDLIK
                     QLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKENLATYHFEN
                     QVRIIEGNALEQFENVNDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYH
                     GFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNIDDGLAISIKGE"
     gene            18633..19556
                     /locus_tag="O6Y56_000862"
     CDS             18633..19556
                     /locus_tag="O6Y56_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HDB5574142.1"
                     /translation="MTELLVTPKSLSHMETLIDLGADAFVIGEQKFGLRLPGEFNRQQ
                     MTEAVALAHKNDKKVYAAVNGLFHNYHLDAVEDYINFLHEIRVDRIIFGDPAVVMYVK
                     AQENPIPLHWNAETLVTNHFQCNYWGKRGASRAVLARELNLDEIINIKENSNVEIEVQ
                     VQGMTCMFQSKRMLLGNYYTFQDRQMKIERRNDEQSLLLYDEERQNNYPVYEDYNGTH
                     IMSPNDICLIEELAPFFEAGIDSFKIDGILQTEEYINVVTEQYRQAIDLYNEDPEIYE
                     DEKFMLMDPIEEIQPDHRPFDEGFLYKQTVY"
     gene            19568..20836
                     /locus_tag="O6Y56_000863"
     CDS             19568..20836
                     /locus_tag="O6Y56_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006190454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HDB5574143.1"
                     /translation="MKTIEEIKSTPKTVMKKPELLAPAGNLEKLKIAVHYGADAVFLG
                     GQEYGLRSNADNFTMEEIAEGVEFANRYGAKIYVTTNIIAHDENIEGLESYLRNLEKT
                     GATGIIVADPLIIETCKEVAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGA
                     MEMREMKEKVDIEIEAFIHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYELLE
                     VDDNGELDVFYNQGEVTPFAMSPKDLKLIESIPQMMDIGVDSLKIEGRMKSIHYIATV
                     VSVYRKVIDAYAADPDNFKINPEWLIELDKCANRDTAPAFFEGTPGYEEQMFGQQQSK
                     KSPFDFCGLVLDYNEDTKIATIQQRNNFKPGQEIEFFGPEIETFTQVVEAIYDEEGNS
                     LDAARHPLQIVQIKVDRPIYPNNMMRKEIG"
     gene            20836..21459
                     /gene="udk"
                     /locus_tag="O6Y56_000864"
     CDS             20836..21459
                     /gene="udk"
                     /locus_tag="O6Y56_000864"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HDB5574144.1"
                     /translation="MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKD
                     QKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDITIDFK
                     PKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQY
                     LSVVRPMHDQFIEPTKKYADIIIPEGGSNKVAIDIMTTKIQSLVSKQ"
     gene            21487..21963
                     /gene="greA"
                     /locus_tag="O6Y56_000865"
     CDS             21487..21963
                     /gene="greA"
                     /locus_tag="O6Y56_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDB5574145.1"
                     /translation="MENQKQYPMTQEGFEKLERELEELKTVKRPEVVEKIKVARSFGD
                     LSENSEYDAAKDEQGFIEQDIQRIEHMLRNALIIEDTGDNNVVKIGKTVTFVELPGDE
                     EESYQIVGSAESDAFNGKISNESPMAKALIGKGLDDEVRVPLPNGGEMNVKIVNIQ"
     gene            22289..23023
                     /gene="pxpB"
                     /locus_tag="O6Y56_000866"
     CDS             22289..23023
                     /gene="pxpB"
                     /locus_tag="O6Y56_000866"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001617363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HDB5574146.1"
                     /translation="MDVRFINEQTIMIYFENKISEETYRNVTAMVRWIREKEILEIQD
                     IVPSYRAVLIYFDEQAITPSKLIENLELNKFNEKNLHAVNQTNRIIKIPVQYGGTYGP
                     DIEEVAKHNRITVEQVIEKHTNKPYLIYMLGFMPGFPYLGGLDEQLHTPRRNQPRLKI
                     HAGSVGIANNQTGLYPSDSPGGWQIIGRTPLKVFSSEREPMSMYEAGEWIQFYAIDEQ
                     EFIQIERDISDGNFNVDDWVVIENVN"
     gene            23013..24023
                     /locus_tag="O6Y56_000867"
     CDS             23013..24023
                     /locus_tag="O6Y56_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000023326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HDB5574147.1"
                     /translation="MSIKILKPGLFSTVQDLGRKGYEHIGFAGAGAMDQFSFKVAQSL
                     INNDGPAIEYTLIGPTIQFNTQNTFVITGGSVNASLNNKTISMNSVILAEKGDILKIG
                     AITKGARGYLTFGQSINVPPIAESYATHTRSSIGGFKGRKLLANDVITVKINNDFKEN
                     IGKTIHLQDDLLPENNIIHILQGPQFEAFSEEARAKIVNHPYLITEQSDRMGYRLEGD
                     SVAPINQADIISEPVALGSVQVPNDGQPIILLNDKQTIGGYTKIATVCKFDLPKLAQM
                     KPQDTIQFKWISFQEAVDKNREQMSLFNEILKSHQKTPIFDTSSLRHTSKKLATILKG
                     DL"
     gene            24025..24474
                     /locus_tag="O6Y56_000868"
     CDS             24025..24474
                     /locus_tag="O6Y56_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein subunit"
                     /protein_id="HDB5574148.1"
                     /translation="MNIEKIEQIIKLVKENDVKKFKYKNFEVEIEIDFTDSNHLAAHS
                     NQSNQSMNNNDLTASKANDNSNVSTNDYHDIKSPMVGTFFLQDSKELTEPIVKVGDKV
                     NKGDIIGYVEAMKVLNEVTTDVAGEITEIVADHGTNVEYDQVLVRIK"
     gene            24488..25849
                     /locus_tag="O6Y56_000869"
     CDS             24488..25849
                     /locus_tag="O6Y56_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDB5574149.1"
                     /translation="MLRCLIANRGEIAVRIIRACREYGIETVAVYAKGDEQSLHVHLA
                     DQAICIGEANALDSYLNIDRIISAAQITGANAIHPGYGFLSESTKFAQTVEEQGIAFI
                     GPTKKTMEMMGDKITARQTVHHAGVPVIPGSNGAVNHVSEIEKLAKDIGYPVVIKAAS
                     GGGGKGIRIVKKAEDLEKAFKEAKSEGKKYFDDDRVYVEAFIPVAKHVEVQVMGDGQD
                     NYVHLGERDCSVQRKNQKLIEESPCAALTEERRQQICNDAVKVARAANYRSAGTIEFL
                     VTDTAHYFIEMNARIQVEHTVTEMRAERDLVAAQMYLLEHNHLPFSQSDIQFNGHVIE
                     ARINAENPEKKFQPTPGKVTALHLPQGFNVRVDSLLYHGYQVSPYYDSLVAKVIVKSH
                     DRASAIDKLKATLDEMVIDGFSTTADFLYAVLNYPLYRDGDAKDVDIKFLEKHQIVKG
                     VEL"
     gene            25849..26601
                     /gene="pxpA"
                     /locus_tag="O6Y56_000870"
     CDS             25849..26601
                     /gene="pxpA"
                     /locus_tag="O6Y56_000870"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HDB5574150.1"
                     /translation="MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENV
                     MNETVKLAKAHNVAVGAHPGLPDLKGFGRRNIDISNEEIYNLMIYQLGALQGFCRIHQ
                     VKINHVKPHGALYQMGAKDREIASVIAQAVHDFDPSLVLVGLANSYLISEAKNVGLIT
                     ASEVFADRRYEDDGQLVSRKESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQAD
                     TICVHGDGEHALLFVSKIREILMKEGIDIQSL"
     gene            26613..27842
                     /locus_tag="O6Y56_000871"
     CDS             26613..27842
                     /locus_tag="O6Y56_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HDB5574151.1"
                     /translation="MGRNLKLKKESDFEFTKNHKRLLLGSVFLMATSAIGPAFLTQTA
                     VFTSQFFASFAFAILLSIIIDIGAQINIWRILVVTGLRGQEISNKVVPGLGTVISILI
                     AFGGLAFNIGNIAGAGLGLNAIFGLDVKWGAAITAIFAILIFVSKSGQKIMDVVSMIL
                     GIVMILVVAYVMFVSNPPYGDAFVHTFAPEHPMKLVLPIITLVGGTVGGYITFAGAHR
                     ILDSGIKGKQYLPFVNQSAIAGILTTGIMRTLLFLAVLGVVVTGVTLSSENPPASVFE
                     HAIGPIGKNIFGIVLFAAAMSSVIGSAYTSATFLKTLHKSLNERSNLIVIVFIVISTM
                     IFLFIGKPISLLIIAGAINGWILPITLGAILIASKKKSIVGDYKHPNWMFIFGIVAVL
                     VTILTGIFSFKEVLQLF"
     gene            28130..29350
                     /locus_tag="O6Y56_000872"
     CDS             28130..29350
                     /locus_tag="O6Y56_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HDB5574152.1"
                     /translation="MGYRTLKSIFHEHNESKMKEEYIKRFNSLASFNTNINIIPMENG
                     KKVNDLEYPLFFMVTKNLSKKQELISINSRKIDRALNSLPYAAREQYFNDLLIDELQS
                     TNEIENVFSTKQEIAHALNNQASEFLKFRGLVDQYKEIELNKKIKVDNVRDIRAIYDK
                     LVSNEINEQDKLDGELFRKNFVGMHDGSTNKYIHVGLQPETKIVEYIGEMLTFLKYFD
                     APQPFKIMASHYLFEYIHPFYDGNGRVGRFIIAKLLSDYYDNYTALTFSYVINRNKSK
                     YYKAFMTASNHLNCGDLTEFIDTMLELLIAGQERILDELIPKMDATEKLTLYLTSHYK
                     QIDYEFLYLLSMDKLFGNKRNRLTLIDLENILGVGRVKINNTIKKFGNYLVKIKSRPT
                     IYEISDEFLNSIIK"
BASE COUNT        10669 a         4099 c         5743 g         9178 t
ORIGIN      
        1 gtgataaaga agcgattaag actgcaccta gaatcactga tttcttaaat gaggaatcta
       61 aggcatatta tgaacaagta aaagcttatt tagatgattt aggtattcca tatattgaag
      121 atcctaactt agttcgtgga ttggattatt atacacatac agcatttgaa ttaatgatgg
      181 ataacccaaa ctatgatggt gccattacaa ctctttgtgg tggtggccgt tataatggtt
      241 tattagaatt gctagatggt ccaagcgaaa caggtattgg ttttgcgtta agtatagaac
      301 gattattgct tgcacttgaa gaagaaggta tcgaattaga tattgaagaa aacttagatt
      361 tattcattgt tacaatgggt gatcaagcag atcgatatgc tgtgaagtta ttaaatcatt
      421 tgagacataa tggtattaaa gcagataaag actacttaca gcgtaaaatt aaaggacaaa
      481 tgaaacaagc agaccgttta ggtgccaagt ttacaatcgt tattggtgat caagaattag
      541 aaaataataa aatcgatgtt aaaaatatga caactggtga atctgaaaca attgaattag
      601 acgcattagt cgaatatttt aagaagtaga gagggcgtta aaatatgagt aagagaacaa
      661 cttattgtgg attagttact gaagcatttt taggacaaga aattacatta aaaggatggg
      721 ttaacaatcg tcgtgacctt ggtggattga ttttcgttga tttaagagat agagaaggaa
      781 ttgtacaagt cgtgtttaat cctgcatttt cagaagaggc attgaaaatt gctgaaacag
      841 tacgttctga atatgttgta gaagttcaag gtacagttac gaagcgtgac cctgaaacag
      901 ttaaccctaa aattaaaact ggccaagttg aagtacaagt tacaaatatt aaagtgatta
      961 ataaatctga gacaccacca ttttctataa atgaagaaaa tgttaacgtt gatgaaaata
     1021 ttcgattaaa ataccgttat ttagatttac gtcgtcaaga gttagcgcaa acatttaaaa
     1081 tgagacatca aattactcgt tctattcgtc gatatttgga tgatgaaggg ttctttgaca
     1141 tcgaaacacc agtactaacg aagtcaacac ctgagggtgc acgtgactat ttagtaccat
     1201 ctcgtgtcca tgatggtgaa ttttatgcat taccacaatc gccacaatta tttaagcaat
     1261 tattgatgat tagtggattt gacaaatact accaaatcgt aaaatgcttc cgtgacgaag
     1321 atttacgtgc agatcgtcaa cctgaattca cacaagtcga tattgaaatg agttttgtag
     1381 atcaagaaga tgtgatgcaa atgggtgaag aaatgcttaa aaaagttgtt aaagaagtta
     1441 aaggcgttga aattaatggc gctttcccac gcatgacata taaagaagcg atgcgtcgct
     1501 atggttctga taaaccagat acgcgttttg aaatggaatt aattgacgtt tctcaattag
     1561 gacgtgatat ggactttaaa gtatttaaag atactgttga aaatgatggt gaaattaaag
     1621 caattgtcgc taaaggtgca gctgaacaat atacacgtaa agatatggat gctttaacag
     1681 aatttgtaaa catctatggt gctaaaggat tagcatgggt taaagttgtg gaagatggtt
     1741 tgacaggtcc aattggacgt ttctttgaag cagaaaatgt tgaaacatta cttacattaa
     1801 ctggtgctga agctggtgac ttagtaatgt ttgttgcaga caaaccaaat gtcgttgcac
     1861 aaagtttagg tgcattacgt gtcaaattag ctaaagaatt aggtttaatc gatgaaacaa
     1921 aattaaactt cttatgggtg acagattggc cattattaga atatgatgaa gatgcgaaac
     1981 gttacgttgc agcacatcat ccatttacat ctccaaaaga agccgatatt gctaagcttg
     2041 gcactgcgcc agaagaagct gaggcaaatg cttatgacat agtattaaat ggttatgaat
     2101 taggtggcgg ttcaatcaga attcatgacg gtgagttaca agaaaaaatg ttcgaagttc
     2161 ttggatttac taaagaacaa gcacaggaac aattcggctt cttactagat gcatttaaat
     2221 atggtgcacc acctcatggc ggtattgcat taggattaga ccgattagtc atgttattga
     2281 ctaatagaac aaacttgaga gatacaattg cattccctaa aacagcatct gctacatgtt
     2341 tattaacgaa tgcgcctggt gaagtttctg ataaacaatt agaagaactt tctttgcgaa
     2401 ttcgtcacta aattttaaaa aatcaataaa ctttggtttg ttataatttc attaatttta
     2461 attatgtggt aatataacat cataagatag tcatctgagt tgttcgtaag tttgcttttt
     2521 aatttgggcc taacactctt tgatcaaggg agcccaatgg gttttcttgc agcgtacacg
     2581 ccttatatga aggacgtaca aaacaagaaa cagggcaccc acctgtatat aacaggccga
     2641 atgatcaagc tattataact acggcaatac ggactctatc gatacgcaag actttgtctt
     2701 gcgtattttt atgcttttct ttaagttttt aataaagaat tagttgggtt taatagcgtt
     2761 taataattgt ttcctcgttg aattttggga aaataatcaa agcaataatg ctaaacataa
     2821 aattttaagt tactatgtaa ttatgtataa atcagtgaaa gaggtaaaat aatgaaacat
     2881 caattttcaa gaaatgaact agcgattgga caacaaggtt tagatttatt gaagcaacaa
     2941 actgttgtca tacttggtgt tggaggtgtt ggttcatttg ctgctgaagc attagcaaga
     3001 acgaatattg gtcatattat attaatagat aaagatgatg ttgatattac aaatgtaaac
     3061 agacaattac acgctttaac tacaacggta ggacaaagta aagtttcttt gatggaagaa
     3121 cgtattaaat taattaatcc agattgtaaa gtcacgcctt tacatatgtt ttatacagaa
     3181 gagacatatg aagaaatttt cgataattac gatatagatt attttgtaga tgcaagtgat
     3241 acaataatgt acaaagtaca cttaatgaaa gagtgtcttg accgagggat taaagtgatt
     3301 tccagtatgg gtgctgcaaa taaaacagat ccaacacgtt ttacaatttc agatatctct
     3361 aaaacacata ccgatccaat ggccaaaatt attcgtcaaa aattgaaaaa actaggaatt
     3421 cgtaaaggga ttccagttgt attttcagat gaaagcccaa ttgtcataag agaagatgta
     3481 aaagatatag ttggagataa aaatgctatc aatcgaaaag gacaaatgcc accttcttca
     3541 aatgcctttg tgccaagtgt tgttggatta atttgtgcaa gttatgtggt gaatgacgta
     3601 ttaaaagata ttccagttcg tcgcattaaa gacaaagggc aataattaat ttttgaaagg
     3661 gataattttc aacgtaaggc aagtgtaacc acaccataaa actaaaactg actagttcgc
     3721 aagcatagta gaatatgcct cgtgtactag tcagttttga tttgattata gctaaaatat
     3781 caaaggtaat cgatttaatc ttatttttac ggcctttgtt taagtaagtt gttatatatt
     3841 tctttgagtt gttgttcact tttagatgtc gtttttggtt cataataaat tttgtttttt
     3901 agtttatcag gtaaatattg ctgtgaaaca tagccattaa catattggtg tggatatttg
     3961 taaccaatag atcggcctag atctttagca ccttgataat gtccatcttt taaatggttt
     4021 ggaatttggc ccacatgacc gtttctaata tcggacaatg cactatcaat ggcactcatt
     4081 gctgaatttg acttaggtga taagcatagt tcgattactg cttggcttag tggaattcta
     4141 gcttctggta aacctagacg ttctgctgat tcaatagcag caagtgttct ctgaccagca
     4201 ttaggtgagg ctaagcctat atcctcatag ctaattacaa gtaatcgtcg aactattgta
     4261 ggtaaatctc cagcttcaat taatcgtgct aaataatgta aagcggcatt gacgtcgcta
     4321 ccacggatag atttttggaa agcgctcata acatcgtaat gcatgtcacc atctttatca
     4381 cttacaaatg cacctttttg taaacagtct ttagcatctt gcaatgtaac atgtcgataa
     4441 ccgtctttgt cattatctgc gcttaataca gctaattcca atgcatttaa cgcactacga
     4501 acatcacctt gactttgtgt agaaaagtag gccatggcat cttcatcaat tttgggttga
     4561 tatgttttta aaccattctc ttcatcctct attgcacgag ttaacgcttg acgcacatct
     4621 tcatcattta aaggatataa ctcaaaaatt tgcgctcttg aacgaatcgc tggattgata
     4681 gcatgataag gatttgaagt tgtagcaccg atcaagacga ttttgccatt ttctaaatga
     4741 ggtaataaaa agtcttgttt agctttatct agtcgatgta tttcatctaa taacaagata
     4801 acttgaccag acattttagc ttcttcaaca acaagttgca tatctttttt agtgttagtt
     4861 acagcattca attgtctgaa tttatattgc gtactgcccg aaattgcttt ggcaatactt
     4921 gttttgccta taccaggtgg accataaaaa atcattgaag ttaatttttt tgtatcaacc
     4981 attcttctga taatgcctct tggtccaact aaatgttgtt gggaaatgat ttcatctata
     5041 ttttttgggc gcattctcga tgctaatggt tctgtactca catttgtcac acctttctta
     5101 tactatctta actcaaaaaa tgctaaaatg ggaatatcaa tattcgaatt aagtgaggtt
     5161 atacaatgaa aatttctact aaagggagat atggacttac attgatgatt tctcttgcta
     5221 aaaaagaggg gcaaggatgt atatcattaa agtcaattgc tgaagaaaat aatttgagtg
     5281 atttatattt agaacagctt gtaggtcctt taagaaatgc ggggttaatt cgaagtgtac
     5341 gcggtgctaa aggtggatac caattaagag taccagcgga agaaatctca gcaggggata
     5401 ttataagact gttagaaggt ccaattacat ttgttgaaag tattgaatca gaaccacctg
     5461 cgcaaaaaca actatggatt cgcatgagag atgcagtgag agatgtttta gataatacaa
     5521 cattgaaata tttagcggaa tatgtagata caagtgaaga tttagacgga tacatgtttt
     5581 atatttaatc gtataaatac tatactataa cataaaaact tcatattata atgtttagcg
     5641 aacctccttt gtggtatata aatatataca tctaaggagg tttcactatg gcagacgaaa
     5701 gtaagttcga tcaatttaaa ggcaatgtta aagaaacagt aggtaacgtt actgacaaca
     5761 aagaattaga aaaagaaggt cagcaagata aagcgactgg taaagcaaaa gaagttgttg
     5821 aaaatgctaa aaacaaaata actgatgcaa ttgataaact taaaaaataa gttcaattaa
     5881 actaatcaaa tataagagga gcgattaata tgagttttat ggataaagct aaagacgcag
     5941 tagaaaaatt taaaaatagc gataatgaac aagttaaaaa tgtaaaagat aagataaatg
     6001 aatatacagg ttcgaataac gaagagaaaa aagaaaatga agataaagag aaataaaatt
     6061 ctttaaattt tggatatgct tttcaatatt ttgaaagcgc cccatcaaat aaacacttac
     6121 acagtgtaaa gttgaagggg cgctttcata tttgcattag aattttaagt gaatttgaat
     6181 cattactaaa ataaatgatc gaacaataaa gacatctttc attcaaaatg ctgttactgt
     6241 atatttttat taatattatg gatacatact ttcacttagt ttatttatca cattataaag
     6301 tgcttttttc atttatctga tttataacat tcttgaaccg acgataagag tctaattgca
     6361 tatctttatc ataaatataa cttattgcca taatttcgtt gacttcacca taagtttcca
     6421 taaaatcttg aattttttgt tgaacagtat tttctgaacc tattaatgat attttctgtc
     6481 tttccatagc catcgcgtat tctctcggcg ttaatatatt ttgtagttca tgtgttggcg
     6541 gttgaacggg ctgcattctg ccacgagtga tactaaccat tacttgtgcc atagatgaag
     6601 ctaaatattg tgcttcgtca tcattttcag caacgattgt atttaaacat acaataacat
     6661 aaggttcgtc taatacatca gaaggttcaa ataacgtttt gtaaatttcg atagcttctt
     6721 tcatttgttg aggtgcaaaa tgtccagcga acacatatgg aagccctttg cgagcagcta
     6781 aatgtgcaga atctgttgaa gaaccaagaa tgtataaagg cacattttta cctactgctg
     6841 gataagcacg aacatatgct tgttggtgag cagggccgaa atattgttgt aataatgaaa
     6901 cctcttctgg aaatttataa acaccatcat gttgatctcg tcttaatgca cttgcggtca
     6961 tcatatctgt tccaggtgca cgtcctaatc ctaaatcgac acgatttgga aataatgttg
     7021 ccatcgtgcc aaattgttcc gcaacgatta atggagcatg gttaggtaac atgattcctc
     7081 cagaacctac acgtatgtgt ttcgtatgtt ctaacgtatg ttgaattaat aaagcagttg
     7141 ctgaacttac taggttggga gcgttatggt gttcagcaat ccaatatctt tcatatgata
     7201 attcgtctaa atgttgtgcg agcttaacca tatcattaat tgctgttcgt tcatcttcac
     7261 cttctcgaat agggacaagg tttaatgctg aatatttaat cgccattttt gtatcgtcct
     7321 tcctttttta tgatataaga agtataccaa tcgaataacc aggtaaatat taaattgctc
     7381 ataaccaaaa taatagtacg ttacatttta caaatgaaaa aatatctgca aatactaaaa
     7441 tttataaaaa agacaagaat aaagcgataa acttaaaaaa gcctatcgaa aagcatgtgt
     7501 agaaaatggt aaaatataat taaaaacatt ataaataaag ttaaacagaa aagtagaaaa
     7561 atagtatgta aggtgctatt attggaacat tgataaaatt gtgaggagtg tccaaacatg
     7621 gaaatttatg cagattatgc tgcgaccaca ccagtaaaac ctgaagtagt agatgcgatg
     7681 atgacgattt acaattcgca ttatggtaat ccatcatcaa tacatgctaa gggaagagat
     7741 gcgcgtaaat atttagatga gtcaagacgt caaattgcac aattacttgg tgcggataca
     7801 catgaaatta tatttacgag tggtgcaaca gaatcgaata atacggcaat taaaggcata
     7861 gtaaaagcaa atgaacaatt gggtaatcac attatcacat cgaagattga acatcattct
     7921 gtgttacatg tttttgaaca attagagcga gaaggttttg atgtaacata tctagatgtt
     7981 gatgatacag gtgctattga tttagaccaa cttgaagaaa caattacaga taagacgatt
     8041 ttagtatcta ttatgtttgt aaataatgaa gttggcacag tgcaacaaat ttatgatatt
     8101 caagatatta ttgctgagac aaatgcatat ttccatgttg atgcggttca agcaattgga
     8161 catcttgatg ttaagtttga cgaatttgag atcgacgcaa tgagtattac tgctcataag
     8221 tttggcggac caaaaggtgt cggtgcatta ttagttaaag accatgtcac attagattat
     8281 cctcaacttg gcggtgaaca agaattgaaa cgccgtgcag gtactgaaaa tcttgcacaa
     8341 attgtcggga tggctaaagc attacaatta gcagaaaaga atcgagacga taacaatatt
     8401 catttaatga atttaaaaga acaattttta gttaaattac aagaaagatc gattccattt
     8461 gaattaaatg gttcaatgac ggatgctaca ggccatattg taaatctata ttttccgttt
     8521 gttgaagttg aaacgatgtt aacattgttg gatatggcac aaatctatgt gtcgtctgga
     8581 tctgcatgta cagcaggctc tacacaaccg tcgcatgttt taggtgcaat gttcgaagat
     8641 gaggagcgat caaatcattc gattcgattt agttttaacg aattgactac tgaaaatgaa
     8701 attaatgcaa ttgtagctga aattcataaa atatatttta aatttaagga ggagtcataa
     8761 ttgtcaaata aagatatacg tgttgtcgtt ggtatgtcag gcggtgtaga tagttctgta
     8821 acagcccacg tcttaaaaga acaaggttat gatgtcattg gcatatttat gaaaaactgg
     8881 gatgacactg acgaaaatgg cgtatgtact gcaactgaag attacaacga tgttattgaa
     8941 gtgtgtaatc aaattggcat accatattac gctgttaatt ttgaaaaaga atattgggat
     9001 aaagtcttta cgtatttctt agatgaatac aaaaaaggtc gtactccaaa tccagacgtt
     9061 atgtgtaata aagaaattaa gtttaaagcc tttttagatc atgcgatgaa tttaggtgca
     9121 gattatgtag caacaggaca ttacgcacgc atacatcgtc atgaagatgg tcatgttgaa
     9181 atgttacgtg gtgtagataa taataaagat caaacatact tcttgaatca attatctcaa
     9241 caacaacttt caaaagtgat gttcccaatt ggtgacatcg aaaagagtga agtgcgtcga
     9301 attgctgaag aacaaggact tgttactgct aagaaaaaag attctacagg catttgtttt
     9361 atcggcgaaa aaaactttaa aacattttta tcacaatatt tacctgcaca accgggtgat
     9421 atgataacac ttgatggtaa gaaaatgggt aaacatagtg gtttgatgta ttacacaata
     9481 ggacaaagac atggtttagg tataggtgga gatggcgatc cttggtttgt tgtcggtaaa
     9541 aatctaaaag ataatgtttt atatgtagaa caaggattcc atcacgatgc attatacagt
     9601 gattacttaa ttgcttcaga ctattcattt gtaaatccag aagataatga cttagatcaa
     9661 ggttttgaat gtacagctaa atttagatat cgccaaaaag atacgaaagt ttttgtgaaa
     9721 cgtgaaaacg accatgcact gcgtgttact tttgctgagc cagtaagagc aatcacacct
     9781 ggacaagcag ttgtttttta tcaaggtgat gtgtgtcttg gtggtgcaac aattgacgat
     9841 gtgttcaaaa atgaaggtca attaaattat gttgtataaa caatgggaac aataaattac
     9901 ttatttgaag tttcagcgtt ggaaatgacg aaagacagtt tttgatgaga ataattcatg
     9961 atgatagagt ctgggacatc acaatgtcct aggctctaca atgttatatt ggcagggccc
    10021 caacatagag aaattggaac cccaatttaa acaggcaatg gaagttggcg gggccccaac
    10081 acagagaatt tcgtaaagaa attcaacagg caatggaagt tggcggggcc ccaacataga
    10141 gaatttcgta aagaaattct acaggcaatg cgagttgggg atggggcccc aacacagaga
    10201 atttcgtaaa gaaattctac aggcaatgca agttggggta aacaaattaa ttttgtaaaa
    10261 atatcatttc tgtcccactc cctatgcatg agtctaatta tgtattccta tttttaagta
    10321 cataatagtg gtggctaatg cggaagaacc attacataat aaaccgttaa tggttcttta
    10381 gcatttctat tccattcccg ctttttcatg aatgaagatg atattagatt atattttatt
    10441 cgttgttaag tgattcgaga catacaattt atcaagatgt tataattgat gagaaatgag
    10501 gttcgtaaat gatagatcaa caaacaattt atcaatacat acaaaatgga aaaatagaag
    10561 aagcgttaca agcattgttc ggaaatatcg aagaggatcc tacaattatt gaaaattata
    10621 ttaatgccgg tatcgtactt gctgatgcga atgagattga aaaggcagag cgttttttcc
    10681 aaaaagcttt aacaatagat ccgaagaatg gcgtcgtatt ttataatcta gcaaatgtat
    10741 attataatca gcaacgttat caagaagcta ttaaattata tcaacaagca ttacaaacag
    10801 agattgaaca agttgattgt aattatatga ttggtatggc gtttaatcag ttagaatcat
    10861 ttaagctggc attgccgtat ttaatgactg cagcggaact agataaagac aaagatacag
    10921 aagttcaatt tcaatatggt cttgtattat gtcaattaga aatgtttaat gaagccataa
    10981 cacaacttaa acatgtatta acgattgata aaaatcatgt tgatgcaaga tacaatttag
    11041 gcttagcgtt atttatgaaa aatgaagata ttgatgaagc aataactcat tttaaagaag
    11101 ctgtgactat cgaccctaaa cacttattaa gtcagcatgc gctgaaaaca ttcactaaaa
    11161 tgaaagagga ggagtaacat gtcagaccct acactatttg attattcaat gatcaaaggt
    11221 actgttgaag cgatattgtt tcaaaacagt gataattttt atacagtgct taaagtagat
    11281 actattgaaa caaatgaaga ctttgataca atgccaactg ttgtagggtt tcttccgaat
    11341 attgttgaag gcgatgtcta cacatttaaa ggtcaagttg ttgatcatcc acgttatggt
    11401 aaacaattaa aagcagagac ttttgaaaaa gaaatgccac aaacgaaaga agcaattata
    11461 agttatttat caagtgattt gtttaaaggt gtaggtaaaa agacagctca aaatattgtt
    11521 aatacattag gtgataatgc gataaatgat atattagatg accattcagt gctagaaaaa
    11581 gtttcgggat tatctaaaaa gaaacagaaa caaattgcag aacaaatttc agcaaatcaa
    11641 gaatctgaaa gaataatgat tcgtttacat gatttagggt ttggtcctaa actttcaatg
    11701 gcaatttatc agttttatct cggtgataca ctgactattt tagatcgaaa tccctatcaa
    11761 ttgatttatg atattaaagg tattggtttt aataaagcag atcaacttgc tagaaatatt
    11821 ggtatcgctt ataacgataa tgaacgatta aaagctgcgt tgctctatac gttagaagaa
    11881 gaatgtatta aacagggaca tacatatttg cctataaatg ttgttataga tttaacggtt
    11941 gatgtattaa attatcaaga tgaagaagtc atcgaacctg aaaaattaga cgaaatgttg
    12001 caatacttaa atgaggaaaa acgactaatt attgacaatg aacaagttgc aattccaagt
    12061 ttgtattatt ctgaaatcaa aagtgttcaa aacttattca gaataaagac gcatacaaat
    12121 aaacttacgg aaattgaaca gtcagattta caaatgcata ttggcgaaat agaagatgcg
    12181 aatcaagtga actatgcagc ttcacaaaaa gaagctttgc aaacggctat caattctaag
    12241 gtgatgctat taaccggtgg gccgggaaca ggaaagacga cagtaattaa aggcattgta
    12301 gaattatatg ctgagattca tggcttatca ttagattatg atgattatgt caatgatgat
    12361 tatccagttg tattagcagc gccaacagga agagcatcca aaagactaca agagtcaact
    12421 ggattagaag caatgacgat tcatcgttta ataggttgga atcaagacac aaagccagag
    12481 gatatattag aaaatgaaat aaacgcacga ctcataatca ttgatgagat gtctatggta
    12541 gatacttggt tgttccacca atttttaagt gcagttcctt tagatgcgca attgatattt
    12601 gtaggtgatg aggaccaatt gccttctgta ggtcctggtc aagtatttaa agatttaatt
    12661 gaatcgaaag ctataccacg agttaatctg actgaagtat atcgtcaaca agatggttca
    12721 agcattatag aattagcaca tcgaatgaaa ttgggtcaga aaattgatat tacacagcgt
    12781 tttcatgata gaagttttat taactgtcag gcaaaccaaa taccaacagt agttgagaag
    12841 gtagttacta gtgctgttaa taaagggtat actatggctg atattcaagt gcttgcacca
    12901 atgtataaag gaaatgccgg tattaaacgt ttaaatcaag ttttacaaga tattttaaac
    12961 cctaaaaaga aagacacacg agaaattgag tttggtgatg tagtctttag aaaaggtgac
    13021 aaagtattac aacttgttaa taggccaaat gataacatat ttaatggtga cataggagtt
    13081 attgttggta tttttggggc gaaagaaaat gcccttaata aagatgtact tgttgtggat
    13141 tttgaaggta atgaaattac atttacaaaa caagatatga tggaattaac gcatgcatat
    13201 tgtacatcaa tccataaatc acaaggttca gaatttccta ttgttatcat gcctattgtt
    13261 aaacagtatt ttagaatgtt acaaagaccg atattatata ctggtttaac cagagcgaaa
    13321 acgagtttag ttttacttgg tgatccggaa gcatttgata ttggattgaa aacaaatggt
    13381 caagcgcgtt taacacaatt atgtacattg ttgaaaaatt attttaattc agaagatgaa
    13441 gaaatgctgg aaaacacagc tactaatgat acaggagctt cacaaacgac aatagatgat
    13501 caagtagaag ttccaatgtc atcgaatgct agtgaagaag ttacgtctga ttcaacaaaa
    13561 acagatacaa atgtattaac ggaagctaca atgtttaaaa ttgacccaat gattaatatg
    13621 ggagaaatca cgccgtatga ctttatagaa cgttgacaac aagcgtaaat gtaactaaaa
    13681 tagaattaaa ttcgtataaa gatgagtagt taatgatttg tttatcagag atgtactggt
    13741 tggtgaaaag tacaacaaac attagtgaac gctactttat gcacaactgt atagtcgatt
    13801 taaagtgata aatgtgttga attacattta taactagggt ggtaccgcga taacgttcgt
    13861 cccttttgag gatgggcgtt ttttattttt taataataaa aaatgatatt gatttatact
    13921 agtttttcaa atcgactatc tgtgtcatca atttttatgg aatggtaatt taaaaacagt
    13981 aaataggatg tgtaaatgat gaaaaagtta aaagcgagtg aaattagaca aaaatatcta
    14041 aatttctttg ttgaaaaagg acatatggtt gaaccttctg caccattagt gccaattgat
    14101 gatgatacat tattatggat taattcaggt gtagcaacat taaagaaata ttttgatgga
    14161 cgtgaaacac ctaaaaagcc aagaattgta aactctcaaa aagctatccg tacaaatgat
    14221 attgaaaatg ttggtttcac agcgcgtcac catacattct ttgaaatgtt aggtaacttc
    14281 tcaattggtg attactttaa acaagaagcg attgaatttg cttgggaatt tttaacgagt
    14341 gataaatgga tgggtatgga gccagataaa ttgtacgtta cgattcatcc ggaagatatg
    14401 gaagcataca acatttggca taaagatatt gggcttgaag aaagtcgtat tattcgcatt
    14461 gaaggtaact tctgggatat tggtgaaggg ccttcaggac cgaacactga gattttctat
    14521 gatcgcggag aagcatatgg acaagacgat ccggcagaag aaatgtatcc aggtggagaa
    14581 aatgaacgct atcttgaagt atggaactta gtatttagtg aattcaatca taataaagat
    14641 catagttaca caccattacc taataaaaac attgataccg gcatggggct tgagcgtatg
    14701 gcctcagttt ctcaaaatgt acgtactaac tatgaaacag atttatttat gcctataatg
    14761 aatgaaatcg aaaaagtatc aggtaaacaa tatttagtaa acaacgaaca agatgtggca
    14821 tttaaagtaa ttgctgacca cattcgtacg attgcatttg caatttctga tggtgcatta
    14881 cctgccaatg aaggtagagg atatgtatta cgtcgattgt tacgtcgtgc cgttcgtttt
    14941 agtcaaacgt taggaatcaa tgagccattt atgtacaaac ttgttgatat tgttgcagac
    15001 attatggaac catattatcc aaatgttaag gaaaaagcag atttcattaa gcgtgttata
    15061 aagtctgaag aagaacgatt ccatgaaaca ttagaagatg gtttagcgat tttaaatgaa
    15121 ttaattaaaa aagctaaagt gacaacaaat gaaattaatg ggaaagatgc atttaaattg
    15181 tatgatacgt atgggttccc aattgaatta actgaagaaa tagcagtgca agcaggattg
    15241 aaagttgata tgacaacatt cgagtcagaa atgcaacaac aacgtgatcg tgcacgtcaa
    15301 gcacgtcaaa attctcaatc aatgcaagtt caaagtgaag tattgaaaaa tattacatct
    15361 gcaagtactt ttgttggtta tgatactgcg acagctcaaa caacactaac acacttgata
    15421 tataatggtg aagaagtttc acaagttgaa gcgggtgaaa cagtatactt catgttaacg
    15481 gaaacaccat tttatgcagt cagtggtgga caagttgcgg atacaggtat tgtttataat
    15541 gacaattttg aaattgctgt tagtgaagta accaaagcac caaatggtca aaacttgcat
    15601 aaaggagtag tacaatttgg ccaagtaaat gttggcgcta cagtgtctgc tgaagtgaac
    15661 caaaatgatc gacgtgacat tcaaaagaac catagtgcaa cacatttatt acatgcagcg
    15721 ttgaaatcag tactgggtga tcatgttaac caagctggtt cactagtaga agcagatcgt
    15781 ttacgttttg atttctctca ttttggtcca atgactaatg aggaaattga tcaagttgaa
    15841 cgcttagtaa atgaagaaat ttggaaaggt attgacgtta acattcaaga aatggatatt
    15901 gcttcagcta aagaaatggg cgcaatggca ttattcggtg aaaaatatgg tgatgttgtg
    15961 cgtgtagtaa atatggcacc attttcaatt gaattatgtg gtggtattca tgtccgcaat
    16021 acttctgaaa ttggcttatt caaaatagta agtgagtcag gtacaggagc tggtgtgcgt
    16081 cgtattgaag cattaacagg taaagcagct ttcttatatt tagaagatat tcaagagaaa
    16141 tttaatacga tgaaatcaca gctgaaagtg aaatctgatg atcaagtagt cgataagtta
    16201 acacaattgc aagatgaaga aaaagcatta ttaaaacaat tagagcaacg tgacaaagaa
    16261 atcacatcac ttaaaatggg taatattgaa gatcaagttg aagaaatcaa tggctataaa
    16321 gtattggtta ctgaagtgga tgtaccaaat gcgaaagcaa ttcgctcgac aatggacgat
    16381 tttaaatcta aactacaaga tacaattatc attcttgcaa gtaatgttga tgataaagta
    16441 tcgatggttg caactgtccc taaatcttta acaaataatg ttaaagccgg tgatcttatc
    16501 aaacaaatgg caccaatcgt tggtggtaaa ggtggcggtc gtccagatat ggctcaaggt
    16561 ggcggtacac aacctgaaaa tatctcaaaa tcattaagct ttattaaaga ttacattaaa
    16621 aatctataat ttaaagccat aatattgtat gatgatagtg agttatattt gtaattaaag
    16681 gagtgtcgca aatggaaaac tttgataaaa caatgaaatt cgattatgaa gaacttccaa
    16741 cacaagatgt aagagatgtt ttaaataatg tttatcgaac attagatgaa cgaggatata
    16801 atgccgtaaa ccaaattgta ggttatttat tatcaggtga ccctgcgtat attccacgcc
    16861 aaaatgaagc aagaaatcaa attcgtcata ttgatagaga tgttattatg gaagagcttg
    16921 tttcttacta tttaaaagag caaaataaat aatttatgtt acaacataaa attttaggac
    16981 tcgatgtcgg tagtagaacg gtaggaattg caattagtga tataatgggt tggacggcac
    17041 aaggattaga cacactccga atcaatgaag aaaataatga attaggtatt gaccaattag
    17101 tagacattat taaaaaaaat aatgtgggta cagtcgtaat aggactacct aaaaacatga
    17161 ataattcaat aggatttcga ggcgaagctt cgttaacata taaagaaaaa ttattagaag
    17221 cttatccttc tattgagatt gtgatgtggg atgaaagatt aagcacaatg gctgctgaac
    17281 gatcattatt agaagcagat gtttcaagac aaaaaagaaa acaagtgatt gataaaatgg
    17341 cagcggtatt tattttacaa ggctatttag attcactaca ttaaaaggag attttactat
    17401 gactgaacat aatcatgatt cacaactaga aattaataac gaagaagaat tattaacttt
    17461 attcgatgaa gaaggaaatg aagttttata ccgaaaagtt ttagaatttt atcatcctga
    17521 attcaaaaaa gagtatgtta tcttagctga agaaggtgct caatcagatg aagacgatat
    17581 gattgagctt gtaccaatga tcaatgaacc agatgagtca ggtgacggtg gtaagttagt
    17641 accaatcgaa actgatgaag aatgggacat gattgaagaa gttgtaaata ctgaaatgga
    17701 agaataatta aaaagatttt actcttgcta accttaagat gggtaggcaa gagtattttt
    17761 ttaagtcaag caatgtataa ataattaacg cttataattt tattgaaaat atggtaaaat
    17821 atctaaagtt aaattttata tgaatgattc gcttctataa ataaaatagc tttgcgtcta
    17881 acacaaaatc agtcatttaa ttggttggca aaattataat caattgtgaa ggctgattta
    17941 ttttattgtc ataatcatat tgacttattt tacataaagg aagtttaaaa catggatgac
    18001 ctaaataaaa aatatttaat agatttacat caacatcaaa atagttcaat cgaagttttg
    18061 cgtgaatttg ccgaagtaaa tgaagtgcca atcgtagatc gtttaacatt agatttaatt
    18121 aagcaattaa ttcgtatgaa taatgttaaa aatattttag aaattggtac agcaatcggc
    18181 tatagttcta tgcaattcgc ttctatatct gatgacattc atgtcacaac gatagagcgt
    18241 aatgaaacga tgattcaata tgctaaagaa aatttagcta cttatcattt tgaaaaccag
    18301 gttcgaatta ttgaaggtaa tgctttagag caatttgaaa atgtaaatga caaagtttat
    18361 gatatgatat ttattgatgc agcaaaagcg caatcaaaga aattttttga aatatataca
    18421 ccacttttaa agcaccaagg tcttgtaatt acagataatg ttttatatca cggttttgta
    18481 tcggatattg ggattgttag atcgagaaat gtaagacaaa tggttaaaaa ggttcaagat
    18541 tataatgagt ggttaataaa gcaaccagga tatacaacga attttttaaa tatagacgat
    18601 ggattagcga tttcaattaa aggagaatga ctatgacaga attacttgtc acacccaagt
    18661 cattaagcca tatggaaaca cttattgatt taggtgcaga tgcttttgta attggcgagc
    18721 aaaagtttgg tttaagactt ccaggggaat tcaatagaca acaaatgaca gaggctgtcg
    18781 cattagctca caaaaacgat aaaaaagtat atgcggcggt gaatggatta tttcataatt
    18841 atcatttaga tgctgtagaa gattatatta attttttaca tgaaatacga gttgacagaa
    18901 ttattttcgg ggatccagca gtagtaatgt atgtgaaggc gcaagagaat ccaataccac
    18961 ttcattggaa tgcagagacg ttagtaacta atcattttca atgtaattac tggggtaaaa
    19021 gaggcgcatc aagagctgtc ttagcacgtg agctgaattt ggatgaaatt attaatataa
    19081 aagaaaattc aaatgtggaa attgaggtgc aagttcaagg aatgacttgt atgttccaat
    19141 caaagcgtat gctactaggc aattattata cgttccaaga tcgtcaaatg aaaattgaac
    19201 gtcgcaatga tgaacaatct ttattacttt atgatgaaga aagacaaaat aattacccag
    19261 tttacgaaga ttacaatggt acgcacatta tgtcaccaaa cgacatttgt ttaattgaag
    19321 aattagcacc attttttgag gcgggtatag attcatttaa aatcgatggt attctacaaa
    19381 cagaagaata tattaatgtg gtaacggaac agtatcgtca agcgatagat ttgtacaatg
    19441 aagatcctga aatctatgaa gatgagaaat ttatgttgat ggacccaatt gaagaaattc
    19501 aacctgatca tcgaccattt gacgaaggtt tcttatataa acaaacagta tattaaggag
    19561 gttaatcatg aagacaatag aagagattaa atcaactcct aaaacagtta tgaagaaacc
    19621 agaattatta gcacctgctg gaaacttaga aaagttaaaa atagcagtac attatggcgc
    19681 tgatgccgta tttttaggtg gtcaagaata tggattacgt tcaaatgctg ataatttcac
    19741 gatggaagaa atagctgaag gtgttgaatt tgcgaaccgt tacggtgcca aaatttatgt
    19801 tacgacaaat attattgcac atgatgagaa tattgaaggt ctagaatcat atttgcgtaa
    19861 tttggaaaag acaggtgcga caggtatcat tgttgcagat cctttaatta tcgaaacatg
    19921 taaagaagtt gcgccaaaac ttgaaattca tttatctact caacaatcac tttctaatta
    19981 caaagctgta gaatattgga aagaagaagg attggatcgt gttgtattag cacgtgagac
    20041 cggcgcgatg gaaatgcgtg aaatgaagga aaaagtagat attgaaatcg aagcatttat
    20101 tcatggtgct atgtgtatcg cctattcagg tagatgtaca ttaagtaatc atatgactgc
    20161 aagggattcc aacagaggcg gttgctgtca aagttgtcgt tgggattatg aattattaga
    20221 agttgatgat aatggtgaac ttgatgtatt ttataatcaa ggtgaagtta caccgtttgc
    20281 gatgagtcct aaagatttaa aattaatcga atctattcct caaatgatgg atattggtgt
    20341 ggactcatta aaaattgaag gacgtatgaa gtcaattcat tatattgcaa cagttgtctc
    20401 agtatatcgt aaagtcattg atgcgtatgc ggcagatcct gacaacttta agattaatcc
    20461 ggaatggtta attgagttag ataaatgtgc aaatagagac actgcaccag cattctttga
    20521 gggtacacct ggttatgaag aacagatgtt tggtcaacaa caatctaaaa aatcaccatt
    20581 tgatttttgt ggtttggtat tagattataa tgaagataca aaaattgcga ctattcaaca
    20641 acgaaataac tttaaaccag gtcaagaaat agaattcttt ggtccagaaa ttgaaacatt
    20701 tacacaagta gtagaagcaa tttatgatga agaaggtaac agcttagacg cggcgcgcca
    20761 tccattacaa atcgttcaaa ttaaagtgga tcgcccgata tatccaaaca acatgatgag
    20821 aaaggaaatt ggctaatgaa agctactaca atcattggca tagctggtgg atctggctca
    20881 ggaaaaacaa ctgtaactaa cgaaattatg aaaaacttag aaggtcatag tgtcgcttta
    20941 cttgctcaag attactatta taaagatcaa aagcacttga ctttcgacga gcgtctagaa
    21001 accaattatg accatccatt tgcattcgat aatgatttat taattgaaaa tcttaaagac
    21061 ttgaaaaatg gtaaagcagt agaagtaccg acatatgatt atgctagtca tacaagaagt
    21121 gacattacca ttgattttaa acctaaagat gttattatcg tagaaggtat tttcgcttta
    21181 gaaaataagg tattacgtga tatgatggat gttaaaatat atgttgatac agatgcagac
    21241 ttgagaatat tacgccgttt aacacgagat actaaagagc gtgggcgttc aatggactct
    21301 gttatcaatc aatatttaag tgttgttaga cctatgcatg accaatttat tgaaccgact
    21361 aagaaatatg ctgatataat tattcctgaa ggtgggagca ataaagttgc aatagatatt
    21421 atgacaacaa aaattcagtc tttagttagc aagcaatagt ataattcagt aaaggaagat
    21481 gacaatatgg aaaatcaaaa gcaatatcca atgactcaag aaggttttga aaaattagag
    21541 cgtgaacttg aagaattaaa aacagttaag cgtcctgaag ttgtagagaa aattaaagtt
    21601 gcacgttcat ttggtgactt atcagagaac tctgagtatg atgcggcaaa agatgaacaa
    21661 ggattcatcg aacaagatat tcaaagaatt gagcatatgt taagaaatgc attaatcatt
    21721 gaagatactg gagataacaa cgttgttaaa attggtaaaa cagtaacgtt tgtagaatta
    21781 ccaggtgatg aagaggaaag ttatcaaatc gttggttcag ctgaatcaga tgcatttaat
    21841 ggtaagattt caaatgaatc accaatggct aaagcgttaa ttggtaaagg tttagatgat
    21901 gaagttcgtg ttccactacc taatggtggc gaaatgaacg taaaaattgt taatatccaa
    21961 taaatgatca aatagattgt ttaattgcgc gattgaagtg tgttaatgat acttcggtcg
    22021 tgctttttta tattcaaaat caaaaaatcg gacagatgaa aagtgaaaat tttccatcag
    22081 accgattgat agcagaacct aaattagtgt aagtgtttca atattaacta ctccatttta
    22141 aaaaagcaaa atatttccga gaaaacaaat tgattatcat ttgttattgt atgcgatttg
    22201 aattacttat taaacaactt gtgcttctca atgatacaat gaaaaggtat tcaatactgt
    22261 tttattgcaa tacaaagggg gatttagagt ggatgtaaga tttattaacg agcagacaat
    22321 tatgatttat tttgaaaata aaatatctga agagacatat cgaaatgtca cagcaatggt
    22381 acggtggata cgagaaaaag aaatattaga aattcaagat attgtccctt cgtatcgagc
    22441 agttctaata tattttgatg aacaagctat aacaccttct aaattaattg aaaatttaga
    22501 acttaacaaa tttaatgaaa aaaatcttca tgctgtgaat caaaccaatc gtattattaa
    22561 aatacctgtt caatatggtg gtacatatgg acctgatatt gaagaagtag caaagcataa
    22621 tcgaataact gttgagcaag ttattgaaaa acatacaaat aaaccttatt taatatatat
    22681 gctaggattt atgcctggat ttccatactt aggcggactt gatgaacaac tacatacacc
    22741 tagacgtaat cagccaaggt taaaaattca tgcaggttct gtaggtattg cgaataatca
    22801 aacaggacta tatccatcag attctcctgg cggatggcaa attattggac gcacaccgtt
    22861 aaaagtattt agcagcgagc gtgaaccaat gtcaatgtat gaagcaggag aatggataca
    22921 attttatgca atagatgaac aggaatttat acaaatcgaa agagatatat cagatggcaa
    22981 ctttaatgtt gatgactggg tggtgatcga aaatgtcaat taagatttta aaaccaggtc
    23041 tcttttcaac ggtacaagat ctaggaagaa aaggttatga acatattgga tttgcaggcg
    23101 caggtgccat ggatcaattt agttttaagg ttgcgcagtc attaattaac aatgatggtc
    23161 cagcgattga atatactttg attggtccta ccattcaatt taatacgcaa aatacatttg
    23221 ttataaccgg tggtagtgtt aatgcttcgc taaataataa aactatatca atgaattctg
    23281 tcatattagc tgagaaaggt gacattttaa aaataggtgc tataaccaaa ggtgcacgcg
    23341 gttatcttac ttttggtcaa tctatcaacg tacctcctat tgctgaaagt tatgcaacac
    23401 atacccgaag cagtatagga ggattcaaag gtagaaagtt attagctaat gatgtaataa
    23461 cagtgaaaat aaataatgac tttaaagaaa acattggaaa gactattcat ttacaggacg
    23521 atttattgcc agaaaataat attatacaca ttcttcaagg acctcaattc gaggcatttt
    23581 ctgaagaggc tagagcgaaa attgtaaatc atccatattt aatcactgaa caatcagacc
    23641 gtatggggta tcgtttggaa ggtgacagcg ttgcaccaat taatcaagca gatatcattt
    23701 ctgaaccggt tgctcttggc agtgttcaag tgccaaatga tggtcaacct attattctgc
    23761 ttaatgataa acaaacgata ggtggttata ccaaaattgc aactgtatgc aaatttgatc
    23821 tgccaaagtt agcacagatg aaaccacaag atacaattca atttaaatgg atatcattcc
    23881 aagaagctgt agataagaat cgggaacaaa tgtctctgtt taatgaaatt cttaagagtc
    23941 atcaaaagac tccaattttt gatacatcta gcttgcgaca tacttcgaaa aaattagcaa
    24001 caattttaaa aggggatttg taaaatgaat attgaaaaaa tcgaacaaat aatcaaatta
    24061 gtgaaggaaa atgatgttaa gaaatttaaa tataaaaatt ttgaagttga aatagaaatt
    24121 gacttcactg actcgaatca tttggctgca cacagtaatc aatcaaatca aagtatgaac
    24181 aataatgatt tgacagcttc aaaagcgaat gataactcca atgtttcgac aaatgattat
    24241 catgacatta aatcaccaat ggtaggtaca ttctttttac aagacagtaa agaattaact
    24301 gaaccaattg tgaaagtcgg tgacaaagtt aacaagggag atattatagg atatgttgaa
    24361 gcgatgaaag tattaaacga ggtaacaaca gatgttgctg gagaaattac tgaaatagta
    24421 gctgatcacg gcacaaatgt tgaatacgac caagttttgg tacgtattaa gtaaaggggg
    24481 taagtaaatg cttcgttgtt taattgcgaa cagaggtgaa attgctgtaa ggattataag
    24541 agcttgcaga gaatatggga ttgaaactgt agcagtttat gcaaaagggg acgagcaaag
    24601 cttgcatgta catttagcag atcaagctat atgtattggg gaagctaatg ctttggatag
    24661 ttatttaaat attgaccgca tcatatctgc tgcacaaatc actggtgcta atgcaattca
    24721 cccaggatat ggctttttat cagaatcaac aaaatttgct caaaccgttg aggaacaagg
    24781 catagcgttt atagggccta ctaaaaaaac gatggaaatg atgggggata aaataacagc
    24841 aagacaaaca gttcatcatg caggtgttcc tgtgattcca ggatcaaatg gtgctgtgaa
    24901 tcatgtgtct gaaattgaga agcttgccaa agacattggt tatccagttg ttatcaaagc
    24961 tgccagtggc ggtggtggta aaggtatacg tattgtaaag aaagctgaag atttagaaaa
    25021 ggcatttaaa gaagctaaaa gtgaaggaaa aaaatacttt gatgatgatc gtgtttatgt
    25081 tgaggctttt atacctgttg caaaacatgt tgaagttcaa gttatggggg atgggcagga
    25141 taattatgta catttagggg aacgtgattg ttctgtacaa cgtaaaaatc aaaaattaat
    25201 cgaagaatct ccttgtgcag cattaactga agaaagacga caacaaatat gtaacgatgc
    25261 tgttaaagtt gcacgtgcag caaattatag aagtgcaggt acgattgaat tcttagtaac
    25321 tgataccgca cattacttta ttgaaatgaa tgctcgaatt caagttgaac atactgttac
    25381 agagatgcga gcagaacgtg atttggttgc agcacaaatg tatttattgg aacataatca
    25441 tttacctttt tcacaaagcg atattcaatt taatggtcat gtgatagaag cgagaataaa
    25501 tgccgaaaat cctgaaaaga aatttcaacc aacaccaggt aaagtgacag cgttacattt
    25561 accacaaggt tttaatgtgc gagtcgattc tttactatat cacggttatc aagtttcacc
    25621 atattatgat tctttagtag ctaaagtaat tgtaaaatct catgatagag cttcagcaat
    25681 tgataaattg aaagccacct tagatgaaat ggtgatagat ggattttcta caactgccga
    25741 ttttttatat gcagttttaa attatccact atatcgtgat ggagatgcaa aagatgttga
    25801 tattaaattt ttagaaaaac atcaaattgt taaaggggtg gaattataat gcgagttgat
    25861 ttgaattgtg atttaggaga agcatttgga aattattcct ttggtggtga tcatcaaatt
    25921 attccgttaa ttacaagtgc gaatgttgct tgtggttttc acgctggtga tgaaaatgta
    25981 atgaatgaaa cggtaaaact tgccaaagca cataatgttg cagtaggtgc acatcctggt
    26041 ttacctgatt tgaaaggctt tggcagacga aatatagata tctctaacga ggagatttat
    26101 aatttgatga tttatcaatt aggtgcatta caagggtttt gtcgcattca tcaagttaaa
    26161 attaatcatg ttaaaccgca tggtgcattg tatcagatgg gtgcaaaaga cagagaaata
    26221 gcaagcgtta tagcacaagc tgttcatgac tttgatccat cactagtgtt ggtaggatta
    26281 gcaaattcat atctaatttc agaagcaaag aatgtcggat taattacagc ttctgaagtg
    26341 tttgctgata gacgatacga agatgatggg cagctcgtta gtagaaaaga aagtgatgct
    26401 gtgattactg atactgacga agcacttaag caggttttga agatggtgaa ggaaaataaa
    26461 gttatttcaa aaaacaataa ggaagtaacg ttacaagcag atacaatttg tgtgcatggt
    26521 gatggagaac atgcattatt atttgtttcg aaaattagag aaattttaat gaaagaaggc
    26581 attgatattc aatccttata gggggctaaa aaatggggag aaatttaaag cttaaaaaag
    26641 aaagtgactt tgaattcaca aaaaatcata aaaggttatt attaggttct gtatttttga
    26701 tggcaacttc tgcaattggg ccagcatttt taacgcaaac agcagtattt acatcacaat
    26761 tttttgcaag tttcgcattt gctatattac tgtctatcat cattgacatt ggtgcacaaa
    26821 ttaatatatg gcgcatatta gttgtaactg gtttaagagg tcaagaaata tcaaataaag
    26881 ttgttcctgg gcttggtact gttatctcaa tattgattgc atttggtggt ctagctttta
    26941 atattggtaa tattgctggt gccggtttag gtttaaatgc aatttttgga ttagatgtaa
    27001 aatggggcgc agctattact gcaatctttg caatattaat ctttgtaagt aaaagtggcc
    27061 aaaaaatcat ggacgttgtt tcaatgattc ttggtattgt gatgatttta gttgtggcat
    27121 atgtgatgtt tgtttctaat ccaccttatg gtgatgcttt tgtgcataca tttgcgccag
    27181 aacatccaat gaaattagtc ttgccaatca ttacgttagt tggtggaact gtaggtggtt
    27241 atattacctt tgcaggtgca catcgtatat tagactctgg cattaaaggt aagcaatatt
    27301 taccatttgt aaatcaatca gcaattgctg gtattttaac tacaggtatt atgagaacgt
    27361 tactattcct agcggtatta ggagttgttg taacaggtgt gacactaagt tctgaaaatc
    27421 caccagcgtc agtttttgaa cacgcaattg gaccaattgg aaagaatatt tttggtattg
    27481 tgttatttgc tgcagctatg tcatcagtaa ttggctcagc atacacaagc gcaacatttt
    27541 taaaaacact tcataaatca cttaacgaaa gaagtaattt aattgtgatt gtgtttatcg
    27601 ttatttcaac aatgattttc ttatttattg gaaaaccaat cagcctttta attatagcag
    27661 gcgcgataaa tggatggatt ttacctatta cgttaggtgc aattttgatt gcaagtaaaa
    27721 agaaatcaat tgttggtgat tataaacacc caaattggat gttcatcttt ggtatcgttg
    27781 cagtacttgt tacaatattg acaggtatat tctcattcaa agaagtactt cagttatttt
    27841 aaaagacatt tcgactaata gcatcactgt aaatgttgtt agtattaggc aagatgtatt
    27901 ttgatttccg gtgattcatt tataaagcat aattagatat atttgttgag agtggtgcat
    27961 gacaaatgta ctgctctttt ttgttatgat gaaaaatctt tttctattga ttgagaaaat
    28021 agatatttat atagttttta aagaaaaaaa gtgataatat ttagctaatc taatgaaaat
    28081 ggatttattg agctaaaaat acattttaaa taagtagagg agggtgcaaa tgggttacag
    28141 aactttaaaa agtatttttc atgaacacaa tgaaagtaaa atgaaggaag agtatattaa
    28201 aagatttaat tctttagctt ctttcaatac taatattaat atcataccta tggaaaatgg
    28261 aaaaaaagtt aatgatttgg aatatcctct attctttatg gtgactaaaa atctatcaaa
    28321 aaaacaagaa ttaatatcaa ttaatagtag aaaaattgat agagcactta attctttacc
    28381 atatgcagct agagaacaat attttaatga tttattaatc gatgaattac aaagtactaa
    28441 tgaaattgaa aatgtattta gtactaaaca agagattgca catgcgttaa ataaccaagc
    28501 atcagaattt cttaagttca gaggcctcgt ggatcaatat aaagagatag aacttaataa
    28561 aaaaattaaa gttgataatg taagagacat tagagcgatt tatgataaat tagtttcaaa
    28621 tgaaattaac gaacaagata agttagatgg agagctattt cgtaaaaatt ttgttggtat
    28681 gcatgatggg tcaacgaata aatatataca tgttgggtta caacctgaaa ccaaaattgt
    28741 tgaatatata ggtgaaatgc taacattttt aaaatatttt gatgcgcctc agccgttcaa
    28801 aatcatggct agtcattatc tgtttgaata tatacatcct ttttatgatg gcaatggtag
    28861 agttggaaga tttataattg ccaagctctt aagtgattat tatgataatt atactgcttt
    28921 gacattttca tatgtcataa atagaaataa atcgaaatat tacaaggcgt ttatgactgc
    28981 ttcaaatcat ttgaattgtg gtgatctgac ggaatttatt gacacaatgc ttgagttatt
    29041 gatagcagga caagaaagaa tacttgatga gttaatacca aaaatggatg cgactgaaaa
    29101 attaacgctt tatttaacta gtcattataa acagatagat tatgaatttt tgtatctcct
    29161 ttcaatggat aaattgtttg gaaataaaag aaatagatta acattaattg atttagaaaa
    29221 catattggga gtaggaagag taaaaattaa taatacaatt aaaaaatttg gtaactactt
    29281 agttaaaatt aaaagtagac caacaattta tgagataagt gatgaatttc taaattcgat
    29341 tataaaataa atgtaatatg tgattcagct atacttatag tatttgtaag attgcgtaat
    29401 tgcttcattg aaaaaatata tttgttgaga gtggtgcatg acaagtgtac tgctcttttt
    29461 gttgagtatc agtattgtga tgttttaatg cgaatattat atgaatcatt atgaaattta
    29521 ataaaaataa ttgaaataat tatcattttt tctgatatac tgttaaacgg tttggaattt
    29581 ttaagtttac actgtattgg ttgatataac tcaactaata attgcgaaca gggtatttca
    29641 aattgaaaag tattatgagt gtgatacata aatcaaaatt gtaggctca
//
LOCUS       DALMNS010000024        29616 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.024, whole genome shotgun sequence.
ACCESSION   DALMNS010000024 DALMNS010000000
VERSION     DALMNS010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 29616)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29616)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29616
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.024"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            80..1081
                     /gene="argF"
                     /locus_tag="O6Y56_000873"
     CDS             80..1081
                     /gene="argF"
                     /locus_tag="O6Y56_000873"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDB5574153.1"
                     /translation="MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLK
                     NKNIALLFEKDSTRTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYD
                     GIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTY
                     VGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDI
                     DQGVKGSDVIYTDVWVSMGEPDEVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPS
                     FHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF"
     gene            1104..2036
                     /gene="arcC"
                     /locus_tag="O6Y56_000874"
     CDS             1104..2036
                     /gene="arcC"
                     /locus_tag="O6Y56_000874"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HDB5574154.1"
                     /translation="MAKIVVALGGNALGKSPQEQLELVKNTAKSLVGLITKGHEIVIS
                     HGNGPQVGSINLGLNYAAEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDK
                     QVVTLVTQVEVDENDPAFNNPSKPIGLFYNKEEAEQIQKEKGFIFVEDAGRGYRRVVP
                     SPQPISIIELESIKTLIKNDTLVIAAGGGGIPVIREQHDGFKGIDAVIDKDKTSALLG
                     ANIQCDQLIILTAIDYVYINFNTENQQPLKTTNVDELKRYIDENQFAKGSMLPKIEAA
                     ISFIENNPKGSVLITSLNELDAALEGKVGTVIKK"
     gene            2207..3763
                     /locus_tag="O6Y56_000875"
     CDS             2207..3763
                     /locus_tag="O6Y56_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000428224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcC family protein"
                     /protein_id="HDB5574155.1"
                     /translation="MENTINESEKKKRFKLRMPGAFMILFILTVVAVIATWVIPAGAY
                     SKLSYEPSSQELKIVNPHNQVKKVPGTQQELDKMGVKIKIEQFKSGAINKPVSIPNTY
                     ERLKQHPAGPEQITSSMVEGTIEAVDIMVFILVLGGLIGVVQASGSFESGLLALTKKT
                     KGHEFMLIVFVSILMIIGGTLCGIEEEAVAFYPILVPIFIALGYDSIVSVGAIFLASS
                     VGSTFSTINPFSVVIASNAAGTTFTDGLYWRIGACIVGAIFVISYLYWYCKKIKKDPK
                     ASYSYEDKDAFEQQWSVLKDDDSSHFTLCKKIILTLFVLPFPIMVWGVMTQGWWFPVM
                     ASAFLIFTIIIMFIAGTGKSGLGEKGTVDAFVNGASSLVGVSLIIGLARGINLVLNEG
                     MISDTILHFSSSLVQHMSGPLFIIVLLFIFFCLGFIVPSSSGLAVLSMPIFAPLADTV
                     GIPRFVIVTTYQFGQYAMLFLAPTGLVMATLQMLNMRYSHWFRFVWPVVAFVLIFGGG
                     LLITQVLIYS"
     gene            4071..4298
                     /locus_tag="O6Y56_000876"
     CDS             4071..4298
                     /locus_tag="O6Y56_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574156.1"
                     /translation="MTHLTKVLDTLTGICVVLLFSKYFVAYANMVFDWKLRWYLLENI
                     PHLPIILFILMFIFGVPSEMIKDRQRKNNGV"
     gene            complement(4604..5551)
                     /locus_tag="O6Y56_000877"
     CDS             complement(4604..5551)
                     /locus_tag="O6Y56_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDT family transporter"
                     /protein_id="HDB5574157.1"
                     /translation="MRLQKAPLVTSGLVLGLLGLGNLLKDLSLTLNAVCGIFAFLIWI
                     HLLCTMLKYFNNVKEQLNSPLVSSVFTTFFMSGFLGTTYLNTFFSNITFINSLITPIW
                     ILCLVGIMTHMIIFSIKYLKDFSLENVYPSWTVLFIGIAIAGLTAPVSGYFFIGQLTV
                     IYGFVATCIVLPIVFKRLKAFPLQTSIKPNTSTICAPFSLVAAAYVIAFPKANAFIVI
                     ILLLLAQIFYFYIIIQLPKLLKEPFSPVFSAFTFPLVISATALKNSLPVLMFPVIWKG
                     LLFIEVLLATVIVLRVFIGYLHFFLKKENQDKFLRNASQ"
     gene            5801..5989
                     /locus_tag="O6Y56_000878"
     CDS             5801..5989
                     /locus_tag="O6Y56_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDB5574158.1"
                     /translation="MRNQIQKLLDSDLSSLHISKQTGVPQSTIHRMRKNERSLDNMSL
                     KNAELLYKFANGIFSDED"
     gene            complement(6465..6538)
                     /locus_tag="O6Y56_000879"
     tRNA            complement(6465..6538)
                     /locus_tag="O6Y56_000879"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6502..6504),aa:Arg,seq:tct)
     gene            6902..7036
                     /locus_tag="O6Y56_000880"
     CDS             6902..7036
                     /locus_tag="O6Y56_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class phenol-soluble modulin"
                     /protein_id="HDB5574159.1"
                     /translation="MEGLFNAIKDTVTAAINNDGAKLGTSIVSIVENGVGLLGKLFGF
                     "
     gene            7093..7227
                     /locus_tag="O6Y56_000881"
     CDS             7093..7227
                     /locus_tag="O6Y56_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class phenol-soluble modulin"
                     /protein_id="HDB5574160.1"
                     /translation="MTGLAEAIANTVQAAQQHDSVKLGTSIVDIVANGVGLLGKLFGF
                     "
     gene            7351..8046
                     /locus_tag="O6Y56_000882"
     CDS             7351..8046
                     /locus_tag="O6Y56_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjG family noncanonical pyrimidine
                     nucleotidase"
                     /protein_id="HDB5574161.1"
                     /translation="MGKLGYKNILIDFDDTIVDFYDAEEWAFHYMANVFNHKATKDDF
                     LTFKKINHQHWEAFQQNKLTKSEVLSERFVNYFKHHQMEVDGHRADVLFRNGLAEAKV
                     KYFDQTLETIVELSKRHDLYIVTNGVTETQKRRLNQTPLHKYIKKIFISEETGYQKPN
                     PEFFNYVFNDIGEDERQHSIIVGDSLTSDILGGINAGIATCWFNFRGFDHNPGIIPDY
                     EINSWKQLNDIVR"
     gene            complement(8154..8594)
                     /locus_tag="O6Y56_000883"
     CDS             complement(8154..8594)
                     /locus_tag="O6Y56_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDB5574162.1"
                     /translation="MSEIKRLEINYKTDELFENFRAFGNKDLYMVNELNGQMIDASSD
                     SPFYGIFVGDQLGARMALLKKGDVEEIYFPDFEDYILLWKLEVLPKYQNRGYASELID
                     FAKSFNMPIKAIGRNDSKDFFLHHGFTDVEAKNIEGHDVLLWKP"
     gene            8789..10402
                     /gene="bshC"
                     /locus_tag="O6Y56_000884"
     CDS             8789..10402
                     /gene="bshC"
                     /locus_tag="O6Y56_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000340457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis cysteine-adding enzyme
                     BshC"
                     /protein_id="HDB5574163.1"
                     /translation="MDCKVVSLNEKDQFIPKIKSSDPVITGLFQYDAAQQTSFEKRMS
                     KENNGREAALSNVIREYMSDLKLSSEQELNIQHLANGSKVVIGGQQAGLFGGPLYTFH
                     KIFSIITLSKELTDTHKQQVVPVFWIAGEDHDFDEVNHTFVYNENHGSLHKVKYHTME
                     MPETTVSRYYPDKAELKQTLKTMFIHMKETVHTQGLLEICDRIIDQYDSWTDMFKALL
                     HETFKAYGVLFIDAQFEPLRKMEAPMFKKILKKHQLLDDAFRATQQRTRNQGLKAMIQ
                     TDTNVHLFLHDENMRQLVSYDGKHFKLNKTDKTYIKEDIINIAENQPELFSNNVVTRP
                     LMEEWLFNTVAFIGGPSEIKYWAELKDVFELFDVEMPIVMPRLRITYLNDRIEKLLSK
                     YNIPLEKVLVDGVEGERSKFIREQASHQFIEKVEGMIEQQRRLNQDLLDEVAGNQNNI
                     NLVNKNNEIHIQQYDYLLKRYLLNIERENDISMKQFREIQETLHPMGGLQERIWNPLQ
                     ILNDFGIDVFKPSTYPPLSYTFDHIIIKP"
     gene            10546..10977
                     /gene="mraZ"
                     /locus_tag="O6Y56_000885"
     CDS             10546..10977
                     /gene="mraZ"
                     /locus_tag="O6Y56_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HDB5574164.1"
                     /translation="MFMGEYDHQLDTKGRMIIPSKFRYDLNERFIITRGLDKCLFGYT
                     LDEWQQIEEKMKTLPMTKKDARKFMRMFFSGAVEVELDKQGRINIPQNLRKYANLTKE
                     CTVIGVSNRIEIWDRETWNDFYEESEESFEDIAEDLIDFDF"
     gene            10993..11928
                     /gene="rsmH"
                     /locus_tag="O6Y56_000886"
     CDS             10993..11928
                     /gene="rsmH"
                     /locus_tag="O6Y56_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017724209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDB5574165.1"
                     /translation="MFHHISVMLNETIDYLNVKENGVYIDCTLGGAGHALYLLNQLND
                     DGRLIAIDQDQTAIDNAKEVLKDHLHKVTFVHSNFRELTQILKDLNIEKVDGIYYDLG
                     VSSPQLDIPERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFS
                     KQIARRIEAHREQQPITTTLELVDIIKEGIPAKARRKGGHPAKRVFQALRIAVNDELS
                     AFEDSIEQAIELVKVDGRISVITFHSLEDRLCKQVFQEYEKGPEVPRGLPVIPEAYTP
                     KLKRVNRKPITATEEDLDDNNRARSAKLRVAEILK"
     gene            11942..12343
                     /gene="ftsL"
                     /locus_tag="O6Y56_000887"
     CDS             11942..12343
                     /gene="ftsL"
                     /locus_tag="O6Y56_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HDB5574166.1"
                     /translation="MAVEKVYQPYDEQVYNSIPKQQPQTKPEKKTVSRKVVVQLTKFE
                     KVLYITLITVIAMLSIYMLSLKMDAYDTRGKIADLDYKIDKQSSENSALQSEIKKNSS
                     YERIYEKAKKQGMSLENDNVKVVRSNGEAKN"
     gene            12324..14558
                     /locus_tag="O6Y56_000888"
     CDS             12324..14558
                     /locus_tag="O6Y56_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HDB5574167.1"
                     /translation="MAKQKIKIKKNKIGAVLLVGLFGLLFFILVLRISYIMITGHSNG
                     QDLVMKANEKYLVKNAQQPERGKIYDRNGKVLAEDVERYKLVAVIDKKASANSKKPRH
                     VVDKKETAKKLSTVIDMKPEEIEKRLSQKKAFQIEFGRKGTNLTYQDKLKIEKMNLPG
                     ISLLPETERFYPNGNFASHLIGRAQKNPDTGELKGALGVEKIFDSYLSGSKGSLRYIH
                     DIWGYIAPNTKKEKQPKRGDDVHLTIDSNIQVFVEEALDGMVERYQPKDLFAVVMDAK
                     TGEILAYSQRPTFNPETGKDFGKKWANDLYQNTYEPGSTFKSYGLAAAIQEGVFDPDK
                     KYKSGHRDIMGSRISDWNRVGWGEIPMSLGFTYSSNTLMMHLQDLVGADKMKSWYERF
                     GFGKSTKGMFDGEAPGQIGWSNELQQKTSSFGQSTTVTPVQMLQAQSAFFNDGNMLKP
                     WFVNSVENPVSKRQFYKGQKQIAGKPITKDTAEKVEKQLDLVVNSKKSHAANYRIDGY
                     DVEGKTGTAQVAAPNGSGYVKGPNPYFVSFMGDAPKKNPKVIVYAGMSLAQKNDQEAY
                     ELGVSKAFKPIMENTLKYLNVGKSKDDTSNAEYSKVPDVEGQDKQKAIDNVSAKSLEP
                     VTIGSGTQIKAQSIKAGNKVLPHSKVLLLTDGDLTMPDMSGWTKEDVIAFENLTNIKV
                     NLKGSGFVSHQSISKGQKLTEKDKIDVEFSSENVDSNSTNNSDSNSDDKKKSDSKTDK
                     DKSD"
     gene            14850..15815
                     /locus_tag="O6Y56_000889"
     CDS             14850..15815
                     /locus_tag="O6Y56_000889"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDB5574168.1"
                     /translation="MIFVYALLALVITFVLVPVLIPTLKRMKFGQSIREEGPQSHMKK
                     TGTPTMGGLTFLLSIVITSLVAIIFVDQANPIILLLFVTIGFGLIGFIDDYIIVVKKN
                     NQGLTSKQKFLAQIGIAIVFFVLSNVFHLVNFSTSIHIPFTNVAIPLSFAYVIFIVFW
                     QVGFSNAVNLTDGLDGLATGLSIIGFTMYAIMSFVLGETAIGIFCIIMLFALLGFLPY
                     NINPAKVFMGDTGSLALGGIFATISIMLNQELSLIFIGLVFVIETLSVMLQVASFKLT
                     GKRIFKMSPIHHHFELIGWSEWKVVTVFWAVGLISGLIGLWIGVH"
     gene            15817..17166
                     /locus_tag="O6Y56_000890"
     CDS             15817..17166
                     /locus_tag="O6Y56_000890"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDB5574169.1"
                     /translation="MLNYTGLENKNVLVVGLAKSGYEAAKLLSKLGANVTVNDGKDLS
                     QDAHAKDLESMGISVVSGSHPLTLLDNNPIIVKNPGIPYTVSIIDEAVKRGLKILTEV
                     ELSYLISEAPIIAVTGTNGKTTVTSLIGDMFKKSRLTGRLSGNIGYVASKVAQEVKPT
                     DYLVTELSSFQLLGIEKYKPHIAIITNIYSAHLDYHENLENYQNAKKQIYKNQTEEDY
                     LICNYHQRQVIESEELKAKTLYFSTQQEVDGIYIKDGFIVYKGVRIINTEDLVLPGEH
                     NLENILAAVLACILAGVPIKAIIDSLTTFSGIEHRLQYVGTNRTNKYYNDSKATNTLA
                     TQFALNSFNQPIIWLCGGLDRGNEFDELIPYMENVRAMVVFGQTKAKFAKLGNSQGKS
                     VIEANNVEDAVDKVQDIIEPNDVVLLSPACASWDQYSTFEERGEKFIERFRAHLPSY"
     gene            17182..18501
                     /locus_tag="O6Y56_000891"
     CDS             17182..18501
                     /locus_tag="O6Y56_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HDB5574170.1"
                     /translation="MDDKTKNDQQESNEDKDELELFTRNTSKKRRQRKRSKATHFSNQ
                     NKDDTSQQADFDEEIYLINKDFKKEESNDENNDSASSHANNNNIDDSTDSNNENEDYR
                     YNQEIDDHNESNGIAVDNEQPQSAPNEQNSDLNDEETVTKKERKSKVTQLKPLTLEEK
                     RKLRRKRQKRIQYSVITILVLLIAVILIYMFSPLSKIAHVNINGNNHVSTSKINKVLG
                     VKNDSRMYTFSKKNAINDLEEDPLIKSVEIHKQLPNTLNVDITENEIIALVKYKGKYL
                     PLLENGKLLKGSNDVKINDAPVMDGFKGTKEDDMIKALSEMTPEVRRYIAEVTYAPSK
                     NKQSRIELFTTDGLQVIGDISTISKKMKYYPQMSQSLSRDSSGKLKTRGYIDLSVGAS
                     FIPYRGNTSTQSESDKNVTKSSQEENQAKEELQSVLNKINKQSSKNN"
     gene            18606..20012
                     /gene="ftsA"
                     /locus_tag="O6Y56_000892"
     CDS             18606..20012
                     /gene="ftsA"
                     /locus_tag="O6Y56_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDB5574171.1"
                     /translation="MEEHYYVSIDIGSSSVKTIVGEKFHNGINVIGTGQTYTSGIKNG
                     LIDDFDIARQAIKDTIKKASIASGVDIKEVFLKLPIIGTEVYDESNEIDFYEDTEING
                     SHIEKVLEGIREKNDVQETEVINVFPIRFIVDKENEVSDPKELIARHSLKVEAGVIAI
                     QKSILINMIKCVEACGVDVLDVYSDAYNYGSILTATEKELGACVIDIGEDVTQVAFYE
                     RGELVDADSIEMAGRDITDDIAQGLNTSYETAEKVKHQYGHAFYDSASDQDIFTVEQV
                     DSDETVQYTQKDLSDFIEARVEEIFFEVFDVLQDLGLTKVNGGFIVTGGSANLLGVKE
                     LLSDMVSEKVRIHTPSQMGIRKPEFSSAISTISSSIAFDELLDYVTINYHDNEETEED
                     VIDVKDKDNESKLGGFDWFKRKTNKKDTHENEVESTDEEIYQSEDNHQEHKQNHEHVQ
                     DKDKEESKFKKLMKSLFE"
     gene            20045..21217
                     /gene="ftsZ"
                     /locus_tag="O6Y56_000893"
     CDS             20045..21217
                     /gene="ftsZ"
                     /locus_tag="O6Y56_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDB5574172.1"
                     /translation="MLEFEQGFNHLATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAIN
                     TDGQALNLSKAESKIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMVFVT
                     SGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDT
                     LIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIM
                     SNQGSALMGIGVSSGENRAVEAAKKAISSPLLETSIVGAQGVLMNITGGESLSLFEAQ
                     EAADIVQDAADEDVNMIFGTVINPELQDEIVVTVIATGFDDKPTSHGRKSGSTGFGTS
                     VNTSSNATSKDESFTSNSSNAQATDSVSERTHTTKEDDIPSFIRNREERRSRRTRR"
     gene            21476..22267
                     /gene="pgeF"
                     /locus_tag="O6Y56_000894"
     CDS             21476..22267
                     /gene="pgeF"
                     /locus_tag="O6Y56_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HDB5574173.1"
                     /translation="MNDNFKKQPHHLIYEELLQQGITLGITTRGDGLSDYPKNSFNMA
                     RYIDDRPYNITQHQLQLAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDAL
                     HGIDAMYTYDSNVLLTMCYADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVN
                     FDLKDLHVVIGPSTSPSYEINDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAAL
                     LNNYGVPKENIYTTAYATSEHLELFFSYRLEKGQTGRMLAFIGQQ"
     gene            22291..22959
                     /locus_tag="O6Y56_000895"
     CDS             22291..22959
                     /locus_tag="O6Y56_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDB5574174.1"
                     /translation="MKDNLQQISTQINDKSEKNNFSTKPNVIAVTKYVTIERAKEAYE
                     AGIRHFGENRLEGFFQKKEALPSDAVIHFIGSLQSRKVKDVINDVDYFHALDRLSLAK
                     EINKRAEHKIKCFLQVNVSGEASKHGIALEDVDQFIDDLKKYDKIEIVGLMTMAPLTD
                     DEAYIRSLFKQLRLKKEEIQRLNLEYAPCDELSMGMSNDYLIAVEEGATFVRIGTKLV
                     GEEE"
     gene            22956..23519
                     /locus_tag="O6Y56_000896"
     CDS             22956..23519
                     /locus_tag="O6Y56_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein SepF"
                     /protein_id="HDB5574175.1"
                     /translation="MSHLALKDLFSGFFVIDDEEEVEVPDKQQQVNEAPAKEQSQQTT
                     KQNAIKSVPQKSASRYTTTSEERNNRMSNYSKNNSRNVVTMNNATPNNASQESSKMCL
                     FEPRVFSDTQDIADELKNRRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGTD
                     IFLCTPDNVEVAGSITDHIENMEHSFD"
     gene            23531..23821
                     /locus_tag="O6Y56_000897"
     CDS             23531..23821
                     /locus_tag="O6Y56_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HDB5574176.1"
                     /translation="MDINVLATIFKFILFVVEIYYFGMIIYFFTSWVPSIRETKVGYF
                     LAKIYEPFLQPFRKIIPPIGIIDISSIAAIIVLVLFQRGLLQIFNWILIQLQ"
     gene            23904..24710
                     /locus_tag="O6Y56_000898"
     CDS             23904..24710
                     /locus_tag="O6Y56_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002483536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HDB5574177.1"
                     /translation="MVFYNFFKVGINIDIYQHFRQEEYELIDQLTDKCDQAEQHYAPV
                     LTHFLDPRGQYILEVICGSYEDLIVSFYGGLNAERKRAIISPNYYEPKESDFDLTLME
                     IDYPEKFVTLKHQHILGTLMSLGIEREQVGDIIVNERIQFVLTSRLESFIMLELQRIK
                     GASVKLYTIPVTDMIQSNENWKIESATVSSLRLDVVIKEMIRKSRTIAKQLIEKKRVK
                     VNHTIVDSADFQLQANDLISIQGFGRAHITDLGGKTKKDKTHITYRTLFK"
     gene            24734..25351
                     /locus_tag="O6Y56_000899"
     CDS             24734..25351
                     /locus_tag="O6Y56_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HDB5574178.1"
                     /translation="MPFTPNEIKNKEFSRVKNGLEPTEVANFLEQLSTEIERLKEDKK
                     QLEKVIEERDTNIKSYQDVHQSVSDALIQAQKAGEATKQAAEKQAEAIIAKAEAQANQ
                     MVGDAVEKARRLAFQTEDMKRQSKVFRSRFRMLVEAQLDLLKNEDWDYLLNYDLDAEQ
                     VTLENIHHLHENDLKPDEVAANAQNNASNTSDNNQQSNDSETTKK"
     gene            25572..28325
                     /gene="ileS"
                     /locus_tag="O6Y56_000900"
     CDS             25572..28325
                     /gene="ileS"
                     /locus_tag="O6Y56_000900"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDB5574179.1"
                     /translation="MDYKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKN
                     KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE
                     QALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYE
                     AAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFDVKDDK
                     GVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAEALD
                     WDKASIKLEKEYTGKELEYVVAQHPFLDRESLVINGDHVTTDAGTGCVHTAPGHGEDD
                     YIVGQKYELPVISPIDDKGVFTEEGGQFEGMFYDKANKAVTDLLTEKGALLKLDFITH
                     SYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGE
                     WVISRQRVWGVPLPVFYAENGEIIMTKETVNHVADLFAEYGSNIWFEREAKDLLPEGF
                     THPGSPNGTFTKETDIMDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYRGWFNSS
                     ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWVSS
                     TDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLL
                     NRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRS
                     MQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVVEVDQALLDKW
                     RTFMNLRDDVNRALETARNEKVIGKSLEAKVTIASNDKFNASEFLTSFDALHQLFIVS
                     QVKVVDKLDDQATAYEHGDIVIEHADGEKCERCWNYSEDLGAVDELTHLCPRCQQVVK
                     SLV"
     gene            28615..29412
                     /locus_tag="O6Y56_000901"
     CDS             28615..29412
                     /locus_tag="O6Y56_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDB5574180.1"
                     /translation="MYHNSNANFVNGITLNVRDKNELKPFYEDVLGLNIINETLTSIQ
                     YEVGQNNHVITLVELQNGREPLMSEAGLFHIAIKLPQISDLANLLIHLSEYDIPVNGG
                     IQPASLSLFFEDPEGNGFKFYVDKDEAQWTRQNDLVKIDIRPLNVPRLVSHATKLLWL
                     GIPDDAIIGALHIKTIHLSEVKDYYLDYFGLEQSAYMDDYSIFLASNGYYQHLAMNDW
                     VSATKRVENFDTYGLAIVDFHYPETTHLNLQGPDGIYYRFNHIEVED"
BASE COUNT        10789 a         4049 c         5637 g         9141 t
ORIGIN      
        1 caaattttaa tagtaggttg tgtttatttt gtatacgctt acaatttagg tgtaactata
       61 ataaaaggag ttgttattaa tgaaaaattt acgaaacaga agttttttaa ctttattaga
      121 cttttcaaga caagaggtag aattcttatt aacactctcc gaggatttaa aacgtgctaa
      181 atatattggc actgaaaagc ctatgttaaa aaataaaaat attgcactgt tgtttgaaaa
      241 agattctaca agaacgcgat gtgcatttga agttgcagcg catgatcaag gtgcaaatgt
      301 aacttattta ggcccaactg gatcacaaat gggtaaaaaa gaaacaacta aagatactgc
      361 acgtgtgctt ggtggaatgt atgatggcat tgaataccgt ggtttttcac aaagaacagt
      421 agaaacttta gctgaatatt caggcgtacc agtgtggaat ggtttaactg atgaagatca
      481 tcctactcaa gttcttgctg atttcttaac agcaaaagaa gtcttaaaaa aagattatgc
      541 agatattaac tttacatatg ttggagatgg tcgtaataac gttgcaaatg cattaatgca
      601 aggtgctgcc attatgggta tgaacttcca tttagtttgt ccaaaagaat taaatccaac
      661 agatgaatta ttaaatcgct gtaaaaatat tgccgctgaa aatggtggca acatattaat
      721 cacagatgat attgaccaag gtgtaaaggg ttcggatgta atttacactg acgtttgggt
      781 atcaatgggt gaacctgatg aagtatggaa agaacgactt gaattattga agccatatca
      841 agtaaataaa gaaatgatgg ataaaactgg taatccaaat gttatttttg agcattgctt
      901 accatctttc cacaatgctg atacgaaaat tggtcaacaa atttttgaaa aatatggaat
      961 tcgagaaatg gaagttacag atgaagtatt cgaaagtaaa gcttcagttg tattccaaga
     1021 agctgagaac agaatgcata caataaaagc agtcatggtt gctacattgg gtgaatttta
     1081 aatgatataa ggaagtgaat atgatggcga aaatagtagt agcattaggt ggtaatgctt
     1141 taggaaaatc acctcaagaa caactcgagc ttgttaaaaa tactgcgaaa tcattagtag
     1201 gattaataac aaaaggacat gagattgtta ttagtcatgg taatgggcca caggttggaa
     1261 gcattaattt ggggcttaac tatgctgcag aacataacca aggtccggca tttccatttg
     1321 ctgaatgtgg cgcaatgagt caagcttaca tcggctatca attacaagaa agcttacaaa
     1381 acgaattgca ttctattgga atggataaac aagtggtaac actagtgaca caagttgaag
     1441 ttgatgaaaa tgatccggca tttaacaatc cttcaaaacc aattgggtta ttttacaaca
     1501 aagaagaagc tgaacaaatt caaaaagaaa aaggatttat atttgttgaa gatgctggaa
     1561 gagggtatag acgtgttgtt ccttcaccac aacccatctc tattattgaa ttagagagta
     1621 ttaaaacact tattaaaaat gatacactcg ttattgctgc tggtggtgga ggtataccag
     1681 taattagaga gcaacatgat ggttttaaag gtattgatgc agttatagac aaagataaaa
     1741 caagtgcgtt gttgggtgct aatattcaat gcgatcaatt gattatttta acagcaattg
     1801 attatgtata tattaatttt aacactgaaa accaacagcc tttgaaaaca acaaatgttg
     1861 atgaattaaa acgatatata gacgaaaatc aatttgcaaa aggaagtatg ttaccaaaaa
     1921 ttgaagcagc catatcattt attgaaaaca atccaaaagg aagtgtgctt ataacatcat
     1981 taaatgaatt agatgctgcc ttagagggta aagtaggtac tgtgattaaa aagtaattga
     2041 attgaaacgc ttttcaatta ctatatgtca aatgcatgat ttttattatt tatgtgcacc
     2101 cctgaaaata atgcctctat tttgatgcgg ggtgcacttt cttaatttat atttataaaa
     2161 tctttaaggt agaaatgcta ggttaaatgt cgaaggagat gaaaccgtgg aaaatacaat
     2221 taatgaaagt gaaaagaaaa aacgatttaa attaagaatg ccaggtgcat ttatgatttt
     2281 attcatttta acggttgttg cagttatagc aacatgggtt attcctgctg gtgcatattc
     2341 taaactttct tacgaacctt catcccaaga actaaagata gttaaccctc ataaccaagt
     2401 gaaaaaggtt ccaggtacgc aacaggaact agacaaaatg ggggttaaaa ttaagattga
     2461 acaatttaaa tcaggtgcaa ttaataagcc ggtatcaatt ccgaatactt atgaaagatt
     2521 aaagcaacat ccagctggac cagaacaaat aacaagtagc atggttgaag gtacgataga
     2581 agcggtcgat atcatggtat tcattcttgt actaggggga cttattggcg tagttcaagc
     2641 cagtggttct tttgaatcgg gattgttagc tttaacgaag aaaacaaaag ggcatgaatt
     2701 tatgctaatt gtgtttgtat caatactaat gattatcggc gggactttat gtggtattga
     2761 agaagaagct gtagcatttt atccgatttt agtccctata tttatagcgt taggatatga
     2821 ttctatcgtt tcagttggtg ccatattcct tgccagctct gtcggtagta cattttcaac
     2881 tattaacccg ttctcggttg taattgcctc taatgccgct ggtacaactt ttacggatgg
     2941 cttgtattgg agaataggtg cttgtattgt cggtgcgatt tttgttatta gttatttata
     3001 ttggtactgt aaaaaaatta aaaaagatcc taaagcgtca tattcttacg aagacaaaga
     3061 tgcttttgaa cagcaatggt ctgtattaaa agatgacgat agttctcatt ttactttgtg
     3121 taagaagata atccttacat tatttgtact accatttcca attatggtat ggggagttat
     3181 gacgcaaggt tggtggttcc cagttatggc ttcagcattt ttaatattta caattataat
     3241 aatgtttatt gctgggacag gtaaatctgg attgggagaa aaaggaactg tagatgcatt
     3301 tgtcaatggc gcatcaagtt tagtaggtgt atctttaatt attggcttag ctcgaggtat
     3361 taatttagtg ttgaatgaag gtatgatttc agatacaatc ttacactttt catcatcttt
     3421 agttcaacat atgagtggac cattatttat catcgtatta ctatttattt tcttctgttt
     3481 aggttttatc gtgccatcat cttctggatt agcggtatta tcaatgccta tctttgcacc
     3541 actagctgat acagtaggta taccaagatt cgtcatcgtt acgacatatc aatttggtca
     3601 atatgcgatg ttattcttag cgccgactgg acttgttatg gccacactac aaatgttaaa
     3661 catgcgatat tcacattggt tccgatttgt atggccggta gttgcttttg tattgatttt
     3721 cggtggcgga ctactaatta cgcaagtact aatttattca taatttgaaa tgctatatta
     3781 taaaaaatac taatggggtt ttatgcatct cgtaggtttg tagaaatact aaactaagcg
     3841 aggtgcatta ttatttttga ttaagaaaat aatgacggta atgataacac tagtaagtaa
     3901 ttgatacaat gctctattta ataatgatat ttttaaaatt tgtttttaat gtaatgttag
     3961 atctatggta tattatattt atcgtggtaa atatgtattt gctgtaaaca gtttttgtaa
     4021 cacatgacac atttggttgt gaaaatagca tatataaagg atggctataa atgacacatt
     4081 tgacaaaggt tttagataca ctaactggaa tatgcgtagt attattattt agtaaatatt
     4141 ttgtggcgta tgcaaatatg gtgtttgatt ggaagttaag atggtatttg ctagaaaaca
     4201 taccacattt gccaattata ttatttattc tgatgtttat tttcggagta ccttctgaaa
     4261 tgataaaaga taggcaaagg aaaaataacg gtgtttaatt tatcgatatt tagaggtgat
     4321 aaaatttgtc aactattaca aagactaaaa taaaaatctt tattaattat tttattggta
     4381 tattagcctt ggcgtttgct gcttatatat tatttaaata aaggttagag tgaaacgtgt
     4441 ttatgaacta gacgttctag tatagttact acagctttag tcagaaggta tcattgataa
     4501 gatcatatta aatcaaagag gaattgatac acaccaaaaa gaggcaagat tacctgcctc
     4561 ttttttagtt attaaatatg cgtggtaatt ctgggtaata gtgttactga gacgcattac
     4621 gaagaaattt atcttgattt tcctttttta aaaagaagtg aagatatcct ataaagactc
     4681 taagtactat tacagtggct aataacactt cgataaacaa aaggcctttc caaatgactg
     4741 gaaacataag tacaggcaaa ctgttcttta aagcagttgc agagattact aaagggaatg
     4801 tgaaagctga aaatacgggc gaaaaaggtt cttttagtaa tttaggtaat tgtataatga
     4861 tgtaaaaata aaatatttga gctaatagta aaagtataat tacgataaaa gcattcgcct
     4921 taggaaaggc tataacatat gctgcagcga ctaaagaaaa tggtgcacaa attgtcgatg
     4981 tgttcggttt gattgacgtc tgcaatggaa atgcttttaa tcgcttgaaa actataggta
     5041 agacaataca agtagctaca aagccatata ttactgttaa ttgacctatg aaaaaatatc
     5101 cgctaacggg tgccgtcaat cctgcgatag caatgccaat aaaaagtaca gtccacgaag
     5161 gataaacatt ttcaagtgaa aaatctttta aatattttat tgaaaaaata atcatatgcg
     5221 tcataattcc cacaaggcat aaaatccaaa taggcgttat taagctattg ataaaagtta
     5281 tgttactaaa aaatgtattt aaataagtag tacctaaaaa gccagacatg aaaaatgttg
     5341 tgaacactga tgaaactaga gggctgttta attgttcttt cacattatta aaatatttga
     5401 gcatagtaca taaaaggtga atccaaatca agaaagcaaa gattccgcaa acagcgttta
     5461 aagtaagaga taaatctttt aatagattac cgaggcctaa taaccctaag actagtcctg
     5521 acgttactag aggtgctttt tgaagtctca tgatttacaa cctttcttat gtgattttct
     5581 tcactaatta tatcatgata gctatggcct attaataaga agagtgtgta ctattacgtt
     5641 tttagagtat gtatattgga ttgatagaca cataattgac atttaaatct caatattaat
     5701 gatatttgag gtatgctttg ctacctaaat atggaatatg tggaaaagta tttatttaat
     5761 ttaaatgatg attgaagatt tacaaggggg ggtgtacaaa atgagaaatc aaattcaaaa
     5821 actattagac agtgatttga gcagtttaca tatatcgaaa caaacaggag tgccacaaag
     5881 cacaatacac agaatgagaa aaaatgaaag atcattagac aatatgtcat tgaaaaacgc
     5941 tgaactactt tataaatttg ccaatggtat atttagtgat gaagattaag aaaaataatt
     6001 agtgagttaa ataattagaa aaccacgtct cgatggacgt ggttattttt tagatgtata
     6061 taattataat cataagattt cgggtccctg aaaagtccct aaaattttga atagtatcaa
     6121 aatctatagg aataatataa taataaaaat ctctacgtat gcaaatggtg agtgttaaaa
     6181 aatcttggtg tagttttggt gtagttcagg tgtgcagtat agatgaaatt tgagcgcaaa
     6241 attacttaat taaaaatgtg taaacatgta tcaaccgcgt gtcaattgtg tgtcaaaaaa
     6301 ttctaaaatg aataagcaag cttgttttaa ttactgtatt ttcggggctt atgcggggga
     6361 cgttttggtg atgcatcata ctatattact gaaattcaaa acaaaaagag ccccgtaatc
     6421 acgggactct tttgattggt aatgcgtata aaaataccta tagacgtcct gggagggatt
     6481 cgaacccccg accgatggct tagaaggcca ttgctctatc cagctgagct accaggacac
     6541 gtttaacaac acaagaatta ttatatctaa atgaacttaa attagcaata ccttgtaaat
     6601 aaaaaatgtt tatatttttc actattatag agctatttat ctaaaaaggt tcaataagac
     6661 ttaaatacga attcaggcaa cttaattgtg ttaaatacag ttttgaatgc ctaactgtat
     6721 atcttttctc tttaaaatac agttaagtac tttataagat gttgtgcgga taaacaaact
     6781 aattgcatca aatttatttt aaaataacaa caacaaaacg ttaagcgaat aacatttcgg
     6841 tgatttaaaa gctacgcacg tttttgttat cttcaaattt aaattttaag gagtgttttc
     6901 aatggaaggt ttatttaacg caattaaaga taccgtaact gcagcaatta ataatgacgg
     6961 cgcaaaatta ggcacaagca ttgtgagcat cgttgaaaat ggcgtaggtt tactaggtaa
     7021 attattcgga ttctaatttc gatatgttat gtaagtaata agtattattt taaaggtgag
     7081 ggagagattt aaatgactgg actagcagaa gcaatcgcaa atactgtgca agctgcacaa
     7141 caacatgata gtgtgaaatt aggcacaagt atcgtagaca tcgttgctaa cggtgtgggt
     7201 ttactaggta aattatttgg attctaatat aataactaat attctttaaa ataaactggg
     7261 tgagcatact ttaatgttat gcactcagtt tattttattt gcagaaattt gagcctctgt
     7321 taagatttag atacatagac aatataggag atggggaaat tgggatataa aaatattttg
     7381 atagactttg atgatacaat tgttgatttt tatgatgcag aagaatgggc gtttcactat
     7441 atggcgaatg tttttaatca taaagcaaca aaggatgatt ttttaacatt taaaaaaatc
     7501 aatcaccaac attgggaagc ttttcaacaa aataaattaa cgaagtctga agtattatca
     7561 gaacgatttg tgaattactt taaacatcat caaatggaag ttgatgggca tcgtgcagat
     7621 gtgttattta gaaatggatt agcagaagct aaagttaaat actttgatca aacattagaa
     7681 acaattgtcg agttatcgaa acgacatgat ctatatattg ttactaatgg tgtaaccgaa
     7741 acgcaaaaga gaaggttaaa tcagacgccg ttgcataaat atattaaaaa gatatttata
     7801 tctgaggaaa caggttatca aaaacctaat ccggaatttt ttaattatgt ttttaatgat
     7861 attggtgagg atgaaagaca gcactcgatt atagttggag attctttaac atctgacatt
     7921 ttaggtggca tcaatgcggg tatagctact tgctggttta attttagagg atttgatcat
     7981 aatccaggaa ttatacctga ttatgaaatt aattcatgga aacaactaaa tgatattgta
     8041 cgttaagaca aataatttga aaatgattta cttatattag ctaagaaagt aattgtaaaa
     8101 aagacactac gaaaagatgc attttcatgc tcgtagtgtc gaatattatt atcttatggt
     8161 ttccacaata agacatcatg tccctctata tttttagctt ccacatctgt aaatccatga
     8221 tgtaaaaaga aatccttaga atcatttcta ccaatggctt taattggcat attgaaactc
     8281 tttgcaaaat caatcaattc tgaagcgtac cctctgtttt gatattttgg taatacttct
     8341 aacttccata ataatatata atcttcaaaa tctgggaagt agatttcttc gacatcacct
     8401 ttttttagta atgccattct agctcctaat tgatctccga caaatatgcc ataaaatggt
     8461 gaatctgaac ttgcatcaat catttgaccg tttaactcat tgaccatgta taagtctttg
     8521 ttgccaaacg ctctaaagtt ttcgaataat tcatcagttt tgtaattaat ttcaagacgt
     8581 ttgatttcac tcatatttat ctacccctta tttgtttact actattatta tacattaaac
     8641 cacttgtgtt tttcattgat ttgaaaatgt aaaacaatga atattataaa ttttccatga
     8701 ttaaattgat tttcaagccg taaaattgtc aatcaccggt atagacttta tactatagtt
     8761 tgtaatcgcg tacttaagga gaaaaaacat ggactgtaaa gtagttagtt taaatgaaaa
     8821 agatcagttt ataccaaaaa taaagagcag tgaccctgta ataacaggat tatttcaata
     8881 tgatgcagct caacaaacta gttttgaaaa aaggatgtct aaagaaaata atggaagaga
     8941 agcggcatta tcgaatgtta ttcgtgaata tatgagtgat ttaaagcttt caagtgaaca
     9001 agaattaaat atacaacatt tagctaatgg ttcaaaagtt gtgattggtg gacaacaagc
     9061 agggcttttc gggggaccat tgtatacatt ccataaaata ttttcaatca ttactttatc
     9121 taaggaatta acggatacac ataagcaaca agtagtacca gttttttgga ttgcaggaga
     9181 agatcatgat ttcgatgaag tgaatcatac atttgtttat aacgaaaatc atgggtcact
     9241 gcataaggtt aaatatcata caatggagat gccagagacg actgtctcta gatattatcc
     9301 tgataaggct gagttgaaac aaactttaaa aacgatgttc attcatatga aagaaactgt
     9361 tcatacacaa ggtctactgg agatttgtga cagaattatt gaccaatatg actcgtggac
     9421 tgatatgttt aaagcactac tgcatgagac atttaaagca tatggcgttc tatttataga
     9481 tgcgcagttt gagccgttaa gaaaaatgga agcgcctatg tttaaaaaga ttttgaaaaa
     9541 acatcagttg ctcgatgatg cttttagagc aacacaacaa cgtactcgaa atcaaggatt
     9601 gaaggcgatg atacaaacag atacaaatgt tcatttattc ttacatgatg aaaatatgcg
     9661 tcaattagtt tcgtatgatg gtaagcattt taaattaaat aaaacagata agacatatat
     9721 aaaggaagac attataaata ttgcggaaaa tcaacctgaa ttattttcta ataatgtagt
     9781 gacaagacca ttaatggaag aatggctatt taacacggtg gcatttattg gaggaccgag
     9841 tgaaattaag tactgggctg aattaaaaga tgtatttgaa ctatttgatg ttgaaatgcc
     9901 tatcgtgatg ccaaggctta gaattactta tttaaatgac cgtattgaaa aattactttc
     9961 gaaatacaat attccattag aaaaagtgtt agtcgatggt gttgaaggag aaagaagtaa
    10021 gtttattaga gaacaagcat cacatcaatt tattgaaaag gtagaaggta tgattgaaca
    10081 acagcgtcgt ctaaaccaag acttattaga tgaagtggcg gggaatcaaa ataatattaa
    10141 ccttgtgaat aaaaataatg aaattcatat acaacagtat gattatttgt taaaacgtta
    10201 tcttttaaac attgaaagag aaaacgacat cagtatgaag caatttagag aaattcaaga
    10261 aacactccat ccaatgggag gattacaaga aagaatatgg aatccacttc aaattttgaa
    10321 tgattttggg atagatgtgt tcaagccctc cacctatcca ccactttctt acacttttga
    10381 tcatattatt ataaaacctt aatataccaa gggtttagcc cgatttatct taatgataaa
    10441 tcgggcattt ttttgttttt taaaataaat ttcacaaatt ttgtataaat agtggtggat
    10501 agtggggaga tgtggtaaat tatatataag gtgaggtgat aaaaaatgtt catgggagaa
    10561 tacgatcatc aattagatac aaaaggacgt atgattatac cgtccaagtt tcgttatgac
    10621 ttaaatgagc gttttattat cacaagaggc cttgataaat gtttattcgg ttacacgcta
    10681 gacgaatggc aacagattga agagaaaatg aaaaccttac ctatgacaaa aaaagacgca
    10741 cgtaagttta tgcgtatgtt cttctctggt gctgttgaag tagaacttga taagcaaggg
    10801 cgtattaaca tccctcaaaa cttgaggaaa tacgctaatt taactaaaga atgtacagta
    10861 atcggtgttt caaatcgtat tgagatttgg gatagagaaa cttggaatga tttctatgaa
    10921 gaatctgaag aaagtttcga agatattgct gaagatttaa tagattttga tttttaaaat
    10981 ggaggaattg aagtgtttca tcatatcagc gttatgttaa acgaaaccat tgattattta
    11041 aatgtaaaag aaaatggtgt gtacattgac tgtacgctag gtggagcggg acatgccctt
    11101 tatttactaa atcaattaaa tgacgacgga agattaatag cgatcgatca agaccaaact
    11161 gcaattgata atgctaaaga ggtattaaag gatcatttgc ataaggtgac ttttgttcat
    11221 agcaacttcc gtgaattaac tcaaatatta aaagacttaa acattgaaaa agtagatgga
    11281 atttattacg acttgggtgt ttcaagccca caactcgaca ttccagaacg aggattcagt
    11341 tatcaccatg acgcaacatt agacatgcgt atggaccaaa cacaagaact aacagcatat
    11401 gaaattgtta acaattggtc atatgaagcg ttagtgaaga ttttttatcg ctatggcgag
    11461 gagaaatttt caaaacagat agctcgaaga atcgaagcac atcgcgaaca acaaccaata
    11521 acaacaacat tagaattagt tgacattata aaagaaggta ttcctgcaaa agcaagaaga
    11581 aaaggcggac atcctgcaaa acgagtattt caagcactac gaattgcagt gaacgatgaa
    11641 ttgtcagctt ttgaagattc aatagaacaa gcgattgaat tagtgaaagt agacggcagg
    11701 atttcggtaa tcactttcca ttctttagaa gatcgtttat gtaaacaggt gttccaagaa
    11761 tatgaaaaag gtccagaggt accaagagga ttaccagtta taccagaagc atatacacct
    11821 aagttaaagc gtgttaatcg taaaccgatt accgctacag aagaagattt agatgacaat
    11881 aacagagcac gaagcgcgaa attacgtgta gctgaaatac ttaaataagg agcaattaat
    11941 aatggctgta gaaaaagtgt accaaccata tgacgaacaa gtttataata gtataccgaa
    12001 gcaacaacca caaactaagc ccgaaaagaa gactgtttcg agaaaagtgg ttgtacaatt
    12061 aactaaattt gaaaaagttt tatacataac tttgattact gtaattgcta tgttaagtat
    12121 ttatatgcta tctttaaaaa tggatgcgta tgatacgcga ggaaagattg cagatttaga
    12181 ttataaaata gataaacaat caagtgaaaa cagtgcttta caatctgaaa tcaaaaagaa
    12241 ttcttcttat gaacgcatat acgaaaaggc taagaaacag gggatgagcc ttgagaacga
    12301 taatgtaaag gtagtgcgta gtaatggcga agcaaaaaat taaaattaaa aaaaataaaa
    12361 taggggcagt cctacttgtt ggtttattcg gactgctctt ttttatattg gttttaagaa
    12421 tttcatatat catgattact ggacattcta atggtcaaga tttagtcatg aaggcaaatg
    12481 aaaagtattt agttaagaat gcacaacaac cagaacgagg aaagatatat gatcgtaatg
    12541 gtaaagtgct agcagaagat gtagaaagat ataaacttgt tgcagtaata gataaaaagg
    12601 cgagtgccaa ttctaaaaaa cctaggcatg tagttgataa aaaagagact gcaaagaaat
    12661 tatctacagt cattgatatg aagccagagg aaattgaaaa gagacttagt caaaagaaag
    12721 ccttccaaat tgaatttgga cgcaaaggaa caaatttaac gtatcaggac aaattgaaaa
    12781 tagagaaaat gaatttgcct ggtatttctt tattgcctga aacagaacgc ttttatccaa
    12841 atggcaattt tgcatcacac ttaattggta gagctcagaa aaatccggat actggtgaac
    12901 ttaaaggtgc gcttggagtt gaaaagattt ttgatagtta tttaagtgga tctaaaggat
    12961 cattgagata tattcatgat atttggggat atattgcacc aaatactaaa aaagagaagc
    13021 agcctaaacg tggtgatgat gtccatttaa caatcgattc aaatattcaa gtatttgttg
    13081 aagaagcttt agatggcatg gttgaaagat accagccgaa agatttattt gcggttgtca
    13141 tggatgccaa aactggagaa attttagcat acagtcagcg accaacattt aatcctgaaa
    13201 ctggtaaaga ctttggtaaa aagtgggcaa atgacctata tcaaaacaca tacgagcctg
    13261 gatcaacatt taaatcatat gggttagcag ctgctattca agaaggtgtt tttgatcctg
    13321 ataagaaata taaatctgga catagagata ttatgggttc acgtatttca gactggaata
    13381 gagtcggttg gggtgaaatc ccaatgtcac tcggatttac ttattcatct aatacattga
    13441 tgatgcattt acaagattta gttggtgcag acaaaatgaa atcttggtat gaacgatttg
    13501 gatttggaaa atcaactaaa ggtatgtttg atggagaagc acctggtcaa attggatgga
    13561 gtaatgagtt gcaacaaaaa acgtcatcat ttggtcaatc gacaactgta acacctgttc
    13621 aaatgttaca agcgcaatca gcgttcttta atgatggtaa tatgttaaaa ccatggtttg
    13681 tgaatagcgt tgaaaatcct gttagtaaaa gacaatttta taaaggtcaa aaacaaatcg
    13741 caggcaaacc aataacaaaa gatactgctg aaaaagttga aaagcaattg gatttagttg
    13801 tgaatagtaa gaagagtcac gctgcaaact atcgtattga tggttatgat gtcgaaggta
    13861 agactggtac agcacaagtc gctgcaccta atggtagtgg atacgtaaaa ggtccaaacc
    13921 catattttgt aagttttatg ggtgacgcgc cgaagaaaaa tcctaaagtt attgtatacg
    13981 ctggtatgag cttggcacaa aaaaatgacc aagaagctta tgaattaggt gttagtaaag
    14041 cgtttaaacc aataatggaa aatactttga aatatttaaa tgtaggtaaa tcaaaagatg
    14101 acacatctaa tgcagagtat agtaaagtgc cagatgttga aggtcaagac aaacaaaaag
    14161 ctattgataa tgtgagtgca aaatcattag aaccagttac tatcggttct ggcacacaaa
    14221 taaaagcaca atctataaaa gcagggaata aagtcttacc tcacagtaaa gtactgttat
    14281 taacagatgg agacttaact atgcctgaca tgtcaggatg gacgaaagaa gatgtcattg
    14341 cttttgaaaa cctaacaaat attaaagtga atttaaaagg tagcggtttt gtgtcccacc
    14401 aatcaataag taagggacaa aaacttactg aaaaagataa aatagacgta gaattttcat
    14461 cagagaatgt agacagcaat tcgacgaata attctgattc aaattcagat gataagaaga
    14521 aatctgacag taaaactgac aaggataagt cggactaaca agaatggcta cattaaataa
    14581 ggatgtattg tcactatttg tttttactaa agtaatgctg tgatagaaaa caacatcttc
    14641 atttaatctt tataaataag tgtcgataga gaattttaag gtagacgagg tcagattaac
    14701 ttgtttgtta taggcaaact ttttatactg gcctcttatg ccgtaaaaaa gaagaattat
    14761 aaattttgat tacaactttg tttatttaat tgaaaaattg ataatatatt agtggttaaa
    14821 aaagtctgga ttaagaagag gagatagtta tgatttttgt atatgcgtta ttagcgctag
    14881 tgattacatt tgttttggta cctgttttaa tacctacatt aaaaaggatg aaatttggtc
    14941 aaagtattcg agaagaaggc ccacaaagcc atatgaagaa gactggtaca ccaacgatgg
    15001 gtggactaac atttctatta agtattgtga taacgtcttt ggtggctatt atatttgtag
    15061 atcaagctaa tccaatcata ctgttattat ttgtgacgat tggttttggg ttaattggtt
    15121 ttatagatga ttatattatt gttgttaaaa agaataacca aggtttaaca agtaaacaga
    15181 agtttttggc gcaaattggt attgcgattg ttttctttgt tttaagtaat gtatttcatt
    15241 tggtgaattt ttctacgagc atacatattc catttacgaa tgtagcaatc ccactatcat
    15301 ttgcatatgt tattttcatt gttttttggc aagtaggttt ttctaatgcg gtaaatttaa
    15361 cagatggttt agatggatta gcaactggac tgtcaattat cggatttaca atgtatgcca
    15421 tcatgagctt tgtgttagga gaaacggcga ttggtatttt ctgtatcatt atgttgtttg
    15481 cacttttagg atttttacca tataacatta accctgctaa agtgtttatg ggagatacag
    15541 gtagcttagc tttaggtggt atatttgcta cgatttcaat tatgcttaat caggaattat
    15601 cattaatttt tataggttta gtattcgtaa ttgaaacatt atctgttatg ttacaagtcg
    15661 ctagctttaa attgactgga aagcgtatat ttaaaatgag tccgattcat catcattttg
    15721 aattgatagg atggagcgaa tggaaagtag ttacagtatt ttgggctgtt ggtctgattt
    15781 caggtttaat cggtttatgg attggagtgc attaagatgc ttaattacac agggttagaa
    15841 aataaaaatg tattagttgt cggtttggca aaaagtggtt atgaagcagc taaattatta
    15901 agtaaattag gtgcgaatgt gactgtcaat gatgggaaag acttatcgca agatgctcat
    15961 gcaaaagatt tagaatctat gggcatttct gttgtaagtg gaagtcatcc attaacatta
    16021 cttgataata atccaataat tgttaaaaat cctggaatac cttatacagt atctattatt
    16081 gatgaagcag tgaaacgagg tttgaaaatc ttaacagaag ttgagttaag ttatctaatc
    16141 tctgaagcac caatcatagc tgtaacgggt acaaatggta aaacgacagt tacttctcta
    16201 attggagata tgtttaaaaa aagtcgctta actggaagat tatccggcaa tattggttat
    16261 gttgcatcta aagtagcaca agaagtaaaa cctacagatt atttagttac agagttgtcg
    16321 tcattccagt tacttggaat cgaaaagtat aaaccacata ttgctataat tactaacatt
    16381 tattcagcgc atctagatta ccatgaaaat ttagaaaact atcaaaatgc taaaaagcaa
    16441 atatataaaa atcaaacgga agaagattat ttgatttgta attatcatca aagacaagtg
    16501 atagagtcgg aagaattaaa agctaagaca ttgtatttct caactcaaca agaagttgat
    16561 ggtatttata ttaaagatgg ttttatcgtt tataaaggtg ttcgtattat taacactgaa
    16621 gatctagtat tgcctggtga acataattta gaaaatatat tagcagctgt gcttgcttgt
    16681 attttagctg gtgtacctat taaagcaatt attgatagtt taactacatt ttcaggaata
    16741 gagcatagat tgcaatatgt tggtactaat agaactaata aatattacaa tgattccaaa
    16801 gcaacaaaca cgctagcaac acagtttgcc ttaaattcat ttaatcaacc aatcatttgg
    16861 ttatgtggtg gtttggatcg agggaatgaa tttgacgaac tcattcctta tatggaaaat
    16921 gttcgcgcga tggttgtatt cggacaaacg aaagctaagt ttgctaaact aggtaatagt
    16981 caagggaaat cggtcattga agcgaacaat gtcgaagacg ctgttgataa agtacaagat
    17041 attatagaac caaatgatgt tgtattattg tcacctgctt gtgcaagttg ggatcaatat
    17101 agtacttttg aagagcgtgg agagaaattt attgaaagat tccgtgccca tttaccatct
    17161 tattaaaggg tgtgagtatt gatggatgat aaaacgaaga acgatcaaca agaatcaaat
    17221 gaagataaag atgaattaga attatttacg aggaatacat ctaagaaaag acggcaaaga
    17281 aaaagatcaa aggctacaca tttttctaat caaaataaag atgatacatc tcaacaagct
    17341 gattttgatg aagaaattta cttgataaat aaagacttca aaaaagaaga aagcaatgat
    17401 gaaaataatg attctgcttc tagtcatgcg aataataata atatcgatga ttctacagac
    17461 tctaataatg aaaatgagga ttatagatat aatcaagaaa ttgacgacca taatgaatcg
    17521 aatggaattg cagtcgacaa cgaacaacct caatcagctc ctaatgaaca aaatagcgac
    17581 ttgaatgatg aggaaacagt aacgaaaaaa gaacgaaaaa gcaaagtaac acaattaaaa
    17641 ccattaacac ttgaagaaaa gcggaagtta agacgtaagc gacaaaagcg aatccaatac
    17701 agtgttatta caatattggt attgttgatt gctgttatat taatttacat gttttcacca
    17761 cttagtaaaa ttgcgcatgt aaatataaat ggaaataatc acgttagtac ttcaaagata
    17821 aacaaagttt taggtgttaa aaatgattca aggatgtata cgtttagtaa aaaaaatgct
    17881 attaatgatc tcgaagagga tccattaatc aaaagtgttg agatacacaa gcaattacca
    17941 aacacattaa acgtagatat cacagaaaat gaaattattg ctttagtgaa atataaaggt
    18001 aaatatttac ctttattaga aaatggtaaa ttgcttaaag gttcaaatga tgtcaaaatt
    18061 aatgatgcac ctgtcatgga tggtttcaaa ggtacaaaag aagatgatat gattaaggcg
    18121 ttatctgaaa tgacacctga agttagacga tatattgccg aagtgacata cgccccaagt
    18181 aaaaacaaac aaagcagaat tgaattgttt acgacggatg gacttcaagt aatcggtgat
    18241 atttcgacga tatctaagaa aatgaaatat tatccgcaga tgtcacaatc attatcaaga
    18301 gatagttcgg gtaaactaaa aacacgaggc tatattgatt tatcagtcgg tgcttcattt
    18361 atcccatacc gtggaaacac gtctactcaa tcagaaagcg ataaaaatgt gactaaatca
    18421 tctcaagagg aaaatcaagc aaaagaagaa ttacaaagcg ttttaaacaa aattaacaaa
    18481 caatcaagta agaataatta aaaaattttg atattgtcta tgtttatagt tcacaagcca
    18541 ttcaacgtat tgtaaactaa agatagtgta ttttttaata gtaatttgtc aggaggtgcc
    18601 tatctatgga agaacattac tacgtaagta ttgatattgg atcatcaagc gtaaaaacaa
    18661 tagtaggcga gaaatttcac aatggtataa atgtgatagg tacaggacaa acctacacga
    18721 gcggtataaa aaatggttta attgatgatt ttgatattgc gcgtcaagca atcaaagaca
    18781 caattaaaaa ggcatcaatc gcttcgggtg ttgatattaa agaagttttc ctgaaattac
    18841 ctatcattgg aacggaagtt tatgatgaat caaatgaaat cgacttttat gaggatacag
    18901 aaatcaacgg ttcacatatc gaaaaagtat tagaaggtat tagagaaaaa aatgatgtgc
    18961 aagaaacaga agtaattaat gtgttcccga ttcgttttat agtcgataaa gaaaatgagg
    19021 tttcagaccc taaagaatta attgccagac attcattaaa ggttgaagca ggcgtaattg
    19081 ctattcaaaa atcgatttta attaatatga ttaaatgcgt tgaagcatgt ggtgttgatg
    19141 tattagatgt ttattctgat gcatataact acggttcaat cctaacagct actgaaaaag
    19201 agttaggtgc atgtgtcatt gatattggtg aagacgttac gcaagttgct ttttatgaac
    19261 gcggtgaatt agtagatgct gattctatcg aaatggcagg gcgtgatatt acagacgata
    19321 ttgcacaagg gttaaacact tcttatgaaa ctgctgaaaa agttaaacac caatacggtc
    19381 atgcattcta tgattctgct tcagatcaag atatcttcac tgttgaacag gttgatagtg
    19441 atgaaacagt acagtatact caaaaagatt tgagtgactt tattgaagcg cgtgtagaag
    19501 aaatattctt cgaagtattt gatgttttac aagatttagg attaacaaaa gtaaatggtg
    19561 ggtttattgt aactggtgga tctgcaaact tacttggcgt aaaagaatta ttatcagata
    19621 tggtaagtga aaaagttaga attcacacgc catcacaaat gggaattaga aaacctgaat
    19681 tttcttcagc aatttctaca atttctagta gtatcgcttt tgatgagtta ttagattatg
    19741 ttacaattaa ttatcatgat aatgaagaaa ctgaagaaga tgttattgat gtgaaagaca
    19801 aagataacga atctaaatta ggcggatttg attggtttaa acgtaaaaca aacaaaaaag
    19861 atactcatga aaatgaagta gagtctacag atgaagaaat ttatcaatca gaagataatc
    19921 atcaggaaca taaacagaat catgaacatg ttcaagacaa agataaagaa gaaagtaaat
    19981 tcaaaaaact aatgaaatct ctatttgaat gattattggc caataaaact aggaggaaat
    20041 ttaaatgtta gaatttgaac aaggatttaa tcatttagcg actttaaagg tcattggtgt
    20101 aggtggtggc ggtaacaacg ccgtaaaccg aatgattgac catggaatga ataatgttga
    20161 atttatcgct atcaacacag acggtcaagc tttaaactta tctaaagctg aatctaaaat
    20221 ccaaatcggt gaaaaattaa cacgtggttt aggagcagga gctaatcctg aaatcggtaa
    20281 aaaagctgca gaggaatctc gtgagcaaat tgaagatgca atccaaggtg cagacatggt
    20341 atttgttact tctggtatgg gtggcggaac tggtactggt gcagcaccag tcgttgctaa
    20401 aattgcaaaa gaaatgggcg cattaactgt tggtgttgta actcgtccat ttagttttga
    20461 aggacgtaaa cgtcaaactc aagctgctgc tggagtagaa gctatgaaag ctgcagtaga
    20521 tacattaatc gttataccaa atgaccgttt attagatatc gttgacaaat ctacgccaat
    20581 gatggaagca tttaaagaag ctgacaacgt gttacgccaa ggtgtacaag gtatctcaga
    20641 cttaatcgct gtttctggtg aagtaaactt agactttgca gacgttaaga caattatgtc
    20701 taaccaaggt tctgcattaa tgggtattgg tgtttcttct ggtgaaaata gagcggtaga
    20761 agctgctaaa aaagcaatct cttctccatt acttgaaaca tctatcgttg gtgcacaagg
    20821 tgtgcttatg aatattactg gtggcgagtc attgtcatta tttgaagcac aagaggctgc
    20881 tgatattgtc caagatgctg cagatgaaga cgttaatatg attttcggta cagttattaa
    20941 tcctgaatta caagatgaga ttgttgtaac agttattgca actggttttg atgacaaacc
    21001 aacatcacat ggtcgtaaat ctggtagcac tggattcgga acaagcgtaa atacttctag
    21061 caatgcaact tctaaagatg aatcattcac ttcaaattca tcaaatgcac aagcaactga
    21121 tagtgtaagt gaaagaacac atacaactaa agaagatgat attcctagct tcattagaaa
    21181 tagagaagaa agacgttcaa gaagaacaag acgttaatcg gttaatatat atacacaaat
    21241 aattcaacac aaatcatcag ataacatatc tgatgatttt tttactaatt ttagaacatg
    21301 tagaaggaca tttaagtttt tcgaagtcat taaaagtgtt taagtatcgt gtcaaaatta
    21361 agtcaaaaat tatttgcgca acattttaac tttaaacata aatgttatat tatataatta
    21421 ttaactttgt acagttagac gaagataatt taaatgaaat gatggtgacg atcgagtgaa
    21481 tgataatttt aaaaagcaac cgcatcattt aatatatgaa gaattattac aacaaggtat
    21541 tactctaggt attacaacta gaggcgatgg tttaagtgac tatcctaaaa attcttttaa
    21601 tatggcgaga tatattgatg atcgcccata taatattact caacatcaat tgcaattagc
    21661 tgaagaaatt gcgtttgata gaaaaaattg ggtgtttccc atccaaacac atgaaaataa
    21721 agtcgcttgt ataacaaagg atgatatagg cacaaatata gacactttaa ctgatgcgct
    21781 tcatggtatt gatgcgatgt acacatatga tagtaatgtc ttattaacga tgtgttatgc
    21841 agactgtgta ccagtatatt tttatagtac aaaacatcat tttattgcat tggcgcatgc
    21901 agggtggcgt ggtacctata ctgaaattgt aaaagaagtg ctaaaacatg tgaactttga
    21961 tttgaaagac ttacatgttg ttattggacc atctacatca ccaagttatg aaattaatga
    22021 tgatattaaa aataaatttg aaacattgcc aattgatagt gcaaactata ttgaaactag
    22081 aggacgagat cgtcatggta ttgatttgaa aaaagccaat gctgcattat taaataatta
    22141 tggtgttcct aaagaaaata tttatacgac agcgtatgct acatctgaac atttagaatt
    22201 atttttctct tatcgattag aaaaaggtca aacaggacgc atgttagcat tcattggtca
    22261 acagtaaaca aggaggagat atgcttgcgt gtgaaagata atttacaaca aatctcaaca
    22321 caaattaatg acaaaagtga aaaaaataat ttttcaacaa aaccaaacgt gattgcagtt
    22381 acaaaatatg ttacaataga gcgagctaaa gaagcgtatg aggctggaat aagacatttt
    22441 ggtgagaata gattggaagg cttttttcaa aagaaagaag cattaccatc agatgcggtg
    22501 atccatttta taggatcatt acaatctcga aaagttaagg acgttataaa cgacgtagat
    22561 tatttccatg ctttagatcg attgagctta gccaaagaaa ttaacaaacg tgcagaacat
    22621 aaaattaaat gtttcttgca agtgaacgtt tcgggagaag cttctaaaca tggtattgct
    22681 ttagaagatg ttgatcagtt tatagatgat cttaaaaaat atgacaaaat cgaaattgta
    22741 ggtttaatga cgatggcacc attgacagat gatgaagcat atattagatc gttatttaaa
    22801 cagttacgtt tgaaaaaaga agaaatacaa cgactcaatt tagaatatgc gccttgtgat
    22861 gaattatcaa tgggaatgag taatgactat cttattgcag ttgaagaagg tgcaacgttt
    22921 gttagaattg ggactaaact tgtaggagaa gaggagtgag ccacttggct ttaaaagatt
    22981 tatttagtgg attttttgta atagatgatg aagaggaagt agaagtacct gacaaacaac
    23041 agcaggtaaa tgaagcgcca gcaaaagagc agtcacaaca aacaacaaaa caaaacgcaa
    23101 tcaaatcagt ccctcaaaaa tctgcatcaa gatatacaac aacgtcagaa gaaaggaata
    23161 accgtatgtc taattattca aaaaataatt cacgtaatgt tgtaactatg aacaatgcta
    23221 caccaaacaa tgcatcacaa gaaagttcaa aaatgtgttt attcgaacca cgtgtttttt
    23281 cagatacaca agatattgct gatgagctta aaaaccgccg agcgacactt gtcaatttac
    23341 aacgtattga taaagtatca gcgaaaagaa ttattgattt tttaagcggt actgtttatg
    23401 caatcggtgg agatatccaa cgtgtaggta ctgatatttt cttatgtacg cctgataatg
    23461 tggaagtagc tggaagcatt acagaccata ttgaaaatat ggaacattca ttcgactaag
    23521 gagttaacat atggatataa atgtgctagc tacaatattt aaatttatcc tttttgttgt
    23581 tgaaatttat tatttcggca tgattatata tttctttaca tcttgggtac caagtattag
    23641 agaaactaag gtaggttatt ttttagcgaa aatatatgaa cctttcttac aaccatttag
    23701 aaagataatt ccacctattg gaattatcga catatcatca atcgctgcaa ttatcgtttt
    23761 agtattattc caaagagggt tactccaaat ctttaattgg attttaattc aattacaata
    23821 aattaagcga cataacgagg caagggtaca tgatacttta gcctcgtttt tgatatgtat
    23881 ttttctgaat ataagggcaa tagatggtat tttataattt ttttaaggta gggattaaca
    23941 tagatattta tcaacacttt agacaggaag aatacgaatt aattgatcag ctaacggata
    24001 aatgtgatca agcggaacag cattatgcac cagtattaac gcatttttta gatccaagag
    24061 ggcaatatat attggaagtg atttgtggca gttatgaaga tttaatcgta tctttttatg
    24121 gcgggctaaa tgctgaaaga aaaagagcaa tcatttcgcc gaactattat gaacctaaag
    24181 aaagtgactt tgatttaact ttaatggaaa tagattatcc tgaaaaattc gtcactttaa
    24241 aacatcaaca tattttaggg acattaatgt ctttaggtat cgaacgcgaa caagttggag
    24301 atataattgt gaatgaacga attcaatttg ttttgacaag tagattggaa tcatttatta
    24361 tgttagaatt acaacgtatt aaaggcgcat cagttaaact ttatactatt ccagtaacag
    24421 atatgataca atctaatgag aattggaaaa ttgaaagtgc aacagttagt tctttaaggt
    24481 tagatgttgt tattaaagaa atgatacgta aatcacgtac gattgcgaaa caactaatcg
    24541 aaaaaaaacg tgttaaagtg aatcacacta ttgttgattc agcagatttt caattacaag
    24601 caaatgattt aatatccatc caaggttttg gtagagcaca cattactgac ttaggtggta
    24661 aaactaaaaa agataaaacg cacattacct atagaacatt attcaaatag taatgattta
    24721 aggaggataa caaatgcctt ttacaccaaa tgaaattaag aataaagagt tttcacgtgt
    24781 aaagaatggt ttagaaccta ctgaagttgc taattttttg gagcaactaa gcactgaaat
    24841 tgaacgtctt aaagaagata aaaaacaact tgaaaaagta atcgaagaga gagatactaa
    24901 tattaagtct tatcaagacg tgcatcaatc tgtaagtgat gctttgatac aagctcaaaa
    24961 agctggtgaa gcaactaagc aagctgcaga gaaacaagct gaagcgatta tagctaaggc
    25021 agaagcgcaa gctaatcaaa tggttggtga tgcggtagaa aaagcacgcc gtttagcatt
    25081 ccaaactgaa gatatgaaac gtcaatcaaa agtatttaga tcgcgtttcc gtatgttagt
    25141 tgaagcgcaa ttagacttat taaaaaacga agattgggat tacttgttga attatgattt
    25201 agacgctgaa caagtgacac ttgaaaatat tcatcattta catgaaaatg atttaaagcc
    25261 agatgaagtt gcagcaaatg cacaaaataa tgcatcaaat acatcagaca ataatcaaca
    25321 atccaatgat tcagaaacaa ctaagaagta agaattaaat aaagacagac gcgtaatata
    25381 catttaactt ttcacagcga attaggtaat ggtgagagcc tagtaaaagc atgtatgtta
    25441 tatcactggc tttttaatat ttaaataatg taatgagaga actctaagtt gagttaataa
    25501 gggtggtacc gcgagaaatc gtccctttta atttaactta gagtttttta aatttttaag
    25561 gagtgaaaaa aatggattac aaagaaacgt tgttaatgcc taaaacagat ttcccaatgc
    25621 gaggtggttt accaaacaag gaaccgcaaa ttcaagaaaa atgggatgca gaagatcaat
    25681 accataaagc gttagaaaaa aataaaggta acgaaacatt cattttacat gatggcccac
    25741 catacgcgaa tggtaactta catatgggac atgccttgaa caaaatttta aaagacttta
    25801 ttgtacgtta taaaactatg caagggttct atgcaccata cgtaccaggt tgggatacac
    25861 atggtttacc aattgaacaa gcattaacga aaaaaggtgt tgaccgtaag aaaatgtcaa
    25921 cagctgaatt ccgtgagaaa tgtaaagaat ttgctttaga acaaattgaa ttacagaaaa
    25981 aagattttag acgtttaggt gtgcgtggtg actttaatga tccatatatt acattaaaac
    26041 ctgaatacga agctgcacaa attcgtattt ttggagaaat ggcagataaa ggtttaattt
    26101 ataaaggtaa aaagccagtt tattggtctc cttcaagtga gtcttcatta gcagaagcag
    26161 aaattgaata tcacgataaa cgttcagcat caatttacgt tgcatttgac gttaaagatg
    26221 acaaaggtgt cgttgatgca gatgctaaat ttattatctg gacaacaacg ccatggacaa
    26281 ttccatcaaa tgttgcgatt accgttcatc ctgaattaaa atatggtcaa tacaatgtaa
    26341 atggcgaaaa atatattatt gcagaagcct tatctgacgc tgtagcagaa gcactggatt
    26401 gggataaagc atcaatcaaa ttagaaaaag aatacacagg taaagaattg gagtatgttg
    26461 tagcacaaca tccattctta gatagagaat cgttagtgat taatggtgat catgttacta
    26521 cagatgctgg tacaggttgt gtacatacag caccaggtca cggggaagat gactatattg
    26581 ttggtcaaaa atatgaatta ccagtaatta gtccaatcga tgataaaggt gtatttactg
    26641 aagaaggcgg ccaatttgaa ggaatgttct atgataaagc taataaagcc gttactgatt
    26701 tattaacaga aaaaggtgca ctattaaaat tagactttat tacacatagc tatccacacg
    26761 actggagaac aaaaaaacct gtaatcttcc gtgctacacc acaatggttt gcttcaatca
    26821 gtaaagtaag acaagatatt ttagatgcaa tcgaaaatac aaacttcaaa gtaaattggg
    26881 gtaaaacacg tatttacaat atggttcgtg accgtggcga atgggttatt tctcgtcaac
    26941 gtgtttgggg tgtaccgtta ccagtatttt atgctgaaaa tggcgaaatt atcatgacga
    27001 aagaaacagt gaatcatgtt gctgatttat ttgcagaata cggttcaaat atttggtttg
    27061 aaagagaagc gaaagactta ctaccagaag gatttacaca tccaggcagc cctaacggta
    27121 catttactaa agaaacagac attatggacg tttggtttga ttctggttca tcacaccgtg
    27181 gcgtgttaga aacaagaccg gaattaagtt tcccagcaga tatgtattta gaaggtagtg
    27241 accaatatcg tggttggttc aactcttcta ttacaacttc agttgctaca agaggagtgt
    27301 caccttataa attcttactt tctcatggtt ttgttatgga cggtgaaggt aagaaaatga
    27361 gtaaatcttt aggtaatgtg attgtacctg accaagtggt taaacaaaaa ggtgctgata
    27421 ttgcgagact ttgggtaagt agtacggact atttagctga tgttagaatt tctgatgaaa
    27481 ttttaaaaca aacatctgat gtttatcgta aaatcagaaa tacattaaga tttatgttag
    27541 gtaatattaa tgatttcaat cctgatacag atagcattcc tgaatcagag ttattagaag
    27601 ttgatcgtta cttgctaaat cgtttacgtg aatttactgc aagtacgatt aacaactatg
    27661 aaaactttga ctacttaaat atttatcaag aagttcaaaa ctttatcaat gttgagttga
    27721 gtaatttcta tttggattat ggtaaagata ttttatatat tgaacaacgt gattctcata
    27781 tccgtcgtag tatgcaaaca gtgttatatc aaattttagt tgatatgacg aagttgttag
    27841 caccaatctt agtgcataca gctgaagaag tttggtctca tacaccacat gttaaagaag
    27901 aaagtgttca cttagcagac atgcctaaag ttgtagaagt agatcaagct ttattggata
    27961 aatggcgtac atttatgaat ttacgtgatg atgtgaatcg tgcattagaa actgctcgta
    28021 atgaaaaagt tattggtaaa tcattagaag ctaaagttac gattgctagt aacgataaat
    28081 ttaatgcatc tgaattctta acttcatttg atgcattaca tcaattattt atcgtgtcac
    28141 aagttaaagt tgtagataag ttagatgatc aggcaacagc ttatgaacat ggtgatattg
    28201 tcatcgaaca tgcagatggt gaaaaatgtg aaagatgttg gaactattca gaggatcttg
    28261 gtgctgttga tgaattgacg catctatgtc cacgttgcca acaagttgta aaatcacttg
    28321 tataattgaa attgtataaa gtactcatac agatgatata aattaaagct ctcttcataa
    28381 tcatgttgta gtttttgttg acatgatgaa gagagttttt ttgcgaataa aaaatgaccg
    28441 agttactggt tatatgtgta aaaaaatgtg tgatttacta aaataaaaat tattcaggaa
    28501 tggtacaaat tctctgaagc ttataaatgc gttatagttg ctattctcaa ttatgttcgc
    28561 gataatttta agtaaaagta agcacagata ttgaatttga taggagttaa ttgaatgtat
    28621 cataacagta acgcaaactt tgtaaatggt atcactttaa atgtaagaga taagaatgaa
    28681 ttaaagccat tttatgagga cgtattagga ttaaatatta taaatgagac attaacatcg
    28741 atacaatatg aagtaggtca aaataatcat gtcattacac ttgttgaatt acaaaatgga
    28801 cgtgaacctt taatgtcaga agcgggactg tttcatatcg caattaaact acctcaaatt
    28861 agtgatttag ctaatttact aattcattta agcgaatatg atattccagt taacggaggt
    28921 atacagcctg cttcgttatc attatttttt gaagacccgg aaggaaacgg ttttaaattt
    28981 tatgttgata aagacgaagc gcaatggacg aggcaaaatg atttagtaaa aattgatatt
    29041 agaccattaa atgtaccgag attagtgagt catgcaacaa aattgttatg gttaggtatt
    29101 ccagatgacg ctattatagg tgcgttgcat attaagacaa ttcatttatc agaggtaaaa
    29161 gactactacc tcgattattt tggattagag caatcagcat atatggatga ttattcaata
    29221 tttttagcat cgaatggcta ttatcaacat ttggccatga atgattgggt atcagcaacg
    29281 aaacgtgtag aaaattttga tacgtatgga ttagcaattg ttgactttca ttatcctgaa
    29341 acaacacatt taaatttaca aggtccggat ggtatctatt atcgctttaa tcatatcgaa
    29401 gttgaagatt agtatatact ttgaatggac gaaccatata atgaatcgtt tttaatgatc
    29461 tttttataca agttatgaag gagcttgaga cattaagttc ttaggcaatg taaaaagctg
    29521 atttctatta attatttgat agaaatcagc ttttttgata tgtattttat aatgtacagc
    29581 tcgttgagct gctattttcc ttatattaag tgccat
//
LOCUS       DALMNS010000025        28623 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.025, whole genome shotgun sequence.
ACCESSION   DALMNS010000025 DALMNS010000000
VERSION     DALMNS010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 28623)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28623)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28623
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.025"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(118..894)
                     /locus_tag="O6Y56_000902"
     CDS             complement(118..894)
                     /locus_tag="O6Y56_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000739218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosaminidase"
                     /protein_id="HDB5574181.1"
                     /translation="MKKNFKLRISTLLLIVILVVFAVLLIVNETKLFKNDVNYSFDEA
                     VSMQQGKGIVQTKEEDGKFVEANNNEIAKAMTISHKDNDMKYMDITEKVPMSESEVNQ
                     LLKGKGILENRGKVFLEAQEKYEVNVIYLVSHALVETGNGKSELAKGIKDGKKRYYNF
                     FGIGAFDSSAVRSGKSYAEKEQWTSPDKAILGGAKFIRNEYFENNQLNLYQMRWNPEN
                     PAQHQYASDIRWADKIAKLMDKSYKQFGIKKDDIRQTYYK"
     gene            complement(916..1149)
                     /locus_tag="O6Y56_000903"
     CDS             complement(916..1149)
                     /locus_tag="O6Y56_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574182.1"
                     /translation="MLKTSAVISNTLLVIGLVCLFMMKLVLAITFFAVSLSISLVVFN
                     MMFRDRTTMKVIVNASFLIVILAIVVAYFLLSK"
     gene            complement(1444..1917)
                     /locus_tag="O6Y56_000904"
     CDS             complement(1444..1917)
                     /locus_tag="O6Y56_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1641 domain-containing protein"
                     /protein_id="HDB5574183.1"
                     /translation="MAERISSKIRRLEKSEEQIKLESLNEVTEAIAANKDSILKAIKL
                     IKVLDDAKILDALNGAVRGRQVIINKFAVELNKDIYTGLLTNMASMVFLLGELNVSDL
                     SDFLNKVNKGLHVANQASPNAKTSVRSLLGVLKDDDMNRSLTYMLNMLKGMSRED"
     gene            complement(1917..4871)
                     /gene="fdhF"
                     /locus_tag="O6Y56_000905"
     CDS             complement(1917..4871)
                     /gene="fdhF"
                     /locus_tag="O6Y56_000905"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HDB5574184.1"
                     /translation="MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGP
                     IQTCDTCTVEIDGKIERSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVC
                     DYNNGDCEIHNTMDAWGLQHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDI
                     EVNETIRIDWDREHPRVIWDNDVPINESSCVSCGQCATVCPCNAMMEVNMEGNAGYMT
                     DTEPGSLAAMIDLTKKAEPGYGPLFAISDSEAEMRKERIKKTKTVCTYCGVGCSFEVW
                     TKDREILKVQPSHDSPANKIATCVKGKFSWAHINSDQRLTKPLVRKNGEFHEVEWDEA
                     LNVIADNFTSIKEKYGPDALSFISSSKATNEESYLMQKLARQVIGTNNVDNCSRYCQA
                     PATKGLFRTVGHGGDSGSIEDLEKAAMSVLIGTNTAEAHPVIASRMKRAQKLFGQKIH
                     VFDIRKHEMAERADRFYQPKPGTDLAWLSAVTKYIIDHDLHDKAFIEEWVEDFDEYYK
                     SLEIFTMAFAEEATGIPEAELIKFAEECAKAESVVICWAMGITQQDIGSDSSTAISNL
                     LLVTGNYRRPGTGAYPLRGHNNVQGCSDMGSMPDKITGYQSIEADDIRAKFEKEYGVK
                     LNPKVGKDNHEMVEGVHDGEIHSLYLYGEDTGIVDSNINFVQAAFEKLDFMVVQDEFL
                     TFTATFADVVLPASPSLEKDGTFTNTERRIQRLYQALKPLGDSKPDWKIFQAIANKLG
                     FDWNYKHPSEIMDEIARLTPLYAGVSYERLEGFNSLQWPVHPDGTDEPILYLEGFNFD
                     NGKAKLFPLSFDNYFKQDEVYDIHVNNGRLLEHFHEGNMTYQTPMIKYKVPRAFVEIS
                     PELAEDRGIHEGAEVKLISETGEAVLQVHVTDRVKGKEIYIPLNNDAMENGDLGAINL
                     LTNSDVDQYTDTPSYKRTSCRLEVITKRGKSPLNPNNFRVNKKRHPQYSVQVQKKWER
                     PDYVFPGNQVDK"
     gene            complement(5473..6420)
                     /locus_tag="O6Y56_000906"
     CDS             complement(5473..6420)
                     /locus_tag="O6Y56_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000830946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HDB5574185.1"
                     /translation="MKRSSKSKMSLPKKIFLWVFGILVILAFVAVVYVAAKIFITGNK
                     IHNPLDRNHSELRDKKVSLNDGDPFTIALFGVDSDADRKKKGGGERSDSIMILSINPK
                     TKKTEIVSIPRDTRAEIVGRGTTEKIAHAYAYGGPNMAVKSLEKLMNVPIDHYATIDM
                     DGLHNMIDSIGGVDVVSNDTFTVDGVRFTKGQQTHVNGDQALKFIRSRKEEGAGGDFG
                     RQQRQQIVLEAMANKIASPSSITHFNSLMNEIQNNVKTDLTLGDLNTIRSNYKDANDT
                     INKHQLSGQGGIQSDGLYYFIPSEQSKAESTKLLKDNLE"
     gene            complement(6553..7350)
                     /locus_tag="O6Y56_000907"
     CDS             complement(6553..7350)
                     /locus_tag="O6Y56_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HDB5574186.1"
                     /translation="MTDKTLQQIDKLICSWLKQIDNVIPQLIMEMTTETKRHRFDLVT
                     NVDKQIQQQFQQFLATHFPEHQLLAEEKSNEMITNEINHLWIMDPIDGTANLVKQQED
                     YCIILAYFYEGKPMLSYVYDYPHKKLYKAIRGEGAFCNGIKMEEPPSLKLEDAIISFN
                     AQVMNLDTVQELFDASFSYRLVGACGLDSMRVAKGQFGAHINTNPKPWDIAAQFLFAE
                     LLNLKMTTLDGKAIDHLKGAPFIISNKACHETVLKILNANGGYQKYR"
     gene            7735..8427
                     /locus_tag="O6Y56_000908"
     CDS             7735..8427
                     /locus_tag="O6Y56_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HDB5574187.1"
                     /translation="MNKAERQNLIITAIQQNKKMTALELAKYCNVSKRTILRDIDDLE
                     NQGVKIYAHYGKNGGYQIQQAQSKIALNLSETQLSALFLVLNESQSYSTLPYKSEINA
                     IIKQCLSLPQTRLRKLLKRMDFYIKFDDTQHITLPMLFSDILIYCTERNVMLVDHRVD
                     DNIKAENVIFIGLLCKHGHWHAVIYDIAQDKTTELEIENIIDISYSFGKTIQTRDISI
                     DNYHQFLNPIDS"
     gene            complement(8452..9189)
                     /gene="sdpB"
                     /locus_tag="O6Y56_000909"
     CDS             complement(8452..9189)
                     /gene="sdpB"
                     /locus_tag="O6Y56_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease SdpB"
                     /protein_id="HDB5574188.1"
                     /translation="MENEKKKYTFKDIAWRDLLIIPIIGVLIFALNIAAYIGPILFGY
                     YEIDSNLIFVATITQALAYTIGIGAFYLFHLKVMPSRLRAGFAYIKKYWLRLSITYII
                     ALILIYTYEYMTQFLPKHLQYSETANELGLNKMFEVPALLPVAFLLIVIVGPIVEEIV
                     FRHILIGELGKKFNFIAMSIVSVFLFAFIHVTDAKSPFEFGPYLILSIILVFTYLKSG
                     RNLGSTIALHIANNFVSFVISVISIYA"
     gene            9238..9567
                     /locus_tag="O6Y56_000910"
     CDS             9238..9567
                     /locus_tag="O6Y56_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501050.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574189.1"
                     /translation="MINETKYMRQQITNLIQIIDTIKYNTLMTDWNIQTHIYKFNQIV
                     TNELNKFKGFETSYIINENQVSYYEIITLLNKRPLRQVDYGNKIQYLNFYHTELSNAL
                     FTIKFAH"
     gene            10012..10884
                     /locus_tag="O6Y56_000911"
     CDS             10012..10884
                     /locus_tag="O6Y56_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDB5574190.1"
                     /translation="MSNVLTEIDSQYPYMTKNEKKIAKFILNSPQKVIKMRSQDLASL
                     LDISTSSVIRFSKKITDGGFHDLKINISKYVPKASSIYNVELMNNESTESLRTKLHTR
                     TTRALNHANNELNDKTIDQICHCLKRSETIFIYGFGASFVVATDLYQKLSRIGLNIQL
                     VQETHIFATLLATHNSNDSVILITNNGTQSEMQSMVKVIDDYHIPIITITSTRDNPVA
                     QASNIVLTYGKTDENEMHMGATTSLFAQMFTIDILYYRYVALNYHASLDFITQSKMAL
                     DNYRKHLSNINFKH"
     gene            complement(11272..12651)
                     /locus_tag="O6Y56_000912"
     CDS             complement(11272..12651)
                     /locus_tag="O6Y56_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDB5574191.1"
                     /translation="MENNELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVI
                     LAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIHPAAGYMTAWSNIFQWIVVG
                     MSEVIAVGEYMKFWFPELPTWIPGIIAILLLMAANLFSVKAFGEFEFWFALIKVVTII
                     LMIIAGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIG
                     ITAGETKDPQKNIVKAVNGVIWRILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKI
                     GITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIFTKIMRNGVPLYTV
                     VAVSLGILIGALLNVILPLYIDGAKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHP
                     EEVEGHPFKMPGGAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFIR
                     YNKNNVKAK"
     gene            12931..13287
                     /locus_tag="O6Y56_000913"
     CDS             12931..13287
                     /locus_tag="O6Y56_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574192.1"
                     /translation="MLKQILPRATKISVIFAVAFFIINYIGMEKPDILYLVGRTIIAT
                     LAFILICLTVFTIINSPERKIKLGTTLPIALIIGIIFGAIFLTVQIGVITGLIIGVIA
                     TFIWELIEKNKGGRSS"
     gene            13284..13469
                     /locus_tag="O6Y56_000914"
     CDS             13284..13469
                     /locus_tag="O6Y56_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574193.1"
                     /translation="MTTALIGVIVLILLIISFVPNYRAMKSAKEQGSNATRATIMVGI
                     DIILIVLIIVTLLLKYM"
     gene            complement(13565..13756)
                     /locus_tag="O6Y56_000915"
     CDS             complement(13565..13756)
                     /locus_tag="O6Y56_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574194.1"
                     /translation="MMGYIILFFLAGPVILGVGNLVIGPIFNKQTPFRVQVRSFVVGS
                     MIYLILATIGYFLLLQGKL"
     gene            complement(13767..14402)
                     /locus_tag="O6Y56_000916"
     CDS             complement(13767..14402)
                     /locus_tag="O6Y56_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDB5574195.1"
                     /translation="MYRAVIFDFDGTIIDTEQHLFNVINKHLEMHNADPISIDFYRSS
                     IGGAATDLHDHLIKAIGSENKDKLYEEHHLTSTTLPMIDTIKSLMAFLKQRHIPMAIA
                     TSSVKAEIMPTFKALGLDDYIEVVVGREDVEQVKPDPELYLSAVQQLNYMPTQCLAIE
                     DSVNGATAAIAAGLDVIVNTNKMTSAQDFSNVDYVAKDIDYDQIVARFFTK"
     gene            complement(14477..15394)
                     /locus_tag="O6Y56_000917"
     CDS             complement(14477..15394)
                     /locus_tag="O6Y56_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HDB5574196.1"
                     /translation="MFQKLSKFATKSFLVWMLVAAVIGFIFPQHVATLGKWVPYLLGI
                     VMLGMGLTITPNDFKMVFKAPRAVIIGVCLQFSIMPTLAFIIAKSFHLPPDIAVGVIL
                     VGCCPGGTSSNVMSYLAKANVALSVSITTVSTLLAPFVTPALIYLFANEWLEVSFLSM
                     LWSVVQVVLFPIALGIVLQIINRKIAEKASTALPIISVVAISLILAIVVGGSKHQILT
                     TGLLIFLVVILHNVLGYTIGYWLARLLKLDRQDQKAVSIEVGMQSSGLAVSLAALHFN
                     PIAAVPGAVFSFIHNITGPILAKYWSKKL"
     gene            15662..16192
                     /locus_tag="O6Y56_000918"
     CDS             15662..16192
                     /locus_tag="O6Y56_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574197.1"
                     /translation="MLIDKFETYIINIAGLNDRTTRKKLSKLCKSVQFCDALQFSINK
                     QFNQYVLEISLPKQQLPYFISFLSFHQYSIFQVLSPKKINELLDSDNLYQSAKRFDIN
                     IDGLQDAFIKDKVIDIMNMFQNHTDITYTLNKSHAHIICTPEIFAKLLHTIATRNIDI
                     LSANYRSSSMSKARIS"
     gene            complement(16258..17862)
                     /locus_tag="O6Y56_000919"
     CDS             complement(16258..17862)
                     /locus_tag="O6Y56_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDB5574198.1"
                     /translation="MNAIKRFGSAMIVPVLMFAFFGIVLGFATLFKNPTIMGSLADQH
                     TFWFKFWSVIESGGWVIFTHMEVVFVVGLPLSLAKKAPGHAALAALMGYLMFNTFINA
                     ILTQWPHTFGANLEKGVENVPGLKSIAGIATLDTNILGGIIISAIITWIHNRYYSKRL
                     PEMVGVFQGLTFVVTISFFVMLPLAAITCVIWPTVQHGIGSMQHFIIASGYIGVWLYH
                     FLERVLIPTGLHHFIYAPIEVGPVVVNHGLKAEWLQHLNEFAKSTKPLKEQFPYGFML
                     QGNGKVFGCLGIALAMYATTPKENRKKVAALLIPATLTAVVVGITEPLEFTFLFIAPY
                     LFVLHAVLAASMDTLMYAFGVVGNMGGGLLDFISTNWLPLGKEHWGTYVAQVVIGLIF
                     VAIYFFLFRFLILKFDIPLPGRKKTEEEVKLFSKQDYKNKKGDSVDSKRASTGNEYED
                     KAAYYLDGLGGKENIKDVTNCTTRLRLTVYDESKVADTEYFTHQQMAHGLVKSGKSIQ
                     VVVGMTVPQVREAFEQMVEDQSSEDK"
     gene            18192..18956
                     /locus_tag="O6Y56_000920"
     CDS             18192..18956
                     /locus_tag="O6Y56_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDB5574199.1"
                     /translation="MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFT
                     HASNATIHRFTRKLGFDGYSDFKSYLKFESNKTHQLPSNSIDSFKQEIDSTFSYLERV
                     DYQLLTEKMHTASTIYLYGTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKS
                     EPNDLFFIISLSGETHELLEVTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTF
                     YLTNGTDYSSFISYHIFFETLVRKYNEYLLHNDISN"
     gene            complement(19014..19520)
                     /locus_tag="O6Y56_000921"
     CDS             complement(19014..19520)
                     /locus_tag="O6Y56_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HDB5574200.1"
                     /translation="MAKFNVENEHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSA
                     RTNKEIEADVKEGGKYRIVDQQRNGKVNVIEGIYESLVMDEYVKMTIGMPGLSETQDV
                     IEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMYH
                     VIETSTQQ"
     gene            complement(19687..21000)
                     /locus_tag="O6Y56_000922"
     CDS             complement(19687..21000)
                     /locus_tag="O6Y56_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020444780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HDB5574201.1"
                     /translation="MEVHKKSNAWALFPLLLFVALFLGVGIITGDFTSMPLNVAITIT
                     VIVALLMNRKESFAKKVEVFTKGAGHSNIILMMLIFILAGAFSNTAEKMGGVKSTVNL
                     GISLIPENLIIVGLFVICMFVSISMGTSVGTVAAIAPVGYGFAQATDVPTALAMATVV
                     GGAMFGDNLSMISDTTIAAVRTQHTKMKDKFRVNFKIVLPGAILTIIILYFLTNGISL
                     NHAKNYDYNLIKVVPYILVLVLALLGVNVIIVLIGGTLLAGIIGLIDGSFGWMGLLDA
                     VSKGIISMEDIAMIALLIGGLVGIIQHNGGIEWLLQFVRSKVKSKRGAELGIASLVSV
                     ADIATANNTISIIMSGPLAKNIADEYDVDSRKSASILDIFGGCFQGLLPYSPQVISAA
                     GVAGISPLMLFPYSIYPILLGVCGLIAILFNFPKLKKNTSQEMKH"
     regulatory      complement(21077..21172)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            complement(21225..21794)
                     /locus_tag="O6Y56_000923"
     CDS             complement(21225..21794)
                     /locus_tag="O6Y56_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574202.1"
                     /translation="MALIVSRAILILILALAFGIVTVFPEQKLPLYILFTLFVVVAIV
                     SNVWLTHQNVKKNIIKFNKYVAYFLAFVSGLLYIGFVIYTLTIGTYDVLPIIIFAISI
                     VLVQILENILGISIRNTRPSNKQLKVISEQSAQQFKVISLILVSVSIVFIFIALMLKW
                     WLLLVISIIVLIIITVAMIVYEKYYTTPD"
     gene            complement(22281..23162)
                     /locus_tag="O6Y56_000924"
     CDS             complement(22281..23162)
                     /locus_tag="O6Y56_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDB5574203.1"
                     /translation="MAAQDPRTKFKTTDYEKQEQEVPGLQSEMTPAPDCGEASYQGHQ
                     RLQGYKMLVTGGDSAIGRAAAIAYAKEGADVAINYLPSEEQDAQEVRQVIEESGQKAV
                     LIPGDIRDEQFNYDLVEQAYQQLGGLDNVTLVAGHQQYHDDIHGFTTEAFTETFETNV
                     YPLFWTVQKALEYLKPGASITTTSSVQGYNPSPILHDYAASKAAIISLTKSFSEELGP
                     KGIRVNCVAPGPFWSPLQISGGQPQSKIPTFGQKTPLGRAGQPVELCGTYVLLASEES
                     SYTTGQVFGVSGGVQID"
     gene            complement(23273..24394)
                     /locus_tag="O6Y56_000925"
     CDS             complement(23273..24394)
                     /locus_tag="O6Y56_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 peptidase aminoacylase family protein"
                     /protein_id="HDB5574204.1"
                     /translation="MGLKDQAVAWRRYFHQFPELSDKEFKTTQKIKDILTEYHIRILD
                     LPLATGLVAEVGQGPSCIAVRADIDALPIQELVEQDFKSENEGVMHACGHDIHMASIL
                     ATAVKLKEIEGTLTGRVKFIFQPAEELGHGAFKIIETHALKDVQAVLGFHNDPSRPVG
                     TFAIKTGAITSAVDRFEFHIKGVGGHAAKPEQCNDPVIVLAQLINSIQSIVSRNLSAF
                     DEAVVTIGQISCGNTWNVIADHAYVQGTVRSFDPVVRKLIERRLQDVADGLAQAYNMK
                     INLNYTHLPGAVMNDEVLTHKAIAVAQHVGYKVEMMEKPLTIGEDFSGYSQHFPSVFA
                     LIGSHSEYDLHHPQYKPDERILEKVPEYFVEFVKRLLHE"
     gene            complement(24673..25911)
                     /locus_tag="O6Y56_000926"
     CDS             complement(24673..25911)
                     /locus_tag="O6Y56_000926"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HDB5574205.1"
                     /translation="MNDLIINHIAELILPRSTDKPLKGKELDELNVVKNGTVVIKDGK
                     IVYAGQHTDDYDATETIDASGKVVSPALVDAHTHLTFGGSREHEMSLKRQGKSYLEIL
                     EMGGGILSTVNATRETSEDDLFKKAEHDLLTMIKHGVLAVESKSGYGLDRENELKQLK
                     VSNRLAEKYDLDMKHTFLGPHAVPKEASSNEAFLEEMIALLPEVKQYADFADIFCETG
                     VFTIEQSQHYMQKAKEANFKVKIHADEIDPLGGLELAIDEQAISADHLVASSDKGKEK
                     LRNSDTVAVLLPATTFYLGKEDYADARGMLDNNGAIALATDYNPGSSVTNNLQLVMAI
                     AALKLKLSPNEVWNAVTVNAAKAIDINAGTINTGDKANLVIWDAPNHEYIPYHFGINH
                     AEKVIKDGKVIVDNTLSFKA"
     gene            complement(25911..27572)
                     /gene="hutU"
                     /locus_tag="O6Y56_000927"
     CDS             complement(25911..27572)
                     /gene="hutU"
                     /locus_tag="O6Y56_000927"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HDB5574206.1"
                     /translation="MRKIQAKKGLSIECKGWEQEAVLRMLYNNLDPEVAERPEDLVVY
                     GGIGKAARNWEAFEAIEKTLRELESDETMLVQSGKPVAVFKTHEEAPRVLISNSVLVP
                     EWANWDHFNELDKKGLIMYGQMTAGSWIYIGSQGIVQGTYETFAELGNQHFNGDLAGT
                     VTLTAGLGGMGGAQPLAITMNHGVAICVDVDETRVDKRIDTKYCDVKTADLDEALKLA
                     EEAKKRGEGLSIGLVGNAVDIHQAILEKGFKIDIITDQTSAHDPLNGYVPQGYSVEEA
                     KVLREKDPKKYVELSQASMAKHVELMLEFQKRGAVAFDYGNNIRQVAFNNGVKNAFDF
                     PGFVPAYIRPLFCEGKGPFRFAALSGDPKDIERADEEMRKLFPENEKLLRWLDLAEEK
                     ISYQGLPSRIAWLGYGERAKMGLALNRLVRDGEISAPIVIGRDHLDAGSVASPNRETE
                     SMKDGSDAVGDWAVLNALINTAAGGSWISFHHGGGVGMGYSLHAGMVVVADGSERAER
                     RLERVLTTDPGMGVARHVDAGYDIAIQTAKEKGIHIPMIDKAGDK"
     gene            27732..28616
                     /locus_tag="O6Y56_000928"
     CDS             27732..28616
                     /locus_tag="O6Y56_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDB5574207.1"
                     /translation="MKIIQLEYFLAIVKYNSFTKAAQFLHISQPSLTATIKKMEADLG
                     YDLFTRSTKDIKITEKGIQFYRYASELVQQYRSTMEKMYDLSVTSEPRIKIGTLESTN
                     QWIANLIRKHHSDYPEQQYRLYEIHDKHQSIEQLLNFNIHLAITNEKITHEDIRSIPL
                     YEESYILLAPKETFKNQNWVDVENLPLILPNKNSQVRKHLDDYFNRRNIRPNVVVETD
                     RFESAVGFVHLGLGYAIIPRFYYQSFHTSNLEYKKIRPNLGRKIYINYHKKRKHSEQV
                     HTFVQQCQDYLYGLLEAL"
BASE COUNT         9470 a         5583 c         3894 g         9676 t
ORIGIN      
        1 tttctgtccc actcccgcgt tttttgttag gttaaaatcc atttaactaa cacactcaga
       61 atgcgctaaa ggagctcgaa acaataaatt gttccagccc ctttatgcac cgatgtctta
      121 tttataatat gtttgtctaa tatcatcttt ctttatacca aactgcttat aggatttatc
      181 cattaatttg gcaattttat ctgcccagcg aatgtcactc gcatattgat gttgcgcagg
      241 attttctgga ttccatcgca tttgatataa attcagttgg ttgttttcaa aatattcatt
      301 acgaatgaac tttgcaccac caagaatcgc cttatctggt gatgtccatt gttccttttc
      361 agcataactt ttcccactac gaacagcact actatcgaat gctcctatac caaaaaagtt
      421 gtaatagcgt ttttttccat ctttaatgcc ttttgctaat tctgatttgc cgttacctgt
      481 ttctactaat gcatggctaa caagataaat gacattaacc tcatattttt cttgagcttc
      541 tagaaaaact ttccctcgat tttctaaaat ccccttacct tttagcaatt ggttaacttc
      601 agattccgac atcggcactt tttctgtgat atccatatac ttcatatcat tgtctttatg
      661 tgaaatagtc attgctttag caatttcatt attatttgct tcaacaaatt taccatcctc
      721 ttcttttgtc tgtacaatac ctttcccttg ttgcattgaa acagcctcat caaaagagta
      781 attcacatca tttttaaaca atttagtttc attcacgatg agtaatacag caaaaacaac
      841 taaaataact atcaatagta gcgttgaaat gcgtaacttg aaattcttct tcatatagac
      901 aaaacctcat ttttcttact tagacaataa aaaatatgcc actacaatcg ctaatattac
      961 gattaaaaaa gaagcgttaa cgattacttt catcgttgtt ctatctctga acatcatatt
     1021 aaagacaact agactaattg ataatgaaac agcaaaaaaa gtaatagcta acactaattt
     1081 catcataaat aaacagacta aacctatgac taataatgta ttagaaatta cagctgacgt
     1141 ttttaacatt ctcgaattaa tatgcactca ccctttttat ttaaataact tacataatca
     1201 taataataca tgatgtttca tagccctgtc gatggttgat tatcaatagc acaatatttt
     1261 ctcgactctc aaaaatattg tttaaagttt gatgaagact cggatacaaa aaatatttca
     1321 atataactta aaacagtgct cctacactga catgcaggaa cactgttata ttcaaagaca
     1381 aaaaaatcgg aaagatgaaa agtaaaaaac ttttgcatca atccgattta ttatagaccc
     1441 atattaatct tctcgagaca taccttttag catattaagc atatatgtta aactacggtt
     1501 catgtcgtca tcttttaaaa cgcctaacag acttcttaca gatgtcttcg cattaggact
     1561 cgcttgattt gcaacatgta atcctttatt aactttattt aggaagtcac ttaaatctga
     1621 tacatttaat tcacctaata aaaataccat tgaagccata tttgtgagca aaccagtata
     1681 gatatctttg ttgagctcaa cagcaaattt attaataatc acttgacgtc ctctaactgc
     1741 gccatttaaa gcatctaata ttttagcatc atctaacact ttaataagtt tgattgcttt
     1801 taatatacta tctttgtttg cagcaattgc ctctgtaact tcatttaaac tttctaactt
     1861 aatttgttct tctgattttt ctaagcgtct aattttagaa gatattctct cagccattat
     1921 ttatccacct gatttcccgg gaaaacataa tctggacgtt cccatttttt ctgtacttga
     1981 acactgtact gcggatgacg ttttttattg acacggaaat tattagggtt caacggtgac
     2041 ttaccacgtt tcgtaattac ctccaaacga cagcttgtac gtttataaga tggtgtatcc
     2101 gtgtattgat caacatcact attagttaat aagttaattg cgcctagatc tccattttcc
     2161 atcgcatcat tatttaatgg aatatagatt tctttacctt taacacgatc tgtcacgtga
     2221 acttgtaata ccgcttctcc tgtttcagat atcaacttaa cttctgcacc ttcatgaatg
     2281 cctctatctt cagcaagttc tggagaaatt tcaacaaatg cacgtggcac tttgtattta
     2341 atcattggtg tttgataagt catattacct tcatggaagt gctctaacaa tcgaccattg
     2401 tttacatgaa tatcataaac ttcatcttgc ttaaagtaat tatcaaatga taatgggaat
     2461 aattttgctt taccattatc gaaattaaat ccttctaaat aaagtattgg ttcatctgta
     2521 ccatctggat gcacaggcca ttgtaaacta ttaaatcctt ctaaacgttc gtagcttacg
     2581 ccagcatata atggtgttag tctagcaatt tcatccataa tttcgcttgg atgtttgtaa
     2641 ttccaatcga aacctaattt attagcaatt gcttggaata ttttccagtc aggtttagaa
     2701 tcacctaatg gtttcaatgc ttggtataaa cgttgaatac gtcgctcagt attcgtaaaa
     2761 gtaccatctt tttctaatga aggacttgct ggtaagacaa catctgcaaa tgtagctgta
     2821 aatgttaaaa attcatcttg gactaccatg aaatctaatt tttcaaaagc agcttgtaca
     2881 aaattaatat ttgaatcaac aataccagta tcttctccat atagatataa tgaatgaatt
     2941 tccccatcat ggacaccttc aaccatttca tgattatctt taccaacttt aggattcaat
     3001 ttaacgccat attctttttc gaatttagcg cgaatatcgt ccgcttcaat actttgatag
     3061 ccagtaattt tatcaggcat actacccata tcactacaac cttgaacatt attatgtcca
     3121 cgtaatggat acgcacctgt accaggtcga cgataatttc cagtaactaa taataagttt
     3181 gaaattgctg tacttgaatc acttccaatg tcttgttgtg tgatacccat tgcccaacaa
     3241 atgacaacgg actcagcttt ggcacattct tcagcgaact taatcaactc tgcttctgga
     3301 ataccagtag cctcttcagc gaatgccatt gtaaatattt ctaatgactt gtaatattca
     3361 tcaaaatctt caacccactc ttcgataaag gctttatcgt gtaagtcatg atcaatgata
     3421 tatttcgtca ctgcgcttaa ccaagccaaa tctgtacctg gtttcggttg ataaaaacga
     3481 tctgcgcgtt cagccatttc atgttttcta atatcaaaca catgtatttt ttgaccaaat
     3541 aatttttgag cacgcttcat gcgtgatgca ataaccggat gcgcttcggc tgtattcgta
     3601 ccaatcaata cagacattgc tgctttttct aaatcttcaa tactacctga gtcaccgccg
     3661 tgtccaaccg ttctaaataa gccttttgtt gcaggcgctt ggcaatatct tgaacagtta
     3721 tcaacgttat tagtgccaat aacttgtctt gctaattttt gcattaaata cgattcttca
     3781 tttgtcgctt tagaagaaga aatgaatgat agtgcatctg ggccatactt ttctttaata
     3841 gatgtaaaat tatctgcaat gacatttaaa gcttcatccc attctacttc atggaactca
     3901 ccatttttcc ttactaatgg tttcgttaag cgttgatctg aattaatatg tgcccatgaa
     3961 aatttacctt taacacaagt tgcaatttta tttgctggag aatcatgtga tggttgtact
     4021 tttaaaattt ctctatcttt agtccaaact tcaaatgaac agcccacacc acaatatgta
     4081 catactgttt tagttttctt aatacgctct ttacgcattt ctgcttctga atctgagatt
     4141 gcaaatagtg gaccataacc aggttctgct tttttagtta aatcaatcat tgccgctaat
     4201 gaaccaggtt ccgtatcagt catataaccc gcattacctt ccatgttaac ttccatcatc
     4261 gcattacacg ggcatacagt tgcgcattga ccacaagata cacatgacga ttcattaatc
     4321 ggtacatcat tatcccaaat gacacgtgga tgctcacgat cccaatcaat tctaattgtt
     4381 tcatttactt caatatcttg acatgcttct acacaacgtc cacataagat acattgattt
     4441 ggatcataac gataaaatgg gccgtaatct ttttcgtatg gcttctcttt atattcatac
     4501 gtttgatgct gaagtcccca tgcatccatc gtattatgaa tttcacaatc accattatta
     4561 taatcacata ctgtacaata cagcatatgc ttttctaaaa ttcgatcaag cgcttctttt
     4621 tgagcatctt tcacgtcatt attcactgta tttactgtca ttggacgatc aatcaccgta
     4681 ctacatgaac gttcaatttt accatcaatc tcaacagtac atgtatcaca cgtttgtatc
     4741 ggtcccattg attcgttata acaaattgaa ggcacaaaag tatcttgcga tttaatgaat
     4801 tcaagtaaat ttgtacctgg ttctacaaga taatctttac catcaagcgt gaccaccaaa
     4861 tgttcttgca tactattcac cccatctata tatttttccg taaatgactt ttaataaatt
     4921 gcctaatttc cacctaaaat aaagatgccc cacacatctt tcagatagaa tcaatataat
     4981 tgtattactt taagtgtata atgttaagcg tatttttgta ttttttattt ttgcaatcat
     5041 ttttatttga aatattttgc gcgaaattaa atcatctttt tgtttaattg aaaataatta
     5101 tcattattag ttttccaatt atctgtttca cgctttttgc catatctttc acaaccttat
     5161 taatgacaat acttaataat cacctcacct aaaaatcgct ataccattta taaataccct
     5221 ttttctgaaa attaataacc caagtttgat aaatatctac tgtcatttag aaggtaagat
     5281 ttatctttaa attaaatttg taatggatta atttataaaa atcaaatcag gcattaaata
     5341 aaatagccca taaatacaaa gtgttatcac cttctattta ggggctatta attctattcg
     5401 ttattctttt tacagctcat tctatctaat taatttgtgt acaattttga taacttattt
     5461 tcccttattt tactactcta gattatcttt taataactta gtactttcag cttttgactg
     5521 ttcactagga atgaagtagt acaatccgtc actttgaatg ccaccttgac cactcaattg
     5581 atgtttatta atcgtgtcat tagcatcttt ataattgctt ctaatcgtat tcaaatcacc
     5641 taatgttaaa tctgttttaa cattattttg aatttcattc attagactat taaaatgtgt
     5701 aatcgatgat gggcttgcaa tcttattagc catcgcttca agtacaattt gctgacgttg
     5761 ttgtcgacca aagtcaccac cagcaccttc ttctttacga cttctaataa acttcaatgc
     5821 ttgatcacca tttacatgtg tttgctgtcc ttttgtaaaa cgaacaccat caacagtgaa
     5881 tgtatcatta cttactacat caacaccgcc gatgctatct atcatattat gcaaaccatc
     5941 catatcaatt gtcgcataat gatcaattgg cacattcatt aatttttcaa gtgatttaac
     6001 agccatattt ggtccaccat atgcataggc atgtgcaatt ttttcagtag taccacggcc
     6061 aacaatttcc gctcttgtat cacgcggtat acttactatt tcagttttct tcgttttagg
     6121 gttgatagat aaaatcataa tactatcact acgctctccg ccaccctttt tcttacgatc
     6181 agcatctgaa tcgacaccaa acaaagcgat tgtgaatgga tcaccatcgt ttaaactcac
     6241 ttttttatct cttaattctg aatgattgcg atctaacgga ttgtgtatct tattaccagt
     6301 aataaaaatt ttagcagcta catacacaac agctacaaat gctaagatta ctaaaatacc
     6361 gaatacccat aaaaatattt ttttcggtag gctcatttta cttttagacg aacgtttcaa
     6421 tcccaccact cctttactat tccttacata ctttgtctgt tttctctatt tattatatag
     6481 taaaataatt tttttactat acttctgtag acgtataact attttttatc attttttatc
     6541 actagagaat atctatctgt atttttgata accaccattt gcatttaaaa ttttaagtac
     6601 cgtttcatga catgctttat tacttataat aaaaggtgca ccctttaaat gatcaattgc
     6661 cttaccatct aaagtcgtca tttttagatt caatagttct gcaaataaaa actgtgcagc
     6721 aatgtcccaa ggtttaggat ttgtattaat atgtgcccca aactgacctt ttgccactcg
     6781 catagaatct aatccgcaag caccaactaa acgataacta aatgaggcgt caaataactc
     6841 ttgcaccgta tccagattca ttacttgtgc attaaacgat ataatagcgt cttccaattt
     6901 taacgatggt ggttcttcca tcttaattcc attacaaaaa gcaccttctc ctcgtattgc
     6961 tttataaagc tttttatgcg gataatcata tacgtacgat aacattggtt taccttcata
     7021 aaaatacgcc aatataatac aataatcttc ttgctgtttt actaaattgg cagttccatc
     7081 aatgggatcc ataatccata aatgattaat ttcattcgta atcatttcat tacttttttc
     7141 ttccgctaat agttggtgtt ccggaaaatg tgttgctaaa aattgttgaa attgttgttg
     7201 aatctgttta tctacatttg taactaaatc aaatcgatga cgcttcgttt ctgtagtcat
     7261 ctccataatt aattgtggaa taacattgtc tatttgtttc aaccacgaac atattaactt
     7321 atctatttgt tgtaatgttt tatctgtcat ttcgtccacc acttctcata tcattatcat
     7381 tttattatta ccctatatta aaagaatcaa caatacaact gaagacttct tcattttatg
     7441 cataaaaaaa tcggctagtc acgtgctagc cgacaaatag aaaggaaagt aagtaataaa
     7501 tattgaagat gttgtgatgt aacttgaacg attaaaagct atctgttata tagctctacc
     7561 cctttgttta atcgctcccc ctgttacaag taatatcata gcacaatctt ttttaaaatg
     7621 taagcgtttt ccacaaaatt tttccgattt ttttaaaaag atattgaaaa tgtcctcatt
     7681 gtcactctta tgttatactt tgtgtaatat atcatctttt aggaggtggc tgtcatgaat
     7741 aaagctgaaa ggcaaaattt aataattact gcaattcaac aaaataaaaa aatgaccgct
     7801 ttagaattag ctaaatattg caacgtatcc aaacgcacaa ttttaagaga tattgatgat
     7861 ttagaaaatc aaggtgttaa aatttatgcg cattatggga aaaatggtgg ttaccaaata
     7921 caacaagcac aatctaaaat tgcattaaac ttatctgaaa cacaattatc ggccttattt
     7981 ttagtgctta atgaaagtca gtcgtactcg acattaccat ataaaagcga aatcaacgca
     8041 attataaaac aatgtttaag tcttccacaa acacgcttaa gaaaattgct taagcgcatg
     8101 gacttttata ttaaatttga tgacacacaa catataacac tcccaatgtt gttttccgac
     8161 attttaatct attgtacaga acgaaatgtg atgttagtag atcatagggt tgatgataat
     8221 attaaagccg aaaatgttat atttattggc cttttgtgta aacatggaca ttggcatgca
     8281 gtcatttatg acattgctca agacaaaact accgaactcg aaattgaaaa tattatagat
     8341 atttcgtatt cattcggtaa gacgattcaa accagagaca tatccattga taactatcat
     8401 caatttttaa accccatcga ttcctaaact atggagtcga cggggtttta tctatgcata
     8461 aatacttatt actgatataa cgaaagaaac aaaattattt gctatatgta atgcaattgt
     8521 tgaacctagg tttcttccag attttaaata agtgaaaacc aatatgatgg atagtatgag
     8581 atatggacca aactcaaacg gtgactttgc atcagtcaca tgaataaatg caaataagaa
     8641 caccgaaaca atactcatag ctataaaatt aaacttctta cctaattctc caattaaaat
     8701 atgtctaaat acgatttctt caactattgg acctacaatc acaattaata agaatgctac
     8761 aggtaataat gcaggcactt caaacatttt atttagccca agttcattgg ctgtttcact
     8821 atattgcaaa tgtttaggta gaaactgtgt catatattca tatgtataaa ttaagatgag
     8881 agcaataata tacgttattg acaatctaag ccaatatttt ttgatatacg caaaaccagc
     8941 tcgaagcctt gatggcatca cttttaaatg aaataaataa aatgcgccaa tcccaatcgt
     9001 atatgctaaa gcttgtgtga tagtcgctac aaatatcaga ttactatcga tttcataata
     9061 accaaacaaa attggtccta tgtaagctgc aatgtttagt gcaaatatta atacacctat
     9121 aattggaatt ataagcaaat ctctccatgc tatatcttta aacgtgtatt tctttttttc
     9181 attttccact gttatatcct ttcctgttta ataattgatt tttggaggta cttctacatg
     9241 ataaacgaaa ctaagtatat gagacaacaa attactaatt tgattcaaat cattgatacg
     9301 attaaatata atactttaat gacagattgg aacattcaaa cgcatattta taaatttaac
     9361 caaatagtta ctaatgaatt gaataagttc aaaggctttg aaacatcata tataataaac
     9421 gaaaatcaag tttcctatta tgaaattata acactactta ataaacgtcc cctccgacaa
     9481 gtcgactatg gtaacaaaat tcaatatctt aatttttatc atacagaact atctaacgca
     9541 ttatttacaa ttaaatttgc ccattaacct atttttcata aaatgtcatt taaacaagtt
     9601 atttattaaa attcacttta ttacataaat tatacaatta aaaagtttct tcaaattgta
     9661 aagatgcatt aatcgagtta taatcataat gattaagatg gtagatttag tcttatataa
     9721 ctacatttac taagatttaa atagatgagt acataatgta taaattggga atatacagta
     9781 tgacttacgg taatatatca atatattgat atattatttg cacatgggag tatgctattt
     9841 tttatctata catcttaaaa aaatttacag ttttataatt caatatcatt aaacaaacaa
     9901 catattcagc ttatttttca ttctcttacg ttacaagttg taaataccat cgcgttaaac
     9961 aacaatagcc aacgctaata aaatatattg cgttaaagtg gagtgattaa tatgtcaaac
    10021 gtactaacag aaatagatag tcaatatcca tatatgacta aaaatgaaaa aaagatagct
    10081 aaatttattc tgaattcacc tcaaaaggtg attaaaatga ggtctcaaga cttagcaagc
    10141 ttattagata ttagtacatc atcagtcatt cgattcagca aaaaaattac tgatggcggt
    10201 tttcacgact tgaaaataaa tatatctaaa tatgttccta aagcatcatc aatttacaat
    10261 gttgaattaa tgaataacga aagcacagaa tctttaagaa ctaaactcca tacacgtact
    10321 acacgcgcac ttaatcatgc taataacgaa ttaaatgata aaactattga tcaaatatgt
    10381 cattgtttaa aacgttctga gacgattttt atatatggtt ttggcgcatc ttttgtagtt
    10441 gctaccgact tataccaaaa gttatcaaga ataggtctta atattcaact tgttcaagaa
    10501 acacatattt ttgcaacatt attagcaact cacaattcga acgacagtgt tattcttatt
    10561 actaacaatg gtacgcaaag tgaaatgcaa tcaatggtta aagttattga tgactaccat
    10621 atacctataa ttacaattac tagtacaagg gataatcccg tagcacaggc atcaaatatt
    10681 gttttaactt atgggaaaac tgatgaaaat gagatgcata tgggagcaac aacttcatta
    10741 tttgctcaaa tgttcactat tgatatttta tattatcgtt atgttgcatt aaattatcac
    10801 gcatcattag atttcataac acaatctaaa atggctttag ataactatcg taaacattta
    10861 tcaaatatta actttaaaca ttaacagtct tatataaatt ttttaatcat gtcatataat
    10921 aatttatgca tcattttcaa agcttacatg tcttttatct tgtataacat acgcatatga
    10981 ccaatgattt gataaggcca ttctatttct tatattaaaa acaaacgcag ttgattaacg
    11041 gattcattcc atatatcaat tgcgtttgtt atttttataa tgctattttt tattttaaag
    11101 cccacagtaa aaactatcga tagtataccc ttttaaaggt aaattcttac tacaacttcg
    11161 atttaagcta tatttataaa aaatgcgcct actcataaca tttctttggc tatttaactt
    11221 taataagcta gggccaagtt tgtcataaaa taagcgcaca ttataatcat actattttgc
    11281 ttttacatta tttttattat atctaataaa gtaataaatc gttacaatcg ttaagaagat
    11341 gacaccaata agcactgata ttctagtttc aacattaaat accataccaa ccaatactaa
    11401 tattaagaat aagattgtta aatagttagt tactgcgcca ccaggcattt tgaatgggtg
    11461 accttccact tcttcagggt gtaattttct aaaacgtaag tgactgaata aaatcataaa
    11521 ccaaggaatc atacctggta aaatagacgc actataaacg tatacgaaaa tactcttcgc
    11581 tccatcgata tataaaggta aaattacatt taataaagca ccaattaaaa taccaagaga
    11641 tactgcaaca acagtgtaca atggcacacc atttctcatg attttagtaa atattttcgg
    11701 catttcacct ttatgagcaa gtgtataaat catacgactc gcactgaaaa tacctgagtt
    11761 acatcctgac attgctgcag ttaatacaac aaagttaatt aatccagctg caaatgtaat
    11821 accgatttta gcaaatgttg caacaaacgg acttccaatg tctcctaatt gattccaagg
    11881 atacactgaa acaataacaa aaatagcacc taaatagaaa attaaaattc tccagataac
    11941 accattcact gctttaacga tatttttctg aggatcttta gtttcacctg cagtaatacc
    12001 tatcagttcc acaccttggt atgaaccaat tacaattgat aatgcaaaga agaaaccaac
    12061 aataccattt ggcataaatc cgccatttgt ccatagatta gaaataccta ccgcatggcc
    12121 accatttcca aaaccaaaga aaataagacc aaaaccagca ataatcatta aaataattgt
    12181 tacaacttta attaaagcaa accaaaattc aaattctcca aacgctttta ccgagaataa
    12241 attcgctgcc attaataata aaatagcaat aataccagga atccaagttg gcaattccgg
    12301 gaaccaaaac ttcatatatt ctcctactgc tatgacctca ctcataccaa caacaatcca
    12361 ttggaatata ttactccatg ctgtcatata acctgctgca ggatgtatat aatcacttgc
    12421 aaatgttgca aatgatcctg ttgtagggtt taaataaatc atttccccca ttgctctcat
    12481 gattaaaaat aaaaagatac ccgcaattaa atatgcaagg ataactgatg ggcccgtcca
    12541 tttaattgta cttgtcgcac ccatgaaaag ccccacgcca atcgtaccac caagtgcaat
    12601 catttgaatt tgacgggcac tcaatcccct ttgtagttca ttgttctcca taacttctta
    12661 ccccatctct gattgatact aaataaatcc ataaaaaaac ttattgccgt aattatacta
    12721 taaattatcg attttggtac attaatattt gcataccatg caatcgttta cagaactact
    12781 atagcaggct tttgcaactt tgcaaacaat tattttgtga tttttctaaa aaattaaaaa
    12841 agtcgtccgc gaaacattga gtcacataca acttcagcta ttacaagtaa ttatgatata
    12901 attttaataa tattaaaaag gagtatatca atgttaaaac aaatactgcc acgtgctaca
    12961 aaaatatcgg taatctttgc tgtagcattt ttcatcataa attatatcgg tatggaaaaa
    13021 cctgacatcc tatatttagt tggaagaact attattgcaa cacttgcttt catactcatt
    13081 tgtcttacag tatttactat tattaattct ccagagcgca agattaaact cggtacgact
    13141 ttaccgattg cattaattat tggtatcatt ttcggcgcca tatttttaac ggtacaaatc
    13201 ggtgtcatca ctgggttaat catcggtgtg attgctacgt ttatttggga attgattgaa
    13261 aaaaataaag gaggtcgttc atcatgacaa cagcattaat tggtgtaatt gtattaatct
    13321 tactaattat tagctttgtg ccaaactacc gtgctatgaa atcagcaaaa gaacaaggaa
    13381 gtaatgcaac aagagctaca attatggtag gcatagatat tatcttaatt gtacttatca
    13441 tcgtgacgtt attattaaaa tatatgtaac tatttaaacc accctatctc atacataaac
    13501 atgaacgttc taccatttca catacatatg gtcgtccatt taatgaggta aggtggtttt
    13561 ctcgttaaag tttaccttgt aatagtaaaa aatagccaat tgttgcgagt attaagtaaa
    13621 tcattgaacc aacaacaaaa gatcttactt gcacgcgaaa tggtgtctgt ttgttaaata
    13681 taggaccaat caccaaattt ccaacgccta aaattactgg accagctaga aaaaacaata
    13741 taatgtaacc catcatgata cgcctcctat ttcgtaaaga aacgcgctac aatttgatcg
    13801 taatcaatat cttttgctac ataatctaca ttagaaaagt cctgtgcgct tgtcatttta
    13861 ttcgtattaa caataacatc taatccagct gcaatcgcgg ctgtagcacc atttacagaa
    13921 tcttcaatag ccaaacattg tgtcggcata taatttaatt gttgtactgc agataaatat
    13981 aattcagggt caggtttaac ttgttcaaca tcttctctac caacaactac ctctatataa
    14041 tcgtctagac ctaatgcttt aaaggtaggc attatttccg ctttcacact acttgtggca
    14101 atcgccatag gaatgtgacg ttgctttaaa aatgccatca atgatttaat cgtatcaatc
    14161 atcggtaatg ttgtactagt aagatgatgt tcttcataaa gtttatcttt attttccgaa
    14221 ccaatcgctt taattaaatg gtcatgcaaa tctgtagctg ctcctccaat agaagaacga
    14281 taaaaatcaa tgcttatagg atcggcatta tgcatctcta aatgtttatt aataacatta
    14341 aataaatgtt gttccgtatc tattattgtt ccatcgaaat caaatataac tgctctatac
    14401 atatatttac tcctctattt tttctcttta tcaaagctta acacagtccg atgaccactt
    14461 cattctatta gtgcaattat aacttttttg accaatactt tgctaaaata ggccctgtta
    14521 tattatgaat gaaactaaac actgcgcctg gtactgctgc aattggatta aaatgcaatg
    14581 ctgctaatga cacagctaaa ccagagctct gcattccaac ttcaatactg actgcttttt
    14641 gatcttgtcg atctaatttt aaaagacgag ctaaccaata tccaatcgta taccctaata
    14701 cgttatgtaa aataactact aaaaatatta ataatcctgt agttaagatt tggtgcttac
    14761 tgccacctac aactattgct aaaattaatg aaatagcaac aactgatata atcggcaaag
    14821 ctgtagaagc tttttcagca attttacgat taataatttg caaaacaata cctaaagcaa
    14881 ttggaaataa tacaacttga acaactgacc acaacatact caagaaagat acttccaacc
    14941 attcatttgc aaatagatat attaacgcag gtgtaacgaa tggcgctagc aacgtagaga
    15001 ccgtcgtaat agaaacagaa agtgctacgt tagctttggc taaataactc attacattac
    15061 ttgatgtccc acccggacaa catccaacta atattacgcc aacagcaata tcaggtggta
    15121 aatgaaaaga ctttgcaatt ataaatgcta atgtgggcat aatactgaat tgtagacaga
    15181 caccaataat tactgctcta ggtgctttaa agaccatttt gaaatcatta ggtgtaattg
    15241 ttaatcccat acctaacata acaataccaa gtaaataagg tacccactta cctaatgttg
    15301 caacatgttg tgggaaaata aatccaataa cagctgctac taacatccat accaaaaaac
    15361 tcttcgtggc aaatttactc aatttttgaa acattgttaa cacatcctcg tcgataatat
    15421 tgaaaaatat taccataaga ccagtaaggt tacaattact tttctgaaaa ttaagattat
    15481 tcagccattc tcttcttatt gcaaatattt tatcactgat aaacaattat tttaaacttc
    15541 attcaaaagt cttagtgaat aaagaaaaaa agcgtggtaa aatcaacttg aacaaaatta
    15601 agtcaccttt ataaatatta aacgtgtatt taatgccatg tattcctcgg gaggtcctca
    15661 catgttaatt gataaattcg aaacatacat catcaacatc gccggtttaa atgaccgtac
    15721 tactagaaaa aaattaagta agttatgcaa aagtgtacaa ttttgtgatg cgttgcaatt
    15781 ctcaataaac aaacagttta atcagtatgt attagaaatt agcttaccaa agcaacaact
    15841 tccatacttc atttcatttt taagttttca tcagtatagt attttccaag tactttcacc
    15901 aaagaaaata aatgaattac ttgattctga taatttatat caatctgcaa agcgtttcga
    15961 tatcaatatt gatggcttgc aagatgcttt cattaaagac aaagtcatcg atattatgaa
    16021 tatgttccaa aatcacactg atatcactta tacgttgaat aagtctcatg cgcatattat
    16081 atgtacgcca gaaatattcg ctaaattgtt acatacgatt gcaactagaa atatagacat
    16141 tctatctgcc aattatagat cgtcatctat gagcaaagct cgtatatcat aataaaagac
    16201 acatctatac gatgatcatt tacaatgatt gcgtatagtg atgtgtcttt ttttgtatta
    16261 tttatcttcg gacgattgat cctcaaccat ttgttcaaat gcttcacgaa cttgtggtac
    16321 tgtcatacct actacaactt ggatactctt accactcttt actaatccgt gtgccatttg
    16381 ttgatgcgtg aaatattccg tatccgcaac tttactttca tcataaacag ttaagcgtaa
    16441 tcttgttgta cagttagtaa catctttgat attttctttg ccgcctaaac cgtctaggta
    16501 atacgcagct ttgtcttcgt attcattacc agttgaagca cgtttagaat ctacgctatc
    16561 acctttttta tttttatagt cttgtttaga gaataactta acctcttctt ctgttttctt
    16621 acgtccaggt aatggaatat caaatttcaa aattaaaaat ctgaataaga agaagtaaat
    16681 cgctacaaat attaagccta taacaacttg tgccacataa gtgccccaat gttctttccc
    16741 aagtggtaac cagtttgttg aaataaagtc taacaaacca ccacccatat ttcctacaac
    16801 accaaatgcg tacattaaag tatccattga tgctgctaaa actgcatgta atacaaataa
    16861 gtatggcgcg atgaataaga atgtaaattc taatggctca gtaataccta caacgactgc
    16921 tgttaatgtt gcaggaataa gtaatgctgc tactttttta cgattttctt taggtgtcgt
    16981 agcatacatt gctaaggcaa tacctaaaca tccaaatact ttcccatttc cttgtaacat
    17041 aaagccataa gggaattgct cttttaatgg cttagtactc ttagcaaact catttaaatg
    17101 ttgtaaccat tcagctttca agccgtgatt gactactact ggtccaactt caattggtgc
    17161 ataaataaag tgatgtaatc ctgtcggtat taatacacgt tctaagaagt gatacaacca
    17221 tacaccgata tagcctgaag caatgataaa gtgttgcatt gagccaatac cgtgctgaac
    17281 agttggccaa ataacacaag taattgctgc taatggtaac atcacaaaaa atgagattgt
    17341 aaccacaaat gttaaacctt ggaatacacc aaccatttct ggtaatcgtt tactatagta
    17401 tctgttgtga atccaagtaa taatagctga aataataata ccacctagaa tattcgtatc
    17461 caatgtggca atacctgcaa ttgattttaa accaggtaca ttttcaacgc ctttttctaa
    17521 attagcgcca aacgtatgtg gccattgcgt taaaatggca tttataaatg tattaaacat
    17581 taagtaaccc atcaatgctg caagtgctgc atgacctggt gcttttttag ctaaagaaag
    17641 tggtaaacct acaacaaata caacttccat atgcgtaaaa ataacccagc caccagattc
    17701 tatcactgac caaaatttaa accaaaacgt atgttgatct gctaaactcc ccatgattgt
    17761 aggattttta aataatgtcg caaagccaag cactatccca aagaaagcga acattaatac
    17821 tggtacaatc attgcactac cgaaacgctt tatcgcattc atcttctatt ccctccatat
    17881 catctttcct aacaatacat ctaattagat tcatttataa atagatgtct tactatttaa
    17941 atataatata tagtaaacgc ttacacacct acaacgacat tgacgtattt tgaaagtatt
    18001 ttgtataatc agattatctt ttcatatagt gaaaattttt tcacgacctt atgtatgaca
    18061 tcgttgaatt ggtaatacat tcgttttaaa cgcataatca aacctatatc aatacacaaa
    18121 tatatataat gacatacaag gttttaatgt aataacgatc tatcacacat ttatttttaa
    18181 ggaggttgaa tatgttttta gatgaacaca ttaatcgaaa ctttgataaa cttaatgaca
    18241 atgatttaca tatcgctcac tttatcaata cacatataga tgaatgtaaa aatatgaaaa
    18301 tacaagattt agcgcaattc acacatgcct cgaatgcaac cattcacaga tttacacgca
    18361 aattaggttt tgacggttat agtgatttta aatcgtacct taaatttgaa agtaataaga
    18421 cacaccaatt accatctaac tctatcgata gtttcaaaca agaaatcgat agtacattca
    18481 gttatttaga acgcgttgat taccagcttc ttactgaaaa aatgcataca gcttcaacaa
    18541 tatatttgta tggtacaggg cgtgcacagt taaacgttgc ttcagaggca cagcgtatat
    18601 tgttaacgtt acataatcat gtcattgtac ttcatgatga acatgaactt aaaatgattt
    18661 tgaacaagag tgaacctaat gatttattct ttattatttc attatcaggt gaaacacatg
    18721 aattattaga agtaacaaac ttgcttcaac ttagacaaaa atactttatt tctgttacta
    18781 caatgaaaga taataccctt gctcaaaaag caaattacaa cgtctatgta tccagtaaca
    18841 cattctactt aactaatggt acagactatt ctagcttcat cagttatcat atattctttg
    18901 aaacacttgt aagaaaatat aatgagtatt tactacataa tgatatttca aattagaaaa
    18961 aaggaagtta tgatttaatg gccttgagcc tatcataact tccttttatc attttattgt
    19021 tgtgttgatg tttcgataac gtggtacatc ttatcaaaca tcaattcgaa accatgcacc
    19081 atggcatcat gatattcttt tttcttttgc ttgtattcta aattagtaaa tcgtctttct
    19141 ttttcaacta atgaacgata ataaaatagc atttgggtgc cacctgtttc acgttcaaaa
    19201 aattctacct caatgacatc ttgtgtttca cttagtccag gcataccgat agtcatctta
    19261 acgtattcat ccataactaa agattcataa ataccttcaa tcacatttac tttgccatta
    19321 cgttgttgat ctacaatacg atatttaccg ccttctttaa catccgcttc aatctcttta
    19381 ttcgttctgg ctgatgtcat aaaccattgt ttcaacaaat ctttctttgt ccaagcttcg
    19441 tatactaact ctggagaaaa tttataaagc ttttcaattt caacttcgac atgttcattc
    19501 tctacattaa attttgccac tgttgtccac ccactttcgc tcttactttt attttaacgt
    19561 atttttgctc agttccaaac atagatgatc atcattttta aaagattagc gttatacggt
    19621 gagtacaaca tgatctgtta atataacaag ccaccttact tggctacatc gatatattgt
    19681 taagcattaa tgtttcattt cttgactagt gttctttttt agctttggaa aattaaataa
    19741 aatcgcaata agtccgcata cacctaataa tataggataa atgctgtatg ggaataacat
    19801 taacggtgaa ataccagcta caccagccgc tgaaatgact tgcgggctat atggtaataa
    19861 accttggaag cagcctccaa atatatcaag aatacttgct gatttccttg aatctacatc
    19921 atattcatct gcaatatttt tagctaaagg acctgacata ataatagaga tggtgttgtt
    19981 tgccgtggca atatctgcga cacttaccaa actcgcaatt cctaattctg cgccacgctt
    20041 tgatttcact ttagagcgaa caaattgcaa caaccattca ataccaccat tgtgttgaat
    20101 aataccgact aaaccaccaa ttagcaacgc aatcatagca atatcttcca tgcttataat
    20161 acctttggac actgcatcta gtagccccat ccaaccgaat gaaccatcta tgagaccaat
    20221 gattccggct aataatgttc cgccaatcaa tacgataatg acatttacac ctaataatgc
    20281 caatactaat actaatatat acggtacaac tttaattaga ttataatcat agtttttagc
    20341 atgatttaaa gaaatgccat tcgttaagaa atacagaata ataatcgtta aaatagcacc
    20401 tggcaataca attttaaagt ttactctgaa tttatctttc attttcgtat gttgtgttct
    20461 aaccgcagca attgttgtat ctgaaatcat tgatagatta tcgccgaaca ttgcacctcc
    20521 aacaactgta gccattgcta gtgcagttgg tacatctgtc gcttgtgcaa atccgtaacc
    20581 aacaggtgct attgcagcaa cagtccctac tgacgttccc atagatatag aaacaaacat
    20641 acagatcaca aacaatccta caataattaa attttcaggg attaatgata tgcctaaatt
    20701 aactgtcgac tttacgccac ccattttttc agctgtattt gaaaatgcac ctgctaaaat
    20761 aaaaatcaac atcattaaaa taatgtttga atggcctgca cctttcgtga agacctcaac
    20821 ttttttagca aatgattctt ttcgattcat taataacgcc acaattaccg ttatcgtaat
    20881 tgcaacattt aatggcattg aagtaaaatc acctgtgata atacctacgc ctaaaaacaa
    20941 cgccacaaat aataacaagg ggaataatgc ccaagcattg ctctttttat gtacttccat
    21001 cctttttacc tgctttccaa ttaaaaatac ctctttctca caaacgatga agaaagaggt
    21061 ttccatgtgc tttacctgct tatcttcaaa ccattacggt tactggaatt ggcacattcg
    21121 agatgttgcc gaggcttcat agggccagtc cctccacctc tctagataag tgatgcttat
    21181 ttacgtttac gttacaagat aatccttagt acgtcaatca taaattaatc aggagtcgta
    21241 taatattttt cataaacaat cattgctact gtaataataa tcaaaacaat aatgctaata
    21301 acaagtaaaa gccaccattt aagcattaat gcaataaaaa tgaacacgat agacacactt
    21361 actaatatta atgatatgac tttaaattgc tgtgcgcttt gttcagaaat aacttttagc
    21421 tgtttgtttg atggacgcgt atttcttata ctgattccca gtatattttc taatatttga
    21481 accaatacga tacttattgc aaatataata attggtaaaa catcataggt ccctatagtt
    21541 aatgtataaa ttacaaatcc aatgtaaagt aaccctgaga caaaggctaa aaagtatgcg
    21601 acgtatttgt taaacttaat gatattcttt ttaacgtttt gatgtgtaag ccatacattc
    21661 gaaacaatcg caaccactac aaacagtgtg aataatatat ataatggcaa cttttgttca
    21721 ggaaaaacag tcactattcc aaaagctaat gctaaaatca aaattaagat agctctagat
    21781 actattaatg ccataataac aacccctttg tttaatatcg agtttgcaaa tttacgttta
    21841 tcagcatttc tatgatcagt acttctacgg gcagcatttc tatgtaattt acatcatctt
    21901 aacatataaa tacttcgcta tataattgaa aacatatcct attattcttt gtccattctg
    21961 acgtctaata tctaacctta ggcatttcac ttgttaatga atttaacttt cttccactaa
    22021 ccgtccctaa acccaatccc gcaacagttt ttaacttttt cgttgttgtc ctgacatctt
    22081 cattaagaaa gtttattctg cttaaaactt ataatccaca ccctgagcaa acgctcctta
    22141 tgacaaagta ttaaaataag ccgataaaga tacacacctt taccgactat ttaaaataca
    22201 cttcactaat tcattttaat ttacttgatt gaagtggcta aattaatatt atgttgttca
    22261 attaaaagct tcatacaaac ctaatctatt tgcactccac cgctaacacc gaacacttgt
    22321 ccagttgtat aacttgattc ttctgacgct aatagcacat aagttccaca taactcaaca
    22381 ggttgacctg cacgacctaa aggtgttttt tgaccaaatg ttgggatttt actttgaggt
    22441 tgtccaccag aaatttgtaa tggtgaccag aatggaccag gcgctacaca gttcactcta
    22501 attccttttg gtcctaattc ttctgaaaaa cttttagtta atgaaataat tgctgctttt
    22561 gaagcggcat aatcatgaag aataggacta ggattataac cttgtacaga tgatgtcgtc
    22621 gtaattgacg cacccggttt taaatattcc aaagcttttt gaactgtcca aaatagcgga
    22681 tagacattcg tttcaaatgt ttctgtaaat gcctcagttg taaatccatg aatatcatca
    22741 tgatactgtt gatgtccagc aactaaagta acattatcta agccacctaa ttgttgatat
    22801 gcttgttcaa caaggtcata gttgaactgc tcatctctta tatcaccagg aattaacact
    22861 gccttttgac cactttcttc aatcacttgg cgtacttctt gtgcatcttg ttcttcactc
    22921 ggaagatagt taatcgctac atctgcacct tctttagcat acgcaatcgc tgctgcacgc
    22981 cctattgctg agtcaccacc tgtaactaac attttatagc cttgtaagcg ttgatgacct
    23041 tggtaagacg cttcgccaca atcaggtgct ggcgtcattt cagattgtaa acccggtacc
    23101 tcttgttctt gtttttcata atccgttgtt ttaaattttg ttctaggatc ttgagctgcc
    23161 attttttaac atctccttat tcgcttaatg gttattattt acccaatctt cctaggaact
    23221 taatcatgat tacactaaaa attactttct tctttataaa aacaagctcg aattactcat
    23281 gcaatagtct ctttacaaat tcaacaaaat actcaggtac tttttccaga atcctttcat
    23341 ctggtttata ttgaggatga tgtaaatcat attcactatg agaaccaatt aacgcaaata
    23401 cactaggaaa atgttgacta taacctgaaa aatcttctcc aatcgtaagc ggcttttcca
    23461 tcatttccac cttatatcca acatgttggg ctactgctat tgctttatgc gtcaatacct
    23521 catcattcat cacagcgcca ggtaaatgtg tataatttaa attaattttc atattatatg
    23581 cttgagctaa cccgtccgca acatcttgta atcgtctttc tataagcttt cgcaccacag
    23641 ggtcaaaact ccgcactgtg ccttgtacat acgcatgatc agcaatgaca ttccaagtat
    23701 taccacatga tatttgccca attgttacta ccgcttcatc aaatgcagat agatttctac
    23761 taactatgga ttgaatacta ttaatcaatt gcgccaacac aataactgga tcgttgcatt
    23821 gttctggctt tgcagcatga ccacccacgc ctttaatatg aaactcaaaa cgatctactg
    23881 ctgatgtaat tgcccctgtt ttgattgcaa atgtacctac cggacgcgat gggtcattat
    23941 gaaaacccaa tactgcttgt acatctttta atgcatgtgt ttcaataatt ttaaaagcgc
    24001 catgtcctag ttcttctgct ggttgaaaaa tgaatttaac acgcccagta agagtgccct
    24061 caatttcttt taactttaca gctgtagcca aaatactagc catgtgaata tcatgaccac
    24121 acgcatgcat aacaccttca ttttcagatt taaaatcctg ttcaacaagc tcttgaatcg
    24181 gtaaagcatc aatgtcagcc cgaacagcta tacaactcgg tccttgtccc acttcagcaa
    24241 caagcccagt cgcaagtggt aagtctaata ttctaatatg atattctgtt aaaatatctt
    24301 taattttttg tgtagtctta aattctttat cggatagttc tggaaattga tgaaaatacc
    24361 ttctccaggc aacagcttga tcttttaatc ccatcggtca ttcccccttc tttaagtcaa
    24421 tgatatgttg tctaccctac gatgatcgtc tttgactatt aaacaatgat ttcacaacaa
    24481 tgtactcttg ttaattactt tcgctaatga tagacaattg tttaataata tcgtaacact
    24541 attgtcaaac tattctaact tttataatta agaatctata taaaaaacgt gttctcgaat
    24601 taacttgttt ttacaaacca caaaaagctc taaacattag tgtaaaccaa tgcttagagc
    24661 tttctaatta ttttatgctt taaaagataa tgtgttatct acgatgacct taccgtcttt
    24721 aataactttt tctgcgtgat tgataccaaa atggtatgga atatattcat gatttggtgc
    24781 atcccaaatt actaaattag ccttatcacc tgtgttaatt gtacccgcgt taatgtctat
    24841 tgctttagca gcattgaccg taacagcatt ccaaacttca ttaggtgata gctttaattt
    24901 caaggctgca atcgccataa caagttgtaa gttgtttgtg acactactac cagggttata
    24961 atcagttgct aatgcaatcg caccgttatt gtctagcatg cctcttgcat ctgcataatc
    25021 ttctttacct aaatagaacg tcgttgcagg taagaggaca gctacagtat cactatttcg
    25081 caacttttct tttcctttat cactagaagc tactaagtgg tctgctgata ttgcttgttc
    25141 atcaattgct aattccagtc cgcctaacgg atcaatttca tccgcatgta ttttcacttt
    25201 aaaatttgct tctttggctt tttgcatata atgttgcgat tgttctattg taaatacacc
    25261 tgtttcacag aaaatatccg caaaatctgc atattgtttt acttccggaa gtaacgcaat
    25321 catttcttct aaaaatgcct catttgaact tgcctcttta ggtacagcat gaggccctag
    25381 gaaagtatgt ttcatgtcta aatcatattt ctcagctaaa cgattagaca ctttcaattg
    25441 cttcagttca ttttctctat ctaatccata accactctta ctttcaactg caagcacgcc
    25501 gtgtttaatc atagtaagca aatcatgctc tgctttttta aacaagtcat cttcggatgt
    25561 ttctctagta gcattaacgg tagataatat gccaccaccc atttctaata tttcaaggta
    25621 agacttacct tgacgtttta atgacatctc atgttctcga gatccaccaa atgttaaatg
    25681 ggtatgagca tctactaatg ccggagaaac tacttttcca ctagcatcaa tcgtctcagt
    25741 cgcatcgtag tcatctgtat gttgtccagc atatacaatt ttgccatctt taatgacaac
    25801 tgtaccattt ttcacaacat ttaattcatc taattcctta cccttcaaag gtttatctgt
    25861 tgacctcggt aaaattaatt ctgctatatg attaattatt aaatcattca ttacttatca
    25921 cctgctttat caatcattgg aatatgaata cctttttctt tagctgtttg aatagcgatg
    25981 tcatagccag catcaacatg tcgggcaaca cccatgcctg gatcagtagt caatacgcgt
    26041 tccaatcttc tttcagcacg ctctgatcca tctgctacaa caaccatacc cgcatgaagt
    26101 gaatatccca tgccaacacc gccaccgtga tggaatgaaa tccatgaacc acctgcagct
    26161 gtgttaatta gtgcattcag tacagcccaa tcaccaaccg cgtcactacc atctttcata
    26221 ctttctgttt cacggttagg actagcaact gaaccagcat ctaaatggtc tcgtccaata
    26281 acaattggtg ctgaaatttc accgtcacgt acaagacgat ttaaagctaa gcccattttc
    26341 gctctttctc catagcctaa ccaagcaata cgtgatggta gtccttgata tgaaattttt
    26401 tcttcagcta aatcaagcca tcttaataac ttttcatttt ctgggaaaag tttgcgcatt
    26461 tcttcatccg cacgctcgat atcttttgga tcaccactca acgcagcaaa gcggaatggc
    26521 cctttacctt cacagaataa tggtctaatg taagctggta caaaacctgg gaagtcaaaa
    26581 gcatttttca ctccgttatt gaaggctact tgacgaatat tgttaccata atcaaatgct
    26641 acagcgccac gtttttggaa ttcaagcatt aattcaacat gctttgccat tgaagcttgt
    26701 gacagttcaa catatttttt cggatctttt tcacgcaata ctttcgcttc ttctacagag
    26761 tatccttgtg gcacatatcc atttagcgga tcatgtgcac ttgtttggtc agtaataatg
    26821 tcaattttaa atcctttttc tagaatcgct tgatggatgt ctacagcatt tccaactaac
    26881 ccgattgata atccttctcc acgttttttc gcctcttctg ctaattttaa tgcttcatct
    26941 aaatcagctg ttttaacatc acagtatttc gtatcaattc gcttatcaac acgtgtttca
    27001 tcaacatcca cgcaaattgc taccccatga ttcatagtaa ttgctaacgg ttgcgcacca
    27061 cccataccac ctaaacctgc tgtcagtgta acagtgcctg ctaaatctcc attaaagtgt
    27121 tgattaccta gctcggcaaa tgtctcataa gtaccttgca caataccttg agaaccaata
    27181 tatatccaac taccggctgt catctgtcca tacatgatta aacctttttt atctaattca
    27241 ttaaaatgat cccagtttgc ccattcaggc actaatactg aatttgaaat taatacacgt
    27301 ggcgcttctt catgtgtttt aaatacagca actggctttc ctgattgtac taacattgtc
    27361 tcatctgatt ctaattctcg taacgttttc tctattgctt caaaagcttc ccaattacga
    27421 gctgcttttc caataccacc ataaacaact aaatcttctg gtctttcagc aacttctggg
    27481 tctaaattgt tgtataacat tctaagtact gcttcttgtt cccaaccttt acactcaata
    27541 ctcaaacctt tttttgcttg aatttttctc ataaaattcg ctcctgttct ttttagaagt
    27601 taattccact aaatttaaaa cgcttacatt attatcttca atattcatta tagtatgtta
    27661 aaatatagcc aacaaatata aataaactaa ttatccatag cttgaatcta taaataaaag
    27721 gagcaaaaca catgaaaatt attcagttag aatatttctt ggctatcgtg aaatataata
    27781 gttttactaa agctgcacaa tttttacata ttagccagcc atctttaact gctacgatta
    27841 aaaaaatgga agcagattta ggttatgact tatttacacg ttcaacaaaa gacatcaaaa
    27901 ttaccgaaaa aggaatacag ttttatcgtt atgcgagcga attagttcaa caatatcgat
    27961 ccacgatgga aaaaatgtat gatttaagcg ttacatcaga accaaggata aaaattggga
    28021 ctcttgaatc tacgaatcaa tggattgcga atttaattcg aaagcaccat tccgactacc
    28081 ctgaacagca atatcgttta tatgaaatac atgataaaca tcaatctata gagcaattac
    28141 tgaattttaa tattcattta gctataacaa atgaaaaaat aacccacgaa gatataagat
    28201 ccattccttt atatgaggaa tcttacattt tattagcacc taaagaaaca tttaaaaatc
    28261 aaaattgggt agatgttgaa aatttgccac tcatattgcc aaacaaaaat tctcaagtgc
    28321 gcaaacactt agatgactat tttaatagaa gaaatattcg tccaaatgtc gttgtagaaa
    28381 cagatcgatt cgaatcagca gttggatttg ttcatcttgg cttaggttac gctatcattc
    28441 cgagatttta ttaccaatca tttcacacgt ccaatttaga atataaaaaa attcgtccaa
    28501 acttaggccg aaaaatttat atcaattatc ataaaaagcg caaacactcc gaacaagtac
    28561 atacattcgt acaacaatgc caagattatt tatatggact tttagaggct ctttaactta
    28621 agt
//
LOCUS       DALMNS010000026        27677 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.026, whole genome shotgun sequence.
ACCESSION   DALMNS010000026 DALMNS010000000
VERSION     DALMNS010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 27677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27677
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.026"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(11..625)
                     /locus_tag="O6Y56_000929"
     CDS             complement(11..625)
                     /locus_tag="O6Y56_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YktB family protein"
                     /protein_id="HDB5574208.1"
                     /translation="MTKYTFKPKDFKAFNVEGLDARMEALNEYIRPQLHELGEYFSDF
                     FTSQTGETFYPHVAKHARRSVNPPKDTWVAFATNKRGYKMLPHFQIGMFEDQLFVMFG
                     IMHEAKDKATRAKVFERKFKAIQQLPDDYRVCLDHMKPDKPFIKDLTDDDLKEAIQRA
                     INVKKGEFFIARAITPQDKRLKSDKAFIAFLEETFDQFLPFYSA"
     gene            782..1609
                     /locus_tag="O6Y56_000930"
     CDS             782..1609
                     /locus_tag="O6Y56_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HDB5574209.1"
                     /translation="MALYGFAQGLIQEAGIRIKQLMEQNLTIETKSNPNDLVTNVDKA
                     TEDFIFDTILETYPNHQVLGEEGHGHDIDTSKGTVWVVDPIDGTLNFVHQQENFAISI
                     GIYIDGKPYAGFVYDVMADVLYHAKVGEGAYRGSQPLKPLNDSNLRQSIIGINPNWLT
                     KPVLGEIFKDVVNISRSARAYGSAALEIVSVATGNLEAYMTPRLQPWDFAGGLVILNE
                     LDGQASNLLGEPLTIGGPNSVLVGNRGVHREILDVYLEPHRDALIQLHEQRFKRKSK"
     gene            complement(1763..1954)
                     /locus_tag="O6Y56_000931"
     CDS             complement(1763..1954)
                     /locus_tag="O6Y56_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaF family protein"
                     /protein_id="HDB5574210.1"
                     /translation="MKQKKSKNIFWVFSILAVIFLILFSFAVGASNVPMMILTFILLV
                     ATFGIGFTTKKKYRENDWL"
     gene            2056..3903
                     /gene="typA"
                     /locus_tag="O6Y56_000932"
     CDS             2056..3903
                     /gene="typA"
                     /locus_tag="O6Y56_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDB5574211.1"
                     /translation="MTNKREDVRNIAIIAHVDHGKTTLVDELLKQSGIFRENEHVDER
                     AMDSNDIERERGITILAKNTAVDYKGTRINILDTPGHADFGGEVERIMKMVDGVVLVV
                     DAYEGTMPQTRFVLKKALEQNLKPVVVVNKIDKPSARPEGVVDEVLDLFIELEANDEQ
                     LEFPVVYASAVNGTSSLDPEKQDDNLQSLYETIIDYVPAPIDNSDEPLQFQVALLDYN
                     DYVGRIGIGRVFRGKMRVGDNVSLIKLDGTVKNFRVTKIFGYFGLKRLEIEEAQAGDL
                     IAVSGMEDINVGETVTPHDHQEALPVLRIDEPTLEMTFKVNNSPFAGREGDFVTARQI
                     QERLNQQLETDVSLKVSNTDSPDTWVVAGRGELHLSILIENMRREGYELQVSKPQVII
                     KEIDGVMCEPFERVQCEVPQENAGAVIESLGARKGEMVDMTTTDNGLTRLIFNVPARG
                     MIGYTTEFMSMTRGYGIINHTFEEFRPRIKAQIGGRRNGALISMDQGSASTYAILGLE
                     DRGVNFMEPGTEVYEGMIVGEHNRENDLTVNITKTKHQTNVRSATKDQTQTMNRPRIL
                     TLEEALQFINDDELVEVTPESIRLRKKILNKNVREKEAKRIKQMMQENE"
     gene            complement(4043..4210)
                     /locus_tag="O6Y56_000933"
     CDS             complement(4043..4210)
                     /locus_tag="O6Y56_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaI family protein"
                     /protein_id="HDB5574212.1"
                     /translation="MRQVQCIICDAKVFIDERTTESKRLKNNPIRTFMCDDCKSRLDT
                     PKQRAQHYPLD"
     gene            complement(4212..4694)
                     /locus_tag="O6Y56_000934"
     CDS             complement(4212..4694)
                     /locus_tag="O6Y56_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574213.1"
                     /translation="MIQIKGAVKFPITLDSTTWIFDDRKVSIEDLEKGVFDGSKPIDF
                     EDNHEWNRAILEGQTNPPTLNSEIKYKKRAMLEGSFVINMTPFFKHSEPHDSATTIRL
                     SNEHDHLDIPIDLLPYLFFQFAKDGKRLYSDNGVDSFIYNQEDGYSNRINHVTHIEVI
                     "
     gene            4835..5110
                     /locus_tag="O6Y56_000935"
     CDS             4835..5110
                     /locus_tag="O6Y56_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaN family protein"
                     /protein_id="HDB5574214.1"
                     /translation="MAKQTTMKNAALKQLTKDADEILHLIKVQLDNLTLPSCPLYEEV
                     LDTQMFGLQKEVDFAVKLGLVDREDGKQIMLRLEKELSKLHEAFTLV"
     gene            5424..6650
                     /gene="ftsW"
                     /locus_tag="O6Y56_000936"
     CDS             5424..6650
                     /gene="ftsW"
                     /locus_tag="O6Y56_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HDB5574215.1"
                     /translation="MKNFRSILRYIGKTSKFIDYPLLVTYIVLSLIGLVMVYSASMVP
                     ATKGTLTGGIDVPGTYFYNRQLAYVIMSFIIVFFIAFLMNVKLLSNIKVQKGMIITIV
                     SLLLLTLVIGKDINGSKSWINLGFMNLQASELLKIAIILYIPFMISKKMPRVLSKPKL
                     ILSPIVLALGCTFLVFLQKDVGQTLLILIILVAIIFYSGIGVNKVLRFGIPAVLGFLV
                     VFVIALMAGWLPSYLTARFSTLTDPFQFESGTGYHISNSLLAIGNGGVFGKGLGNSAM
                     KLGYLPEPHTDFIFAIICEELGLIGGLLVITLEFFIVYRAFQFANKTSSYFYKLVCVG
                     IATYFGSQTFVNIGGISATIPLTGVPLPFISFGGSSMISLSIAMGLLLIVGKQIKVDQ
                     QRKKQQQKVDIRRQFN"
     gene            7204..10656
                     /locus_tag="O6Y56_000937"
     CDS             7204..10656
                     /locus_tag="O6Y56_000937"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate carboxylase"
                     /protein_id="HDB5574216.1"
                     /translation="MKQIKKLLVANRGEIAIRIFRAAAELDISTVAIYSNEDKSSLHR
                     YKADESYLVGSDLGPAESYLNIERIIDVAKQANVDAIHPGYGFLSENEQFARRCAEEG
                     IKFIGPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIKSYELAKEFAEEAGFPLMI
                     KATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDNPKHIEVQVIG
                     DEHGNIVHLFERDCSVQRRHQKVVEVAPSVGLSPTLRQRICDAAIQLMENIKYVNAGT
                     VEFLVSGDEFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAGADLFGEEINMPQQK
                     DITTLGYAIQCRITTEDPLNDFMPDTGTIIAYRSSGGFGVRLDAGDGFQGAEISPYYD
                     SLLVKLSTHAISFKQAEEKMVRSLREMRIRGVKTNIPFLINVMKNKKFTSGDYTTKFI
                     EETPELFDIQPSLDRGTKTLEYIGNVTINGFPNVEKRPKPDYELASIPTVSSSKIASF
                     SGTKQLLDEVGPKGVAEWVKKQDDVLLTDTTFRDAHQSLLATRVRTKDMINIASKTAD
                     VFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNVLFQMLLRASNAVGYKNY
                     PDNVIHKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKISEGTICYTGDILN
                     PERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKAAVDLPIHL
                     HTHDTSGNGLLTYKQAIDAGVDIIDTAVASMSGLTSQPSANSLYYALNGFPRHLRTDI
                     EGMESLSHYWSTVRTYYSDFESDIKSPNTEIYQHEMPGGQYSNLSQQAKSLGLGERFD
                     DVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQNDLDEQSVITDGYKLDFPESVVS
                     FFKGEIGQPVNGFNEDLQAVILKGQEALTARPGEYLEPVDFEKVRELLEEEQQGPVTE
                     QDIISYVLYPKVYEQYIQTRNQYGNLSLLDTPTFFFGMRNGETVEIEIDKGKRLIIKL
                     ETISEPDENGNRTIYYAMNGQARRIYIKDENVHTNANVKPKADKSNPSHIGAQMPGSV
                     TEVKVSVGETVKANQPLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIE
                     KATD"
     gene            complement(10740..11651)
                     /locus_tag="O6Y56_000938"
     CDS             complement(10740..11651)
                     /locus_tag="O6Y56_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000467197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme A synthase"
                     /protein_id="HDB5574217.1"
                     /translation="MFGKKNLKWLGVVATLMMTFVQLGGALVTKTGSADGCGSSWPLC
                     HGALIPEFFPIDTIIELSHRAVSALSLLMVLWLVITAWKHIGYIKEIKPLSIISVGFL
                     LLQALIGAAAVIWQQNDYVLALHFGISLISFSSVFLITLIIFSIDQKYEADELYIKKP
                     LRRLTWLMAIIIYCGVYTGALVRHADASLAYGGWPLPFHDLVPHSEQDWVQLTHRIMA
                     FIVFTIIMITYIHAIKNYPNNRTVHYGYTAAFILVILQVITGALSIMTNVNLIIALFH
                     ALFITYLFGMTTYFIMLMLRSVRSDKQ"
     gene            12091..13002
                     /locus_tag="O6Y56_000939"
     CDS             12091..13002
                     /locus_tag="O6Y56_000939"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HDB5574218.1"
                     /translation="MSKEHTLSQNISRVNFKELQQIIKMGLVQGNLIPAFAGAWLAVV
                     MTNHSFLSSIPQILLMLLGSTLIMGGACALNNYYDQDIDRIMPSKQNRPTVNNRITDQ
                     NLLLLSFGMMLVGEICLFLLNIPSGVLGLMGIVGYVSYYSIWSKRHTTWNTVIGSFPG
                     AVPPLIGWVAIEGQISLTAIALFLVVFCWQPIHFYALAIKRKDEYALANIPMLPSVKG
                     FKRTRVSMFVWLIILLPVPLLLINLGIVFVVLATLLNLGWIALGLTTFKKNSDQTKWA
                     TQMFIYSLNYLVIFFVLAVIVSLLTLI"
     gene            13027..13488
                     /locus_tag="O6Y56_000940"
     CDS             13027..13488
                     /locus_tag="O6Y56_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF420 domain-containing protein"
                     /protein_id="HDB5574219.1"
                     /translation="MGVPILPTISTTFIVISAILIAIGWRLIWKREINKHKNVMLAAA
                     IFALTFFLIYASRTIFIGNTAFGGPASIKKYYTIFLFFHINLATIGGILGLVQIITAF
                     KDKYNVHRKFGPFASVIWFCTAITGVAVYLLLYVLYPGGETTSLIKATFGH"
     gene            13810..14847
                     /locus_tag="O6Y56_000941"
     CDS             13810..14847
                     /locus_tag="O6Y56_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499615.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HDB5574220.1"
                     /translation="MKKLIIRVVGVLFLVGFLIYLFYSPRLKFDVLENPNKGNKVNRS
                     EQVNKSNNHAENPKPKEGVGTWVGKDIKVLTSKFGQADRVYPFRDGYKNYVFKDKNSY
                     YIVSTKREEIVSVYATGEKVNVSPLKIGQHSAEIFNHTSINPEPSFKVDGKKYEFELS
                     DEDLKTQTLIKYGNIYAQVYSDQQSKKVLSVRFLTKEMLADIEPYQLNSNSTSEEHNK
                     RPAEQNPNQLISLYEVTNEMRKLKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTE
                     DALRGQLDKNHVTYKTTAQNVGYAFNDVPTLIHSWMNSDIHRSRLLNSKYDEMGGDVM
                     RDYYSLIFLEK"
     gene            14863..15297
                     /locus_tag="O6Y56_000942"
     CDS             14863..15297
                     /locus_tag="O6Y56_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF family regulator"
                     /protein_id="HDB5574221.1"
                     /translation="MINEASLAILDDIDELADMIVASDIYASFEQAKQALENNDEAHL
                     LYQSFLKSKEKYDEVMRFGKYHPDYKKVMLETRQRKRAYEMLDVVMHYKAREMALQHL
                     IDEVVTKIAYAVSEHVKIETGNPFFQTSHSGCATGGSCNCSL"
     gene            complement(15378..16307)
                     /locus_tag="O6Y56_000943"
     CDS             complement(15378..16307)
                     /locus_tag="O6Y56_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000757587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HDB5574222.1"
                     /translation="MKKVNRNILNAVLVGAGFVSSLFMINKNKVITKKQTIPAFFKGN
                     APYIFAHRGGMALRPEQTQLAFDYAKQLGVDGFETDVRLTKDQQLIVFHDATVDRTTN
                     GSGKVSAHTLAELKKLDAAYHFKDINGLTPYRGHAHTAILTFDELLKQYPDMYINVDL
                     KDAPESYEGSIAPQIMFDTIAENQAFDRVLVTSFYKEQIVRFNKIAQGSVAIGASQQE
                     VTEAFLKYHLLGGRYYQPLAQTFQMPTHFKGIDLTSSRFIKWLNDMNVIPGYYGVNSI
                     DLMNDLYQKGAHTIVTDRPDLAQQFKQTINKKQ"
     gene            16546..16800
                     /locus_tag="O6Y56_000944"
     CDS             16546..16800
                     /locus_tag="O6Y56_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbG family protein"
                     /protein_id="HDB5574223.1"
                     /translation="MNLIPRTSIVVYLKHMKHERQIRKYGHIVHSNRDRKFVIMYVNE
                     QDVDQIVHKLMQLKYVRHIDGSPYKYLKKTYEKEKHEIYN"
     gene            complement(16803..17192)
                     /locus_tag="O6Y56_000945"
     CDS             complement(16803..17192)
                     /locus_tag="O6Y56_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574224.1"
                     /translation="MKQTFITLGEGLTDLFEFMTMIEYNHQRIDKIIYFHSPQAENKK
                     SSVAIIMNPTTGNHFQAFYIMINAIKYPYPDSNKKFQMINDCAEKFDIPILGIDVQPP
                     QAFHDLSLYYNYLISVLRLQKWIPELQ"
     gene            17262..17804
                     /gene="rsmD"
                     /locus_tag="O6Y56_000946"
     CDS             17262..17804
                     /gene="rsmD"
                     /locus_tag="O6Y56_000946"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002470236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HDB5574225.1"
                     /translation="MRVIAGKHKSKALESMEGRNTRPTMDKVKEGIFNSLYDVSGIGL
                     DLFAGSGALGIEALSRGMDKVIFVDQNFKAVKVIKSNLSNLDLEAQSEVYKNNADRAL
                     KALSKRDIQFDVIFLDPPYNKGLIDKALKLISEFNLLKENGIIVCEFSNHEEIDYQPF
                     NMIKRYHYGLTDTLLLEKGE"
     gene            17806..18288
                     /gene="coaD"
                     /locus_tag="O6Y56_000947"
     CDS             17806..18288
                     /gene="coaD"
                     /locus_tag="O6Y56_000947"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDB5574226.1"
                     /translation="MEHTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNSKKE
                     GTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELR
                     LTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRADISEFVPPYVEKALKKKFK
                     "
     gene            complement(18350..19489)
                     /locus_tag="O6Y56_000948"
     CDS             complement(18350..19489)
                     /locus_tag="O6Y56_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HDB5574227.1"
                     /translation="MKSVGLITEYNPFHNGHQYHINQSKKLTNADITIAIMSGNFVMR
                     GEPAIYNKFTRAKMALSTADLVIELPATASLSSGDHFAELAVKVADYMSVDTIAFGSE
                     NNDIKTLKQLAHSINEIEQSESFSQKVKEGKSYPRIISELLEHHEALASPNNILGISY
                     LKAIAKHAKNINAISIKRENAQHHDSLIQHHQFASGTSIRTSIISQDDHWHHVVPKDI
                     QHLYVTPHITLNQIFPYLKYQIIAMTTESLKNIYTVTEGFENRLKSNINEATDFHHFV
                     KSLKTKRYTYTHIQRLLMNVLLNIKPTDVTRNIHAVKVLAMNDRGRQYLKHLKTAFPE
                     RQYITNINKSNAHYFTNEIKATHIYNAISGQQQTDFNTPVIQQYR"
     gene            19616..20173
                     /locus_tag="O6Y56_000949"
     CDS             19616..20173
                     /locus_tag="O6Y56_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HDB5574228.1"
                     /translation="MKWSITQLRKYQGKPFEFDQTVSFDNLKESLDLIDLSPITIQGQ
                     LTIKSTEVVADIHITGTYTMPCARTLVPVKVPLDVTTTEVFDLEGYNQYNDDQDDVDE
                     HYHIIKDGMVNLHDIVEDIVIIEKPMRAYSEQSDQMLTVGNGWEVIDEDQLDELAKQQ
                     EQDDSESRQVDPRLQKLQQLYDKEQ"
     gene            20253..20426
                     /gene="rpmF"
                     /locus_tag="O6Y56_000950"
     CDS             20253..20426
                     /gene="rpmF"
                     /locus_tag="O6Y56_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDB5574229.1"
                     /translation="MAVPKRRTSKTRKNKRRTHFKISVPGMTECPNCGEYKLSHRVCK
                     NCGSYNGEEVAAK"
     gene            complement(20580..22505)
                     /gene="isdB"
                     /locus_tag="O6Y56_000951"
     CDS             complement(20580..22505)
                     /gene="isdB"
                     /locus_tag="O6Y56_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme uptake protein IsdB"
                     /protein_id="HDB5574230.1"
                     /translation="MNKQQKEFKSFYSIRKSSIGVASVAISTLLLLMSNGEAQAAEET
                     GGTNTEAQPKTEAVASPSTTTEKAPEAKPVANAVSVSNKEVEAPTSETKEAKEVKAPK
                     ETKEVKPAAKADNNTYPILNQELREAIKNPAIKDKDHSAPNSRPIDFEMKKENGEQQF
                     YHYASSVKPARVIFTDSKPEIELGLQSGQFWRKFEVYEGDKKLPIKLVSYDTVKDYAY
                     IRFSVSNGTKAVKIVSSTHFNNKEEKYDYTLMEFAQPIYNSADKFKTEEDYKAEKLLA
                     PYKKAKTLERQVYELNKIQDKLPEKLKAEYKKKLEETKKALDEQVKSAITEFQNVQPT
                     NEKMTDLQDTKYVVYESVENNESMMDTFVKHPIKTGMLNGKKYMVMETTNDDYWKDFM
                     VEGQRVRTISKDAKNNTRTIIFPYVEGKTLYDAIVKVHVKTIDYDGQYHVRIVDKEAF
                     TKANADKSNKKEQQDNSAKKETTPAKPSKPTPSPVEKESQKQDSQKDDNTQSPSVEKE
                     NDSSSESGKDKTPATKPAKAEVESSSTTPTKVVSTTQNVAKPTTASSETTKDVVQTSA
                     GSSEAKDSAPLQKANIKNTNDGHTQSQNNKNTQENKAKSLPQTGEESNKDMTLPLMVL
                     LALSSIVAFVLPRKRKN"
     gene            complement(22706..23770)
                     /gene="isdA"
                     /locus_tag="O6Y56_000952"
     CDS             complement(22706..23770)
                     /gene="isdA"
                     /locus_tag="O6Y56_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG-anchored heme-scavenging protein IsdA"
                     /protein_id="HDB5574231.1"
                     /translation="MTKHYLNSKYQSEQRSSAMKKITMGTASIILGSLVYIGADSQQV
                     NAATEATNATNNQNAQVSQATSQPINFQVQKDGSSEKSHMDDYMQHPGKVIKQNNKYY
                     FQAVLNNASFWKEYKFYNANNQELATTVVNDDKKADTRTINVAVEPGYKSLTTKVHIV
                     VPQINYNHRYTTHLEFEKAIPTLADAAKPNNVKPVQPKPAQPKTPTEQTKPVQPKVEK
                     VKPTVTTTSKVEDNHSTKVVSTDTTKDQTKTQTAHTVKTAQTAQEQNKVQTPVKDVAT
                     AKSESNNQAVSDNKSQQTNKVTKQNEVHKQGPSKDSKAKELPKTGLTSVDNFISTVAF
                     ATLALLGSLSLLLFKRKESK"
     gene            23979..24662
                     /gene="isdC"
                     /locus_tag="O6Y56_000953"
     CDS             23979..24662
                     /gene="isdC"
                     /locus_tag="O6Y56_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme uptake protein IsdC"
                     /protein_id="HDB5574232.1"
                     /translation="MKNILKVFNTTILALIIIITTFSNSANAADSGTLNYEVYKYNTN
                     DTSIANDYFNKPAKYIKKNGKLYVQITVNHSHWITGMSIEGHKEKIISKNTAKDERTS
                     EFEVSKLNGKIDGKIDVYIDEKVNGKPFKYDHHYNITYKFNGPTDVAGANAPGKDDKN
                     SASGSDKGSDGATTGQSESNSSNKDKVENPQTNAGTPAYIYAIPVASLALLIAITLFV
                     RKKSKGNVE"
     gene            24662..25738
                     /gene="isdD"
                     /locus_tag="O6Y56_000954"
     CDS             24662..25738
                     /gene="isdD"
                     /locus_tag="O6Y56_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated surface determinant protein IsdD"
                     /protein_id="HDB5574233.1"
                     /translation="MRNVKQIATKSIIAIISLGILTYTTMIGSVLADEIKYPSAKFNQ
                     PEAKDKTELTSSIFNEKIKENKALELLIFNQENKNVTEEQQLVDEKAQLISDMTGKIY
                     LQVKLKGQIDKEQLVFQNDKNEEFPFFIKDEKDDTIVRILIEQHMDKINMHVKTLAEK
                     KDLDNKEMVYSIHFKEKKVQHDDAKEVPSKHQNQENNQDQLKKDIDDKKDSQKSDIKE
                     RRTSLFTEKGLNDIPVQKDKVQQDSNKKIENERPKASGTLKVENSPPTVKKVENNHKE
                     QPKHKDEKSKKEKKKVVEKEKALPAFNRDDDSKNSSQLSSDIKELDEPNHKKQYMLFA
                     AGIVLATILLISAHLYSRKRGNQV"
     gene            25735..26613
                     /gene="isdE"
                     /locus_tag="O6Y56_000955"
     CDS             25735..26613
                     /gene="isdE"
                     /locus_tag="O6Y56_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006190048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     IsdE"
                     /protein_id="HDB5574234.1"
                     /translation="MRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALT
                     MTLDKLDLPIVGKPTSYKTLPNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVSTIKDE
                     MQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKA
                     AKQKKHPKVLILMGVPGSYLVATDKSYIGDLVKIAGGENVIKVKDRQYISSNTENLLN
                     INPDIILRLPHGMPEEVKKMFQKEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDA
                     DKAMTQLYDLFYKDKK"
     gene            26626..27591
                     /gene="isdF"
                     /locus_tag="O6Y56_000956"
     CDS             26626..27591
                     /gene="isdF"
                     /locus_tag="O6Y56_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000594537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin ABC transporter permease protein IsdF"
                     /protein_id="HDB5574235.1"
                     /translation="MIKNKKRLLFLCLLVILIATAYISFVTGTIKLSFNDLITKFTTG
                     SNEAVDSIIDLRLPRILIALMVGAMLAVSGALLQAALQNPLAEANIIGVSSGALIMRA
                     LCMLFIPQLYFYLPLLSFIGGLIPFLIIILLHSKFRFNAVSMILVGVALFVLLNGVLE
                     ILTQNPLMKIPQGLTMKIWSDVYILAVSALLGLILTLLLSPKLNLLNLDDVQARSIGF
                     NIDRYRWLTGLLAVFLASATVAIVGQLAFLGIIVPHVVRKLVGGNYRVLIPFSTVIGA
                     WLLLVADLLGRVIQPPLEIPANAILMIVGGPMLIYLICQSQRNRI"
BASE COUNT         9381 a         3922 c         4974 g         9400 t
ORIGIN      
        1 acaaagttat ttatgcagaa taaaatggta agaactgatc gaaggtttct tctaaaaatg
       61 caataaatgc tttgtcactt tttaatcttt tatcttgtgg tgtgattgca cgcgctataa
      121 agaattcacc tttttttaca ttgatggctc tttgtatcgc ttcttttaaa tcatcatccg
      181 ttaaatcttt aataaatggt ttatcaggtt tcatatgatc taagcaaaca cgataatcat
      241 caggtaattg ttgaatagct ttaaattttc tttcaaaaac ttttgcacgt gttgctttat
      301 cttttgcttc atgcatgatt ccaaacataa caaacagttg atcttcaaac ataccaattt
      361 ggaaatgagg taacatttta tagcctcttt tgtttgttgc aaaagcaacc catgtatctt
      421 taggaggatt cacacttctt ctagcatgct ttgctacgtg aggataaaat gtttcaccag
      481 tttgacttgt aaagaagtca ctaaaatatt ctcctaattc atggagttgt ggtcgtatgt
      541 attcgtttaa agcttccatt cgtgcgtcta agccttctac gttgaacgct ttgaaatctt
      601 taggtttaaa tgtgtatttt gtcatagagt acctcctgta tagtgtttaa aaatattgta
      661 gcatatgttt tatcaatagt agcttaagat gctctcatta aaattagtat tttcattttt
      721 atcataagaa gttattttta taaaatgttg atgtataata aagatgttag gagatgatgt
      781 tatggcactt tatggatttg cccaaggact tattcaagaa gcaggaatta gaattaaaca
      841 attgatggag caaaatttaa caattgaaac aaagtcaaat ccgaatgacc ttgttacaaa
      901 tgtagataaa gcaacagaag attttatttt tgatacaatt ttagaaacat atcccaatca
      961 tcaagtatta ggtgaagaag ggcatggtca tgacatcgat acttccaaag gtacggtatg
     1021 ggttgttgac ccaatagacg gtacattgaa ttttgttcat caacaagaaa atttcgcgat
     1081 ttcaattggt atttatatcg atggtaaacc ttatgcaggt tttgtatatg atgttatggc
     1141 tgatgtctta tatcatgcta aagtagggga aggtgcatat cgtggtagcc aacccttgaa
     1201 accattgaat gattctaatc taagacaaag cattattggg atcaatccga actggttgac
     1261 gaaacctgtg ctaggagaga tttttaagga tgtcgtaaat atttcaagaa gtgcaagggc
     1321 atatggtagt gcagcgcttg aaattgtttc tgtcgctacc ggtaatttag aagcatatat
     1381 gacacctaga ctccaaccgt gggattttgc tggaggacta gtcattttaa atgagttgga
     1441 cggtcaagct tctaatttat taggtgaacc gctaacaatt ggtggtccaa actcagtttt
     1501 agttggtaat cgtggtgttc atagagagat cctcgatgta tatttagagc cacatcgcga
     1561 tgcgttaata caattacatg aacaacgatt taaaagaaaa tcaaaataat taccaaaagc
     1621 gtaatatgta gtcctaacaa ttaggtaaca tattacgctt ttatatctta aataataaaa
     1681 acacgcgcca atataaaacc atttaaatgt tcatcatgaa catgtgtggt ctttaatcaa
     1741 cgcgtgttat tgtcgatata acttatagcc aatcgttttc tcgatatttt ttctttgtag
     1801 taaatccaat tccaaaggtt gcaacgagta atataaatgt taaaatcatc attggtacat
     1861 ttgatgcacc aacagcaaaa ctaaataata ttaagaaaat aacagctaat atagaaaata
     1921 cccaaaagat atttttagat tttttttgtt tcatcctatc cccacctttt gcttatcttt
     1981 tctcaattat atgatataat aaaaaagttg taattaaaag tgggatttta cttaagaaag
     2041 aaggaaacta tttatatgac taataaaaga gaagatgtcc gcaatatagc aattattgct
     2101 cacgttgacc atggtaaaac aactttagta gatgagttgt taaaacaatc tggtatattc
     2161 agagaaaatg aacatgtcga tgaacgtgca atggactcta acgatatcga aagagagcgt
     2221 ggaattacga ttctagccaa aaatacggct gttgattata aaggtacacg tatcaatatt
     2281 ttggatacac caggacatgc agactttggt ggagaagtag aacgtattat gaaaatggtt
     2341 gatggggttg tcttagtagt agatgcgtat gaaggtacaa tgcctcaaac acgttttgta
     2401 cttaaaaaag cgctagaaca aaacctaaaa cctgttgttg ttgttaataa aattgataaa
     2461 ccatcagcac gtccagaggg tgttgtagat gaagttttag atttatttat tgaattagaa
     2521 gcaaacgatg aacaattaga attccctgtt gtttatgctt cagcagtaaa tggtacatct
     2581 agcttagatc ctgaaaaaca agatgataat ttacaatcat tatatgaaac aattattgat
     2641 tatgtaccag ctccaattga taacagtgat gagccattac aattccaagt agcattgttg
     2701 gactacaatg attatgttgg acgtattggt attggtcgtg tattcagagg taaaatgcgt
     2761 gtcggagata atgtatcact aattaaatta gacggtacag tgaaaaactt ccgtgtaact
     2821 aaaatctttg gttactttgg attaaaacgt ttagaaattg aagaagcgca ggctggagat
     2881 ttaattgctg tttcaggtat ggaagacatt aacgttggtg aaactgtaac accacatgac
     2941 catcaagaag cattgccagt tctacgtatt gatgagccta ctcttgaaat gacatttaaa
     3001 gttaacaatt caccatttgc tggccgtgaa ggtgactttg taacagcgcg tcaaattcaa
     3061 gaacgtttaa accaacaatt agaaacagat gtatctttga aagtttctaa cacagattct
     3121 ccagatacat gggtagttgc tggtcgaggt gaattgcatt tatcaatcct tattgaaaat
     3181 atgcgtcgtg aaggttatga attacaagtt tcaaaaccac aagtaattat taaagaaatt
     3241 gatggtgtaa tgtgtgaacc atttgaacgt gtgcaatgtg aagtgccaca agaaaatgca
     3301 ggtgcagtta ttgaatcatt aggtgcacgt aaaggtgaaa tggttgatat gactacaact
     3361 gataatggac ttacacgttt gatctttaat gtgccggctc gtggtatgat tggttatacg
     3421 actgaattta tgtcaatgac aagaggttac ggtattatta accatacatt tgaagaattt
     3481 agaccacgta ttaaagcgca aattggcggt cgtcgtaatg gtgcattaat ttcaatggat
     3541 caaggttctg caagtactta tgccatttta ggacttgaag atagaggtgt aaacttcatg
     3601 gaacctggta ctgaagttta tgaaggtatg attgttggtg aacataatcg tgaaaatgat
     3661 ttaactgtta acatcactaa aacaaaacat caaactaacg tacgttctgc aacgaaagac
     3721 caaacacaaa caatgaatag accgcgtatt ctaacattgg aagaagcgtt acaattcatt
     3781 aatgatgatg aacttgttga ggttacacca gaaagcatac gtttaagaaa gaaaatttta
     3841 aacaaaaatg ttcgtgaaaa agaagcaaag cgtatcaaac aaatgatgca agaaaacgaa
     3901 taatttaaca taataaaaga gaagctgagc gatgaaagtt gcttagcttc tcttttggca
     3961 tataatattt gaaaaagtgt ttaaatgcta tcagttcctg ttactttcac attttcaaat
     4021 ttctaacttg tttattcaga tattaatcga gcggatagtg ttgcgcacgt tgtttagggg
     4081 tgtctaatcg acttttacaa tcatcgcaca taaatgttcg aataggattg tttttaagtc
     4141 gtttagactc agttgtgcgc tcatctataa atacttttgc atcacagata atgcattgca
     4201 cttgtctcaa attaaatcac ctcaatatga gttacatggt tgattcgatt tgaataacca
     4261 tcttcttgat tgtaaataaa actatctaca ccattatcgc tgtaaagtcg tttaccgtct
     4321 tttgcaaatt ggaaaaataa atagggtaat agatctatcg gtatatctaa atgatcatgc
     4381 tcatttgata atcgaatagt agttgcagag tcatgtggtt cggaatgttt gaaaaatggt
     4441 gtcatattaa tgacaaatga accttctaac atggcacgtt ttttgtattt tatttctgaa
     4501 tttaaagtag gcggattagt ttgtccttct aggatagcac gattccattc atgattatct
     4561 tcaaagtcga ttggttttga accatcaaat acaccttttt ctaaatcttc gatgctaact
     4621 tttctatcat cgaaaatcca agtcgtacta tctaatgtta taggaaactt tacggctcct
     4681 ttaatttgta tcattttccc actccctatc aatgtatata gcattatttt aacacaaatt
     4741 gctaacgaca cattttaaat ctacttgctt tttaatattt agtaagataa acttttagta
     4801 agacttgaga atttatatag agggggagcg tgtcatggcg aaacaaacaa caatgaaaaa
     4861 tgcagctttg aaacaattga ctaaagatgc tgatgaaatc ttgcatctga ttaaagttca
     4921 actagataat ttaacattac cttcatgccc attatatgaa gaggtactag atacacaaat
     4981 gtttggactt caaaaagaag ttgattttgc tgttaaatta ggtttagttg accgcgaaga
     5041 tggcaaacaa attatgttac gtcttgagaa agaactttca aaattacatg aagcttttac
     5101 acttgtttaa ggtttaatat ataagcatat taaaacggcg tgagatatcg acaattgagc
     5161 tgcgccgatt ttatatttat agtttaatta ctgattaaag tggctgttat gttgtcttct
     5221 tgatgacatg tcagtcactt ttattgggtt ttagcaattc acgatattaa gtaaacaaat
     5281 attctataaa ttacctcaag atacctgtta atatttgtga ttatgacgat gtcatgtata
     5341 taataagtaa catggatttt taaaattaaa gtataaaacg aaatcatttg aagtataaat
     5401 tgtagaattg gatgactgaa tatatgaaga attttagaag tattttacgg tatattggta
     5461 aaacctcaaa gtttattgat tatccgttat tagttacata tattgtattg agtttaattg
     5521 gattagtgat ggtatatagt gccagtatgg ttccagcaac taaaggtaca ttgactggtg
     5581 gtatcgatgt tccaggaacg tatttttaca accgacaatt agcatatgtc ataatgagtt
     5641 ttataattgt attttttatt gcatttttaa tgaatgttaa attactgagt aatattaaag
     5701 tgcaaaaagg tatgattata actatcgtct cgctattatt actgacgtta gtaatcggta
     5761 aagatattaa tggttctaaa agttggataa acttagggtt tatgaactta caggcatctg
     5821 agttattaaa aattgcaatc atattatata tcccatttat gatcagtaaa aaaatgccta
     5881 gagtattaag taaaccaaaa ttaattttaa gtcctattgt attagcatta ggttgtacgt
     5941 ttttagtttt cttacaaaag gacgtagggc aaacattact aatattaatt attttagttg
     6001 cgattatttt ttattcagga attggggtaa acaaagtcct gagatttggt ataccagcag
     6061 tgctaggatt cttagtagta tttgtcattg cattaatggc tggttggtta ccaagttatt
     6121 taactgccag atttagtacg ctaacagatc cattccaatt cgaatcagga actggatacc
     6181 atatttccaa ttcattgctt gcgataggta acggtggcgt atttggtaaa ggattaggaa
     6241 atagtgcaat gaaattgggc tatttaccag aaccacatac agattttatt tttgcaatta
     6301 tttgcgaaga attaggttta atcggagggt tgctagttat tactttagag ttctttattg
     6361 tatatcgtgc cttccagttt gcaaataaaa catcatcata tttttataaa cttgtgtgtg
     6421 ttgggattgc cacatacttt ggaagccaaa cgtttgtaaa cattggcggt atttcggcaa
     6481 caattccatt aactggtgtg ccattgccat ttatcagctt tggtggatca tcaatgatta
     6541 gtttaagtat tgctatggga ttacttctga ttgtaggtaa acaaatcaaa gtagaccagc
     6601 aacgaaagaa acaacagcaa aaagttgata taagaagaca atttaattaa aaaaatacta
     6661 gccaatattt agtacgagat gacttctgtc attaagcaat gctaaacatt ggctatttat
     6721 atactctttg tcaaattgga ctgatgagtt caataacgga agttaggcaa ccaaacaacg
     6781 cttaacttcc tttttgtttt gttattacga gattactcat gattatcaaa ttttataaac
     6841 aaaacaacgt ataattataa ctaaatttta tgactaaaaa tcactaaatg tggtggcgaa
     6901 attagaatca tgatgataag ataaagttat cgctattgat aataaatgtt gatgttttac
     6961 aattttattt ttaatttttt agagttgtag aaatcgaaaa tgtttcacaa caaaaacgtg
     7021 aactatctgt tgttgcataa tcatttttga aattattatt tttgaagcgg aggttttaat
     7081 tgtctcaaga atgttaaatt ttgaaaattt gaaacataac tatagcaaaa cagagcgctt
     7141 taagataaaa ttttattatc taattagtta gaaaattcta atagtttgag gagtgtatcg
     7201 ctattgaaac aaataaaaaa gttacttgtt gctaaccgtg gagaaattgc aattcgtata
     7261 ttcagagcgg cagcagaatt agacatcagc acagttgcaa tttattcgaa tgaagacaaa
     7321 agttcattac atagatataa agcagatgaa tcctatttag ttggaagtga tttaggtcct
     7381 gctgaaagtt atttaaatat tgagcgtatc attgatgtag caaaacaagc gaatgtggat
     7441 gcgattcatc ctggctatgg atttttaagt gaaaatgaac aatttgcgcg tcgttgtgca
     7501 gaagaaggaa ttaaatttat tggtcctcat ttagaacatt tagatatgtt tggagataaa
     7561 gttaaagctc gtacaacggc tatcaaggca gatttaccag ttattcctgg tacagacggt
     7621 ccaattaaat catatgaatt agcaaaagaa tttgcagaag aagctggttt cccgctaatg
     7681 attaaagcca caagtggtgg cggcggtaaa ggtatgagaa tcgttcgtga agaaagtgaa
     7741 ttagaagatg ctttccatag agcaaaatca gaagcagaaa aatcatttgg taatagtgaa
     7801 gtttacatag aaagatacat tgataatcca aagcatattg aagtacaagt cataggtgac
     7861 gaacatggaa atatcgtaca tctatttgaa cgtgattgtt cagtacaacg tcgtcatcaa
     7921 aaagttgtag aagttgcacc atcagttgga ttatcaccaa cattacgtca acgtatttgt
     7981 gatgctgcaa ttcaattgat ggaaaatatt aaatatgtca atgcaggtac tgttgagttt
     8041 ctagtatctg gtgacgaatt cttctttata gaagttaacc ctcgtgtaca agtagagcat
     8101 acaattacag agatggtaac aggaattgat attgttaaga cacaaatttt agttgcagca
     8161 ggtgccgatt tatttggtga agagattaat atgccgcaac aaaaagatat tacaacattg
     8221 ggctatgcca tccaatgtcg tattacaaca gaagatccgt taaatgattt catgccagat
     8281 actggaacaa tcattgctta tcgttcaagc ggtggctttg gtgtacgtct tgatgctgga
     8341 gatggtttcc aaggtgctga gatatcacct tattatgatt cattactcgt aaaattatct
     8401 acacatgcga tatcatttaa acaagcagaa gaaaaaatgg tacgttcatt acgagaaatg
     8461 cgtattcgtg gtgttaaaac taatattcca ttcttaatta atgtaatgaa gaataaaaag
     8521 ttcacaagtg gtgattacac aactaaattt attgaagaaa caccagaact tttcgacatt
     8581 cagccgtctc tagatagagg tactaaaaca ttagaatata taggtaatgt aacaattaat
     8641 ggtttcccaa atgttgagaa acgtccgaaa ccagactatg aattagcatc aattccaact
     8701 gtatcttcaa gtaaaatcgc ttcatttagt ggtacgaaac aattgcttga tgaagtaggt
     8761 ccaaaaggtg tagctgaatg ggttaaaaag caggatgatg tcttactaac agatacaacc
     8821 tttagagatg cacaccaatc attattagct acacgagtta gaactaagga tatgattaat
     8881 atcgcatcca aaacagcgga cgtatttaaa gatggtttct cactagaaat gtggggcggt
     8941 gctacatttg atgtggcata taatttcttg aaggaaaacc catgggaacg acttgaacgt
     9001 ctacgtaaag ctattccaaa tgtattattc caaatgttgt tacgtgcttc aaacgcagtt
     9061 ggttataaaa actatcctga taatgttatt cataaattcg tacaagaaag tgctaaagca
     9121 ggcatagatg tctttagaat tttcgattca ttaaactggg tagatcaaat gaaagttgcc
     9181 aatgaagcag tacaagaagc gggcaaaatc tcagaaggta ctatttgtta tacaggtgac
     9241 attttaaatc ctgagcgatc aaacatttat actttagagt attatgtcaa actagctaaa
     9301 gagttagaac gtgaaggttt ccatatttta gcgattaaag atatggcagg cttattaaaa
     9361 cctaaagctg cttacgaatt gattggtgag ttaaaagcag ctgtagattt accaatccat
     9421 cttcacactc atgatacaag tggtaatggt ttattaacgt acaaacaagc aatagatgct
     9481 ggtgtcgata tcattgatac tgctgttgct tcaatgagtg gtttaacaag tcagccaagc
     9541 gccaattcgt tatattatgc attaaatggc ttcccacgtc accttagaac tgatattgaa
     9601 ggtatggagt cacttagtca ttattggtca actgtacgta cttattattc agactttgaa
     9661 agtgatatca aatcaccgaa tactgaaatt tatcaacatg aaatgcctgg tggacagtat
     9721 tcgaatttaa gtcaacaagc taaaagttta ggtttaggcg aaagatttga tgacgtcaaa
     9781 gatatgtatc gcagagtgaa cttcttattt ggtgatatcg taaaagtaac gccatcgtct
     9841 aaagtagttg gtgatatggc actttatatg gtacaaaatg atcttgatga acaatccgtg
     9901 attacagatg gctataaatt agatttccca gaatcagtag tgtcgttctt caaaggtgaa
     9961 ataggacaac ctgtaaatgg ttttaatgaa gatttacaag cggttatttt aaaaggccaa
    10021 gaagcattaa cagctcgtcc aggtgaatat ttagagccag ttgattttga aaaagtccgt
    10081 gagttgcttg aagaagagca acaaggtcct gttacggagc aagatattat tagttatgta
    10141 ttatatccaa aagtatatga acaatatatt caaactagaa atcaatatgg aaacttatcg
    10201 ttacttgata cgcctacatt cttctttgga atgcgtaatg gtgaaacagt agaaatcgaa
    10261 atcgataaag gtaaacgatt aattattaaa ctagaaacga ttagtgaacc agatgaaaat
    10321 ggtaatagaa cgatttacta tgcgatgaat ggtcaagcga gacgtattta tattaaagat
    10381 gaaaatgtgc atacaaacgc gaacgttaag ccaaaagcag ataaaagtaa tccaagtcat
    10441 atcggtgcgc aaatgccagg ttcagtaact gaagtcaagg ttagtgtagg tgaaacagtg
    10501 aaagctaatc agccgttgct aattactgaa gctatgaaaa tggaaacaac aattcaagca
    10561 ccatttgacg gtgtgattaa acaagtaact gtaaataatg gtgacacaat agcgacaggc
    10621 gatttattga tcgaaattga aaaagcaact gactagaatg attaaaataa aacgagatta
    10681 cacaacaatt gacgtgtaat ctcgttttta cttgtcttag gcttaggttt gcttttttgt
    10741 tattgcttgt cacttcttac tgatcgtaac attagcatga taaagtatgt tgtcatacca
    10801 aataaataag tgataaataa tgcatggaat agtgcgatta tcaagttaac atttgtcata
    10861 atagacaatg cacctgtgat aacttgtaat ataacaagta taaatgcagc tgtataacca
    10921 taatgaacag tacggttatt tggataattt ttaatagcgt gaatataagt aatcataata
    10981 atcgtaaaca ctataaaagc catgatacga tgcgtgagtt gaacccaatc ttgttctgaa
    11041 tgtggtacaa gatcgtggaa tggcaatggc caaccaccat atgctaaact tgcatccgca
    11101 tgtctcacta gtgcaccagt gtaaacacca caataaatga tgattgccat taaccatgtt
    11161 aaacgtctta atggcttttt gatatataat tcgtcagctt catatttttg atctatagag
    11221 aaaataatta atgttattaa aaatacagat gagaaactga ttaatgatat accaaagtgc
    11281 aatgctaaaa cgtaatcgtt ttgttgccaa ataacagcag cagctccgat taatgcttgc
    11341 aataataaga atccaacact aatgattgat aaaggtttaa tttctttaat atagcctata
    11401 tgtttccatg cagtgataac taaccataag accattaata aagacaaagc tgaaacggct
    11461 ctatgactta actcaataat cgtatcaata ggaaagaatt ctggaatcaa cgcaccatga
    11521 catagtggcc aagaagaacc acaaccatca gctgatccgg ttttggtaac taaggcacca
    11581 ccaagttgta caaatgtcat cattaacgtt gctacgacac ctaaccattt taaattcttt
    11641 ttgccaaaca atttatacac cccatcataa aaaaacgcat cactgagaat tagaattaat
    11701 agccggattt gagatgatac tataaattga cctgattgta ggatatgaaa agatgggatc
    11761 caacgcagga aatatgattt aattttacaa gtattgtaag tggacgacat aaaaagaact
    11821 taatcgtaat gattttttta ttgggataat tatgtaatcc acgtttactc aaatttgaag
    11881 cttaaatatt aatctctttt agatgcatga ttctacttat taaaattttc taacatatac
    11941 attatagcaa taaattaaat gttatttgtg tcacaaaatt gacattttct cttgtcgtta
    12001 atttgtcaca atttaatttt attaaaccta gtctttttat gcaatctaag atatcataat
    12061 cttatatgaa caaatttaag gagggggatt atgagcaaag agcatacttt gtcacaaaat
    12121 attagcagag ttaacttcaa agaattgcaa cagataatta aaatgggact tgttcaaggt
    12181 aacttaattc cggcttttgc gggcgcatgg ctagcagttg taatgacaaa tcattccttc
    12241 ttatcatcaa tacctcaaat tttattaatg ctattaggat ctactttaat tatgggtggc
    12301 gcatgtgcgt taaataatta ttacgaccaa gatattgatc gtattatgcc tagtaaacaa
    12361 aatagaccaa ctgtaaataa tagaattaca gatcaaaatt tattactatt aagttttggt
    12421 atgatgttag ttggagaaat ttgtttgttt ttattgaata taccatcagg cgtacttggt
    12481 cttatgggga ttgtaggtta tgtgtcttat tactcaatat ggtctaaaag acatacaaca
    12541 tggaacacag tgattgggag ttttcctgga gcagtaccac cactaattgg atgggttgca
    12601 attgaaggcc aaattagttt aacagcgatt gcgctgtttt tagttgtatt ttgttggcaa
    12661 ccaattcatt tttatgcctt agctattaaa cgtaaagatg aatatgcact tgcaaatatt
    12721 ccaatgttac catcagttaa gggctttaaa cgtacacgtg tcagtatgtt tgtctggttg
    12781 attattttat tgccagtacc tttattacta ataaatttag gtatcgtatt cgtagtgtta
    12841 gctacattat taaatttagg atggattgca ttaggtttaa caacatttaa gaaaaattca
    12901 gatcaaacaa aatgggcaac acaaatgttt atatattcac taaattattt agtgatcttt
    12961 ttcgtgttag ctgtgattgt ttcattactt actttgatct agattaatta agttaggatg
    13021 aaaaatatgg gcgttccaat tttaccaacg attagtacga catttattgt cataagtgca
    13081 attttaattg ccattggttg gagacttatt tggaaaaggg aaataaataa gcacaaaaat
    13141 gttatgttag ctgcagctat ttttgcttta acttttttct taatctatgc aagtagaacg
    13201 atttttatcg gtaatacagc atttggcgga ccagcatcaa ttaagaaata ttatacgatt
    13261 ttcttatttt tccacattaa tttagcaaca attggtggta ttctaggtct agttcaaatt
    13321 attacagcat ttaaagataa atataatgta caccgcaaat ttgggccatt cgcttcagtt
    13381 atatggttct gtactgcaat tacaggtgta gcagtttact tattattata tgtattatat
    13441 ccaggtggag aaacgacatc actgattaaa gcaacatttg gtcattaata cgcttataca
    13501 aatgatacta atctgataag gcaatttgtt ttatcaggtt ttttgttgaa gaatagtcgg
    13561 acagttgatg gtattcattt gataccttaa ctgtccattt ttttatacat attttaatcc
    13621 taataatgaa attcaacctg aaaacataaa gataggttat gatatagagt gtagggaaaa
    13681 tctttatgat gttaacatta tgcctgaaga tgattttgtt tcatcgaaat gacacagtca
    13741 gtgttgaaaa cttgctaatt aatgtgttgt tttttacaat agtattaata ctttttaggt
    13801 ggttgattga tgaaaaagtt aattataaga gtcgtcggtg tattattttt agttggattt
    13861 ttaatatatc ttttttattc accgagatta aaatttgatg tattagagaa cccgaataaa
    13921 ggtaataaag taaatagatc tgaacaggtg aataaatcaa ataaccatgc tgaaaatcca
    13981 aagcctaaag aaggtgttgg tacatgggta ggtaaagata ttaaagtgct tacttctaaa
    14041 tttggacaag cagatcgtgt ctaccctttt agagatggtt acaaaaatta tgtatttaaa
    14101 gacaaaaaca gttattacat tgtttcaact aaacgtgaag aaatcgtttc agtgtatgct
    14161 acaggtgaaa aagtaaatgt tagtccgtta aaaataggac aacattctgc agaaattttt
    14221 aatcatacaa gtattaatcc agaaccgtcc tttaaagtag atggtaaaaa atatgaattt
    14281 gaactttcag atgaagattt aaaaacacaa acactgatta aatatggcaa catatatgca
    14341 caagtgtatt ctgatcaaca atcgaaaaag gtgctaagtg tacgattttt aacaaaagaa
    14401 atgttagcag atattgaacc ttatcaatta aattctaatt ctacgtcaga agagcataat
    14461 aagcgtccag ctgagcaaaa tccaaatcaa ttaatttctc tttatgaagt aacgaatgaa
    14521 atgagaaaat taaaaggatt aaaaccattg aaaatcaata gcgatttagc acatattgca
    14581 tctaataact tatatgaagc gacctctaat ggttctgata gtgttgaatt tacagaggac
    14641 gcattaagag ggcaattaga taaaaatcac gttacttata aaacaactgc tcaaaatgtt
    14701 ggttatgcgt ttaatgatgt accaacatta atccatagtt ggatgaattc agatatacat
    14761 cgatctcgtc tattaaattc aaaatacgat gagatgggtg gagatgtaat gagagattat
    14821 tattcactaa ttttcttaga aaaataacaa tgaggggtat ttatgattaa tgaagcttca
    14881 ctagcgatat tagatgatat tgatgaacta gctgatatga tagttgcatc agatatttat
    14941 gcatcatttg agcaagctaa acaggcgctc gaaaacaatg acgaagcaca tttactttat
    15001 caatcatttt taaaatcaaa agagaaatat gatgaagtaa tgcgtttcgg gaaatatcat
    15061 cctgattata agaaagtcat gttagagaca agacaacgca aaagagcata tgagatgctt
    15121 gacgttgtga tgcattacaa agctagggaa atggcacttc aacatttaat tgatgaagtt
    15181 gttacgaaaa ttgcgtacgc tgtttcagaa catgtcaaaa tagaaacagg taatccattc
    15241 tttcaaacat cacatagtgg ttgtgcgacg ggcggatcct gtaattgttc attataaaaa
    15301 acatcgagtc agaaaaagat ggttattgaa accattaact agcatctgac tcgatgtttt
    15361 tgtttattgt tttttgttta ttgttttttg tttattgttt gtttgaattg ttgtgctaaa
    15421 tctggtcgat ctgtcacaat cgtgtgtgca cctttttggt ataaatcatt catcagatct
    15481 atactattta cgccataata gcctggaatg acattcatat catttaacca tttgataaaa
    15541 cgagatgaag tcaaatcaat gcctttaaaa tgagtaggca tttggaacgt ttgtgctaat
    15601 ggttggtagt acctaccacc taataaatga tattttaaaa atgcctctgt aacttcctgt
    15661 tggctagcac caattgcaac agatccttgt gcaattttat taaaacgtac gatttgttct
    15721 ttataaaaac ttgtcacaag aacacggtca aatgcttgat tttctgcaat tgtatcaaac
    15781 ataatttgtg gtgcgattga gccttcatag gattcaggag catcttttaa gtctacgttt
    15841 atatacatat caggatattg cttcagcaac tcatcgaagg ttagtatagc tgtgtgtgca
    15901 tgaccacgat atggtgttag tccatttata tctttgaagt gataagctgc gtctaatttc
    15961 tttaattctg ctaatgtatg ggcactaact tttccagagc cgttcgtcgt tctatcgaca
    16021 gttgcgtcat gaaaaacgat aagctgttga tcttttgtga gtctcacatc tgtttcaaag
    16081 ccatcaacgc ctaattgttt agcatagtca aatgcaagtt gcgtttgctc tggtcttaaa
    16141 gccataccac cgcgatgcgc aaatatatat ggtgcattgc ctttgaaaaa agcagggatg
    16201 gtttgttttt tagtaatcac tttattttta tttatcataa acaaactact tacaaatcca
    16261 gcaccgacta gtaccgcatt taaaatgttt ctgtttactt ttttcataaa aaattcctcc
    16321 tcgtttactt ttatagctta acaaattcat agttctgact acagcgaaat gtgtggttaa
    16381 tcatatagtg atgcttttga gaattgaatt aatataatga tgtttaatat aatctaaata
    16441 catttatcga gcaattacat aagacataat taaggtagct taatatttta aaattaataa
    16501 agacatgata tgattaatgc tgaaaataaa tggagtgagg tttaaatgaa tttaatccca
    16561 agaactagta ttgtagttta tttaaaacat atgaaacatg aacgacaaat ccgaaaatat
    16621 ggacatatcg ttcattcaaa tagagatcgt aaatttgtaa ttatgtatgt gaatgagcaa
    16681 gatgttgatc aaattgtaca taaactaatg caacttaaat acgttagaca cattgatggc
    16741 tcaccatata aatacttaaa gaaaacttac gaaaaagaga aacacgaaat atataattaa
    16801 tattattgaa gttctggtat ccatttttgg agccttaaca cactaattaa ataattataa
    16861 tataacgata aatcatgaaa tgcttgaggg ggctgtacat cgatacctaa aattggtatg
    16921 tcgaattttt cagcacaatc attaatcatt tgaaactttt tatttgaatc tggatatgga
    16981 tatttaatag cgttaatcat gatataaaat gcttggaaat gattgccagt tgtagggttc
    17041 ataatgattg ctacagatga ctttttattt tcagcttgtg gtgaatgaaa atagataatt
    17101 ttatcaatac gttgatggtt atattcaatc atcgtcatga attcgaacaa atctgttaga
    17161 ccttcaccaa gtgtaataaa tgtttgtttc attggtttat cattctcctt tttctcaata
    17221 aattatatta aataactaaa tgaattggaa gtgtgaacaa catgcgcgtc attgcaggta
    17281 aacataaaag taaagcttta gaaagtatgg aaggccgtaa tacgagacca actatggata
    17341 aagttaaaga aggtatcttt aatagtttat atgatgtgtc aggtataggt ttagatttat
    17401 ttgcaggaag cggggcgctt ggaatagaag cactctctcg aggtatggat aaggttatct
    17461 ttgttgatca aaattttaaa gctgtaaaag ttattaaatc aaatctttcg aatttggatt
    17521 tagaggcaca atctgaagtt tataaaaata atgcagatag agctttaaaa gcattgtcaa
    17581 aacgtgatat tcaatttgat gtcattttct tagatccacc ttataataaa ggtctcattg
    17641 ataaagcttt aaaactaatt tcagagttta atttattgaa agaaaatggt atcatcgttt
    17701 gtgaatttag caatcatgaa gaaatagact atcaaccgtt taatatgatt aaacgttacc
    17761 attatgggtt gacagacaca ttgttattag aaaagggaga atagcatgga acatacaata
    17821 gcggtcattc cgggtagttt tgaccccatt acttatggtc atttagacat tattgagaga
    17881 agtacagata gatttgatga aattcatgtc tgtgttctta aaaatagtaa aaaagaaggt
    17941 acgtttagtt tagaagagcg tatggattta attgaacaat ctgttaaaca tttacctaat
    18001 gtcaaggttc atcaatttag tggtttacta gtcgattatt gtgaacaagt aggagctaaa
    18061 acaatcatac gtggtttaag agcagtcagt gattttgaat atgaattacg cttaacttca
    18121 atgaataaaa agttgaacaa tgaaattgaa acgttatata tgatgtctag tactaattat
    18181 tcatttataa gttcaagtat tgttaaagaa gttgcagctt atcgagcaga tatttctgaa
    18241 ttcgttccac cttatgttga aaaggcattg aagaagaaat ttaagtaata aaaataacag
    18301 tattttaggt ttatcatggt ttacaatcct aaaatactgt tttcatttgt taacgatatt
    18361 gctgtatgac aggcgtgttg aaatctgttt gttgttgccc gcttattgca ttgtatatgt
    18421 gtgttgcttt gatttcattt gtgaagtaat gtgcattgct tttgttaata ttggttatat
    18481 attgtctttc tgggaacgct gtttttaaat gctttaaata ttgtctgcca cggtcgttca
    18541 tcgctaatac tttaactgcg tgaatgtttc tcgtaacatc tgtaggttta atgtttaata
    18601 atacattcat taacagtctt tggatatgcg tatatgtata acgctttgtt tttagtgatt
    18661 ttacaaaatg atgaaaatca gttgcttcat taatgttaga ttttaaacga ttttcaaaac
    18721 cttcagtaac agtataaata ttctttaatg actctgtagt catagcaatg atttgatatt
    18781 tcaaatatgg aaatatttga tttaatgtta tatgaggtgt tacgtacagg tgttgaatat
    18841 ctttaggtac cacatgatgc caatgatcat cttgactaat gattgatgtt ctaatagatg
    18901 taccacttgc aaactgatgg tgttgaatta atgaatcatg atgttgagca ttttctcgtt
    18961 taatagaaat tgcattgatg tttttagcat gtttagcaat tgctttcaga taactaatac
    19021 caagtatgtt gttaggactt gctagtgctt catgatgctc taataattcg ctaatgatac
    19081 gagggtagct tttaccttct tttacttttt gtgaaaagga ttcggattgt tcaatttcat
    19141 taatgctgtg agctaattgc tttaatgttt tgatatcatt attttcacta ccaaatgcaa
    19201 ttgtatcgac actcatataa tctgcgactt taactgctag ttcggcaaaa tgatcgccag
    19261 atgataaact ggcagttgct ggtagttcga taactaaatc agctgttgat aatgccattt
    19321 ttgcacgagt aaacttatta tagattgctg gttcgccacg catgacaaag ttaccactca
    19381 ttattgcaat agtaatgtca gcatttgtaa gttttttaga ttgattaata tgatattgat
    19441 gcccattatg aaagggatta tattctgtga ttaagccaac gcttttcatt tgcaattcgt
    19501 cctttcggta ttcattatta atattgtaac agaacatgat atgttaagaa aaaatcttga
    19561 caacttgttc ttagaaagtt aaaataaatt ttgtgcttgt tagaggtgaa gccatatgaa
    19621 atggtcaatt acgcaattaa ggaaatatca aggtaagcca tttgaatttg atcaaacggt
    19681 gagttttgac aatttaaaag aatcattaga tttaattgat ttatctccaa ttacaatcca
    19741 aggtcagtta accattaagt caacagaagt cgttgcggat attcacatta ctggtacgta
    19801 tacaatgcct tgtgcacgta ctcttgtacc agttaaagtc ccactagatg taactactac
    19861 agaagtattt gatttagaag ggtacaatca gtataacgat gatcaagatg atgtagatga
    19921 acactatcac attattaaag atggtatggt taatcttcat gatattgtcg aggatatagt
    19981 tattattgag aaaccaatga gagcttattc agagcaaagt gaccaaatgt tgacagtagg
    20041 taatggttgg gaagtaatcg atgaggatca attagatgag cttgctaaac agcaagaaca
    20101 agatgattca gaatcacgac aagttgatcc aaggcttcaa aaattacaac aattatatga
    20161 taaagagcaa taagtagttt aattaatgat ataatgttgt taattaaact aacatttagt
    20221 atttttcgtt tataatctaa ggaggatata tcatggcagt accaaaaaga agaacttcta
    20281 aaactagaaa aaacaaacgt cgtacgcatt tcaaaatttc agtaccaggt atgactgaat
    20341 gcccaaactg tggcgaatac aaattatcac accgtgtatg taaaaactgt ggttcttaca
    20401 atggcgaaga agtagcagct aaataatttt agttactcaa tataaaaagt cccgcttaaa
    20461 atgattgttt taagtgggac tttttatatt gcaaaaaata attggcggac gaggtaacag
    20521 gctacctcat ccaccaatta aaatttgtta atttaataat taaatataaa gacgattaat
    20581 tagtttttac gttttctagg taatacgaat gcaacgatgc tacttaaagc taataatacc
    20641 attaatggta atgtcatatc tttatttgat tcttcaccag tttgtggtaa tgattttgct
    20701 ttattttctt gtgtattttt attgttttgg ctttgagtgt gtccatcatt tgtgttttta
    20761 atgtttgctt tttgtaatgg agcactatct tttgcttcgc tagaacctgc tgaagtttga
    20821 acaacatctt ttgttgtttc tgatgaagca gttgttggtt ttgcaacatt ttgagtcgta
    20881 gatactacct tggttggagt tgtactactt gattctactt cagctttagc tggttttgta
    20941 gcaggcgttt tgtctttacc tgactcacta gatgagtcat tttctttttc aacacttggt
    21001 gattgtgtat tgtcatcttt ttggctgtct tgtttttgtg attctttttc aacaggtgat
    21061 ggtgttggtt tgctaggctt agctggagta gtttccttct tagctgagtt atcttgttgt
    21121 tcttttttgt tagatttatc ggcattggct tttgtaaatg cttctttatc aacgattctt
    21181 acatggtatt gtccatcata atcaatagtt tttacatgaa ctttaacgat tgcatcatat
    21241 agagttttac cttcaacata tgggaaaata atcgttctag tgttattttt agcatctttg
    21301 ctaattgttc taacacgttg accttcaacc atgaaatctt tccagtaatc gtcattagta
    21361 gtttccatta ccatatattt tttgccgtta agcatacctg ttttaatagg gtgtttaaca
    21421 aaagtatcca tcatagattc gttattctca acactttcat aaacaacata ttttgtatct
    21481 tgtaaatcag tcattttttc atttgttggt tgtacatttt ggaattcagt tattgcggat
    21541 ttcacttgtt catctaaagc ttttttcgtc tcttctaatt tcttcttgta ttcagctttc
    21601 aatttttcag gaagtttatc ttgaatttta tttaattcat aaacttgtct ttctagtgtt
    21661 ttcgcttttt tatatggcgc taataatttt tcagctttat aatcttcttc agttttgaat
    21721 ttatctgcac tgttataaat tggttgtgcg aattccatta atgtgtaatc gtatttttct
    21781 tctttgttat tgaagtgagt tgaacttaca attttaacgg cttttgttcc atttgaaaca
    21841 gagaagcgaa tgtaagcata atctttaaca gtatcgtatg atactaattt aattggtaac
    21901 tttttgtcac cttcataaac ttcaaatttt ctccaaaatt gacctgattg taaacctaat
    21961 tctatttctg gttttgaatc agtgaaaata actctagctg gtttaacaga gcttgcataa
    22021 tgataaaatt gttgctcacc gttttctttt ttcatttcaa aatcaattgg acgagagttt
    22081 ggtgcgctat gatctttatc ttttattgca gggtttttaa tcgcttctct tagttcctga
    22141 ttcaaaatag gatatgtatt gttatcggct tttgctgctg gtttaacttc ttttgtttcc
    22201 ttaggggctt taacttcttt agcttctttt gtttcagaag taggggcctc aacttcttta
    22261 ttagatactg agacagcatt ggctactggt ttagcttctg gagctttttc agttgttgtt
    22321 gatggacttg caactgcttc agtttttggt tgtgcttctg tatttgtacc acctgtttct
    22381 tcagctgctt gtgcttcgcc atttgacatt aataataaaa gtgtactaat cgctacagat
    22441 gcaacgccta ttgatgactt tctaattgaa taaaatgatt taaattcttt ttgctgtttg
    22501 ttcatgttgt agaaacaact cctaattgta tattatcaac tgataatcat tatcaattga
    22561 ttacttgtat tgtacattga aatggtagtt aattgcaacg ttattttata aaaaaaacct
    22621 atgttataga atatggaata tctatgacat aggttaaata aaatttaaaa taaaaaatat
    22681 attaagttat gagtgtgacg atgatttatt tagattcttt tcttttgaaa agtaacaaag
    22741 ataatgaacc taaaagggca agtgttgcga aggcaactgt gctaataaag ttatcaactg
    22801 aagttaaacc agttttaggt aattctttag ctttagaatc ttttgaaggt ccttgtttat
    22861 gaacttcgtt ttgttttgta actttgttag tttgttgtga tttattgtca cttacagctt
    22921 gattgttgct ttcagatttc gctgttgcaa catctttaac aggtgtttga actttatttt
    22981 gttcttgagc tgtttgtgct gttttaactg tatgagcagt ttgtgtttta gtttgatctt
    23041 ttgttgtatc agtacttaca actttagtag agtgattgtc ttcaactttg cttgttgtag
    23101 ttacagtagg tttaactttt tcaactttag gttgaactgg tttagtttgc tcagtaggtg
    23161 ttttaggttg agcaggtttt ggttgaaccg gtttaacatt gtttggtttt gctgcgtcag
    23221 ctaatgtagg aattgctttt tcaaattcta aatgcgtagt atatctatga ttgtaattaa
    23281 tttgtggcac gacaatatgt actttagtag ttaaactctt atacccaggt tcaacagcaa
    23341 cattgattgt tctagtgtca gcttttttat catcgttaac aacagttgtt gctaattctt
    23401 gattgtttgc attgtaaaat ttgtattctt tccagaatga tgcgttgttt aatacagctt
    23461 ggaaataata tttattattt tgtttaatta ctttaccagg gtgttgcata tagtcatcca
    23521 tgtgtgactt ctctgaagag ccatcttttt gcacttggaa attaattggt tgtgatgttg
    23581 cttgagaaac ttgtgcgttt tgattattag ttgcgttcgt agcttctgtt gccgcattta
    23641 cttgttggct gtctgcgcct atgtatacaa gggaacctaa aatgatagat gctgtaccca
    23701 ttgtaatctt tttcatagct gatgaacgtt gttctgattg atacttactg tttaaataat
    23761 gttttgtcat gttgttttcc tcctaaggat acaaattatg tgttgttata tgagatgatt
    23821 aaccattgca attgataatg gttatcaatt atactagcac atctattttc gtataacaat
    23881 aataaattga ttataaaata aatattgaca atgataatca ttattattta tgatttcagt
    23941 aaagacttaa aagcaatcat aaaaaggagg attatgtttt gaaaaatatt ttaaaagttt
    24001 ttaatacaac gattttagca ttaattatca tcatcacgac attcagtaat tctgcaaatg
    24061 ccgcggatag cggcactttg aattatgagg tttacaaata caataccaat gacacgtcga
    24121 ttgctaatga ctattttaat aaaccggcaa agtacattaa gaaaaatggt aaattgtatg
    24181 ttcaaataac tgtaaaccac agtcattgga ttacaggaat gagtatagaa gggcataaag
    24241 aaaaaattat tagtaaaaat actgccaaag atgaacgaac ttctgaattt gaagtaagta
    24301 agttgaacgg taaaatagat ggaaaaattg acgtttatat cgatgaaaaa gtaaatggta
    24361 agccattcaa atatgaccat cattacaata ttacatataa atttaatgga ccaactgatg
    24421 tagcaggtgc taatgcacca ggtaaagatg ataaaaattc tgcttcaggt agtgacaaag
    24481 gatctgatgg agcgactact ggtcaaagtg aatctaacag ttcgaataaa gacaaagtag
    24541 aaaatccaca aacaaatgct ggtacacctg catatatata tgcaatacca gttgcatcct
    24601 tagcattatt aatcgcaatc acattgtttg ttagaaaaaa atctaaaggc aatgtggaat
    24661 aatgagaaat gttaaacaaa ttgctacaaa atctattata gctattatta gcttaggtat
    24721 acttacatat acaacaatga ttggtagcgt gttggctgat gagataaaat atccatcagc
    24781 caaatttaat caacctgaag caaaagataa aacagaatta acttcatcaa tttttaatga
    24841 aaagataaaa gagaataaag cgttagagtt actaattttt aatcaagaaa ataaaaatgt
    24901 aactgaggaa caacaactag ttgatgaaaa ggcgcaattg atttcagata tgactggtaa
    24961 aatttactta caagtaaagc taaaaggtca aattgataaa gaacaacttg tttttcaaaa
    25021 tgacaaaaat gaagaatttc ctttttttat aaaagatgaa aaggatgaca caatagtaag
    25081 aattttaatt gaacagcata tggataaaat caatatgcat gttaaaacgt tggctgaaaa
    25141 gaaagatcta gataacaaag aaatggtgta ttctattcat tttaaagaga aaaaagtaca
    25201 acatgatgat gcaaaagaag tgccttcaaa acatcaaaat caagaaaata atcaagatca
    25261 gcttaaaaaa gatattgatg acaaaaaaga tagtcaaaaa tcagacatta aggaaagacg
    25321 tactagcctt tttactgaaa aaggattaaa tgatattcct gtacaaaaag ataaagtgca
    25381 acaagacagt aataaaaaga ttgaaaatga gcgacctaaa gcatcaggta cattaaaagt
    25441 tgaaaatagc cctccaacag taaaaaaggt tgaaaataat cacaaagagc aaccgaaaca
    25501 taaagatgaa aaatcaaaaa aggaaaagaa aaaagtagtt gaaaaagaaa aagcgttacc
    25561 agcttttaat agagatgatg atagcaagaa tagtagtcaa ttatctagtg atattaaaga
    25621 acttgatgaa ccaaatcata aaaagcaata tatgttattt gcagctggca ttgtgttagc
    25681 aaccatttta cttatttcgg cacatttata cagcagaaag agaggtaacc aagtttgaga
    25741 atcataaagt atttaaccat tttagtgata agcgtcgtta tcttaaccag ctgtcaatct
    25801 tccagttctc aagaatcaac taaatccggc gaattcagaa tcgtaccaac aactgttgca
    25861 ttgacaatga cattggacaa attggattta ccaattgtcg gcaaacccac gtcatataag
    25921 acattgccta atcgttataa agatgtaccg gaaattggtc aaccaatgga gccgaatgtt
    25981 gaagctgtta aaaagttaaa accaacacat gttttgagtg tgtcaacgat taaagatgaa
    26041 atgcaaccat tttacaaaca attaaatatg aaaggctact tttatgattt tgatagttta
    26101 aaagggatgc aaaagtcgat tacacaatta ggtgatcaat ttaatcgtaa agcacaagca
    26161 aaagaattaa atgaccattt aaattctgta aagcaaaaaa ttgaaaataa agcagctaaa
    26221 caaaagaaac atcccaaagt attaatatta atgggtgtac ctggtagcta tttagtagca
    26281 actgataaat catatattgg tgatttagtt aaaatagcag gtggagaaaa tgttattaaa
    26341 gtgaaagatc gtcaatatat ttcgtctaat actgaaaatt tattgaatat caatccagat
    26401 attattttaa gattaccaca cggaatgcct gaagaagtta agaaaatgtt tcaaaaagaa
    26461 tttaaacaaa atgatatttg gaaacatttt aaagctgtga aaaataatca tgtttatgac
    26521 ttagaggaag tgccattcgg tattacagca aatgttgatg ctgataaggc aatgactcaa
    26581 ttgtatgatt tattttataa ggataaaaaa tagcgagttg atatgatgat aaaaaataaa
    26641 aagagactac tatttttatg tttgttagtc attttaatcg caacggctta tatttcgttt
    26701 gtaaccggta caattaaatt gtcatttaat gacctaatta caaaatttac aactggtagc
    26761 aatgaagcag tggattcaat cattgatttg cgattgccac gtatattaat tgcattgatg
    26821 gttggcgcaa tgttagcagt ttctggagca ttattacaag cagcactaca aaatcctttg
    26881 gcagaggcga atatcattgg cgtttcatca ggtgcactta taatgagagc actttgtatg
    26941 ttgtttattc cacaattgta cttttactta ccattattaa gttttattgg aggtttaata
    27001 ccatttttaa taattatatt gttgcattct aaatttagat tcaatgctgt aagtatgata
    27061 ttagtaggcg ttgcgttatt cgtattatta aatggtgttt tagaaatttt aactcaaaac
    27121 cctttaatga aaattcctca aggcttaaca atgaaaatat ggagcgacgt atacatatta
    27181 gcagtatcag cattattggg attaatatta acattactat tgtcccctaa attgaattta
    27241 ctaaatttag atgacgtaca agcgcgaagt atcggtttta atattgatcg ttacagatgg
    27301 ttaactggtt tattagcagt atttttagca agtgcaactg ttgcgattgt tggacaacta
    27361 gcctttttag gtattattgt gccacatgtg gttagaaagc tagttggggg caattacaga
    27421 gtacttattc cgttttctac agttattggt gcatggctat tgttagtggc tgatttatta
    27481 ggacgagtga tacagcctcc tttagaaatt ccagccaatg ctattttgat gattgtcggt
    27541 ggtccaatgc taatttactt aatttgtcaa agtcaacgaa atcgaatcta aaacggtaca
    27601 acaactggtt tagtgatgac tgaagaaacg tcgttaataa aagaggattt ttatgagaat
    27661 gaagcgattt ttaacta
//
LOCUS       DALMNS010000027        26641 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.027, whole genome shotgun sequence.
ACCESSION   DALMNS010000027 DALMNS010000000
VERSION     DALMNS010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 26641)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26641)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26641
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.027"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..1131
                     /gene="proS"
                     /locus_tag="O6Y56_000957"
     CDS             <1..1131
                     /gene="proS"
                     /locus_tag="O6Y56_000957"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDB5574236.1"
                     /translation="ARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEK
                     AEVVYEPNHKHTTVQSLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVL
                     VRGHHEINDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQD
                     LNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGVAHFAEGIEVGQ
                     VFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSV
                     TPFDLHLISINPKKDDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLR
                     IVVGKRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNLK"
     gene            1395..5705
                     /locus_tag="O6Y56_000958"
     CDS             1395..5705
                     /locus_tag="O6Y56_000958"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PolC-type DNA polymerase III"
                     /protein_id="HDB5574237.1"
                     /translation="MTEQQKFKVLADQIKISNQLDAEILNSGELTRIDVSNKNRTWEF
                     HITLPQFLAHEDYLLFIHAIEQEFKDIANVTCRFTVTNGTNQDEHAIKYFGHCIDQTA
                     LSPKVKGQLKQKKLIMSGKVLKVMVSNDIERNHFDKACNGSLIKAFRNCGFDIDKIIF
                     ETNDNDQEQNLASLEAHIQEEDEQSARLATEKLEKMKAEKAKQQDNNESAVDKCQIGK
                     PIQIENIKPIESIIEEEFKVAIEGVIFDINLKELKSGRHIVEIKVTDYTDSLVLKMFT
                     RKNKDDLEHFKALSVGKWVRAQGRIEEDTFIRDLVMMMSDIEEIKKATKKDKAEEKRV
                     EFHLHTAMSQMDGIPNIGAYVKQAADWGHPAIAVTDHNVVQAFPDAHAAAEKHGIKMI
                     YGMEGMLVDDGVPIAYKPQDVVLKDATYVVFDVETTGLSNQYDKIIELAAVKVHNGEI
                     IDKFERFSNPHERLSETIINLTHITDDMLVDAPEIEEVLTEFKEWVGDAIFVAHNASF
                     DMGFIDTGYERLGFGPSTNGVIDTLELSRTINTEYGKHGLNFLAKKYGVELTQHHRAI
                     YDTEATAYIFIKMVQQMKELGVLNHNEINKKLSNEDAYKRARPSHVTLIVQNQQGLKN
                     LFKIVSASLVKYFYRTPRIPRSLLDEYREGLLVGTACDEGELFTAVMQKDQSQVEKIA
                     KYYDFIEIQPPALYQDLIDRELIRDTETLHEIYQRLIHAGDTAGIPVIATGNAHYLFE
                     HDGIARKILIASQPGNPLNRSTLPEAHFRTTDEMLNEFHFLGEEKAHEIVVKNTNELA
                     DRIERVVPIKDELYTPRMEGANEEIRELSYANARKLYGEDLPKIVIDRLEKELKSIIG
                     NGFAVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEITEVNPLPPHYICPNCKT
                     SEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGFKGDKVPDIDLNFSGEY
                     QPNAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGYVKGYLNDQGIHKRGAEIDRLVKGC
                     TGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDQNSAWMTTHFDFHSIHDNVLKLD
                     ILGHDDPTMIRMLQDLSGIDPKTIPVDDKEVMQIFSTPESLGVTEDEILCKTGTFGVP
                     EFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIKTGICDLSSVIGCRD
                     DIMVYLMYAGLKPSMAFKIMESVRKGKGLTEEMIETMKENEVPDWYLDSCLKIKYMFP
                     KAHAAAYVLMAVRIAYFKVHHPLYYYASYFTIRASDFDLITMIKDKTSIRNTVKDMYS
                     RYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKSQAFEFIIEGDTLIPPFISVPG
                     LGENVAKRIVEARDDGPFLSKEDLNKKAGLSQKIIEYLDELGSLPNLPDKAQLSIFDM
                     "
     gene            5995..6462
                     /gene="rimP"
                     /locus_tag="O6Y56_000959"
     CDS             5995..6462
                     /gene="rimP"
                     /locus_tag="O6Y56_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDB5574238.1"
                     /translation="MSKITEQVEVIVKPIMEDLNFELVDVEYVKEGRDHFLRISIDKE
                     GGVDLNDCTLASEKISEAMDANDPIPEMYYLDVASPGAERPIKKEQDFQNAITKPVFV
                     SLYVPIEGEKEWLGILQEVNNETIVVQVKIKARTKDIEIPRDKIAKARHAVMI"
     gene            6483..7658
                     /gene="nusA"
                     /locus_tag="O6Y56_000960"
     CDS             6483..7658
                     /gene="nusA"
                     /locus_tag="O6Y56_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDB5574239.1"
                     /translation="MSSNELLLATEYLEKEKKIPRAVLIDAIEAALITAYKKNYDSAR
                     NVRVELNMDQGTFKVIARKDVVEEVFDDRDEVDLSTALVKNPAYEIGDIYEEDVTPKD
                     FGRVGAQAAKQAVMQRLRDAEREILFEEFIDKEEDILTGIIDRVDHRYVYVNLGRIEA
                     VLSEAERSPNEKYIPNERIKVYVNKVEQTTKGPQIYVSRSHPGLLKRLFEQEVPEIYD
                     GTVIVKSVAREAGDRSKISVFSENNDIDAVGACVGAKGARVEAVVEELGGEKIDIVQW
                     NEDPKVFVKNALSPSQVLEVIVDETNQSTVVVVPDYQLSLAIGKRGQNARLAAKLTGW
                     KIDIKSETDAREAGIYPVVEAEKVTEEDVALEDADTTESTEEVTDVSVETNVEKESE"
     gene            7679..7963
                     /locus_tag="O6Y56_000961"
     CDS             7679..7963
                     /locus_tag="O6Y56_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HDB5574240.1"
                     /translation="MKKKKIPMRKCILSNEMHPKKDMIRVVVNKEGEIFADVTGKKQG
                     RGAYVSKDVAMVEKAQQKEILEKYFKASKEQLDPVYKEIIRLIYREEIPK"
     gene            7960..8277
                     /locus_tag="O6Y56_000962"
     CDS             7960..8277
                     /locus_tag="O6Y56_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxQ family RNA-binding protein"
                     /protein_id="HDB5574241.1"
                     /translation="MSIDQILNFLGLAMRAGKVKTGESVIVNEIKKGNLKLVIVANDA
                     SDNTAKLITDKCKSYKVPFRKFGNRNELGIALGKGERVNVGITDPGFAKKLLSMIDEY
                     HKE"
     gene            8282..10399
                     /gene="infB"
                     /locus_tag="O6Y56_000963"
     CDS             8282..10399
                     /gene="infB"
                     /locus_tag="O6Y56_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDB5574242.1"
                     /translation="MSKQRIYEYAKELNLKSKEIIDELKSMNIEVSNHMQALEDDQIK
                     ALDKKFKKEQKNDNKQSTQNNHQKSNNQNQNKGQQKDNKKNQQQNNKGNKGNKKNNRN
                     NKKNNKNNKPQNQPAAPKEIPSKVTYQEGITVGEFADKLNVESSEIIKKLFLLGIVAN
                     INQSLNQETIELIADDYGVEVEEEVVINEEDLSIYFEDKKDDPEAIERPAVVTIMGHV
                     DHGKTTLLDSIRHTKVTAGEAGGITQHIGAYQIENDGKKITFLDTPGHAAFTTMRARG
                     AQVTDITILVVAADDGVMPQTIEAINHAKEAEVPIIVAVNKIDKPISNPDRVMQELTE
                     YGLIPEDWGGETIFVPLSALSGDGIDDLLEMIGLVAEVQELKANPKNRAVGTVIEAEL
                     DKSRGPSASLLVQNGTLNVGDAIVVGNTYGRIRAMVNDLGQRIKTAGPSTPVEITGIN
                     DVPQAGDRFVVFSDEKQARRIGESRHEASIVQQRQESKNVSLDNLFEQMKQGEMKDLN
                     VIIKGDVQGSVEALAASLMKIDVEGVNVRIIHTAVGAINESDVTLANASNGIIIGFNV
                     RPDSGAKRAAEAENVDMRLHRVIYNVIEEIESAMKGLLDPEFEEQVIGQAEVRQTFKV
                     SKVGTIAGCYVTEGKITRNAGVRIIRDGIVQYEGELDTLKRFKDDAKEVAKGYECGIT
                     IENYNDLKEGDVIEAFEMVEIKR"
     gene            10786..11136
                     /gene="rbfA"
                     /locus_tag="O6Y56_000964"
     CDS             10786..11136
                     /gene="rbfA"
                     /locus_tag="O6Y56_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDB5574243.1"
                     /translation="MSSMRAERVGEQMKKELMDIINNKVKDPRVGFITITDVVLTNDL
                     SQAKVFLTVLGNDKEVENTFKALDKAKGFIKSELGSRMRLRIMPELMYEYDQSIEYGN
                     KIERMIQDLHKQDR"
     gene            11306..12223
                     /gene="truB"
                     /locus_tag="O6Y56_000965"
     CDS             11306..12223
                     /gene="truB"
                     /locus_tag="O6Y56_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDB5574244.1"
                     /translation="MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAG
                     VLPVCIGNATRVSDYVMDMGKAYEATVSIGRSTTTEDQTGDTLEMKGVHSADFNNDDI
                     DRLLENFKGVIEQIPPMYSSVKVNGKKLYEYARNNETVERPKRKVNIKDIGRISELDF
                     KENECHFKIRVICGKGTYIRTLATDIGVKLGFPAHMSKLTRIESGGFVLKDSLTLEQI
                     KELHEQDSLQNKLFPLEYGLKGLPSIKIKDSHIKKRILNGQKFNKNEFDNKIKDQIVF
                     IDDDSEKVLAIYMVHPTKESEIKPKKVFN"
     gene            12238..13209
                     /gene="ribF"
                     /locus_tag="O6Y56_000966"
     CDS             12238..13209
                     /gene="ribF"
                     /locus_tag="O6Y56_000966"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin biosynthesis protein RibF"
                     /protein_id="HDB5574245.1"
                     /translation="MKVIEVTHPIQSKQYITEDVAMAFGFFDGMHKGHDKVFDILNEI
                     AEAHSLKKAVMTFDPHPSVVLNPKRKRTTYLTPLSDKIEKISQHDIDYCIVVNFSSRF
                     ANVSVEDFVENYIIKNNVKEVIAGFDFTFGKFGKGNMTVLQEYDAFNTTIVSKQEIEN
                     EKISTTSIRQDLINGELQKANDALGYIYSIKGTVVQGEKRGRTIGFPTANIQPSDDYL
                     LPRKGVYAVSIEIGTENKLYRGVANIGVKPTFHDPNKAEVVIEVNIFDFEDNIYGERV
                     TVNWHHFLRPEIKFDGIDPLVKQMNDDKSRAKYLLAVDFGDEVAYNI"
     gene            13324..13593
                     /gene="rpsO"
                     /locus_tag="O6Y56_000967"
     CDS             13324..13593
                     /gene="rpsO"
                     /locus_tag="O6Y56_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDB5574246.1"
                     /translation="MAISQERKNEIIKEYRVHETDTGSPEVQIAVLTAEINAVNEHLR
                     THKKDHHSRRGLLKMVGRRRHLLNYLRSKDIQRYRELIKSLGIRR"
     gene            13963..16059
                     /gene="pnp"
                     /locus_tag="O6Y56_000968"
     CDS             13963..16059
                     /gene="pnp"
                     /locus_tag="O6Y56_000968"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDB5574247.1"
                     /translation="MSQEKKVFKTEWAGRSLTIETGQLAKQANGAVLVRYGDTVVLST
                     ATASKEPRDGDFFPLTVNYEEKMYAAGKIPGGFKKREGRPGDDATLTARLIDRPIRPL
                     FPKGYKHDVQIMNMVLSADPDCSPQMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDGK
                     YIINPTVEEKEVSRLDLEVAGHKDAVNMVEAGASEITEQEMLEAIFFGHEEIQRLVDF
                     QQQIVDHIQPVKQEFIPAERDEALVERVKSLTEEKGLKETVLTFDKQQRDENLDNLKE
                     EIVNEFIDEEDPENELLIKEVYAILNELVKEEVRRLIADEKIRPDGRKPDEIRPLDSE
                     VGILPRTHGSGLFTRGQTQALSVLTLGALGDYQLIDGLGPEEEKRFMHHYNFPNFSVG
                     ETGPVRAPGRREIGHGALGERALKYIIPDTADFPYTIRIVSEVLESNGSSSQASICGS
                     TLALMDAGVPIKAPVAGIAMGLVTREDSYTILTDIQGMEDALGDMDFKVAGTKEGITA
                     IQMDIKIDGLTREIIEEALEQARRGRLEIMNHMLQTIDQPRTELSAYAPKVVTMTIKP
                     DKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIFIGAVDQAMINRAREIIEEITREAE
                     VGQTYQATVKRIEKYGAFVGLFPGKDALLHISQISKNRIEKVEDVLKIGDTIEVKITE
                     IDKQGRVNASHRALEE"
     gene            16295..17968
                     /locus_tag="O6Y56_000969"
     CDS             16295..17968
                     /locus_tag="O6Y56_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002455407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HDB5574248.1"
                     /translation="MSLIKKKNKDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMF
                     PEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLT
                     IALIKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGA
                     IVYTGEFKFDQSLHGHYAPDIKRMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHM
                     YDAFAKVRGRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESSFNIARKMGYFD
                     IPKDLLIPITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAI
                     TASANMEVIIANTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKPEYFIPVQ
                     GEFKMQIAHAKLAAEAGVAPEKIFLVEKGDVINYNGKDMILNEKVNSGNILIDGIGIG
                     DVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLREAEE
                     KVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI"
     gene            18225..20594
                     /locus_tag="O6Y56_000970"
     CDS             18225..20594
                     /locus_tag="O6Y56_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HDB5574249.1"
                     /translation="MAQAKKKSTAKKKTTSKKRTNSRKKKNDNPIRYVIAILVIVLMV
                     LGVFQLGIIGRLIDSFFNYLFGYSRYLTYILVLLATGFITYSKRIPKTRRTAGSIVLQ
                     IALLFVSQLVFHFNSGIKAEREPVLSYVYQSYQHSHFPNFGGGVLGFYLLELSVPLIS
                     LFGVCIITILLLCSSVILLTNHQHRDVAKVALENIKAWFGSFNEKMSERNQEKQLKRE
                     EKARLKEEQKARQNEQPQIKDVSDFTEVPQERDIPIYGHTENESKSQSQPSRKKRVFD
                     AENSSNNIVNHHQADQQEQLTEQTHNSVESENTIEEAGEVTNVSYVVPPLTLLNQPAK
                     QKATSKAEVQRKGQVLDNTLKDFGVNAKVTQIKIGPAVTQYEIQPAQGVKVSKIVNLH
                     NDIALALAAKDVRIEAPIPGRSAVGIEVPNEKISLVSLKEVLDEKFPSNNKLEVGLGR
                     DISGDPITVPLNEMPHLLVAGSTGSGKSVCINGIITSILLNAKPHEVKLMLIDPKMVE
                     LNVYNGIPHLLIPVVTNPHKAAQALEKIVAEMERRYDLFQHSSTRNIKGYNELIRKQN
                     QELDEKQPELPYIVVIVDELADLMMVAGKEVENAIQRITQMARAAGIHLIVATQRPSV
                     DVITGIIKNNIPSRIAFAVSSQTDSRTIIGTGGAEKLLGKGDMLYVGNGDSSQTRIQG
                     AFLSDQEVQDVVNYVVEQQQANYVKEMEPDAPVDKSEMKSEDALYDEAYLFVVEQQKA
                     STSLLQRQFRIGYNRASRLMDDLERNQVIGPQKGSKPRQVLIDLNNDEV"
     gene            20599..21312
                     /locus_tag="O6Y56_000971"
     CDS             20599..21312
                     /locus_tag="O6Y56_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDB5574250.1"
                     /translation="MSEMNAVYNVKQYILNLIKQNKLEYGDQLPSNLSIARELNVKTD
                     DVYEAIQALITEQVIKDNFEEGTSVKSLPPFFYPLNELISIGQMIKNAGFECGTEYLN
                     FDEQPATMLDTNLLSVEEGYPVTIIERLRTADGEPVVYCLDKIAKKELTCTEYQMSNG
                     SILSAIKEQSNHNICYADTEIEAVNYEPRISEVLNASPHEGLILLKITHYNESDEPIL
                     YSLNYMKNSLVQFKITRKI"
     gene            21343..22608
                     /locus_tag="O6Y56_000972"
     CDS             21343..22608
                     /locus_tag="O6Y56_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDB5574251.1"
                     /translation="MSRQSQPNIHIKVSPTTKFKTTTIVFKFMAPLEYDTITARSLLS
                     KLLVRATKKWPTDKSFNNHLADLYGAYVNSTISKFKDQHVITFSLEIVNERYLRNGES
                     LFNQGLDLLQEIIWNPLIENKAFNDNFVNQEKTLLAKKIEAMVDNKAQYSFLKLLDHM
                     FENEAYKYLSTGQLEQIPHITAETLYHTYQSMINNDQCSVYVVGNVEPESVEKQILEK
                     FALKPFDKHQFQHSTHHLHDEEVDYIVEYDDVDQAKLNMGYRFPTQYGQSGYAAFVVF
                     NMMFGGDPSSVLFNEVREKQSLAYSIHSQIDGKNGYLFVLSGVSSDKYETAKDTIISE
                     FEKIKAGDFTEEKLELAKKVIISHRYESEDRPKSIIEIMHNQILLEQPQSKETFINDI
                     QKVSREDIVSVAEKAFLDTIYVLTKGGDK"
     gene            22608..23894
                     /locus_tag="O6Y56_000973"
     CDS             22608..23894
                     /locus_tag="O6Y56_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDB5574252.1"
                     /translation="MKERYYELIDERVFEQELENGLRLFVIPKPGFQKTFVTYTTQFG
                     SLDNQFKPLGQDQFVTVPDGVAHFLEHKLFEKEEEDLFTAFAEDNAQANAFTSFDRTS
                     YLFSATDNIENNIKRLLTMVETPYFTKETVDKEKGIIAEEIKMYQEQPGYKLMFNTLR
                     AMYQQHPIRVDIAGSVESIYDITKDDLYLCYETFYHPSNMVLFVVGDVNPEEICRIVK
                     QHEDARNKVNQPKIERGLVDEPEDVKEAFVTESMKIQSPRLMLGFKNKPLQEAPQKYV
                     QRDLEMSLFFELIFGEETDFYQNLLNEGLIDDTFGYQFVLEPTYSFSIVTSATEEPDK
                     LKKLLLDELRDKKGNFQDAEAFELLKKQFIGEFISSLNSPEYIANQYTKLYFEGVSVF
                     DMLDIVENITLDSINETSSLYLNLDQQVDSRLEIKK"
     gene            23894..24598
                     /locus_tag="O6Y56_000974"
     CDS             23894..24598
                     /locus_tag="O6Y56_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDB5574253.1"
                     /translation="MKALVLGGSGSIGSEIVKQLLTDGFEVYVQYYRTDINELTSKFN
                     DDKVHFIQADLSQTIDIDKTFGDIKSLDCLIYASGQSLYGVLQDMKDHDIDACYQLNV
                     LQLIRLCRYFVDVLRQSDNGRIIVISSIWGETGASMETIYSTMKSAQLGFVKALSQEL
                     ALTSVTVNAISPGFVAGNMASEWQEDELQAMITELPQQRLVLPSEVAHTCAYLYHPNA
                     RSVTGTIQKVNGAWYI"
     gene            24703..25530
                     /locus_tag="O6Y56_000975"
     CDS             24703..25530
                     /locus_tag="O6Y56_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfK family protein"
                     /protein_id="HDB5574254.1"
                     /translation="MTVAEKKEWYLEYEIEINRPGLLGDVSSLLGMLGISIVTINGVD
                     QGKRGLLIKTDNLEKVERFEQIARGINEIEITKLKKPELRDRLAVRHGRYIEQDAKDK
                     KTFRFEREDLGLLVDFLAELFKEEGHKLIGIRGMPRVGKTESIVAGSVCAHKRWLFIS
                     STLIKQTVRSSLIKGEYDANHVYIIDGAVTARESNPKHQELVNEVMTLPSIKVVEHPD
                     LFVETSTCTMEDFDYIIELRENENQEIQYEEMKKQTVQSKNNLDFGDPFGGGFGFFE"
     gene            25549..25941
                     /locus_tag="O6Y56_000976"
     CDS             25549..25941
                     /locus_tag="O6Y56_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDB5574255.1"
                     /translation="MKTVGEALKGRRERLGMTLTELEQRTGIKREMLVHIENNEFDQL
                     PNKNYSEGFIRKYASVVNIEPNQLIQAHQDEIPSNQAEWDEVITVFNNNKDLDYKSKS
                     KEPIQLLVIMGITVLITLLLWIMLVLIF"
     gene            25975..26553
                     /gene="pgsA"
                     /locus_tag="O6Y56_000977"
     CDS             25975..26553
                     /gene="pgsA"
                     /locus_tag="O6Y56_000977"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDB5574256.1"
                     /translation="MNIPNQITVFRVVLIPVFILFALVDFGFGNVSFLGGYEIRIELL
                     ISGFIFILASLSDFVDGYLARKWNLVTNMGKFLDPLADKLLVASALIVLVQLGLTNSV
                     VAIIIIAREFAVTGLRLLQIEQGFVSAAGQLGKIKTAVTMVAITWLLLGDPLATLIGL
                     SLGQILLYIGVIFTILSGIEYFYKGRDVFKQK"
BASE COUNT         9762 a         3582 c         5199 g         8098 t
ORIGIN      
        1 gcaagaccag tagttgcaga ttcaggtgct attggcggta gccatacaca tgaatttatg
       61 gcattaagtg ctatcggtga ggatacaatc gtttacagta aagaaagtga ctatgctgct
      121 aatatcgaaa aagcagaagt cgtttacgaa ccaaatcata agcatactac tgtgcaatct
      181 ttagaaaaaa ttgaaacacc aaatgttaag actgcgcaag aattggcaga cttcttaggt
      241 agaccagtag atgaaatcgt taaaacgatg attttcaaag ttgatggcga atatattatg
      301 gttttagtgc gtggacatca tgaaattaat gacattaaat taaaatctta tttcggcaca
      361 gataatattg aattagcaac acaagacgaa attgttaatt tagttggtgc aaatcctggt
      421 tcactaggtc ctgtaattga taaagaaatc aaaatttatg cagataattt tgtgcaagat
      481 ttaaataatt tagttgtcgg ggctaacgaa gatggttatc acttaattaa tgtaaatgta
      541 ggtagagact tcaacgttga tgaatacggc gatttccgtt ttattttaga aggcgaaaag
      601 ttaagtgatg gttcaggcgt tgcacatttt gctgaaggta ttgaagttgg tcaagtattc
      661 aaattgggta ctaagtattc agaatcaatg aatgctacat tcttagataa ccaaggaaaa
      721 gcccaacctt taattatggg ttgttacgga attggaattt ctagaacgct aagtgcgatt
      781 gttgaacaaa atcacgatga taatggaatt gtttggccta aatcagttac tccatttgat
      841 ttacatttaa tttctattaa tcctaagaaa gatgatcaac gagaactagc ggatgcacta
      901 tatgctgaat ttaatactaa atttgatgtg ttgtacgatg atcgtcagga acgtgctggt
      961 gtcaaattta atgatgccga tttaattggt ttaccactgc gaattgttgt tggtaaacgt
     1021 gcatcggaag gtattgtaga agttaaagaa cgtttaacag gtgatagcga agaagtccac
     1081 attgatgact taatgactgt cattacaaat aaatatgata acttaaaata attaagatcg
     1141 aatgaattat aagagtagga aaaagctgaa agaaatctga tgcttatgtc ctgctcttat
     1201 tatttttgat ataatgatta ttcgatgaaa aatgaatgaa gacatagtat aattaaagat
     1261 aaatttgttt taacaatatt atgattagcc aaatataaag catttaattt tctatcatta
     1321 ctatgctcac ataatctaaa tattgttcga acacgtaaaa gtaatttcta tttaaggtgg
     1381 taattgtctt ggcaatgaca gagcaacaaa aatttaaagt gcttgctgat caaattaaaa
     1441 tttcaaatca attagatgct gaaattttaa attcaggtga actgacacgt atagatgttt
     1501 ctaacaaaaa cagaacatgg gaatttcata ttacattacc acaattctta gctcatgaag
     1561 attatttatt atttatacat gcaatagagc aagagtttaa agatatcgcc aacgttacat
     1621 gtcgttttac ggtaacaaat ggcacgaatc aagatgaaca tgcaattaaa tactttgggc
     1681 actgtattga ccaaacagct ttatctccaa aagttaaagg tcaattgaaa cagaaaaagc
     1741 ttattatgtc tggaaaagta ttaaaagtaa tggtatcaaa tgacattgaa cgtaatcatt
     1801 ttgacaaggc ttgcaatgga agtcttatca aagcgtttag aaattgtggt tttgatatcg
     1861 ataaaatcat attcgaaaca aatgataatg atcaagaaca aaacttagct tctttagaag
     1921 cacatattca agaagaagac gaacaaagtg cacgattggc aacagagaaa cttgaaaaaa
     1981 tgaaagctga aaaagcgaaa caacaagata acaacgaaag tgctgtcgat aagtgtcaaa
     2041 ttggtaagcc gattcaaatt gaaaatatta aaccaattga atctattatt gaggaagagt
     2101 ttaaagttgc aatagagggt gtcatttttg atattaactt aaaagaactt aaaagtggtc
     2161 gtcatatcgt agaaattaaa gtgactgact atacggactc tttagtttta aaaatgttta
     2221 ctcgtaaaaa caaagatgat ttagaacatt ttaaagcgct aagtgttggt aaatgggtta
     2281 gggctcaagg tcgtattgaa gaagatacat ttattagaga tttagttatg atgatgtctg
     2341 atattgaaga gattaaaaaa gcgacaaaaa aagataaggc tgaagaaaag cgtgtagaat
     2401 tccacttgca tactgcaatg agtcaaatgg atggtatacc aaatattggt gcgtatgtta
     2461 aacaggcagc agactgggga catccagcca ttgcggttac agaccataat gttgtgcaag
     2521 catttccaga tgctcacgca gcagcggaaa aacatggtat taaaatgata tacggtatgg
     2581 aaggtatgtt agttgatgat ggtgttccga ttgcatacaa accacaagat gtcgtattaa
     2641 aagatgctac ttatgttgta ttcgacgtcg agacaactgg tttatcaaat cagtatgata
     2701 aaatcatcga gcttgcagct gtgaaagttc ataacggcga aatcatcgat aagtttgaaa
     2761 ggtttagtaa tccgcatgaa cgattatcgg aaacgattat caatttgacg catattactg
     2821 atgatatgtt agtagatgcc cctgagattg aagaagtact tacagaattt aaagaatggg
     2881 ttggcgatgc gatattcgta gcacataatg cttcgtttga tatgggcttc atcgacacgg
     2941 gatacgaacg tcttggattt ggaccatcta cgaatggtgt tatcgataca ttagaattat
     3001 ctcgtacgat taatactgaa tatggtaaac atggtttaaa tttcttagct aaaaaatacg
     3061 gtgtagaatt aacgcaacat caccgtgcca tttatgatac agaggcaaca gcttacattt
     3121 tcataaaaat ggttcaacaa atgaaagaat taggcgtatt aaatcataac gaaatcaaca
     3181 aaaaacttag taatgaagat gcatataaac gtgcaagacc tagtcatgtc acattaattg
     3241 tacaaaatca acaaggtctt aaaaatctat ttaaaattgt aagtgcatca ttggtgaagt
     3301 atttctaccg tacgcctcga attccacgtt cattgttaga tgaatatcgt gagggattat
     3361 tggtaggtac agcgtgtgat gaaggtgaat tatttacggc agttatgcag aaggaccaga
     3421 gccaagttga aaaaattgcc aaatattatg attttattga aattcaacca ccggcacttt
     3481 atcaagattt aattgataga gagcttatta gagatactga aacattacat gaaatttatc
     3541 aacgtttaat acatgcaggt gacacagcgg gtattcctgt tattgcgaca ggaaatgcac
     3601 actatttgtt tgaacatgat ggtatcgcac gtaaaatttt aatagcatca caacccggca
     3661 atccacttaa tcgctcaact ttaccggaag cacattttag aactacagat gaaatgttaa
     3721 acgagtttca ttttttaggt gaagaaaaag cgcatgaaat tgttgtgaaa aatacaaacg
     3781 aattagcaga tcgaattgaa cgtgttgttc ctattaaaga tgaattatac acaccgcgta
     3841 tggaaggtgc taacgaagaa attagagaac taagttatgc aaatgcgcgt aaactgtatg
     3901 gtgaagacct acctaaaatc gtaattgatc gattagaaaa agaattaaaa agtattatcg
     3961 gtaatggatt tgcggtaatt tacttaattt cgcaacgttt agttaaaaaa tcattagatg
     4021 atggatactt agttggttcc cgtggttcag taggttctag ttttgtagcg acaatgactg
     4081 agattactga agtaaacccg ttaccgccac actatatatg tccgaactgt aaaacgagtg
     4141 aatttttcaa tgatggttca gtaggatcag gattcgattt acctgataag acgtgcgaaa
     4201 cttgtggagc gccacttatt aaagaaggac aagatattcc gtttgaaaca tttttaggat
     4261 ttaaaggaga taaagttcct gatatcgact taaactttag tggtgaatat caaccgaatg
     4321 cccataacta cacaaaagta ttatttggtg aggataaagt attccgtgca ggtacaattg
     4381 gtacagttgc tgaaaagact gcttttggtt atgttaaagg ctatttgaat gatcaaggca
     4441 tccacaaaag aggcgctgaa atagatcgac tcgttaaagg atgtacaggt gttaaacgta
     4501 caactggaca gcatccaggg ggtattattg tagtacctga ttacatggat atttatgatt
     4561 ttacgccgat acaatatcct gccgatgatc aaaattcagc atggatgacg acacattttg
     4621 atttccattc tattcatgat aatgtattaa aacttgatat acttggacac gatgatccaa
     4681 caatgattcg tatgcttcaa gatttatcag ggattgatcc aaaaacaata cctgtagatg
     4741 ataaagaagt tatgcagatt tttagtacac ctgaaagttt gggtgttact gaagatgaaa
     4801 ttttatgtaa aacaggtaca tttggggtac cagaattcgg tacaggattc gtgcgtcaaa
     4861 tgttagaaga tacaaagcca acaacatttt ctgaattagt tcaaatctca ggattatctc
     4921 atgggacaga tgtgtggtta ggtaatgctc aagaattaat taaaacaggt atatgtgatt
     4981 tatcaagtgt aattggttgt cgtgatgata tcatggttta tttaatgtat gctggtttaa
     5041 aaccatcaat ggcttttaaa ataatggagt cagtacgtaa aggtaaaggt ttaactgaag
     5101 aaatgattga aacgatgaaa gaaaatgaag tgccggattg gtatttagat tcatgtctta
     5161 aaattaagta catgttccct aaagcccatg cagcagcata cgttttaatg gcagtacgta
     5221 tcgcatattt caaagtacat catccacttt attactatgc atcttacttt acaattcgtg
     5281 cgtcagattt tgatttaatc acgatgatta aagataaaac aagcatacga aatactgtaa
     5341 aagacatgta ttctcgctat atggatctag gtaaaaaaga aaaagacgta ttaactgttt
     5401 tggaaattat gaatgaaatg gcgcatcgag gttatcgaat gcaaccgatt agtttagaaa
     5461 agagtcaagc gttcgaattt atcattgaag gcgatacact tattccgccg ttcatatcag
     5521 tgcctgggct tggtgaaaac gttgcgaaac gaattgttga agctcgtgac gatggaccat
     5581 ttttatcaaa agaagattta aacaaaaaag ctggtttatc tcagaaaatt attgagtatt
     5641 tagatgagtt aggctcatta ccgaatttac cagataaagc tcaactttcg atattcgata
     5701 tgtaaaatga aataatcaag gtatttattt aatgcgtatg gcgtagttaa agaaatacaa
     5761 aattgttgct ggacacaaaa ttatgcctgt atttcttttt aacgtcttac gagtctattc
     5821 gaatgtaaag gtgaagtaaa tggacaaact tttacaagaa tctctgatta atagtgaagt
     5881 catttgtttc aagcataaac ttatgctata attaagttgc ttaaaaatta gtgaactcag
     5941 gcagaagagt gggagattcc cgctcttttc tatttgccaa aaagggaggc ctgtatgagt
     6001 aaaattacag aacaagtaga agtgattgtt aaaccaatta tggaagactt gaattttgaa
     6061 cttgtagacg ttgaatatgt caaagagggt agagatcatt ttcttagaat ctctattgat
     6121 aaagaaggtg gcgtagattt aaatgattgt acgctagctt ctgaaaaaat aagtgaagct
     6181 atggatgcaa atgatcctat tcctgaaatg tattatttag acgtagcgtc acctggtgca
     6241 gaacgtccaa ttaaaaaaga acaagatttc caaaatgcaa taactaaacc tgtatttgtt
     6301 tctttatatg taccaattga aggtgaaaag gaatggttag gcattttaca agaagtcaat
     6361 aatgaaacaa ttgtagtaca agttaaaatc aaagcaagaa cgaaagatat agagataccg
     6421 agagacaaaa tagcaaaagc acgtcacgca gttatgattt aacgtgatga ggaggaaaaa
     6481 acgtgtcaag taatgaatta ttattagcta ctgagtattt agaaaaagaa aagaagattc
     6541 ctagagcagt attaattgat gctattgaag cagctttaat tactgcatac aaaaagaatt
     6601 atgatagtgc aagaaatgtc cgtgtggaat taaatatgga tcaaggtact ttcaaagtta
     6661 tcgctcgtaa agatgttgtt gaagaagtat ttgacgacag agatgaagtg gatttaagta
     6721 cagcgcttgt taaaaaccct gcatatgaaa ttggagatat atacgaagaa gatgtaacac
     6781 ctaaagattt tggtcgtgta ggtgctcaag cagcgaaaca agcagtaatg caacgtcttc
     6841 gtgatgctga acgtgaaatt ttatttgaag aatttataga caaagaagaa gacatactta
     6901 ctggaattat tgaccgtgtt gaccatcgtt atgtatatgt gaatttaggt cgtattgaag
     6961 ctgttttatc tgaagcagaa agaagtccta acgaaaaata tattcctaac gaacgtatca
     7021 aagtatatgt taacaaagtg gaacaaacga caaaaggtcc tcaaatctat gtttctcgta
     7081 gccatccagg tttattaaaa cgtttatttg aacaagaagt tccagaaatt tacgatggta
     7141 ctgtaattgt taaatcagta gcacgtgaag ctggcgatcg ctctaaaatt agtgtcttct
     7201 ctgaaaacaa tgatatagat gctgttggtg catgtgttgg tgccaaaggc gcgcgtgttg
     7261 aagctgttgt tgaagagcta ggtggcgaaa aaatcgacat cgttcaatgg aatgaagatc
     7321 caaaagtatt tgtaaaaaat gctttaagcc cttctcaagt gttagaagtt attgttgatg
     7381 aaacaaatca atctacggta gttgttgttc ctgattatca attgtcatta gcgattggta
     7441 aaagaggaca aaacgcacgt ctagctgcta aattaaccgg ctggaaaatt gatattaaat
     7501 cagaaacaga tgcgcgtgaa gcgggtatct atccagtagt tgaagctgaa aaagtaactg
     7561 aagaagatgt tgctttagaa gatgctgaca caacagaatc aaccgaagag gtaactgatg
     7621 tttcagttga aacaaatgta gagaaagaat ctgaataata ggttggagtg aagtatctat
     7681 gaaaaagaaa aaaattccga tgcgaaaatg tattctttca aatgaaatgc atcccaaaaa
     7741 agatatgatt cgtgttgttg ttaataaaga aggcgaaatc tttgcggatg ttactggaaa
     7801 gaaacaaggc cgtggcgcat atgtttctaa agatgttgct atggttgaaa aagcacaaca
     7861 aaaagaaatt ttagaaaaat attttaaagc atctaaagag caattggatc ctgtttacaa
     7921 agaaattatt agattaattt atagagaaga gatcccaaaa tgagtataga tcaaatatta
     7981 aactttttag gattagcaat gagagctggt aaagtaaaaa caggtgaatc agtcattgtt
     8041 aatgaaatta aaaaaggaaa tttgaagctc gttattgttg caaatgatgc gtctgataat
     8101 acagctaaat taattacaga taaatgtaag agttacaaag ttccattcag aaagtttgga
     8161 aatcgaaatg aattgggaat agcacttgga aaaggtgagc gtgttaatgt agggattact
     8221 gacccaggct ttgctaaaaa gttgctatca atgatagatg aatatcataa ggagtgatta
     8281 tatgagtaaa caaagaattt acgaatatgc gaaagaatta aatctaaaga gtaaagagat
     8341 tatagatgag ttaaaaagca tgaatattga ggtttcaaat catatgcaag ctttggaaga
     8401 tgaccaaatt aaagcattag ataaaaagtt caaaaaagaa caaaagaacg acaataaaca
     8461 aagcactcaa aataatcacc aaaaatcaaa caatcaaaac caaaataaag ggcaacaaaa
     8521 agataacaaa aagaatcaac aacaaaataa taaaggcaac aaaggcaata aaaagaataa
     8581 tagaaataat aagaaaaata acaagaataa taaaccacaa aatcaaccag ctgctccaaa
     8641 agaaatacca tcaaaagtga catatcaaga aggtattaca gtaggcgaat ttgcggataa
     8701 attaaatgtt gaatcatcag aaattatcaa aaaattattc ttacttggta ttgttgctaa
     8761 tatcaatcaa tcattaaatc aagaaacaat cgaattaatt gccgatgatt atggcgttga
     8821 ggttgaagaa gaagttgtga ttaatgaaga agatttatca atctacttcg aagataaaaa
     8881 agatgatcca gaagcaattg agagaccagc agttgtaaca attatgggac atgttgacca
     8941 tggtaaaact actttattag attcaattcg tcatacaaaa gttacagcag gtgaagcagg
     9001 cggaatcact caacatattg gtgcatatca aattgaaaac gatggcaaaa aaatcacttt
     9061 cttagataca ccgggacatg ctgcatttac aacgatgcgt gcgcgtggtg cacaagtaac
     9121 agatattaca attttagtag ttgcagctga cgatggtgtt atgccacaaa caattgaagc
     9181 aattaaccat gctaaagaag cagaagtacc aattattgtt gcagtaaata aaattgacaa
     9241 accaatttca aatcctgatc gagttatgca agaattaact gaatatggtt taattcctga
     9301 agattggggc ggcgaaacaa ttttcgttcc actttctgca ttaagtggtg atggtatcga
     9361 cgatttatta gaaatgatag gattagttgc agaagttcaa gaacttaaag caaatcctaa
     9421 aaaccgtgct gttggtacag ttatcgaagc tgaattagat aaatcacgtg gtccttctgc
     9481 atcattatta gtacaaaacg gtacattaaa tgttggggat gcgattgtag ttggtaatac
     9541 ttacggccgt atccgtgcaa tggttaatga cttaggtcaa agaatcaaaa cggctggtcc
     9601 atcaacgcct gttgaaatta caggtattaa tgatgtgcca caagctgggg atcgctttgt
     9661 tgtatttagt gatgaaaaac aagctcgtcg tattggtgaa tcaagacacg aagctagcat
     9721 tgtacaacaa cgtcaagaaa gtaaaaatgt ttcattagat aacctgtttg aacaaatgaa
     9781 acaaggtgaa atgaaagact taaacgttat tattaaaggt gatgttcaag gttctgttga
     9841 agctttagct gcatcattaa tgaaaattga tgttgaaggc gtaaatgttc gtatcattca
     9901 tacagcggtt ggtgcgatta acgagtcaga cgtgacactt gctaatgcct caaatggtat
     9961 tatcattggt ttcaatgttc gtccagacag tggtgcaaaa cgtgctgcag aagctgaaaa
    10021 tgttgatatg cgtttacaca gagttattta taatgttatc gaagaaattg aatcagcgat
    10081 gaaaggttta cttgatccag aatttgaaga acaagttatc ggacaagctg aagttcgtca
    10141 aacattcaaa gtttctaaag ttggtactat tgctggatgt tatgttactg aaggtaaaat
    10201 tacgcgaaat gctggtgtac gtattattcg tgatggtatt gttcaatatg aaggcgaatt
    10261 agatacactt aaacgtttca aagatgatgc taaggaagtt gcaaaaggtt atgaatgtgg
    10321 tattacaatt gaaaactaca atgaccttaa agaaggcgat gttatcgaag catttgaaat
    10381 ggttgaaatt aagcgttaat taaataaatt acaagctaaa agtatagtta agattgatat
    10441 gctccctata aatattgcac tttttaagtg tctactttat agggagcata tttgatacta
    10501 gcttttggat ttttattaga atagattact tattaaaagt tacgttatat agacataatt
    10561 tttgtataaa attttgtggt gacctagaat gctttttaat gacaaaatat aatgtcgact
    10621 attattggaa aattttctgt tgaaatgcct atcttacggc aaactttatt tgattttata
    10681 ggcttaattt attaaaataa cgtgtgagct aaaataattg tttaagcatt gttacactaa
    10741 aaaatgcaaa taacaattga acttaaagat aaagaggtga caagaatgag cagtatgaga
    10801 gcagagcgtg ttggtgaaca aatgaagaag gaattaatgg atatcatcaa caataaagtc
    10861 aaagatcctc gagttggttt tattacaatt acagatgttg ttttaacaaa tgatttatcg
    10921 caggctaaag tatttttaac tgtattaggt aacgataaag aagtagaaaa tacatttaaa
    10981 gcacttgata aagcaaaagg cttcattaag tctgaattag gttctagaat gcgattacgt
    11041 attatgccgg aattaatgta tgaatatgat caatcaatcg aatatggtaa taaaattgaa
    11101 cgaatgattc aagatttaca caaacaagat agataattta gtgttaggta tctggaaaat
    11161 gtttgataat ttcttaatat cggtatatta acattaaaca gttaatacat agatgtgtag
    11221 aaatagttaa cattttccag tttttttatg gataaattca gttaatacgc tattaaaata
    11281 tattttaaaa aaagaaggtg acaacatgta taacggtata ttaccagtat ataaagaacg
    11341 tggtttaaca agtcatgacg tcgtattcaa attgcgtaaa atattaaaaa ctaaaaaaat
    11401 agggcacact ggtacgcttg atcctgaagt tgcaggcgtg ttaccggtat gtataggtaa
    11461 tgcaacgaga gttagtgatt atgttatgga tatgggcaaa gcttatgaag caactgtatc
    11521 gataggaaga agcacaacga ctgaagatca aacgggtgat acattggaaa tgaagggtgt
    11581 acattcagct gatttcaaca atgacgatat tgaccgcttg ttagaaaatt ttaaaggtgt
    11641 tattgaacaa attccgccaa tgtattcatc agtcaaggtg aatggtaaaa aattatatga
    11701 atatgcgcgt aataatgaaa cagttgaaag accaaagcgt aaagttaata ttaaagacat
    11761 tgggcgtata tctgaattag attttaaaga aaatgagtgt cattttaaaa tacgcgtcat
    11821 ctgtggtaaa ggtacatata ttagaacgct agcaactgat attggtgtga aattaggctt
    11881 tccggcacat atgtcgaaat taacgcgaat cgagtctggt ggatttgtgt tgaaagatag
    11941 ccttacatta gaacaaataa aagaacttca tgagcaggat tcattgcaaa ataaattgtt
    12001 tcctttagaa tatggattaa agggtttgcc aagcattaaa attaaagatt cgcacataaa
    12061 aaaacgtatt ttaaatgggc agaaatttaa taaaaatgaa tttgataaca aaattaaaga
    12121 ccaaattgta tttattgatg atgattcaga aaaagtatta gcaatttata tggtacaccc
    12181 tacaaaagaa tcagaaatta aacctaaaaa agtctttaat taaaggagat agaatttatg
    12241 aaagtcatag aagtgacaca tcctatacaa tctaaacagt atattacaga ggatgttgca
    12301 atggcattcg gatttttcga tggcatgcat aaaggtcatg acaaagtctt tgatatatta
    12361 aacgaaatag ctgaggcaca cagtttaaaa aaagcggtga tgacatttga tccgcatccg
    12421 tctgtcgtgt tgaatcctaa aagaaaacga acaacgtatt taacaccact ttcagataag
    12481 atcgaaaaaa ttagccaaca tgatattgat tattgtatag tggttaattt ttcatctagg
    12541 tttgctaatg tgagcgttga agattttgtt gaaaattata taattaaaaa taatgtaaaa
    12601 gaagtcattg ctggttttga ttttactttt ggtaaatttg gaaaaggtaa tatgactgtt
    12661 cttcaagaat atgatgcgtt taatacgaca attgtgagta aacaagaaat tgaaaatgaa
    12721 aaaatttcta caacttctat tcgtcaagat ttaatcaatg gtgagttgca aaaagcgaat
    12781 gatgctttag gctatattta ttctattaaa ggcactgtag tgcaaggtga aaaaagggga
    12841 agaactattg gcttcccaac agctaacatt caacctagtg atgattattt gttacctcgt
    12901 aaaggtgttt atgctgttag tattgaaatc ggcactgaaa ataaattata tcgaggggta
    12961 gctaacatag gtgtaaagcc aacatttcat gatcctaaca aagcagaagt tgtcatcgaa
    13021 gtgaatatct ttgactttga ggataatatt tatggtgaac gagtgaccgt gaattggcat
    13081 catttcttac gtcctgagat taaatttgat ggtatcgatc cattagttaa acaaatgaac
    13141 gatgataaat cgcgtgctaa atatttatta gcagttgatt ttggtgatga agtagcttat
    13201 aatatttaga gttgcgtata gttatataaa caatctatac cacacctttt tcttagtagg
    13261 tcgaatctcc aacgcctaac tcggattaag gagtattcaa acattttaag gaggaaattg
    13321 attatggcaa tttcacaaga acgtaaaaac gaaatcatta aagaataccg tgtacacgaa
    13381 actgatactg gttcaccaga agtacaaatc gctgtactta ctgcagaaat caacgcagta
    13441 aacgaacact tacgtacaca caaaaaagac caccattcac gtcgtggatt attaaaaatg
    13501 gtaggtcgtc gtagacattt attaaactac ttacgtagta aagatattca acgttaccgt
    13561 gaattaatta aatcacttgg tatccgtcgt taatcttaat ataacgtctt tgaggttggg
    13621 gcatatttat gttccaacct taatttatat taaaaaagct ttttacaaat attaacattt
    13681 attatatgtt aagctaatat tgagtgaata ataaggttac aatgagataa agatgatata
    13741 agtacaccta gagtaataat caagatatta aaaataaagt atgtttttta aaaaaatata
    13801 acttatattt atactgataa gggtgggacg ataagtctat tttgtaaata atagatggat
    13861 atcccgctct ctttttttcc aattcaatat tttataacta atattaaaat acgataataa
    13921 atgatatgat ataactatta gattcaagag aggagattta taatgtctca agaaaagaaa
    13981 gtttttaaaa ctgaatgggc aggaagatct ttaacgattg aaacagggca attagctaaa
    14041 caagcaaatg gcgctgtatt ggttcgttat ggagatacag tcgtgttatc gacggcaact
    14101 gcatcaaaag aacctcgtga tggagatttc ttcccattaa cagtgaacta tgaagaaaaa
    14161 atgtacgctg cgggtaaaat tcctggtgga tttaaaaaga gagaaggacg tcctggtgac
    14221 gatgcaacat taactgcgcg attaattgat agaccaatta gacctttatt ccctaaagga
    14281 tataagcatg atgttcaaat tatgaacatg gtattaagtg cagatcctga ttgttcacca
    14341 caaatggctg caatgattgg ttcatctatg gcgcttagtg tgtcggatat tccattccaa
    14401 gggccaatcg ccggtgtaaa tgtgggttat attgatggta aatatatcat taacccaaca
    14461 gtagaagaaa aagaagtttc tcgtttagac cttgaagtag ctggtcataa agatgcagta
    14521 aacatggtag aggcaggcgc tagtgagatt actgaacaag aaatgttaga ggcgattttc
    14581 tttggtcatg aagagattca acgtttagtt gatttccaac aacaaatcgt cgaccacatt
    14641 caacctgtta aacaagaatt tattccagca gagcgtgatg aagcgctagt tgaacgtgta
    14701 aaatctttaa ctgaagaaaa aggacttaaa gaaacagttt taacatttga taaacaacaa
    14761 cgagatgaaa atcttgataa cttaaaagaa gaaatcgtca atgaatttat cgatgaagaa
    14821 gatccagaga atgaattact tattaaagaa gtttatgcaa ttttaaatga attagtgaaa
    14881 gaagaagttc gacgtttaat tgcagatgaa aaaattagac cagacggccg taaacctgat
    14941 gaaatccgtc cattagattc tgaagttggt attttaccta gaacgcatgg ttcaggtcta
    15001 tttacacgtg gtcagactca agcactttca gttttaacgt taggtgcttt aggcgattat
    15061 caattaattg atggtttagg acctgaagaa gaaaaaagat tcatgcatca ttataacttc
    15121 ccgaattttt cagtaggtga aactggtcca gtacgtgcgc caggtcgtcg tgaaattgga
    15181 catggtgcgt taggtgaaag agcattaaaa tatattattc ctgatactgc tgatttccca
    15241 tatacaattc gtattgtaag tgaggtactt gaatcaaacg gttcatcatc tcaagcgtca
    15301 atttgtggat caacattagc attaatggat gcgggagtac cgattaaagc accagttgct
    15361 ggtattgcta tgggccttgt tacacgtgaa gatagctata cgattttaac tgatatccaa
    15421 ggtatggaag atgcattagg tgatatggac tttaaagtcg ctggtactaa agaaggtatt
    15481 acagcaatcc aaatggatat taaaattgac ggtttaacgc gtgaaattat cgaagaggct
    15541 ctagaacaag cgagacgtgg tcgtttagaa ataatgaatc atatgttaca aacaattgat
    15601 caaccacgta ctgaattaag tgcttacgcg ccaaaagttg taactatgac aattaaacca
    15661 gataagatta gagatgttat cggacctggt ggtaaaaaaa tcaacgaaat tattgatgaa
    15721 acaggcgtta aattagatat tgaacaagat ggtactatct ttattggtgc cgttgatcaa
    15781 gctatgataa atcgtgctcg tgaaatcatt gaggaaatta cacgtgaagc ggaagtaggt
    15841 caaacttatc aagccactgt taaacgtatt gaaaaatacg gtgcgtttgt aggcctattc
    15901 ccgggtaaag atgcgttgct tcacatttca caaatttcaa aaaatagaat tgaaaaagtg
    15961 gaagatgttt taaaaatcgg tgacacaatt gaagttaaga ttactgaaat tgataaacaa
    16021 ggtcgagtaa atgcttcaca cagagcatta gaagaataat atttaaagtc atatgacgac
    16081 aatgtatcgt catgtgattt ttttatgcca ttttttacga agtgatccat tttgaatttg
    16141 ttgtattgaa cattttaaaa cgctttatta ttttgtgtgc aactgttaat tatcctgtat
    16201 gtatagtgat taatagtgta catcaagtgt tttttaactt ataatgaata gtgagtttat
    16261 atatggacgg gtaacaaatt taggaggtaa gattttgagt ttaataaaga aaaagaataa
    16321 agatattcgc attataccat taggcggtgt tggcgaaatt gctaaaaata tgtatatcgt
    16381 tgaagtagac gatgaaatgt ttatgttaga tgctggactt atgtttccag aagacgaaat
    16441 gctaggtatt gatattgtta taccagacat ttcatacgta cttgaaaata aagataaatt
    16501 gaaggggata ttccttacac acggacatga gcacgcgatt ggtgcagtga gttatgtttt
    16561 agaacaatta gatgcaccag tatatggatc taaattgaca atagcgttaa ttaaagaaaa
    16621 tatgaaagcc cgtaatattg ataaaaaagt tcgctactac acagttaata atgattcaat
    16681 tatgagattc aaaaacgtga atattagttt ctttaatacg acacacagta ttcctgatag
    16741 tttaggtgtt tgtattcaca cttcatatgg tgccattgtg tatactggtg aatttaagtt
    16801 tgaccaaagt ttacatggac attatgcacc agatattaaa cgtatggcag agattggtga
    16861 agaaggcgta tttgtcttaa tcagtgattc tactgaggca gagaaacctg gatataatac
    16921 tccggaaaat gtgattgaac atcatatgta tgatgctttt gcaaaagtgc gaggtcgctt
    16981 gatagtttca tgttatgctt cgaactttat acgtattcag caagttttaa atattgctag
    17041 caagctaaat cgtaaagtgt catttttagg aagatcactt gaaagttcat ttaatattgc
    17101 tcgtaaaatg gggtatttcg acattcctaa agatttgcta attcctataa cagaagttga
    17161 taattatcct aaaaatgaag taataattat agctactggt atgcaaggag aacctgtaga
    17221 agccttaagt caaatggcgc aacataagca taaaattatg aatatcgaag aaggtgattc
    17281 tgtattttta gcaattacgg cttctgctaa tatggaagtt atcattgcga atacattaaa
    17341 tgagcttgta cgtgctggcg cacatattat tccaaataac aagaagattc atgcttcaag
    17401 tcatggttgc atggaagaat taaaaatgat gattaatatt atgaaacctg aatactttat
    17461 tcctgtacaa ggtgaattta aaatgcagat agcacatgcg aagctagcag ctgaagcagg
    17521 tgttgcacca gaaaagattt tccttgtgga aaaaggagat gtcattaatt acaacggtaa
    17581 agatatgata ttaaatgaaa aggtaaattc aggaaatatt ttaatagatg gtattggtat
    17641 tggggatgta ggaaatatcg tgttgagaga ccgccatctt ttagcagaag atggtatctt
    17701 tattgctgta gtaacgttag atcctaaaaa tagacgtata gctgcgggac ctgaaattca
    17761 atctcgtgga tttgtatatg tacgtgaaag tgaagactta ttacgtgaag cagaagagaa
    17821 agtacgtgaa atagtagaag ctggtttaca agaaaaacgc atagaatggt ctgaaattaa
    17881 gcaaaatatg cgtgatcaaa ttagtaaact attattcgaa agtacaaaac gtcgtcctat
    17941 gattattcca gtaatttctg aaatttaatc aaaaagtcat taacataaaa gaggtcagaa
    18001 caagtcaccg aaatataatg gttgtcattg acaatttact tatattttat gatggtcaat
    18061 tgaaaggggt aacgattaat ctgttatctt aagtaaattg atacatagat gatattgttc
    18121 taacctcttt catcgtctgt ttggactaca tattctaaac atcaaatagg aaattatata
    18181 taataacgtc gttttaacta aggtaacata aggaggtgcg tcaattggca caagcaaaaa
    18241 agaaatcgac agctaagaaa aaaacaacat caaaaaaaag aacaaattcg aggaaaaaga
    18301 agaatgataa tccgatacgt tatgtcatag ctattttagt aattgtatta atggtgttgg
    18361 gtgttttcca attaggaata ataggtcgtc taattgacag cttctttaat tatttatttg
    18421 ggtacagtag atatttaaca tatattttag tactcttagc aactggtttt attacatact
    18481 ctaaacgtat tcctaaaact agacgaacgg ctggttcgat tgtattgcaa attgcattgc
    18541 tatttgtatc acagttagtt tttcatttta atagtggtat caaagctgaa agagaacctg
    18601 tactttctta tgtgtatcag tcataccaac acagtcattt tccaaatttt ggtggcggtg
    18661 tattaggctt ttatttatta gagttaagcg tacctttaat ttcattattt ggtgtatgta
    18721 ttattactat tttattatta tgctcaagtg ttattttatt aacaaaccat caacatcgtg
    18781 atgttgcaaa agttgcactg gaaaatataa aagcttggtt tggttcattt aatgaaaaaa
    18841 tgtccgaaag aaaccaagaa aaacaattga agcgtgaaga aaaagcgaga cttaaagaag
    18901 aacaaaaggc acgtcaaaat gaacagccac aaataaaaga tgtgagtgat tttacggaag
    18961 tgcctcaaga aagagatatt ccaatttatg ggcatactga aaatgaaagt aaaagccaga
    19021 gtcaaccaag tcgaaaaaaa cgagtgtttg atgcagagaa tagttcgaat aacatcgtaa
    19081 atcatcatca agcagatcag caagaacaat taacagaaca aactcataac agtgttgaaa
    19141 gtgaaaacac tattgaagaa gctggtgaag ttacgaatgt gtcgtatgta gttccaccgt
    19201 taactttact taatcaacct gcaaaacaaa aagcaacatc taaagctgaa gtgcaacgta
    19261 aaggacaagt actagataat acattaaaag attttggggt aaatgcaaaa gtgacacaaa
    19321 ttaaaattgg tcctgcagta actcaatatg aaattcaacc agctcaaggg gttaaagtga
    19381 gtaaaattgt aaacttgcat aatgatattg cattagcttt agcagcaaaa gatgttagaa
    19441 ttgaagcgcc aatacctggt cgctctgcag taggtattga agtgccaaat gagaaaattt
    19501 cattagtttc actaaaagaa gttttagatg aaaaattccc gtctaataat aaactagaag
    19561 ttggattagg aagagatata tcaggtgatc caattactgt tccacttaat gaaatgcccc
    19621 acttattggt ggcaggatcg acgggtagtg gtaaatctgt ttgtataaat ggtattatta
    19681 caagtatttt attaaatgct aagccgcatg aagttaaact tatgttaatc gatccgaaaa
    19741 tggttgaact aaatgtttat aacggaattc cacatttatt aattccggtt gttacaaatc
    19801 ctcataaagc tgctcaagct ttagaaaaaa ttgtagctga gatggaaaga cgttatgatt
    19861 tattccaaca ttcatcaact agaaatatta aaggttataa cgaattaatc cgtaagcaaa
    19921 atcaagaatt agatgagaag caaccagaat taccttatat cgttgttatt gtagatgagc
    19981 ttgcagattt aatgatggta gctggtaaag aagttgaaaa tgcgattcaa cgtatcacac
    20041 aaatggcacg tgcagcaggt atacatttga ttgtagcgac acaaagacct tctgtggatg
    20101 taattacagg tatcattaaa aataatattc catctagaat tgcttttgct gtgagttctc
    20161 aaacagattc aagaactatt attggtactg gtggcgcaga aaagttactt ggtaaaggtg
    20221 acatgttata cgttggaaat ggtgattcat cacaaacacg tattcagggg gcgtttttaa
    20281 gtgaccaaga ggtgcaagat gttgtaaatt atgtagtaga acaacaacag gcaaattatg
    20341 taaaagaaat ggaaccagat gcaccagtgg ataaatcgga aatgaaaagt gaagatgctt
    20401 tatatgatga agcgtatttg tttgttgttg aacaacaaaa ggcaagtaca tcattgttac
    20461 aacgccaatt tagaattggt tataatagag catctaggtt gatggatgat ttagaacgca
    20521 atcaggtaat cggtccacaa aaaggaagca agcctagaca agttttaata gatcttaata
    20581 atgacgaggt gtaaaaaaat gtcagaaatg aatgcggtat ataacgttaa acaatacatt
    20641 ttaaatttga ttaagcaaaa taaattggaa tatggtgacc aacttccaag taatttatca
    20701 attgccagag aattaaatgt aaaaaccgac gatgtttatg aagcaattca ggcattgatt
    20761 actgaacaag tcattaaaga taattttgaa gagggcacaa gtgttaagtc actgccccct
    20821 ttcttttatc cattgaatga acttataagt attgggcaaa tgattaaaaa tgcaggattt
    20881 gaatgcggaa ctgaatactt aaattttgat gagcaaccag caactatgtt agatacaaat
    20941 ttgttgagcg ttgaagaagg atatccagta accattatag aacgattacg aactgccgat
    21001 ggagaaccgg tcgtctattg tttagataaa attgctaaaa aagaattaac atgtacagag
    21061 tatcaaatga gtaatggatc gattctaagt gcgataaaag aacaaagtaa tcataatatt
    21121 tgttatgctg atacagaaat tgaagcggta aattatgaac ctcgaatatc cgaagtactg
    21181 aatgcttcgc cacacgaagg tttgatttta ttaaaaatta cgcactacaa tgaatcagat
    21241 gaacctattt tgtattcatt aaattatatg aaaaatagct tagttcaatt taaaatcact
    21301 agaaaaatat agatgtaaga agatatagag gaggctatat atttgagtag acaatctcaa
    21361 ccaaatatac atatcaaagt ttcaccaaca actaaattta aaacaactac tatagttttt
    21421 aaatttatgg cacctttaga atatgacaca ataacagcta gatcattatt aagcaaatta
    21481 ttagttcgag caactaagaa atggccaact gataagtcgt ttaataatca cttagccgat
    21541 ttatatggtg cgtatgtgaa tagtacaatt tcaaaattca aagatcagca tgtcattaca
    21601 ttttcattag aaattgttaa tgaacgttat ttaagaaacg gtgaatcatt atttaatcaa
    21661 ggattagatt tattacaaga aatcatttgg aatccattaa ttgaaaataa agcattcaat
    21721 gataattttg ttaaccaaga gaaaacatta ttagccaaaa aaatagaagc aatggtagat
    21781 aacaaagcac aatattcgtt tttaaaatta ctcgaccata tgtttgaaaa tgaagcatat
    21841 aaatacttat ctacaggaca actagaacaa atcccacata ttactgctga aacactatat
    21901 catacatatc aatcaatgat taataatgat caatgttctg tttatgttgt cggcaatgta
    21961 gaacctgaaa gtgttgagaa acaaatactt gaaaaatttg cacttaaacc attcgataaa
    22021 catcaattcc aacattctac tcatcattta cacgatgaag aagttgatta tattgttgaa
    22081 tatgatgacg tggatcaagc taaattaaat atgggatacc gttttccaac acaatatgga
    22141 caaagtggat atgctgcctt tgttgtattt aacatgatgt ttggaggaga tccttcatct
    22201 gttttattta atgaagtgcg agaaaagcaa agtttagcgt actctataca ttcacaaatt
    22261 gatggcaaaa atggctattt atttgttttg agtggggttt caagtgataa gtacgaaact
    22321 gcaaaagaca ctattataag tgaatttgaa aaaataaaag caggagattt cactgaagaa
    22381 aaattagagt tagctaaaaa agtaatcatt tctcatcgat atgaatctga agatcgtccg
    22441 aaaagtatta tagagattat gcataaccaa atattattag agcaaccaca aagcaaagaa
    22501 acatttataa atgatataca gaaggtaagt cgcgaagata ttgtttctgt tgctgaaaaa
    22561 gcatttttag atacaatcta tgtgttgaca aaaggagggg ataaataatg aaagagcgtt
    22621 attatgaatt aatagacgaa agagtattcg aacaagaatt agaaaatggt ttacgattat
    22681 ttgttatccc caaaccaggt tttcaaaaga catttgtcac ttacactaca caatttggtt
    22741 cattagataa tcaattcaaa ccacttggac aagaccaatt tgttactgta cctgatggag
    22801 ttgctcactt tttagaacat aaattatttg aaaaagaaga agaagactta tttactgcgt
    22861 ttgctgaaga taatgcacaa gcaaatgcgt ttacaagctt tgatcgtaca agctacttgt
    22921 tcagtgcaac tgataatatt gaaaacaaca ttaaacgttt acttacaatg gttgaaacgc
    22981 cttattttac aaaagaaact gttgataaag aaaaaggtat tattgcagaa gaaataaaaa
    23041 tgtatcaaga acaacctgga tataaattaa tgtttaatac attgcgtgca atgtatcaac
    23101 aacatccaat acgtgttgat attgccggta gtgtagaaag tatatacgat attacaaaag
    23161 atgatttgta tctatgttat gaaacgtttt atcatccatc aaatatggtt ttatttgttg
    23221 ttggtgatgt gaatccagaa gaaatatgtc gaatagtaaa acaacacgag gatgctcgta
    23281 ataaagttaa ccaacccaaa atcgaacgag gacttgttga tgaaccggag gatgttaaag
    23341 aagcatttgt tactgaatct atgaaaattc aatcaccaag actaatgctt ggttttaaaa
    23401 ataaaccatt acaagaagcg cctcaaaaat atgtacaacg tgatttagaa atgtcattat
    23461 tctttgagtt aatttttggg gaagaaacag atttttatca gaatttatta aacgaaggac
    23521 ttatcgatga tacatttggt tatcaatttg tactagagcc gacgtatagt ttttcaatcg
    23581 tgacaagcgc tactgaagaa ccagataaat taaaaaaatt attattagat gagttgcgtg
    23641 ataaaaaagg caatttccaa gatgcagaag catttgaact tttgaaaaag caatttatag
    23701 gtgagttcat atcaagttta aactcacctg aatatattgc taatcaatat actaaattgt
    23761 attttgaagg tgttagtgtg tttgacatgt tagacattgt tgaaaacatc acgttagata
    23821 gtattaacga aacgtcatcg ttatatttaa atttagatca gcaagtcgat agtcgtttgg
    23881 agattaaaaa gtaatgaaag cattagtatt aggtggttct ggttcaattg gttctgagat
    23941 agtcaaacaa ttattaactg atggatttga agtttatgtg caatattatc gtactgatat
    24001 aaatgaatta actagcaaat ttaacgatga taaagttcat tttatacaag cggatttatc
    24061 tcaaacaatt gatattgaca aaacatttgg tgacattaaa tcattagact gtttaatata
    24121 tgcaagtggt cagtctttat atggtgtttt acaagatatg aaagaccatg atattgatgc
    24181 atgttatcag ttaaatgtct tgcaattaat tcgattatgt agatatttcg ttgatgtttt
    24241 acgtcaaagt gacaatggaa gaattattgt aatttcatca atttggggtg agacaggagc
    24301 tagtatggaa actatttatt cgacgatgaa aagtgcacaa ttaggtttcg ttaaggcgct
    24361 tagtcaagag cttgcactaa catcagtgac agtaaatgct atctcacctg gatttgtagc
    24421 tggtaatatg gcaagcgagt ggcaagaaga tgaacttcaa gcaatgataa ctgaattacc
    24481 acaacagcga ttggttttac cgagtgaggt tgctcataca tgcgcctatt tatatcaccc
    24541 aaatgctaga agtgttactg gaactataca gaaagttaat ggtgcttggt atatttaaaa
    24601 tatagaacta tttttatgag caaatgtttt tatgattgat gttataatat gaatattaca
    24661 atgaatcata atttgttaat taaacaaggg gtgaggttca ccatgacagt tgcagagaaa
    24721 aaagaatggt acttagaata cgaaattgaa attaatagac cgggtctttt aggtgatgta
    24781 tctagtttat taggtatgtt aggtataagt attgttacaa ttaatggtgt tgatcaaggt
    24841 aaacgaggcc ttttaattaa aacagacaat cttgaaaaag ttgaacgttt tgagcaaata
    24901 gctcgtggta taaatgaaat tgaaataaca aagcttaaaa aaccagaatt aagagaccgt
    24961 cttgcagtta gacatggtag atatattgag caagatgcaa aagataagaa aacctttcga
    25021 tttgagcgtg aagatttagg cttgttagta gactttttag ctgaattgtt caaagaagaa
    25081 ggtcataagt tgattggcat tagaggtatg ccacgggttg gtaaaactga atcaattgtt
    25141 gcgggaagtg tttgtgcaca taagagatgg ttatttatta gttctacttt aataaaacaa
    25201 actgtacgta gctctctaat caaaggggaa tatgatgcca atcatgtata tattattgat
    25261 ggtgcagtta ctgccagaga atctaatcca aaacatcaag agcttgttaa cgaagttatg
    25321 acgttaccat caatcaaagt cgttgaacat ccagatttat ttgttgaaac aagtacttgt
    25381 acaatggaag attttgacta tattatcgaa ttgagagaaa atgaaaatca agaaatacaa
    25441 tacgaagaaa tgaagaaaca gacagtccaa agtaagaata atttagattt tggagatcca
    25501 tttggtggtg gttttggttt cttcgagtaa gtgtaaggag gctatgaatt gaaaacggtc
    25561 ggtgaagcgc taaaaggtag acgtgaaagg ttaggaatga ctttaacaga attagagcaa
    25621 cgtactggaa ttaaacgtga aatgctagtg catattgaaa ataatgaatt cgatcaacta
    25681 ccgaataaaa attacagcga aggatttatt agaaaatatg caagcgtagt aaatattgaa
    25741 cctaaccaat taattcaagc tcatcaagat gaaattccat cgaaccaagc cgaatgggac
    25801 gaagtaatta cagttttcaa taataataaa gacttagatt ataagagtaa atcaaaagag
    25861 ccaatacaat tattagtaat catgggtatt acagttttaa taactttatt gttatggatc
    25921 atgttagttt taatatttta acagaaataa attagtgaga aatgaggatg tataatgaat
    25981 attccgaacc agattacggt ttttagagta gtgttaatac cagtttttat attgtttgcg
    26041 ttagttgatt ttggatttgg caatgtgtca tttctaggag gatatgaaat aagaattgag
    26101 ttattaatca gtggttttat ttttatattg gcttccctta gcgattttgt tgatggttat
    26161 ttagctagaa aatggaattt agttacaaat atggggaaat ttttggatcc attagcggat
    26221 aaattattag ttgcaagtgc tttaattgta cttgtgcaac taggactaac aaattctgta
    26281 gtagcaatca ttattattgc cagagaattt gccgtaactg gtttacgttt actacaaatt
    26341 gaacaaggat tcgtaagtgc agctggtcaa ttaggtaaaa ttaaaacagc agttactatg
    26401 gtagcaatta cttggttgtt attaggtgat ccattggcaa cattgattgg tttgtcatta
    26461 ggacaaattt tattatacat tggcgttatt tttactatct tatctggtat tgaatacttt
    26521 tataaaggta gagatgtttt taaacaaaaa taaatatttg tttatactag atttcatttt
    26581 catatggaat ctagtttttt aatcccaatt ttagaaatta gccacgcaat tgtttataat
    26641 g
//
LOCUS       DALMNS010000028        26610 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.028, whole genome shotgun sequence.
ACCESSION   DALMNS010000028 DALMNS010000000
VERSION     DALMNS010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 26610)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26610)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26610
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.028"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(188..1999)
                     /locus_tag="O6Y56_000978"
     CDS             complement(188..1999)
                     /locus_tag="O6Y56_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDB5574257.1"
                     /translation="MDTKDFKRLEKMYSPRYLPGLDGLRAFAVIGIIIYHLNAQWLSG
                     GFLGVDTFFVISGYLITSLLISEYYRTQKIDLLEFWKRRLKRLIPAVLFLICVVLTFT
                     LIFKPELIIQMKRDAIAAIFYVSNWWYISQNVDYFNQFAIEPLKHLWSLAIEEQFYLL
                     FPLVITFLLHRFKPRNIIQTLFIVSLISLGLMIVIHFITGDNSRVYFGTDTRLQTLLL
                     GCILAFIWPPFALKKDISKKIVVSLDIIGISGFAVLMTLFFIVGDQDQWIYNGGFYII
                     SFATLFIIAIAVHPSSLFAKFLSMKPLLIIGKRSYSLYLWHYPIIVFVNSYYVQGQIP
                     VYVYIIEILLTALMAEISYRFIETPIRKKGFKAFAFLPKKKSQFARTALVILLLIPSI
                     IVLSGQFDALGKQHEAEKKEKKTEFKTTKKKVVKKDKQEDKQTANSKEDIKKSSPLLI
                     GDSVMVDIGNVFTKKIPNAQIDGKVGRQLVDATPIVKSQYKDYAKKGQKVVVELGTNG
                     AFTKDQLNELLDSFGKADIYLVSIRVPRDYEGRINKLIYEAAEKRPNVHLVDWYKASE
                     GHPEYFAYDGIHLEYAGSKALTDLIVKTMETHATNKK"
     gene            complement(2504..2992)
                     /locus_tag="O6Y56_000979"
     CDS             complement(2504..2992)
                     /locus_tag="O6Y56_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5574258.1"
                     /translation="MAINIIEYNRSYKEELIKFILSIQKNEFNINIDRNDQPDLENIE
                     HNYLNSGGQFWLAINNHQNIVGTIGLIRLDNNMSALKKMFVDEGYRNLKIGKKLLDKV
                     IMTCKEQNIDGIYLGTIDKFISAQYFYSNNGFREIKRGDLPSSFPKLDVDNRFYYRNL
                     KD"
     gene            complement(3268..3969)
                     /gene="isaA"
                     /locus_tag="O6Y56_000980"
     CDS             complement(3268..3969)
                     /gene="isaA"
                     /locus_tag="O6Y56_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase IsaA"
                     /protein_id="HDB5574259.1"
                     /translation="MKKTIMASSLAVALGVTGYAASTGHEAHAAEMNVDQAHLVDLAH
                     NHQDQLNAAPIKDGAYDIHFVKDGFQYNFTSNGTTWSWSYEAANGQTAGFSNVAGADY
                     TTSYNQGSNVQSVSYNAQSSNSNVEAVSAPTYHNYSTSTTSSSVRLSNGNTAGATGSS
                     AAQIMAQRTGVSASTWAAIIARESNGQVNAYNPSGASGLFQTMPGWGPTNTVDQQINA
                     AVKAYKAQGLSAWGF"
     gene            complement(4578..5633)
                     /locus_tag="O6Y56_000981"
     CDS             complement(4578..5633)
                     /locus_tag="O6Y56_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIC"
                     /protein_id="HDB5574260.1"
                     /translation="MTSIKTITPKDFIFRVLSGVAIGIVAGLVPNAILGEIFKYFMDY
                     HPIFKTLLGVVVAIQFTVPALIGALVAMKFDLSPLAIAVVASAAYVGSGAAQFKNGAW
                     MITGIGDLINTMITAAIAVLFILLIQHRVGSMALIVFPTVVGGISGAIGVLILPYTKM
                     ITTAIGNMVNGFTELQPIVMSILISMVFSLIIISPLSTVAIAFAIGITGLAAGSASIG
                     ISATEAVLIIGTSKVNRLGVPLSVFFGGVKMMIPNMVKYPILMLPILTTAIVSGLVSA
                     LVGIHGTKESAGFGFIGMVGPINAFKFMEVDSAWLSVLLIVVAFFVVPFVTAWLADII
                     YRKVFRLYTNDIFKFMG"
     gene            complement(5760..5888)
                     /locus_tag="O6Y56_000982"
     CDS             complement(5760..5888)
                     /locus_tag="O6Y56_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574261.1"
                     /translation="MDFKNEDKIKVYCNNMFEKLPISLSKNSEFCDILFFIVLSYR"
     gene            6043..6612
                     /locus_tag="O6Y56_000983"
     CDS             6043..6612
                     /locus_tag="O6Y56_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDB5574262.1"
                     /translation="MMESKSIDPRIVRTKQLLVDAFLKISREKKLSQITVKDITDIAT
                     LNRATFYAHFTDKEDLLDYTLSVTILKDLNDNLSISSVINEKVLRNIFISIASYIKDA
                     AKSCELNSEAFCNKAHQRINNELEDIFAIMLENSYPEHQRDIIVNSGSFLAAGISGLA
                     LHWFNTSQETADVFIDRNLPFLIHHIAHF"
     gene            6810..7310
                     /locus_tag="O6Y56_000984"
     CDS             6810..7310
                     /locus_tag="O6Y56_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574263.1"
                     /translation="MTSIFVFAYLNNTSGNMLFRQQMICACLLANVRHSSIVCLNNTC
                     RIVDMRCLNTKIGGIDVSETDEPQGFEHTHNILNINQNSQSLMTFITSKLKSKLKQHI
                     IIARGKKRIDYRLSYNFYTTHYDNVEIKKIDCEYTYAMPIAILIRHMMSFDNAHFFAQ
                     LRHPVL"
     gene            7530..7760
                     /locus_tag="O6Y56_000985"
     CDS             7530..7760
                     /locus_tag="O6Y56_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF896 domain-containing protein"
                     /protein_id="HDB5574264.1"
                     /translation="MKILDRINELANKEKVQPLTVAEKQEQHALRQDYLSMIRGQVLT
                     TFSTIKVVDPIGQDVTPDKVYDLRQQYGYIQN"
     gene            complement(7923..8300)
                     /locus_tag="O6Y56_000986"
     CDS             complement(7923..8300)
                     /locus_tag="O6Y56_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDB5574265.1"
                     /translation="MIQSMWFNLHVQDLEKSAQFYKALGFKINRNPQMLDKMVGIQIG
                     QTTVILIENKHFQNVSQQSLNTEPNEVMISLGVNTNEEVDQLVNKVKEAGGTVVQEPT
                     VSQGFYGAMFKDLDGHHFNFLVC"
     gene            complement(8317..9138)
                     /locus_tag="O6Y56_000987"
     CDS             complement(8317..9138)
                     /locus_tag="O6Y56_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA/HSCARG family protein"
                     /protein_id="HDB5574266.1"
                     /translation="MKDILVIGATGKQGNAVVKQLLEDGWYVSALTRNKNNRKLSDIG
                     HPHLSIVEGDLSDNVSLQSAMKGKYGLYSIQPIVKDDVNEELRQGMKIIEIAEQENIQ
                     HIVYSTAGGVNRNRTGPHFEVLAKIENRLMESNINATIIKPSFFMDNFLRIAKVEDER
                     ITLPEFINPNIKFTMISSIDIAKIASYIFAHPQSFTHQSIEIGSDEVTLSEAATIFSE
                     VTGKSTVIEGEFVSGVAEKQWLEEKGYEVDFELMAEINPTRLSLSDWLKVQDYNK"
     gene            complement(9157..9456)
                     /locus_tag="O6Y56_000988"
     CDS             complement(9157..9456)
                     /locus_tag="O6Y56_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2316 family protein"
                     /protein_id="HDB5574267.1"
                     /translation="MSLNKEQRRITAEELQAHFEESTLSVQMIAEKLNVTTEDVEKVL
                     AMTAPLGIFSHQLQRFIHLVWDVRDVINDNIKGNGQTPEPYTYLKGEKEDYWFLR"
     gene            9587..10144
                     /locus_tag="O6Y56_000989"
     CDS             9587..10144
                     /locus_tag="O6Y56_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDB5574268.1"
                     /translation="MRKDAIENRQRIEEIAHKLFDEEGVENISMNRIAKELGIGMGTL
                     YRHFKDKSDLCFYVIQRDLNTFITRFKQIKDDYHSNYEVMKVSLDYLLQFKIDNKTLL
                     HCIEAGNNKLRFYQSAFYQELFDFYYDLFKSDDDIFTKFKTDMLLQSLSTSVFAFQIE
                     HRHISIEAYRNYLLNIYLDEVERND"
     gene            10137..10841
                     /locus_tag="O6Y56_000990"
     CDS             10137..10841
                     /locus_tag="O6Y56_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDB5574269.1"
                     /translation="MTKIVLITGGNKGLGYASAEALKALGYKVYIGSRNDVRGQQASQ
                     KLGVHYVQLDVTSDYSVKNAYNMIAEKEGRLDILINNAGISGQFSAPSKLTPRDVEEV
                     YQTNVFGIVRMMNTFVPLLEKSEQPVVVNVSSGLGSFGMVTNPETAESKVNSLAYCSS
                     KSAVTMLTLQYAKGLPNMQINAADPGATNTDLVGDFSNNSKHVSEGIKPIIQLATIGV
                     DGPTGTFINGDGEMPW"
     gene            10939..11949
                     /locus_tag="O6Y56_000991"
     CDS             10939..11949
                     /locus_tag="O6Y56_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDB5574270.1"
                     /translation="MKSITFEEHYVIEDIQKETMNAMSADPKGVPMKIMLEGLEKKTG
                     FTNADELSHHDERIQFMNNQDVQIQVLSYGNGSPSNLVGQKAIELCQKANDQLANYIA
                     QYPNRFVGFATLPINEPEAAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKT
                     AENLDVPIYLHPAPVNSDIYQSYYKGNYPEVTAATFACFGYGWHIDVGIHAIHLVLSG
                     IFDRYPKLNMIIGHWGEFIPFFLERMDEALFAEHLNHPVSYYFKNNFYITPSGMLTKP
                     QFDLVKKEVGIDRILYAADYPYIEPEKLGVFLDELGLTDEEKEKISYTNGAKLLGLSS
                     NN"
     gene            11969..12799
                     /locus_tag="O6Y56_000992"
     CDS             11969..12799
                     /locus_tag="O6Y56_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDB5574271.1"
                     /translation="MEILELQGAKLRYHQVGQGPVLIFIPGANGTGDIFLPLAEQLKD
                     HFTVVAVDRRDYGESELTEPLPDSASNPDSDYRVKRDAQDIAELAKSLSDEPVYILGS
                     SSGSIVAMHVLKDYPEVVKKIAFHEPPINTFLPDSTYWKDKNDDIVHQILTEGLEKGM
                     KTFGETLNIAPIDAKMMSQPADTEEGRIEQYKRTMFWSEFEIRQYTHSDITLDDFTKY
                     SDKITLLNGTDSRGSFPQDVNFYINKETGIPIVDIPGGHLGYIQKPEDFADVLLNMWG
                     "
     gene            complement(12946..13836)
                     /locus_tag="O6Y56_000993"
     CDS             complement(12946..13836)
                     /locus_tag="O6Y56_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HDB5574272.1"
                     /translation="MKIVIIGGFLGGGKTTVLNHLLAESLKESLKPAVIMNEFGKMSV
                     DGALVSEDIPLSELTEGCICCAMKADVSEQLHQLYLKEQPDIVFIECSGIAEPVSVLD
                     ACLTPILAPFTTITHMIGVIDASMYKHIKSFPKDIQGLFYEQLAYCSVLFVNKIDSAD
                     VETTSKLLKDLEVINPEVDIQVGMHGSVTLPISVRQMTATSDDKHKSLHQMINHQFVQ
                     SPVKCTKAQFIKRLACLPSHIYRLKGFMTFEDTTHTYLIQFTQGQYELTPVAFSKKVP
                     EYLVLIGKGISKEDYQCLEQ"
     gene            complement(13936..15276)
                     /locus_tag="O6Y56_000994"
     CDS             complement(13936..15276)
                     /locus_tag="O6Y56_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000895187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter B"
                     /protein_id="HDB5574273.1"
                     /translation="MLEVKYDMRTGHYTPIPNEPHYLVISHADKLTATEKAKLRLLII
                     KQKLDISLAESVVSSPIASEHVIEQLTLFQHERRHLRPKISATFLAWLLIFLMFALPI
                     GIAYQFSDWFQNQYVSAWIEYLTQTTLLNQDILQHILFGDYGVLSLGTYSLVWALPVV
                     ILISLSTAVIDQTGLKSWMIWAIEPSMLRIGLQGNDIVPLLEGFGCNAAAISQAAHQC
                     HTCTKTQCMSLISFGSSCSYQIGATLSIFSVAGKSWLFMPYLILVLLGGILHNRIWLK
                     KNDQQLSVPLPYDRQLHVPNIRQMLLQMWQNIQMFIVQALPIFITICLIVSILSLTPI
                     LNVLSQIFTPILSLLGISSELSPGILFSMIRKDGMLLFNLHQGALLQGMTATQLLLLV
                     FFSSTFTACSVTMTMLLKHLGGQSALKLIGKQMVTSLSLVIGVGIIVKIVMLII"
     gene            complement(15270..16376)
                     /locus_tag="O6Y56_000995"
     CDS             complement(15270..16376)
                     /locus_tag="O6Y56_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HDB5574274.1"
                     /translation="MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKH
                     WPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYEL
                     NIFENTVVTNISVDDAYYTIATTTETYHADYIFVATGDYNFPKKPFKYGIHYSEIEDF
                     DNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQR
                     LGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPI
                     VQQLFATTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLT
                     QREGLPAKQDVIENYQKNQMYLDDYSCCEVSCTC"
     gene            complement(16712..17008)
                     /locus_tag="O6Y56_000996"
     CDS             complement(16712..17008)
                     /locus_tag="O6Y56_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4176 domain-containing protein"
                     /protein_id="HDB5574275.1"
                     /translation="METIGSIIYLKEGSQKLMIINRGPIVEIENQKYMFDYSACKYPI
                     GVVEDEIYYFNEENIDSVIFKGYSDQDEVRFQELFDNMKQNLDSEIQRGEVTPQ"
     gene            complement(16996..17364)
                     /locus_tag="O6Y56_000997"
     CDS             complement(16996..17364)
                     /locus_tag="O6Y56_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574276.1"
                     /translation="MSNKLDGINKMITTKHKQMDDLYDEKQEVKALIDESDALNHSID
                     QLYQHLSERYYSSNMASRMEQFRDEFHFAKRRSTEALYEQQQQIQHGIRKAEEEMIDL
                     EMRRNIEIETVTKEENKWKQ"
     gene            complement(17379..17657)
                     /locus_tag="O6Y56_000998"
     CDS             complement(17379..17657)
                     /locus_tag="O6Y56_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04197 family type VII secretion effector"
                     /protein_id="HDB5574277.1"
                     /translation="MMSTVQSDIFKTNSASSSIKSAVETCNNVSKPDKDESTTVSGNN
                     NAHSVIDDLISKNQSVAEAIRTASDNIQKVGEAFDQTDVMIGNEIGKN"
     gene            complement(17994..18860)
                     /locus_tag="O6Y56_000999"
     CDS             complement(17994..18860)
                     /locus_tag="O6Y56_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001005521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HDB5574278.1"
                     /translation="MNEQWLEHLPLKDIKEISPVSGGDVNEAYRVETDTDTFFLLVQR
                     GRKESFYAAEIAGLNEFERAGIKAPRVIASGEVNGDAYLVMTYLEEGSSGSQRQLGQL
                     VAQLHSQQQEEGKFGFSLPYEGGDISFDNHWQDDWCTIFVDKRMDHLKDELLNRGLWD
                     ANDIKVYDKVRRQIVAELEKHQSKPSLLHGDLWGGNYMFLQDGRPALFDPAPLYGDRE
                     FDIGITTVFGGFTSEFYDAYNKHYPLAKGASYRLEFYRLYLLMVHLLKFGEMYRDSVA
                     HSMDKILQDTTG"
     gene            19078..20142
                     /locus_tag="O6Y56_001000"
     CDS             19078..20142
                     /locus_tag="O6Y56_001000"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDB5574279.1"
                     /translation="MYKLIKPFLFKIEPEKAHGLTIDALKTLQKFPVLFPVVDKLFTY
                     KNPTLSQTIQGNTYDNPIGLAAGFDKSCEVPKALEHLGFGALELGGITPKPQPGNPQP
                     RMFRLLEDDALINRMGFNNIGMNKALSHLRKNAYQVPVGINVGVNKMTPYEARYQDYI
                     KVIDTFKHDVSFFTVNISSPNTENLQNFHDKDEFSMLCQALTTFKKQHDVTVPIYLKL
                     TSDMDFDGLKALLPAITETFDGIILANTTRQRDGLTSANKVEEGGLSGRPLFERNLKL
                     IKYAYQQTNGEFLIIGTGGVFSTEDAIKMMRHGASLIQIYSSLVIEGPGLTKKMNKGI
                     ARYLKDHHFDNVSDIIGLDA"
     gene            20297..20572
                     /locus_tag="O6Y56_001001"
     CDS             20297..20572
                     /locus_tag="O6Y56_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574280.1"
                     /translation="MTKETDNKKTVATSDNKDTQQQNQPEEDERQGLNGYRKTDLDLE
                     IEQELREMMKTGENETKNDYKKFKVFSLISTLVIVILAIIRFVHKMM"
     gene            complement(20758..21480)
                     /locus_tag="O6Y56_001002"
     CDS             complement(20758..21480)
                     /locus_tag="O6Y56_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDB5574281.1"
                     /translation="MINAEPIISKMKNQKINYDKVLKKLIGQWEREAIRPKILLHSCC
                     APCSTYTLEFLTQYADIAIYFANSNIHPKNEYLRRAKVQEQFVEDFNRKTGANVKYIE
                     APYEPHKFVKMVKDKELADEKEGGLRCTACFEMRLDIVAKAAVEHGYDYFGSAITLSP
                     KKNAQLINELGMDVQKIYDVNYLPSDFKKSKGYERSIEMCNDYNIFRQCYCGCVFAAM
                     QQGIDFKTVNKEAKAFLEQYPD"
     gene            21834..22283
                     /locus_tag="O6Y56_001003"
     CDS             21834..22283
                     /locus_tag="O6Y56_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase/bleomycin resistance/extradiol
                     dioxygenase family protein"
                     /protein_id="HDB5574282.1"
                     /translation="MTALFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGM
                     TKEEAQEATMHAEFEVLGVKVLCSDSFGRADKINNGISFLIDYDVNNKEDADKVEAFY
                     EQIKDHSSIEIELPFADQFWGGKMGVFTDKYGVRWMLHGQDYTAIQQ"
     gene            complement(22364..22951)
                     /locus_tag="O6Y56_001004"
     CDS             complement(22364..22951)
                     /locus_tag="O6Y56_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDB5574283.1"
                     /translation="MTIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRS
                     TFYTHYYDKYDLLEKLEDQQLEEIRDFIHDEKLNGAVKLSTDNIHQIMTVLIEMIEKD
                     IAFYQLMFRMGKDSNIHEKLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSGAGLSLI
                     RHWVEDSNRIDKVDLIRHFNTIVNQGPATIIKNIQ"
     gene            complement(22929..23037)
                     /locus_tag="O6Y56_001005"
                     /pseudo
     CDS             complement(22929..23037)
                     /locus_tag="O6Y56_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501367.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            23094..24776
                     /locus_tag="O6Y56_001006"
     CDS             23094..24776
                     /locus_tag="O6Y56_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HDB5574284.1"
                     /translation="MNQHLLGNPKLTVTHVNEVKAGINHIVVDSVQYGNQEMIMEKDV
                     TVEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGPLWPTLGAIPTSSF
                     TPEESPDPGFWVPNDYVVVKVALRGSDKSKGVLSPWSKREAEDYYEVIEWAANQSWSN
                     GNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLNDMYREVTFHGGIPDTGFYRFWT
                     QGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQVPLSQIKTPLLTCASWSTQGLHNR
                     GSFEGFKQAASEEKWLYVHGRKEWESYYARENLERQKSFFDFYLKEENNDWKDTPHVI
                     YEVRDQFYKGEFKSASAFPLPNTEYTPLYLNAENHTLNHAKISSAHVAQYDSEDKRQD
                     VSFKYTFDKDTELVGNMNLKLWVSTTDSDDMDLFAGIKKLDRRGNEVNFPDFNHIENG
                     QVATGWLRVSHRELDQEKSTIAQPWHKHETELKLSQDEIVPVEIELLPSGTLFKQGET
                     LEVVVKGSEIVIGNSTPGMKTRYEHEETVNKGMHMIYTGGKYDSQLIIPIVN"
     gene            complement(24885..25520)
                     /locus_tag="O6Y56_001007"
     CDS             complement(24885..25520)
                     /locus_tag="O6Y56_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002955208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HDB5574285.1"
                     /translation="MKKVISLFVAILSVLIFTDNANAENNKPEGVNENSNLIPVRQPD
                     ANYPGPVSDIARVKKLDNLIDGTKDPDVIKQLKDDNEVPNNAVKAKDSKIVSDCRHLL
                     KHPDNLIDGTKDPNVINQLKNANGTTNNSAVNPSIKANDIHTKSNKQMAKQQSIHLDS
                     KSKSVHKQQLKELPKTGVNNESNTAIMALFIGLILLVVSLVTRFIKLNSYQ"
     gene            complement(25536..26585)
                     /locus_tag="O6Y56_001008"
     CDS             complement(25536..26585)
                     /locus_tag="O6Y56_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HDB5574286.1"
                     /translation="MILLVVIVSSYYGESFVLADNNPIVNSENGSDNNFESGTIERNQ
                     NELYEVGDYSTPLTERVFGKDQRIVVNNILQRPYKQTVLLNMTFSNNRVYKGTGTMIG
                     KDIVLTAAHNVYSKDDKGWAKKIDVYAGVYGQTYTIGKAFSHKFFVSKSWINNAPTKE
                     DIAIIKLNNNLGNKTGYLTLNTRISKGENIEISGFPGDKSDNRQYKGKGKLESFDENE
                     MYYTVDTFSGQSGSAIRDSKNNIIGVHAYGRYNHNSGVRINDLKLDYINYWIGKYRSH
                     PYNKKVKVIKSKYIYWKNIEITKKGDNKLIKKDKAYTAKLYYNIPNGYKYYSLYDEKN
                     RWMGYFNSNDIKVVK"
BASE COUNT         8781 a         4782 c         4021 g         9026 t
ORIGIN      
        1 taatgtaatc tgttcctaac aaagcatcat tgaatgtaat ataccaatta gaatgtttac
       61 aacacttttt ctgcaccgtt aacatgggat ttgaaaataa aaaagcacta aacttttaat
      121 gaaatacatc ctttttgata ataaaaatca gaagtaatgt aatatttcaa aagtttagtg
      181 catcaagtta tttcttattt gtagcatgtg tttccattgt ttttacaatc aaatcagtca
      241 atgctttact acctgcatat tctaaatgta tgccgtcata tgcaaagtac tccggatgac
      301 cttcagaagc tttataccaa tctacaaggt gtacattagg acgcttttca gctgcctcat
      361 aaattaattt atttattcta ccttcataat ctctaggtac tctaatagaa actaaatata
      421 tgtctgcttt tccaaaacta tccaatagtt catttaattg atctttcgta aatgccccat
      481 ttgtaccaag ctctactaca actttttgac cttttttagc atagtcttta tattgcgatt
      541 tcacaattgg tgtagcatca acgagttgcc gtccaacttt accatcaatt tgtgcatttg
      601 gtattttctt agtaaagaca ttaccaatat ccaccataac cgaatcacca attaataacg
      661 gtgatgactt tttaatatcc tctttactat tcgctgtctg cttatcctct tgcttatctt
      721 ttttaacgac ctttttcttc gttgttttaa attcagtctt cttctctttc ttctcagctt
      781 catgttgttt accaagtgca tcaaattgcc cactgagcac gatgatagat ggaatcaata
      841 ataagataac taacgcagtt ctagcaaatt gactcttctt tttaggtaaa aatgcaaaag
      901 ctttaaatcc ttttttacgt ataggtgttt caataaagcg atacgaaatt tcagccatta
      961 acgctgttaa caaaatttct ataatataaa cgtataccgg tatttgtcct tgtacgtaat
     1021 aactgttcac aaaaacaatg ataggataat gccataaata taagctatat gatcgtttac
     1081 ctataattag caaaggtttc atacttaaaa atttagcaaa taaactagaa ggatgtaccg
     1141 caatcgcaat aatgaataaa gttgcaaatg atataatgta aaatcctcca ttatatatcc
     1201 attgatcttg gtctccaact ataaagaaca aagtcattag caccgcaaaa ccagatatcc
     1261 ctataatatc taatgatacg acaatctttt tagaaatatc ttttttcaaa gcaaacggtg
     1321 gccaaataaa tgctaatata caaccaagca ataaagtttg cagtcgtgta tctgtcccaa
     1381 aatacacacg tgaattatct ccagtgataa aatgaatcac tatcataagt cctaaagaaa
     1441 tcaacgatac aataaatagc gtttgaataa tatttctcgg tttaaatcta tgtaataaga
     1501 acgtgataac caatgggaaa agcaagtaaa attgttcttc aatggctaaa gaccataaat
     1561 gtttgagtgg ttcaatagca aattggttaa aataatctac attctgtgaa atgtaccacc
     1621 agtttgaaac atagaatata gctgcaatag catctcgttt catttgtata atcaattccg
     1681 gtttaaatat cagtgtgaac gtaagcacga cacagattaa aaataacact gccggaatga
     1741 gtcgtttcaa tcgtcgcttc caaaactcta gcaaatcgat tttttgcgtc cgataatact
     1801 cacttatcaa caaacttgtt attaaataac ctgaaataac gaagaatgta tctactccta
     1861 aaaagccccc acttaaccat tgtgcattca agtgataaat aatgattcct ataactgcga
     1921 atgccctcaa tccatctaat ccgggtaagt atcgcgggga atacattttt tctaaacgtt
     1981 taaagtcttt tgtatccatg ttaataaacg ccccatttat ttttctctat tttgtagcat
     2041 atcacaatat ttttgaaaat aaaatattgc aatgattttc attaattgat ttaaccctta
     2101 attaagatag ttttaaattt tttattaagt agaaaacaat tattacagtt aatttcatta
     2161 ctgcaaacca catataaatt tgtcgatttt actacataac atagattatc atagattctt
     2221 gaatttttag caaaataact gttattttca ttatattttt acaaaaaaag gttcgtttta
     2281 tattttatgc atcttactgt aacagaatca ttaagatatg ctgttcgaat ttacttttaa
     2341 aaagttgaat aaactgatat gtattgaaaa taaagtgaaa tgcagcctat cctctaattt
     2401 aaaccaaacg atatatcacg tcagccttta tatttaaacg ctatgtgtca cttttaaaat
     2461 gaatattact aagattgtca tatcaattat tcattgcatc gaattaatct tttaaatttc
     2521 tataataaaa cctattatct acatctaatt taggaaaact acttggtaaa tctcctcgct
     2581 taatttcacg gaagccatta ttagaataaa aatactgtgc actaataaat ttatcaattg
     2641 ttcctaaata aataccatcg atattttgtt ctttacatgt cattataact ttatctaaaa
     2701 gttttttacc tatttttaaa ttcctataac cttcatcaac aaacattttt ttaagtgcag
     2761 acatattatt atctagtcta atcaaaccta tagtaccaac aatattttga tgattgttta
     2821 ttgcaagcca aaattgacct ccgctattca aataattatg ttcgatgttt tccaaatcag
     2881 gttgatcatt cctatcaata tttatattaa attcattttt ttgaatcgat aaaataaatt
     2941 tgattaactc ttccttataa gacctattat attcaattat gtttatagcc atttttatct
     3001 cctttttcat ttaatttaat cataaaatgc gcgtttagtt tgtatctagt gtactcagta
     3061 catcctcaaa tgaagtttca ttccacttgg cacttaataa agacaagtat tttagcagta
     3121 atacaataaa gtccaataaa tttccctaac ttcaatatcc actttttaag aaatgtattt
     3181 ttaattaata aaaaaactct tcccaatttc tatgggaaga gctatatatt taatgtctaa
     3241 acattacttt tattaattat gaaggaatta gaatccccaa gcgcttaaac cttgtgcttt
     3301 gtatgcttta acagctgcgt tgatttgttg gtcaacagtg tttgttggac cccaacctgg
     3361 catagtttgg aataaacctg aagcacctga tgggttgtaa gcatttactt gaccatttga
     3421 ttcacgagcg atgattgcag cccatgtaga agctgaaaca ccagtacgtt gagccatgat
     3481 ttgagctgct gatgaaccag tagcacctgc agtattacca ttgcttaatc tcactgaact
     3541 tgaagtagtt gaagtgctgt agttatggta agttggagct gaaacagctt caacgtttga
     3601 gttacttgat tgtgcattgt agcttactga ttgtacattt gaaccttggt tgtatgaagt
     3661 agtgtagtct gcacctgcaa cgtttgagaa accagcagtt tgaccattag ctgcttcata
     3721 gctccatgac catgtagtac catttgaagt gaagttatat tggaaaccat cttttacaaa
     3781 gtggatgtca tatgcaccat ctttgattgg agctgcattt aattgatctt ggtgattgtg
     3841 tgctaagtca actaagtgtg cttgatcaac gttcatttca gcagcgtgtg cttcatgtcc
     3901 tgtgcttgct gcgtaacctg ttacacctaa tgccactgct aatgatgatg ccataattgt
     3961 ctttttcata gtaaaaaatc ctccagtaat aattgtaagt ttatgttttt agtaattata
     4021 ttttgaattt gaaatgtcgt agtgcaagtt taaattgtct tttatttctt tcaacggtaa
     4081 tcactatatc acaaaaaacc agccagtaaa ttacactttc tttacaaaac attacaatat
     4141 caagttttat ttgtaatgtt gaaatatggc tgttttatac tgcaatgtga aatatgtacc
     4201 ttttagaatc caatcaaccc ttgaaatagt ctttaacaca taagattttt actatgttta
     4261 gctcaactat tacaactttc gtaatattac agattgtatt tttgttacat agctgtaata
     4321 tatctgacat gtaacttctc ttattttcgt acattaaacg caattaaaaa gcaatcaaca
     4381 catatgattc tgcaaatgtg ttgattgcta ttattgttat atattcaaag ttactatgca
     4441 cacatctttt gtggattgac ttatctttta taagcacaaa taaactacag ctcaattata
     4501 ttgttaaact ttattctctc aattcacaat aacattaaat aatttttggt ctcatatttt
     4561 caaaaaacat actgtcctta tcccatgaat ttaaaaatat cattagtata taaacgaaac
     4621 actttacgat aaatgatatc tgcaagccaa gctgttacaa atggtacaac aaagaacgct
     4681 actacaatta gtaagacact caaccaagca gaatcaacct ccataaattt aaatgcatta
     4741 atcggtccta ccatccctat aaaaccaaat ccagctgact ctttcgttcc atgaatacct
     4801 actaatgctg ataccaaacc tgatacaatg gctgtcgtca atattggtaa cataagaatt
     4861 ggatatttca ccatgttagg tatcatcatt ttaacacctc caaagaagac ggataacggc
     4921 acccctaaac gattcacttt acttgtacca attatcaata ctgcttcagt cgcggaaata
     4981 ccaattgacg ctgacccagc tgctaaacct gtaataccta tcgcaaaggc aatggccaca
     5041 gttgatagtg gagaaataat aataagacta aataccattg aaatcaaaat actcatgaca
     5101 attggttgta attctgtaaa accattaacc atattaccga tggctgttgt aatcattttc
     5161 gtatacggca atattaaaac accaattgca cctgaaatac cgccaacaac tgttgggaat
     5221 acaatcaatg ccatactacc tacgcgatgt tgaataagta aaatgaacaa cactgcaatc
     5281 gctgctgtaa tcattgtatt aattaaatca ccaatacccg taatcatcca agcaccattt
     5341 ttaaactgcg ctgcaccgct tcctacatat gctgcacttg ccacaacagc aattgctaat
     5401 ggcgataggt caaatttcat ggcaaccaat gcaccaatca aagcaggtac tgtaaattga
     5461 attgcaacga caacgcctaa taacgtttta aaaatcggat gataatccat aaagtattta
     5521 aaaatttctc caagtatcgc attaggaact aaacccgcaa caatacctat ggcgacacct
     5581 gataaaactc taaatataaa atctttgggt gtaattgttt taattgatgt cataatatca
     5641 tccttccatt tatgtatata catctttatg caaataataa agagccttaa gttataagct
     5701 gccactagct taaattctaa gatgtgcatg ccgatgttgt tatatttagg ctagcagtat
     5761 catctataac tcaagactat gaaaaatagt atatcacaaa attctgaatt tttagataaa
     5821 gaaattggca atttttcaaa catattgtta caatacactt ttattttatc ttcattttta
     5881 aaatccatta atataataga agaaagacat tcaaatgctt accaaaaagg tacattattt
     5941 gttaggagcg tatcagcact tacatatcat caacacaatt gacaatataa tagaagatac
     6001 tgataataag tgttaaaaca acagatgtta ggtagtgaac aaatgatgga aagtaaatcc
     6061 atagatccaa gaatcgttag aaccaaacaa ttgcttgtcg atgcttttct taaaatttct
     6121 agagaaaaga aattatctca aattacagtt aaagatatca ctgatattgc tacgctaaat
     6181 cgtgcaacat tttacgctca tttcactgat aaagaagacc tcctagacta cacattgtct
     6241 gtaaccattt taaaagactt gaatgataac ttgagcattt ctagtgtcat taatgaaaag
     6301 gtactgcgta atattttcat ttcaattgcg agttatatca aagatgctgc aaagtcttgc
     6361 gaattaaata gtgaagcatt ttgtaacaaa gcacatcaac gtattaataa tgaattagaa
     6421 gatatttttg cgattatgtt agaaaacagc tacccagagc atcaacgaga tatcattgta
     6481 aatagtggga gttttttagc agctggtata tcaggcttag cattacattg gtttaacacg
     6541 agccaagaga cagccgatgt gtttatcgat cgcaaccttc catttttaat tcatcatata
     6601 gcacattttt aattaaactt ggtatttagt catgcatcta gaaatcacta tgtgacttag
     6661 gttcatactt gtacacacaa taaaatttaa cgtattacga ttgattagcc gtgtctagga
     6721 cataaatcaa cgtcctatac tctacaatgt catattggca gtcgttaact gaatgaaaat
     6781 aagcttgtca ttaaaacata tagattttag tgacaagcat ttttgttttt gcgtacttaa
     6841 acaacacttc aggcaatatg ttgtttaggc aacaaatgat atgtgcgtgt ttattggcaa
     6901 acgtacgaca tagtagtata gtatgtctaa acaacacatg tcgtatagtt gatatgcgtt
     6961 gtttaaatac taagatagga gggattgacg tgagcgagac agatgaacct caggggtttg
     7021 aacacacgca taacatatta aatattaatc agaatagtca gagtctaatg acattcatta
     7081 caagtaaatt gaagtcgaag ttgaagcaac acataataat tgctcgtggt aaaaagcgaa
     7141 tcgactatcg actgtcgtat aacttttaca ctacgcatta tgataatgta gaaatcaaga
     7201 aaatcgactg tgaatatacc tatgctatgc ccattgcaat tttaataaga cacatgatgt
     7261 cattcgacaa tgctcatttc tttgctcagc tacgtcatcc tgtcttataa aacaacattg
     7321 cagacatgta tatcaaacga cacttcaata acatcacttt gccatcatac tactattaaa
     7381 atcgtgtctc aaacccctta ttttaattcc aaaaatctgc tggtcaaaag accgagaaac
     7441 taaaaacatt actgaatgtg ttgataaatt accttataga aataatctca aaatatatca
     7501 acacttgatt ctaaggagga tatgacaata tgaaaatttt agatagaatt aatgaacttg
     7561 caaataaaga aaaagtacaa ccacttactg tagctgaaaa acaagaacaa catgcattgc
     7621 gccaagacta cttaagcatg atccgaggac aagtattaac aacattttcc acaataaaag
     7681 tggttgatcc aatcggtcaa gatgtcacac cagataaagt ttatgatctt cgccaacaat
     7741 acggttatat tcaaaattaa tatttgctca cgaggtattg cacttaaggt gccaactgac
     7801 ctcataaaca aagcccatac tgattgaaga cactaatgtg tcgcaccacg tctcttacga
     7861 catgtgcaca ttacgctcca tctctgtatg ggctttttat ttattctttt gagaatttca
     7921 ttttagcaga ctaaaaaatt aaaatggtgt ccatcaagat ctttgaacat tgcaccataa
     7981 aacccttggc ttactgttgg ttcttgaacg actgtgccac ccgcttcttt cactttattc
     8041 accaactggt caacttcttc atttgtattc acacctaaag aaatcatcac ttcatttggt
     8101 tcagtattaa ggctttgctg acttacattt tgaaaatgct tgttttctat taaaattacg
     8161 gttgtttgac ctatttgaat gccgaccatt ttatctaaca tttgtgggtt tctatttatt
     8221 ttaaatccta acgctttata aaactgtgcg ctcttttcta aatcttgcac atgtaaatta
     8281 aaccacattg attgaatcat gattgcaccc cattcattac ttattatagt cttggacttt
     8341 aagccaatca cttaatgata atcttgttgg atttatttca gccattaatt caaagtctac
     8401 ttcataacct ttttcttcca accattgctt ttctgcaaca ccactaacaa attctccttc
     8461 tataacagtc gatttacctg tcacttcact aaaaattgtt gctgcttcac ttaatgtaac
     8521 ttcatcggaa ccaatctcta ttgattgatg cgtaaagctt tgtggatgtg caaaaatata
     8581 cgatgcaatt ttagctatat caatagaaga aatcattgtg aattttatat tcggattaat
     8641 aaattctggt aatgtaatac gttcatcttc gactttagca atgcgtaaaa aattatccat
     8701 aaagaatgat ggtttgataa ttgttgcatt tatattagat tccattaatc tattttctat
     8761 ttttgctagt acttcaaagt gtgggccagt tcgatttcga ttaacccctc ccgcagtact
     8821 atacacaata tgttgaatat tttcttgctc agctatttca attatcttca taccttgtct
     8881 taattcttcg ttaacatcat ctttaacgat tggctgaata ctgtataagc catacttccc
     8941 tttcatcgct gattgcaaac taacattatc actcagatca ccttcaacga ttgataaatg
     9001 cggatgtcct atgtctgaaa gtttacgatt attcttattt ctagttaatg cacttacata
     9061 ccatccatcc tctaacaact gttttacaac tgcattacct tgcttccctg ttgcgcctat
     9121 tactaaaata tctttcattt tagatccact ccccttttat cttaaaaacc aatagtcctc
     9181 tttttcacct tttaaatacg tatatggttc tggtgtttgt ccatttcctt taatattgtc
     9241 gtttattaca tctctgacat cccatactaa atgaataaat cgttgtaatt gatgactaaa
     9301 aatgcctagt ggcgctgtca tagctaatac tttttccaca tcttctgtag tgacattcag
     9361 tttttcagca atcatttgaa ccgataaggt agattcttca aaatgtgctt gcaattcttc
     9421 agctgtgatg cgtctttgct ctttatttaa agacattatc aatactcttt tcttttatga
     9481 tatttaatag ttattgcaaa ttcattgcta actttcttaa cacgttttat aataaacgga
     9541 gagttatccg tttgtcaatt ttagagaact ataagtaggt ggaacaatgc gaaaggatgc
     9601 catagagaat aggcaacgaa ttgaagaaat agcgcacaaa ctttttgatg aagaaggcgt
     9661 tgaaaacatt agtatgaatc gtattgctaa agaactaggt atcggtatgg ggacactata
     9721 tcgacatttt aaagataaaa gcgatttatg cttctacgtc atacaaagag atcttaatac
     9781 ttttataact agatttaaac aaattaagga tgactatcat tctaattatg aggttatgaa
     9841 agtatcttta gattatcttt tacaatttaa aatcgataat aaaacacttc ttcattgtat
     9901 tgaagctggc aacaataaat tacgttttta ccaaagcgca ttttatcaag aattatttga
     9961 tttttattat gatttattta aaagcgatga tgacattttc acaaagttca aaactgatat
    10021 gctattgcaa tcattatcaa ctagtgtatt tgccttccaa atagaacatc gccatatttc
    10081 aattgaagcg tacagaaatt atttattaaa catttattta gatgaggtgg aacgtaatga
    10141 ctaaaattgt gttaatcaca ggaggcaata aagggttagg ctatgcaagt gcagaggcac
    10201 ttaaagcatt gggttacaaa gtttatatag gttctcgtaa tgacgtaaga ggacaacaag
    10261 catcacaaaa attaggtgtt cattatgtac agttagatgt tacaagtgac tactcagtca
    10321 aaaatgctta taacatgatt gctgaaaaag aaggtcgtct tgatatcctc attaacaatg
    10381 caggtatatc aggtcaattt tcagcacctt ccaaattgac gcctcgtgac gttgaagaag
    10441 tatatcaaac gaatgtattt ggtatcgttc gaatgatgaa cacattcgtc cctctcttag
    10501 aaaaatctga acaacctgtt gtcgtcaacg tatcaagtgg tttaggttca tttggaatgg
    10561 ttacaaaccc cgaaacagct gaatctaaag tgaattcatt agcttattgt tcgtctaaat
    10621 cggcagtaac aatgctaaca ttacaatacg ctaaaggatt acctaacatg caaatcaatg
    10681 ctgctgaccc aggcgctacc aatactgatt tagttggtga ttttagtaat aattccaaac
    10741 atgtttctga aggaatcaag ccaatcattc aattagcaac gattggtgta gatggcccaa
    10801 caggtacatt tattaatggc gatggagaaa tgccttggta gatcaatttt atgttacaaa
    10861 cattgaaatt agaggtatat aaaaaatgtt tctgcaatag atgcaataaa catacaaatt
    10921 actttggagg cgaatcaaat gaaaagtatc acgtttgaag aacattatgt cattgaagat
    10981 attcaaaaag aaacgatgaa tgcgatgtca gcagatccta aaggtgtacc gatgaaaata
    11041 atgttagaag gccttgaaaa aaagacaggt tttacaaatg ccgacgaatt atcacatcat
    11101 gatgaacgta tccaatttat gaataatcaa gacgttcaaa ttcaagtctt atcttatgga
    11161 aatgggtctc cttcaaattt agttggtcag aaagccattg aattatgtca aaaagcaaat
    11221 gatcaattgg caaactatat tgcacaatat cccaatcgct ttgtaggctt tgcaacttta
    11281 cctatcaatg agcctgaagc cgcagcgcga gaattcgaac gttgcatcaa tgatttagga
    11341 ttcaaaggtg cgctcattat gggacgtgca caagatggtt ttcttgatca agacaaatat
    11401 gacattattt tcaaaacagc tgaaaattta gacgtaccga tttatctaca tcccgcgcca
    11461 gttaatagtg acatttatca atcatactat aaaggaaatt atcctgaagt aactgcggca
    11521 acatttgctt gttttggtta tggttggcac attgatgtcg gtattcatgc aatacatcta
    11581 gtattatctg gcatttttga tcgttatcca aagttaaata tgattattgg acattggggt
    11641 gagtttatcc ccttcttctt agaacgtatg gatgaagctt tattcgctga acatttgaac
    11701 caccctgtaa gctattactt taaaaataat ttttatatca caccgagtgg catgttaacg
    11761 aagccacagt ttgatttagt caagaaagaa gtaggtattg atagaattct ttatgctgct
    11821 gattatccat atattgagcc tgaaaaatta ggtgtgtttt tagatgaact gggtttaaca
    11881 gatgaagaaa aagagaaaat aagttataca aatggtgcta aattattagg tttatcatct
    11941 aacaattaac aaatggaggt cattgaatat ggagatttta gaattacaag gcgctaaatt
    12001 acgataccac caagtcggac aaggacccgt gctcatcttt attcctggtg caaacggtac
    12061 cggagacatt tttctgcctc ttgcagaaca gttaaaagac cattttactg ttgtagccgt
    12121 tgatcgtcgt gattatggag aaagcgagtt aactgaacca ctccctgatt ccgcttcaaa
    12181 tcctgacagt gattatcgtg tcaaacgcga cgcacaggac attgccgaac ttgcaaagtc
    12241 attaagtgat gaacctgtct atatattagg ttcaagttca ggttcaatcg ttgcgatgca
    12301 tgtgttaaaa gattaccctg aagtcgttaa aaagattgca tttcatgaac caccaattaa
    12361 cacattttta ccagacagta cttattggaa agataaaaat gatgacattg tgcatcaaat
    12421 tttaacagaa ggcttagaaa aaggcatgaa aacatttggc gaaacattaa atatcgcacc
    12481 aattgatgca aaaatgatgt ctcaacctgc tgatactgaa gaaggacgta tagaacagta
    12541 caaacgtacg atgttctggt cagaatttga aattagacaa tatacgcatt cagatattac
    12601 tttggatgat ttcacaaaat acagcgataa aatcacccta ctaaatggga cagattctag
    12661 aggatccttc ccacaagatg ttaactttta tataaataaa gaaactggca tacctattgt
    12721 agatattcca ggtggtcact taggttatat tcaaaaacct gaagactttg ctgacgtatt
    12781 attaaatatg tggggttaat ctatcgttct ctaataaaac agcttggaca gttttcaaat
    12841 tatatttgat ggctgaccaa gcttattttt gtttacgttt aaacgttcaa atcaactcgt
    12901 tattatacat gaaagtatgt taaccattct cttccactga aaacactact gttccaaaca
    12961 ttgatagtct tcttttgaaa taccctttcc gataagcacc aaatattctg gcactttttt
    13021 tgaaaatgct acaggtgtta attcatattg gccttgtgta aattgaatga gatacgtatg
    13081 tgtggtgtct tcaaatgtca taaacccttt caacctataa atatgagacg gaaggcatgc
    13141 taaacgtttt ataaactgtg ctttagtaca tttgactggt gattgcacaa attgatgatt
    13201 aatcatttga tgtaacgact tatgtttatc gtcagaagta gctgtcattt gtctaactga
    13261 tattggcaaa gtgacgctgc catgcatacc gacttgtata tctacctctg ggttaataac
    13321 ttctaaatct ttcaatagtt tgctcgtcgt ttcaacatct gctgaatcta ttttattaac
    13381 aaataagaca gaacaatatg ctaattgctc ataaaataag ccttggatgt ctttagggaa
    13441 tgatttaatg tgtttataca tgcttgcgtc tattacacca atcatatgtg taattgttgt
    13501 aaacggagct aaaataggcg ttaaacaagc atctaagaca gagaccggtt ctgcaatccc
    13561 actacattca ataaatacaa tgtctggttg ctcttttaaa tataattgat gtaactgttc
    13621 tgatacatct gctttcattg cacaacagat acacccctct gtcagttcac ttaaaggtat
    13681 gtcttcagat actaaggcac catcaacact cattttgcca aattcattca tgataactgc
    13741 cggtttcagc gactccttta atgattcagc gagcaaatga tttaagacag tcgttttacc
    13801 gccacctaaa aacccaccta taataactat tttcatctgc gactctcctc ttatacttca
    13861 tatgaataga atattccaag atagctttcc tatttactga catgactcta tattcagtta
    13921 tagttcattt cttttttaaa taatcagcat tactatttta acaatgatgc ctacaccaat
    13981 aactaaagac aaggatgtca ccatttgctt tccaattaat tttagtgctg actgaccacc
    14041 taaatgcttc aaaagcatcg tcattgtgac cgagcacgct gtaaatgttg aactaaaaaa
    14101 cacaagtagt agtaactgtg ttgctgtcat tccttgtaat aaggcgccct gatgcaaatt
    14161 aaacaagagc atgccgtctt ttcgaatcat tgaaaataaa atccctggtg acaattctga
    14221 cgagatgcct aataacgata atataggtgt aaatatttgt gataaaacat tcaaaattgg
    14281 cgttagtgat aaaatactaa caataagaca gattgtgata aaaataggta gcgcttgaac
    14341 gataaacatt tgtatatttt gccacatttg tagcaacatt tgacgtatat ttggcacatg
    14401 taattgccta tcataaggta gcggaacgct aagttgttga tcattctttt tcaaccatat
    14461 cctattatgt aagatgccac ctaaaagcac taatattaag tacggcataa atagccatga
    14521 ctttccagct acactaaaaa tagataatgt cgcacctatt tgataactac aagaactacc
    14581 aaagcttatt aaactcatac actgtgtctt cgtgcaggta tggcattggt gtgctgcttg
    14641 tgaaatagct gctgcattac atccaaatcc ttctaatagt ggcacgatat cattaccttg
    14701 taatcctatc cgtaacattg aaggttcaat tgcccatatc atccatgatt taagtcctgt
    14761 ttgatcaatt acagcagttg ataagctgat caatattacg accggcaatg cccatacgag
    14821 cgaatatgtt ccaagtgata gcacaccata atcaccaaat aatatatgct gtaatatatc
    14881 ttgattgagc aatgttgttt gagttaaata ttctatccat gctgatacat actgattttg
    14941 aaaccaatct gaaaattgat aagcgatacc gattggtaat gcaaacatta aaaatatcaa
    15001 caaccaggct aaaaatgtcg cacttatttt aggtcttaaa tgtcgtcgct catgttgaaa
    15061 tagtgtcaat tgttctatca catgttcgct cgctataggc gaagaaacta cactttctgc
    15121 caatgaaata tctaatttct gttttatgat taataatctt aatttcgctt tttctgttgc
    15181 ggtaagttta tccgcatgac taataaccaa ataatgaggt tcattaggta tgggcgtata
    15241 atgccccgtt ctcatatcat atttcacttc taacatgtgc atgacacttc acaacatgaa
    15301 taatcatcta aatacatttg atttttttgg taattttcaa tgacatcttg tttagctggt
    15361 aagccttccc gctgtgttaa aagatgtgca agtactgcaa atcgcgctct gaatttatag
    15421 atatagcata atttggcatt atcattttca actgttgcac caatcataaa aatattcgga
    15481 taacgtgtcg attcatcatg tgttgttaat ttaatatctt gatttgttgt cgcaaataat
    15541 tgttgaacga ttggattttt tgttgcatca aagccagttg ctagtattgg ttcatgaggc
    15601 gtatgcacac tttgtccgct atcaaaactg atatgatact gtccgttgtt aaaatcaata
    15661 tctttaactg tataatgtac attcatttca atgcgagcac cttgcttaat gacattacct
    15721 agtcgctgac gtgtataagg tgacaatcta acactaggat cagcatccgg atcatttaaa
    15781 ccggttgtgc tagtataaag tgcgatgtca gagccatttt ttgcaagttg atatgcagca
    15841 tcaaaaccac tttcattacc tccgataacc acatattgtc ccttattaaa gttatcaaag
    15901 tcttcaattt cactataatg aataccatat ttaaatggct ttttagggaa attataatca
    15961 cctgttgcga caaagatata atccgcgtga tatgtctctg ttgtcgttgc aatcgtataa
    16021 tatgcatcat ctacagatat atttgtgaca actgtatttt caaaaatatt cagctcgtaa
    16081 tggttggcaa ccacttgtaa atattcagca tatgtttctc cggaaatatg ttcttcatta
    16141 aatgtaaatg ctggcgaagt atccatggaa attgcattca tatcaggcat gccaaatcca
    16201 ttagacgtaa atgatggcgt aatcgtacgg gtcgatttcg gccaatgttt aaatgaatgg
    16261 cctactgttc ctttttctaa aataatgaca tctgttatac cgaaatcttt taaggtaatg
    16321 gccataccta tacctgcagc accggcaccg ataatagcca ctttatgatg ttgcatatta
    16381 acactccctc aatgatctat ttcaagttat tgtttttgat tttaaatcgt aataattacg
    16441 atttataaag tatagaccta tccttgagaa atttcaatat taaaagaaaa acttccgtta
    16501 ttgtagagaa ttcatctaca tttcggaagt tggtatgtgt cttttttatt aaatttaaag
    16561 atgctacggt tagttcaaat gattgcgata gacattcaat ggttgtcatc cagcctcagt
    16621 acttggagat aacattttgg cggtgagaca taaatcatat ttttacaaaa tttatttcgt
    16681 cgtcccacca caataaagaa aaagtatttc tttattgtgg tgtaacttct ccacgttgaa
    16741 tttcactatc caaattttgt ttcatattat caaacaactc ttgaaatcta acctcatctt
    16801 gatcagaata acctttaaaa ataactgaat ctatattttc ctcgttaaaa taataaattt
    16861 catcttccac aacaccaatc ggatatttac atgcagaata gtcaaacata tacttttgat
    16921 tttcaatttc tacaattggt cctctattaa taatcattaa cttttgcgaa ccttctttta
    16981 aataaataat gcttcctatt gtttccattt attttcctcc tttgtcaccg tctcgatttc
    17041 gatattcctt cgcatttcca agtcaatcat ctcttcttcc gctttacgaa tgccatgttg
    17101 aatttgctgt tgctgctcgt ataacgcttc cgttgaacgt cgtttcgcaa aatgaaattc
    17161 atcgcggaac tgttccatac gactagccat attgctacta taataacgct cacttaaatg
    17221 ttgatataat tgatctatcg aatgattaag cgcatcactt tcatctatca atgctttaac
    17281 ctcttgcttt tcatcatata agtcatccat ttgcttatgt ttcgttgtga tcattttatt
    17341 gattccatca agtttattcg acatcatttc accacgtttt aatttttacc aatttcatta
    17401 ccaatcatta cgtcagtttg gtcaaaagcc tcaccaactt tttgtatatt atcgctcgca
    17461 gttcgtattg cttcagcaac agattgattc ttactaatca aatcatctat cacactatga
    17521 gcattattat ttccacttac tgttgtactt tcatctttat ccggtttcga aacattatta
    17581 catgtttcaa cagcgctttt aatagatgat gatgcactat tggtcttaaa aatatcactt
    17641 tgaactgtac tcatcattta cacctcttcc catttaaatt attttaaaat tattagaaac
    17701 tgtatcaata tatgatattc aaacattcaa taatacttaa atattgtttt gtgattatat
    17761 tcaaaattat tgtatcaata aatatgtatc attcctagaa ttttattgaa caaaaagtta
    17821 gaaaatcact tttattgtga ctcaatctta ttttgcatta tagaaattaa caatagagat
    17881 taaaatttta ttttccaaca ataaaaaagc acaaatattt ttattgaggc agctgaaggc
    17941 cttctcattg taaaaatatc tgtgcatatt attatcttaa tctaacttaa taactaacct
    18001 gttgtatctt gtaaaatctt atccatagaa tgcgcaacac tatcacggta catctcccca
    18061 aatttcaata aatgcaccat caataaatat aaacgataaa attcaagtct ataggatgca
    18121 ccttttgcga gtggataatg tttattatat gcatcataaa attcgctcgt aaaaccacca
    18181 aataccgttg taataccgat atcaaattct ctgtcaccat ataatggtgc tggatcaaat
    18241 aacgccggac gaccatcttg taagaacata taattaccac cccataggtc accatgtaat
    18301 aaagacggtt tactttgatg cttttctaat tccgccacaa tttgacgtcg cactttgtca
    18361 tatactttga tatcgttggc atcccatagc cctctattta gcaactcatc tttcaaatgg
    18421 tccatgcgct tgtcgacaaa aatggtacac caatcgtctt gccaatgatt atcaaaagaa
    18481 atatcgccac cttcataagg taatgagaag ccaaatttgc cttcttcttg ttgctgactg
    18541 tgtaattgag ctacgagttg ccctaattgg cgttgactcc ctgaagaccc ttcttctaaa
    18601 tacgtcatca ctaaatacgc atcaccgtta acctcgccac ttgcaattac tctaggtgcc
    18661 ttgatacctg cacgttcaaa ttcatttaaa cctgcaattt ctgcagcata gaatgattct
    18721 ttacgtccac gttgtacaag taagaaaaat gtatccgtat ccgtttcgac tcgatatgct
    18781 tcgtttacat cgccaccact cactggtgaa atctctttaa tatcttttaa aggtaaatgc
    18841 tctaaccatt gttcattcat acaaacacct tccattacgc ttactttata ctattatatt
    18901 gcctaattag gatgatttaa tctcaatttt atttatggta cttgcgtcaa ttttcaaaac
    18961 tttttagttt taactaggaa attatgtagg gaaatgctag tctattaaaa gaatatattt
    19021 cacatatatt aagttgagga tagtaagcct caaatataat gaaataggag catactcatg
    19081 tacaaattaa ttaaaccttt cttattcaaa atcgaacccg aaaaagcaca cggactaact
    19141 atcgatgcat taaaaacgtt acaaaaattt ccagttttat tcccagtcgt cgataaacta
    19201 tttacttata agaatccaac gttatcacaa acgatacaag gtaatacgta cgacaatcca
    19261 attggcttag cagctggttt cgacaaatct tgcgaagtac caaaagcatt ggaacacctt
    19321 ggattcggtg ctttagaatt aggtggtatc acacctaaac ctcaaccggg taaccctcaa
    19381 ccacgcatgt tcagattatt agaagatgat gccttgataa atcgtatggg cttcaataat
    19441 attggtatga acaaagcact cagtcatttg cgtaaaaatg cttatcaagt acctgttggt
    19501 atcaatgttg gtgtgaataa aatgacacct tatgaagcgc gttatcaaga ttatataaaa
    19561 gtcattgata cgtttaaaca cgacgtttca tttttcacag tcaatatcag ttctccaaat
    19621 actgaaaacc ttcaaaattt ccatgataaa gatgaatttt caatgttatg tcaagctttg
    19681 acaacattta aaaaacagca cgatgtaaca gtgccaattt acttaaaact aacgtctgat
    19741 atggatttcg atggcttaaa agcactatta ccagcgatta ctgagacatt tgacggtatc
    19801 atcttagcaa acacaacgcg acaacgagat ggtttaactt ctgctaataa agtcgaagaa
    19861 ggcggtttga gtggtcgtcc attatttgaa cgtaatttaa aattgattaa gtatgcttat
    19921 cagcaaacaa atggtgaatt tttaattata ggtacaggcg gcgtattcag tactgaagat
    19981 gcaatcaaaa tgatgcgtca cggtgcgtca cttattcaaa tttattcatc acttgttatt
    20041 gaagggccag gtttaactaa gaaaatgaac aaaggcatcg cacgttactt aaaagatcat
    20101 cattttgaca atgtcagtga tattatagga ctagatgcct aatccaacgt aggcaaataa
    20161 cactttaaaa cttgctgaat cgtcttatta aaattatgat ataactcaag aagatatatt
    20221 tatcaccatt tttcaaaata atggcttaaa tatcacatat cattaaatat agcgttttat
    20281 aacgggggcg tttgttatga ctaaagaaac agataataaa aaaacagtag cgacttctga
    20341 caacaaagac acacagcaac aaaatcaacc tgaagaagat gaacgtcaag gtttgaatgg
    20401 ttatcgtaaa acagatcttg atttagaaat cgagcaagag ctacgtgaaa tgatgaaaac
    20461 aggagaaaat gaaacgaaaa atgactacaa aaagtttaaa gtgttttcac ttatttcaac
    20521 acttgtcatt gtcattttag caattataag atttgttcat aaaatgatgt aattagagtg
    20581 agacattgtt ttatgtctca ggatccagtt attcattata gctacaatat ttacgattat
    20641 ataaataacc cgagatttta gtatgattca tttcactaaa gtctcgggtt tctatttgat
    20701 aatttttaat aggtcatggc ttgtatatgc gcctgccttt tatctcattt ccaatgatta
    20761 atctggatat tgttctaaaa atgctttcgc ttctttatta actgttttaa aatcaatacc
    20821 ttgttgcatc gctgcaaaga cacatccaca ataacactgc ctaaagatat tatagtcatt
    20881 acacatttct atggaacgct cataaccttt acttttctta aaatcacttg gcaaatagtt
    20941 tacatcgtat attttttgga catccatacc aagttcattg attaattgtg cgttcttttt
    21001 aggtgataac gtgattgcac tgccaaaata atcatagcca tgttctacag ctgctttcgc
    21061 tacaatatcc aaacgcattt caaaacaagc ggtacaacgt aaaccgcctt ctttttcatc
    21121 agctaattct ttatccttca ccattttcac aaacttatgc ggttcataag gtgcttcaat
    21181 atacttcaca ttcgcaccag tcttgcgatt aaaatcttcc acaaattgtt cttgcacttt
    21241 agcacgtcgt aagtactcat ttttcggatg aatatttgaa ttcgcgaaat aaattgcaat
    21301 gtctgcatat tgtgttaaaa actctaatgt atatgtacta caaggtgcac aacaactatg
    21361 caataagatt ttaggtctga ttgcttctct ttcccactgc ccgattaatt tcttcaacac
    21421 cttgtcataa ttaatttttt gatttttcat tttactgata ataggttcag cattaatcat
    21481 gatttaacct cccacattta atcattaact tctattatat atgattcata ttaaatgtca
    21541 gtcaaaaaag ttataaattc attttaatgc atttatattt tgaaaatccc ttatgtatct
    21601 aaaagcattt tttaaacttg aattttaaaa cactaaacaa cacatacgtc tctgtgtcat
    21661 tttcattttt tgtatgttat atatatgttt actttattta aatcaatttc atcttataaa
    21721 ttatcgtgta ttttacaaaa gattgacttc aattcatcgt aaaagttata cttttgccat
    21781 tttttaatgt aacatggtgt tagtaataaa aataatacat tgaggtgttt tacatgacag
    21841 cattattccc ttatatcgct tttgaaaatt caaaagaagc ccttgcatat tacgaagaag
    21901 tatttggtgc aactgacgtt aaacgtttag aagttggcga agaacaagcg tcacattttg
    21961 gtatgactaa ggaagaagcg caagaagcaa ctatgcatgc tgaatttgaa gtgcttggcg
    22021 taaaagtgct atgttctgat tcttttggtc gcgctgacaa aattaataat ggcatatcat
    22081 tcttaattga ttatgatgtt aacaataagg aagatgctga taaagttgaa gcattctatg
    22141 agcaaattaa agatcattct tcaattgaaa tagaattacc gtttgctgac caattctggg
    22201 gtggcaaaat gggcgtcttt accgataaat acggtgttcg ttggatgtta catggtcaag
    22261 actatactgc aatccaacaa taatgttatt gataaagata tcatttaata agcttatgtt
    22321 atatagcaag gcaagccact ctcgattcat ggcttgcctt attttattgt atatttttaa
    22381 ttatcgttgc tggcccttga ttgacaatcg tattaaaatg ccttattaag tcaactttgt
    22441 ctatacggtt tgaatcttct acccaatgtc ttatcaaaga caatcccgca cctgaaacat
    22501 aactcatgaa ataggaaaat ggtataccat taatttgatc attttcattt ttataacgtt
    22561 gtaaatgaca cataattaaa tcataaagtt tttcgtggat atttgaatct ttacccatac
    22621 gaaacatcaa ttgataaaat gcgatgtctt tttctatcat ttctattaaa acggtcataa
    22681 tttgatgtat gttatccgtg gataacttaa ctgctccatt taacttctca tcatgaatga
    22741 agtctcttat ttcctccaac tgctggtcct ctaatttttc aagcaaatca tatttatcat
    22801 aataatgcgt ataaaatgta ctacggttaa catcagctaa atctgcaatt tgttgcacag
    22861 taatctcttc taattggtgt tgatgtaaaa gttcaataaa tgcatttctc attgcaactt
    22921 gtgattttct aatacgtcga tctatagtca tttatatcaa gtcctcccca atgattataa
    22981 acaattataa acgttatgtt cattatccca caaatctcca agattgatga ttggcacaca
    23041 atgtttacct gtttaatata ggtgatacaa acaaacagaa aaaggtgata acaatgaacc
    23101 aacatttact aggaaatcca aaattaactg tcactcatgt caatgaagtg aaagccggta
    23161 ttaaccacat cgttgtcgac agtgttcaat atggaaatca agaaatgatt atggaaaaag
    23221 atgtcactgt ggaaatgcgc gatggcgaaa aattatatat taatattttc agaccaaata
    23281 aagatggcaa attccctgta gttatgtctg cagatactta tggtaaagat aataagccta
    23341 aaatcaccaa tatgggtccc ctttggccaa cattaggagc cattccgaca tctagtttta
    23401 cacctgaaga atcaccagac ccaggatttt gggtgccaaa tgattatgtt gtagttaaag
    23461 ttgcattacg cggtagtgac aaatcaaaag gcgtcttatc tccatggtca aaaagagaag
    23521 cggaagatta ttacgaagtg attgaatggg cagcaaatca gtcatggagt aatggaaata
    23581 tcgggacaaa tggcgtttct tatcttgcgg tgactcaatg gtgggtcgca tcattaaatc
    23641 caccacattt aaaagcaatg attccttggg aaggcttaaa tgatatgtat agagaagtaa
    23701 cctttcacgg aggtataccg gatactggct tttatcgttt ctggactcaa ggtatttttg
    23761 cgagatggac agataatcca aatatcgaag atttgattca agcacaacaa gaacaccctc
    23821 tgttcgatga tttttggaaa cagcgtcaag tgccattatc acaaattaaa acacctctac
    23881 taacatgtgc tagttggtct acacaaggtt tgcacaaccg tggctctttt gaaggattta
    23941 aacaagctgc atctgaagaa aaatggctat atgtgcatgg acgtaaagag tgggaaagtt
    24001 actacgctag agaaaatctc gaacgccaaa aatcattctt tgatttttac cttaaagaag
    24061 aaaataacga ttggaaagat acgcctcatg tcatatatga agttagagat caattttata
    24121 aaggcgaatt caaatcagcg tcagcgttcc ctttacctaa cacagaatat acaccattgt
    24181 atttgaatgc tgaaaatcac acattgaatc atgcaaagat tagtagcgcg catgtcgcac
    24241 aatatgactc tgaagataaa cgacaagatg taagttttaa atatacgttt gacaaagata
    24301 ctgagttagt tggaaacatg aacttaaaac tatgggtaag cactacagac tcagacgata
    24361 tggatttatt tgcaggtatt aaaaagttag atcgtcgtgg taatgaagtt aacttccctg
    24421 attttaatca tattgaaaat ggtcaagtag ctactggttg gttacgcgta tcacatcgtg
    24481 aattagatca agaaaaatcc acaattgcgc aaccttggca taaacatgaa acagaattaa
    24541 agttgtcaca agatgagatt gtacctgttg aaattgaatt gttaccttca ggcacgctat
    24601 ttaaacaagg cgaaacattg gaagttgttg taaaaggtag tgaaattgta attggtaata
    24661 gtacccctgg catgaaaaca cgttatgaac atgaagaaac cgtaaataaa ggcatgcaca
    24721 tgatttatac tggtggtaaa tatgattcac aattaatcat tcctatcgtt aattgatatg
    24781 cagcaattac ggtcgatttt gattaaaagt gacatagtga taggactgta taacaagaga
    24841 aggccacacg cttggaatct taaaccaagg tgtggccctt tttattattg atagctattt
    24901 aattttataa atcttgtcac taaacttact acaagcaata ttaaaccaat aaataaagcc
    24961 ataattgctg tattactttc gttgtttact cctgtttttg gtaattcttt caattgttgc
    25021 ttatgtactg acttgctctt gctatccaaa tgaatacttt gttgtttagc catttgttta
    25081 ttactttttg tgtgaatatc atttgcttta atacttggat ttacagcact attattcgtt
    25141 gttccatttg cgtttttcaa ctgattaata acatttggat ctttcgtgcc atctattaaa
    25201 ttatctggat gttttagtaa atgtctgcag tcggatacta ttttagaatc ttttgccttt
    25261 accgcattat tcggcacctc attatcatct ttcaactgct tgataacatc tggatctttc
    25321 gtgccatcta ttaaattatc aagttttttc acacgtgcta tgtcactaac tggccctgga
    25381 taatttgcat ccggttgtct aactggtatt aaattgctgt tttcattcac accttcaggt
    25441 ttgttatttt cggcgttcgc attatccgta aaaatcaaca ctgataaaat tgcaacaaat
    25501 aaacttataa cttttttcat cttattcatc ctttcctatt ttactacctt aatatcattg
    25561 ctattaaagt aacccatcca tctatttttt tcgtcgtata aagagtaata tttataccca
    25621 tttggaatat tgtaatagag tttagctgtg tacgctttat cttttttaat taatttatta
    25681 tcaccctttt ttgtaatttc aatgtttttc caatatatat acttactttt aattactttc
    25741 actttcttat tatatggatg acttctgtac ttacctatcc aataatttat gtaatctaat
    25801 tttaaatcat ttattctcac gcctgaatta tgattatatc tgccgtatgc atgtactccg
    25861 atgatattgt tttttgaatc tcttatcgca ctaccacttt gtcctgaaaa tgtatctact
    25921 gtataataca tttcattctc atcaaaactt tctaatttcc ctttaccttt atattgtctg
    25981 ttgtctgact tgtctcctgg aaatccagaa atctcaatat tttcaccttt gctaatgcgt
    26041 gtgttcaaag ttaagtaacc tgttttattt cctaaattat tatttaactt aataattgct
    26101 atatcttctt ttgtaggagc attattaatc caagatttag atacaaaaaa cttatgcgaa
    26161 aaggcctttc ctattgtata tgtttgccca tatactccag catagacatc aatcttttta
    26221 gcccaaccct tatcgtcttt agaatagaca ttatgagccg ctgtcaatac aatgtcctta
    26281 ccaatcatag taccggtgcc tttatataca cggttatttg aaaacgtcat atttaataat
    26341 acagtctgct tataaggtct ttgtaaaata ttattaacaa caattctttg atctttaccg
    26401 aaaactcgct cagttaaggg cgtactataa tcacctactt cataaagctc attttgatta
    26461 cgttcaattg ttcctgattc aaaattatta tcactaccat tttctgaatt gacgatagga
    26521 ttattatcag ctaagacaaa actttcacca taataactag aaacaattac tactaacaaa
    26581 atcaaaaatg atattttaaa aatttttgtc
//
LOCUS       DALMNS010000029        25320 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.029, whole genome shotgun sequence.
ACCESSION   DALMNS010000029 DALMNS010000000
VERSION     DALMNS010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 25320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25320
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.029"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(139..990)
                     /locus_tag="O6Y56_001009"
     CDS             complement(139..990)
                     /locus_tag="O6Y56_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF368 domain-containing protein"
                     /protein_id="HDB5574287.1"
                     /translation="MQQFKWINILKGFAMGTSDLVPGVSGGTIALLLGIYNQFIASIS
                     GIFSRRFWPSFTFLIPIIIGMLLAMGSLSNLFNYLLSQHHIPTMFFFGGLIIGIVPYL
                     LKISNYKTSFTTKHYMMVIAGIAILIVITLMNNGDKHAGETLTLSTGLIIKYFIAGMC
                     ASSAMLLPGISGSFMLLVFGVYGTVMLAISEVVKLNFAGLPILLAVGFGVLAGFIISS
                     KIIQYFLTHHKLMTFALIIGFVVGSLFAVFPGLPTNIVMWFVSLVVFIIGFIVSLTLG
                     RITAENE"
     gene            1319..2080
                     /gene="sufC"
                     /locus_tag="O6Y56_001010"
     CDS             1319..2080
                     /gene="sufC"
                     /locus_tag="O6Y56_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HDB5574288.1"
                     /translation="MASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKS
                     TLSSAIMGHPSYEVTKGEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFM
                     RSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQL
                     MMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGENFGALMITHYQRLLNYITPDKVH
                     VMYAGKVVKSGGPELAKRLEEEGYEWVKEEFGSAE"
     gene            2178..3485
                     /gene="sufD"
                     /locus_tag="O6Y56_001011"
     CDS             2178..3485
                     /gene="sufD"
                     /locus_tag="O6Y56_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HDB5574289.1"
                     /translation="MTTDILNISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPK
                     PDKTKLRKWDFDSFKQHDVKGDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQ
                     VDDNASKDGVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYV
                     PKNVVVEHPVQYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIIS
                     EVIAGANSNITYGSVDYMDKGFTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNL
                     FGDRSTSSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYI
                     KHGGTKSIANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMS
                     RGISQREAERLVIHGFLDPVVRELPIEDVKRQLREVIERKVSK"
     gene            3591..4841
                     /locus_tag="O6Y56_001012"
     CDS             3591..4841
                     /locus_tag="O6Y56_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDB5574290.1"
                     /translation="MNEVAEHSFDVNEVIKDFPILDQKVNGKRLAYLDSTATSQTPVQ
                     VLNVLEDYYKRYNSNVHRGVHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTA
                     SINLVAHSYGDANVEEGDEIVVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNI
                     EDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDM
                     QEMNADFYSFSGHKMLGPTGIGVLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLP
                     TKFEAGTPLIAQAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPP
                     KDRRAGVITFNLQDVHPHDVATAVDTEGVAVRAGHHCAQPLMKWLNVSSTARASFYIY
                     NTKEDIDQLINALKQTKEFFSYEF"
     gene            4831..5295
                     /locus_tag="O6Y56_001013"
     CDS             4831..5295
                     /locus_tag="O6Y56_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HDB5574291.1"
                     /translation="MNFNNLDQLYRSVIMDHYKNPRNKGVLDNGSMTVDMNNPTCGDR
                     IRLTFDIEDGIIKDAKFEGEGCSISMASASMMTQAVKGHSLGEAMQMSQEFTKMMLGE
                     DYVITEEMGDIEALQGVSQFPARIKCATLAWKALEKGTVAKEGKAEGTTEEE"
     gene            5446..6843
                     /gene="sufB"
                     /locus_tag="O6Y56_001014"
     CDS             5446..6843
                     /gene="sufB"
                     /locus_tag="O6Y56_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HDB5574292.1"
                     /translation="MAKKAPDVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEP
                     EWMLDFRLKSLKLFYKMPMPQWGGDLSELNFDDITYYVKPSEQAERSWDEVPEEIKRT
                     FDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKY
                     FASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLII
                     ADEGASVHYVEGCTAPVYTTSSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRT
                     FVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHK
                     APNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYN
                     EVFNDQISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAV
                     EMNRLIKFEMEGSIG"
     gene            7029..7168
                     /locus_tag="O6Y56_001015"
                     /pseudo
     CDS             7029..7168
                     /locus_tag="O6Y56_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499406.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(7174..7488)
                     /locus_tag="O6Y56_001016"
     CDS             complement(7174..7488)
                     /locus_tag="O6Y56_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574293.1"
                     /translation="MYFVLAIFTIISASVSLGYSIQACASSHNINAYYALSRSLPLFL
                     LAIFSLVIHSAIFLITISIAMILVQFLDAIVGYKSKDVFKTYGPLATSVVNLILLIVF
                     LF"
     gene            7853..8893
                     /locus_tag="O6Y56_001017"
     CDS             7853..8893
                     /locus_tag="O6Y56_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDB5574294.1"
                     /translation="MIIAIIILIFISFFFSGSETALTAANKTKFKTEADKGDKKAKGI
                     VKLLEKPSEFITTILIGNNVANILLPTLVTIMALRWGISVGIASAVLTVVIILISEVI
                     PKSVAATFPDKITRLVYPIINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQFSKE
                     EFKTMLAIAGHEGALNEIETSRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVY
                     ETVMNKPYTRYPVYEGDIDNIIGVFHSKYLLAWSNKKENQITNYSAKPLFVNEHNKAE
                     WVLRKMTISRKHLAIVLDEFGGTEAIVSHEDLIEELLGMEIEDEMDKKEKEKLSQQQI
                     QFQQRKNRNVSI"
     gene            8907..9974
                     /locus_tag="O6Y56_001018"
     CDS             8907..9974
                     /locus_tag="O6Y56_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HDB5574295.1"
                     /translation="MWNKNRLTQMLSIEYPIIQAGMAGSTTPKLVASVSNSGGLGTIG
                     AGYFNTQQLEDEIDYVRQLTSNSFGVNVFVPSQQSYTSSQIENMNAWLKPYRRALHLE
                     EPVVKITEEQQFKCHIDTIIKKQVPVCCFTFGIPNESIIKRLKEANIKLIGTATSVDE
                     AIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVSIPVIAVGG
                     IMDGRGVLASIVLGAEGVQMGTAFLTSRDSNASELLRDAIINSKETDTVVTKAFSGKL
                     ARGINNRFIEEMSQYEGDIPDYPIQNELTSSIRKAAANIGDKELTHMWSGQSPRLATT
                     HPANTIMSNIINQINQIMQYK"
     gene            10038..10137
                     /locus_tag="O6Y56_001019"
                     /pseudo
     CDS             10038..10137
                     /locus_tag="O6Y56_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499410.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            10314..11162
                     /locus_tag="O6Y56_001020"
     CDS             10314..11162
                     /locus_tag="O6Y56_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HDB5574296.1"
                     /translation="MINIGLTGWGDHYSLYEDLERQTDKLKTYAGHFPVVELDATYYA
                     IQPERNILKWIKETPDTFEFVVKIHQALTLHADYKTFADSRQELFDQFKNMIEPLHTQ
                     KKLAMVLVQFPPWFDCNAQNIKYILYVRQQLQAFPMCVEFRHQSWFSDAFKEQTLAFL
                     TEHQIIHAVVDEPQVKDGSVPLVNRITNEIAFVRYHGRNHYGWTKKDMSDQEWRDVRY
                     LYDYNEQELIDLAQKAQILAQKAKKVYVIFNNNSGGHAANNAKTYQRLLNIEYEGLAP
                     QQLKLF"
     gene            11175..12002
                     /locus_tag="O6Y56_001021"
     CDS             11175..12002
                     /locus_tag="O6Y56_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDB5574297.1"
                     /translation="MLLTITLLVLIGGLSAIIGSIVGIGGGIIIVPTMVYLGVEHGLL
                     HNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISRY
                     LTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKTYHYSVPPLF
                     AFITTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSVMSSIGHI
                     AQGHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTLLRTVMLLMGIYLIIRALI"
     gene            12029..13348
                     /locus_tag="O6Y56_001022"
     CDS             12029..13348
                     /locus_tag="O6Y56_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HDB5574298.1"
                     /translation="MRLTIYHTNDIHSHLHEYERIKAYMAEQLPRLNHPSLYVDLGDH
                     VDLSAPITEATLGKKNVALLNEAKCDVATIGNNEGMTISHEALNHLYDEAKFIVTCSN
                     VIDESGHLPNNIVSSYIKDIDGVKILFVAATAPFTPFYRALDWIVTDPLESIKEEIEH
                     QRGKFDVLIVLSHCGIFFDETLCQELPEIDVIFGSHTHHYFEHGEINNGVLMAAAGKY
                     GNYLGEVNLTFEAHKVVHKTAKIIPLETLPEVKTSFEEEGKTLMSNPVIQHPVVLKRS
                     MNHITEAAYLLAQSVCEYTHAQCAIINAGLLVKDIVKDKVTEYDIHQMLPHPINMVRF
                     RLSGVKLKEIIAKSNKQEYMYEHAQGLGFRGNIFGGYILYNLGYIHSTGRYYLNGEEI
                     EDDKEYVLGTIDMYTFGRYFPTLKELPKEYLMPEFLRDIFKEKLLEY"
     gene            13432..14349
                     /gene="lipA"
                     /locus_tag="O6Y56_001023"
     CDS             13432..14349
                     /gene="lipA"
                     /locus_tag="O6Y56_001023"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HDB5574299.1"
                     /translation="MATKNEEILRKPDWLKIKLNTNENYTGLKKMMREKNLNTVCEEA
                     KCPNIHECWGARRTATFMILGAVCTRACRFCAVKTGLPNELDLNEPERVAESVELMNL
                     KHVVITAVARDDLRDAGSNVYAETVRKVRERNPFTTIEILPSDMGGDYDALETLMASR
                     PDILNHNIETVRRLTPRVRARATYDRTLEFLRRSKELQPDIPTKSSIMVGLGETIEEI
                     YETMDDLRANDVDILTIGQYLQPSRKHLKVQKYYTPLEFGKLRKVAMDKGFKHCQAGP
                     LVRSSYHADEQVNEAAKEKQRQGEAQLNS"
     gene            14479..14862
                     /locus_tag="O6Y56_001024"
     CDS             14479..14862
                     /locus_tag="O6Y56_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YutD family protein"
                     /protein_id="HDB5574300.1"
                     /translation="MIKVDQHYFELIENYRECFNEEQFIARYSDILDKYDYIVGDYGY
                     DQLRLKGFYKDSNKKAEMSKRFSNIQDYIFEYCNFGCPYFVLRHLSKQEVKKLIEEVH
                     PSDVIDDDNKLQDVKIKPTIQDTEH"
     gene            complement(14941..15207)
                     /locus_tag="O6Y56_001025"
     CDS             complement(14941..15207)
                     /locus_tag="O6Y56_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3055 domain-containing protein"
                     /protein_id="HDB5574301.1"
                     /translation="MIDMYLYDDNEESQVQFVGFVGEHGRYDLMLVHTNRHYGKTLVL
                     NMQTNKFGIIGTDDLKEEGYIAHILGVNAEEGDEITEYLNEVIH"
     gene            15305..15739
                     /locus_tag="O6Y56_001026"
     CDS             15305..15739
                     /locus_tag="O6Y56_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF86 domain-containing protein"
                     /protein_id="HDB5574302.1"
                     /translation="MYFVDKDKLTQKLAYLQALTDDYHESKHNHYAFERIAQMLIESS
                     VDIGNMIIDAFILRDPGNYKDVIDILELENVITKETQQAINKTVDIRKQFTYDYTALD
                     IKVIMPMFDDALPYYKQFITEVTTFLHQENVPVTAFGKGENQ"
     gene            15739..16518
                     /locus_tag="O6Y56_001027"
     CDS             15739..16518
                     /locus_tag="O6Y56_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01457 family HAD-type hydrolase"
                     /protein_id="HDB5574303.1"
                     /translation="MKQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTN
                     NSTKTPEQVTEKLREMHIDAKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALT
                     EAGLVIKNDEHVDYVVIGLDEQVTYEKLAIATLGVRNGATFISTNPDVSIPKERGFLP
                     GNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGIN
                     VGMDTIHVQTGVSTLEDVQNKNVPPTYSFKDLNEAIAELEK"
     gene            16551..17510
                     /locus_tag="O6Y56_001028"
     CDS             16551..17510
                     /locus_tag="O6Y56_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000239136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HDB5574304.1"
                     /translation="MVKIVVSRKIPDKFYQQLSKLGDVVMWQKSLVPMPKDQFVTALR
                     DADACFITLSEQIDAEILAQSPNLKVIANMAVGYDNIDVESATANNVVVTNTPNVLTE
                     TTAELGFTLMLAIARRIVEAEKYVEADAWQSWGPYLLSGKDVFNSTIGIYGMGDIGKA
                     FARRLQGFNTKILYHNRSRHKDAEADLNATYVSFETLLAESDFIICTAPLTKETHHKF
                     NAEAFAQMKNDAIFINIGRGQIVDETALINALDNKEILACGLDVLANEPIDHTHPLMG
                     RDNVLITPHIGSASVTTRDNMIQLCINNIEAVMTNQVALTPVN"
     gene            17764..17874
                     /locus_tag="O6Y56_001029"
     CDS             17764..17874
                     /locus_tag="O6Y56_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574305.1"
                     /translation="MMTTNYYVESIKLKLNFIMNIDIMNCKKQILKRILY"
     gene            17922..18074
                     /locus_tag="O6Y56_001030"
     CDS             17922..18074
                     /locus_tag="O6Y56_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499421.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acid D-Ala incorporation-associated
                     protein DltX"
                     /protein_id="HDB5574306.1"
                     /translation="MKSKSKQPPNKYVEAFKPYLLTLLYLAIFITLYLIYGSGDTHNN
                     FIYNEF"
     gene            18090..19547
                     /gene="dltA"
                     /locus_tag="O6Y56_001031"
     CDS             18090..19547
                     /gene="dltA"
                     /locus_tag="O6Y56_001031"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     DltA"
                     /protein_id="HDB5574307.1"
                     /translation="MTDIINKLQAFADTNPQSIAVRHTTDELTYQQLMDESSKLAHRL
                     QGSKKPMILFGHMSPYMIVGMIGAIKAGCGYVPVDTSIPEDRIKMIINKVQPEFVFNT
                     TDESFESLEGEVFTIEDIKTSQDPVIFDSQIKDNDTVYTIFTSGSTGEPKGVQIEYAS
                     LVQFTEWMLELNKSGNEQQWLNQAPFSFDLSVMAIYPCLASGGTLNLVDKNMINKPKL
                     LNEMLTATPINIWVSTPSFMEMCLLLPTLNEEQYGSLNEFFFCGEILPHRAAKALVSR
                     FPSATIYNTYGPTEATVAVTSIQITQEILDQYPTLPVGVERPGARLSTTDEGELVIEG
                     QSVSLGYLKNDQKTAEVFNFDDGIRTYHTGDKAKFENGQWFIQGRIDFQIKLNGYRME
                     LEEIETQLRQSEFVKEAIVVPVYKNDKVIHLIGAIVPTTEATDNAEMTKNIKNDLKSR
                     LPEYMIPRKFEWMEQLPLTSNGKIDRKKIAEVING"
     gene            19544..20758
                     /gene="dltB"
                     /locus_tag="O6Y56_001032"
     CDS             19544..20758
                     /gene="dltB"
                     /locus_tag="O6Y56_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PG:teichoic acid D-alanyltransferase DltB"
                     /protein_id="HDB5574308.1"
                     /translation="MIPYGDFTFFLIALIALLPVIILGFLGKRSYIYNGVVTAFMIVL
                     IFSSDKHNLFDQKYLSVQLISFIIYVVWQVLLIMFYYHSKPKNNSFSKFVTVMVLSIL
                     PLALVKVLQSTWLGGHQIHFHESKLIEFVGFLGISYVTFKSVQLIMEIRDGSIKEIKV
                     WKLIQFISFFPTISSGPIDRYKRFVKDDKKVPTGNEYRELVLKAIHMIMLGFLYKYIV
                     AYFINTYAIMPLQLDLHGFVNLWLYMYAYSLYLFFDFAGYSLFAIAFSYLFGIKTPPN
                     FDKPFKAKNIKDFWNRWHMTLSFWFRDCIYMRSLFYMSRKKLLKSQFAMSNVAFLINF
                     FIMGIWHGIEVYYIVYGLYHAALFIGYGYYERWRKKHPPRWQNGFTTALSIVITFHFV
                     TFGFLIFSGKLI"
     gene            20776..21012
                     /gene="dltC"
                     /locus_tag="O6Y56_001033"
     CDS             20776..21012
                     /gene="dltC"
                     /locus_tag="O6Y56_001033"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002433359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     2"
                     /protein_id="HDB5574309.1"
                     /translation="MEFREQVLNLLAEVAENDIVKENPDVEIFEEGIIDSFQTVGLLL
                     EIQNKLDIEVSIMDFDRDEWATPNKIVEALEELR"
     gene            21009..22184
                     /gene="dltD"
                     /locus_tag="O6Y56_001034"
     CDS             21009..22184
                     /gene="dltD"
                     /locus_tag="O6Y56_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-lipoteichoic acid biosynthesis protein
                     DltD"
                     /protein_id="HDB5574310.1"
                     /translation="MKLKPFLPILISGAVFIVFLLLPASWFTGLVNEKTVEDNRTSLT
                     DQVLKGTLIQDKLYESNKYYPIYGSSELGKDDPFNPAIALNKHNANKKAFLLGAGGST
                     DLINAVELASQYDKLKGKKLTFIISPQWFTNHGLTNQNFDARMSQTQINQMFQQKNMS
                     TELKRRYAQRLLQFPHVHNKEYLKSYAKNPKETKDSYISGFKENQLIKIEAIKSLFAM
                     DKSPLEHVKPATKPDASWDEMKQKAVEIGKADTTSNKFGIRDQYWKLIQESKRKVRRD
                     YEFNVNSPEFQDLELLVKTMRAAGADVQYVSIPSNGVWYDHIGIDKERRQAVYKKIHS
                     TVVDNGGKIYDMTDKDYEKYVISDAVHIGWKGWVYMDEQIAKHMKGEPQPEVDKPKN"
     gene            complement(22447..22689)
                     /locus_tag="O6Y56_001035"
     CDS             complement(22447..22689)
                     /locus_tag="O6Y56_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HDB5574311.1"
                     /translation="MPSEDTTMFDQVAEVIERLRPFLLRDGGDCSLIDVEDGIVKLQL
                     HGACGTCPSSTITLKAGIERALHEEVPGVIEVEQVF"
     gene            22790..23113
                     /locus_tag="O6Y56_001036"
     CDS             22790..23113
                     /locus_tag="O6Y56_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YuzD family protein"
                     /protein_id="HDB5574312.1"
                     /translation="MEHVSVVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNITF
                     KYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQ
                     KLVNE"
     gene            complement(23173..24237)
                     /locus_tag="O6Y56_001037"
     CDS             complement(23173..24237)
                     /locus_tag="O6Y56_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDB5574313.1"
                     /translation="MKNLVLLGGGYGNMRIMSRILTTSLPQDYTVTLVDRMPFHGLKP
                     EFYALAAGTKSDKDVRMKFPNHPQVNTVYGEINDIDLDAQIVSVGNSKIDYDELIIGL
                     GCEDKYHNVPGAEEYTHSIQTLSKARDTFHSISELPEGAKVGIVGAGLSGIELASELR
                     ESRSDLEIYLYDRGPRILRNFPEKLSKYVAKWFAKNNVTVVPNSNINKVEPGKIYNCD
                     EPKDIDLVVWTAGIQPVEVVRNLPIDINSNGRVIVNQYHQVPTYRNVYVVGDCADLPH
                     APSAQLAEVQGDQIADVLKKQWLNEPLPDKMPELKVQGIVGSLGDKQGFAYIMDRTVT
                     GRLASILKSGVLWLYKYHNG"
     gene            24554..24790
                     /locus_tag="O6Y56_001038"
     CDS             24554..24790
                     /locus_tag="O6Y56_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YuzB family protein"
                     /protein_id="HDB5574314.1"
                     /translation="MNPIVEFCLSNMAKGGDYVFNQLENDPDVDVLEYGCLTHCGICS
                     AGLYALVNGDIVEGDSPEELLQNIYAHIKETWIF"
     gene            24803..25162
                     /locus_tag="O6Y56_001039"
     CDS             24803..25162
                     /locus_tag="O6Y56_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HDB5574315.1"
                     /translation="MPTVILTEAAAYEVKDMLKANEMPDGYLKIKVNGGGCTGLTYGM
                     GAEEAPGENDEVLEYFGLKVLVDKKDAPVLNGTTIDFKQSLMGGGFQIDNPNAIASCG
                     CGSSFRTAKVAGNPENC"
BASE COUNT         9145 a         3684 c         4607 g         7884 t
ORIGIN      
        1 ttattaataa ttattttaat gttagaaaaa aactaaataa aaactcgcta atgatatcca
       61 acaatatgta tacaaaacga gacatatatt gcatatgatt aacgagatac tgaatatatt
      121 ttatcacccc taaaatgatt attcattttc agcggtaatt cgacctaaag tcaaacttac
      181 aataaaaccg atgataaata ctactaatga aacgaaccac atcacgatat tagttggtaa
      241 acctggaaat actgcaaaga gggagccaac aacaaaacca atgattaatg caaaagtcat
      301 tagtttatga tgtgttagga aatactggat aattttgctt gaaataatga atccagcaag
      361 cacgccaaat ccgactgcaa gtaatatagg aagaccggca aagttaagtt taacaacttc
      421 agatattgct agcatgactg tgccatagac gccaaatact aataacataa atgaccctga
      481 aatacctggg agtaacatag cactagatgc acacatacct gcaataaagt atttaataat
      541 aagaccagtt gatagagtaa gtgtttctcc agcatgttta tcgccattat tcattaatgt
      601 aataacaatt aagatagcga taccagctat aaccatcatg taatgtttag ttgtaaatga
      661 cgttttatag ttagaaattt tcaataaata tggaacgata ccaatgatta atccaccaaa
      721 gaaaaacata gttggaatat ggtgttggct taataaataa ttaaaaagat tacttagtga
      781 tcccattgcc agtaacattc caattataat ggggattaaa aatgtaaaac ttggccaaaa
      841 acgtcgtgag aatatgccgc taattgaagc gataaattga ttgtatatac ctaacaataa
      901 tgcgatagtc ccaccgctaa caccaggtac caagtcactc gttcccatag caaaaccttt
      961 tagaatatta atccatttaa attgttgcat gaataactcc tttcaaacga ttggaataaa
     1021 gtcataaata gcatcatacc atattacaaa tgtcctagtg aaatgataac atattttaaa
     1081 ttcataaaat ccattgagaa attatgtgca cttattatca tttatatttt taaaagagag
     1141 cggcttagac ttgtacttta gagttattaa aaataataaa aagggtttaa gttgtttata
     1201 ttaaggtata agtaagttat aattaactga acgcattatt acaaagtctt tttgactaca
     1261 aattaaaatt attataaact agttaagaaa actttatatt ttacggaggg aatataaaat
     1321 ggcatcaaca ttagaaatca aagacctaca tgtgtctatt gaggataaag aaatcttaaa
     1381 aggtgttaac ttgacaatta acactgatga aatacatgcg attatgggac caaacgggac
     1441 aggtaaatca actttatcat ctgcaattat gggacaccca agctatgaag taactaaagg
     1501 agaagtactt ttagacggtg taaatatttt agaattagaa gttgatgaaa gagcaaaagc
     1561 aggattattc ttggcaatgc aatatccatc agaaattaca ggtgttacaa atgctgattt
     1621 catgcgttca gcaatcaatg cgaaacgtga agaaggacaa gaaatcaact taatgcaatt
     1681 tattaagaaa ttagataaaa atatggattt tctagacata gataaagaca tggcacaacg
     1741 ttatttaaat gaaggtttct caggtggaga gaagaaacgt aacgaaatct tacaattaat
     1801 gatgttagaa cctaagtttg caatcttaga tgaaatcgat tcaggattag acatcgatgc
     1861 attaaaagtt gtatctaaag gtattaacca aatgcgtggg gaaaactttg gtgcattaat
     1921 gatcacacac tatcaacgat tattaaatta cattactcct gataaagtac atgtaatgta
     1981 tgctggtaag gtcgttaaat ctggtggtcc agaattagca aaacgtcttg aagaagaagg
     2041 atatgaatgg gttaaagaag agttcggttc agctgaataa tcttattaat acagtatcca
     2101 tgagatgttc atctatatat gatgaaaatg aacatttata cgaaatagta aatttcatca
     2161 agtaggagga aaaagttatg acaactgata ttttgaacat ttctgaagaa caacttgttg
     2221 attattctaa agcccacaat gaaccttctt ggatgacaga attacgtaaa aaagctttga
     2281 aattaacaga aactttagaa atgccaaaac ctgataaaac aaaattaaga aaatgggatt
     2341 ttgattcttt taaacaacac gatgtaaaag gtgatgttta tcaatcttta tcacaattac
     2401 ctgagtcagt aagagaaatt attgacgtag atcattctaa aaacttagta attcaacata
     2461 ataatacgat tgcgtacaca caagttgatg ataatgcatc gaaagatggc gttatcgttg
     2521 aaggtttagc agacgctctt atgaatcata gtgatttagt acaaaagtac tttatgaaag
     2581 atgcagtaac agtagatgaa catcgtatca cagcgctaca cacggcatta gttaatggtg
     2641 gcgtatttgt ttatgttcct aaaaatgtag ttgtagaaca tccagtacaa tacgttgtgt
     2701 tgcacgatga cgaaaatgca agcttttata accatgtcat catcgttact gaagaaagcg
     2761 ccgaagtcac atatgttgaa aattacttat caaatgcatc tggtgaagga aatcaattaa
     2821 atattatttc tgaagtgatt gctggtgcaa attcaaatat cacgtatggc tcagtagact
     2881 atatggataa aggctttaca ggtcatatca ttcgacgtgg tattactgaa gcggatgcct
     2941 caattaattg ggcactaggt ttaatgaatg agggtagcca aattattgat aatacaacaa
     3001 atttatttgg tgatcgttca acaagttcac ttaaatcagt agttgtaggt acaggcgaac
     3061 aaaaaattaa tctaacatct aaaatcgtac aatatggtaa agaaacagat ggttatatcc
     3121 ttaaacatgg tgttatgaaa gaacatgcat catctgtatt taatggtatc ggctacatta
     3181 agcatggtgg aactaaatca attgctaatc aggaatcacg tgtattaatg ttatctgaac
     3241 atgctcgtgg tgacgcgaat ccaattttat taattgatga agatgatgta caagctggtc
     3301 atgctgcatc agtaggtcgt gttgatccag atcaacttta ctatttaatg agccgtggta
     3361 tttctcaaag agaagcggaa cgtcttgtta tacatggttt cttagatcca gtagtacgtg
     3421 aattacctat cgaagacgtt aaacgtcaat tgagagaagt aattgaacgc aaagtttcta
     3481 aataatattt tgaaaataaa agtttgtaat agatatagac tgtcgatatt ggtataagac
     3541 taatacaacg tcagtattta aatgattagg atttttattt aagaaaggtc gtgaatgaag
     3601 tggccgaaca ctcatttgac gttaatgaag taatcaagga ttttccgata ttagatcaaa
     3661 aagtcaatgg caaacgttta gcatatcttg attcaacagc gacaagtcaa acgcctgtgc
     3721 aagtgttaaa tgttttagag gattactaca agcgttataa ttcaaacgtt catcgtggtg
     3781 ttcatacatt aggatcattg gcaactgatg gttatgaaaa tgcccgtgaa accgttcgtc
     3841 gttttattaa tgcgaagtat tttgaagaaa tcattttcac acgcggaaca actgcatcga
     3901 ttaaccttgt agcacatagc tatggtgatg caaatgttga agagggcgat gaaattgttg
     3961 tcactgaaat ggaacatcat gccaatattg ttccttggca acagttagca aagcgtaaaa
     4021 atgcgacatt gaaatttata ccaatgacag ctgacgggga attaaacatc gaagatatta
     4081 agcaaacgat taatgataaa acaaagatcg ttgctattgc acatatttct aatgtactcg
     4141 gtacaattaa tgatgttaaa accattgcag aaatagctca tcaacatggt gcaattatca
     4201 gtgttgatgg ggcgcaagca gcaccacata tgaaacttga tatgcaagaa atgaatgctg
     4261 atttttatag ttttagtggt cataaaatgc ttggaccaac aggtattggc gtattatttg
     4321 gtaaacgtga gttactacaa aaaatggaac cgattgagtt cggtggcgac atgattgatt
     4381 ttgtaagtaa gtatgatgca acatgggctg atttacctac taaatttgaa gcgggtactc
     4441 cattaattgc tcaagcaatt gggcttgcag aagctattcg atatttagaa cgcataggtt
     4501 ttgatgcaat tcataaatat gaacaagaat taacgatata tgcttatgag caaatgtctg
     4561 caattgaagg aattgaaatt tatggcccgc caaaggatcg tcgtgcaggt gtaataacgt
     4621 ttaatttaca agatgtacat ccacacgatg ttgctacagc cgtagataca gaaggtgtag
     4681 cggttagagc tgggcatcat tgtgcgcaac cgttaatgaa atggttaaat gtgtcttcaa
     4741 cagctagagc gagtttttat atatacaaca cgaaagaaga cattgatcag ttaataaatg
     4801 ccttgaaaca aacgaaggag tttttctctt atgaatttta ataatctaga tcaattatat
     4861 agatctgtca ttatggatca ttataaaaat cctagaaata aaggtgtatt agataacggg
     4921 tctatgacag tagatatgaa taacccgaca tgcggtgacc gtatacgact aacatttgat
     4981 atagaagacg gcattataaa agatgctaag tttgaaggtg aaggttgttc gatttcaatg
     5041 gcaagtgcat cgatgatgac acaagctgtt aaaggtcatt cacttggaga agcaatgcaa
     5101 atgagccaag aatttacgaa aatgatgctt ggtgaagact atgtgattac agaagaaatg
     5161 ggagatattg aagcattgca aggtgtatct caattcccag ctcgtattaa atgtgccaca
     5221 ttagcttgga aagcattgga aaaaggtact gttgctaaag aaggtaaagc agaaggtacg
     5281 actgaagaag aatagaatgc tgttaatcat agatgatttt gatattagac atataaaagt
     5341 ataaaaattt ttataagatg tcatgtcatt gttataatat ggtttacatc atgaattaaa
     5401 aacttacgca cgccgttgta aatatatttt taaggagtga ttgaaatggc taaaaaagca
     5461 cctgatgttg gggattataa atatggattc cacgacgatg atgtgtccat tttcagatca
     5521 gaacgtggtt taactgagaa tatcgttaga gaaatttcta acatgaaaaa tgagccggaa
     5581 tggatgttag atttccgtct taaatcatta aaattgtttt ataaaatgcc aatgcctcaa
     5641 tggggtggcg acttatcaga attgaatttc gatgacatta cttactatgt aaagccttca
     5701 gaacaagctg aacgttcatg ggatgaagtg ccagaagaaa ttaaaagaac tttcgataaa
     5761 ttaggaattc ctgaagctga acaaaaatat ttagctggcg tttctgctca atatgaatct
     5821 gaagttgttt accataatat ggaaaaagaa cttgaagaaa aaggtattat ctttaaagat
     5881 acagatagtg ctttacaaga aaatgaagaa ttattcaaaa aatactttgc ttctgtagta
     5941 cctgcagcag ataacaaatt tgcggcgtta aactcagcag tatggtcagg aggttcgttc
     6001 atttatgtac ctaaaaatat caaactagat acgccattac aagcttattt ccgtattaac
     6061 tctgagaaca tgggtcaatt tgaacgtaca ttaatcattg ctgatgaagg tgcttctgta
     6121 cattacgtag aaggttgtac tgcaccagtt tatacaacta gctctttaca ctctgctgtt
     6181 gtggaaatca ttgtgcataa agatgcgcac gttcgttata ctacgattca aaactgggcg
     6241 aacaatgtat acaatttagt tacaaaacgt acttttgttt atgaaaacgg aaatatggaa
     6301 tgggtagatg gtaacttagg ttctaagtta acgatgaaat atccaaactg tgttctttta
     6361 ggtgaaggtg caaaaggtag tacattatct attgcatttg ctggtaaagg acaagttcaa
     6421 gatgccggtg ctaaaatgat tcataaagcg ccaaatacat cttcaacgat tgtttctaaa
     6481 tctatttcta aaaatggtgg taaagttatt tatcgtggta ttgtacattt tggacgtaaa
     6541 gcaaaaggcg ctcgttcaaa tattgaatgt gatacattaa tcttagataa cgaatcaaca
     6601 tcagatacaa ttccatataa cgaagtattc aacgatcaaa tatcattaga acatgaagcg
     6661 aaagtttcaa aagtttctga agaacaatta ttctatctaa tgagtcgtgg tatttctgaa
     6721 gaagaagcga cagaaatgat tgttatggga ttcatcgaac catttacaaa agaacttcca
     6781 atggaatacg cggtcgaaat gaaccgttta atcaagttcg aaatggaagg tagtattggg
     6841 tagctttaaa ccgcgttgtt aagccattct tgacttccgg aaatggctat tgataccatt
     6901 ttgatactga atataacaaa aagccacatt actgtggctt ttttgtttta taactaaatc
     6961 ggattgatag ataagctttg tacttattta tatcagtccg attttttgat tggtgtaaaa
     7021 aataatcatt gatggtgaat aaagcgacaa cacaaataca acatgattgt ggcattagag
     7081 tgctggtctt tattaaatta attgaaaact acatcaaata ttctttaaag ataattcgat
     7141 attagttcga ttaagattcg ttgtataagt gagttaaaat aagaaaacta ttaataatat
     7201 taagttcact acagatgttg ctaatgggcc gtaagtttta aagacatctt tacttttata
     7261 accaacaatc gcatctaaaa attgaactaa aatcattgca atggatatag ttatcaaaaa
     7321 tatagcacta tgaatgacta aagaaaaaat agctaataaa aataaaggta agcttcgact
     7381 aagtgcataa tatgcattta tattatggct agatgcacat gcttgaattg aataacctaa
     7441 acttacactg gcgctaatga ttgtaaatat tgctaaaaca aaatacatgt taatccttct
     7501 ttctatattt gaatataaac aagtacttgt ctaaagatat ttaaaagata attagaataa
     7561 atttatgaga aacttgttgt tatcattata acggtttcaa atcattataa ctatgtcata
     7621 aactgaattt gttaaaattt ttcattatgt aaatttattc gtaacaatca gctcgaacta
     7681 tagcatcatt ttactaatga atgcattaaa gtaactatga ttaaaaatgc atattaatta
     7741 tcattattaa gtctattata tataatgaat tttaactggt ttattaaacg agaacgtcgg
     7801 gaattaagta actacaataa aaataagata tgacaataag gagactacac gcgtgatcat
     7861 tgccataatt atattgatat ttatttcgtt tttcttttca ggaagcgaga cggcattaac
     7921 ggctgccaat aaaacaaaat ttaaaactga agctgacaaa ggtgataaaa aagcaaaagg
     7981 cattgtaaag ttacttgaaa aaccaagtga gtttattaca acgattctaa ttggaaataa
     8041 tgtcgcgaat attttattac caacacttgt tacaattatg gctttacgtt gggggattag
     8101 cgttggtatt gcatcagctg ttttaacagt tgttatcatt ttgatttccg aagtgattcc
     8161 caagtctgtc gctgcaacat ttccagataa aataacaagg cttgtatatc caattattaa
     8221 tatttgtgta attgtgttcc gtcctatcac attactttta aataagttga cggacagtat
     8281 taatcgaagt ttatctaagg gtcaacctca agaacatcaa ttttcaaaag aagaatttaa
     8341 aacaatgtta gcaattgctg gacatgaagg tgctttaaat gaaattgaga cgagtaggtt
     8401 ggaaggtgtc attaattttg aaaatttaaa agtaaaagat gttgatacaa cacctagaat
     8461 taatgtgacg gcatttgctt caaatgcgac atacgaagaa gtttatgaaa cggttatgaa
     8521 taagccatac actagatatc cagtgtacga gggagatatt gataacatta ttggggtgtt
     8581 tcattctaaa tatctgttgg cttggagtaa taaaaaagaa aatcaaatta caaactattc
     8641 agctaagcca ttatttgtga atgaacacaa taaagctgaa tgggtattac gtaagatgac
     8701 tatttctaga aaacatttag caattgtgtt ggacgaattt ggtggtactg aagcgatagt
     8761 gtcacatgaa gacttaattg aagaattatt aggtatggaa attgaagatg agatggataa
     8821 aaaggaaaaa gaaaaacttt ctcaacagca aattcaattt caacaacgga aaaatcgcaa
     8881 cgtatctata taaggagcga acagatatgt ggaataagaa tcgacttact caaatgttaa
     8941 gtattgaata tccaattata caagcaggta tggcaggaag tacgacaccg aaattagttg
     9001 catcagtaag taacagtggt ggattaggca caataggcgc aggttacttt aatacgcagc
     9061 aattagaaga cgaaatagat tatgtacgcc aattaacgtc aaattctttt ggtgtaaatg
     9121 tctttgtacc aagtcaacaa tcatatacca gtagtcaaat tgaaaatatg aatgcatggt
     9181 taaaacctta tcgacgcgca ttacatttag aagagccggt tgtaaaaatt accgaagaac
     9241 aacaatttaa gtgtcatatt gatacgataa ttaaaaagca agtgcctgta tgttgtttta
     9301 cttttggaat tccaaatgaa tctattataa aaagattgaa agaagcaaac attaagctaa
     9361 taggtacagc aacaagtgtt gatgaagcta ttgcgaatga aaaagcgggt atggatgcta
     9421 tcgttgctca aggtagtgaa gcaggtggac atcgtggttc atttttaaaa cctaaaaatc
     9481 aattacctat ggttggaaca atatctttag tgccacaaat tgtagatgtc gtttcaattc
     9541 cggtcattgc cgttggtgga attatggacg gtagaggagt tttggcaagt attgtcttag
     9601 gtgcagaagg ggtacaaatg ggcaccgcat ttttaacatc acgagatagt aatgcatcag
     9661 aactactgcg agacgcaatt ataaatagta aagaaacaga tacagtcgtt acaaaagcgt
     9721 ttagtggaaa gcttgcacgc ggtatcaaca ataggtttat cgaagaaatg tcccaatacg
     9781 aaggcgacat cccagattat ccaatacaaa atgagctaac aagtagcata agaaaagccg
     9841 cagcaaacat cggcgacaaa gagttaacac atatgtggag tggacaaagc ccgcgactag
     9901 caacaacgca tcctgccaac accatcatgt ccaatataat caatcaaatt aatcaaatca
     9961 tgcaatataa ataatcgacc gcaatccaca aaagcacaag tactcccaaa cattatttta
    10021 gtgcttgcca ttgtggattg cgtttctatt ttaccaatct aatcaaacga aaacatcaaa
    10081 ctaaagttcg ctgaaatgat tataattaaa cgaaaacatc aaactaaagt tcactgaaat
    10141 gattatagtc aaacgaaaac atcaagctaa agttcgctga aatgattata gtcaaacgaa
    10201 attatcgagc taaagttcgc tgaaatgata atgattaaac gaaatcatca aactaaagtt
    10261 cgctgaaatg attatgataa aagttatatg gtatgatgac attggtgata tatatgataa
    10321 acatcggatt aacaggttgg ggtgatcact attcattata tgaagattta gaacgccaaa
    10381 ccgataaact taaaacatat gctggacatt ttccggttgt cgaattagat gcgacatact
    10441 atgcgataca accggaaaga aatatattga aatggataaa agaaacgcct gatacatttg
    10501 aatttgtggt taaaattcat caagcactca cattgcatgc agactacaaa acatttgcag
    10561 attcaaggca agaactattt gatcaattta agaatatgat agagccctta catacacaga
    10621 aaaaattagc aatggtattg gttcaatttc ctccatggtt tgactgcaat gcacaaaata
    10681 tcaaatatat tttgtatgta agacaacaat tacaagcatt tccaatgtgt gtagaattta
    10741 ggcatcaatc atggtttagt gatgcattta aagaacaaac attggcattt ttaacagaac
    10801 atcaaatcat tcatgcagta gttgatgaac cacaagtgaa agatggcagt gtacctttag
    10861 tcaatcgaat cacaaatgaa attgcgtttg tacgttatca tggacgtaat cattacggtt
    10921 ggactaagaa agatatgtca gatcaagaat ggcgagatgt acgctattta tatgattata
    10981 atgagcaaga attaatagac ttggcacaaa aggcacaaat attagcacaa aaagctaaga
    11041 aagtttacgt catatttaac aataattctg gtggtcatgc agcaaataat gccaaaacat
    11101 atcagcgatt attgaatata gaatatgaag ggttagcacc acaacaatta aaattatttt
    11161 aagaggcgac gactatgtta ttaacaatta cattattagt actaatcggt ggtttgtcag
    11221 caatcatcgg atcaatcgtt ggtattgggg gcggtattat tatcgttcca acaatggttt
    11281 acctcggtgt tgaacatggg ttattacata atattacaac gcaaatagcg attgggacat
    11341 cgtctgtcat tctaattgtg acaggacttt cttcatcgct tggatatcta aaaacaaaac
    11401 aagttgatat taaaaatggc tctatctttt tatttggatt attaccaggt tcattgcttg
    11461 ggtcattcat tagtagatat ttaacatttg agtcatttaa tttatatttt ggaatctttt
    11521 taatctttgt agctatttta ttaatggtaa gaaataagat taaaccgttt aaaatatttg
    11581 ataaaccaaa gtatgaaaaa acttatgtag acgctaaagg taaaacatat cattatagtg
    11641 tgccaccatt gtttgctttt attacaacgt ttttaattgg tatattgaca ggtttatttg
    11701 gtattggagg tggcgcacta atgacgccac taatgcttat tgtatttaga tttccacctc
    11761 atgtagctgt tggaacaagt atgatgatga tattcttttc aagtgtcatg agttctatag
    11821 ggcacattgc tcaagggcac gtagcttggg gttatgcaat cattttaatt atttctagtt
    11881 attttggtgc gaaaatcggt gtcaaagtga atcaatcaat taagtcagat acggtagtaa
    11941 cattattgag aacagtaatg ttgttaatgg gtatatattt aattattcgt gcgttgattt
    12001 aatacaactt taaaaggagg acgtcaattt gaggcttaca atttatcata cgaacgatat
    12061 tcatagtcat ttacatgaat acgaacgcat caaagcatat atggcagaac aactgccacg
    12121 acttaatcat ccttctttat atgttgatct aggtgatcat gtagatttat ccgcacctat
    12181 aactgaagca actttaggta aaaagaatgt ggcattacta aatgaagcaa aatgtgatgt
    12241 tgcgacaatc ggtaataatg aaggaatgac catttcacac gaagctttaa atcaccttta
    12301 cgacgaagca aaatttatag tgacatgtag caatgttata gatgaatcag gtcatttacc
    12361 aaataatatc gtttcttctt atattaagga tatagacggt gtgaaaatac tattcgttgc
    12421 agcgacagca ccttttaccc cattttatcg tgcactagat tggattgtta ccgatccact
    12481 tgaatctata aaagaagaaa ttgaacatca acgaggtaaa tttgatgtat taatcgtgct
    12541 aagtcattgt ggcattttct tcgatgaaac attatgccaa gaattgcctg aaattgatgt
    12601 catttttggt agtcatacgc atcattattt tgaacatggt gaaatcaata atggtgtact
    12661 gatggcggca gctggaaagt atggtaatta tcttggagag gttaatttaa cttttgaggc
    12721 acataaagta gtacataaaa ctgcaaagat tattccttta gaaacattac ctgaagttaa
    12781 aacttcattt gaagaagaag gaaaaacgtt aatgtccaat ccagtaattc aacatccagt
    12841 agtgcttaaa cgtagtatga accacataac tgaagctgca tacttattag ctcaaagtgt
    12901 ttgtgagtat acacatgcac aatgtgctat catcaatgct ggcttactcg ttaaagatat
    12961 tgtaaaagat aaagtgacag aatatgacat tcatcaaatg ttaccgcatc cgattaatat
    13021 ggtaaggttt agactttctg gtgtgaaatt aaaagagatt atagctaaaa gtaataaaca
    13081 agaatatatg tatgaacatg cacaaggttt gggtttcaga gggaatatat ttggaggata
    13141 tattctttat aatttagggt acattcattc tacagggcgt tactatctga atggagaaga
    13201 aatcgaagac gataaagaat atgtactagg tacgatagat atgtatacgt tcggtcgtta
    13261 tttcccaaca ttgaaagaat taccaaaaga gtatttaatg ccagagtttt taagagatat
    13321 atttaaagaa aaattattgg aatattaaaa agtaagatta ttggattttc atttgtcatg
    13381 aatttcgata taatgtttaa agatacactt aacaggaggg tatgtgttgt tatggcgaca
    13441 aaaaacgagg aaatattacg taaaccggat tggttgaaaa taaaattaaa taccaacgaa
    13501 aactatacag gacttaagaa gatgatgagg gaaaaaaatc ttaatactgt atgtgaagaa
    13561 gctaaatgtc ctaatataca tgaatgttgg ggtgcacgtc gtacagcgac atttatgatt
    13621 ttaggtgccg tatgtacaag agcttgtcgt ttttgtgcgg ttaagacagg tttacctaat
    13681 gaacttgatt taaatgagcc tgaacgtgta gctgaatcag ttgaattaat gaacttgaaa
    13741 cacgttgtta tcactgctgt tgcgcgtgat gatttaagag atgctggttc aaatgtttat
    13801 gctgagacag tacgtaaagt tagagaaaga aatccattta caacgattga aattttacca
    13861 tcagatatgg gcggggacta tgatgcgtta gaaacattaa tggcttcaag acctgacatt
    13921 ttaaaccata atattgaaac tgttcgtcga ttaacaccga gagttcgtgc gcgtgcgact
    13981 tacgacagaa cattagagtt tttacgtcgt tcaaaagaat tacaaccgga tatcccaact
    14041 aaatcaagta ttatggttgg attaggtgaa actatagaag aaatttatga aacgatggat
    14101 gatttacgtg cgaatgatgt agatatttta acgattggtc aatatttaca accttcacgt
    14161 aaacatttaa aggttcaaaa atattacacg cctttagagt ttggtaaatt aagaaaagtg
    14221 gcaatggata aagggtttaa acattgccaa gctggacctt tagttcgtag ttcttatcat
    14281 gccgatgagc aagtaaatga agctgctaaa gaaaagcaac gccaaggtga ggcacagtta
    14341 aatagttaat atttaaccat taaaaaggca taaaggctta gtttgtacaa aacgaacgtg
    14401 tcatagaagt aatcattatt tttataaaac actaaaagta taaactgagc ctttcattgt
    14461 catagatagg tgaagaattt gataaaagta gatcaacatt actttgaatt aatagaaaat
    14521 tatcgcgaat gttttaatga agaacaattt attgctaggt attcagatat tttagataaa
    14581 tatgattaca tagttggtga ctatggttac gatcaattac gattaaaagg cttttacaaa
    14641 gattctaata aaaaagcaga gatgagtaaa cgtttttcaa atattcaaga ttacatattt
    14701 gaatattgta actttggttg tccttacttt gtattaagac atttgtctaa acaagaggtt
    14761 aaaaagttaa tcgaagaagt tcatccgtct gatgtgatag atgacgacaa taaacttcaa
    14821 gatgtgaaga ttaagccaac cattcaagat actgaacatt aataaaaccc ttagctagat
    14881 tgaaaatggg aatcatgcaa ttcaagcatg gacctgtaat ctagttaggg gtttttatct
    14941 ttaatgaatg acttcattta aatactcagt aatttcatcg ccttcttcag catttacacc
    15001 taaaatatga gcgatatagc cttcttcttt taaatcatca gtaccgataa taccgaattt
    15061 atttgtttgc atattaagta cgagtgtctt accataatgt ctatttgtat ggactaacat
    15121 taaatcatat cgaccatgct cgccaacaaa accaacaaac tgaacttgac tctcttcgtt
    15181 gtcatcatat aaatacatat caatcatttt gtagtgactc cttttaaaag tagtaaagtt
    15241 agtataacga caaatgaagt atactgcaaa attatgataa tatataagcg agaggtgaca
    15301 aggaatgtat tttgtagaca aagataaact aactcagaaa ttagcctatt tacaagcatt
    15361 aactgatgat tatcatgaga gtaagcacaa tcattatgca tttgaacgca ttgctcaaat
    15421 gttgatagaa tcatcggtag atatagggaa tatgattatc gatgcattta ttttaaggga
    15481 tcctggtaat tataaagatg tgattgatat attagaacta gaaaatgtaa ttaccaaaga
    15541 aacacagcag gcgattaata aaactgtcga tattcgtaaa caatttacat atgattacac
    15601 agccttagat attaaggtta tcatgccaat gtttgatgac gcattaccat attacaaaca
    15661 atttattaca gaagtaacga catttttaca tcaagaaaat gtaccagtaa cagcttttgg
    15721 taaaggagaa aatcaataat gaaacagtat aaagcgtatt taatcgattt agatggcaca
    15781 atgtatatgg gaacagatga gattgatgga gcaaaacaat tcatcgatta tttaaatgta
    15841 aaaggcattc ctcatttata cgtaactaat aattcaacga aaacacctga gcaagtaact
    15901 gaaaaattac gtgaaatgca tattgatgct aaaccagaag aggttgtaac gtcagcgtta
    15961 gccactgctg attatatttc agaacaatca ccaggagcat cagtatatat gttaggtggt
    16021 agtggtttaa atactgcgtt aaccgaagcg ggacttgtca ttaaaaatga cgagcatgtt
    16081 gattatgtag ttattggact tgacgaacaa gttacatatg aaaagcttgc gattgcaacg
    16141 ttaggtgtaa gaaatggagc aacatttatt tctacaaatc cagatgtgtc aattccaaaa
    16201 gagcgaggat ttttaccagg gaatggtgct attacaagtg ttgtaagtgt atcgacaggt
    16261 gtatcgccac aatttattgg taaaccagaa ccgattatta tggttaaagc attagaaatt
    16321 ttaggactag ataaatccga agttgctatg gtaggcgatt tgtacgatac cgatattatg
    16381 tctggtatta acgtaggtat ggatacgatt catgtacaaa caggtgtatc cacgttagaa
    16441 gatgtgcaaa ataaaaatgt gccaccaacg tattctttta aagatttaaa tgaagcaata
    16501 gctgaattag aaaaatagat atagtcattt tataaagtag gtgaattgat ttggtaaaaa
    16561 tagttgtttc gaggaaaatt ccagataaat tttatcaaca attaagtaaa cttggtgacg
    16621 ttgttatgtg gcaaaaatca ttagtgccta tgcctaaaga tcaatttgtg acagcacttc
    16681 gtgatgcaga tgcttgtttt atcacattaa gtgaacagat cgatgcagaa attttagcac
    16741 aatcaccaaa tttaaaagta attgcgaata tggctgtagg atatgacaac atcgatgttg
    16801 aaagtgcaac agcgaacaac gtggttgtca cgaatacacc aaatgtactt actgaaacaa
    16861 ctgcagaatt aggatttaca ttaatgcttg ctatagcacg tcgtattgta gaagctgaaa
    16921 aatatgtaga agcagatgca tggcaaagct ggggtcctta tttattgtca ggtaaagatg
    16981 tcttcaattc aactattgga atatatggta tgggagatat tggtaaagct tttgcaagaa
    17041 ggttgcaagg gtttaatact aaaattcttt atcataatcg atcaagacat aaagatgcag
    17101 aggcagacct taatgcaaca tatgtttctt ttgaaacgtt gttagcagaa agtgatttta
    17161 tcatctgtac agcgccactt acaaaagaaa cacatcataa atttaatgct gaagcatttg
    17221 cacaaatgaa aaatgatgca atttttatta atatcggtag agggcaaatt gtagatgaaa
    17281 cagcattaat caatgcacta gacaataaag aaatattagc atgtggttta gatgtattag
    17341 caaatgaacc aattgatcat acacatccat taatgggacg tgataatgta ctgattacac
    17401 cacatattgg cagcgcatca gtaacgacac gggacaatat gattcaatta tgtattaata
    17461 atatagaagc ggttatgaca aatcaggtag cacttactcc agtaaattga aaataagtat
    17521 ggtttttaat cattggtaaa acgagcaaag caattgttaa atatgctatg cttgacttgc
    17581 taatgtatat atttgcgctg atgataattc aataacatta taaactcgtc atattaatgt
    17641 gatgagttta tttgattttg acgtatataa caaaattgtt atatagactg taattgttta
    17701 ttgtttaaat aacctttaaa atgaatgatg ttctcaacaa agtgtatcat ttacaataat
    17761 tgagtgatga caaccaatta ctatgttgaa tctataaaat taaaattgaa tttcattatg
    17821 aatatcgata taatgaattg taaaaaacaa attttaaaac gtattttata ttgaacggtc
    17881 tttataaagg cgtttttact aagaacttta agaggtgcat tatgaaatct aaaagtaaac
    17941 agccacctaa taaatatgtt gaagcattca aaccatattt attaacacta ttgtatttgg
    18001 caatatttat tactttatat ttaatttatg gcagtggcga cacacacaat aacttcattt
    18061 ataatgagtt ctaatgaggg agacttaata tgacagatat tattaacaag ctgcaagcgt
    18121 ttgcggatac aaatccacaa agcattgctg ttagacacac aactgatgaa ttaacttatc
    18181 aacagttaat ggatgagtct agtaaattag cacatcgatt acaaggtagt aagaaaccga
    18241 tgattttatt cggtcacatg tcaccatata tgattgttgg gatgattggt gccattaaag
    18301 caggatgtgg atatgtacct gtagacactt caattcctga agaccgtatt aaaatgatta
    18361 ttaacaaggt tcaaccagag tttgtattta atacgactga tgaatcattt gaaagtttag
    18421 aaggcgaagt atttacaata gaagatatta aaacatctca agacccagta atttttgata
    18481 gtcagattaa agataacgac acagtataca caatctttac atctggttct actggggaac
    18541 ctaaaggtgt tcaaattgaa tatgcaagtt tagttcaatt tactgagtgg atgttagaac
    18601 ttaataaatc aggaaatgaa caacaatggc ttaaccaagc gccattttca tttgatttat
    18661 ctgtaatggc tatttatcca tgtttagcat caggcggtac attaaatctt gtagataaaa
    18721 acatgattaa taaacctaaa ttattaaatg aaatgctaac agcaacaccg attaacattt
    18781 gggtatcaac accatcattt atggaaatgt gtttattatt accaacgctt aatgaagaac
    18841 agtatggtag tcttaacgaa ttcttcttct gtggtgaaat tctacctcac agagcagcaa
    18901 aagcgttagt aagccgtttc ccaagtgcga cgatttacaa cacatatggt ccaactgaag
    18961 ctacggtagc agttacaagt attcaaatta cacaagaaat cttagatcaa tatccgacat
    19021 tacctgttgg cgttgaaaga ccaggcgcaa gattatctac gacagatgaa ggtgaacttg
    19081 ttatcgaagg tcaaagtgta agtttaggat acttaaaaaa tgaccaaaaa acagctgaag
    19141 tatttaattt cgatgacggt attcgtactt atcacactgg tgataaagcg aagtttgaaa
    19201 atggtcaatg gttcattcaa ggtcgtattg atttccaaat caaattgaat ggctacagaa
    19261 tggaattaga agaaattgaa acacaattac gccagtctga gttcgtaaaa gaagcgattg
    19321 ttgtacctgt atataaaaat gataaagtta ttcatttaat tggtgcaatt gtgccaacga
    19381 ctgaagctac ggacaatgca gaaatgacta aaaatattaa aaatgacttg aaatcacgct
    19441 taccagagta tatgattcct agaaagtttg aatggatgga acaattgcca ttaacttcaa
    19501 atggtaaaat tgacagaaag aaaattgcag aggtaattaa cggatgattc catatggtga
    19561 ttttacattc ttcttaattg ctttaattgc attattacca gtcattatac ttggattttt
    19621 aggtaagcga agttacattt ataatggcgt agttacagca tttatgattg tgttaatctt
    19681 ttcttctgat aaacataatc tgtttgacca aaagtattta agtgttcaat taattagttt
    19741 tattatttac gtcgtatggc aagttttatt gataatgttt tattatcatt caaaaccaaa
    19801 aaataattca ttttcaaaat ttgtaactgt aatggtttta tcaatattgc cattagcact
    19861 tgtgaaagtg ttacaaagta catggttagg tggacatcag attcacttcc atgaaagtaa
    19921 attaattgaa tttgttggtt tcttaggaat ttcttatgtt acattcaaaa gtgtgcagtt
    19981 aattatggaa attcgtgatg gttctatcaa agaaattaaa gtatggaaat taattcaatt
    20041 tatttcattc ttcccaacga tttcatctgg accaatcgat cgttacaaac gtttcgttaa
    20101 agacgataaa aaagtaccaa caggcaatga atatcgtgaa ttagtattaa aagcaattca
    20161 catgattatg cttggtttct tgtataaata tattgttgct tactttatta acacatatgc
    20221 aatcatgccg ttacaattag acttacatgg ctttgtcaat ttgtggttat atatgtacgc
    20281 atacagctta tatttattct ttgactttgc aggttatagt ttatttgcga tagcatttag
    20341 ttatttattc ggtattaaaa caccaccaaa cttcgataaa cctttcaaag cgaaaaatat
    20401 taaagatttc tggaatagat ggcatatgac attatcattc tggttcagag attgtattta
    20461 catgagatct ttattctaca tgtctcgtaa aaaattattg aagagtcaat ttgcaatgtc
    20521 taacgtggca ttcttaatca acttcttcat aatgggaatt tggcatggta tcgaagtgta
    20581 ttacattgtt tatggtttat accatgcagc attgtttata ggttatggct attatgaacg
    20641 ttggcgcaag aaacatccgc cacgttggca aaatggtttc acaacagcac ttagcattgt
    20701 gattacattc cactttgtaa catttggctt tttaatcttc tcaggtaaac ttatataata
    20761 aaggagaatt taattatgga atttagagaa caagtattaa atttattagc agaagtagca
    20821 gaaaatgata ttgtaaaaga aaatccagac gtagaaattt ttgaagaagg tattattgat
    20881 tctttccaaa cagttggatt attattagag attcaaaata aacttgatat cgaagtatct
    20941 attatggact ttgatagaga tgagtgggca acaccaaata aaatcgttga agcattagaa
    21001 gagttacgat gaaattaaaa ccttttttac ccattttaat tagtggagcg gtattcattg
    21061 tctttctatt attacctgct agttggttta caggattagt aaatgaaaag actgtagaag
    21121 ataatagaac ttcattgaca gatcaagtac taaaaggcac actcattcaa gataagttat
    21181 acgaatcaaa caagtattat cctatatacg gctctagtga attaggtaaa gatgacccat
    21241 ttaatcctgc aattgcatta aataagcata acgccaacaa aaaagcattc ttattaggtg
    21301 ctggtggttc tacagactta attaacgcag ttgaacttgc atcacagtat gataaattaa
    21361 aaggtaagaa attaacattt attatttcac cacaatggtt tacaaaccat ggtttaacga
    21421 atcaaaactt tgatgctcgt atgtctcaaa ctcaaattaa tcaaatgttc cagcagaaaa
    21481 acatgtctac tgaattaaaa cgtcgttatg cacaacgttt attacagttt ccacatgtac
    21541 acaataaaga atacttgaaa tcttatgcta aaaaccctaa agaaactaaa gatagttata
    21601 tttctggttt taaagagaat caattgatta aaatagaagc gattaaatca ttgtttgcaa
    21661 tggataaatc tccattagaa catgttaaac ctgctacaaa accagacgct tcttgggatg
    21721 agatgaaaca aaaagcagtt gaaattggta aagctgatac tacatcgaat aaatttggta
    21781 ttagagatca atactggaaa ttaattcaag aaagtaagcg taaagttaga cgtgactacg
    21841 aattcaatgt taattctcca gaattccaag atttagaatt acttgtaaaa acaatgcgtg
    21901 ctgctggtgc agatgttcaa tatgtaagta ttccatcaaa cggtgtatgg tatgaccaca
    21961 ttggcatcga taaagaacgt cgtcaagcag tctataaaaa aatccattct actgttgtag
    22021 ataatggtgg taaaatttac gatatgactg ataaagatta tgaaaagtat gttatcagtg
    22081 atgccgtaca catcggttgg aaaggttggg tttatatgga tgaacaaatt gcgaaacata
    22141 tgaaaggtga accacaacct gaagtagata aacctaaaaa ttaaaataca aatagcacat
    22201 aactcaacga ttttgattga gcgtatgtgc tatttttata ttttaaattt catagattag
    22261 aatagtaata tgcgcttgga tatgtggcaa taataaaata attaatcaga taaatagtat
    22321 attataactt tcccatcagt ccaatttgac agcgaaaaaa gacaggtaat aactgattat
    22381 aaataattca gtattcctgt ctttgttgtt attcataata tgtgctgtta acttaatatc
    22441 tttatattag aatacttgtt ctacttctat tacaccaggc acttcttcgt gtaatgcacg
    22501 ctcaatacca gctttaagag tgattgtaga acttgggcat gtaccacatg caccatgtaa
    22561 ttgtaattta acaataccgt cttccacgtc aatcaatgag cagtcgccac catcacgtaa
    22621 taaaaatggg cgaagacgtt caataacttc tgctacttga tcaaacatcg ttgtatcttc
    22681 actaggcatc aggcaagtct cctttcgaga gatgaatttg ataatcttta ttagtatatt
    22741 ataatagata gtgtaataaa aatctatcaa accaatgggg gataaatata tggagcacgt
    22801 gagtgtggta gtatatgggg cagatgttat atgtgcaagt tgcgttaatg cgccaacatc
    22861 gaaagatatt tatgactggc tacagccgct attaaaaaga aaatacccaa atataacatt
    22921 taaatatacg tatatagata ttacaaaaga taatgacaac ttaacagatc atgatttaca
    22981 atttattgaa agaatagaac aagatgaact attttatcca ttaattacaa tgaacgatga
    23041 atatgtagca gatggttata tacaaacaaa gcaaatcact cgatttatag accaaaagct
    23101 tgtgaatgaa taatatacac ataataaaaa gcaatgtcag taatagtgtg aactgacatt
    23161 gctttttaat ttttaaccat tatgatattt atataaccaa agtacgccgg attttaaaat
    23221 agaagcgagt cgtccagtta cagtgcgatc catgatatat gcaaaacctt gtttatctcc
    23281 taatgaccca acgatacctt gtacctttag ttcgggcatt ttgtcaggta atggttcatt
    23341 tagccattgc tttttaagca catcggcaat ttgatcacct tgaacttcgg ctaactgagc
    23401 acttggcgca tgtggtaaat cagcacaatc accaactaca tagacgttac gatatgttgg
    23461 tacttgatga tactggttaa ctatcacgcg tccattacta tttatgtcaa tcggcaagtt
    23521 acgaacaact tcaacaggtt gaattcctgc tgtccataca actaaatcaa tatctttagg
    23581 ttcatcacag ttatatattt taccaggttc aactttatta atatttgaat ttggaacaac
    23641 ggtaacatta tttttggcga accatttcgc aacatactta cttaattttt ctggaaaatt
    23701 tcttaaaatt cgtggcccac ggtcataaag atatatttcc aagtctgatc tactttctct
    23761 taattcgctg gcaagttcta tgccgcttaa tccagcacca acgataccaa ctttagcacc
    23821 ttctggtagt tcactaatac tatggaaagt atcccgagcc tttgagagtg tttgaatact
    23881 atgtgtatat tcttcggctc ctggaacgtt atgatattta tcttcacatc ctaaaccaat
    23941 gattagctca tcataatcaa ttttagaatt accgactgag acaatttgag catctaaatc
    24001 tatgtcgtta atttcaccat aaaccgtatt cacttgtgga tgattaggga atttcatgcg
    24061 aacatcttta tctgatttcg tgcccgcagc taaagcataa aattctggtt tcaatccatg
    24121 aaatggcata cgatcaacta atgtgactgt ataatcttgt ggtaaagatg tagttaaaat
    24181 gcgtgacatg atacgcatat taccatatcc gccgcctaac aaaactaagt ttttcataat
    24241 gaagtacccc ttttatatgt taatatttac tttaattttg aaaagatcaa agtgcataga
    24301 tatatttgtt aatgaacagt tataaaatgc aagtgtcttt gattcatcaa taacccctaa
    24361 aaaagtaaat atgtatttat atgcttatta tatatttttt tgaaaatgac tacaaataaa
    24421 tatttgtact aactaaggca ctattacata actgggataa gaaacatcag ttgttgctaa
    24481 ttgagcacat catgttaaaa taccagtttt aaaatgctat aatattgtaa caaatgaaat
    24541 aagaaggtga agtatgaatc cgatcgtaga attttgtctc tctaacatgg caaaaggtgg
    24601 agattatgtt tttaatcaac tggaaaatga cccagatgtc gatgtgttag agtatggttg
    24661 cctgacacat tgtggtatat gttcagccgg gttgtatgct ttagtaaatg gtgatattgt
    24721 tgaaggtgat tcgccggaag aattattaca aaatatatat gcacatataa aagaaacttg
    24781 gattttttaa ggaggagtta tcatgccaac agttatatta acagaagcag ctgcctacga
    24841 agtaaaagat atgcttaaag caaatgaaat gccagatggc tatttaaaaa ttaaagtgaa
    24901 tggtggcggg tgcactggtt taacatacgg tatgggtgca gaagaagcgc ctggtgaaaa
    24961 tgatgaagtc ttagaatact ttggattaaa agttttagta gacaaaaaag atgcacccgt
    25021 attaaatggt acgactattg attttaagca atcattaatg ggtggcggtt tccaaatcga
    25081 caatcctaat gcaattgcat catgtggctg tggtagttca tttagaactg caaaagttgc
    25141 aggtaatcct gaaaactgct aattattaag gttaacccaa ttttttggat acaaattgat
    25201 atcaattacg attagggaca tatttgatta tgtcctattt ttgcgtaaag atattttgtt
    25261 ttattaaaaa gtttattaaa aattaagaat ctgactatta atagtatttt aaatgatcgt
//
LOCUS       DALMNS010000030        24719 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.030, whole genome shotgun sequence.
ACCESSION   DALMNS010000030 DALMNS010000000
VERSION     DALMNS010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 24719)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24719)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24719
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.030"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(95..1302)
                     /locus_tag="O6Y56_001040"
                     /pseudo
     CDS             complement(95..1302)
                     /locus_tag="O6Y56_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999124.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
     gene            complement(1412..1546)
                     /locus_tag="O6Y56_001041"
     CDS             complement(1412..1546)
                     /locus_tag="O6Y56_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574316.1"
                     /translation="MCHGIKQYPFKVFIISVNYFEGIVFCEKIYGVLRFISFYTFYKL
                     "
     gene            complement(1570..2952)
                     /locus_tag="O6Y56_001042"
     CDS             complement(1570..2952)
                     /locus_tag="O6Y56_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HDB5574317.1"
                     /translation="MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNN
                     IKMRKMVPWAIGFFILILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTK
                     DNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV
                     SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIP
                     GTYRIPAMKSTENGDFAGHLKFDFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSK
                     KVTINDREMAFSSSKTYGPYPQNKDITISASGKAKGKTFTTQTKTIKASDLKYNTEIT
                     LNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSS
                     FYDDVKKRVSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQD
                     RLQLIKTSEK"
     gene            complement(3192..3647)
                     /locus_tag="O6Y56_001043"
     CDS             complement(3192..3647)
                     /locus_tag="O6Y56_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDB5574318.1"
                     /translation="MVKHLQDHIQFLEQFINNVNALTAKMLKDLQNEYEISLEQSNVL
                     GMLNKEPLTISEITQRQGVNKAAVSRRIKKLIDAKLVKLDKPNLNIDQRLKFITLTDK
                     GRAYLKERNAIMTDIAQDITNDLNSEDIENVRQVLEVINHRIKTYSNHK"
     gene            3842..4810
                     /locus_tag="O6Y56_001044"
     CDS             3842..4810
                     /locus_tag="O6Y56_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDB5574319.1"
                     /translation="MLLNLLLIFILIVICPLIFNYTLTLNLTCYILVVISIFLSLIYS
                     IMTYTFPWSMFVTFIIISIIMLFKHRYLFSHTSSRLFIKKLLSFSYKFVLYTSALLFI
                     STIQSPIVKGLSMWLAILCLSLLLTFICYLVWTVSYRHRSYNKEVDIIIVLGAGIFTE
                     FVTPMLAARLDRALDIYQQQASATKIIVSGGQGPDEPIPEALAMQRYLIAHGVDKTDI
                     LMESHSINTYTNFLYSKQIINNLYHKAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGS
                     HTPYHFFLHVLIKDYLGVMYQYRLLLTLYCSSSWFICLYAAFMYNS"
     gene            complement(5041..5706)
                     /locus_tag="O6Y56_001045"
     CDS             complement(5041..5706)
                     /locus_tag="O6Y56_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574320.1"
                     /translation="MALVVKDIVKNFGEGLSETKVLKGINFEVEQGEFVILNGASGSG
                     KTTLLTILGGLLSQTSGTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIE
                     QLTLVGREAGMTKQQSSKRAMQLLKNIGLEDRLNVYPHQLSGGEKQRVAIMRAFMNNP
                     KIILADEPTASLDADRATKVAEMIRQQIKEQQMIGIMITHDRRLFEYADRVIELEDGK
                     ITD"
     gene            complement(5706..6761)
                     /locus_tag="O6Y56_001046"
     CDS             complement(5706..6761)
                     /locus_tag="O6Y56_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5574321.1"
                     /translation="MKLAIKEIMFYKFRYILITLIILLLSIMVLFISGLAQGLGRENI
                     SLFEHFDNDEYVVQKMKEPQIEKSQLSDTQQNQIKKVIHQEPYKMNVQTLKLSNKEQD
                     VITMNDVKQQRLQLKKGDYPKNAHEVAINDKLAADNIRVGDRLHFKNNSTSYRVSGIL
                     NDTMYAHSSIVLLNDNGFNALNKVNTAFYPVKNLTQQQRDELNKINDVQVVSEKGLTG
                     NIASYQAEQAPLNMMIVSLFAITAIVLSAFFYVMTIQKISQIGILKAIGIKTRHLLSA
                     LVLQILTLTIIGVGIAVIIIVGLSFMMPVTMPFYLTTQNILLMVGIFILVAILGASLS
                     FIKLFKVDPIEAIGGAE"
     gene            6897..7571
                     /gene="hssR"
                     /locus_tag="O6Y56_001047"
     CDS             6897..7571
                     /gene="hssR"
                     /locus_tag="O6Y56_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding heme response regulator HssR"
                     /protein_id="HDB5574322.1"
                     /translation="MVQCLVVDDDPRILNYIASHLQTEHIDAYTQPSGEAALKLLEKQ
                     RVDIAVVDIMMDGMDGFQLCNTLKNDYDIPVIMLTARDALSDKERAFISGTDDYVTKP
                     FEVKELIFRIRAVLRRYNINSNSEMTIGNLTLNQSYLELQVSNKTMTLPNKEFQLLFM
                     LATRPKQIFTREQIIEKIWGYDYEGDERTVDVHIKRLRQRLKKLNATLTIETVRGQGY
                     KVENHV"
     gene            7564..8937
                     /gene="hssS"
                     /locus_tag="O6Y56_001048"
     CDS             7564..8937
                     /gene="hssS"
                     /locus_tag="O6Y56_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000477337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme sensor histidine kinase HssS"
                     /protein_id="HDB5574323.1"
                     /translation="MFKTLYARIAIYSITVILFSALISFVLTNVYYHYNLKASNDAKI
                     MKTLKEARQYEQSAKPTHIQQYFKHLGQMNYQIMTVDQKGHKTFYGEPFREDTLSQNA
                     INNVLNNKDYHGIKDKPFALFVTGFFDNVTDNTVGINFKTKDGSIAVFMRPDIGETFS
                     EFRTFLAVLLMLLLFISISLVIASTYSIIRPVKKLKLATERLIDGDFETPIKQTRKDE
                     IGTLQYHFNKMRESLGQVDQMRQHFVQNVSHEIKTPLTHIHHLLSELQQTSDKTLRQQ
                     YINDIYTITTQLSGLTTELLLLSELDNHQHLLFDDKIKVDQLIKDIIRHEQFAADEKS
                     LIILADLESINFLGNQRLLHQALSNLLINAIKYTDVGGAIDIALQHSHNNIIFTISND
                     GSPISPQAEARLFERFYKVSKHDNSNGLGLAITKSIIELHHGTIQFTQSNEYVTTFTI
                     TLPNNSH"
     gene            9100..9543
                     /locus_tag="O6Y56_001049"
     CDS             9100..9543
                     /locus_tag="O6Y56_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDB5574324.1"
                     /translation="MMKLNLFINANETESYIDIHAPKMNDHVQSIINAVNDLDKSHTL
                     VGYIDKEIHIIHISDVITFQVINKNVTAITSNQKFKLKLRLYELEKQLPQHFIRISKS
                     EIVNKYCIEKLLLEPNGLIRMYLKDAHYTYSSRRYLKSIKERLSI"
     gene            9540..9995
                     /locus_tag="O6Y56_001050"
     CDS             9540..9995
                     /locus_tag="O6Y56_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3021 domain-containing protein"
                     /protein_id="HDB5574325.1"
                     /translation="MKNLKNSLFISLIIGLTLSLFFSMLFADGKYYPLNPQSTIGILY
                     YTHFTETTVMLISIILWLLIGVVFFLGDFIFKYTDWGITKATIVHFITTYVGFLPLAI
                     LAGWFPLTINYLIIFTIIFIVVYTLIWIIQFFRNKNYVDTINEQLKQLK"
     gene            complement(10173..10736)
                     /locus_tag="O6Y56_001051"
     CDS             complement(10173..10736)
                     /locus_tag="O6Y56_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000372852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /protein_id="HDB5574326.1"
                     /translation="MDQTAFTDSRVTKTINRIHDGMINLLKTKAYNDITVKDICEKSQ
                     ISRTTFYTHYKTKDDFIYSYLNTLLKEAKKKFLKSETLTQAIFLKKMVYFWLSEGQLI
                     LMLLGDESAYKLHQVIKKSLQQRIEINVVPVLNTKMLTTKEKYFLLIFMSNAIIGVLQ
                     DWVKRGYKESPKEVAEIMNKIFENAFR"
     gene            10870..11598
                     /locus_tag="O6Y56_001052"
     CDS             10870..11598
                     /locus_tag="O6Y56_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000388431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574327.1"
                     /translation="MDATIAKLDKVVKTYNKHHVLNEISMSINKGELLGLIGPSGSGK
                     TTTIKCLLGMEKIDSGSAEIFAHKMPNRKALNRLGYMGQTDALYENLTAYENLEFYGR
                     LSGLKGNLLKDNIEKHIVLVNLEQALNKKVAQFSGGMKRRLSLAITLLAEPELIILDE
                     PTVGIDPKLRQQIWQQFKQMTKNGKSVVITTHVMDEAERCDKVGLIVDGRIFAIDTPT
                     NLKQRFNVDTIEAVFIKAEEVRQS"
     gene            11595..12677
                     /locus_tag="O6Y56_001053"
     CDS             11595..12677
                     /locus_tag="O6Y56_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000696075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5574328.1"
                     /translation="MKILAIVRRVLKEMLRDKRTLALMFLAPILILTLMYFIFNGDEN
                     DLKIGIDTSVSSNITKQLPSSDIKTQTFHSHENIKSKIENNHLDGYIYQENQTLHVIY
                     TNEDPNKSNMIKQMIGKAIQQDKISSIKHLIEKAPPTMKAPNKQDIKISHSYLYGNSD
                     STYFDKMFPILMGFFVFLFVFLISGIALLRERTTGTLERVLSTSIRRSEIVLGYLIGY
                     GIFAIIQTLIIVLFSIYLLNINLAGSLWYVILINICLAITALSMGIFISTFANSEFQM
                     IQFIPLVAVPQVFFSGIFPLENMPDWLGNIGYIFPLRYAGDALTNVMIKGQGWSNIWF
                     DLLILMIFIMAFIILNIVGLKRYRQV"
     gene            complement(12804..14282)
                     /gene="mqo"
                     /locus_tag="O6Y56_001054"
     CDS             complement(12804..14282)
                     /gene="mqo"
                     /locus_tag="O6Y56_001054"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HDB5574329.1"
                     /translation="MTTQHSKTDVILIGGGIMSATLGTLLKELSPEKNIKVFEKLSQP
                     GEESSNVWNNAGTGHSALCELNYTKEGKDGTVDCSKAIKINEQYQISKQFWAYLVKTG
                     QLDNPDRFIQAVPHMSFVIGEDNVAFIKSRVATLKKSVLFEKMKLSQDEEEMKSWVPL
                     MIEGRKSDEPIALTYDETGTDVNFGALTAKLFDNLEQRGVGIQYKQNVLDIKKQKSGA
                     WLVKVKDLETNETTTYESDFVFIGAGGASLPLLQKTGIKQSKHIGGFPVSGLFLRCTN
                     QEVIDRHHAKVYGKAAVGAPPMSVPHLDTRFVDGKRSLLFGPFAGFSPKFLKTGSHMD
                     LIKSVKPNNIVTMLSAGIKEMSLTKYLVSQLMLSNDERMDDLRVFFPNAKNEDWEVIT
                     AGQRVQVIKDTEESKGNLQFGTEVITSDDGTLAALLGASPGASTAVDIMFDVLQRCYR
                     DEFKGWEPKIKEMVPSFGYRLTDHEDLYHKINEEVTKYLQVK"
     gene            complement(14664..16262)
                     /locus_tag="O6Y56_001055"
     CDS             complement(14664..16262)
                     /locus_tag="O6Y56_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDB5574330.1"
                     /translation="MLVNTFNPFDNLLLSSLIAAIPIVLFLLCLTVFKMKGIYAAITT
                     LVVTLLIAIPFFKLPVGIASGAVVEGFFQGIIPIGYIVMMAVLLYKITVESGQFLTIQ
                     DSITNISQDQRIQVLLIGFAFNAFLEGAAGFGVPIAICALLLTQLGFNPLKAAMLCLV
                     ANAASGAFGAIGIPVGVVETLKLPGDVSVLGVSQSATLTLAIINFIIPFLLIFIIDGF
                     RGVKETLPAILVVSITYTLTQGLLTVFSGPELADIIPPLLTMLALAVFSKKFQPKHIY
                     RVNKDEEIEPAKAHSAKAVLHAWSPFIVLTVIVMIWSAPFFKNLFLPNGALSSLVFKF
                     NLPGTVSEVTHKPLVLTLNIIGQTGTAILLTIIITILMSKKVNFKDAGRLFGVTFKEL
                     WLPVLTICFILAISKITTYGGLSAAMGQGIAKAGNVFPVLSPILGWIGVFMTGSVVNN
                     NSLFAPIQASVAQQIGTSGSLLVSANTVGGVAAKLISPQSIAIATAAVKQVGKESELL
                     KMTLKYSVCLLIFICIWTFILSLL"
     gene            16579..18252
                     /locus_tag="O6Y56_001056"
     CDS             16579..18252
                     /locus_tag="O6Y56_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDB5574331.1"
                     /translation="MIKQINVSNMQKFESQLMKAHSEGYTHVVPYANEIMIYQSMLDA
                     VQLYPKSIVVDYTVDGQYKNDCHYFGQSSINIADWAQNNNYYPNLIYAIQQTLDLIHY
                     YPVETIFDLALLTLLKGDLSNDGHVVFDFKAPLATSASIWETIKTIEDFDMMSQFYLN
                     KMAYIDHHPIPFRNLFIEDSEQLNSPDNWLYSTKFMLPKWLYKIAKQRADNKQLQNLG
                     LYTKQPNVLKDHIVFIGDHHQYIGNSKYLFTYFVKHNPMTACYFVTDDRRGPHFISPK
                     SEKADELINSARVVLVENDIPETLQPNGTLIQLHQGTPIMQLFLDSKEPIKNIETPFY
                     RAKRYNRWLQFDYVIHSADDISHFYQTAFPSHQANVLAYGNPKHQYLLQKRNESTTQQ
                     QYKKSFKINDQKPVLLYAPIGLVSAQQLPLSDALFKAYHVVVQGVDETMLPEEALVAP
                     KYLSAQDLILMSDVVITDYSNIIFDAMAIDKTVALYTPNHSQYIESQGVNEDIWRHLS
                     KIWYTDRQLLINNLISQAIPVIKYPQIQHKEQPLESISQLILSKMTSNQ"
     gene            complement(18407..19036)
                     /locus_tag="O6Y56_001057"
     CDS             complement(18407..19036)
                     /locus_tag="O6Y56_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574332.1"
                     /translation="MKRLVTGLLALSLFLAACGQDSDQQKDSNKEKDDKAKTEQQDKK
                     TNDSSKDKKDNKDDSKDVNKDNKDNSANDNQQQSNSNATNNDQNQTNNNQSSNNQANN
                     NQKSSYVAPYYGQNAAPVARQIYPFNGNKTQALQQLPNFQTALNAANNEANKFGSNNK
                     VYNDYSIEEHNGNYKYVFSFKDPNANGKYSIVTVDYTGQAMVTDPNYQQ"
     gene            complement(19350..19865)
                     /locus_tag="O6Y56_001058"
     CDS             complement(19350..19865)
                     /locus_tag="O6Y56_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5574333.1"
                     /translation="MAGIIKEISKQDASELVELATSTFYDTFGSYYDDKDFEQFFKDN
                     YTVEKFTQEINHVDSFHYFYQEDGANVGYIKMNINSAQTEEMGETYLEVQRIYFLKDF
                     QGGGRGSQLIELAEKIAQEHNKHKIWLGVWEHNPRAQAFYKRHGFKVVGEHHFQTGDV
                     TDTDLIMEKEV"
     gene            20052..21056
                     /locus_tag="O6Y56_001059"
     CDS             20052..21056
                     /locus_tag="O6Y56_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000573244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDB5574334.1"
                     /translation="MIETFKAFVIDKDESGKVTPTFKQLSPTDLPKGDVLIKVHYSGI
                     NYKDALATQDHNAVVKSYPMIPGIDLAGTIVESEAPGFEKGEQVIVTSYDLGVSHYGG
                     FSEYARVKSEWIIKLPDTLTLEESMIYGTAGYTAGLAIERLEKVGMNIEDGPVLVRGA
                     SGGVGTLAVLMLNELGYKVIASTGKQDVSDQLLELGAKEVIDRLPVEDDHKKPLASST
                     WQACVDPVGGEGINYVTKRLNHSGSIAVIGMTAGNTYTNSVFPHILRGVNILGIDSVF
                     TAMKLRQRVWRRLAKDLKPENLHEIKQVITFDELPEQLNKVIKHENKGRIVIDFGVDK
                     "
     gene            complement(21102..21503)
                     /locus_tag="O6Y56_001060"
     CDS             complement(21102..21503)
                     /locus_tag="O6Y56_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000241591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5574335.1"
                     /translation="MVKVTYDIPTCEDYCALRINAGMSPKTREAAEKGLPNALFTVTL
                     YDKDRLIGMGRVIGDGGTVFQIVDIAVLKSYQGQGYGSQIMEHIMKYIKNVSVESAYV
                     SLIADYPADKLYAKFGFMPTEPDSGGMYIKY"
     gene            complement(21539..22573)
                     /locus_tag="O6Y56_001061"
     CDS             complement(21539..22573)
                     /locus_tag="O6Y56_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDB5574336.1"
                     /translation="MKDVTIIGGGPSGLYASFYAGLRDMSVRLIDVQSELGGKMRIYP
                     EKIIWDIGGIAPKPCHEILKDTIKQGLYFKPEVHLNERVVDIRKKAERHFEVETEAGK
                     IYTSKAVIIAIGAGIINPKQLDVKGVERYQLTNLHYVVQSYRRFKDKDVLISGGGNTA
                     LDWAHDIAKIAKSVTVVYRKEDVSGHEAMKTLVTDLNVKLCPKTRIKYLVGNDDETHI
                     SEVVLEHVESGDTHTVKFDDVIISHGFDRCNTLLSETSSKLDMHDDCRVKGFGNTTTS
                     IPGIYACGDIVYHDAKSHLIASAFSDGANAANLAKTYIQPDANAEGYVSSHHEVFKEA
                     NKTIVNKHLY"
     gene            complement(22584..22700)
                     /locus_tag="O6Y56_001062"
     CDS             complement(22584..22700)
                     /locus_tag="O6Y56_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574337.1"
                     /translation="MANYAIYFNNININSIMSLNDNNYQFERVNERNEYRES"
     gene            complement(22805..23236)
                     /locus_tag="O6Y56_001063"
     CDS             complement(22805..23236)
                     /locus_tag="O6Y56_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2871 domain-containing protein"
                     /protein_id="HDB5574338.1"
                     /translation="MRRLLYSFLFYMIIGLFSGFFYRELTKAYDFTGTTQLSLVHTHT
                     LILGMFMFLILLPLEKLFKLSSYYLFNWFFYVYNIGVIVTIGMMVTKGFFQVTGKSYS
                     PEAFAGFAGIGHTGMLAGLLLLFFLLRQAILKEPRDESFKK"
     gene            complement(23442..24719)
                     /locus_tag="O6Y56_001064"
     CDS             complement(23442..24719)
                     /locus_tag="O6Y56_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhgE/Pip domain-containing protein"
                     /protein_id="HDB5574339.1"
                     /translation="MNIFKNKLLWIAPIATMIILVIFSLAFYPAYNPKPKDLPIGILN
                     EDKGTTIQDKNVNIGKKLEDKLLDSDSNKIKWVKVDSEKDLEKDLKDQKIFGVAIIDK
                     DFSKDAMSKTQKVVMDSKKEEMQQKVASGEIPPQVVQQMKQKMGNQQVEVKQAKFKTI
                     VSEGSSLQGSQIASAVLTGMGDNINAQITKQSLETLTSQNVKVNAADINGLTNPVKVD
                     NEKLNKVKDHQAGGNAPFLMFMPIWIGSIVTSILLFFAFRTSNNIVVQHRIIASIGQM
                     IFAVVAAFAGSFVYIYFMQGVQGFDFDHPNRIAIFVALAILGFVGLILGVMVWLGMKS
                     IPIFFILMFFSMQLVTLPKQMLPESYQKYVYDWNPFTHYATSVRELLYLNHHIELNST
                     MWMFIGFMIFGAVSSLVSAIVRKHSTKRTEVPS"
BASE COUNT         8238 a         4388 c         3465 g         8628 t
ORIGIN      
        1 tttttatttt tgatgctaaa ttcataggtc tatgaatagc tcatgttttg ttttttaatt
       61 tttcaattca atataataga agaaactatg tttatcatcg atttgtttta aataccctca
      121 tattataaat ctgtaaaata attaatataa ctgctgtagc tataataata attatgtaag
      181 gtataggatt atcttcacct tttatcccca ctaatggcga tgcaacacca ccaaataaaa
      241 actgcactaa tcctaataaa cttgatgaac tccctctacc actactactt tcatccatag
      301 ctattgtaaa accaagtgtc gcaacacctg tcactggtgc tattaaaatg ataaatccta
      361 tcgctaaaat ccaaaagttc caatgattaa gcaatacaat cgtcactaaa attacaccga
      421 taatctgaat catcgtcatg cctctcatca atttttgtga gtctataaaa tcaacaagat
      481 aaccagtaag ttgacttgat ataatgagcg taataccaat tcccgcaaac atccaactaa
      541 attgtattgc agtcatgcca taaatttttt gaataataaa cggagacgca gaaatataag
      601 taaataatat tacaaatgtc ataccttgaa tgagcattgg taatacaaac cgtggcgtct
      661 tcaataatat tttgaagttt ttaaacattg tctttaatcc actacttgac tcacgatttg
      721 tcactgttaa tgattcaggt acttttaata aagaacctat gaccatgacg aagccaaaga
      781 tagtcagaat gacaaagacc atacgccaga cagaataatt taaaattatg ccccctattg
      841 ttggcgcaac aactggtgca ataccattaa caagcatcaa taatgccata aacttagtta
      901 gttcattacc actatacata tcacttgcta tagctcttga aataactgct gctgctccac
      961 ctgtcactcc ttgaagaaat cttaatgcaa ccatcagcca aatattatgt acaaaaacaa
     1021 tacctaaact cgctaatgta aaaataatca tagctataat aagcggcttt tgcgcccagt
     1081 tgaatctgaa attggaccag caaacaaatt accaaacgct aaaccaatca taaacatcga
     1141 taatgttaat tgtgcgttag acgtcgttgt ttgaaaatcc tgtctaatat ctggtaatcc
     1201 aggcaaaaac atatctattg ataatgctcc aatggccgtc aaagatccta aaataataat
     1261 aaatatcggt gaacgcttgt taaaacgctt taaatcattc actatatttc ctcctttata
     1321 aaatgattag tttataacta tcacgaacag aaactaattt taaatatgct cttttatata
     1381 ttagcattac tcacaagttt catgaacatc attacaactt ataaaaggta taaaatgata
     1441 taaacctcag cactccataa attttttcac aaaaaacaat cccttcaaag taatttacac
     1501 taattataaa tactttgaaa ggatattgtt ttattccatg acacatgcat cttatttaag
     1561 ttttatactc tatttttctg atgtcttgat taattgcaag cggtcttgcg aaccttgttc
     1621 aagctcatat tctttatcta cttgcttacc gttttcattt attaatctta cggttgcggt
     1681 aatcttatca ccatgttttt cggcatctat aatttgtggt gaactaatca tcattaaact
     1741 tcctttagat acacgcttct ttacatcatc ataaaaagat gatccttttt ttatatatga
     1801 cgatacaaaa tcaaaatccg actgattaaa cgcagcatta ttcgctaaag aatatccagc
     1861 aaagaattct atcaatttgt tcttcaagct gttttcttct ttttctttct tttcaacata
     1921 gtcttcgata tcttcactgt caaaattcaa agttatttct gtattgtatt ttaaatcgct
     1981 ggctttaatc gtcttcgtct gtgttgtaaa tgttttacct ttcgctttac ctgaagctga
     2041 aatggtaata tctttatttt gtggatatgg accatacgtt ttggaacttg aaaatgccat
     2101 ttcacggtca tttatagtta cttttttaga actatcattt aattttgtat cgccttttaa
     2161 agttacagat atatttgctt cttcaaaatc ttcagtaaca tctaccgttt cagaattact
     2221 ttgtctaaaa tcaaatttta aatggcctgc aaaatcaccg ttctcagttg atttcatagc
     2281 tggaattcta tatgtccccg gtataaaatt acctattggc gtcactttat ttgcttcagc
     2341 tataaccatc tttttcttac caccagattt aaactcatat tttgtttttt ctttcggttt
     2401 aacaattggt tgcttggtag gtgcagtaaa gctcatatta tcgaaaaaga tataacgtgt
     2461 gccattttta cttacacgta atatattttg accagatctg gtttgaatat aagaagctac
     2521 gctggtctta ctcttattca atttatgtac cgtattttta aggtcgctga caaattgctt
     2581 aagcccaact tcatctttga tatagttaat gtatactttc gcttcttcag aatctacttt
     2641 attatcttta gtacttaata atgttgctac tttttgttta tcattattct caatcgcatt
     2701 cactaatatt ttagtttgcg cttcaggtga attgaagttt cttagtaaaa agaacaatat
     2761 aataattaag attaaaatga aaaaaccaat tgcccaaggc accatttttc tcatcttgat
     2821 gttattagtt tgtatatctt catcggttga ctttctatat aatgcttgac gactatcaaa
     2881 tttatgtcca cattgtgtac atatctgtac atcatcttgt gcttgttgtc cgcacttcgg
     2941 gcaagatttc atattttcac ctcaattctg ttcctcttca attgttatat gtatatcaca
     3001 aaaattattt tattatttta ccattattat tttacaaata ttatcccaag aatacaattc
     3061 aagaaatgat taactttact ttagaattgt accttattac attatttatg aaagtactct
     3121 ctcaattata actaaaaaga aggtgttcaa tacatacata tttagtctta tatttgaaca
     3181 ccttcaaaaa cctatttatg attgctatat gttttaatgc gatgattgat gacttctaat
     3241 acttgcctta cattttcaat atcttcagaa tttaaatcat tagtaatatc ttgcgcaata
     3301 tctgtcataa tcgcattacg ttctttcaaa tatgctctac ctttgtcagt taaggttatg
     3361 aatttcaaac gttgatcaat atttaaattt ggtttatcta acttaactaa tttagcatcg
     3421 attaactttt taattcgtcg gcttactgca gccttattta caccttgtct ttgcgtgatt
     3481 tcactaattg tcaaaggttc tttatttaac atacctaata cgttagactg ctctaatgaa
     3541 atttcatatt cattttgtaa atctttcaac atttttgcag ttaatgcgtt aacgttattt
     3601 ataaactgct ctaaaaattg aatatggtct tgtaaatgtt ttaccataat tatttctccc
     3661 taattactat ttttataaag tatcctcagc aatcattgta tcgcacatct aaaaaacaca
     3721 aaaatattga ctcatatata atataacaaa ttaagactta catgttgcta cgttctcctt
     3781 gctttaataa attaaatcat ctacatttat atttaatatt tattataagc gaggtgtcag
     3841 tatgttattg aatttattat taatatttat acttatcgtt atttgtccgt taattttcaa
     3901 ctatactctg acgttaaatt taacatgcta catcttagtt gtcatatcga tatttttgtc
     3961 actcatctat agcatcatga cctatacttt cccttggtct atgtttgtaa catttataat
     4021 aatcagtatt atcatgctat tcaaacatag atatttattt tctcatactt ctagtcgctt
     4081 atttattaaa aaattattat ctttttcata taaatttgta ctctacacat cagcacttct
     4141 atttataagt acgattcagt cacccattgt gaaaggtttg tctatgtggt tagctatatt
     4201 atgcctttcc ctgttactaa cctttatttg ttatctcgtt tggacagtat catatagaca
     4261 tagatcatac aacaaagaag tcgatatcat aattgtgtta ggtgctggta tttttaccga
     4321 atttgtcaca ccaatgcttg cagcgcgttt agaccgtgca cttgatatct atcaacaaca
     4381 agcatcagca acaaagatca ttgtatctgg cggacaagga ccagacgaac caattcctga
     4441 agctttagct atgcaacgtt atttgattgc acatggtgtt gataaaacag atatactaat
     4501 ggaatctcac tctataaata catacacaaa ctttttatat tctaaacaaa tcatcaacaa
     4561 tttgtatcat aaagcagtta aaattgtttg cgtaacaagt cagtttcatg tattacgcgc
     4621 cttacgacta gcccaaaaat taggtttatc tatcgatggt gtcggaagtc atacaccata
     4681 tcactttttc ttacatgtgc tcattaaaga ttatctaggc gtaatgtatc agtatagatt
     4741 gttattaacg ttatattgtt caagtagttg gtttatatgt ctttacgccg cttttatgta
     4801 taatagttaa tccacaaata aactattatt ataggttgtt tctaatattg cgtcaaacta
     4861 tctttaaata ttcgttaatc cttgattaga caattgttat attgaaaata aataaactaa
     4921 agcacgtcat cattttatgt aatggtgacg tgcttttttg taaacccaaa tcgtattctg
     4981 ttatctaact tttatactac tatgtcttaa atcattaaca tttagcgtct ttacaagcca
     5041 ctaatcagtt attttgccat cttctaattc aatcactcga tctgcatatt caaataatct
     5101 tcgatcgtgt gtaatcataa taccaatcat ttgttgttct ttaatttgtt gacgtatcat
     5161 ctcggcaact tttgttgctc tatcggcatc taaacttgct gtgggttcat ctgctaaaat
     5221 gattttcgga ttattcataa atgctctcat aatcgcaaca cgttgctttt caccgccaga
     5281 taactgatgc ggatatacat tcaagcgatc ttctaaacca atatttttca aaagttgcat
     5341 tgctcttttt gaactttgtt gtttggtcat tcccgcttct cggcctacga gtgtcaattg
     5401 ctctatcact tttaaataag gaactaaatg tgaagattga aaaataaaac caatatcttc
     5461 caatcgtaaa tcactaggac gatgctgttt atcaaacaat ggtgcatcat tgtaaagcac
     5521 tgtgccactc gtttgactta acaatccgcc taatatcgtt agcaatgttg ttttcccaga
     5581 accagaggca ccatttaaaa tgacaaattc cccttgttcc acttcaaaat taataccttt
     5641 taaaactttt gtttcagaca aaccttctcc gaaatttttg acgatatctt taacaactaa
     5701 tgccattatt ctgcacctcc aattgcttcg ataggatcca ctttaaataa tttgataaat
     5761 gatagtgagg cacctaaaat cgctactaat ataaatatcc ccaccatcaa taaaatattt
     5821 tgcgttgtta agtaaaaagg catcgttaca ggcatcataa atgatagtcc tactatgatg
     5881 atcacagcaa tacctacccc aattattgtt agtgttaaaa tttgtaaaac taacgcactc
     5941 aataaatgtc ttgtcttaat accaattgct ttcaaaatgc caatttgtga tattttttga
     6001 atcgtcataa catagaaaaa tgcacttaga acaattgctg taatagcaaa caaactaaca
     6061 atcatcatat ttaacggggc ttgctctgct tgataactcg caatattacc tgttaaacct
     6121 ttttcactca caacttgaac gtcatttatt ttattaagct catcacgttg ttgttgcgtt
     6181 aaatttttca ctggataaaa tgccgtatta accttattca atgcattaaa tccgttatcg
     6241 ttcaatagca caatggaact atgcgcatac attgtgtcgt ttaaaattcc agaaactcta
     6301 taactagttg aattattttt aaaatgtaat ctatccccga ctctaatgtt gtctgcagct
     6361 aacttatcat taatagcgac ctcatgagca tttttaggat aatcaccttt tttaagttgt
     6421 aagcgttgtt gtttaacgtc attcattgta atcacatctt gttctttatt agataatttc
     6481 aatgtttgaa cattcatttt atatggttct tgatgaatta cctttttaat ttgattctgt
     6541 tgcgtatcac taagttgcga tttctcaatt tgcggctctt tcattttttg aacaacatat
     6601 tcatcattat caaagtgttc aaataacgaa atattctccc taccaagccc ttgagctaaa
     6661 ccactaataa ataacaccat aatacttaat aaaagaatga ttaatgtgat taaaatataa
     6721 cgaaatttgt aaaacataat ctcttttatc gctaatttca tatcgattca cttctcccta
     6781 tttcttcttt agcgtcagta taaggttgaa atatgaactc aatatgaaca attgtttttt
     6841 tacgcaaaaa tattttacat gtataataaa tgaaaaagat aagggagttt atagctatgg
     6901 tgcaatgtct tgttgtcgat gacgatcctc gaatcctaaa ttatatagct agccatttac
     6961 aaacagagca cattgatgca tacacacaac caagtggtga agctgcatta aaacttttag
     7021 aaaaacagcg tgtcgatatt gcagtggtag atattatgat ggatggtatg gacggctttc
     7081 aattatgtaa tacattaaaa aatgattatg atataccagt tattatgtta acagcgcggg
     7141 atgcacttag tgacaaagag cgtgcgttta taagcggtac tgacgattat gtaaccaaac
     7201 cctttgaggt taaggaactt atttttagaa ttcgtgcggt attacgtcga tataatatca
     7261 attcaaattc agaaatgacc attggcaact taacgctaaa ccaatcttat ttggaactcc
     7321 aagtatctaa taaaacgatg acgttgccga acaaggaatt tcaattatta tttatgcttg
     7381 caacacgtcc taagcaaatc tttactcgag aacagataat agaaaaaatt tggggctatg
     7441 attatgaagg agatgaacga acagttgacg ttcatattaa gcgactacgc caaagattaa
     7501 aaaaattaaa tgccacactt acaattgaaa cagtaagagg acaaggctat aaggtggaga
     7561 atcatgttta aaacactcta tgctagaatt gcgatttatt ccattacggt tattttattt
     7621 agtgcattaa taagttttgt attaacaaat gtttactatc attataattt aaaagcatct
     7681 aatgacgcga aaatcatgaa gacgcttaaa gaagcaagac aatatgaaca atcggctaaa
     7741 ccaacgcaca ttcaacaata tttcaaacat ttagggcaaa tgaattacca aataatgacc
     7801 gttgatcaaa aaggtcataa gacattttat ggggagcctt ttagagaaga tactttatca
     7861 caaaatgcta ttaacaacgt gttaaataat aaagattatc atggtattaa agataaacca
     7921 ttcgcattat tcgtaactgg atttttcgac aatgtaacag ataatactgt tggtattaac
     7981 tttaagacaa aagacggttc aatagcagta ttcatgcgtc cagatattgg agaaacattt
     8041 agcgagttta gaacattctt agccgtcttg ttaatgttat tattatttat ctcgatttca
     8101 ttagttatcg catcaaccta ttcaatcatt cgtccagtaa aaaagttaaa gcttgcgacc
     8161 gaacgcttaa ttgatggtga ttttgaaaca cctatcaaac aaacacgcaa agatgaaatt
     8221 ggaacattac agtatcactt taataagatg agagagtcat tgggacaagt tgatcaaatg
     8281 aggcagcatt ttgtacaaaa tgtatctcat gaaatcaaaa caccattaac acatattcat
     8341 catttattaa gcgagttaca acaaacttct gataaaacat tacgacaaca atatataaat
     8401 gatatttata ccattacaac acagctgagc ggattaacaa ctgaattatt gctcttatcc
     8461 gaattagata atcaccaaca tttattattc gatgataaga ttaaagtcga tcaactcatt
     8521 aaagatatca ttcgacatga acaatttgct gctgatgaaa agtcgttaat cattttagct
     8581 gacctagaat caatcaattt cctaggaaat caacgtttgt tacatcaagc attgagtaat
     8641 ttattaataa atgctattaa atatacagat gttggtggtg ccattgacat cgctttgcaa
     8701 catagtcata acaacatcat tttcacaata agtaatgatg gttcaccaat tagtccacaa
     8761 gctgaagcac gtttatttga acgtttttat aaagtgagca aacatgataa tagcaatggt
     8821 ttaggtcttg caattacaaa atccatcatt gaattgcatc atggtacaat ccaattcaca
     8881 caaagtaacg agtatgtaac cacctttact attacactgc caaataattc acattaatct
     8941 ctacctcctg aaaaaacatt tctgttttta tttcaggagg taccttttat attgattagc
     9001 gctttatagc cacttaacat ttaatttcta ccattcaaca cattttaaat atatcgatgg
     9061 ccgtttatgg tttaataatt ttgaaggagg cattaaccta tgatgaaact caatttattt
     9121 atcaatgcaa atgagacgga atcttatatt gatatacatg cacctaaaat gaatgatcac
     9181 gttcaaagta ttattaatgc agtcaatgat ttagacaaat cacatacatt agtcggatac
     9241 atagacaaag aaatccatat cattcatata tcagatgtta taacattcca agttattaat
     9301 aaaaatgtaa cagccattac aagcaatcaa aaattcaaac taaaattacg actttatgaa
     9361 ctagaaaaac aattaccaca acatttcatt cgcatttcca aatcagaaat cgtcaacaag
     9421 tattgcattg aaaaattatt attagagcca aatggactta tacgtatgta tcttaaagat
     9481 gcacactaca cctattcttc tagacgttat ttaaaatcta taaaggagcg cttatcaata
     9541 tgaaaaattt gaaaaactca ttattcatta gcttaatcat tggtttgacc ctttcactgt
     9601 tctttagtat gttatttgca gacggcaaat attatccact gaacccacaa tcaactattg
     9661 gcatattgta ttatacgcat ttcacagaaa ctaccgtaat gttgatttct atcattttat
     9721 ggttactcat aggcgtcgtc tttttccttg gagattttat ctttaaatac acagattggg
     9781 gcattactaa agcaactata gtgcatttca taacaacgta tgtcggattc ttacctttag
     9841 caatacttgc cggttggttt ccactaacaa taaattacct aatcatattt acaattatct
     9901 ttattgtggt ttacacattg atttggatta ttcaattctt tagaaacaag aactacgtag
     9961 acactattaa cgagcaactg aaacaattaa aatgattttt tattaaaatt ataaaagcta
    10021 tacattgcat taaagtagtc tcttctgcaa tgtatagctt tatgtcgtat ttattttaaa
    10081 tacgcatgaa ctgaataata tgttttgact aatctcaatt tgaattgtaa ctgcaactgt
    10141 actttacgac atcaacttat catgataaaa acctaacgaa atgcattttc aaatatttta
    10201 ttcataattt ctgctacttc tttaggactc tctttatatc ctcgtttgac ccaatcttgt
    10261 aacacaccaa tgattgcatt actcataaaa ataagtaaaa aatacttttc cttcgtcgtt
    10321 aacatttttg tatttaatac tggtacaaca ttaatttcga tacgttgttg tagtgatttt
    10381 tttatgactt gatgtaattt ataagcactc tcatcaccta ataacattaa aatgagctga
    10441 ccttcgctta gccaaaaata aaccatcttt tttaaaaata ttgcttgtgt cagagtttca
    10501 cttttaagaa atttcttttt tgcttctttt aacaatgtat taagatagct gtatataaaa
    10561 tcatctttag ttttgtaatg tgtataaaag gttgtccgac ttatttgact cttttcacat
    10621 atatctttaa cagttatatc attatatgcc ttcgttttta atagatttat cattccatca
    10681 tgtatgcgat ttatcgtttt cgttacacga ctatccgtaa aagctgtttg atccatatgc
    10741 cccacctttt ttctgaacat taaaagaaaa tatgttcact atctattaat attttattcg
    10801 caatcttaat atacgcttaa gatgatatat aaataaagtg aaatgtatct caatttagga
    10861 ggggttgtca tggacgcaac tatcgcgaag ttagataaag ttgtaaaaac gtataacaag
    10921 catcacgtat taaacgaaat tagtatgtca atcaataaag gtgaactgct agggttaata
    10981 ggtcctagtg gttctggtaa aacaacaaca ataaagtgtt tactaggtat ggaaaagata
    11041 gattctggat ctgcagaaat tttcgctcat aagatgccta atcgcaaagc tttaaatcga
    11101 ttaggctata tggggcaaac tgatgcatta tacgaaaact taactgctta tgaaaaccta
    11161 gagttttacg gtcgtttgtc aggactgaaa ggaaatttat taaaagataa tattgaaaaa
    11221 catatcgttc tagtgaattt agagcaagcg ttaaataaaa aagttgcaca gttttcagga
    11281 ggcatgaaac gccgattatc tttagcaata acattgttgg ccgaaccgga attaatcata
    11341 ttagatgaac caactgtagg cattgaccct aaattgcgcc aacaaatatg gcaacaattc
    11401 aagcaaatga ccaaaaacgg aaagagtgtc gtcatcacaa cacatgttat ggatgaggcg
    11461 gaacgttgcg ataaagttgg acttattgtc gacggaagaa tatttgctat agatacgcca
    11521 accaatttaa aacaaagatt taatgtagat acaattgaag cggtatttat taaagctgag
    11581 gaggttcgtc aatcatgaaa attttagcta ttgttagacg agtattaaaa gaaatgttac
    11641 gtgataaacg tacacttgcg ctaatgtttc tagcaccaat tttaatattg acgcttatgt
    11701 attttatttt taacggtgat gaaaacgatt tgaaaatcgg tatcgataca tctgtttcat
    11761 caaatataac aaaacaattg ccatcatccg acataaaaac tcaaacgttc cattctcatg
    11821 aaaatatcaa atctaaaatc gagaataatc atcttgatgg ttatatttac caagaaaatc
    11881 aaacattgca tgtcatttat acaaatgaag accctaacaa atctaatatg atcaaacaaa
    11941 tgattggcaa agctatacaa caagataaaa taagcagtat aaagcatcta attgaaaaag
    12001 cacctccgac catgaaagca ccaaacaaac aagatattaa gatttcacat tcctatttat
    12061 acggtaattc tgatagtact tatttcgata aaatgtttcc aatactaatg ggcttctttg
    12121 tatttttatt tgtatttcta atatcaggta tagctttatt acgtgaacgt acaacaggta
    12181 cgttagaacg tgtattatca acttcaattc gtcgaagtga aatcgtcctt ggttatctga
    12241 ttggctatgg tatattcgca atcattcaaa cattaatcat agtcctattt tcaatatatt
    12301 tattgaacat taatttagca ggtagcttat ggtatgtaat tttgattaat atttgtttag
    12361 ctattacagc attatctatg ggaattttca tttcaacgtt tgctaattct gagtttcaaa
    12421 tgattcaatt tattccacta gttgctgtac ctcaggtatt cttttcagga attttcccac
    12481 ttgaaaatat gcctgattgg ctaggtaaca ttggctatat cttccctctc agatatgctg
    12541 gtgatgcttt aaccaatgtt atgattaagg ggcaaggttg gagtaatata tggttcgatt
    12601 tactaattct aatgattttt atcatggcct ttattatctt aaatattgtt ggtttaaaac
    12661 gatacagaca ggtataaatt ctccaaaact tttaaatgac ttcaatcaag ataagctttt
    12721 aaatataaag cactgataat aaaaacaacc actaaaaaaa cggtaatgtc tatcacatta
    12781 aaaagacatt accgttttgt ttattattta acttgtaaat acttagttac ttcttcatta
    12841 attttgtgat ataaatcctc atgatctgtt aaacgataac caaatgacgg caccatttct
    12901 ttaatcttgg gttcccatcc tttgaattca tcacgatagc atcgctgtaa aacatcaaac
    12961 ataatatcta cagctgttga cgcaccaggt gatgcaccaa gtaatgcagc taatgtgcca
    13021 tcatctgacg taatgacttc ggtaccaaat tgtaagttac ctttagattc ctcagtatcc
    13081 ttgattactt ggacacgttg ccctgctgta atcacttccc aatcttcatt tttagcattt
    13141 gggaaaaaga ctcttaaatc atccatacgc tcatcattag ataacatcaa ttgtgacact
    13201 aaatacttcg taagactcat ttctttgata cctgcagata acatcgtcac gatattattt
    13261 ggcttaaccg atttaattaa atccatatgt gaaccagttt ttaaaaattt aggtgagaaa
    13321 cctgcaaatg gaccaaataa caatgaacgc ttgccgtcta caaagcgtgt atctaagtgc
    13381 ggcactgaca ttggtggcgc acccactgct gcttttccgt atactttagc atgatgacga
    13441 tcaatcactt cttgatttgt acagcgcagg aataatccac ttactgggaa accaccaata
    13501 tgttttgatt gtttaattcc agtcttttgg agtaatggta aactcgcacc gccagcacca
    13561 ataaatacaa aatcagattc atatgttgtc gtttcgtttg tttctaaatc tttaacttta
    13621 actagccatg ccccagattt ctgtttcttg atgtctaata cattctgctt atattgaatt
    13681 cccacaccac gttgttctaa attatcaaat aactttgcag ttaacgcacc aaaattaaca
    13741 tctgtaccag tttcatcata agttaaagca attggttcat cagacttacg accttcaatc
    13801 attaacggta cccaagattt catttcttct tcatcttgcg ataatttcat tttttcgaat
    13861 aaaacacttt tctttaacgt tgcaacacga ctttttataa aagctacatt atcttcgcca
    13921 atgacgaaac tcatgtgtgg caccgcttga ataaagcgat ctgggttatc taattgtcct
    13981 gttttaacta aatatgccca aaactgcttt gaaatttggt actgctcatt tatcttaatt
    14041 gctttactac aatcaactgt gccatcctta ccttcttttg tatagttcaa ctcgcaaagt
    14101 gctgaatgcc ctgtaccggc attattccat acatttgaac tctcttcgcc aggttgtgat
    14161 aatttttcaa acactttaat atttttctca ggtgataatt ctttaagtaa tgttcctaat
    14221 gttgcactca taataccgcc accaattaag atgacatctg ttttgctatg ttgtgttgtc
    14281 ataacaaata cagtccccct ttttaaaatg aataatggaa cgttcgagaa atacgacata
    14341 ttaataccac tttgaatcaa taagtgtctc aataggttcc catggtgatg ctctattact
    14401 atctactatg tatattaata ttctataata acgaaactac tttaattata tactttatgt
    14461 gcgatagcac aaagacaaaa ccacaaacct taacagctat caaccaattt aatttgattg
    14521 ctgattactc actcttcatt ttaacataaa gcgctaccat tattataatg tcaaacttct
    14581 ttcattaatg atccattaaa aaaaagatga gatgttagaa aacatctcac cctctgtata
    14641 tttatatttt gaaatacgtt tatttatagt aatgacaaga tgaaagtcca aatacagatg
    14701 aatattagta aacatacact gtatttcaat gtcattttta ataattctga ttccttacca
    14761 acttgtttta ctgctgcagt tgcaattgca attgattgtg gtgaaattag ttttgccgct
    14821 acaccaccaa ctgtattagc agatacaaga agtgaaccac ttgttccaat ttgttgtgca
    14881 acagaagctt gaattggtgc aaataatgag ttgttattta caactgatcc tgtcataaac
    14941 acacctatcc aacctaagat tggtgataga actgggaaga cattacctgc tttagcaata
    15001 ccttgaccca ttgctgcact taaaccacca taagttgtga ttttagaaat tgctaagatg
    15061 aaacaaattg taagaactgg taaccataat tctttaaatg taacaccgaa taatctacct
    15121 gcatctttaa agttaacctt tttagacatt aaaattgtaa taataatagt taataaaata
    15181 gctgtacctg tttgtccaat aatatttaaa gtcaatacta atggtttatg cgtaacttcg
    15241 ctgactgttc caggtaagtt gaatttaaat actaatgatg ataaagcacc atttggtaag
    15301 aataagtttt taaagaatgg cgcactccaa atcattacaa tgactgttaa tacaatgaac
    15361 ggactccatg catgtaatac tgcttttgca gaatgtgctt ttgcaggttc aatttcttca
    15421 tctttattaa cacgataaat gtgttttggt tggaattttt tagaaaatac tgctaatgct
    15481 aacattgtta ataacggtgg aataatatct gctaattcag gtccactgaa tacagttaat
    15541 aatccttgag taagtgtata agtgattgaa actactaaaa ttgctggtaa tgtttcttta
    15601 acacctctaa aaccatcaat aataaagata agtaagaatg gaataatgaa atttatgatt
    15661 gccaatgtta aagttgctga ttgagaaaca cctaatactg aaacatctcc aggtaatttc
    15721 aacgtttcta caacacctac agggatacca atcgcaccaa aagcaccaga cgctgcattt
    15781 gcgactaaac ataacatcgc agcttttaat ggattaaatc ctaattgtgt taataaaagt
    15841 gcacaaattg caattggtac accaaatcct gctgcacctt ctaaaaatgc gttgaatgca
    15901 aatccaataa gtaaaacttg aatacgttgg tcttgtgaaa tatttgtaat actatcttga
    15961 attgttaaaa attgtccaga ttcaacagta attttgtata acaatactgc catcataacg
    16021 atatagccaa tcggaatgat accttggaag aaaccttcga ctactgcacc agaagcgata
    16081 ccaactggca atttgaaaaa tggtattgca atcagtaatg ttacaacaag tgttgtaatg
    16141 gctgcataaa tacctttcat tttaaaaaca gttaaacaaa gtaaaaacag tacaatcggt
    16201 attgctgcaa ttaaagacga taataataaa ttatcaaatg ggttaaacgt atttactaac
    16261 ataggctgac tcttctttcc ataaagtagt agtgtaattg cttcattaaa atcatgctct
    16321 ggctatagca ttttgttatc gataacattt tacagaacag tgagattaat gtgatttttt
    16381 tcacaattaa aatataccat tttttcagac tattaacaat atcactttcc tatttaattg
    16441 ttttattttt cattttaaat ctgttcatca aaatgaattg tacttaatgt aatgaagtaa
    16501 cttatactat tcatgaattt tacataagac cgtgctaaaa taaggaagat actacgatga
    16561 gaaatggaag ttatagcaat gattaaacag ataaatgttt ctaatatgca aaagtttgaa
    16621 tctcaattaa tgaaagctca ttctgaaggt tatacacatg tcgttccata tgccaatgag
    16681 ataatgattt atcaatctat gttagatgcg gttcaattat atcctaagtc tatcgtggtt
    16741 gattatactg tggatggaca atacaaaaat gattgtcact atttcggtca atcatcgatt
    16801 aacattgccg attgggctca aaacaataat tattatccta acctgatata tgcgattcaa
    16861 cagactcttg atttaataca ttattaccct gtagaaacga ttttcgattt agctttattg
    16921 acacttctga aaggtgattt atcaaacgat ggtcatgtcg tcttcgattt caaggcacct
    16981 ttagcaacaa gtgcttcaat atgggaaact attaaaacta ttgaagattt tgatatgatg
    17041 tctcagtttt atttgaataa aatggcttat attgatcatc atcctatacc ttttcgtaac
    17101 ctttttatcg aggattcaga acaacttaat tcaccagata attggttgta ttctaccaag
    17161 tttatgctac ctaaatggtt atataaaata gcaaagcaac gtgctgataa caaacaatta
    17221 caaaacctcg gcttgtatac gaagcaacca aacgttttaa aagatcacat cgtttttatc
    17281 ggtgatcatc atcaatatat aggtaattca aaatatttat ttacttactt cgttaaacat
    17341 aatccaatga ctgcctgtta ttttgttact gacgatcgtc gcggaccaca tttcatatca
    17401 cctaagtctg aaaaagctga cgaattgatt aacagcgcac gcgtagtttt agttgaaaat
    17461 gatatacctg aaacgttaca accaaacggt actttaattc aattacatca aggcacacca
    17521 ataatgcaat tatttttaga tagtaaagaa cctattaaaa atatagaaac accattttat
    17581 cgtgctaaaa ggtataatcg ctggttgcaa ttcgattatg ttatacattc tgctgatgat
    17641 attagccact tttatcaaac ggcttttcct agtcaccaag caaatgtatt ggcttatggt
    17701 aatcctaaac accaatattt actacaaaag cgtaacgaaa gtactactca acaacagtat
    17761 aagaaatcgt ttaaaataaa tgatcaaaaa ccagttttat tatacgcacc tattggatta
    17821 gtgagtgcgc aacaattacc actatcagat gctttattca aagcctatca tgttgtggtt
    17881 cagggtgttg atgaaacgat gttaccagaa gaggcgcttg ttgcaccaaa gtatcttagt
    17941 gctcaagact taattctaat gtctgatgtc gttatcactg attactcaaa tataatattt
    18001 gatgcgatgg ctatagacaa aacagtagca ttatacactc caaatcacag tcaatatatt
    18061 gagtctcaag gtgttaacga agatatttgg cgtcatctat caaaaatttg gtatacagac
    18121 cgacaattat taattaataa tttaatttcc caggcaatac cagtgattaa atatccacaa
    18181 atacaacata aagaacaacc attagaatct atttcacaac ttatattgtc taagatgaca
    18241 tctaatcaat agtgtttaaa ttcctcagtg gctgtgaatg aggtttaaaa gtactataga
    18301 acgtaaactt ttatacttta aaatacgcaa aaaaacggta aaccctaatt catattatag
    18361 agtttaccgt tttatttttt taacttacat catagttata ttaacattat tgttggtagt
    18421 ttggatcagt aaccattgct tgtccagtat aatcaaccgt tacaattgaa tattttccat
    18481 ttgcatttgg gtctttaaaa ctaaacacat acttatagtt gccattatgt tcttcaatag
    18541 aataatcatt atacacttta ttattactac caaatttatt tgcttcatta ttagccgcat
    18601 ttaaagctgt ttggaaattt ggcaattgct gtaaagcttg agttttattt ccattaaacg
    18661 gataaatttg acgtgcaacc ggcgcggcat tttgtccata atatggtgca acgtaacttg
    18721 atttttgatt attattcgct tgattattac ttgattggtt attatttgtt tggttttggt
    18781 cattgtttgt tgcatttgaa ttagattgtt gctggttatc gtttgcacta ttatctttat
    18841 tatctttgtt tacgtcttta ctatcatctt tattgtcttt cttatcttta gatgaatcat
    18901 ttgttttttt atcttgttgt tcagttttcg ctttatcatc tttttcttta ttactgtctt
    18961 tttgttggtc actatcttga ccacatgcag ctaaaaataa tgataatgct agtaaccctg
    19021 taactaatct tttcatacat atctcctcct ataattcgat attcattgaa taagcttgaa
    19081 atacatatct accatgtgta tcatttcatg gcttgttacc aaagacgtca acattaatat
    19141 gatttgaatt atcacaatac ccataactac aatctaaggt tctttttatt ataccctaat
    19201 ttttgttcat tattatttaa tttttgtgaa ttttatgttt tctataaatt taattatttt
    19261 actttaacaa ttcattacgc atttagcatt tcaaggtata cacaatattt attactatga
    19321 tttcatttta tctgctgcaa aaacaatcat tatacctctt tttccataat taaatctgta
    19381 tccgttacat cacctgtttg aaaatgatgt tcaccaacca ctttaaatcc atgacgttta
    19441 taaaatgctt gagcacgagg attatgctcc caaactccta gccaaatttt atgtttatta
    19501 tgttcttgtg caattttttc ggccaattct atcaattgtg aacctcttcc gccaccttga
    19561 aagtctttca aaaagtatat gcgctgcact tctaaatagg tctcccccat ttcttcagtt
    19621 tgagcactat taatattcat ctttatataa ccaacattcg caccatcttc ttgataaaaa
    19681 taatgaaatg aatctacatg gttaatctct tgtgtaaatt tttctacagt ataattgtct
    19741 ttaaaaaatt gttcaaaatc tttgtcatca tagtaagaac caaacgtgtc ataaaatgtg
    19801 ctagttgcta attcaactaa ttcactagca tcttgttttg aaatctcttt gattatccca
    19861 gccatataaa tcctccaata aacagtgatc gaatcaaaat attacttaat ttttcagcca
    19921 aaactattta aaaatacatt aacacaaatc aattacaaat tgtattgatt gtgtgtaaca
    19981 tcaataaatg atacatttat tccagtaaaa tggccatact ttcaaaagag aaaaagagag
    20041 gatgtatcgt tgtgatagaa acatttaaag cgtttgtaat tgataaagat gagagcggta
    20101 aagtgacacc aactttcaaa caattatcgc ctactgattt acctaaagga gatgtgctga
    20161 ttaaagtaca ttactctggt ataaattata aagatgcttt agcgactcaa gatcataatg
    20221 cagtcgtaaa atcgtatcct atgattccag gaatagattt agctggaaca attgttgaat
    20281 ccgaagcacc aggttttgaa aaaggagaac aagtaattgt aacgagttat gacctaggtg
    20341 ttagccatta tggcggtttt agtgaatatg cgcgtgtaaa atcagaatgg attatcaagc
    20401 ttcctgatac tttaacatta gaagaatcaa tgatatatgg cacagctggt tatactgccg
    20461 gtttagcaat tgaaagactt gaaaaagttg gaatgaatat tgaagatggt cctgtactcg
    20521 ttcgcggtgc ttcaggtggt gtcggtactt tagcagtact catgcttaat gaacttggtt
    20581 ataaagttat cgcaagtaca ggtaaacaag atgttagcga tcaattactt gaacttggtg
    20641 ccaaagaagt tatcgatcga cttcctgttg aagatgatca taaaaagcca ctcgcatcat
    20701 caacttggca agcttgtgta gaccctgttg gtggcgaagg tattaattat gttacaaagc
    20761 gtttaaatca tagtggatca attgcagtta ttggtatgac tgctggtaat acttatacta
    20821 attctgtatt ccctcacatt ttaagaggtg taaacatttt aggaattgac tcagtattta
    20881 ctgctatgaa attaagacag cgcgtttggc gtcgtctcgc aaaagattta aagcctgaaa
    20941 atttacatga gatcaagcaa gttattacat ttgatgaact tccagaacaa cttaacaaag
    21001 taattaaaca tgaaaataaa ggccgcattg ttatcgattt cggtgtagat aaatagtatt
    21061 catgaaaaag acatcccgtt atgcgagatg tcttttttaa tttagtattt gatatacata
    21121 ccgcctgaat ctggttcggt aggcataaat ccaaattttg catataattt atccgctggg
    21181 tagtctgcga tcagactaac gtatgcactt tcgacagata catttttaat atacttcata
    21241 atatgttcca taatttgact gccgtaccct tgaccttggt aacttttcaa aactgcaata
    21301 tcaacaattt gaaaaacagt tcctccatcg ccaatcactc tacccatacc aattaaccga
    21361 tctttatcat acaaggttac tgtaaataag gcattaggta atcctttttc agctgcttcg
    21421 cgcgtctttg gactcatacc tgcattaatc cttaatgcgc aataatcctc gcaagtcgga
    21481 atatcatatg tcactttaac cattatttac cccacttttc atcacacaat atataaacct
    21541 agtataaatg tttatttaca atagtcttat tcgcttcttt aaacacttca tgatgacttg
    21601 aaacataacc ttctgcattc gcatctggtt ggatatatgt tttagcaagg ttcgctgcat
    21661 ttgcaccatc actaaatgca cttgcaatta gatgtgattt tgcatcatga taaacaatat
    21721 ctccacacgc atagatacca ggtatacttg ttgtcgtatt accaaatcct ttaacacgac
    21781 aatcatcatg catatctagc tttgaagatg tttcactcaa taatgtatta caacgatcaa
    21841 aaccatggct aataatgaca tcgtcaaatt taactgtatg cgtatcacca ctttcaacat
    21901 gttccaaaac aacttcactt atatgcgttt catcatcatt gccgaccaag tatttaatac
    21961 gtgttttcgg gcatagtttc acatttaaat ctgtcaccag cgttttcatc gcttcatgac
    22021 cacttacatc ttcttttcga taaacaactg tcacgctttt agcaatcttg gcaatatcat
    22081 gcgcccaatc taatgctgta tttcctccac ctgatattaa tacatcttta tctttgaaac
    22141 gtctgtaact ttgtacaaca taatgtaaat tagttaattg atatctctct acacctttaa
    22201 catctaattg ttttggatta ataatacccg caccaattgc aatgataact gctttcgatg
    22261 tatatatttt tcccgcttct gtttcaactt cgaaatgacg ttctgccttt ttcctaatat
    22321 ctaccacacg ttcattcaaa tgaacttccg gtttaaaata taatccttgc ttaattgtat
    22381 cttttaaaat ttcatgacaa ggttttggcg caatgccgcc aatatcccaa ataatttttt
    22441 cagggtaaat tctcatctta ccccctaatt cagattgaac atctatcaat cttacagaca
    22501 tatctcgcaa tccagcataa aagcttgcat acaaaccaga cggaccgcca ccaatgattg
    22561 taacgtcttt cattatgtgc ctcctatgac tctctatatt catttctttc attaacgcgc
    22621 tcaaattgat aattattatc atttaaagac attatactat taatatttat attgttaaaa
    22681 taaatcgcat agttagccat gaattatcaa taactatccc atcacaatat aaaaacacac
    22741 ctttcaaagt acgaaacaac aatgttcctt tgaaagatgt gtatattttt tagttctagt
    22801 tatattattt tttaaaagac tcatcacgtg gttctttaag aattgcttgt cttaaaagga
    22861 aaaatagcaa caataaacct gcaagcatac ctgtgtgccc aatacctgca aagcctgcaa
    22921 atgcttctgg agagtatgat ttaccagtga cttggaagaa tccttttgtc accatcatac
    22981 ctatagtaac gataacacct atgttatata catagaagaa ccagttaaat aagtagtaac
    23041 ttgataattt aaataacttc tccaatggta ataaaattaa aaacataaac atacctaaaa
    23101 taagtgtatg tgtgtgtaca agtgataatt gtgttgtacc agtaaaatca tatgcttttg
    23161 ttagctctct atagaaaaag ccactaaata aacctatgat catataaaaa agaaatgaat
    23221 ataataacct acgcattttg aatcctccct caccttttca ttatatccga ttataccgat
    23281 tataacagtg acaaaaaagc gaagatatga cacaactgaa tttggtttag cacatagtat
    23341 gacagctaaa ataactttac atcaagcgct atacaaataa aatagctata ccatgacgct
    23401 cgctacaaac gtcttgtata gctatatttc tatttattaa attatgacgg cacttcagta
    23461 cgttttgtgc tatgttttct aacaatagct gaaactaaac ttgatacagc cccaaaaatc
    23521 ataaacccta taaacatcca cattgtacta tttaattcaa tatgatgatt caagtacaat
    23581 agttctctta cacttgttgc atagtgtgtg aatggattcc aatcatatac atatttttga
    23641 taactttcag gcaacatttg tttaggtaac gttacaagtt gcatactaaa gaacattaaa
    23701 atgaagaaaa ttggaattga cttcatacct agccatacca taacacctaa aataaggccc
    23761 acgaaaccaa gaatcgcaag tgctacaaaa attgcgatac gatttggatg gtcaaaatca
    23821 aatccttgaa cgccttgcat gaaataaata taaacaaagc tacctgcaaa tgctgcaaca
    23881 actgcaaata tcatttgtcc aattgaagca atgatacgat gttgcacgac gatattgtta
    23941 ctagttctaa atgcaaagaa caataagata gacgttacga ttgaacctat ccaaattggc
    24001 ataaacatta ggaatggtgc attaccacct gcttggtgat ctttaacttt attaagtttt
    24061 tcattatcca cttttactgg attcgtcaaa ccattgatgt ctgcggcatt gactttaaca
    24121 ttttgactcg ttaatgtttc caaactttgc ttcgtaattt gagcattaat attatcaccc
    24181 ataccagtta acacagccga tgcaatttgt gaaccttgta agcttgatcc ttcacttaca
    24241 atcgttttaa atttagcctg cttaacctct acttgttgat tccccatttt ttgtttcatt
    24301 tgttgaacta cttgtggtgg aatttcacct gaagcaactt tttgttgcat ttcttctttt
    24361 ttactatcca taactacttt ttgtgtttta ctcatagcat cttttgaaaa gtctttatca
    24421 ataatagcta ctccaaagat tttttgatct ttcaaatctt tttcaaggtc tttttcacta
    24481 tcaaccttaa cccatttaat tttattagaa tcactatcta ataatttatc ctctaatttt
    24541 ttaccaatgt taacattttt atcttgaatc gttgtacctt tatcctcatt taatatacca
    24601 attggtaaat cttttggttt aggattatat gcaggataaa aagctaaaga aaagattacc
    24661 aagataatca tagttgctat tggtgcaatc cataataatt tatttttaaa tatattcat
//
LOCUS       DALMNS010000031        24382 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.031, whole genome shotgun sequence.
ACCESSION   DALMNS010000031 DALMNS010000000
VERSION     DALMNS010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 24382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24382
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.031"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            199..2028
                     /locus_tag="O6Y56_001065"
     CDS             199..2028
                     /locus_tag="O6Y56_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HDB5574340.1"
                     /translation="MFNQFKRLIIGQPKKNRELKDEKISKFKGLAILSSDALSSVAYG
                     PEQILITLSVVGAVATWYTLPIAGAVLILLAALIMSYRQIIYAYPKGGGAYMVSKTNL
                     GEKWGLLAGGSLLVDYILTVAVSISSGADAFVAAFPSLYGHKVLIACLLVLFILILNL
                     RGLTESATVLSYPVYLFIIGLVILIFIGTFRVATGDIQPHMHASVGTAVPGVTLFLLL
                     KAFSSGASSLTGVEAISNAVTNFREPSANNAVKTLIAMGSILAFLLVGIVGLAYVYGI
                     MPQTETTVLSQLAMQIFGDNAAFYFVQATTVMILVLAANTGFTAFPMLAASMSKDKYM
                     PRMFTVRGDRLGYSNSIIILGVLAIILIIVFDGMTEDLIPLYAVGVFIPFTLAQFGMV
                     IKWIHERPKNWLSKLSVNLLGGIVTFIVFMILLITKFSQVWPILIFLPFVVIFFLKIN
                     KHYRDIAEQLRSDIDVLNVDVVDRNLAIVPITSITTAVDKSIYYAQMLANNDVIAVHV
                     SFGDEDEKAFQEKWKRHFPDVRLVILHSEYRSIIRPISRFIDKINRKANDQNYMITVV
                     IPEFITKKRWHNLLHNQTSLRMKLYLIYQKNVNVCTIPFKLKK"
     gene            complement(2166..4244)
                     /locus_tag="O6Y56_001066"
     CDS             complement(2166..4244)
                     /locus_tag="O6Y56_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HDB5574341.1"
                     /translation="MALLEAFLIFIFAVIISSVINNRFPQIPTAFIQIALGVVIFIIP
                     IQVDFQFNSEVFMFAVIAPLLFVEGTHVSRTKLLEYRKPILLMSMALVFATVVGVGYF
                     IHWIWPALPMPAAFAIAAILCPTDAVAVSAITRGKLLPKGSMTILEGESLLNDAAGII
                     SFKIAVTALVTGTFSLFQAVEQFIISTILGVLIGAIIGFVVVRIRIDLTANKGLKDNN
                     TLTFIQLLTPFVVYFLAEEVHASGIIAVVIAGLIHGLERDRLIRAQTELQMNYHQIWN
                     TFSYALNGFVFVVLGFMIPTVVIDIFQTEPDNFSFLIVITILIAIAIYACRFVWVYFW
                     YKDFYFPKNIQSYLDEEHDSHETPPSRVRYAFIMTMCGIHGTISLSMALTLPFIITKG
                     QAFEYRNDLLFIASFMVLISLILAQIVLPLITPSAEDTTFKGMTYQSAKIFIVQKVIQ
                     HFKNESKKDKNDTNYRPVLNQYYGELLFLLNSEPDNQNTKELKRLEDIAKVIETSTLE
                     RLIDKGKATYQDINNYRNIVELTETHRTASFVEKFANFFKMLWLRLKAMKHYKALNKE
                     SKKQEFENSFKDVQKIMRIVNHNIILRLKEEQNSTNVLEVSLVINHYYDMSRSLKWRA
                     QRRKERQENSNQIIPQAMFHNHKLEALYLQRHLLDELIRKNKINNIVAAQIRENINYN
                     EIVLSLQSKH"
     gene            complement(4382..5791)
                     /locus_tag="O6Y56_001067"
     CDS             complement(4382..5791)
                     /locus_tag="O6Y56_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDB5574342.1"
                     /translation="MARKLHRELNNRHIQLIAIGGAIGTGLFLGSGQTISLTGPSLLF
                     TYMIIGVVLFAFMRALGELLLSNTRFNSFVDIANEYLGPFGGFVIGWTYWLCWIVSSM
                     SDLTAMGQYFAFWYPQVPNWITVLFIVLILISFNLLGARLFGELEFWFSIIKVVTIIA
                     MVIVGLVLIFFSFKTHYGHASFTNLISHGGMFPGGTFGFLMSFQIAVYSFIGIELIGV
                     TAGETKDPEKTLPKAINNVPIRILLFYIGGLLVIMSVIPWNDIDPNSSPFVKLFTLIG
                     VPFAAGVVNFVVLTAAASATNSGIYSNSRILFGLSQQGLGPKVLNKTNSHGVPYLSML
                     VSSIALLIAALLNYIFPNAIQLFIYVTTLSTVLFLVVWAMIIVAYLMYLKKHPEAHKN
                     SKFKLIGGKPIAYIILAFFFFVFVLLFFSDETRAAIYISPFWFIFLFFFYKKYKTNAE
                     KLAYEQRQNDSGHFRYDNQ"
     gene            6077..6883
                     /locus_tag="O6Y56_001068"
     CDS             6077..6883
                     /locus_tag="O6Y56_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDB5574343.1"
                     /translation="MKIGTIADLHIDRHNKKTSKDYLEALVETVKYKNLDILLIAGDI
                     SNHYQLTHQFITQLTKQLDIPVKFVPGNHDLWEVESMTTQDIWNNYKSMSQCLVGKPF
                     IVNEEWAIIGHTGWYDYSFAAQRFSLDELQRGKHYGATWQDKERISWGISDQNLSKIA
                     AEQVKKDILEVGNRRVILVTHVVTHPDFIVPMPHRIFDFYNAFIGTSDFNPLYAMFDI
                     PYSIMGHVHFRKSVMDDGRCYLCPCLGYPRQWRSEDIYQEINETIQIIEI"
     gene            complement(6946..7602)
                     /locus_tag="O6Y56_001069"
     CDS             complement(6946..7602)
                     /locus_tag="O6Y56_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001080277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HDB5574344.1"
                     /translation="MNRKILPVKPISQLFPIPMVMGCEGVSAAMMLQYNNQHIPATEI
                     MRHWPTHPNNPHKGYVGHHLFIKLGNYHQTIFPEAYVPFLQKYNPNIVDGTGKSLEDL
                     KGIIDQGQPVLIYHTNLGSKPLLRVFRFDNKPAKQVSNIHVTLLIGYDDYYYYYIDPL
                     WSHIRRGLVLPAIIPNRKQIIKIRKEKMEYSFNSPGRKCIYVQPHSYTIENQQQNKHT
                     "
     gene            7715..8188
                     /locus_tag="O6Y56_001070"
     CDS             7715..8188
                     /locus_tag="O6Y56_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDB5574345.1"
                     /translation="MEYQLQQLASLMLVGIKETYENGRQAQQHIAGFWQRCYQEGVLA
                     DLQLKNNGDLAGILGLCIPELDGKMSYMIAVAGDNSDDIEKYDVITLASSKYMVFEAQ
                     GAVPKAVQQKMEEVHHYIHQYQADKVKSAPFFELYQDGDTTSEKYITEIWMPVKG"
     gene            complement(8311..9522)
                     /locus_tag="O6Y56_001071"
     CDS             complement(8311..9522)
                     /locus_tag="O6Y56_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HDB5574346.1"
                     /translation="MQSSKTKTKHFSFLLLITLGVMTAFGPLTIDMYVPSLPKVQGDF
                     GSTTSEIQLTLSFTMIGLALGQFIFGPLSDAFGRKRIAVSILIIFILVSGLSMFVDQL
                     PLFLTLRFIQGLTGGGVIVIAKASAGDKFSGNALAKFLASLMVVNGIITILAPLAGGL
                     ALSVATWRSIFTILTIVALIILIGVASQLPKTSKDELKQVNFSSVIKDFGSLLKKPAF
                     IIPMLLQGLTYVMLFSYSSASPFITQKLYNMTPQQFSIMFAVNGVGLIIVSQVVALLV
                     EKLHRHILLIILTIIQVVGVALIILTLTFHLPLWVLLIAFFLNVCPVTSIGPLGFTMA
                     MEERTGGSGNASSLLGLFQFILGGAVAPLVGLKGEFNTSPYMIIIFITAILLVCLQII
                     YFKMIKKQHVA"
     gene            complement(9705..10364)
                     /locus_tag="O6Y56_001072"
     CDS             complement(9705..10364)
                     /locus_tag="O6Y56_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574347.1"
                     /translation="MKRTDKYRDSYQYDNQNQNHRRQSEDASYRQQYAKGDPEEHPER
                     YYNGRDYRREQILEEENEKSRRSKKWLYIIIAILLIIVAIFVTRALLNNDSDKVSNDP
                     KVSQNYKKQVENQDGQINQQVDNAKENIKNNQKTDDIIKNLQNQIDNLKQQEQNKADS
                     KLTQFYQDQINKLTEANNALKNNASQGKIESMLNDINTKFDSIKSKLESLFKDDNGGA
                     N"
     gene            complement(10424..11566)
                     /locus_tag="O6Y56_001073"
     CDS             complement(10424..11566)
                     /locus_tag="O6Y56_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HDB5574348.1"
                     /translation="MQLQKIVIAPDSFKESMTAQQVGNIIKQAFTNVYGNTLHYDIIP
                     MADGGEGTTDALMHATGATKYTVIVNDPLMRPIEACYARADEQQIAIIEMAAASGLDL
                     LEKEERNPLYTSSYGTGELIKDALNHGAKTIILGIGGSATNDGGTGMLSALGVKFTDV
                     NGDLLQMNGANLAHIAQIDITNLDSRLKEVTFKVACDVSNPLLGENGATYIYGPQKGA
                     DAKMIPKLDFAMSHYHDKIKMCTGKSVNQIPGSGAAGGMGAALLAFCETTLTKGIDVV
                     FDITDFHQRIKDADLVITGEGRMDYQTIFGKTPVGVALAAKQYHIPVIAICGSLGENY
                     QHVYDFGIDSAYSIISSPSTLEDVLQNSEQNLLNTATDIARILKLQ"
     gene            11834..12220
                     /gene="gtxA"
                     /locus_tag="O6Y56_001074"
     CDS             11834..12220
                     /gene="gtxA"
                     /locus_tag="O6Y56_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase GtxA"
                     /protein_id="HDB5574349.1"
                     /translation="MKLTQTHAEILKFIIVGGINTLNYYVVYLLLLKLLHIEYMISHI
                     TGFIVAFVISYYLNCYFVYRVKPTWRKFISFPITQIVNVSLQTVLLYVFVSWLNLPAE
                     IAPFADLIITIPITFILSKWILKDSN"
     gene            12353..12460
                     /locus_tag="O6Y56_001075"
     CDS             12353..12460
                     /locus_tag="O6Y56_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Fst family toxin"
                     /protein_id="HDB5574350.1"
                     /translation="MFNLLIDIMTSALSGCLVAFFAHWLRTRNNKKGDK"
     gene            12487..12654
                     /locus_tag="O6Y56_001076"
     CDS             12487..12654
                     /locus_tag="O6Y56_001076"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574351.1"
                     /translation="MAVVRGFGVFRCSIYYVTNYSIDEQGVQCIFTILQLMDLIIFEL
                     SILKNDLIVES"
     gene            13108..14871
                     /locus_tag="O6Y56_001077"
     CDS             13108..14871
                     /locus_tag="O6Y56_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574352.1"
                     /translation="MNNQTNWIKILSGFASDSKWKIMLSILLSIISVFSGLVPYWAVF
                     KIILMMINNAYTINSIMVYIFIALIAYISQVCCFGASTMLSHITAYEILSEIRKKLAQ
                     KLMRLPLGVVESKKIGELKNIFVDKVETIELPLAHMIPEVIGNLLLSAAIFLYIMLID
                     WRMASALLVTIPISIFAFKKVMSGFNETYAEQMKSNNYMNSAIVEYIEGIEVIKTFNQ
                     SQSSYKKYQDAVDNYKIHTLNWFKNTWGYMNLGASVLPSTFLGILPVGMYLISINQLN
                     YAEFFICIVLSLGVVAPIKNFTNYVNHLKSIQYALTEVNQILILEELALSSRFMEPQS
                     YEIAFNNVGFSYTNDKDERVFKNLSFTVPENHFTAIVGESGSGKSTIAKLISRYWDVT
                     TGEITIGNVNIKNIEQKQLNELVGYVGQDNFLLNLTFKENIKLGNPEATDEAVEKAAK
                     LAQCHEFIEKLPDGYDTNVGTVGDKLSGGEKQRVTIARMILKDAPIIVLDEATAYVDP
                     DSEQKIQEALNVLTRNKTLIVIAHRLSTIQHADQIIVLGNQQILEKGSHQLLLKLEAH
                     YKNMWDMHMHTKDWGINTESN"
     gene            14896..16629
                     /locus_tag="O6Y56_001078"
     CDS             14896..16629
                     /locus_tag="O6Y56_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574353.1"
                     /translation="MFRITFKILNWVSPYKTRMVLGFIMSFLNAIFIALPIFLASQIF
                     NNVVSNKSIYGKDIFNVVIIMIILVLGRFITAYLKSKNQESIAYEMSANERLNIGNKL
                     KNVPLGYFNTHHSNELTTIVTTDLTFLENFAMKMVDIVINGYILISVLILSLLVVSWQ
                     VALLACIGVLLSFLAIQLLENKSKKNAPTYHYAQNQLIEKVVEVIRGIQVIKSFAKEN
                     TSLKSFNQAVNESKRINTKIEMQYIPFNLLHLLSLKVVSIMIVLVACLLYMNHSIDLP
                     TLIMISIFSFVIFDSVENINSAAHVLEMIDMTIDDIEKIKNAPELDENGKNLTIKNEN
                     IAFQNVNFSYDDKQVIKNVNFEIPTQTSTAIIGPSGSGKSTLCHLLLRFYDIDDGNIR
                     IDGVDIKDMTLSTLMSKISAVFQKVYLFNDTIENNILFGNPGATKEEIIRAAKQACCH
                     DFIMSLPEGYQTMLNEKGSNLSGGEKQRISIARAILKDAPIIILDEATASIDPENEQL
                     IQTAINELSKGKTVITIAHKLETIKNADQIIVLNEGEIIQKGSHDELIRKPGMYQDFI
                     RIKSKSAGWKL"
     gene            16860..17027
                     /locus_tag="O6Y56_001079"
     CDS             16860..17027
                     /locus_tag="O6Y56_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574354.1"
                     /translation="MQLLILTDIFYRIAVYICPNSVRSLSHFNSKVKILTKFIVILRS
                     LNSCFLEKHAP"
     gene            17082..17768
                     /gene="bioD"
                     /locus_tag="O6Y56_001080"
     CDS             17082..17768
                     /gene="bioD"
                     /locus_tag="O6Y56_001080"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDB5574355.1"
                     /translation="MRIFITSTNTDVGKTYVTKHLYHALKRRGHRVCVFKPFQTEERQ
                     DGTFPDLEVFKNECDLSYDITSLYTFKQPVSPHLAFKMADQIFLNKQRVLDKVKVLDK
                     EFDFILIEGAGGIAVPIYEGTDDFYMTKDLINDCADCVISVLPSKLGAISDAIVHQDY
                     VNQNVSASNFLIMNRYTDSYIEKDNQITIGKLTNKTVYTFEEHATYENFSEAFLKQLI
                     GVKNELHTTT"
     gene            17746..19104
                     /gene="bioA"
                     /locus_tag="O6Y56_001081"
     CDS             17746..19104
                     /gene="bioA"
                     /locus_tag="O6Y56_001081"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDB5574356.1"
                     /translation="MNYTQQLKQKDSEYVWHPFTQMGVYSKEEAIVIEKGKGSYLYDT
                     NGNKYLDGYASLWVNVHGHNNKYLNKVIKKQLNKIAHSTLLGSSNIPSIELAEKLIEI
                     TPSNLRKVFYSDTGSASVEIAIKMAYQYWKNIDREKYAKKNKFITLNHGYHGDTIGAV
                     SVGGIKTFHKIFKDLIFENIQVESPSFYRSNYDTENEMMAAILTNIEQILIERNDEIA
                     GFILEPLIQGATGLFVHPKGFLKEVEKLCKKYDVLLICDEVAVGFGRTGKMFACNHED
                     VQPDIMCLGKAITGGYLPLAATLTSQKIYDAFLSDSHGVNTFFHGHTYTGNQIVCTVA
                     LENIRLYEKRKLLSQIETTSSTLEKQLHALKRHRNVGDVRGRGLMFGVELVTDKDSKT
                     PLEIEKVERIVRNCKENGLMIRNLENVITFVPVLSMSNKEVKTMVRIFKKAVHNILDR
                     KC"
     gene            19106..20113
                     /gene="bioB"
                     /locus_tag="O6Y56_001082"
     CDS             19106..20113
                     /gene="bioB"
                     /locus_tag="O6Y56_001082"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HDB5574357.1"
                     /translation="MNLAKRILQGEQLTKETVLKIYEDTNIDTLDLLNEAYILRKHYF
                     GKKVKLNMILNAKSGICPENCGYCGQSRDIKEKQRYALIPEEQIIDGAKVAHDNHIGT
                     YCIVMSGRGPSDKEVDHISNTVRTIKSQHPQLKICACLGLTNDEQAKKLKSAGVDRYN
                     HNINTSENYHDNVVTTHSYKDRTDTIELMKANNISPCSGVICGMGESNQDIVDMAFAL
                     KEMDADSIPINFLHPIKGTKFGSMDDLTPMKCLRIVALFRLINPTKEIRIAGGREVNL
                     RSLQPLALKAANSIFVGDYLITGGQPNQLDYDMINDLGFEIDYDTCENKENKNDVSRA
                     N"
     gene            20091..21206
                     /locus_tag="O6Y56_001083"
     CDS             20091..21206
                     /locus_tag="O6Y56_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HDB5574358.1"
                     /translation="MMFQEQIDLLQQKGLYRSLKSVGYIDRQYIEVENKRCTNYTSND
                     YLGLGQIAFDKDDFERFMRKYSYHLSSSRLISGSSTAYEEIETMLAGWLGYSACTILN
                     SGYDANLALFNIFKNTNCVVFSDQENHASIIDGIKLSGLEKVIYKHLDIADLEKRLAE
                     CPNQNIQKIIISDSVFSTNGDVVDIGQLVSLKHKYNATLILDVSHSFGIENYSNYQGV
                     DILTSSLSKACGAYGGVILSSNDVKDMLINHGRPLIYSSSLPIYNLYFIKRNIEKLIN
                     ADDRRTKLNSLSKYFNQKLKALNVNYNSSNSPIKFIEFDDIEAAENIHQTLLKHHVFT
                     SYLRYPTVTKPMLRISLSYFHTEQDVDRLFEILHQED"
     gene            21217..21909
                     /locus_tag="O6Y56_001084"
     CDS             21217..21909
                     /locus_tag="O6Y56_001084"
                     /EC_number="6.2.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxyhexanoate--CoA ligase"
                     /protein_id="HDB5574359.1"
                     /translation="MYSIKMRSSNQDVHISGAETICEFDKIEQTVQRFYNKGFFHENG
                     QPDFLNIKIQKIMEPIQQIKALQIIEDDKANLQHLTQECGVTEQALNQGMTYIKNETV
                     YTGAIILSAISGKRLDSFGQRGIRATHFSFEDINNKGDLNERVTDALAIASCINAHPY
                     IKGELCVSDDLTYTTGYFASAKIGYHRLFDIKPVNTRYGGRIIFVDDRIDLNHYISFL
                     ESTPKQVVYETV"
     gene            21920..22387
                     /locus_tag="O6Y56_001085"
     CDS             21920..22387
                     /locus_tag="O6Y56_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QueT transporter family protein"
                     /protein_id="HDB5574360.1"
                     /translation="MTSKDITQISVIAAILTILAVLKIPSIIPGLDFQLSAPVALLIL
                     AFFGIKKYFLGGLLSSVLLLIFGVFNPINVIISIIFRVIAIAVVYLLKINVLSLILAS
                     VLGSLISRLLLSIILNLPVWVVLLNAIPGVIFTLIVAIPLYLTLRKRMAVLLR"
     gene            complement(22439..23416)
                     /gene="hlgB"
                     /locus_tag="O6Y56_001086"
     CDS             complement(22439..23416)
                     /gene="hlgB"
                     /locus_tag="O6Y56_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component gamma-hemolysin HlgAB/HlgCB subunit
                     B"
                     /protein_id="HDB5574361.1"
                     /translation="MKMNKLVKSSVATSMALLLLSGTANAEGKITPVSVKKVDDKVTL
                     YKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKATGNINSGFVKPNPNDYDFSKL
                     YWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNG
                     NTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNEL
                     FLAGRQSSAYAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMD
                     LYQIRWNGFYWAGANYKNFKTRTFKSTYEIDWENHKVKLLDTKETENNK"
     gene            complement(23418..24365)
                     /gene="hlgC"
                     /locus_tag="O6Y56_001087"
     CDS             complement(23418..24365)
                     /gene="hlgC"
                     /locus_tag="O6Y56_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component gamma-hemolysin HlgCB subunit C"
                     /protein_id="HDB5574362.1"
                     /translation="MLKNKILATTLSVSLLAPLANPLLENAKAANDTEDIGKGSDIEI
                     IKRTEDKTSNKWGVTQNIQFDFVKDKKYNKDALILKMQGFISSRTTYYNYKNTNHIKS
                     MRWPFQYNIGLKTNDKYVSLINYLPKNKIESTNVSQTLGYNIGGNFQSAPSLGGNGSF
                     NYSKSISYTQQNYVSEVEQQNSKSVLWGVKANSFATESGQKSAFDSDLFVGYKPHSKD
                     PRDYFVPDSDLPPLVQSGFNPSFIATVSHEKGSSDTSEFEITYGRNMDVTHAIKRSTH
                     YGNSYLDGHRIHNAFVNRNYTVKYEVNWKTHEIKVKGQN"
BASE COUNT         8342 a         3535 c         4400 g         8105 t
ORIGIN      
        1 gtgcctaatg agatttattt tattatacca gttctattga ataaattaat taaagaggta
       61 tatttaccat tatttttgac accttatatg ttaataggtg tataattaca taaaaaatat
      121 taattaactc tctatacttt ttggaaagat aggcgtatag tgatatccat caaaaagtat
      181 aaaaaggaat aggagattat gttcaatcaa tttaaaagac ttattatagg gcaacctaaa
      241 aaaaacagag aactaaaaga cgaaaagata tcgaagttta aagggttagc gattctttcg
      301 tcggatgcat tatcttcagt ggcttacggt cccgaacaaa tactgattac attatcagta
      361 gtgggtgcag ttgcaacttg gtatacttta ccgattgcag gtgctgttct gatcttatta
      421 gctgctttaa ttatgtctta taggcaaatt atttatgcat atcctaaagg tggcggcgcg
      481 tatatggtgt ccaagactaa tttaggagaa aaatggggat tgcttgcagg aggctcatta
      541 ttagtcgatt acatactgac tgttgctgtt agtatatcat ctggtgctga tgcatttgtt
      601 gctgcattcc caagtttata tgggcataaa gtactgattg catgtttact tgtacttttt
      661 attttaatat taaatttacg tggtttaact gaatctgcca ccgtattatc ctatccagta
      721 tatctcttca ttatagggtt agtgatatta atatttatag gtactttccg tgtggcgaca
      781 ggagatattc aaccacatat gcatgcatca gtaggaactg cggttcctgg agtaacatta
      841 ttcttgctat taaaagcatt ttcatcaggg gcttcatcat taacaggtgt tgaagctatt
      901 tcaaatgcgg taaccaattt tagagaacca agtgctaata atgctgtaaa aacgttaatt
      961 gctatgggtt caattttagc gtttttatta gttggtatcg ttggtttagc atatgtttat
     1021 ggaattatgc cacaaacgga aacgacagtt ttatcacaat tagctatgca aatatttggt
     1081 gataatgctg ccttctattt tgtacaggca acgactgtga tgattttggt attagcagcc
     1141 aacactggat ttacagcttt tccaatgtta gcggcttcaa tgtctaaaga taaatatatg
     1201 cctagaatgt ttactgttag aggtgatcgc ttaggctact ctaactcaat tattatttta
     1261 ggtgtattag ccattatttt aattattgta tttgatggta tgactgaaga tttaattcca
     1321 ttgtatgcgg ttggtgtatt tattccattt acactagcac aattcggtat ggttattaaa
     1381 tggattcatg aacgtcctaa gaattggtta agtaagttgt ctgtgaactt acttggtggt
     1441 atcgtgacat ttattgtttt tatgatttta ctcataacta aatttagcca agtatggccg
     1501 atacttattt tcttgccgtt cgtggtgatt ttcttcttga aaattaacaa acattatcga
     1561 gatatcgcag aacaattacg ttctgacatt gatgttctta atgtggacgt ggtagatcgt
     1621 aatttagcaa ttgtgccgat aacaagtatt acaacagcag ttgataagtc tatttattac
     1681 gcacaaatgc ttgcgaataa tgatgtcata gcagtacatg tatcatttgg agatgaagat
     1741 gaaaaagcat tccaagagaa atggaaacgt catttcccag atgtaagatt agttatttta
     1801 cactcggaat atcgcagtat tatacgacca atttcacgtt ttatcgataa gattaatcgt
     1861 aaagccaacg atcaaaacta tatgattaca gtagtgatac cagaatttat tactaagaaa
     1921 cgttggcata atttattaca caatcaaact agtttgcgta tgaaattgta tttaatttat
     1981 caaaagaatg ttaacgtatg tacaattcca tttaaactta aaaaatagat tctataatca
     2041 aatcggattg atgaaaggtt attacttttc atcaatccga ttttttgatg ttgaatataa
     2101 aaaccccgta catatgagat gataatgact ttgtctcata tgtacggggt gttgttatat
     2161 cttgcttaat gtttggactg taaagacaag acaatttcgt tgtaattgat attttctcga
     2221 atttgagctg caacgatatt gttgatttta tttttgcgaa ttaattcatc taaaagatga
     2281 cgttgtaagt acaatgcttc caatttgtgg ttatggaaca tagcttgcgg tatgatttga
     2341 ttgctgtttt cttgacgttc ttttcgacgt tgtgcacgcc actttaatga gcgactcata
     2401 tcatagtaat gattaatgac taagctaacc tcaagtacat ttgtactatt ttgttcttct
     2461 tttaagcgta aaataatatt gtgattcaca atacgcataa ttttttgaac atctttgaat
     2521 gaattttcaa attcttgctt cttagattct ttgtttaagg ctttgtagtg cttcatcgct
     2581 ttaagtctaa gccataacat cttgaagaag tttgcaaatt tttcaacaaa tgaagcagta
     2641 cggtgtgtct ctgttaattc gacaatattg cggtaattat ttatatcctg atatgttgcc
     2701 ttacctttat caattaaacg ctcaagtgta gatgtttcga ttacttttgc aatatcttct
     2761 aaacgtttga gttcttttgt attttgatta tcaggttctg aatttaataa aaataacaat
     2821 tctccatagt attggtttaa tactgggcga taatttgtat cgtttttgtc ttttttactt
     2881 tcgtttttaa aatgctggat cactttttga acaatgaaaa ttttggcaga ttgataagtc
     2941 atacctttaa aagtagtatc ttcggcagat ggtgtaatta aaggtaaaac aatttgcgct
     3001 aagattaaac taattaatac catgaaagat gcaataaaca ataaatcatt acggtattcg
     3061 aatgcttgtc cttttgtaat gataaatggt aatgtaagtg ccattgaaag tgaaattgta
     3121 ccgtgaatac cacacatcgt cataataaat gcgtaacgca cacgagaagg tggtgtttca
     3181 tgtgaatcat gctcctcgtc tagataagat tgtatatttt tcgggaaata aaaatctttg
     3241 taccagaaat aaacccaaac aaatcgacat gcataaattg caatagcgat taatatagtg
     3301 atcactatta aaaatgaaaa gttgtcaggc tctgtttgga aaatatctat gactacagtt
     3361 ggaatcataa aacctaatac aacaaataca aaaccattta aggcataact aaatgtgttc
     3421 caaatttgat ggtaattcat ttgtagttcc gtttgtgctc taattaaacg gtcgcgttct
     3481 aaaccatgga ttagacctgc gattacaact gcaatgatac ccgaagcatg aacttcttct
     3541 gctaaaaagt atacgacaaa aggagttaat aattgaataa aagttaaggt attgttatct
     3601 tttaaacctt tattagcggt taagtctata cgtattctaa cgacaacgaa tccaataatt
     3661 gcaccaataa gtacacctag tattgttgaa atgataaatt gttcaacagc ttggaataat
     3721 gaaaaggtac cagttactaa tgcagtaaca gcaattttaa atgaaatgat acctgctgca
     3781 tcattgagta aagattcacc ttctaaaatc gtcatagaac ctttaggtaa taattttccg
     3841 cgtgtaatag cagatactgc tactgcatca gtaggacata aaattgctgc tattgcaaaa
     3901 gcggctggca ttggtaaggc aggccaaatc caatgtataa aatagccaac accgactaca
     3961 gttgcaaaca ctagtgccat tgacattaat agtataggtt tacgatattc taataatttt
     4021 gttcgagaga cgtgggtacc ttccacaaaa agtagtggcg cgataacggc aaacataaat
     4081 acttcagaat tgaattggaa atcaacttgt attggaataa tgaaaataac gacacctaat
     4141 gcaatttgaa taaaggcagt aggaatttgt gggaatcgat tattgataac cgaactaata
     4201 atcacagcaa aaataaaaat taaaaatgct tctaatagtg ccatacaata ctcctcaaaa
     4261 ttttaatagt taatatttta tcacttttaa ggcataatga catagatata ttgataaaat
     4321 gaagttattt tcaaaaaaac tctagtatcg gttgaactga tactagagcg agatgtttaa
     4381 attattgatt gtcatatctg aaatgaccgc tgtcattttg tcgttgttca tatgcgagct
     4441 tttcagcatt cgttttgtat tttttataaa agaaaaataa aaatataaac cagaatggcg
     4501 aaatataaat agctgctctt gtttcgtcac taaagaataa taaaacgaat acaaagaaga
     4561 agaacgctag aataatgtaa gcaataggct taccaccaat caacttaaat ttactgtttt
     4621 tatgtgcctc aggatgcttt ttcaaataca ttagataagc gacaataatc attgcccaaa
     4681 caactaaaaa caacacagtt gataacgttg taacgtatat gaatagttga attgcattag
     4741 ggaaaatgta gtttaacaag gctgctataa gtaatgcaat tgatgagact aacattgata
     4801 aataaggcac gccatgacta ttcgttttat ttaaaacttt aggacctaac ccttgttgtg
     4861 acagtccgaa taagatacga ctattcgaat agataccact atttgtagca gaggccgcgg
     4921 cagttagcac gacaaagtta acgacacctg ctgcaaatgg cacgccgatt aatgtaaaga
     4981 gtttaacgaa agggctacta tttggatcga tatcattcca aggtatgact gacataatta
     5041 ctaatagacc accgatatag aataataaaa tacggatagg tacattatta attgctttcg
     5101 gtaaggtttt ttcaggatct ttcgtttcac cagcagttac acctataagt tcaataccaa
     5161 tgaatgaata tacagcaatt tggaatgaca ttaagaaacc aaatgttcct ccagggaaca
     5221 tgccgccgtg actgattaag tttgtgaatg atgcatgtcc ataatgtgtt ttaaatgaga
     5281 aaaagattaa tacaagacca acgataacca tcgcaataat tgtgacaact ttaataatag
     5341 agaaccaaaa ctccagttca ccaaataatc tggcacctaa taagttgaag ctaatcaaga
     5401 ttaaaacaat aaatagcacg gtaatccaat ttgggacttg tggataccaa aatgcaaagt
     5461 attgtcccat cgcagttaga tctgacatac ttgatacaat ccaacataac cagtaagtcc
     5521 agccaatgac aaatccacca aaagggccta aatattcatt tgcaatatca acaaatgaat
     5581 taaatcttgt attgctcaac aacaattcgc ctaatgcgcg cataaaagcg aatagtacaa
     5641 ccccaataat catgtatgtg aataacagtg atggaccagt taaagatatt gtttgacctg
     5701 atcctaggaa taacccagtt ccaattgcgc ccccaattgc tatcaattgg atgtgtctgt
     5761 tattcaactc tctatgcaat tttcttgcca taattttcct cctcaggata aagcaaataa
     5821 aaaagttgtg tgtaagcgtt ttcttaatta taaatactaa agaaatccat ttaataaagc
     5881 aattattttt ttaaatataa gaaaaaacat ttgataggta agggtatgat aactaaaact
     5941 tatcgatttt ttgaaaagat ataagttttt atgcaaaaat ataaaataat catctaaatg
     6001 aagcagttaa ctatatatat tagataagct atggcataat aaataacatt ttaatttgag
     6061 taaagaaggt aagggtatga agatagggac aatcgccgat ttacatattg atcgtcataa
     6121 taaaaaaaca tccaaagatt acttagaggc attggttgaa acagttaagt ataaaaattt
     6181 ggatatattg ttgattgcgg gagatatctc aaatcattat caattgacgc accaatttat
     6241 aacgcaattg acaaaacaat tagatatacc tgtgaaattt gttcctggaa accatgattt
     6301 atgggaagtt gaaagtatga ctacgcaaga catttggaat aattataaga gtatgtcaca
     6361 gtgcttggta ggaaaaccat ttatagtaaa tgaagaatgg gcaataatag gacatacagg
     6421 ttggtatgat tatagctttg cagcacaacg attttcatta gatgagttac aaagaggaaa
     6481 acattatggt gcgacttggc aagataaaga acgaatatct tggggcatat cagatcaaaa
     6541 tttatctaaa atagcggctg aacaagtgaa gaaagatata ttagaagtag gaaatagacg
     6601 agtgatttta gtcacacatg ttgtgacgca ccctgatttc attgttccta tgccacatcg
     6661 tatattcgat ttttataatg catttattgg gacaagtgat ttcaatcctt tgtatgcgat
     6721 gttcgatata ccatatagta ttatgggcca tgttcatttt cggaaaagtg tgatggatga
     6781 tggcagatgt tatctctgtc cgtgtctagg ctatccaaga caatggcgtt cagaagatat
     6841 ttaccaggaa ataaatgaga cgatacaaat aatagaaatt taaaatgcgc aaacctgacc
     6901 cagtttgcgc attttatgtt ttacacacgc gagtaatgtg tttacttacg tgtgtttatt
     6961 ttgttgctga ttttcaattg tatatgaatg tggttgcaca taaatgcact ttcttcctgg
     7021 tgaattaaag ctgtattcca ttttctcttt acgaatttta ataatttgtt tgcgatttgg
     7081 aatgatggca ggtaaaacta ggccacgacg aatatgactc caaagtggat cgatataata
     7141 gtaatagtaa tcatcgtacc caatgagtaa cgttacgtga atatttgaaa cttgtttcgc
     7201 tggcttgtta tcaaagcgga aaacacgtag taatggttta gaaccaagat tagtatggta
     7261 tattaacaca ggttgacctt gatcaataat acctttaaga tcttctaagg atttaccagt
     7321 gccgtctacg atattaggat tgtatttttg taaaaatggt acatatgctt ctggaaatat
     7381 cgtttgatga taattgccaa gcttaatgaa taagtgatgt ccaacataac ctttatgtgg
     7441 attgttcgga tgtgtcggcc aatgtctcat aatttctgta gcagggatat gttggttatt
     7501 gtattgcaac atcatggctg cggaaacacc ttcacacccc atgaccatag ggataggaaa
     7561 tagctgactg ataggtttaa ctggtaatat ttttcggttc ataatatagt cctcgcattg
     7621 attcaataaa tatttaatat aattatatag cgtcaatgca aaatgtccta aacatatgtt
     7681 ttacatgagt gaataaaatt aatggagtga taaaatggaa tatcaattac aacaacttgc
     7741 gtcgttaatg ttagtaggta ttaaagaaac gtatgaaaat ggacgacagg ctcagcaaca
     7801 tatagcagga ttttggcaaa gatgttatca agagggagta cttgcggatt tacagttaaa
     7861 aaataatggt gatttagccg ggatacttgg cttatgtata cctgaattag acggtaagat
     7921 gtcatatatg attgcagttg ccggagataa tagtgatgat attgaaaaat atgatgtcat
     7981 aacattagca agttcaaagt atatggtatt tgaagcacag ggcgcagtac ctaaagcagt
     8041 tcaacaaaaa atggaagagg ttcatcacta catacatcaa tatcaagcag ataaggtaaa
     8101 atcagcacca ttttttgagt tgtatcagga tggtgatact acaagtgaaa aatatattac
     8161 agaaatttgg atgcctgtta aagggtgatt gaatagaaat gtacttgata tgaaggcgta
     8221 attttagttg aagattggat ctcataattc ataaagaaga accccgacaa agatagatat
     8281 ctttgctagg gttctaatta tgttgaagtg ttatgcgaca tgttgctttt taatcatttt
     8341 aaagtaaatg atttgtagac agactaatag aatggctgta atgaagataa taatcatata
     8401 tggtgatgta ttaaattcgc cttttaagcc aactaatggt gcaacagcac cacctaagat
     8461 aaattggaat aagccaagta aacttgatgc gttaccactg ccacctgttc gttcttccat
     8521 agccattgtg aaaccaagcg gtccaattga cgtcacagga cacacattta agaagaatgc
     8581 gatgagtaag acccaaagtg gtaaatggaa tgtaagtgtc aggataatta aagcaacacc
     8641 taccacttgt ataatagtta aaatgattaa taatatgtgg cgatgtaatt tttctactaa
     8701 taaagcaacg acttgactga caatgattaa acctacaccg ttaacagcaa acatgatact
     8761 aaattgttgg ggtgtcatat tatacaattt ttgagtaata aatggcgatg cagatgaata
     8821 actaaatagc attacataag ttaaaccttg taatagcatt ggaataataa atgctggttt
     8881 tttcaaaaga cttccaaagt ctttaatgac gctactaaaa ttcacctgct ttaattcatc
     8941 tttagatgtt ttaggtaatt gagaagcgac gccaattaaa atgatgagtg ccacaatagt
     9001 taaaattgtg aaaatagaac gccatgttgc tacggataaa gctaatccac cggctaatgg
     9061 tgcaagaata gtgatgatgc cattaactac cattaaagat gctaaaaatt tagcgagtgc
     9121 gttgccacta aatttatcac cagcagaggc tttggcaata acgatgacgc caccacctgt
     9181 caaaccttga ataaatcgta aagttaagaa taatggcaat tgatcaacaa acatagacaa
     9241 acctgatacc aaaatgaaaa tgattaaaat ggatacagca atgcgtttgc gaccaaaagc
     9301 atcggataaa ggtccaaaga taaattggcc tagtgcaaga ccaatcattg tgaatgataa
     9361 tgttaattga atttctgatg tagtagaacc aaaatcacct tgcactttag gtaatgatgg
     9421 tacgtacata tctatagtta gtgggccaaa agcggtcatg acgcctaacg taattagcaa
     9481 taaaaatgaa aaatgcttcg ttttggtttt cgaagattgc atgatcagac tcctttaaat
     9541 gatataatta tataaattat atacgttttg tgtgtatttg tatgtagtta gaatacaagt
     9601 ttatataaaa aatccctata ctcttaatgc atcatcacga ataacgtagt gatacaaata
     9661 aagtataggg aattaatgtt tatcatcaaa agcaggttta ataattaatt agcgccacca
     9721 ttgtcatctt taaataagct ttctaattta gatttaatac tgtcgaattt tgtattaata
     9781 tcatttaaca tgctttcaat tttaccttgg cttgcattgt ttttaagtgc attatttgcc
     9841 tctgtcaatt tgttgatttg gtcttgataa aattgagtta gcttagaatc agctttgttt
     9901 tgttcttgct gcttcaagtt gtcgatttga ttttgtaaat ttttaataat gtcatcagtt
     9961 ttttggttgt ttttaatatt ttctttagca ttatcgactt gctggttaat ttggccgtct
    10021 tgattttcaa cttgtttttt ataattttga gagactttag ggtcattact aactttatcg
    10081 ctatcattgt taagtaaggc gcgtgtgaca aaaatagcga caataattaa gagaatggca
    10141 ataatgatat ataaccattt ttttgaacgg cgggatttct cgttttcttc ttcaagaatt
    10201 tgttctcttc gataatctct accgttatag tatcgttccg ggtgttcttc aggatcacct
    10261 ttagcatatt gttgtctata cgatgcgtct tcagattgac gacgatgatt ttggttttga
    10321 ttgtcgtatt gatatgaatc acggtattta tcagttcttt tcatgggttt cacctcattc
    10381 aagttttaac tgcaaataat aaagctgatg attgactttg acattattgt aatttcagaa
    10441 tacgagcaat gtcagttgca gtgtttaata aattttgttc gctattttgt aggacatctt
    10501 ctaaagtgct aggtgaagag attatagaat aggcactatc aataccgaaa tcgtaaacat
    10561 gttgataatt ttcgcctaga ctgccacaaa tcgcgatgac aggaatatga tattgttttg
    10621 cagctaacgc aacgcctacg ggtgttttac caaagatggt ctgataatcc atgcgtcctt
    10681 ctccagtaat aacgaggtct gcatctttaa ttctttgatg aaaatctgta atgtcaaaga
    10741 cgacatcaat accttttgtt aaagttgtct cacaaaacgc taataatgct gcgcccatac
    10801 cgccagctgc accagaacct ggtatttgat taacggactt tcctgtgcac atttttatct
    10861 tatcatgata atgcgacatt gcgaaatcca actttggtat catctttgca tcagcgcctt
    10921 tttgaggacc ataaatatag gtagcaccat tttcacccaa taaaggattt gaaacatcgc
    10981 aggccacttt aaaggtcact tcttttaatc gcgaatctag attggttata tcgatttgtg
    11041 caatgtgagc aagattagca ccattcattt gtaataagtc cccgtttaca tcagtaaact
    11101 ttacgcctag tgcacttagc atacctgtac caccgtcatt tgttgcactg ccaccaatcc
    11161 ctaaaataat ggtcttagca ccatgattta atgcatcttt aattagttca ccggtaccat
    11221 atgatgatgt gtataaagga ttacgttcct ctttttctaa taaatccaaa cctgacgctg
    11281 ctgccatttc aataattgca atttgttgtt cgtctgcgcg tgcataacat gcttcaatag
    11341 gtcgcattaa agggtcatta acgatgactg tatacttagt agcacctgtt gcatgcatta
    11401 aagcatctgt ggtaccttca ccaccatcag ccatcggaat gatatcataa tgaagggtat
    11461 tcccataaac attagtaaat gcctgtttta taatattgcc aacttgctgt gcggtcatac
    11521 tttccttaaa tgagtcagga gcgatgacaa ttttttgtaa ttgcatagta gacatcctct
    11581 cattactgtt gtcgctctta ttgtatataa aattactagt gaactaaagt aatctctata
    11641 gtgctaatga gtcgcgcgat aaatcagtta cattataatg gcgtataagg atcaggggaa
    11701 agagactaaa tttgctgtga aagggtataa aaactgaaat aagtatattt gaagagaagc
    11761 ggattggctc gcatattcga gtatgttgga gaacgcagtt atacatatat tttgatgttg
    11821 aggagttaca catatgaaac taacacaaac gcatgctgaa attttaaaat ttatcattgt
    11881 tggcggcatt aatacgttaa actattatgt tgtctattta ttgctgttaa aattattaca
    11941 cattgaatat atgattagtc atattaccgg atttatagtc gcttttgtga tttcgtatta
    12001 tttgaattgt tattttgttt acagggtaaa acctacttgg agaaaattca ttagttttcc
    12061 aattacgcag attgtcaacg taagcttaca aacagtttta ttatatgtat ttgtatcctg
    12121 gctaaatttg ccagcagaaa ttgcaccatt tgctgattta attattacga tacccatcac
    12181 atttatatta tctaaatgga ttttaaaaga tagtaattaa agtagcgtaa accactaaaa
    12241 aacgctttac tcgaacttta atattgcgtg aaatataata aataaatgat ataatataat
    12301 ggtcgcctaa catctcgggc gttactttaa cgcagagagg aggtgtattt agatgttcaa
    12361 tttattaatt gacatcatga cttcagcttt aagcggctgt cttgttgcgt tttttgcaca
    12421 ttggttacga acgcgcaaca ataaaaaagg tgacaaataa ccaacaccta aataaatccc
    12481 ctcactatgg cagtagtgag gggatttggt gtatttagat gttcaattta ttatgtaact
    12541 aattatagca ttgatgaaca aggtgtgcaa tgtattttta caatattaca attaatggat
    12601 ttaattatat ttgaattaag tattttgaaa aatgatttaa tagttgagtc ataggatcat
    12661 tagataaaga gaataatcaa ttatagggac attgggatac aaatcaatgt actagactct
    12721 acaaggctat actcagggac ccaacataga gaaattggat tcccaatttc tacagacaat
    12781 gcaagttggc ggagccccaa catagagttt tactcatgta ttcctatttt taagtacata
    12841 ttagctgtgg ctaaggataa agaatcatta cataataaat cattagtggc tctttatcat
    12901 ttctgcccca taacattgtg aatttttaaa agaaatgtgt cacaaatcca cgcgacattg
    12961 ataatcgtta tcaactaata tatgatgtac ttgtaataag tattaatttt taacaaataa
    13021 caaatttata ttatgtatat catccagtga aataaataat ataagcggct taatttagat
    13081 tattaattga aaggagttac atatacgatg aacaatcaga caaattggat aaagatactc
    13141 agcggatttg cttctgatag taaatggaaa attatgttat caattttgtt gtctatcatc
    13201 agtgtctttt ctggattagt tccatattgg gcagtcttta aaattatttt aatgatgatt
    13261 aacaatgcat atacgattaa ttcgattatg gtttatatct ttattgcttt aatcgcttat
    13321 atttcacaag tgtgttgttt tggagcgtca acgatgctat cacatattac ggcatatgaa
    13381 attttatctg aaattcgtaa aaaattagct caaaaattaa tgcgtctccc tttaggcgta
    13441 gtggaatcta agaaaatagg tgaattaaaa aatatatttg tcgataaggt tgaaacaata
    13501 gaattacctt tagcacatat gattcctgaa gttataggaa acttactttt gtcagctgct
    13561 atctttttat acataatgct cattgattgg cgtatggcta gtgccttatt agtaacgata
    13621 ccaatttcaa ttttcgcttt taaaaaagtt atgtctggat ttaatgagac atatgctgaa
    13681 caaatgaaat cgaataatta tatgaatagc gccattgttg aatatattga aggtattgag
    13741 gtaattaaaa catttaatca atctcaaagc tcgtataaaa aatatcaaga tgcagtagat
    13801 aattataaaa tacatacttt aaattggttt aaaaatacat ggggctatat gaatttaggt
    13861 gcaagtgtac taccttcgac gtttttaggg attctacctg ttggcatgta cttgatatct
    13921 atcaaccaat taaattatgc agaatttttt atttgtattg tattatctct cggtgtcgta
    13981 gcaccgatta agaattttac taattatgtg aatcatttaa aatcaatcca atatgcgtta
    14041 actgaagtaa atcaaatatt aatcttagaa gagttagcat tgtcatcacg atttatggaa
    14101 cctcaaagtt atgaaattgc ttttaataat gtgggttttt catatacaaa tgataaggac
    14161 gaaagagtct ttaagaatct atcatttacg gtaccagaaa atcattttac ggcgattgtt
    14221 ggggaatctg gtagcggtaa gtcaactata gctaagctca tatcaaggta ctgggatgta
    14281 acgactggag aaatcacgat tggtaatgta aacataaaaa atatagaaca aaagcaactt
    14341 aacgaattag ttggttatgt aggacaagat aactttttat taaatcttac ttttaaagaa
    14401 aatattaaac ttggcaatcc agaagctacg gatgaggcag ttgaaaaagc tgccaagtta
    14461 gcacaatgtc atgaatttat tgaaaagttg ccagatggat atgatacgaa tgttggtaca
    14521 gtgggagata aattgtctgg tggtgaaaaa caacgagtca ctattgcaag aatgatatta
    14581 aaagatgcgc ctatcattgt attagatgaa gcgactgctt acgttgatcc agatagtgaa
    14641 caaaaaatcc aagaagcact aaatgtgttg acacgcaata aaacgcttat agttattgca
    14701 catcgtttat ctactattca acatgcagat caaattattg tattaggtaa tcaacaaatt
    14761 ttggagaaag gctcacatca attgttgcta aaattagaag ctcattacaa aaatatgtgg
    14821 gatatgcata tgcatacaaa agactggggt atcaataccg aaagtaatta agttgatgag
    14881 taaaggaggt taaacatgtt taggattaca tttaagattt taaattgggt atcgccatat
    14941 aaaacaagga tggttttagg atttatcatg tcatttttaa atgcaatatt tattgcactg
    15001 cctatttttt tggcttcaca aatatttaat aatgtagtat ctaataaatc tatatatgga
    15061 aaagatattt ttaatgttgt aatcatcatg attatattag tgcttggtcg gtttattaca
    15121 gcatatttga aaagtaaaaa tcaggagagt attgcttatg aaatgagtgc gaatgaacgt
    15181 ttaaatattg gtaataaatt aaaaaacgtt cctttaggat attttaatac gcatcactca
    15241 aatgagttaa caactattgt tactacagat ttaacatttc tagaaaactt tgccatgaaa
    15301 atggtggata ttgtcattaa tggatacata ttaatttcag tacttatctt gtctttattg
    15361 gtcgtatcat ggcaagtagc attattagca tgcattggtg tattattatc atttttagct
    15421 attcaattat tggaaaacaa gagtaaaaaa aatgcgccaa cgtatcatta tgcacaaaat
    15481 caattaattg aaaaagtggt agaagttatc cgtggcattc aagtaataaa atcattcgcg
    15541 aaagaaaata cgagtcttaa aagttttaac caagcagtca atgaaagtaa acgtataaat
    15601 acaaaaatag aaatgcaata tatcccattc aatttattgc atttacttag tttaaaagtt
    15661 gtttcaataa tgattgtatt agttgcatgc ttattatata tgaatcatag tattgattta
    15721 cctaccctta ttatgatttc aattttttca tttgtgatat ttgatagtgt tgaaaatatt
    15781 aatagtgctg cacacgtact tgaaatgata gatatgacga tagatgatat tgaaaagata
    15841 aaaaatgctc cagaactgga tgagaatgga aaaaatttga cgattaaaaa tgaaaatatc
    15901 gcttttcaaa acgtgaattt ttcatatgat gataaacaag tgataaagaa tgtgaatttt
    15961 gagataccta cacaaacatc aacagcaata attggacctt caggaagtgg gaaatctaca
    16021 ttatgtcact tactcttgcg cttttatgat atcgatgatg gaaatattcg catcgatggt
    16081 gttgatatta aagatatgac attaagtacg ttaatgtcga aaattagtgc agtatttcaa
    16141 aaggtgtatt tatttaatga tacgattgaa aataacatat tgtttggcaa tccaggtgca
    16201 acgaaagaag aaattattcg tgcagcgaag caagcatgtt gccacgactt catcatgtca
    16261 ttacctgagg gatatcaaac aatgctaaat gaaaaaggta gtaatttatc tggcggagaa
    16321 aagcaaagga tttctattgc tagggcgata ttaaaagatg caccaataat tattttagat
    16381 gaagcaactg caagtattga ccctgaaaat gaacagctga ttcaaacggc aattaatgaa
    16441 ttaagtaaag gcaaaacagt aattacaatt gcacataaac ttgaaactat taaaaatgca
    16501 gatcagatta tagtgctcaa tgaaggtgaa ataattcaaa aaggtagtca tgatgaatta
    16561 attcgaaaac caggaatgta tcaagacttt ataagaataa aaagtaaatc agcaggctgg
    16621 aaattataaa taatagttta atatggaatc agaatttgga aataaaaagg gtgatagata
    16681 atcaacagca aaataaatcc cctcactagg gcaatagtga ggggatttgg tgtatttaga
    16741 tgttcaattt attatgtaac taattatagc attgatgaac aaggcgctca acgtaatatt
    16801 acaattaatg aattgtttca caacatggta aagctaggat gtctttttat taagaaataa
    16861 tgcaattatt aattttaact gacatatttt atcgaatcgc tgtttatatc tgtccgaatt
    16921 ccgtaagaag ccttagtcat ttcaatagca aggtcaaaat tttgacaaaa tttatagtta
    16981 tactgagaag tttaaattca tgttttcttg aaaaacatgc gccttaaatg taaacttatt
    17041 aattataaaa gtttacattt ggattgaggt gcttattttt tatgaggatt tttattacaa
    17101 gtacgaatac tgatgtaggc aaaacctatg ttacaaagca tttataccat gctttgaaaa
    17161 gacgtggtca tcgtgtttgt gtttttaaac catttcaaac tgaggaacgc caagacggga
    17221 cgtttccaga tttagaagta tttaaaaatg aatgtgattt aagctatgac ataacgtcac
    17281 tttatacttt taagcaacct gtatcaccac accttgcatt taaaatggca gatcaaattt
    17341 ttctaaataa gcagcgtgta ttagataagg taaaagtttt agataaggaa tttgatttta
    17401 tcttaattga gggtgctggg ggaattgccg taccaatata tgaaggtaca gatgatttct
    17461 acatgactaa agatctaatc aatgattgtg cagattgtgt cattagtgtg ttgccatcaa
    17521 aattaggtgc tattagcgat gccattgttc accaagatta tgttaatcag aatgtatcgg
    17581 cgagtaattt tttaattatg aatcgctata cagacagcta tattgaaaaa gacaatcaaa
    17641 ttacgattgg aaaattaaca aataaaacag tctatacatt tgaagaacat gccacgtatg
    17701 aaaatttctc agaagcattt ttaaaacaat taataggagt taaaaatgaa ttacacacaa
    17761 caacttaaac aaaaagactc agaatatgtt tggcatccat ttacacaaat gggtgtatat
    17821 agcaaagaag aagcaatcgt cattgaaaaa ggaaagggta gttaccttta cgatacgaat
    17881 ggcaataaat atttagatgg ttatgcatcg ttgtgggtca atgtgcatgg tcataataat
    17941 aaatacttga ataaggtaat taaaaagcaa ctcaataaaa ttgcccattc tacgctgcta
    18001 ggatcatcaa atattccatc aatagaactt gcggaaaaat taatcgaaat cacgccgagt
    18061 aatctaagaa aagtatttta ttctgataca ggcagtgcgt ctgttgaaat cgcaataaag
    18121 atggcatatc agtattggaa aaatattgat agagaaaaat atgccaagaa aaacaagttt
    18181 ataacgctaa atcacggtta tcatggggat acgattggtg cggtaagtgt tggtggtatc
    18241 aagacctttc ataaaatatt taaagactta atatttgaga atattcaagt agaaagccca
    18301 tctttctatc gcagtaatta cgatactgaa aatgaaatga tggcagctat tttaacgaat
    18361 atagagcaaa ttctaattga aagaaatgat gaaatcgcag ggtttatatt ggaaccgttg
    18421 attcaaggtg cgacaggctt gtttgttcat cctaaaggct ttttgaaaga agtcgagaaa
    18481 ttgtgcaaaa aatacgatgt cttattaatt tgtgatgagg tagcagttgg ttttgggaga
    18541 actgggaaga tgtttgcatg taatcatgaa gatgttcaac cggatattat gtgtttaggt
    18601 aaggcgatta caggtggcta tttaccactt gcagcaacgt tgacgtctca aaaaatttac
    18661 gatgcgtttc taagtgattc gcacggtgtg aatacctttt tccatggtca tacatacacc
    18721 ggaaatcaaa tcgtttgtac ggttgcatta gaaaatataa gactttatga aaaacgtaag
    18781 ttattgtcac aaattgaaac gacatcatca acacttgaga aacagttaca tgcgctgaag
    18841 cgtcatagaa atgttggtga tgtaagagga cgaggcttaa tgtttggagt tgaattagtt
    18901 acagataaag atagtaaaac gccgttagaa attgaaaaag ttgaacgtat tgtacgtaat
    18961 tgtaaagaaa acgggctaat gattagaaat ttagaaaatg tcattacgtt tgtgccagtg
    19021 ttaagtatgt caaataaaga agtaaaaacg atggtacgta tttttaaaaa ggcagtacat
    19081 aacattttag ataggaagtg ttaatatgaa tttggctaaa cgcatattac aaggggaaca
    19141 attaacaaaa gagactgtat tgaaaattta tgaggatact aatattgata ccttagattt
    19201 attaaatgag gcgtatattt taagaaaaca ttatttcggt aaaaaagtaa aattaaatat
    19261 gattttaaat gctaaaagtg gtatatgtcc cgagaattgt gggtactgtg gacaatcacg
    19321 agatattaaa gaaaaacagc gatatgcttt aattccagag gaacaaatta tcgatggagc
    19381 aaaggtggca catgataatc atattggaac atattgtatt gttatgagtg gtagaggacc
    19441 gagcgataaa gaagttgatc atattagtaa cactgtaaga acgattaaat ctcaacaccc
    19501 gcaactaaaa atatgtgcat gtttaggatt aacgaatgac gaacaagcta agaaacttaa
    19561 gtcagctggt gtagacagat ataaccacaa tattaataca agtgaaaatt accatgataa
    19621 cgtcgtgaca acgcatagtt ataaagatag aacagatacg atagaactaa tgaaagcgaa
    19681 taatatctca ccatgttctg gcgtgatttg tggtatggga gaatctaatc aagatattgt
    19741 tgatatggca tttgctttga aagaaatgga tgccgacagt attccgatta attttttgca
    19801 tccaatcaaa ggcacaaagt ttggaagtat ggatgattta acaccaatga aatgtttaag
    19861 aatcgtagca ttattccgat taatcaatcc tacgaaagaa attcgtattg ctggaggaag
    19921 agaggtcaac ttacgttcgt tgcagccatt agcattaaaa gcggcgaatt caatatttgt
    19981 cggtgattat ctaattactg gtgggcaacc gaaccaatta gactacgata tgattaatga
    20041 tttgggcttt gaaattgatt atgacacttg tgaaaataag gaaaacaaga atgatgtttc
    20101 aagagcaaat tgatttatta caacagaaag ggttatatcg gtcgcttaaa tcggtagggt
    20161 atatagatag acagtatatt gaagtagaaa ataagcgatg tacgaattat acatctaatg
    20221 attatttagg attaggacaa atagcgtttg ataaggatga tttcgaaaga tttatgcgga
    20281 agtatagtta tcacttatca agttcaagat taattagtgg aagttcgaca gcttatgaag
    20341 aaattgaaac aatgttagca ggttggctcg gatatagtgc atgtactatc ttaaatagtg
    20401 gttatgatgc taatttggcg ttatttaata ttttcaaaaa tacaaattgt gtcgtgtttt
    20461 cagatcaaga aaatcatgcg agtattattg acggtattaa gttaagtggt ttagaaaaag
    20521 tgatatataa gcatttagat attgctgatt tagaaaaaag gttagcggaa tgccctaatc
    20581 aaaatataca aaaaataatc atatctgata gtgtattttc aacgaatggc gacgttgtgg
    20641 atattggtca attagtctca ttaaagcata aatataacgc aacactgata ctcgatgttt
    20701 cacatagttt tggaatagag aattactcga attatcaagg tgtagatata ctcacttcta
    20761 gtttatctaa agcatgtggt gcatacgggg gtgtgatttt aagttcaaat gatgtgaagg
    20821 atatgttaat taatcacggt agaccactca tctactcaag tagtttgcca atttataatt
    20881 tgtattttat aaaaagaaat attgaaaagt taataaatgc tgatgataga cgcactaaat
    20941 taaatagttt gagtaaatat tttaaccaaa agttaaaagc gctcaatgtt aattataata
    21001 gttcaaactc gccgattaag tttattgagt ttgatgacat agaagcggct gagaatattc
    21061 atcaaacatt attaaagcat catgtgttta caagttattt aaggtatcca actgtgacta
    21121 agccaatgtt aagaatatca ttgtcgtatt ttcatactga acaagatgta gataggttgt
    21181 ttgaaatttt gcatcaagaa gattgaggtg atcgtcatgt atagtataaa aatgcgttct
    21241 agcaatcaag atgttcatat tagtggtgct gaaacgattt gtgagtttga caaaatagaa
    21301 cagacggtac aaaggtttta taataaaggt ttttttcatg aaaatgggca accggatttt
    21361 ctcaatataa aaatacaaaa aattatggaa ccgattcaac aaataaaagc attacaaatt
    21421 attgaggatg ataaagcaaa tctccaacat ttaacacaag aatgtggtgt cactgaacaa
    21481 gcgctaaatc aagggatgac atatattaaa aatgaaacgg tttatacagg agctattatt
    21541 ctatctgcta tatctggtaa acgtttagat tcatttggac aaagggggat tagggcaacg
    21601 catttttcgt ttgaagatat aaataataaa ggtgatctta atgaaagagt gactgatgcc
    21661 ttagcaattg ctagttgtat caatgcgcat ccgtatatca aaggagaact ttgtgtgtcc
    21721 gatgacttaa cgtatacgac aggttatttt gcctctgcta aaattggtta tcatcgatta
    21781 tttgatatta aaccagttaa tacgagatat ggaggcagaa taatatttgt ggacgatcgt
    21841 attgatttaa atcattacat atcattttta gaaagcacac cgaagcaagt tgtttatgaa
    21901 acggtatagg agttttagta tgacatcaaa agatattact caaattagtg tcattgctgc
    21961 gattttaacc attttggcag ttttgaaaat accatccatt ataccgggat tagattttca
    22021 attatctgca ccggtagcat tattaatatt agctttcttt ggaattaaaa agtacttttt
    22081 aggtgggctt ttatcaagcg tattattgct gatatttggc gtatttaatc caattaatgt
    22141 gattatttct attatattta gagttatagc tattgcagtt gtttatttat tgaaaataaa
    22201 tgtactatca ttaattttag caagtgtatt aggcagtttg atatctaggc tactattatc
    22261 tattatttta aatttacctg tgtgggtagt gttattaaac gcgattccag gcgtaatatt
    22321 cactttaatt gtagctattc ctttatatct cacattgaga aaaagaatgg cagtcttact
    22381 aagataataa atcaaaacac ggtcgtcaca attactgttg gcgaccgtgt tttactagct
    22441 atttattgtt ttcagtttct tttgtatcta acaatttcac tttgtgattt tcccaatcaa
    22501 tttcatatgt tgatttaaat gttctagttt taaagttttt ataatttgcg cctgcccagt
    22561 agaagccatt ccaacgaatt tggtataaat ccatttcacg ttgataagtt actgtaattt
    22621 tagatttttt agcgccatct tgtctgtgtg atagtacgct taaaaattct ggattgaagt
    22681 tacttctaga taataatggc atttggtgtt gcgctatgaa gttttggcca gcgtatgcac
    22741 tgctttgtct gccagctaag aagagttcat taccgtatgt tgggtggaag ctatctcgtc
    22801 cataaggtcc ccaaccatta ttcataattt tatgtgcttc aactccccag ccaacatttt
    22861 tataatttgt gttgcgactt aatgttgttc tgtaactttc ttgtttataa ttaattgttt
    22921 cagaaaaagc tgtatttcca ttaagtccac cagataaacc attagagata ctaatgtcac
    22981 caccaaatgt atagcctaaa gtgttttgaa cttgaaactc ttcattttga ttttttggtg
    23041 cataatcaac gacgtttact gaatcattag attgtgagct tatagataca ttgtatttag
    23101 ctccccaata taattttgaa aagtcatagt cattaggatt aggtttcaca aagcctgagt
    23161 taatattccc agtagcttta agtactaaag tatccttatc ataactttta tctttgatga
    23221 aattaaatgt taaaatctgt gaaattttaa atttatcaga atctgctgtg gctgttgttt
    23281 tgtataaagt aactttgtca tcgacttttt ttacgctgac tggtgtgatt ttgccttcag
    23341 cattagcagt accagaaagt aataataatg ccatagatgt agcaacggat gatttgacta
    23401 atttattcat tttcatatca attctgtcct ttcaccttga tttcatgagt cttccaattg
    23461 acctcgtatt tcacagtgta gtttctattt acaaatgcat tatggattct atgaccatct
    23521 aaataactat tgccataatg tgttgatctt ttaatggcat gagtgacatc catgtttctt
    23581 ccgtaagtaa tttcgaattc gcttgtatcg cttgaacctt tttcatgaga tactgtggcg
    23641 ataaatgaag ggttaaatcc actttgtaca agaggtggca aatcactgtc tggaacgaaa
    23701 taatctctag gatctttact atgaggtttg tagcctacaa ataaatcgct atcaaatgct
    23761 gatttttgac ctgattcagt ggcgaatgaa ttcgctttga cgccccataa aacacttttt
    23821 gagttttgtt gttctacttc acttacataa ttttgttgtg tatagctaat cgatttagaa
    23881 tagttaaatg atccattacc accgagtgat ggggctgatt ggaaattacc accgatattg
    23941 tatcctaatg tctgactcac gtttgtagat tcaattttat ttttaggtaa ataattaatt
    24001 aaagaaacat atttatcatt tgttttcaaa ccaatattat attggaatgg ccatcgcata
    24061 gatttaatat gattagtgtt tttatagttg taatatgttg ttctagagct aatgaatcct
    24121 tgcatcttta atatcaaagc atctttgtta tattttttat ccttcacaaa atcaaattga
    24181 atattttgag tcacgcccca tttattactt gttttatctt ctgtcctttt gataatttct
    24241 atatcgcttc ctttaccgat gtcttcagta tcgttggcag ctttagcatt ttctaataac
    24301 ggattggcaa gaggggcaag taagctcaca gataaagttg tagctaatat tttattttta
    24361 agcataagtt tcgctttctt tc
//
LOCUS       DALMNS010000032        23784 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.032, whole genome shotgun sequence.
ACCESSION   DALMNS010000032 DALMNS010000000
VERSION     DALMNS010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 23784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23784
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.032"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            104..228
                     /locus_tag="O6Y56_001088"
                     /pseudo
     CDS             104..228
                     /locus_tag="O6Y56_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001817602.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            251..1603
                     /gene="glmU"
                     /locus_tag="O6Y56_001089"
     CDS             251..1603
                     /gene="glmU"
                     /locus_tag="O6Y56_001089"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDB5574363.1"
                     /translation="MRRHAIILAAGKGTRMKSKKYKVLHEVAGKPMVEHVLESVKGSG
                     VDQVVTIVGHGAESVKGHLGERSLYSFQEEQLGTAHAVQMAKSHLEDKEGTTIVVCGD
                     TPLITKETLETLIAHHEDANAQATVLSASIQQPYGYGRIVRNASGRLERIVEEKDATQ
                     AEKDINEISSGIFAFNNKTLFEKLTQVKNDNAQGEYYLPDVLSLILNDGGIVEVYRTN
                     DVEEIMGVNDRVMLSQAEKAMQRRTNHYHMLNGVTIIDPDSTFIGSDVTIGSDTVIEP
                     GVRINGRTKIGEDVVIGQYSEINNSTIENGACIQQSVVNDASVGANTKVGPFAQLRPG
                     AQLGSDVKVGNFVEIKKADLKDGAKVSHLSYIGDAVIGERTNIGCGTITVNYDGENKF
                     KTIVGKDSFVGCNVNLVAPVTIGDDVLVAAGSTITDDVPNDSLAVARARQTTKEGYRK
                     "
     gene            1750..2715
                     /locus_tag="O6Y56_001090"
     CDS             1750..2715
                     /locus_tag="O6Y56_001090"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HDB5574364.1"
                     /translation="MLNNEYKNSSLKIFSLKGNEALAQEVADQVGIELGKCSVKRFSD
                     GEIQINIEESIRGCDVFIIQPTSYPVNLHLMELLIMIDACKRASAATINIVVPYYGYA
                     RQDRKARSREPITAKLVANLIETAGATRMIALDLHAPQIQGFFDIPIDHLMGVPILAK
                     HFKDDPNINPEECVVVSPDHGGVTRARKLADILKTPIAIIDKRRPRPNVAEVMNIVGE
                     IEGRTAIIIDDIIDTAGTITLAAQALKDKGAKEVYACCTHPVLSGPAKERIENSAIKE
                     LIVTNSIHLDEDRKPSNTKELSVAGLIAQAIIRVYERESVSVLFD"
     gene            2865..3518
                     /locus_tag="O6Y56_001091"
     CDS             2865..3518
                     /locus_tag="O6Y56_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HDB5574365.1"
                     /translation="MASLKSIIRQGKQTRSDLKQLRKSGKVPAVVYGYGTKNVSVKVD
                     EVEFIKVIREVGRNGVIELGVGSKTIKVMVADYQFDPLKNQITHIDFLAINMSEERTV
                     EVPVQLVGEAVGAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVK
                     VTGDFKIENDSAESVVTVVAPTEEPTEEEIEAMEGEQQTEEPEVVGESKEDEEKTEE"
     gene            3829..4401
                     /locus_tag="O6Y56_001092"
     CDS             3829..4401
                     /locus_tag="O6Y56_001092"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDB5574366.1"
                     /translation="MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSLDKQKFKG
                     AYTIERMNGDKVLFIEPMTMMNLSGEAVAPIMDYYDVNPEDLIVLYDDLDLEQGQVRL
                     RQKGSAGGHNGMKSIIKMLGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEK
                     VIEHAARAIEKFVETSRFDHVMNEFNGEVK"
     gene            4401..7907
                     /gene="mfd"
                     /locus_tag="O6Y56_001093"
     CDS             4401..7907
                     /gene="mfd"
                     /locus_tag="O6Y56_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000154248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HDB5574367.1"
                     /translation="MTILTTLIKEGNLFQDLNQVFGQANTLVTGLSPSAKVTMIAEKY
                     AQSNQQLLLITNNLYQADKLETDLLQFVDAEELYKYPVQDIMTEEFSTQSPQLMSERI
                     RTLTALAQGKKGLFIVPLNGLKKWLTPVEMWQNHQMTLRVGEDIDVDQFLNKLVNMGY
                     KRESVVSHIGEFSLRGGIIDIFPLIGEPIRIELFDTEIDSIRDFDVETQRSKDNIEEV
                     DITTASDYIITEEVIRHLKEELKTAYENTRPKIDKSVRNDLKETYESFKLFESTYFDH
                     QILRRLVAFMYETPSTIIDYFQKDAIIAVDEFNRIKETEESLTVESDSFISNIIESGN
                     GFIGQSFIKYDDFETLIEGYPVTYFSLFATTMPIKLNHIIKFSCKPVQQFYGQYDIMR
                     SEFQRFVNQNYHIVVLVETETKVERMQAMLSEMHIPSITKLHRSMSSGQAVIIEGSLS
                     EGFELPDMGLVVITERELFKSKQKKQRKRTKAISNAEKIKSYQDLNVGDYIVHVHHGV
                     GRYLGVETLEVGQTHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKTPKLNKLGGS
                     EWKKTKAKVQQSVEDIAEELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQA
                     KSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQ
                     HYETLIERMQDFPVEIQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKD
                     LGLLIVDEEQRFGVRHKERIKTLKHNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPP
                     ENRFPVQTYVLEQNMSFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPDANI
                     AVAHGQMTERDLEETMLSFINNEYDILVTTTIIETGVDVPNANTLIIEDADRFGLSQL
                     YQLRGRVGRSSRIGYAYFLHPANKVLTETAEDRLQAIKEFTELGSGFKIAMRDLNIRG
                     AGNLLGKQQHGFIDTVGFDLYSQMLEEAVNEKRGIKEPESEVPEVEVDLNLDAYLPTE
                     YIANEQAKIEIYKKLRKTETFDQIIDIKDELIDRFNDYPVEVARLLDIVEIKVHALHS
                     GITLIKDKGKIIDIHLSVKATENIDGEVLFKATQPLGRTMKVGVQNNAMTITLTKQNQ
                     WLDSLKFLVKCIEESMRISDET"
     gene            7897..9423
                     /locus_tag="O6Y56_001094"
     CDS             7897..9423
                     /locus_tag="O6Y56_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HDB5574368.1"
                     /translation="MKHKEAFNGVVVLTAALIVIKILSAVYRIPYQNILGDTGLYAYQ
                     QVYPIVALGMILSMNAIPSAITQNIGKYHSDEAYAKAVAYIQLVGILLFIAIFVFANN
                     IAYMMGDSHLTPMIQAASLSFIFIGMLGVLRGYYQSANNMTVPAISQVIEQVIRVGII
                     IVTIVIFVDRGWTIYEAGTIAILASTIGFLGSSIYLVAHRPFKFKMVNNTAKIVWKQF
                     ALSVLIFAISQLIVILWQVIDSVTIIKSLQAIRVPFDVAITEKGVYDRGASFIQMGLI
                     VTTTFSFALIPLLSDAIKMNNQVLMNRYANASLKITILISTAAGIGLINLLPLMNGVF
                     FKTNDLTLTLSVYMITVICVSLIMMDMALLQAQHAVRPIFVGMTAGLVIKFILNIILI
                     RLSSIIGASISTVVSLIIFGTIIHIAVTRKYHLHAMRRFFINVVLGMVFMSIVVQCVL
                     NIVTTHGRITGLIELLCVAVLGIIALFFYIFRFNVLTYKELTYLPFGSKLYQIKKGRR
                     "
     gene            9423..10616
                     /locus_tag="O6Y56_001095"
     CDS             9423..10616
                     /locus_tag="O6Y56_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HDB5574369.1"
                     /translation="MAHTITIVGLGNYGIDDLPLGIYKFLKTQDKVYARTLDHPVIES
                     LQDELTFQSFDHVYEAHDQFEDVYNDIVAQLVEAANEKDIVYAVPGHPRVAETTTVKL
                     LALAKDNTDIDVKVLGGKSFIDDVFEAVNVDPNDGFTLLDATSLQEVTLNVRTHTLIT
                     QVYSAMVAANLKITLMERYPDDYPVQIVTGARSDGADNVVTCPLYELDHDENAFNNLT
                     SVFVPKITTPTYLYHDFDFATEVIDTLVDEDKGCPWDKVQTHETLKRYLLEETFELFE
                     AIDNEDDWHMIEELGDILLQVLLHTSIGKKEGYIDIKEVITSLNAKMIRRHPHIFGDA
                     NAETIDDLKEIWSKAKDAEGKQPRVKFEKVFAEHFLNLYEKTKDKSFDEAALKQWLEK
                     GESNT"
     gene            10613..10876
                     /locus_tag="O6Y56_001096"
     CDS             10613..10876
                     /locus_tag="O6Y56_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HDB5574370.1"
                     /translation="MRLDKYLKVSRLIKRRTLAKEVSDQGRITINGNVAKAGSDVKVE
                     DVLTIRFGQKLVTVKVTALNEHASKDNAKGMYEIIEERRLEEA"
     gene            10894..11286
                     /locus_tag="O6Y56_001097"
     CDS             10894..11286
                     /locus_tag="O6Y56_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HDB5574371.1"
                     /translation="MKNKVEHIENQYTSQENKKKQRQKMKMRVVRRRITVFAGVLLAI
                     IVVLSILLVVQKHRNDIDAQERKAKEAQFQKQQNEEIALKEKLNNLNDKDYIEKIARD
                     DYYLSNKGEVIFRLPEDKDSSSSKSSKK"
     gene            11391..11792
                     /locus_tag="O6Y56_001098"
     CDS             11391..11792
                     /locus_tag="O6Y56_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein S1"
                     /protein_id="HDB5574372.1"
                     /translation="MSIEVGNKLKGKVTGIKKFGAFVELPEGKSGLVHISEVADNYVE
                     NVEEHLSVGDEVDVKVLSIADDGKISLSIKKAKDRPRRQHTSKPSHQKPVQKAEDFEK
                     KLSNFLKDSEDKLTSIKRQTESRRGGKGSRR"
     gene            11972..13267
                     /gene="tilS"
                     /locus_tag="O6Y56_001099"
     CDS             11972..13267
                     /gene="tilS"
                     /locus_tag="O6Y56_001099"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDB5574373.1"
                     /translation="MQLNSNGWHVDDHIVVAVSTGIDSMCLLYQLLNDYKDSYRKLTC
                     LHVNHGVRSASIEEARFLEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWF
                     DEMMNVLEADVLLTAHHLDDQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLA
                     VSKKEIKQFQERYHIPYFEDESNKDNKYVRNDIRNRIIPAIDENNQLKVSHLLKLKQW
                     HDEQYDILQYSAKQFIQEFVKFDEQSKYLEVSRQAFNNLPNSLKMVVLDCLLSKYYEL
                     FNISAKTYEEWFKQFSSKKAQFSINLTDKWIIQIAYGKLIIMAKNNGDTYFRVQTIEK
                     PGNYIFNKYRLEIHSNLPKCLFPLTVRTRQSGDAFKLNGRDGYKKVNRLFIDCKVQQW
                     VRDQMPIILDKQQRIIAVGDLYQQQTIKQWILISKNGDE"
     gene            13272..13811
                     /gene="hpt"
                     /locus_tag="O6Y56_001100"
     CDS             13272..13811
                     /gene="hpt"
                     /locus_tag="O6Y56_001100"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HDB5574374.1"
                     /translation="MHNDLKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILKGS
                     AMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILE
                     TGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYR
                     ELYRNLPYIGTLKPEVYSN"
     gene            14069..16162
                     /gene="ftsH"
                     /locus_tag="O6Y56_001101"
     CDS             14069..16162
                     /gene="ftsH"
                     /locus_tag="O6Y56_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDB5574375.1"
                     /translation="MQKAFRNVLVIVIIGVIIFGLFSYLNGNGNMPKQLTYNQFTEKL
                     EKGDLKTLEIQPQQNVYMVSGKTKNDEDYSSTILYNNEKELQKITDAAKKQNGVKLTI
                     KEEEKQSVFVSILSTLIPVVVIALLFIFFLSQAQGGGSGGRMMNFGKSKAKMYDNNKR
                     RVRFSDVAGADEEKQELIEIVDFLKDNKKFKEMGSRIPKGVLLVGPPGTGKTLLARAV
                     AGEAGAPFFSISGSDFVEMFVGVGASRVRDLFDNAKKNAPCIIFIDEIDAVGRQRGAG
                     VGGGHDEREQTLNQLLVEMDGFGENEGIIMIAATNRPDILDPALLRPGRFDRQIQVGR
                     PDVKGREAILHVHAKNKPLDETVDLKAISQRTPGFSGADLENLLNEASLIAVREGKKK
                     IDMRDIEEATDRVIAGPAKKSRVISKKERNIVAHHEAGHTIIGMVLDEAEVVHKVTIV
                     PRGQAGGYAMMLPKQDRFLMTEQELLDKICGLLGGRVSEDINFNEVSTGASNDFERAT
                     QIARSMVTQYGMSKKLGPLQFGHSNGQVFLGKDMQGEPNYSSQIAYEIDKEVQRIVKE
                     QYERCKQILLEHKEQLILIAETLLTEETLVAEQIQSLFYEGKLPEIDYDAAKVVKDED
                     SEFNDGKFGKSYEEIRKEQLEDGQRDESEDRKEEKDIAEDKKEADKSDEKDEPAHRQA
                     PNIEKPYDPNHPDNK"
     gene            16405..17286
                     /gene="hslO"
                     /locus_tag="O6Y56_001102"
     CDS             16405..17286
                     /gene="hslO"
                     /locus_tag="O6Y56_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HDB5574376.1"
                     /translation="MTHDYIVKALAFDGEIRAYAALTTETVQEAQTRHYTWPTASAAM
                     GRTMTATAMMGAMLKGDQKLTVTVDGQGPIGRIIADANAKGEVRAYVDHPQTHFPLNE
                     QGKLDVRRAVGTNGSIMVVKDVGMKDYFSGASPIVSGELGEDFTYYYATSEQTPSSVG
                     LGVLVNPDNTIKAAGGFIIQVMPGAKDETISKLEKAISEMTPVSKLIEQGLTPEGLLN
                     EILGEDHVQILEKMPVQFECNCSHEKFLNAIKGLGEAEIQNMIKEDHGAEAVCHFCGN
                     KYKYTEEELNVLLESLA"
     gene            17465..18397
                     /gene="cysK"
                     /locus_tag="O6Y56_001103"
     CDS             17465..18397
                     /gene="cysK"
                     /locus_tag="O6Y56_001103"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HDB5574377.1"
                     /translation="MAQKPVDNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGS
                     VKDRIALAMIEKAEREGKIKPGDTIVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQ
                     ERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEEHGYFEPQQFENPANPEVHELTTG
                     PELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEIVAIEPEASPVLSGGEPG
                     PHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAA
                     IQKAKELGKGKTVVTVLPSNGERYLSTPLYSFDD"
     gene            18613..19416
                     /gene="folP"
                     /locus_tag="O6Y56_001104"
     CDS             18613..19416
                     /gene="folP"
                     /locus_tag="O6Y56_001104"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HDB5574378.1"
                     /translation="MTKTKIMGILNVTPDSFSDGGKFNNVESAVTRVKAMMDEGADII
                     DVGGVSTRPGHEMVSLEEELNRVLPVVEAIVGFDVKISVDTFRSEVAEACLKLGVDII
                     NDQWAGLYDHHMFQVVANYDAEIVLMHNGNGEREEPVVEEMLTSLLAQAHQAKMSGVS
                     VDKIWLDPGIGFAKTREEEAEVMARLDELVATGYPVLLATSRKRFTKEMMGYDTTPVE
                     RDEVTAATTAYGIMKGVKAVRVHNVALNAKLAKGIDFLKENENARHNLS"
     gene            19394..19759
                     /gene="folB"
                     /locus_tag="O6Y56_001105"
     CDS             19394..19759
                     /gene="folB"
                     /locus_tag="O6Y56_001105"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDB5574379.1"
                     /translation="MQDTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLAEAGR
                     TDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKEN
                     PPIPGHYDGVGIEIVRENK"
     gene            19756..20232
                     /gene="folK"
                     /locus_tag="O6Y56_001106"
     CDS             19756..20232
                     /gene="folK"
                     /locus_tag="O6Y56_001106"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDB5574380.1"
                     /translation="MIQAYLGLGSNIGDRESQLNDAIKILNEYDGINVSNISPIYETA
                     PVGYTEQPNFLNLCVEIQTTLTVLQLLECCLKTEECLHRVRKERWGPRTLDVDILLYG
                     EEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVIEPRSKLKVKDLVFVDDSVKRYK"
     gene            20625..20717
                     /locus_tag="O6Y56_001107"
     CDS             20625..20717
                     /locus_tag="O6Y56_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574381.1"
                     /translation="MVNDKVLETSKEMYVEQKCLIFYKTLKENV"
     gene            20770..22257
                     /gene="lysS"
                     /locus_tag="O6Y56_001108"
     CDS             20770..22257
                     /gene="lysS"
                     /locus_tag="O6Y56_001108"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDB5574382.1"
                     /translation="MSEEMNDQMLVRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEW
                     DQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDNEF
                     DLWKNADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYR
                     QRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTH
                     HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAY
                     ADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLHIVDAVKEATGVDFY
                     EVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKVEETLIQPTFIYGHPTEISPLA
                     KKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDE
                     DYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQK"
     gene            22815..22929
                     /gene="rrf"
                     /locus_tag="O6Y56_001109"
     rRNA            22815..22929
                     /gene="rrf"
                     /locus_tag="O6Y56_001109"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            22942..23017
                     /locus_tag="O6Y56_001110"
     tRNA            22942..23017
                     /locus_tag="O6Y56_001110"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22975..22977,aa:Val,seq:tac)
     gene            23034..23109
                     /locus_tag="O6Y56_001111"
     tRNA            23034..23109
                     /locus_tag="O6Y56_001111"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23067..23069,aa:Thr,seq:tgt)
     gene            23116..23188
                     /locus_tag="O6Y56_001112"
     tRNA            23116..23188
                     /locus_tag="O6Y56_001112"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23149..23151,aa:Lys,seq:ttt)
     gene            23222..23296
                     /locus_tag="O6Y56_001113"
     tRNA            23222..23296
                     /locus_tag="O6Y56_001113"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23254..23256,aa:Gly,seq:gcc)
     gene            23304..23392
                     /locus_tag="O6Y56_001114"
     tRNA            23304..23392
                     /locus_tag="O6Y56_001114"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23338..23340,aa:Leu,seq:taa)
     gene            23398..23474
                     /locus_tag="O6Y56_001115"
     tRNA            23398..23474
                     /locus_tag="O6Y56_001115"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23432..23434,aa:Arg,seq:acg)
     gene            23495..23568
                     /locus_tag="O6Y56_001116"
     tRNA            23495..23568
                     /locus_tag="O6Y56_001116"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23529..23531,aa:Pro,seq:tgg)
     gene            23592..23667
                     /locus_tag="O6Y56_001117"
     tRNA            23592..23667
                     /locus_tag="O6Y56_001117"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23625..23627,aa:Ala,seq:tgc)
BASE COUNT         8420 a         3273 c         4888 g         7203 t
ORIGIN      
        1 tttgtattaa tgttttttta tgaaatgaaa ggctaataaa tatatacgtt aacagattat
       61 gatgatatga agattattga tttattgctg ataaaaatta cgtttgaatg atgctcgtat
      121 ttttgaagta agaaaaagtt gtttttaaaa ttacaacgaa ttaaaaacaa tgccttttat
      181 atgttgaaag agtattgcag attaaattat aataatgacg aagtgtaaaa tttaatgggg
      241 gttaatgttc atgcgaagac acgcgataat tttggcagca ggtaaaggca caagaatgaa
      301 atctaaaaag tataaagtgc tacacgaggt tgctgggaaa cctatggtcg aacatgtatt
      361 ggaaagtgtg aaaggctctg gtgtcgatca agttgtaacc atcgtaggac atggtgctga
      421 aagtgtaaaa ggacatttag gcgagcgttc tttatacagt tttcaagagg aacaactcgg
      481 tactgcgcat gcagtgcaaa tggcgaaatc acacttagaa gacaaggaag gtacgacgat
      541 cgttgtatgt ggtgatacac cgctcatcac aaaggaaaca ttagaaacat tgattgcgca
      601 tcacgaggat gctaatgctc aagcaactgt attatctgca tcgattcaac aaccatatgg
      661 atacggaaga atcgttcgaa atgcgtcagg tcgtttagaa cgcatagttg aagagaaaga
      721 tgcaacgcaa gctgaaaagg atattaatga aattagttca ggtatttttg cgtttaataa
      781 taaaacgttg tttgaaaaat taacacaagt gaaaaatgat aatgcgcaag gtgaatatta
      841 cctccctgat gtattgtcgt taattttaaa tgatggcggc atcgtagaag tctatcgtac
      901 caatgatgtt gaagaaatca tgggtgtaaa tgatcgtgta atgcttagtc aggctgagaa
      961 ggcgatgcaa cgtcgtacga atcattatca catgttaaat ggtgtgacaa tcatcgatcc
     1021 tgacagcact tttattggtt cagacgttac aattggtagt gatacagtca ttgaaccagg
     1081 cgtacgaatt aacggtcgta caaaaattgg tgaagatgtt gttattggtc agtactctga
     1141 aattaacaat agtacgattg aaaatggtgc atgtattcaa cagtctgttg ttaatgatgc
     1201 tagcgtagga gcgaatacta aggtcggacc gtttgcgcaa ttgagaccag gcgcgcaatt
     1261 aggttcagat gttaaggttg gaaattttgt agaaattaaa aaagcagatc ttaaagatgg
     1321 tgccaaggtt tcacatttaa gttatattgg cgatgctgta attggcgaac gtactaatat
     1381 tggttgcgga acgattacag ttaactatga tggtgaaaat aaatttaaaa ctatcgtcgg
     1441 caaagattca tttgtaggtt gcaatgttaa tttagtagca cctgtaacaa ttggtgatga
     1501 tgtattggtg gcagctggtt ccacaatcac agatgacgta ccaaatgaca gtttagctgt
     1561 ggcaagagca agacaaacaa caaaagaagg atataggaaa taatcattta cgtatttaaa
     1621 atggctagga taaaaggata atcctatgta atattaatgt aatctttatg atttaatgat
     1681 tcgcatagta atggagttac attttatata taatagtaat tgcgtaagta aataattgga
     1741 ggactataaa tgttaaataa tgaatataag aattcgtcat taaagatttt ttcattgaaa
     1801 ggaaacgaag cattagcgca agaagttgct gaccaagtag gaattgaact aggtaaatgt
     1861 tcagttaaac gttttagtga tggagaaatt caaattaata tcgaagagag tattcgtggt
     1921 tgtgacgtat ttattattca accaacatca tatcctgtaa atctacattt aatggaatta
     1981 ttaattatga ttgatgcttg taaacgtgct tctgcagcaa caatcaatat tgtagtgcca
     2041 tattatggat atgcaagaca agatagaaaa gcccgtagcc gtgagccaat cactgctaaa
     2101 ttagttgcaa acttaatcga aacagctggc gcaactcgta tgattgcgtt agacttacat
     2161 gcaccacaaa ttcaaggatt ctttgatatt ccaattgacc acttaatggg tgtgccaatt
     2221 cttgctaaac atttcaaaga tgatccgaat attaacccag aagaatgtgt cgttgtttca
     2281 ccagaccatg gcggtgttac acgtgcacgt aaattagctg acattttaaa aactccaatt
     2341 gcaattatag ataaacgtcg ccctagacca aatgttgctg aagtgatgaa cattgttggt
     2401 gagattgaag gacgtacggc aattattatt gacgatatta ttgatacagc aggtacaatc
     2461 actttagctg cacaagcatt aaaagataaa ggtgctaaag aagtatatgc ttgttgtaca
     2521 caccctgttt tatcaggacc ggctaaagaa cgtatcgaaa attctgctat aaaagaatta
     2581 atcgtaacaa actcaattca tttagatgaa gatcgcaaac catctaacac taaagaatta
     2641 tctgttgctg gtttaatcgc acaagctatc attcgtgtat acgaaagaga atcagttagc
     2701 gtattatttg actaatattt aaaaggtgtt tgacgaacat attccaaacg tgtataatag
     2761 tttcgttcgt gattatacga ataaataaac acttgcaagc aacgattatg ttgatgggta
     2821 agtgaggtgc tcgttttgag caaaaatgaa aggtggaaat gagaatggct tcattaaagt
     2881 caatcatccg tcaaggtaaa caaacacgtt cagatcttaa acaattaaga aaatctggta
     2941 aagtaccagc agtagtatac ggttacggta ctaaaaacgt gtcagttaaa gttgatgaag
     3001 tagaattcat caaagttatc cgtgaagtag gtcgtaacgg tgttatcgaa ttaggcgttg
     3061 gttctaaaac tatcaaagtt atggttgcag actaccaatt cgatccactt aaaaaccaaa
     3121 ttactcacat tgacttctta gcaatcaata tgagtgaaga acgtactgtt gaagtaccag
     3181 ttcaattagt tggtgaagca gtaggcgcta aagaaggcgg cgtagttgaa caaccattat
     3241 tcaacttaga agtaactgct actccagaca atattccaga agcaatcgaa gtagacatta
     3301 ctgaattaaa cattaacgac agcttaactg ttgctgatgt taaagtaact ggcgacttca
     3361 aaatcgaaaa cgattcagct gaatcagtag taacagtagt tgctccaact gaagaaccaa
     3421 ctgaagaaga aatcgaagct atggaaggcg aacaacaaac tgaagaacca gaagttgttg
     3481 gcgaaagcaa agaagacgaa gaaaaaactg aagagtaagt ttaactgatt accataaagt
     3541 ttttatactt tgttaaacaa gcactgtgct tattttaata taagcatggt gctttttgtg
     3601 ttattataaa gtttaattaa actttattgc tttgtactaa agttaaatta attttagtga
     3661 gtaaaagaca ttaaactcaa caatgataca tcataaaaat tttaatgtac ttgattttaa
     3721 aatacatact tactaagcta aagaataatg ataattgatg gcaatagcgg aaaatagatg
     3781 ttgtcattat aataataaat gaaataatta tgttggaggt aaacacgcat gaaatgtatt
     3841 gtaggtctag gtaatatagg taaacgtttt gaacttacaa gacataatat cggctttgaa
     3901 gtcgttgatt atattttaga gaaaaataat ttttcattag ataaacaaaa gtttaaaggt
     3961 gcatatacaa ttgaacgaat gaacggagat aaagtgttat ttatcgaacc aatgacaatg
     4021 atgaatttgt caggtgaagc agttgcaccg attatggatt attacgatgt taatccagaa
     4081 gatttaattg tcttatatga tgatttagat ttagaacaag gacaagttcg cttaagacaa
     4141 aaaggaagtg cgggcggtca caatggtatg aaatcaatta ttaaaatgct tggtacagac
     4201 caatttaaac gtattcgtat tggtgtggga agaccaacga atggtatgac ggtacctgat
     4261 tatgttttac aacgcttttc aaatgatgaa atggtaacga tggaaaaagt tatcgaacac
     4321 gcagcacgcg caattgaaaa gtttgttgaa acatcacgat ttgaccatgt tatgaatgaa
     4381 tttaatggtg aagtgaaata atgacaatat tgacaacgct tataaaagaa ggtaatcttt
     4441 ttcaagacct taatcaggta tttggacaag caaacacact agtaactggt ctttccccgt
     4501 cagctaaagt gacgatgatt gctgaaaaat atgcacaaag taatcaacag ttattattaa
     4561 ttaccaataa tttataccaa gcagataaat tagaaacaga tttacttcaa tttgtagatg
     4621 ctgaagaatt gtataagtat cctgtgcaag atattatgac cgaagagttt tcaacacaaa
     4681 gccctcaact gatgagtgaa cgtattagaa ctttaactgc gttagctcaa ggtaagaaag
     4741 ggttatttat cgttccttta aatggtttga aaaagtggtt aactcctgtt gaaatgtggc
     4801 aaaatcacca aatgacattg cgtgttggtg aggatatcga tgtggaccaa tttcttaaca
     4861 aattagttaa tatggggtac aagcgggaat ccgtggtatc gcatattggt gaattctcat
     4921 tgcgaggagg tattatcgac atctttccgc taattgggga accaatcaga attgagctat
     4981 ttgataccga aattgattct attcgggatt ttgatgttga aacgcagcga tccaaagata
     5041 atattgaaga agtcgatata acaactgcaa gtgattatat cattactgaa gaagtgatta
     5101 gacatcttaa agaagagtta aaaactgcat atgaaaatac aagacccaaa atagataaat
     5161 cagtgcgcaa tgatctgaaa gaaacgtatg aaagctttaa attattcgaa agtacatact
     5221 ttgatcatca aatactacgt cgtttagtag cgtttatgta tgaaacacct tcgacaatta
     5281 ttgattattt ccaaaaagat gcaatcattg cggttgatga atttaatcgt attaaagaaa
     5341 ctgaagaaag tttaacagta gagtctgatt cgtttattag caatattatt gaaagtggta
     5401 atggatttat aggacaaagt tttataaaat atgatgattt tgaaacattg attgaaggct
     5461 atccagtcac ttatttttca ttattcgcta caacaatgcc gataaaacta aatcatatta
     5521 ttaaattttc atgtaaacct gtccaacagt tttatgggca atatgacatt atgcgttctg
     5581 aatttcaacg atttgttaac caaaattatc atatcgtggt tttggtcgaa accgaaacta
     5641 aagttgaacg tatgcaagcg atgttaagtg aaatgcatat tccatcaata acaaaattgc
     5701 atcgctcaat gtcatcgggg caagcagtga ttattgaagg cagtttatct gaaggatttg
     5761 aactacctga tatgggatta gttgtcatta ctgaacgtga gctttttaaa tcaaaacaga
     5821 aaaagcaacg aaaacgtacg aaagctatct caaatgctga aaaaattaag tcttaccaag
     5881 atttaaatgt gggagattat attgttcatg tgcatcatgg tgttggtaga tatttaggtg
     5941 ttgagacgct cgaagtaggg caaacacatc gtgattatat taaattgcaa tataaaggta
     6001 cggatcaact atttgttcca gtagatcaaa tggatcaagt tcaaaaatat gtagcttcgg
     6061 aagataagac gccaaaatta aataaactcg gtggcagtga atggaaaaaa acaaaagcta
     6121 aagttcaaca aagtgttgaa gatattgctg aagagttgat tgatttatat aaagaaagag
     6181 aaatggcaga aggttatcaa tatggggaag acacagctga gcaaacaaca tttgaattag
     6241 attttccata tgaacttacg cctgaccaag cgaaatctat cgatgaaatt aaagatgaca
     6301 tgcaaaaatc gcgtccaatg gatcgcttgc tatgtggtga tgttggttat ggtaaaaccg
     6361 aagttgcagt gagagcagca ttcaaagctg taatggaagg caagcaggtt gcatttttag
     6421 ttcctacaac tattttagct cagcaacatt atgagacgtt aattgagcgt atgcaggatt
     6481 ttcctgttga aattcaatta atgagtcgtt ttagaacgcc taaagagata aaacaaacta
     6541 aggaagggct taaaactggg tttgttgaca tagttgttgg tacacacaaa ttacttagta
     6601 aagatataca gtataaagat ttagggctgt tgattgtaga tgaagaacaa cgatttggtg
     6661 tacgccataa agagcgtatt aaaacattaa aacataatgt agatgtacta actttgactg
     6721 caaccccaat acctagaaca ttgcatatga gtatgctagg tgtgcgcgat ttgtcagtga
     6781 ttgaaacgcc gccagaaaat cgtttcccag ttcaaacata tgtattagaa cagaacatga
     6841 gttttatcaa agaagcttta gaaagagaac tatctcgtga tggccaagta ttttatcttt
     6901 ataataaagt gcaatccatt tatgaaaaac gagaacaact ccagatgtta atgccagatg
     6961 ctaatattgc agttgctcat ggacaaatga cagagcgaga tttagaagaa acgatgttaa
     7021 gttttatcaa taatgaatat gatattttag taacgacgac gattattgaa acaggtgtcg
     7081 atgtcccaaa tgcaaatact ttgatcattg aagatgcaga tcgctttgga ttgagtcagt
     7141 tgtatcaatt aagaggtcgt gttggtcgtt caagtcgtat tggttatgca tacttcttac
     7201 atccagcaaa taaggtacta actgagactg cagaagatcg attacaagcg attaaagaat
     7261 ttacggagtt aggctcagga tttaagattg cgatgcgtga tttgaacatt cgtggtgctg
     7321 gtaatttgtt aggtaaacaa cagcacggct ttattgatac agttggattt gatttgtaca
     7381 gtcaaatgtt agaagaagct gtaaatgaaa aacgtggtat taaggaacca gaatctgagg
     7441 tgccagaagt cgaagttgat ttaaacttgg atgcatattt gccaacagaa tatattgcaa
     7501 atgaacaagc taaaattgaa atctataaaa agctacgaaa aactgaaaca tttgatcaaa
     7561 ttatcgacat taaagatgaa ttaattgatc gtttcaatga ttatcctgtt gaagtagcac
     7621 gtttgcttga tatagtggaa ataaaagtac acgcattaca ttcaggtatc acgttgatta
     7681 aagataaagg gaaaataatt gatattcatt tatctgtaaa agccactgaa aatattgatg
     7741 gcgaagtgct tttcaaagca acacaacctt taggtagaac aatgaaggtt ggtgttcaaa
     7801 ataatgcaat gacaattact ttaacaaaac aaaatcaatg gcttgatagt ttgaagttct
     7861 tagttaagtg cattgaagaa agtatgagaa tcagtgatga aacataaaga agcatttaat
     7921 ggcgttgtcg tgttaactgc tgcattaatt gtcattaaaa ttctgagtgc tgtatatcga
     7981 attccatatc aaaatatatt aggcgataca ggtttgtatg catatcaaca agtgtatcca
     8041 attgtagcat taggaatgat attatcgatg aatgccattc ctagtgcaat tacacaaaat
     8101 atagggaagt atcatagtga cgaagcatat gcaaaagcag tcgcttatat acaattagtt
     8161 ggtatattat tatttattgc tatttttgtg tttgcgaaca atattgcata tatgatgggt
     8221 gatagccatt taacacctat gattcaagct gcaagtttaa gctttatatt tataggtatg
     8281 cttggcgtgt taagaggtta ttatcaatct gcaaataata tgacagttcc ggctatttcc
     8341 caggttatag aacaagttat acgagtaggt attatcattg ttactattgt tatttttgta
     8401 gatagaggtt ggacgatata tgaagcggga acaattgcta ttttagcatc aacgataggt
     8461 tttttaggtt cttcaattta tttagtagcg caccgacctt ttaagtttaa aatggtaaat
     8521 aacactgcaa agatcgtttg gaaacagttc gcactttcgg ttttgatttt cgctatcagt
     8581 caattaatcg taattttatg gcaagtgatt gatagtgtta ctattattaa gtcacttcaa
     8641 gcgatacgcg tgccattcga tgttgccata actgaaaaag gagtctatga ccgtggtgca
     8701 tcatttattc agatgggatt gattgtaact acaacattta gttttgcgct cattcctctg
     8761 ttaagtgacg caatcaaaat gaataatcag gtacttatga atcgttatgc aaatgcgtca
     8821 ttaaagatta cgattttaat aagtacagca gcgggaatag gattaattaa tttattgcct
     8881 ttaatgaacg gtgtattttt taagacgaat gatttaacct taacattaag cgtttatatg
     8941 attacggtca tttgtgtatc gttaattatg atggatatgg cattattaca agctcaacat
     9001 gctgtgagac ctatttttgt tggtatgacg gcaggattgg ttattaaatt tatacttaat
     9061 atcattttga ttcggttaag tagcattatt ggtgcgagca ttagtactgt tgtatcatta
     9121 attatattcg gtacgattat ccatattgct gtcacgagaa aataccactt acatgcgatg
     9181 agacgatttt ttatcaatgt tgttttaggt atggtattta tgtcgattgt tgttcaatgc
     9241 gtgttaaaca tagtgacaac acacggtaga atcactggac tcattgaatt attatgtgta
     9301 gcagtattag gtatcattgc attgtttttc tatattttta gatttaatgt tttgacatat
     9361 aaagagttaa cttatttacc atttggttca aagttgtatc aaattaagaa aggaagacgt
     9421 tgatggcaca taccattacg attgttggct taggaaacta tggcattgat gatttgccgc
     9481 tagggatata taaattttta aagacacaag ataaagttta tgcaagaacg ttagatcatc
     9541 cagttataga atcattgcaa gatgaattaa catttcagag ttttgaccat gtttatgaag
     9601 cacatgacca atttgaagat gtctataatg atattgtggc gcaattggtt gaagctgcta
     9661 atgaaaaaga tattgtctat gcggttccgg gtcatcctag agttgctgag acaactacag
     9721 tgaaattact ggctttagca aaagacaata ctgatataga tgtgaaagtt ttaggtggga
     9781 aaagctttat tgatgatgtt tttgaagcag ttaatgtaga tccaaatgat ggcttcacac
     9841 tgttagatgc gacatcatta caagaagtaa cacttaatgt tagaacgcat acattgatta
     9901 cgcaagttta tagtgcaatg gttgctgcta atttgaaaat cactttaatg gaacgatatc
     9961 ctgatgatta ccctgttcaa attgtcactg gtgcacgaag cgatggtgcg gataacgttg
    10021 tgacatgccc attatatgaa ttggatcatg atgaaaatgc attcaataat ttgacgagtg
    10081 tattcgtacc aaaaatcaca acaccgacat atttgtatca tgactttgat tttgcaacgg
    10141 aagtgattga tactttagtt gatgaagata agggttgtcc atgggataaa gtgcaaacgc
    10201 atgaaacgct taaacgttat ttacttgaag aaacatttga attgttcgaa gctattgaca
    10261 atgaagatga ttggcatatg attgaagaac taggagatat tttattacaa gtgttattgc
    10321 atactagtat tggtaaaaaa gaagggtata tcgacattaa agaagtgatt acaagtctta
    10381 atgctaaaat gattcgtaga cacccacaca tatttggtga tgccaatgct gaaactatcg
    10441 atgacttaaa agaaatttgg tctaaggcga aagatgctga aggtaaacag ccaagagtta
    10501 aatttgaaaa agtatttgca gagcattttt taaatttata tgagaagacg aaggataagt
    10561 catttgatga ggccgcgtta aagcagtggc tagaaaaagg ggagagtaat acatgagatt
    10621 agataaatat ttaaaagtat cacggttaat aaagcgacgt acgctagcaa aagaagtaag
    10681 tgatcaaggt agaattacaa taaatggtaa tgttgctaaa gctggatcgg atgttaaagt
    10741 tgaagatgtg ctgacgattc gctttggtca aaaattagta acagttaaag taactgcatt
    10801 aaatgaacat gcatctaaag ataacgcgaa gggcatgtat gaaatcattg aagagcgtcg
    10861 acttgaagaa gcgtaaattg gaggtgacaa gcaatgaaaa ataaagtaga acatatagaa
    10921 aatcagtaca cgtcgcaaga gaacaagaaa aaacaacgtc aaaaaatgaa aatgcgtgtt
    10981 gttcgtaggc gtattacagt atttgcgggc gtattacttg cgataattgt tgttttatca
    11041 atcttgcttg ttgtccaaaa acatcgcaat gatattgatg cacaggagcg aaaagcgaaa
    11101 gaagcacagt ttcaaaagca acaaaatgaa gaaattgcgt taaaagaaaa gttgaataat
    11161 ctgaatgaca aagattatat tgaaaaaatt gcgcgtgatg attattactt aagcaacaaa
    11221 ggtgaagtga tttttaggtt gccagaagac aaagattcgt ctagctcaaa atcttcgaaa
    11281 aaataaatcc aaattgattc aaaattatcc gagtatagac attgtgaaaa aatccaaaca
    11341 aggatataat aagggaaaat cgaatcaaat cgggaggatt tatttaacat atgtcaatcg
    11401 aagttggaaa taagcttaaa ggtaaagtca ctggtattaa aaagtttggt gcattcgtag
    11461 aattacctga aggaaaaagt ggtttagttc acattagtga agtcgcagat aattatgttg
    11521 aaaacgtaga agagcacctt tctgttggtg atgaagtaga cgtaaaagta ttatctattg
    11581 ctgatgatgg aaaaattagt ctttcaatta agaaagctaa agaccgtcca cgtagacaac
    11641 atacgagtaa accaagtcat caaaaaccag tgcaaaaagc cgaagatttt gaaaagaaat
    11701 taagcaattt cttaaaagat agtgaagata aattaacttc aatcaaacgt caaacagaat
    11761 ctagacgcgg tggcaaaggt tctagacgtt aattaaaata aataaagact gtttcgataa
    11821 ggaatatatt tagaatgatg cgtatcgaat aatcgattgc agcgttagac aatctaagac
    11881 tgtttcttaa ataaggagca gtctctttta tttgtaatga tataactaag acttatacca
    11941 tttttgaaaa ttgtaaaagt gaggtgatgt tatgcagtta aatagtaatg gttggcatgt
    12001 tgatgaccat attgttgtcg ctgtttctac aggtattgat agtatgtgtt tattgtatca
    12061 actactaaat gattataaag atagttacag aaaactaaca tgtttacatg tcaatcatgg
    12121 cgtcaggtca gcttcaatcg aggaagccag atttttagaa gcatactgcg aacgtcatca
    12181 catcgattta catatcaaaa agttggattt gtcgcatagt ctcgaccgaa ataacagcat
    12241 tcagaatgaa gctcgaatta aacgttacga atggtttgat gaaatgatga atgtattaga
    12301 agcggatgta ttgctaacgg cgcatcattt ggacgatcaa ttagaaacta ttatgtatcg
    12361 catttttaat gggaaatcaa cgcgtaataa actaggattt gatgagttat cgaagcgaaa
    12421 aggttatcag atttatcgac cacttctagc tgtctctaaa aaagaaataa aacaattcca
    12481 agagagatat catataccat attttgaaga tgaatctaat aaagataaca aatatgttag
    12541 aaatgatatt cgtaatagaa ttattccagc tattgatgaa aataatcaac ttaaagtatc
    12601 gcatttatta aaattaaaac aatggcatga tgaacaatat gatattttgc aatattcagc
    12661 taaacaattt attcaagaat ttgtgaagtt tgatgaacag tcaaaatatt tagaggtttc
    12721 tagacaagct tttaataact tgccaaactc attaaagatg gttgtgttgg attgcctatt
    12781 atcaaagtat tatgagttgt ttaatattag tgctaaaaca tacgaagagt ggtttaaaca
    12841 atttagtagt aagaaagcac aattcagtat taatctcacg gataaatgga taattcaaat
    12901 cgcatatggt aaattaataa taatggctaa aaataatggc gatacatatt ttagagttca
    12961 aactattgaa aagccaggta attatatttt taacaaatat cgattagaga tacattctaa
    13021 tttaccaaaa tgtttatttc cgcttacagt gagaacacga caaagtggcg atgcatttaa
    13081 actaaatggg cgcgatggtt ataagaaagt gaatcgcctg tttatagatt gtaaagtgca
    13141 acagtgggtt cgggatcaaa tgccaatcat attggataaa caacagcgca ttattgcggt
    13201 aggagattta tatcaacaac aaacaataaa acaatggatt ttaattagta aaaatggaga
    13261 tgaatagcgt tatgcataat gatttgaaag aagtattgtt aactgaagaa gatattcaaa
    13321 atatctgtaa ggaattggga gcacaattaa caaaggatta tcaaggtaaa ccattagtat
    13381 gcgtgggtat cttaaaaggc tcagcaatgt ttatgtcaga tttaattaaa cgaattgata
    13441 cccatttatc aattgatttc atggatgttt ctagttatca cggaggcact gagtcaactg
    13501 gtgaagttca aatcattaaa gatttaggtt cttctattga aaataaagac gtattaatta
    13561 ttgaagatat cttagagact ggtactacac ttaagtcaat tactgaatta ttacaatcta
    13621 gaaaagttaa ttcattagaa atagttactt tattagataa accaaaccgt cgtaaagcgg
    13681 acattgaagc taagtatgta ggtaaaaaaa taccagatga atttgttgtt ggttacggtt
    13741 tagattatcg tgaattatac cgaaacttac catatatcgg cacgttaaaa cccgaagtgt
    13801 attcaaatta attttttaat cgatttcagt tattattact atgcgtttga gaaataatag
    13861 tgtagactca aaaatatgaa aaatgtattt catatatatt taattttagg caagacatat
    13921 gtcttaaaaa gttgaaaaat atagagattg ataaaactaa cacagggtgt gaatgacatt
    13981 gatgttaagc tcaattacta gcttataaaa catgtcatat gttacaattt ttgttagttt
    14041 tattatggga agtaggagga aatgacgcat gcagaaagct tttcgcaatg tgctagttat
    14101 cgtaataata ggcgttatta tttttggtct attttcatat ttaaacggta atggaaatat
    14161 gccgaaacag cttacatata atcaatttac tgagaagttg gaaaaaggtg accttaaaac
    14221 tttagaaatc caaccacaac aaaatgtcta tatggtaagt ggtaaaacga aaaatgatga
    14281 agactattca tcaactattt tatataacaa cgaaaaagaa ttacaaaaaa ttactgatgc
    14341 tgctaaaaag caaaacggtg taaaattaac gattaaagaa gaagaaaaac aaagtgtctt
    14401 tgtgagtata ctttcaacat taattccagt tgtagtcata gcgttattat ttattttctt
    14461 cctaagccaa gcacaaggtg gcggtagtgg cggtcgtatg atgaactttg gtaaatctaa
    14521 agcaaaaatg tacgataata ataaacgtcg tgttcgtttc tctgatgtag caggggcaga
    14581 tgaagaaaaa caagaattaa ttgaaattgt tgatttcttg aaagataata aaaaattcaa
    14641 agaaatggga tctaggattc ctaaaggtgt cttacttgtt ggacctccag gtactggtaa
    14701 aacattactt gctagagcgg ttgcaggtga agcaggcgca ccattcttct ctattagtgg
    14761 ttcagacttt gtagagatgt ttgttggtgt tggtgcgagc cgtgttcgtg acttattcga
    14821 taatgctaag aaaaacgcgc cttgtatcat ctttatcgat gagattgatg ctgttggtcg
    14881 tcaacgtggt gcaggtgttg gtggcggtca tgatgaacgt gaacaaaccc taaaccaatt
    14941 attagttgaa atggatggat tcggtgaaaa tgaaggtatc attatgatag ctgctacaaa
    15001 ccgtcctgat atccttgacc cagccttatt acgtccaggt cgttttgata gacaaattca
    15061 agttggtcgt ccagatgtga aaggccgtga agcaattctt catgttcatg ctaaaaataa
    15121 accacttgat gaaacggttg atttaaaagc aatttcacaa cgtacacctg gtttctcagg
    15181 tgctgattta gagaacttat taaatgaagc atctttaatt gctgtacgtg aaggtaaaaa
    15241 gaaaattgac atgagagata tcgaagaggc aacggataga gttatagccg gacctgctaa
    15301 gaaatctcga gttatttcta agaaagaacg taatattgtt gctcatcacg aagctggtca
    15361 tacaattatc ggtatggtac ttgatgaggc agaagtagtg cataaagtta ctattgttcc
    15421 acgtggacaa gcaggtggtt atgcaatgat gctacctaaa caagatcgtt tcttaatgac
    15481 tgaacaagag ttattagata aaatctgtgg tttacttggt ggacgtgtat cagaagatat
    15541 taactttaac gaagtatcaa caggtgcttc aaatgacttc gaacgtgcaa cacaaatcgc
    15601 acgctcaatg gttacacaat atggtatgag taaaaaatta ggaccattac agttcggtca
    15661 tagcaatggt caagtattct taggtaaaga tatgcaaggt gagcctaatt attcaagcca
    15721 aatcgcatat gaaattgata aagaagttca acgaatcgtt aaagaacaat acgaacgttg
    15781 taaacaaatt ttattagagc acaaagaaca gttaatttta attgctgaaa cattattaac
    15841 agaagaaaca ttagttgctg aacaaattca atcattattc tacgaaggta aattacctga
    15901 aattgattat gatgcagcta aagttgttaa agatgaagat tctgaattta atgatggtaa
    15961 attcggtaaa tcttatgaag agattcgtaa agagcaatta gaagatggac aacgtgacga
    16021 aagtgaagat cgtaaagaag aaaaagatat tgctgaggat aaaaaagaag ctgataaatc
    16081 tgatgaaaaa gatgaaccag cacatcgaca agccccaaat atcgaaaaac cttacgatcc
    16141 aaatcaccca gacaataaat aatcgattat attcagtacc tctttctatg ataaagttat
    16201 agaaagaggt actttttagc attttaaata attagaaagt tgtttatcag ttttatagta
    16261 agcgataaaa tcgttgtacg atgaattaac tatcaaacaa gttgcttcat tatttagaat
    16321 gatgggtgta gaataagtac aattgttgca ttttatgaag taaagtaatt tttaaaatat
    16381 agagtaatag aggagattga aataatgaca cacgattata ttgttaaagc attagcattt
    16441 gatggggaga ttagggctta tgctgctttg acaactgaaa ctgttcaaga agcacaaacg
    16501 agacattata catggccgac agcatctgct gcaatgggaa gaacaatgac agcaacagct
    16561 atgatgggcg caatgttgaa aggtgatcaa aaattaactg tcactgtaga tggccaagga
    16621 cctattggac gaattattgc cgatgcaaat gctaaaggcg aggtgcgtgc ttatgtagac
    16681 catccacaaa ctcattttcc attaaatgag caaggtaaac ttgatgtaag acgagcagta
    16741 gggacaaatg gatctattat ggttgttaaa gatgttggaa tgaaagacta tttctctgga
    16801 gcaagtccaa ttgtttcagg agaacttggt gaagatttta cttattatta tgctacaagt
    16861 gaacaaacac cttcatcggt aggtcttggt gtattggtaa atcctgataa tacgattaaa
    16921 gcagcaggag gatttatcat tcaagttatg ccaggtgcca aagatgaaac aatttcaaaa
    16981 ttagaaaaag caattagtga aatgacacca gtttctaaat taattgaaca aggattaacg
    17041 ccagaaggat tactaaacga aatcttaggt gaagaccatg tgcaaatttt agagaaaatg
    17101 cctgttcaat ttgaatgtaa ttgtagtcat gagaaatttt taaatgctat taaaggattg
    17161 ggcgaggctg agattcaaaa tatgattaaa gaagatcatg gtgctgaagc agtatgtcat
    17221 ttctgtggaa ataaatataa atatactgaa gaagaattaa acgtgttgct agaaagttta
    17281 gcgtaattta atttaaatca atacgctaaa atgtttattt ttagcggttt agtgaaatgt
    17341 agaactaaat agttgtataa tccttagtga ttttgtttgc tttctagaat ttatttgata
    17401 aaataattct atatccgata aataaactaa gatttcaaca actaactaaa aaggagtgtt
    17461 cttaatggca caaaaaccag tagataatat tactcaaatt attggcggta caccggtagt
    17521 caaattgaga aatgtagtag atgacaatgc agcagatgtt tatgtaaaat tggaatatca
    17581 aaatccaggt ggttctgtaa aagatagaat tgctttagca atgattgaaa aagcagagcg
    17641 agaaggcaaa attaaacctg gcgatacaat tgtagaacca acaagtggta atacaggtat
    17701 cggtttagca tttgtatgtg ctgctaaagg atataaagca gtatttacta tgcccgaaac
    17761 aatgagccaa gagcgtcgta atttattaaa agcatacggt gcggaattag ttttaacgcc
    17821 tggatcagaa gcgatgaaag gtgcaattaa aaaagctaaa gaattaaaag aagaacatgg
    17881 ttacttcgag ccacaacaat ttgaaaaccc tgcgaaccct gaagttcatg agttaactac
    17941 aggtcctgag ttattacaac aatttgaagg gaaaactatc gatgcgttcc tagctggtgt
    18001 tggtactggt ggtacgttat ctggtgtagg taaagttctg aaaaaagaat atcctaacat
    18061 cgaaattgtt gctatagagc ctgaggcttc tccagtattg agcggtggtg agccaggtcc
    18121 acataaatta caaggtttag gtgctggatt tattccaggt actttgaata cagaaatcta
    18181 tgacagtatt attaaagtag gaaatgatac agcgatggaa atgtctcgtc gagttgctaa
    18241 agaggaaggt attttagcag gtatttcatc aggtgctgcg atttatgctg ccattcaaaa
    18301 agcaaaagaa ttaggaaaag gtaaaacagt agtaacagta ttgccaagta atggtgagcg
    18361 ctacttatca acacctttat attcattcga tgactaatta atgtcattta aaagagtgag
    18421 ttatcttttt gagataactt gctctttttt tctaccatgt ataattttaa aaatatgagc
    18481 gttaaattaa acatttttct gataaaaaca tccagtgaat gataagataa taaacgtaca
    18541 tactaataac tagtaaatcg cagaagtaaa ttttattaga gttaaacaat acatgattaa
    18601 aggatggtta acatgactaa aacaaaaatt atgggcatat taaacgtcac acctgattca
    18661 ttctcagatg gtggaaaatt taataatgtt gaatcagcag taactagagt gaaagcgatg
    18721 atggatgaag gtgctgacat tatagatgtt ggaggtgttt caacgagacc cggccatgaa
    18781 atggtttcat tagaagaaga gctgaacaga gtattacctg ttgttgaggc tattgtcggt
    18841 tttgatgtga aaatttcagt cgatacattt cgaagtgagg ttgctgaagc ttgtttaaag
    18901 ctaggtgttg atattattaa tgatcaatgg gcggggctgt atgatcatca tatgttccaa
    18961 gttgtagcca actacgatgc ggaaattgtt ttaatgcata atggcaatgg cgaacgtgag
    19021 gaaccagttg ttgaagaaat gttgacatct ttacttgcac aagcccatca agctaaaatg
    19081 tcaggtgttt cagtagataa aatttggcta gatccgggaa ttggttttgc caagacaaga
    19141 gaagaggaag ctgaagtaat ggcaaggctg gatgaacttg tggccacagg gtatccagtt
    19201 ttattagcga caagccggaa acgtttcact aaagagatga tgggttatga tacaacaccg
    19261 gttgaaaggg atgaagtgac tgctgcaacg acagcgtatg gtattatgaa gggtgttaaa
    19321 gcagtacgcg tacataatgt tgcgttaaat gctaaattag ctaaaggtat agatttttta
    19381 aaggagaatg aaaatgcaag acacaatctt tcttaaaggt atgcgctttt atggatatca
    19441 tggtgcttta tcggctgaaa atgaaatagg gcaaattttt aaagtggatg taactttgaa
    19501 agtagactta gctgaagctg gtcgtactga taatgttatt gatacagttc attatggtga
    19561 agtgttcgaa gaggttaaat caattatgga aggtaaggcc gttaatttac ttgagcatct
    19621 agctgaacgt attgcaaatc gtataaattc acaatataat cgtgtaatgg aaacgaaagt
    19681 gagaatcact aaagaaaacc caccgattcc gggtcattat gatggagtag gtatcgaaat
    19741 agtgagggag aataaatgat tcaagcatac ttaggattag gtagtaatat tggtgataga
    19801 gaaagccagt taaacgatgc tataaagatt ttgaatgaat atgatggtat taacgtatct
    19861 aatatttctc cgatttatga aacagcacca gttgggtata ctgagcaacc taacttttta
    19921 aatttgtgtg ttgaaattca aacaacactc acagtattac aactgttgga atgttgtttg
    19981 aagacagaag aatgtttaca ccgtgttaga aaggaacgat ggggtcctag aactttagat
    20041 gtggatatct tgttgtatgg agaagaaatg atagatttac caaaactgtc ggtgccacat
    20101 ccgagaatga atgaacgtgc atttgtttta atcccattaa atgatatagc agcaaatgtc
    20161 atagaaccac gttcgaaatt gaaagtgaaa gatttagttt ttgtcgatga cagtgtaaag
    20221 agatataaat aatgtattgt tgagaacatt catatttatt gggaatagat gattgattat
    20281 tggagatgtt tccgcatttt gattatctct aaatgcattt gatttcgaat tagtatatga
    20341 tgatttagta tgtgttagaa ttaagttatt tcataaaatc aaagtaagca atatttgata
    20401 aattgctgta atttatttgg gcttttgttg aagtttgtgg aagaaaattt tatacattta
    20461 ctcagggttg tattaatgat aatcgtattt taaatgaata agtaattcat aaacgaaaac
    20521 agaaatagct ttattacatt tacaacctct tgtaaaatta aaaaagtgat aaaattgatg
    20581 ttatgaatat aagaaaacat gctacatcat aactttaagg tgtaatggtt aatgataaag
    20641 tattagaaac atcgaaagag atgtatgttg agcaaaaatg tctgatattt tataaaactt
    20701 taaaggaaaa tgtttgagtg taccagttgg aatactaaag gattacaaca agttaaagga
    20761 gagaaagtta tgtcagaaga aatgaatgac caaatgttgg ttcgacgtca aaaattacaa
    20821 gaattatatg atcttggtat agacccgttt ggttctaaat ttgaccgttc aggtttatct
    20881 agtgatttga aagaagagtg ggaccagtat tctaaagaag aattggtaga aaaagaagcg
    20941 gatagtcatg tcgctatagc tggacgatta atgactaagc gtggtaaagg taaagcagga
    21001 tttgcacacg ttcaggactt agctggacaa attcaaattt acgttcgtaa agatcaagtt
    21061 ggtgataacg aatttgattt atggaaaaat gctgatttag gcgatatcgt tggtgttgaa
    21121 ggtgtaatgt tcaaaacaaa tactggcgaa ttatcggtta aagcgaagaa attcacgcta
    21181 ctaactaaat cattgcgacc attaccggat aaattccacg gtttacagga tattgaacag
    21241 agatatcgtc aaagatattt agatttaatt acgaacgaag atagcactcg tacatttatt
    21301 aatcgtagta aaatcattca agaaatgcgt aattatttaa ataataaagg tttcttggaa
    21361 gtagaaacac ctatgatgca ccaaattgct ggtggcgcag ctgctagacc atttgtaaca
    21421 catcataatg cattagatgc aacgttatac atgcgtattg ctattgagtt gcatttgaaa
    21481 cgtttaattg tcggtggact tgaaaaagta tatgaaattg gtagagtatt ccgtaatgaa
    21541 ggtgtatcaa ctagacataa ccctgaattc acaatgattg aattatatga agcatatgca
    21601 gattatcatg acattatgga tttaacagaa tctatggtga gacatattgc caatgaagta
    21661 ttaggttctg caaaagtaca atataatggg gaaacgattg atttagaatc tgcatggact
    21721 cgtttgcata ttgttgatgc tgtaaaagaa gctactggtg tagattttta tgaagttaaa
    21781 agtgatgaag aagctaaagc tttagctaaa gaacatggta ttgaaattaa agatacaatg
    21841 aaatatggtc atattttaaa tgaattcttt gagcaaaaag ttgaagaaac acttattcag
    21901 ccaacgttta tctatggtca tccgactgaa atttcacctt tagcgaagaa aaatcctgaa
    21961 gatcctagat ttactgatcg tttcgaattg ttcattgtag gtagagagca tgcaaatgca
    22021 tttactgaat taaatgatcc tattgatcaa aaaggtcgtt ttgaagcgca acttgttgaa
    22081 aaagcgcaag gtaatgatga agcgcatgaa atggatgaag attacattga agcgttagaa
    22141 tatggtatgc ctccgacagg tggtcttggt atcggtattg acagattagt tatgttatta
    22201 actgactctc catcaatcag agacgtatta ttattccctt atatgagaca aaaataaatg
    22261 acgttgattg ttagtaagag ctctcgtgta tacaacatgt gtatgcgagg gttttcttaa
    22321 ttatggtaat tagttcgtgt ttgaatgttt ttgatagtaa tagttaacga taatggtgct
    22381 atttttgact gttaaacaag gtagttagct gatagatgaa aatgacgata cgtatataga
    22441 gtagttctga tgagaaatgt taatgataga cattgagata tcttataaca aaaattgcta
    22501 tattagtata atttatctta atcagctata aaagtacttt aaaattgtat agaatgtgta
    22561 tggttttgta catatgtgta tgatagaata ctaaaagtgt tgtgaattag agagcacgag
    22621 aaatgtcagt tttgaagaat aaaaaagttg attaaaagtg ttgactttat caattgaatg
    22681 aagtaatata taaaagtcgt caaaaacaga cgaaacacac taaaagctgg tgtgacaaag
    22741 ttcacaacaa agtgtaaaat taactattgc accttattaa ttaagtgtgt atcataaata
    22801 agtaagttat tttgtctggt gactatagca aggaggtcac acctgttccc atgccgaaca
    22861 cagaagttaa gctccttagc gtcgatggta gtcgaactta cgttccgcta gagtagaacg
    22921 ttgccaggca aatgacaaat cggagaatta gctcagctgg gagagcatct gccttacaag
    22981 cagagggtcg gcggttcgaa cccgtcattc tccaccattt attcttacat atagccggcc
    23041 tagctcaatt ggtagagcaa ctgacttgta atcagtaggt tgggggttca agtcctctgg
    23101 ccggcaccat cttttgagcc attagctcag ctggtagagc atctgacttt taatcagagg
    23161 gtcagaggtt cgaatcctct atggctcatt acgatttaat ttttatattt agcaaaataa
    23221 tgcagaagta gttcagcggt agaatacaac cttgccaagg ttggggtcgc gggttcgaat
    23281 cccgtcttct gctccattat tttgccgggg tggcggaact ggcagacgca caggacttaa
    23341 aatcctgcgg tgagagatca ccgtaccggt tcgattccgg tcctcggcac cattttagcg
    23401 cccgtagctc aattggatag agcgtttgac tacggatcaa gaggttatgg gttcgactcc
    23461 tatcgggcgc gccattttta aattaattga ataacgggaa gtagctcagc ttggtagagc
    23521 acttggtttg ggaccaaggg gtcgcaggtt cgaatcctgt cttcccgatt acttcttaaa
    23581 ttccatttta tgggggctta gctcagctgg gagagcgcct gctttgcacg caggaggtca
    23641 gcggttcgat cccgctagtc tccaccattt atttttacac gatgaacatt gaaaactgaa
    23701 tgacaatatg tcaacgttaa ttccaaaaac gtaactatta gttacaaaca ttatttagta
    23761 tttatgagct aatcaaacat cata
//
LOCUS       DALMNS010000033        23582 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.033, whole genome shotgun sequence.
ACCESSION   DALMNS010000033 DALMNS010000000
VERSION     DALMNS010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 23582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23582
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.033"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..477)
                     /locus_tag="O6Y56_001118"
     CDS             complement(<1..477)
                     /locus_tag="O6Y56_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000882177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDB5574383.1"
                     /translation="MLCETENINKNPKYKIIKYKDEYLMIDLVSTWLALFFPMINWLI
                     PKKYVKISEKDFETLNIVKPTKINSFWPVAGSTVLFGVMLRRYSHLFIVKYEYSIVIL
                     ICCIIILGIFLFFLYLNQKLKLQIYNENKNKSNKIIIFPTLKSLCLSIVLYIYLGGG"
     gene            complement(481..1878)
                     /locus_tag="O6Y56_001119"
     CDS             complement(481..1878)
                     /locus_tag="O6Y56_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDB5574384.1"
                     /translation="MSIDMYLDRSRNQASSVGNLSQTMNSNYDALEKAITQFINDDAL
                     KGKAYTSAKQFFSTVLIPLSTSMKTLSDLTKQACDNFVSRYTSEVDSISLKESELEED
                     IRSLSQQITRYENLNNNLKKHASDNQQAISSNQQIIRTLGQQKHELEEKLRKLREFNQ
                     KSPEIFKEVEEFQKIVQQGLTQAQNFWNFSTNQFNIPSGKELDWAKASHEKYLKVAMG
                     KIEQKAEKETLNKADFAVIKAYAKEHPEDDIPKSIMKYINDNKDSIKRDIGLDITSTL
                     LEQGGINASKFGVFINTAGGVKGPAGPNSFVEVKRTSGNVFIENGSKFAKGGKYLGKG
                     VAGVGFGIGMYDDLANDDKTFGEALSHNALTTGIGTGAGIAITAALATNPVGWTVLAG
                     FAVGTLFTFITDWAYQNNIAGIKDKADWVGHKIDDGIDVAKKSTEKAIDSVGNVVGQA
                     TKSISDHINPMKWSW"
     gene            complement(2344..2445)
                     /locus_tag="O6Y56_001120"
     CDS             complement(2344..2445)
                     /locus_tag="O6Y56_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574385.1"
                     /translation="MCQYLCLKSVELGVFIVMSYYLKVVALTVRLHN"
     gene            2503..2943
                     /locus_tag="O6Y56_001121"
     CDS             2503..2943
                     /locus_tag="O6Y56_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006189740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HDB5574386.1"
                     /translation="MNLEFNIAVHVLAFLTKHHSEKFNSSSLAELTCLNPVQLRRVTT
                     QLVDLKMIDTIRGKDGGYLANARSADVSLATLYKHFVLEKEHHTRLFTGDEGSHCQIA
                     RNIATTMSHYQQDEQNIIINFYKEKTIKDVIEDIQKEDLCHENI"
     gene            2930..4252
                     /locus_tag="O6Y56_001122"
     CDS             2930..4252
                     /locus_tag="O6Y56_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-containing oxidoreductase"
                     /protein_id="HDB5574387.1"
                     /translation="MKTYDLIVIGFGKAGKTLAKYAASTGQHVAVIEQSSKMYGGTCI
                     NIGCIPSKTLVHDGLEGKSFEASYNRKNDVVNALNNKNYHLLADDNNIDVLDFKAQFK
                     SNTEVNLLDQHGDIVDSITAPHIIINTGATSVIPNIKGLDQAKHVFDSTGLLNINYQP
                     KHLVIVGGGYIALEFASMFANLGSKVTVLERGESFMPREDQDVVAHAITDLENKGIAL
                     YTNVETTELSSDDHHTTVHTNVGNFEADAVLLAIGRKPNTDLALENTDIELGDKGEIK
                     VNAHLQTTVPHIYAAGDVKGGLQFTYISLDDYRIIKSALYGNQSRTTDNRGSVPYTVF
                     IDPPLSRVGLTSKEAAVQHYDYTEHQLLVSAIPRHKINNDPRGLFKVVINNENNMILG
                     ATLYGKQSEELINIIKIAIDQNIPYTVLRDNIYTHPTMAESFNDLFNF"
     gene            complement(4304..4645)
                     /locus_tag="O6Y56_001123"
     CDS             complement(4304..4645)
                     /locus_tag="O6Y56_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1450 domain-containing protein"
                     /protein_id="HDB5574388.1"
                     /translation="MKNTFLICDECQAVNIRTLQKKLEKLDPDAEIVIGCQSYCGPGR
                     RKTFTFVNNRPLAALTEEELIEKVSQQLKKPRDPEEEERLRKRHEERKRRKEEQDRKL
                     KEKLEKRKAQQ"
     gene            complement(4822..5898)
                     /locus_tag="O6Y56_001124"
     CDS             complement(4822..5898)
                     /locus_tag="O6Y56_001124"
                     /EC_number="2.7.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomevalonate kinase"
                     /protein_id="HDB5574389.1"
                     /translation="MIQVKAPGKLYIAGEYAVTEPGYKSVLIALDRFVTATIEEADQY
                     KGTIHSKALHHNPVTFSRDEDSIVISDPHAAKQLNYVVTAIEIFEQYAKSCDIAMKHF
                     HLTIDSNLDDSNGHKYGLGSSAAVLVSVIKVLNEFYDMKLSNLYIYKLAVIANMKLQS
                     LSSCGDIAVSVYSGWLAYSTFDHEWVKHQIEDTTVEEVLIKNWPGLHIEPLQAPENME
                     VLIGWTGSPASSPHFVSEVKRLKSDPSFYGDFLEDSHRCVEKLIHAFKTNNIKGVQKM
                     VRQNRTIIQRMDKEATVDIETEKLKYLCDIAEKYHGASKTSGAGGGDCGITIINKDVD
                     KEKIYDEWTKHGIKPLKFNIYHGQ"
     gene            complement(5911..6894)
                     /gene="mvaD"
                     /locus_tag="O6Y56_001125"
     CDS             complement(5911..6894)
                     /gene="mvaD"
                     /locus_tag="O6Y56_001125"
                     /EC_number="4.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diphosphomevalonate decarboxylase"
                     /protein_id="HDB5574390.1"
                     /translation="MIKSGKARAHTNIALIKYWGKKDEALIIPMNNSISVTLEKFYTE
                     TKVTFNDQLTQDQFWLNGEKVSGKELEKISKYMDIVRNRAGIDWYAEIESDNFVPTAA
                     GLASSASAYAALAAACNQALDLQLSDKDLSRLARIGSGSASRSIYGGFAEWEKGYSDE
                     TSYAVPLESNHFEDDLAMIFVVINQHSKKVPSRYGMSLTRNTSRFYQYWLDHIDEDLA
                     EAKAAIQDKDFKRLGEVIEENGLRMHATNLGSTPPFTYLVQESYDVMALVHECREAGY
                     PCYFTMDAGPNVKILVEKKNKQQIIDKLLTQFDNNQIIDSDIIATGIEIIE"
     gene            complement(6899..7819)
                     /gene="mvk"
                     /locus_tag="O6Y56_001126"
     CDS             complement(6899..7819)
                     /gene="mvk"
                     /locus_tag="O6Y56_001126"
                     /EC_number="2.7.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mevalonate kinase"
                     /protein_id="HDB5574391.1"
                     /translation="MTRKGYGESTGKIILIGEHAVTFGEPAIAVPFNAGKIKVLIEAL
                     ESGNYSSIKSDVYDGMLYDAPDHLKSLVNRFVELNNITEPLAVTIQTNLPPSRGLGSS
                     AAVAVAFVRASYDFLGKSLTKEELIEKANWAEQIAHGKPSGIDTQTIVSGKPVWFQKG
                     HAETLKTLSLDGYMVVIDTGVKGSTRQAVEDVHKLCEDPQYMSHVKHIGKLVLRASDV
                     IEHHNFEALADIFNECHADLKALTVSHDKIEQLMKIGKENGAIAGKLTGAGRGGSMLL
                     LAKDLPTAKNIVKAVEKAGAAHTWIENLGG"
     gene            complement(8406..9242)
                     /locus_tag="O6Y56_001127"
     CDS             complement(8406..9242)
                     /locus_tag="O6Y56_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014532577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase family protein"
                     /protein_id="HDB5574392.1"
                     /translation="MDLASKYFNGVNWRYIDHSSGLEPMQSFAFDDTFCESVGKDISD
                     NVVRTWIHQHTVILGIHDSRLPFLKDGIDYLTNEIGYNAIVRNSGGLGVVLDQGVLNI
                     SLMFKGQTETTIDEAFTVMYLLISKMFEDENVDIDTMEIEHSYCPGKFDLSIDGKKFA
                     GISQRRVRGGIAVQIYLCVEGSGSERALMMQTFYEHALKGEVTKFKYPEIEPSCMASL
                     ETLLNKTITVQDVMFLLLYAIKDLGGVLNMTPITQEEWQRYDTYFDKMIERNKKMIDQ
                     MQ"
     gene            complement(9245..10231)
                     /gene="pta"
                     /locus_tag="O6Y56_001128"
     CDS             complement(9245..10231)
                     /gene="pta"
                     /locus_tag="O6Y56_001128"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDB5574393.1"
                     /translation="MADLLNVLKDKLSGKNVKIVLPEGEDERVLTAATQLQATDYVTP
                     IVLGDETKVQSLAQKLNLDISNIELINPATSELKAELVQSFVERRKGKATEEQAQELL
                     NNVNYFGTMLVYAGKADGLVSGAAHSTGDTVRPALQTIKTKPGVSRTSGIFFMIKGDE
                     QYIFGDCAINPELDSQGLAEIAVESAKSALSFGMDPKVAMLSFSTKGSAKSDDVTKVQ
                     EAVKLAQQKAEEEKLEAIIDGEFQFDAAIVPGVAEKKAPGAKLQGDANVFVFPSLEAG
                     NIGYKIAQRLGGYDAVGPVLQGLNSPVNDLSRGCSIEDVYNLSIITAAQALQ"
     gene            10399..11151
                     /locus_tag="O6Y56_001129"
     CDS             10399..11151
                     /locus_tag="O6Y56_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-dependent peroxidase"
                     /protein_id="HDB5574394.1"
                     /translation="MSQAAETLDGWYSLHLFYAVDWASLRLVPKDERDALVTEFQSFL
                     ENTATVRSSKSGDQAIYNITGQKADLLLWFLRPEMKSLNHIENEFNKLRIADFLIPTY
                     SYVSVIELSNYLAGKSDEDPYENPHIKARLYPELPHSDYICFYPMNKRRNETYNWYML
                     TMEERQKLMYDHGMIGRKYAGKIKQFITGSVGFDDFEWGVTLFSDDVLQFKKIVYEMR
                     FDETTARYGEFGSFFVGHIINTNEFDQFFAIS"
     gene            11699..12463
                     /locus_tag="O6Y56_001130"
     CDS             11699..12463
                     /locus_tag="O6Y56_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000354082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HDB5574395.1"
                     /translation="MDINSEEYKQEVLIKDVVMLAARILLESGAEGTRVEDTMTRIAK
                     KLGYSESNSFVTNTVIQFTLHSESFPRIFRITSRDTNLIKISQANKISRQITNNEISL
                     AEAKTQLEKIYVAKRDSSFPFKGFAAAMIAMSFLYLQGGRLIDVLTAILAGSLGYLVT
                     EILDRKLHAQFIPEFIGSLVIGIIAVIGHTLIPTGDLATIIIAAVMPIVPGVLITNAI
                     QDLFGGHMLMFTTKSLEALVTAFGIGAGVGSVLILV"
     gene            12476..12928
                     /locus_tag="O6Y56_001131"
     CDS             12476..12928
                     /locus_tag="O6Y56_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HDB5574396.1"
                     /translation="MFWILNFIFSFLASMFFCVIFDAPRKLYLSCGFVGTCGWMVYTL
                     FFNGFNVHTIYSSFFGSLALGLLSHYMARKQKEPAIIFMVTGIIPLVPGGLAYDATKN
                     LVLLNFSTAINTMLEVTLIAGAIALGLLFADQISKLIVSGFVKSFKRL"
     gene            complement(13070..14554)
                     /locus_tag="O6Y56_001132"
     CDS             complement(13070..14554)
                     /locus_tag="O6Y56_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HDB5574397.1"
                     /translation="MEKKNKQIDRGDLKQNLSEKFVWAIAYGSCIGWGAFILPGDWIK
                     QSGPIAASIGIVIGALLMILIAVSYGALVERFPVSGGAFAFSFLSFGRYVSFFSSWFL
                     TFGYVCVVALNATAFSLLVKFLLPDVLNNGKLYTIAGWDVYITEIIIATVLLLVFMLV
                     TIRGASVSGSLQYYFCVAMVIVVLLMFFGSFFGNNFALENLQPLAEPSKGWLVSIVVI
                     VSVAPWAYVGFDNIPQTAEEFNFAPNKTFKLIVYSLLAASLTYVVMILYTGWLSTSHQ
                     SLNGQLWLTGAVTQTAFGYIGLGVLAIAIMMGIFTGLNGFLMSSSRLLFSMGRSGIMP
                     TMFSKLHSKYKTPYVAIIFLVSVSLIAPWLGRTALTWIVDMSSTGVSIAYFITCLSAA
                     KLFSYNKQSNTYAPVYKTFAIIGSFVSFIFLALLLVPGSPAALTAPSYIALLGWLIIG
                     LIFFVIRYPKLKNMDNDELSRLILNRSENEVDDMIEEPEKEKTK"
     gene            complement(14675..15043)
                     /locus_tag="O6Y56_001133"
     CDS             complement(14675..15043)
                     /locus_tag="O6Y56_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HDB5574398.1"
                     /translation="MKLFIILGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTY
                     QMYHGLALLIIGVISGTTSINVNWAGWLIFAGIIFFSGSLYILVLTQIKVLGAITPIG
                     GVLFIIGWIMLIIATFKFAG"
     gene            complement(15176..15553)
                     /locus_tag="O6Y56_001134"
     CDS             complement(15176..15553)
                     /locus_tag="O6Y56_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5327 family protein"
                     /protein_id="HDB5574399.1"
                     /translation="MVNRETLITRIEQELVQAEQAQHDHDFEKHMYAIHILTSLYAST
                     SNTPHIGEQQMNHRIPNHNQMPHSQITQPTHQVTAAEIEAMGGKVNMHSAHHHKSYSQ
                     PSNQQQRLATDDDIGNGESIFDF"
     gene            complement(15554..16210)
                     /locus_tag="O6Y56_001135"
     CDS             complement(15554..16210)
                     /locus_tag="O6Y56_001135"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDB5574400.1"
                     /translation="MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFD
                     LTPFENIKVVILGQDPYHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTP
                     HLQDWAREGVLLLNTVLTVRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKP
                     AQQKIKLIDTSKHCIIKSVHPSPLSAYRGFFGSKPYSKANTYLESVGKSPINWCESEA
                     "
     gene            16394..17224
                     /gene="thiD"
                     /locus_tag="O6Y56_001136"
     CDS             16394..17224
                     /gene="thiD"
                     /locus_tag="O6Y56_001136"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001185456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HDB5574401.1"
                     /translation="MALKKVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALTAIVTM
                     DKDTWSHDVTPLPMDVFEKQLETALSIGPDAIKTGMLGTEEIIKRAGEVYEASNAQYF
                     VVDPVMVCKGEDEVLNPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKK
                     AATIIFDKGAKHVIIKGGKALDQDKSYDLYYDGQTFYQLTTDMFQQSYNHGAGCTFAA
                     ATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRIEHIDVEVTEV
                     "
     gene            17758..17925
                     /locus_tag="O6Y56_001137"
     CDS             17758..17925
                     /locus_tag="O6Y56_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein VraX"
                     /protein_id="HDB5574402.1"
                     /translation="MIIYRQYHHEGAPVYEIITKTFQHVSIKCDDSFSDTEIFKLLSL
                     LQDDIDHMKVS"
     gene            complement(18126..18395)
                     /locus_tag="O6Y56_001138"
     CDS             complement(18126..18395)
                     /locus_tag="O6Y56_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574403.1"
                     /translation="MKFNEIWINEYLALVNDDNPIHNEIVPGQLVSQMMLMAMSIEAN
                     QCQINYVKPILINENIEFIEEHEQEMIAINDDGEIKIKISLSTKK"
     gene            complement(18398..18763)
                     /locus_tag="O6Y56_001139"
     CDS             complement(18398..18763)
                     /locus_tag="O6Y56_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein VraC"
                     /protein_id="HDB5574404.1"
                     /translation="MQHYLLDSNQRLNVSFSKDSVAAYYQCFNQPYRKEVPPLMCASL
                     WPKFDLFKKYANSELILTKSAINQTQKIEVDTIYVGHLEDIECRQIRNITRYTMALTL
                     TKNDQHVITVTQTFIKAMK"
     gene            complement(18738..19877)
                     /locus_tag="O6Y56_001140"
     CDS             complement(18738..19877)
                     /locus_tag="O6Y56_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HDB5574405.1"
                     /translation="MNQAVIVAAKRTAFGKYGGTLKHLEPEQLLKPLFQHFKEKYPEV
                     ISKIDDVVLGNVVGNGGNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQA
                     GAGKVYIAGGVESTSRAPWKIKRPHSVYETALPEFYERASFAPEMSDPSMIQGAENVA
                     KMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVKGEIFNTDESLKSHIPKDN
                     FGQFKPVIKGGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSN
                     FPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGAL
                     ASGHPYGASGAQLVTRLFYMFDKETMIASMGIGGGLGNAALFTRF"
     gene            complement(19879..21255)
                     /locus_tag="O6Y56_001141"
     CDS             complement(19879..21255)
                     /locus_tag="O6Y56_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HDB5574406.1"
                     /translation="MNVILEQLKTHTQNKPNHIALHIDDETITYSQLNARITSAVESL
                     QKYSLNPVVAINMKSPVQSIICYLALHRLHKVPMMMEGKWQSTIHRQLIEKYGIKDVI
                     EDTGLMQSIDSPMFIDSTQLQHYPNLLHIGFTSGTTGLPKAYYRDEDSWLASFEVNEM
                     LMLKNENAIVAPGPLSYSLTLYALLFALSSGRTFIGQTTFHPEKLLNQCRKISSYKVA
                     MFLVPTMIKSLLLVYNNEHTIQSFFSSGDKLHSSIFKKIKNQANDINLIEFFGTSETS
                     FISYNLNQEAPVESVGVLFPNVELKTTNHDHNGIGTICIKSNMMFSGYVSEQCINNDE
                     WFVTNDNGYVKEQYLYLTGRQHDMLIIGGQNIYPAHVERHLTQSSSIDEAIIIGIPNK
                     RFGQIGVLLYSGDVTLTHKNVKQFLKKKVKRYEIPSKIHRVEKMYYTASGKIAREKMI
                     SMYLRGEL"
     gene            complement(21799..23199)
                     /locus_tag="O6Y56_001142"
     CDS             complement(21799..23199)
                     /locus_tag="O6Y56_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5574407.1"
                     /translation="MDFNKENINMVDAKKAKKTVVATGIGNAMEWFDFGVYAYTTAYI
                     GANFFSPVESADIRQMLTFAALAIAFLLRPIGGVVFGIIGDKYGRKVVLTSTIILMAF
                     STLTIGLLPSYDQIGLWAPILLLLARVLQGFSTGGEYAGAMTYVAESSPDKRRNSLGS
                     GLEIGTLSGYIAASIMIAVLTFFLTDEQMASFGWRIPFLLGLFLGLFGLYLRRKLEES
                     PVFENDVATQPERDNINFLQIIRFYYKDIFVCFVAVVFFNVTNYMVTAYLPTYLEQVI
                     KLDATTTSVLITCVMAIMIPLALMFGKLADKIGEKKVFLIGTGGLTLFSIIAFMLLHS
                     QSFVVIVIGIFILGFFLSTYEATMPGSLPTMFYSHIRYRTLSVTFNISVSIFGGTTPL
                     VATWLVTKTGDPLAPAYYLTAISVIGFLVITFLHLSTAGKSLKGSYPNVDNEQDRAYY
                     TEHPKEALWWVKERKD"
BASE COUNT         7545 a         4369 c         3507 g         8161 t
ORIGIN      
        1 accaccacct aaataaatat ataaaactat tgataaacaa agactcttta aagtgggaaa
       61 tatgattatc ttattgcttt tatttttgtt ttcattatag atttgtaact ttaacttttg
      121 atttaaatat agaaaaaaca gaaaaatacc tagtattatg atgcaacaaa ttaaaattac
      181 tatactatat tcatatttaa cgataaataa atgggaatac cttcttaaca taacaccaaa
      241 taagaccgta cttcctgcca ctggccaaaa agaattgatt ttagttggct tcacaatgtt
      301 taaagtttca aaatcttttt cgctgatttt gacgtacttt tttggaatca gccaattaat
      361 cattgggaaa aagagtgcta accatgtgct tactaaatca atcatcaaat attcatcttt
      421 gtatttgata attttatatt tgggattttt attaatattt tcagtttcac aaagcaatat
      481 ttaccagctc catttcatag ggtttatatg atcagaaata ctttttgtag cttgaccaac
      541 aacattccca acactatcta tagctttttc tgtagatttt ttagcaacat cgataccgtc
      601 gtctatttta tgtcctaccc agtctgcttt atcctttata ccagctatat tattttgata
      661 agcccaatct gttataaatg taaaaagtgt acctacagca aaaccagcta atactgtcca
      721 tccaaccgga ttagtcgcga gtgctgcagt aatagcaatt ccagcaccag tacctattcc
      781 tgtagttaaa gcattatgcg acaacgcctc accaaatgtt ttatcatcat ttgcaagatc
      841 atcatacata cctataccaa atcctacacc tgcaacacct ttgcctaggt attttccgcc
      901 ttttgcaaat ttactaccat tttctataaa cacattacct gatgtacgtt tgacttccac
      961 aaatgaattt ggaccggctg ggcctttcac tccacctgct gtattgataa atacaccgaa
     1021 tttacttgca tttataccgc cttgctctaa aagtgttgac gtaatatcta atcctatatc
     1081 tcgtttaata ctatctttat tgtcatttat atatttcatt atacttttcg ggatatcgtc
     1141 ttctggatgt tctttggcat atgcctttat aacagcaaag tctgctttat ttaaagtttc
     1201 tttctctgct ttttgttcaa ttttccccat agcaactttc aaatattttt catgacttgc
     1261 tttggcccaa tcaagttctt tgcctgaagg aatattaaat tgatttgttg aaaagttcca
     1321 aaaattctgc gcttgggtaa gtccttgttg gacaattttt tgaaattctt caacttcttt
     1381 aaatatttct ggtgattttt gattaaactc acgcaatttg cgtagcttct cttctaattc
     1441 atgtttttgt tgacctaatg ttcgtattat ttgttggttc gatgaaatgg cttgctgatt
     1501 atcggaagca tgctttttca aattgttatt caaattttca tatcgcgtaa tttgttgact
     1561 taatgatctg atatcttctt caagctctga ttcttttaaa gatatgctat caacctcact
     1621 cgtataacgt gacacaaaat tatcgcaagc ttgcttcgtt aaatcactca atgttttcat
     1681 acttgttgat aatggaatta acaccgtact aaaaaattgc ttagctgacg tataagcttt
     1741 acctttaagc gcatcatcat tgataaattg agtaattgct ttttccaacg catcataatt
     1801 tgaattcatt gtttgactca aattacccac acttgaagct tggtttcgag atctgtctaa
     1861 atacatgtca atactcatcg gcatgctcct ttttcaaaaa tatatgattt tcaaactatt
     1921 tataattaaa tgctttttac atctataaag ttgtaaaatt ttaaaactcg gcgatgatta
     1981 tttcttatgt aaaggagcct agatgcaggt aaattgagat aacatgtcgc cttttttctt
     2041 attttagcat atggatataa tggtgtcttt gtatattcgc aattaatcaa taaaaattat
     2101 ctttcaatat tttaatttta ttgctacaac atccttaacc taatatatat taatatctca
     2161 aaatatattt acgatttaaa tatgtcacta gttgttaaaa gtacttcctc atcatgcgaa
     2221 atatcaaaac gtctctaaaa tacgaacaag tttacaaaat catacaacat catcattcaa
     2281 aattttattg cccttatttt caatattcat ttcatatcta tcagttcata cataattaaa
     2341 atttcaattg tgcaatctca ccgttaatgc aacaactttc aaataataac tcatcacaat
     2401 aaacacacct aattcaacac ttttcaaaca taagtattga cacattgagc aaaatgattt
     2461 ttaattgtaa ctaatacagt tacaattacg aggtgagaaa cattgaattt agaatttaac
     2521 attgccgtgc atgtattagc ttttttaact aagcatcatt cagaaaaatt caatagtagt
     2581 tcattagcag aattaacttg tttaaatcct gttcaattac gacgcgtgac gactcaactt
     2641 gtcgatttaa aaatgattga cacaatacga ggtaaagatg gcggttattt agcaaatgct
     2701 cgtagcgctg atgtctcttt agcaacatta tataaacatt ttgtcttaga gaaagaacat
     2761 cacacacgac tatttactgg cgacgaaggc agtcactgtc aaattgctcg taatattgca
     2821 actaccatgt cacattatca acaagacgaa cagaatatca ttattaattt ttataaagaa
     2881 aaaacaatca aagatgtcat tgaagacatt caaaaggagg atttatgtca tgaaaacata
     2941 tgatttaatt gtaataggat ttgggaaagc tggcaaaact ttagcgaaat acgctgcatc
     3001 aacaggtcaa cacgtcgcag ttatcgaaca atcttcgaaa atgtatggag gcacttgtat
     3061 caatatagga tgtatacctt cgaaaacact tgtacatgat ggattagaag gcaaatcctt
     3121 tgaagcaagt tataaccgta aaaacgatgt tgtcaatgcg ctaaacaata aaaattacca
     3181 cttattagca gacgataaca acattgatgt actggatttt aaagcgcagt ttaaatctaa
     3241 tactgaagtg aatttattag atcagcatgg cgatatcgtc gatagtatta ctgcacctca
     3301 tatcattatt aataccggtg ctacctctgt cattcctaac ataaaaggcc ttgatcaagc
     3361 taaacatgtc ttcgattcaa caggtttatt aaacattaac tatcaaccta agcacctcgt
     3421 tattgtaggt ggcggttata tcgccttaga atttgcttca atgtttgcga atttaggtag
     3481 taaggtaaca gtattagaac gtggtgaatc atttatgcca cgcgaagatc aagatgtcgt
     3541 tgcgcatgct attactgact tagaaaataa aggcattgca ttgtatacaa atgttgaaac
     3601 gactgaattg tcatctgacg atcatcatac aacagtccat actaacgttg gtaactttga
     3661 ggctgatgca gtacttttgg ctatcggacg caaaccgaat acggatttag ctttagaaaa
     3721 tactgatatc gaattaggcg acaaaggcga aattaaagtc aatgctcatc ttcaaacaac
     3781 tgtgccgcat atttatgctg caggtgatgt taaaggcgga cttcaattta cgtatatatc
     3841 tttagatgat tatcgaatta tcaaatcagc gttatatggt aatcagtcac gtacgactga
     3901 caatagaggc agcgtacctt atacagtatt tatagatcca ccattatcac gtgttggatt
     3961 aactagtaaa gaagctgccg ttcaacatta tgattacact gaacatcaac ttttagtaag
     4021 tgctatacct cgtcacaaaa ttaacaatga tccaagaggt ttatttaaag tagtcattaa
     4081 taatgaaaat aatatgattt taggtgctac attatatggt aagcaatctg aagaattaat
     4141 taatataatt aaaattgcga ttgatcaaaa cattccatat accgtattac gagataatat
     4201 ttatacgcat cctacgatgg ccgaatcatt taatgattta tttaatttct agacaaaaca
     4261 gaaaaacctg gtggcacgca ttgaatgatg ctgccatcag gctttattgt tgtgcttttc
     4321 gcttttctaa tttttcttta agctttctat cttgttcttc tttacgacgt ttacgttctt
     4381 catgtcgttt tcttaaacgc tcttcttctt caggatcacg tggtttcttt aattgttgag
     4441 aaactttttc gattaattct tcttcagtaa gcgcagccag tgggcggtta ttaacaaaag
     4501 tgaatgtttt tcggcgtcca ggtccacaat aagattgaca acctatcacg atttcagcat
     4561 cgggatctaa tttttccaac ttcttttgta acgttctaat attgactgcc tgacattcat
     4621 cacaaataag gaatgtattt ttcatattgc tacccacctt tctttatcat atctatatcg
     4681 tcgatttcat taattttttc gttaactcta tctattttac tctttttaat atttttttca
     4741 agatacgtaa cacggctggc aataaaaaat ggagcattta tcttctaatt aaattagatg
     4801 attgctcccc tatcaaatca tttattgccc atgataaata ttaaatttta atggtttaat
     4861 accatgtttt gtccattcat cataaatttt ttctttatct acatctttat tgataattgt
     4921 aataccacag tctccaccac cagcgcctga tgttttagat gcgccgtgat acttttcagc
     4981 aatatcacac aaatatttta gcttttccgt ttctatatca actgtagctt ctttatccat
     5041 acgttgaata attgtacgat tctgacgcac catcttttgc acacctttaa tgttatttgt
     5101 tttaaaagca tgaataagtt tttcaacaca acgatgtgaa tcttctaaga agtcaccgta
     5161 aaatgaagga tctgatttca aacgtttcac ttcgctaaca aagtgtggtg atgacgccgg
     5221 tgagccagtc caaccgataa gtacttccat attttcaggt gcttgtaatg gttcgatgtg
     5281 caatccaggc cagtttttga ttaaaacttc ttcaaccgta gtatcttcaa tttgatgctt
     5341 gacccattca tgatcaaaag tactatacgc taaccatcca ctatatacac tcacagcaat
     5401 atctccgcat gaacttaaac tttgtaactt catatttgca atcactgcta gtttataaat
     5461 atataaatta gataacttca tatcataaaa ttcatttaat acttttataa ctgacacaag
     5521 tactgctgca cttgaaccta atccatattt atgaccattt gaatcatcta aattactgtc
     5581 aatagtcaga tgaaaatgct tcatcgctat atcgcaactt ttcgcgtatt gttcaaatat
     5641 ttcaatagct gtgaccacat aatttaattg ctttgctgca tgtggatctg aaatgacaat
     5701 actatcttca tctctactaa atgtaactgg gttatgatgt aatgcttttg aatgaatggt
     5761 acctttatat tggtctgctt cttcaatagt agcagttaca aaacgatcta acgcaataag
     5821 tacagattta tatcctggtt ctgttacagc atattctcca gcaatataaa gttttccggg
     5881 tgctttgacc tgaatcattt tatctcttcc ttactcaatt atttcaattc ctgtggcaat
     5941 aatgtcacta tcaataattt ggttattatc aaactgtgtt aataatttat ctataatctg
     6001 ttgcttgttt ttcttttcta caagtatttt cacattagga cccgcatcca tcgtaaaata
     6061 gcacggatac cccgcttctc ggcattcgtg aacgagcgcc attacatcat aactttcttg
     6121 cacaagatat gtgaacggcg gtgttgatcc taaattcgtg gcatgcatac gcaaaccatt
     6181 ttcttcaatt acttcaccaa ggcgtttaaa atctttgtct tgaatcgctg cttttgcttc
     6241 agctaaatct tcatcaatat gatctaacca atattgataa aaccttgatg tgtttcgtgt
     6301 caatgacata ccatatcgac taggtacctt tttagaatgt tgattaatca caacaaatat
     6361 catggcaagg tcatcttcaa aatgattcga ttcaagtgga acggcatatg acgtctcatc
     6421 actataccct ttttcccatt ctgcaaatcc accataaata ctacgtgacg cagaacccga
     6481 accaattcgc gccaatctcg ataaatcctt atctgacagc tgcaagtcta gtgcttgatt
     6541 acaagctgct gctaaagctg catatgcgct tgctgatgaa gccaaccctg ctgctgttgg
     6601 tacaaaattg tcgctttcaa tttctgcata ccaatcgatg ccagctctat ttctgacaat
     6661 atccatatat tttgaaattt tctctaattc tttgccacta accttttcac cattcaacca
     6721 aaattgatcc tgtgttaact ggtcgttaaa agtgactttc gtttcagtgt aaaatttttc
     6781 taatgtaaca gatatgctat tattcattgg aatgattagt gcttcatctt ttttacccca
     6841 atattttata agtgcaatat tcgtatgtgc acgtgctttg ccacttttaa tcaacgcatt
     6901 aacctcctaa attctcaatc caagtatgtg ctgcaccagc tttttctaca gcttttacaa
     6961 tatttttcgc tgttggtaaa tctttggcaa gcaataacat actgccgcca cgaccagcac
     7021 cagtaagttt tccagcaatc gcaccatttt ctttaccaat tttcattaat tgttctattt
     7081 tatcatgact aactgtcaac gcctttaaat ccgcatgaca ttcattaaaa atatccgcta
     7141 aggcttcaaa gttatgatgt tcaatcacat cactcgcacg taaaactaac ttaccgatat
     7201 gttttacatg tgacatgtac tgagggtcct cacaaagttt atgaacatct tctactgctt
     7261 gtcttgttga acctttcaca ccagtatcta taacaaccat atagccgtct aaacttaacg
     7321 ttttcaacgt ttcagcatga cctttttgga accaaactgg tttgcctgat acaatcgttt
     7381 gcgtatcaat accacttggt ttaccatgtg caatttgctc tgcccaatta gccttttcaa
     7441 tgagttcttc tttcgttaat gattttccta aaaaatcata acttgcacga acaaaagcaa
     7501 ccgcgacagc tgcactcgat cctaatccac gtgatggtgg taaattcgtt tggatcgtta
     7561 ctgctagcgg ctctgtaata ttatttaatt ctacaaaacg gttcaccaaa gacttaagat
     7621 ggtcaggcgc atcatataac ataccatcgt aaacatcgct tttaatagac gaatagttcc
     7681 cgctctctaa ggcttctatt aaaactttga ttttacctgc gttaaacggt actgcaatag
     7741 caggctctcc aaatgtaaca gcatgttctc ctattaaaat aatcttacct gtcgattccc
     7801 catatccttt tcttgtcatg tcaatatcac cttttatatt tatcctatac ttgattcatt
     7861 atttttattt attagtaaaa gacatcatat tctaagttgc atacgcattc gcgttaaatt
     7921 tcattgcagt ctttatctca cattattcat attatgtata atctttaatt tgaattaata
     7981 tttgacttaa cttgattagt ataaaactaa ctttcgttta cttcaaagtt taaatcttat
     8041 cgagtgatat ttcagattct ttatcttttt ataaaatagc cctacaattt ataattttcc
     8101 accctaccta taatactaca aataataatt ggaatatata gatttactac taaagtatta
     8161 gaacatttta atggaaggtt cgttctttca tagtcatacg catcatatat accctattct
     8221 caatctattt aatacgtaaa acatgaaatt ttcttattaa atttattatt tcaatcatat
     8281 cattactttt aatttaatga tgttcaattt aaatattagg tcaataacat atttatgcta
     8341 tttatggata ctttcaaaaa taacagcccc aaacgataac ttgaaagggg ctgttaaata
     8401 tttaactatt gcatttggtc tatcattttc ttgtttcttt caatcatttt atcaaaatac
     8461 gtatcgtatc tttgccattc ttcttgagta atgggcgtca tatttaatac accgccaaga
     8521 tctttgattg catataatag taaaaacatt acatcttgaa cagtaatcgt tttgttaagc
     8581 aatgtctcta atgaggccat acaagatggt tcaatttcag gatatttaaa tttagtcact
     8641 tcacctttta aagcatgttc ataaaatgtt tgcatcatca atgcacgttc tgaaccagag
     8701 ccttcaacac aaagataaat ttgtacagca ataccgcctc taactcttcg ttgcgatatg
     8761 cctgcaaatt tcttaccatc gatacttaag tcaaattttc ctgggcaata agaatgttca
     8821 atttccatcg tatcaatatc aacattctca tcttcgaaca ttttgctaat taagaggtac
     8881 atcacagtaa acgcttcatc aatcgttgtt tctgtttgtc ctttgaacat cagcgatata
     8941 tttaatacac cttgatctag aacgacacct aagccaccag aatttctaac aatggcatta
     9001 taaccaatct cattcgttaa ataatcaatg ccatctttta aaaacggcaa tcttgaatca
     9061 tgaataccaa gaataacagt atgttgatga atccaagtac gcacaacatt atctgatata
     9121 tctttgccca cactttcgca aaatgtatca tcgaatgcga aagattgcat aggctctaat
     9181 ccagaagaat ggtcgatata tcgccagttg acgccattaa aatatttact cgctaaatcc
     9241 atcgttattg taaggcttgc gctgctgtaa taattgaaag attgtataca tcttcaattg
     9301 agcagccacg tgataagtca tttactggag aatttaaacc ttgtaatact ggaccaactg
     9361 catcatatcc acctaaacgt tgtgcaattt tgtaaccaat attaccagct tctaaacttg
     9421 ggaatacaaa gacatttgca tcaccttgta atttagcacc tggcgctttt ttctcagcaa
     9481 cacctggtac aatcgcagca tcaaattgga attcgccatc aatgattgct tctaattttt
     9541 cttcttcagc tttttgttgt gctaatttga cagcttcttg aacttttgtc acgtcgtctg
     9601 atttagcaga cccttttgtt gaaaagctta acattgcaac ttttggatcc atgccaaagc
     9661 ttaatgctga ttttgcactt tctactgcaa tttctgcaag tccttgtgaa tcaagttctg
     9721 gattgattgc acaatcacca aagatgtatt gttcatcacc tttaatcata aagaagatac
     9781 ctgatgttct tgatacacct ggtttcgttt tgatggtttg taaagctgga cgcacagtgt
     9841 cgcctgttga atgtgctgca ccactaacta gaccatctgc tttaccagca taaacaagca
     9901 ttgtaccgaa gtagttcaca ttgtttaata attcttgtgc ttgttcttca gtcgctttcc
     9961 ctttacgtcg ttcaacaaat gattgaacta attcagcttt caattcactt gtcgcaggat
    10021 taattaattc aatattagaa atatcaagat taagtttttg cgctaaagat tgaaccttag
    10081 tctcatcacc taacacgatt ggtgtaacat aatctgttgc ttgtaattgt gttgcagctg
    10141 ttagaacacg ctcgtcctct ccttcaggta atacgatttt aacgttttta ccagaaagtt
    10201 tgtcttttaa tacatttaat aaatcagcca taatgtcctc ctgtaatata aatcttatta
    10261 atcattcacg gtataattat acgccatttt atttcataat gccacgtcac caatttgtaa
    10321 tcataatttt atcgttaccc ctttgcttta tgataaaatt tataaagaac tgatgatttt
    10381 tgaaaaggag cgataaacat gagtcaagca gccgaaacat tagatggttg gtatagtcta
    10441 catttatttt atgcagttga ttgggcatca ttacgtctag ttccaaagga cgaacgcgat
    10501 gcacttgtca ctgaatttca atcattttta gaaaatacag caactgtaag atcatcaaaa
    10561 tctggtgatc aagctattta taatataact ggtcaaaaag cagatttgtt attatggttc
    10621 ttacgtcctg aaatgaagtc tttaaatcat attgaaaatg aatttaacaa attgcgcatt
    10681 gctgacttct taatccctac atattcatat gtatcagtca ttgaattgag caattattta
    10741 gctggtaaat ctgatgaaga tccttatgag aaccctcata tcaaagcaag attataccca
    10801 gaattaccac attctgatta tatttgtttc tatccaatga acaaacgtcg taatgaaact
    10861 tataactggt acatgttaac tatggaagaa cgccaaaaat taatgtatga ccatggtatg
    10921 attggtagaa aatatgctgg caaaatcaaa caatttatta ctggttctgt agggtttgat
    10981 gatttcgaat ggggcgtaac attgttctca gatgacgtat tacaattcaa aaaaattgta
    11041 tacgaaatgc gctttgatga aacaacagca cgatacggtg aattcggtag tttctttgta
    11101 ggacatatta ttaacacaaa cgaattcgat caattctttg cgatttctta atacattgtt
    11161 acgtttataa attaataaaa aattccaagc ttatcggttt aagcttggaa tttttcgttt
    11221 atcttcagta tattcccgta tacataagac gtgatttggt aaatagttga aatctgtatg
    11281 tttaaactta tatatatgtg ctaatgtatt atcaataaca aagtacactt tgctcatagc
    11341 aaagtgtacc cgagtagtct tccttgggag aactttaact actatcacta catataaacg
    11401 ttaacctcaa tagaaattat acagtcgcta ctctatacaa tttttgtaat ggttaactaa
    11461 tattatttta acctatttga aatatttgaa acatattttt gtcgaatttt tttcaataat
    11521 ttttcctttt tatacttcaa gagaatttta accactaaaa attccgatga ttattattac
    11581 aatagtatca aatattagtt ttttaaaatc aataacaact tatcaaaatg ctcatgtggt
    11641 tattttatag tgtataaact ataatgagta ttaaattctt ataaacaatg gtgatgaaat
    11701 ggacataaat tcagaagaat acaaacaaga ggtacttata aaagatgttg tcatgcttgc
    11761 tgctcgcata ctattagaat ctggtgcaga aggtacgcgt gtagaagata ccatgacacg
    11821 tattgcaaaa aaacttggtt acagtgaaag taacagcttt gttacaaaca ctgtcatcca
    11881 gtttacatta cattcggaat cgtttcctag aatatttaga attacctctc gagatacaaa
    11941 cttaataaaa atttcgcaag ctaataaaat ttcacgtcaa attacaaaca atgaaatttc
    12001 tttagccgag gcaaaaacgc aacttgaaaa aatatatgtt gctaagcgtg acagcagttt
    12061 tccctttaaa ggtttcgctg cagcaatgat tgcaatgagt ttcttatatt tacaaggtgg
    12121 tagattgatt gatgttttaa ctgcgatatt agcaggtagt ctaggatacc tagtcactga
    12181 gattttagat cgtaagttac acgcacagtt tatcccagaa ttcattggtt cattagttat
    12241 tgggattatc gccgtcattg gacatacact tattccaaca ggtgacttgg caactattat
    12301 cattgcggca gtcatgccta ttgttcctgg tgtattaata acaaacgcaa tacaagattt
    12361 atttggtgga cacatgttga tgttcacaac gaaatcatta gaagcattgg ttactgcgtt
    12421 tggcatcggt gctggcgttg gtagcgtatt aattttagta taggagtatc agactatgtt
    12481 ttggatctta aactttatct ttagcttttt agcttcaatg ttcttctgcg tcatttttga
    12541 tgcacctaga aaattatatc tatcatgtgg tttcgttggt acgtgtggat ggatggttta
    12601 caccttattc ttcaacggct ttaatgtgca tactatatac tctagtttct tcggcagtct
    12661 tgccctaggt ttattaagtc actatatggc acgtaaacaa aaagaacctg caatcatttt
    12721 tatggtgacg ggtatcatcc cattagtacc aggtggatta gcttatgatg caacgaaaaa
    12781 tttagtatta ttaaatttca gtacagcaat caataccatg ctagaggtta cacttattgc
    12841 aggagccatc gcattaggtt tattattcgc cgaccaaatt tccaaattaa ttgtttctgg
    12901 gttcgtgaaa tcttttaaac gattataaat atttcttaga aatggctcag ccttaactct
    12961 tagcaatttt atatgaggtt taactgcctc gtcttaaatg tcaatttatg atacaaaaaa
    13021 tcgcacgata cgccttcgaa ttaagaaggt atactgtgcg attcttttat tatttagttt
    13081 tttctttttc aggttcttca atcatatcat caacttcatt ttcacttcta tttaaaatca
    13141 agcgacttaa ttcatcatta tccatatttt tcaatttagg atatcgaatc acaaagaata
    13201 ttaaaccgat gattaaccat ccaagcaatg caatataaga cggtgcagtc agtgctgcag
    13261 gagaacctgg cactaataac aacgctaaga aaatgaatga tacaaatgag ccgataatag
    13321 caaacgtttt gtaaaccggt gcatacgtat tactttgttt gttataactg aataatttcg
    13381 cagcagacaa acatgtaata aagtaggcaa tggatacacc tgtagatgac atatctacaa
    13441 tccaagtcaa tgccgttctt cctagccaag gtgcaattaa agagacactt actaagaata
    13501 tgattgcgac atatggtgtt ttgtatttac tatgtaattt actaaacatt gttggcataa
    13561 tacctgaacg tcccatagaa aataacaagc gacttgaact catcaagaat ccatttaaac
    13621 cagtaaatat acccatcata attgcaattg ctaatacacc taatccaata taaccaaatg
    13681 ctgtttgtgt aacagcacct gttaaccaca actgcccatt taaactttga tgacttgttg
    13741 ataaccaacc agtgtataaa atcatgacaa cataagttaa tgatgctgct aataaactgt
    13801 acacgataag cttaaatgtc ttgtttggtg caaagttaaa ctcttctgct gtttgtggaa
    13861 tattatcaaa tccaacatat gcccatggtg ccacggatac aataaccaca atagacacta
    13921 accatccttt gctaggttca gctaacggtt gtaaattttc aagtgcaaaa ttattaccaa
    13981 agaatgaacc aaagaacatc aataatacga ctattaccat cgccacacag aaataatatt
    14041 gtaatgatcc agatacactt gcgccacgaa tcgttactag catgaataca agtagtaata
    14101 cggtcgcaat aatgatttcc gtaatataaa cgtcccagcc cgcaatggtg tatagtttcc
    14161 cattatttaa gacatctggc aataagaatt taactagtaa actgaatgcg gtcgcattta
    14221 aagcaacgac acagacataa ccaaaagtta aaaaccatga tgagaagaaa ctcacatatc
    14281 tgccgaaact taagaaacta aaggcaaacg cgccccctga tactggaaat ctctctacta
    14341 atgcgccata actaaccgca attaatatca ttaataatgc accaataaca ataccaattg
    14401 atgctgcaat cggacctgac tgcttaatcc agtctcctgg taagatgaat gcgccccatc
    14461 cgatacatga accatatgca atcgcccata caaacttttc agataggttt tgttttaaat
    14521 cgcctctatc tatttgctta ttcttttttt ccataaataa aaactcacct cgaaggtatt
    14581 ctatacccaa aagatgagtt tgtaactctt tttcttgatt atttttatta aaaatttaat
    14641 gtttagttac ataggtaatc taaagtttta aaatttaacc agcaaatttg aatgtcgcaa
    14701 tgattaacat tatccatcca atgatgaaca atacgccacc aattggtgta atcgcaccta
    14761 aaactttaat ttgagttaat actaaaatat ataatgatcc actaaagaaa ataataccag
    14821 caaatattaa ccagccagcc cagttaacat tgattgaagt tgtaccacta attacaccta
    14881 taattaataa tgctaagcca tggtacattt gatacgtcgt tgctttttcc catactgata
    14941 agtagtgatc acttattttt ccttgtaaac catgcgcacc aaatgcacct gttccgacag
    15001 ccatcatcgc gtttaatgca cctaaaataa taaataattt cattgctacc tctccttata
    15061 taattcagta ttaataaatg tttaaatccg aacactcgaa taaaagtata tgcgtcttga
    15121 ttattaacct acatacttag caagctatta agcaattatg tttcattgtt gctttttaaa
    15181 aatcaaatat ggattcacca ttgccaatgt catcatctgt cgctaatctt tgttgttggt
    15241 ttgaaggttg tgaatatgac ttatgatgat gcgctgaatg catatttact ttgccaccca
    15301 tcgcttcaat ttcagcagct gtcacttgat gtgttggctg cgtaatttgt gagtgtggca
    15361 tttgattatg gttaggaata cgatgattca tttgttgttc accaatatgt ggtgtatttg
    15421 atgttgaagc atataaagat gttaatatat gtatggcata catatgtttt tcaaagtcat
    15481 ggtcatgctg cgcctgctct gcttgtacta attcttgctc tattcgtgtt attaaagttt
    15541 ctctattcac catctacgcc tcactttcac accaattaat tggtgatttt cctactgact
    15601 ctaaataggt attcgctttg gaatacggtt ttgatccaaa gaatcctcta tatgcagaca
    15661 gtggactagg atgtactgat tttataatac aatgtttaga tgtatcgata agctttattt
    15721 tttgctgtgc aggtttcccc cacaaaataa agacaacatg ttctttataa tcagacactg
    15781 ctttaataat ttcatcagta aatgtttccc aaccaatatc acgatgagaa tttgcttcac
    15841 cctgtcttac ggttaaaact gtattcaata acaagacgcc ttctcttgcc caatcttgta
    15901 aatgtggtgt ttgtctaaca catccaatat catctgctaa ttctttatac atattacgta
    15961 aagatggagg gaattttgcg ttaggttgca ctgaaaatgc taatccatgt gcttggtttg
    16021 gaccatgata cgggtcttgt cctaatataa caactttgat attttcaaac ggtgttaaat
    16081 caaacgcttg atatatattt tccctatcag ggtatacgat tgcagtcgaa tattcttttt
    16141 ctaaaaaatc atgcatagct ttaaagtcat gtttcgttgt tatgtcatga aaaatttgcg
    16201 accattccat tcaatctcac ctcaggacat attttaacat atcacactta tctaaagtga
    16261 atgacatttt caaaagttac aatagtatga atgattcatt tcaacaatca tcaaatattg
    16321 aatgcttaat atttttcaat taggttaaaa atgatatgat gaatacaata ttattatgta
    16381 ggagtgaagc tcaatggctt taaagaaagt tttaacaatt gccggttctg acacaagtgc
    16441 tggcgcaggt atgcaagcag atttgaaaac gttccaagaa ttagatacgt atggcatggt
    16501 cgctttaact gccatcgtta ctatggataa agatacatgg tcacacgatg tcacaccatt
    16561 acctatggac gtatttgaaa agcaacttga aacggcttta tcaatcggac ctgatgctat
    16621 taaaacaggt atgttaggta ctgaggagat aatcaaacgt gctggagaag tatatgaggc
    16681 atctaatgca caatactttg tagtagatcc tgtcatggtt tgtaaaggcg aagatgaagt
    16741 gcttaaccct ggaaatactg aggcgatgat taaatattta ctacctaaag caacggtagt
    16801 gacaccaaac ttatttgaag caggtcaatt atcaggatta ggtaaattaa attcaattga
    16861 agatatgaaa aaggctgcaa caattatctt tgataaaggc gcaaagcatg tcatcattaa
    16921 aggtggcaaa gctttagatc aagataaatc gtatgactta tactatgatg gtcaaacatt
    16981 ttatcaacta actacagaca tgttccaaca aagttataac catggtgctg gttgtacatt
    17041 tgctgcggca acaactgcat atttagctaa cggtaagtca ccaaaagaag ctgtgattag
    17101 cgcgaaagct ttcgtcgctt ctgctattaa aaacggttgg aaaatgaatg attttgttgg
    17161 tcctgtggat cacggtgcat acaaccgtat tgaacatatc gatgttgaag taacagaggt
    17221 ttaatgcttc gttcataaaa aatagattaa ccacacctta tgatttgagt gttattgctg
    17281 tgcgccagta aagttagctt tcaaagacta actttgggga tcagtacata ataaagtcac
    17341 tttcggtgtg gttattttag ttattaaata cttgtttgat tttcacattt aaattgggca
    17401 aataagtttt ataagtcatc gttataggta gttttatttc aacatatgta tataatattc
    17461 atttacagtg tcacgaatca gttatcctaa aaaaacaaat cctttcggaa atttattatg
    17521 cccttgttta aacataacgt tttatcccgc tctactaatt ctgccgtttt tttgaaatta
    17581 aaaataactt ctcaacgact ttataaaaat atattccttt taaaacatga tacataaata
    17641 gtcttagtaa accatacgtt ctatgtctga taaaaagttg atacttaagg ttgatgtcac
    17701 acataaaaat gttatttata atataaccat agagtagcaa aggaggtaat ataggttatg
    17761 attatttatc gacagtatca ccatgaaggc gcaccagttt atgaaattat aaccaaaacg
    17821 tttcagcatg tttcaattaa atgtgacgat tcatttagtg atactgaaat attcaaattg
    17881 ctctctttat tacaagacga tatagatcat atgaaagtta gttaaattga ctaatcgttc
    17941 caataatcca gaatttatta aacattgata tagttgttat tattatttta gattaatgca
    18001 tccccgtgca aagaaagaaa cgtaacctat atttatctct gttcccaata ataataacaa
    18061 tacataactg atattagctg tcctttcatc tcctaattaa tatgcgttca tgcagctaat
    18121 atcggttatt tttttgtgct caaagaaatc tttattttaa tctctccatc gtcattaatt
    18181 gctatcattt cttgctcgtg ttcttcaatg aattcgatat tttcatttat taaaataggt
    18241 ttaacgtagt taatttgaca ctggttcgcc tctattgaca tagccatcag catcatttga
    18301 ctcactaatt gtcctggcac aatctcatta tgtattggat tatcatcatt tacgagcgcc
    18361 aaatattcat ttatccatat ctcattaaac ttcatctcta cttcatcgcc ttaataaaag
    18421 tttgtgtaac cgttatgaca tgttggtcat ttttagttaa tgttaaagcc attgtataac
    18481 gtgtgatatt gcgaatctgt cggcattcaa tatcttctaa atgccctaca tatattgtgt
    18541 ctacttctat cttttgagtt tgattaattg ctgattttgt taaaatcagt tcgctatttg
    18601 catatttttt aaataaatca aattttggcc ataatgacgc acacattaat ggtggtactt
    18661 cttttctata aggttggtta aaacactgat aatatgcagc cacactatcc ttagaaaatg
    18721 acacatttaa tcgctggtta gaatcgagta aataatgctg catttcctag acctccccca
    18781 atccccatag atgcaatcat agtctctttg tcaaacatat aaaataatcg cgtcactaat
    18841 tgggcaccgc ttgcaccgta tggatgacct gatgctaatg caccacccca tatatttaat
    18901 tgcgtatttg aaatatttaa agcttgttgg caggcaacca cctgtgcact gaacgcttcg
    18961 ttaatttcaa tgacttcaat attttctatc gttaattgat ttctttttag taagttggaa
    19021 atggctggta ctggaccaat gccaggaaaa ttagaatcaa cacctaccgt aacaccatct
    19081 ttaaataata aaccatgctc gaaacctaat tcgtatgcca tatctttttc cataataagc
    19141 aataaaactg caccatcatt tttcatacaa ctattcgcag cggtaacggt cccacctttg
    19201 atcacgggct taaattggcc aaagttatct ttcggaatat gtgattttag actttcatca
    19261 gtgttgaata tttctccttt aacggttata ggtaatattt cctgagaaat atttccattc
    19321 tttacatttt ccgctgtcaa ttgatgactt cgataagcaa attcatcttg taattctctt
    19381 gaaacatcat acatcttggc tacattttca gcaccttgaa tcattgatgg gtcgctcatt
    19441 tcaggtgcaa atgatgcacg ctcataaaac tcaggtaatg ctgtttcgta cacagaatgc
    19501 ggtcgtttga ttttccaagg tgctcgactt gtactttcaa caccgcctgc aatatatacc
    19561 ttgccagctc cggcttgaat catacgacat gcatattgaa cactttcaag tccagaccca
    19621 cattgccgat cgattgtgac gccaggtatt gaatctttga gccccgcttc aagcaatgct
    19681 tttcttgcta tattgccacc attcccaaca acattaccta aaactacatc atctatttta
    19741 gatattacct ctggatactt ctctttaaaa tgttggaata aaggtttgag caattgttct
    19801 ggctctaaat gttttaaagt gcctccatat ttcccaaatg cagttcgttt agctgcaact
    19861 atgactgctt gattcatatt ataattcacc tctcaaatac atcgatatca ttttttctct
    19921 agcaatttta ccacttgcag tgtaatacat cttttctaca cgatgaatct tcgatggaat
    19981 ttcatagcgt ttcactttct tttttaaaaa ttgttttaca tttttatgtg taagtgtcac
    20041 atcaccagaa taaagcaata cacctatttg accaaaacgc ttatttggaa taccgattat
    20101 aattgcttca tcaatgctcg acgattgcgt taaatggcgt tcaacatgtg ctggatatat
    20161 attttgacca ccaataatta acatatcatg ttgtcgtccc gttaaatata aatactgctc
    20221 ttttacatag ccattatcat tagtaacaaa ccattcatca ttatttatac attgttcgct
    20281 tacatagcca ctaaacatca tattactttt tatacaaata gttcctatac cattgtgatc
    20341 gtgattcgtt gttttcaatt ccacatttgg aaatagcacc cctactgatt caactggtgc
    20401 ttcctgattc aagttatagc tgataaaact ggtttccgat gtaccaaaaa attcaatcaa
    20461 atttatgtca tttgcttgat tttttatctt tttaaaaata gaagaatgca acttatctcc
    20521 actgctaaaa aatgattgga ttgtatgttc attgttgtaa actaacaata atgatttaat
    20581 catcgttgga acaagaaaca tagcaacttt gtatgatgat attttacgac attgattaag
    20641 taacttttca ggatgaaaag tggtctgtcc tataaaagta cgaccagaac ttaaagcaaa
    20701 caataacgca tataatgtta acgagtacga tagtggtccg ggggctacta tggcattttc
    20761 attttttaac atcaacattt cattaacttc aaaagaagcc aaccatgaat cttcatcacg
    20821 ataatatgct tttggcagtc cagttgtccc tgaagtaaaa ccaatatgta ataaattggg
    20881 gtagtgctgt aattgcgttg aatcaataaa catcggtgag tctatactct gcatgagacc
    20941 tgtatcttca attacatctt taataccata tttttcaatc aattgacgat gtatagtact
    21001 ttgccattta ccttccatca tcataggcac tttatgtaaa cgatgcaaag ctaaataaca
    21061 aataatactt tgcaccggtg atttcatatt aatagcaacg acagggttaa gtgaatattt
    21121 ctgcaaagat tcaactgcgc tagtgatgcg ggcatttagt tgactatatg taattgtttc
    21181 atcatcgata tgtaatgcta tgtgattagg tttattttga gtatgtgttt tcaactgttc
    21241 taaaattacg ttcatcaata tccctcactc aatgtaaact ttaaaataca tcttgttaac
    21301 attatataat gaataagtat ttttatcagg taaacctgcc tattataaaa atcaaactta
    21361 agccctagat aaatttgata ctgtagtacc atgtttttta ttagttaaga cgttactata
    21421 tgtatataga gaaaagaagt tatcgcaatc gcaataactg acacaaataa gtcacccaat
    21481 ctatttaagt ttgtgttctc tataataata ttgaaggtta gagtctcaat attaattgcg
    21541 ttggacaaaa tactctaaga catatttaca tcctaacatt tcaatagcaa gagaatttta
    21601 agtattcaaa gctaaacata tgctttaagt cccctctttc ccccattgcg ataatcattg
    21661 cagtgggggt ttatgtatat acaaaaactt tattacagct aattacagtt ctcaatttaa
    21721 aaagcacttt aaagttagca gaacctacta gctttaaagt gcttatatac gattgattta
    21781 tactttttat tataatctct aatctttacg ttctttaacc caccataatg cttcttttgg
    21841 gtgttctgta taataagctc tatcttgctc gttatctaca tttggatacg aaccttttag
    21901 agattttcct gctgtactta aatgtaagaa tgtaataact aaaaagccaa taacactgat
    21961 tgctgttaaa taatacgcag gtgctaatgg atctccagtt ttcgtaacta accatgttgc
    22021 aactaatggc gtcgtaccac caaatatcga aacagagata ttaaatgtta ctgataaagt
    22081 tcgatatctt atatgactgt aaaacatcgt tggtaacgac cctggcattg tcgcttcgta
    22141 agttgataag aaaaatccta atataaatat accgattact attacaacaa atgattgtga
    22201 atgtaataac ataaatgcga tgatactaaa taatgttagc ccaccagtac caattagaaa
    22261 tactttcttt tcacctattt tatccgctaa cttaccaaac attaatgcta atggaatcat
    22321 tattgccatg acacaagtaa ttaatacact tgttgtcgtt gcatctaatt taataacttg
    22381 ttctaaatag gttggtaaat atgcagttac catatagttc gtaacattga agaatacaac
    22441 agctacaaaa cacacaaata tatctttgta ataaaatctg atgatttgta aaaagttaat
    22501 gttatctctt tctggttgtg ttgcaacatc attttcgaaa actggtgatt cttcaagctt
    22561 acgacgtaaa tataagccaa ataatcctag gaataaacca agtaagaatg ggattctcca
    22621 accaaatgat gccatttgtt catctgttaa aaagaatgtt aatacagcaa tcataattga
    22681 agcagctatg taacctgata atgtcccaat ttctagtcca ctacctaatg agttacgacg
    22741 cttatctgga gatgattcgg ctacatatgt cattgcaccc gcatactctc cacctgttga
    22801 aaacccttgt agtactcttg caagcaataa tagtattggt gcccaaagtc caatttgatc
    22861 ataacttggc aataatccaa tggttaatgt tgaaaatgcc attaaaataa ttgttgatgt
    22921 taatacaact ttacgtccat atttgtcacc aataatacca aatacaacac caccaattgg
    22981 tcttaataaa aacgcaatgg ctaatgctgc gaaagtcaac atttgtcgaa tgtctgcact
    23041 ctctactgga gagaagaagt tcgctccaat gtacgcagtt gtatatgcat agacaccaaa
    23101 atcaaaccat tccattgcat taccgatacc ggttgcaaca acggtttttt tggctttctt
    23161 tgcatccacc atgttaatat tctctttatt aaaatccatg aattcataca ctcccttttg
    23221 tatgtttcat aattatacgg agttaattag ttttgtcaaa tttatacaaa tataaacttt
    23281 tatataaatg caaaagtatg ttcgacaaaa aatttcactt taacgaatta aattcaatga
    23341 ttttataccc tcgtacattt gaattaaaca ataataattc ttaaatcatc gaacgatcaa
    23401 catattagat ttataattaa aaatagcgat agcacacaac ttcatgtaag tcatatgcta
    23461 tcactacttt cctcatcata tttaaatgtt tatattcaat ttacttcaat aactttgtca
    23521 ttactttggt agtgggacag aaatgataaa gagccactaa tgatttatta tgtagtggtt
    23581 ct
//
LOCUS       DALMNS010000034        23103 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.034, whole genome shotgun sequence.
ACCESSION   DALMNS010000034 DALMNS010000000
VERSION     DALMNS010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 23103)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23103)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23103
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.034"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            15..88
                     /locus_tag="O6Y56_001143"
     tRNA            15..88
                     /locus_tag="O6Y56_001143"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:47..49,aa:Trp,seq:cca)
     gene            91..163
                     /locus_tag="O6Y56_001144"
     tRNA            91..163
                     /locus_tag="O6Y56_001144"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:124..126,aa:His,seq:gtg)
     gene            175..246
                     /locus_tag="O6Y56_001145"
     tRNA            175..246
                     /locus_tag="O6Y56_001145"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:207..209,aa:Gln,seq:ttg)
     gene            252..325
                     /locus_tag="O6Y56_001146"
     tRNA            252..325
                     /locus_tag="O6Y56_001146"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:284..286,aa:Cys,seq:gca)
     gene            333..407
                     /locus_tag="O6Y56_001147"
     tRNA            333..407
                     /locus_tag="O6Y56_001147"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:366..368,aa:Gly,seq:tcc)
     gene            511..585
                     /locus_tag="O6Y56_001148"
     tRNA            511..585
                     /locus_tag="O6Y56_001148"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:544..546,aa:Gly,seq:tcc)
     gene            624..707
                     /locus_tag="O6Y56_001149"
     tRNA            624..707
                     /locus_tag="O6Y56_001149"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:658..660,aa:Leu,seq:caa)
     gene            1205..2266
                     /locus_tag="O6Y56_001150"
     CDS             1205..2266
                     /locus_tag="O6Y56_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIC"
                     /protein_id="HDB5574408.1"
                     /translation="MSNAKNADNKQFFSKILNSIGAGVVIALVPNALLGEVLKIFKSD
                     NEILELTYQLVILIQSFMAFIIGVLAAHQFKFNGAGAAIVGTSAMIGSGAVVYSNNSF
                     MLKGIGDIINTSLVVIIACLIYMVLQNKLGSFELIILPVLVPIVSGGIGLITLPYIRK
                     ITQAIGNVIHSFTDLNPLLMSILISVAFSLLMVTPISLVAIATAISLNGLGSGAANLG
                     IVAACVTFLFGSLRVNSIGVNAVLLIGAAKMMIPVYLKNLIISIPLTINGIITGIIAY
                     VLQVKGTPLSAGFGYTGLVGPINAFNRMSGDPTMNIILLALGYFVIPFVSAFIVHELC
                     KKFIPIYSNDIYKFEVPKQ"
     gene            2525..3982
                     /locus_tag="O6Y56_001151"
     CDS             2525..3982
                     /locus_tag="O6Y56_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500488.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDB5574409.1"
                     /translation="MKCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELR
                     VGLSADYAPMEFEHTVNGKTEYAGVDIDLAKKIAKDNNLKLKIVNMSFDSLLGALKTG
                     KIDIIISGMTSTPERKKQVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKG
                     TEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISN
                     VKFNEEEKDTVIAVPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGFISK
                     YGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML
                     VQVFIVFFGITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSL
                     GLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISF
                     DPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD"
     gene            3975..4697
                     /locus_tag="O6Y56_001152"
     CDS             3975..4697
                     /locus_tag="O6Y56_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDB5574410.1"
                     /translation="MIKINNLNKVFGDNEVLKDINLEINQGEVVAIIGPSGSGKSTLL
                     RCMNLLEVPTKGQVIFEGNDLTEKGTQVDKLRQKMGMVFQNFNLFPHKKVVDNIILAP
                     KLLKKDNNDELHKEALSLLDKVGLKEKADVYPNQLSGGQKQRVAIARALAMHPDVILF
                     DEPTSALDPEVVGDVLKVMKDLAKEGMTMVVVTHEMGFAKDVSDKVIFMADGVVVESG
                     TPVEIFEQPQHERTQNFLARVL"
     gene            4848..5975
                     /gene="queG"
                     /locus_tag="O6Y56_001153"
     CDS             4848..5975
                     /gene="queG"
                     /locus_tag="O6Y56_001153"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000379983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HDB5574411.1"
                     /translation="MDTKQLKQDIIDYAYTIGIDSIGFTTADPFDELKQKLEAYHANG
                     YASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNKLKGAPKSVRGDRRGLFARASWG
                     QDYHTIMRKRLDMLAAFIESKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVIN
                     PKLGTWTYLGEMLVSIPFEPDDPLLDSCGDCTICVDRCPTSALVGNGQLNSQKCISFL
                     TQTKGYMPDQYRYKIGNRLYGCDTCQQVCPKNRGINTEQADIILEPEILKPRLVPLLR
                     MSNKEFKQTYGHLAGAWRGKKPIQRNAILALAHFNEVDAIPELKKVATTDERPMIRAT
                     AYWAIGQILGEEARDFINANYNQEDAEVQNEMIKGLDTRRE"
     gene            5980..6450
                     /gene="trmL"
                     /locus_tag="O6Y56_001154"
     CDS             5980..6450
                     /gene="trmL"
                     /locus_tag="O6Y56_001154"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HDB5574412.1"
                     /translation="MTNHIVLYQPEIPANTGNIARTCAGTNTHLHLIKPLGFRTDDKM
                     LKRAGLDYWEFVNITYHDSIEAFFEATNGEYYLLTKFGKKTYSDFDFSNHDKDFYFIF
                     GKETTGLPDWVKEKYQDTALRIPMSEHIRSLNLSNTAALLIYEALRQQDFPGLN"
     gene            6609..7208
                     /locus_tag="O6Y56_001155"
     CDS             6609..7208
                     /locus_tag="O6Y56_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate isomerase"
                     /protein_id="HDB5574413.1"
                     /translation="MAMNFKVFDNSQLVAEYAADIIRKQFNNNPTTIAGFHLDTDQAP
                     VLDELKKNIEKHAVDFSQINILDYDDKKSYFEALGVPAGQVYPIAYEKDAIELIADKI
                     KTKENKGKLTLQVVSIDEQGKLNVSIRQGLMEAREIFIVVTGANKRDVVEKLYQENGK
                     TSFEPADLKAHRMVNVILDKEAAAGLPEDVKAYFTSRFA"
     gene            7233..7385
                     /locus_tag="O6Y56_001156"
     CDS             7233..7385
                     /locus_tag="O6Y56_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574414.1"
                     /translation="MSKDKDPKLNYHEEENSMVTDFEDLKELGKEMEQISDQNDQEKN
                     SEEDSQ"
     gene            8048..8443
                     /locus_tag="O6Y56_001157"
     CDS             8048..8443
                     /locus_tag="O6Y56_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574415.1"
                     /translation="MLGKYWIQLLIATVIISLISIKAFPLAIGALYLPVIFKVIKLQL
                     NLSKGLIDDVNAQTFIKSNQSGIVISVICCLLITGILYYTLDGFYASLTGVLGTLIAL
                     NPYTTIVSAVLYILTAIATVEATKTKYRN"
     gene            8639..10024
                     /gene="fumC"
                     /locus_tag="O6Y56_001158"
     CDS             8639..10024
                     /gene="fumC"
                     /locus_tag="O6Y56_001158"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000116229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDB5574416.1"
                     /translation="MSVRIEHDTFGEIEVPADKYWGAQTERSKRNFPVGKERMPIEVV
                     YGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSN
                     MNVNEVVSYVANMYLKDHQSDESIHPNDDVNKSQSSNDTFPTAMHVALYQEVETKLEP
                     ALKLLRNTLKEKEDKFDSIIKIGRTHLQDATPIKLGQEISGWRYMLDRCETMLSESKK
                     HILNLAIGGTAVGTGINAHPEFGDKVAHYISENTGYPFVSSENKFHALTAHDEVVHLH
                     GTLKALAGDLTKIANDVRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMV
                     AVQVMGNDTVVGFASSQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPI
                     EENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEA
                     WIKPEDMVDPH"
     gene            complement(10489..11310)
                     /locus_tag="O6Y56_001159"
     CDS             complement(10489..11310)
                     /locus_tag="O6Y56_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDB5574417.1"
                     /translation="MKFKIPENFNDLSLRDIFQQLKVPKKDLHHLNMSKDITINDKPA
                     RLMDKVYTGDDVFVPTIDEKSNYVPSYRYAQIKYEDDDMAIVMKPKGVKTHPNDLKES
                     NTLMNHVIYTVDSDYVEPIHRLDQETVGLLIVAKNPLMKKILDRMLEDNDITRIYKAN
                     VKALLPLKPQTIDMPIGKDKFHSNKRRVSPTGQRAITHILTSKMIKETVCQLEIKLDT
                     GRTHQIRVHLAEIGHPVIGDPLYGDSTLRQLELESYKIEFVHPLTKEVISVSLDD"
     gene            11473..12585
                     /locus_tag="O6Y56_001160"
     CDS             11473..12585
                     /locus_tag="O6Y56_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HDB5574418.1"
                     /translation="MEQRTRLALLKEIAEFLNEETEMYSMTQGALKYLIEGSNFTTGW
                     IFFINSVGEHELVSHVALPQSLTADHCHYIKDGSCWCVKAFNQRRLMKASNIVNCSRI
                     NLASKAFPSQNDNITHHATVPLKSGQEQFGILNVASPNTEIYSDEDLELLESVAFQLG
                     SAIKRIYLTDREKEAAKINERNRLARDLHDSVNQMLFSVKLTAHAAYGMSNESIAKQA
                     FKTIEETSQNAVNEMRALIWQLKPVGLEQGLIHALTAYSKLMHIQLNVNVEGLIDLSN
                     EIEENIYRALQECINNVKKHADTNKMDLTLKQMNDILYIDVIDYGQGFEIDNVQIASS
                     HGINNIKQRVKLLRGKVTFHSQPTKGTQIQFTIPIK"
     gene            12607..13230
                     /locus_tag="O6Y56_001161"
     CDS             12607..13230
                     /locus_tag="O6Y56_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDB5574419.1"
                     /translation="MNKVILVDDHYIVRQGLRFLLSTIENIEVLQDFADGETFLEYLK
                     EHEHPDIVLLDLVMPGMNGIEITEYIKAHYPDIKVLVLTSYVDDEHVISAINKGADGY
                     EMKDVEPQQLIETIRRVMNGEKMIHPKAQDVFETVSQKPHYTNKLSKREIEVLREMVK
                     GKTNKEIAETLFVSEKTIKTHVSHIFSKLQVSDRTQAAIYAMENKLI"
     gene            13586..14050
                     /locus_tag="O6Y56_001162"
     CDS             13586..14050
                     /locus_tag="O6Y56_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDB5574420.1"
                     /translation="MDRQSFTDLIQTKFKMVRIEAGYTQDTMAQTIGLSKKTLVQIEK
                     ERVLPNWTTCISICALFRDSEVLNSTFGCDPLEIVQTISRNHCAYPNHAPTSDIYWNN
                     IETRNGYILQSNKVSNIYRVLNPDNQPIFGTSKMREAETYFNRNAKEELVHI"
     gene            14229..15353
                     /locus_tag="O6Y56_001163"
     CDS             14229..15353
                     /locus_tag="O6Y56_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HDB5574421.1"
                     /translation="MNALFIIIFMIVVGAIIGGITNVIAIRMLFHPFKPYYIFKFRVP
                     FTPGLIPKRREEIATKIGQVIEEHLLTETLINEKLKSEQSQQAIESMIQQQLQKLTKD
                     QLSIKQITSQIDIDLEQVLQTNGNQYIESQLNNYYTKHQNQTIASLLPNQLVTFLDQH
                     VDNATDLLCDRARNYLSSAKGTQDINDMLDTFFNEKGKLIGMLQMFMTKESIADRIQQ
                     ELIRLTSHPKARTIVTSLITNEYQTFKDKPLNELLDASQFNEIAENLSVYVTTYASKQ
                     ANKPVVTLMPQFVDYLEGQLSSKLANLIIEQLSIHLSTIMKKVDLRGLIEEQINTFDL
                     DYIEKLIIEIANKELKLIMSLGFILGGIIGFFQGLVAIFV"
     gene            15422..15766
                     /locus_tag="O6Y56_001164"
     CDS             15422..15766
                     /locus_tag="O6Y56_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002498160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF/YmcA family competence regulator"
                     /protein_id="HDB5574422.1"
                     /translation="MAVNLYDYANQLEQALRESEEYKAIKEAFANVKANEESKKLFDE
                     FRETQINFQQKQMQGEEIAEEDLQKAQEQAQAIEKDENISALMNAEQKMSQVFQEINQ
                     IIVKPLDEIYAD"
     gene            16700..17896
                     /locus_tag="O6Y56_001165"
     CDS             16700..17896
                     /locus_tag="O6Y56_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="HDB5574423.1"
                     /translation="MVKFIHCSDLHLDSPFKSKSHISPKIFEDVQKSAYESFKNIVDI
                     ALQQDVDFVIIAGDLFDSENRTLRAEIFLKQQFERLQNEQIFVYVCHGNHDPLSSKIS
                     SNWPDNVSVFSNKVETYEAITKSGETIYIHGFSYENRASYENKIDEYPSSQGQKGIHI
                     GVLHGTYSKSSVNERYTEFILEDLNSKLYHYWALGHIHERQQLSDMPVINYSGNIQGR
                     HFNEQGEKGCLLIEGDHLKLKTKFYPTQYIRFEEATIETDKTSKQGLYEVIQNFKQQV
                     REEGKAFYRLTLVINSETLISPQDLLQVEEMITDYEENENQFVYIDELKIQYAQNDES
                     PLVNEFSAELLVDQTVFDKAMSDLYLNPRASKFLDDYGTFDHTALVNRAEEILKAEMR
                     GEQNDN"
     gene            17886..20822
                     /locus_tag="O6Y56_001166"
     CDS             17886..20822
                     /locus_tag="O6Y56_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDB5574424.1"
                     /translation="MIIKSLEIYGYGQFVQRKIEFNKNFTEIFGENEAGKSTIQAFIH
                     SILFGFPTKKSKEPRLEPRLGNQYGGKLVLILDDGLEIEVERIKGSAQGDVKVYLPNG
                     AVRDDAWLQKKLNYISKKTYQGIFSFDVLGLQDIHRNLNEKQLQDYLLQAGALGSTEF
                     TSMREVINRKKDELYKKSGKNPIINQQIEQLKQLESQIREEEAKLETYHRLVDDRDKS
                     SRRLENLKHNLNQLSKMHEEKQKEVALHDHSQEWKSLEQQLNIEPITFPEKGVDRYEK
                     ARAHKQSLERDIGLRNERLAQLKEEATQLEPVKQSDIDAFISLNQQENEIKNKEFELT
                     AIEKDIANKQRDKDELQANIGWSETHHDVDSSEAMKSYVSEQIKNKQEQAAYIKQLER
                     SLEENKIEDNAVHSELDSVEEKIVPEETFEKKKEYSQQVIELNEKENLYSKLKERFEI
                     EQQEKQKRQKLLRTTFILLTLVGIGLTAFSFISNNMLFGIIFAVLTLVFVIGIIMSKS
                     KEVDYSEAITDEIEEIKAQLAILDENYDLDFDLDEQYRIRDHWQQALKNKDILEEKRQ
                     YIEGRLNDAKGRHDELQSTVENVKDELYLSSKISNDLIVDSISTMANIKALDQHISDL
                     NQQRQQLVQELDTFYNHAEAVTKSQFVYFNKLSLFHDVQQWLKSAEDTNEKWRINAEN
                     TKLVTNELNHLNAQLEENNKEITALFDFISVGTEEDFYQHHEDYQTYTSNLSRFNDLT
                     KYLENQNYSYELSSSLSEKTTAQLEEEDHLLATQVDEYNEQYLEMQAQVSDLSAQINH
                     METDTTLANLRHEYHSLKNQLNDIAKDWASLSYLQSLVDEHIKQIKDKRLPQVINEAV
                     EILKHLTDGRYTMINYNEDSITVKHVNGQLYDPVELSQSTKELLYVALRISLIKVLRP
                     YYPFPLIVDDAFVHFDKKRTEKMLNYLRSLSEHYQVLYFTCVKDNIVPSKEVITLNKI
                     EEGGKR"
     gene            20819..21760
                     /gene="yhaM"
                     /locus_tag="O6Y56_001167"
     CDS             20819..21760
                     /gene="yhaM"
                     /locus_tag="O6Y56_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease YhaM"
                     /protein_id="HDB5574425.1"
                     /translation="MRNIENLNPGDSVDHFFLVHKATQGVTAQGKDYMTLHLQDKSGE
                     IEAKFWTATKNDMATIKPEEIVHVKGDIINYRGNKQMKVNQIRLATTEDQLKTEQFVD
                     GAPLSPAEIQEEISHYLLDIENANLQRITRHLLKKYQERFYTYPAASSHHHNFASGLS
                     YHVLTMLRIAKSICDIYPLLNKSLLYSGIILHDIGKVRELSGPVATSYTVEGNLLGHI
                     SIASDEVVEAARELNIEGEEIMLLRHMILSHHGKLEYGSPKLPYLKEAEILCYIDNID
                     ARMNMFEKAYKKTDKGQFTDKIFGLENRRFYNPESLD"
     gene            complement(21881..22843)
                     /locus_tag="O6Y56_001168"
     CDS             complement(21881..22843)
                     /locus_tag="O6Y56_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDB5574426.1"
                     /translation="MKMINKLIVPVTASALLLGACGASATDSKENTLISSKAGDVTVA
                     DTMKKIGKDQIANASFTEMLNKILADKYKNKVNDKKIDEQIEKMQKQYGGKDKFEKAL
                     QQQGLTADKYKENLRTAAYHKELLSDKIKISDSEIKEDSKKASHILIKVKSKKSDKEG
                     LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKDSMDTGSAKKDGELGYVLKGQTDKDFEK
                     ALFKLKDGEVSDVVKSSFGYHIIKADKPTDFNSEKQSLKEKLVDQKVQKNPKLLTDAY
                     KDLLKEYDVDFKDRDIKSVVEDKILNPEKLKQGGAQGGQSGMSQ"
BASE COUNT         8334 a         3287 c         4092 g         7390 t
ORIGIN      
        1 ttattatttt taataggggc atagttcaac ggtagaatag aggtctccaa aacctttggt
       61 gtgggttcga ttcctactgc ccctgccatg gcggctgtgg tgaagtggtt aacacatcgg
      121 attgtggttc cgacattcga gggttcgatc cccttcagcc gcccctatta ttaatgggct
      181 atagccaagc ggtaaggcaa cggactttga ctccgtcact cgttggttcg aatccagcta
      241 gcccagttat tggcggcata gccaagtggt aaggcagagg tctgcaaaac ctttatcacc
      301 ggttcaaatc cggttgccgc ctccaggttt atgcgggagt agttcaactt ttagaacacg
      361 ttccttcccg gaacgaggta taggtgcaaa tcctatcttc cgctccataa tttaataata
      421 atgcgggagt atttcaactc ttagaataca ttccttcctg gaatgaggta taggtgtaaa
      481 tcctatcttc cgctccataa tttaatattt gcgggagtag ttcaactttt agaacacgtt
      541 ccttcccgga acgaggtata ggtgtaaatc ctatcttccg ctccataatt gcttccaaag
      601 ggaagttttt tgtttaccat taagccggtg tggcggaatt ggcagacgcg cgggactcaa
      661 aatcccgttc cacttgtgga gtgtcggttc gaccccgacc accggtataa ttaactgtta
      721 tttacataac ataacctact agaaaccttg taaaataagg tttcttttta ttttagctct
      781 atgtcaaatt gtaatgatgc gttcaatata ggaagttaag caactataca ttgtttaact
      841 tctttttttg atattacatt aatgattatg actatattat ctggggttat gtatttgttt
      901 caacttttct aataaaatat ttgtaaaagt gctattttat tctgctttat accaagtcga
      961 ttcaatttat ctatcttaat agtaatatga ctattttaat atttacaatt tattacatta
     1021 ttagtcacag gatgtaatta atagtatttt aaaattaaca tgacattgat tagtgagtag
     1081 attgttcaaa tttactttat tccttttgtg gattgttata tttagattaa attagccaac
     1141 taatcattgt taaagttaat tttctataat atgatgagtt taatgttcaa attggaggtc
     1201 gtttatgagt aacgcaaaga atgctgataa taaacagttt ttcagtaaga ttttaaattc
     1261 tattggtgct ggtgttgtta ttgcacttgt tccgaatgct ttattaggtg aagtattaaa
     1321 aatatttaaa agtgacaatg aaattttaga attaacgtat cagttagtga tactaattca
     1381 atcatttatg gcatttatta ttggggtttt agctgctcat caatttaaat ttaatggcgc
     1441 aggtgctgct atagtaggta catcagctat gattggttca ggtgctgttg tatatagcaa
     1501 taatagtttt atgttaaaag gtataggtga cattataaat acgagtttgg ttgttattat
     1561 tgcatgtctt atatatatgg tattacaaaa caaacttgga tcttttgaat taattatttt
     1621 accagtttta gtacctatcg ttagtggggg tatcggtcta atcacattac cttacattcg
     1681 aaaaattact caagcaattg gaaatgtaat tcattctttt acagacttaa atccgttgtt
     1741 aatgtctata cttattagtg tggcattttc attattaatg gtaacaccaa tatcgttagt
     1801 agcgattgca actgcgatta gtttaaacgg gctaggaagt ggagcagcaa acctaggtat
     1861 agtggctgcc tgtgttactt tcttatttgg ctcattgcgt gtcaattcta ttggtgtaaa
     1921 tgcagtttta ctcataggag ctgcaaaaat gatgatccca gtttacttga aaaatttaat
     1981 tatttcgata ccattgacta taaatggaat aattacggga atcattgctt acgttcttca
     2041 agttaaagga acaccattgt ctgctggatt tggatataca ggattagttg gcccaataaa
     2101 tgcatttaac cgaatgtcag gtgatccaac aatgaatatt attttattag ctcttggtta
     2161 ttttgtcata ccatttgtat cggcgtttat tgttcatgaa ttgtgtaaaa aattcattcc
     2221 tatatattcc aatgatattt ataaatttga agttccaaaa caataattta tagcttgatg
     2281 acaagaataa tttttaatat atgataaata taggcgttac tgtcaataag atattgatag
     2341 tagcgctttt tttgattgat tttaaaatgt aagaattgtt cgcgtataat aggcgatttt
     2401 ttaagtaaag gtttttaaaa agaagccttt ctctgtattg ataaaaatac atttataaaa
     2461 cactattgca tcaaaatgta ttaatatgta taattatgaa tattaattag ggagggctgt
     2521 ataaatgaag tgtttaatta ggtttatatt agtattaggg ttgttaatta gcagtgctat
     2581 ggtgtatatc aatcccacag cacatgctga acaagatcaa acatgggaga agattaaaga
     2641 acgcggtgaa cttagagtgg gtctttctgc agattatgca ccaatggaat ttgagcatac
     2701 agttaatggt aagactgagt atgcaggtgt agatattgat ttagctaaaa aaattgcgaa
     2761 agataataat ttaaaattaa aaatcgtcaa tatgtcattt gatagtttgt taggagctct
     2821 taaaactgga aaaattgata ttattatttc cggaatgact tcaacgcctg aacgtaagaa
     2881 gcaagttgat ttttcagatt catatatgat gactaaaaat atcatgcttg taaagaaaga
     2941 taaagttaat gaatataaag atatcaaaga ctttaataat aaaaaagtag gggcacaaaa
     3001 gggaactgaa caagaaaaaa tcgctcaaac cgaaattgaa aatgcatcta ttacttcatt
     3061 aagccgttta ccagacgtta tattagctct gaaaagtgga aaggttgaag gtgctgtagt
     3121 tgaaaaacct gtagcagaag catatttaaa acaaaatcct aaattaggaa tttccaatgt
     3181 gaaatttaat gaagaagaaa aagatacagt gatagcagtg ccaaaagatt caccaaaatt
     3241 attgtcacaa attaataaaa cgattaaaga ggttaaagat aaaggattaa tcgataaata
     3301 tatgactaat gctgcaaatg cgatgaatga tgacagtggt tttatttcta agtatggtag
     3361 ttttttcttg aaaggaatta agattacaat attaatttca cttatcggtg ttgcattagg
     3421 ttctatttta ggtgcattcg ttgcgttaat gaaattaagt aaaataaaaa ttatttcatg
     3481 gattgcctct atctatatcg aaatattaag aggaacacca atgttagttc aagtatttat
     3541 cgtattcttt ggtataactg ctgcattagg actagatatt tcagctcttg tttgtggaac
     3601 aattgcatta gttattaatt cctcagctta cattgctgaa attattcgtg caggtataaa
     3661 tgctgttgat aaaggccaaa tggaagccgc acgtagtcta ggtttgaatt atagacaaac
     3721 gatgaaaagt gtaattatgc cacaagcaat aaaaaacatt ttaccagctt taggtaatga
     3781 atttgtcact ttaattaaag aatcatctat tgtgtcaaca attggagttg gcgaaattat
     3841 gtttaatgca caagtggttc aaggtatttc atttgaccca ttcacaccat tactagtggc
     3901 agcagcatta tactttgtct taacatttgt acttacacgc attatgaaca tgattgaagg
     3961 gagattgaat gccagtgatt aaaataaaca atcttaataa agtttttgga gataatgaag
     4021 ttttaaaaga tatcaatctt gaaatcaatc aaggggaagt agtagcaata ataggtccat
     4081 ctggtagtgg taaaagtaca ttgttaagat gtatgaattt attagaagta cccactaaag
     4141 gtcaagtgat ttttgaaggc aatgacttaa cggaaaaagg gacacaagta gataaactac
     4201 gtcaaaaaat gggtatggta tttcaaaact tcaacctatt tccacataaa aaagttgtcg
     4261 ataatattat tttagctcct aaattattaa agaaagataa taacgatgaa ttgcataagg
     4321 aagcattgtc gttattagat aaagtgggat taaaagaaaa agcagatgta tatccgaatc
     4381 aattatcagg tggtcaaaaa caaagggtag caattgcaag agctttagca atgcatccag
     4441 atgttatttt attcgatgaa ccaacttcag cattagatcc tgaggtagtt ggtgatgtat
     4501 taaaagtaat gaaagaccta gccaaagaag gtatgaccat ggtggttgtg acacatgaaa
     4561 tgggatttgc caaagatgta agtgataaag tcatatttat ggcagatggc gttgtcgtag
     4621 agtcaggcac accagtcgaa atatttgaac aaccgcaaca tgaaagaaca caaaatttct
     4681 tagcaagagt attataacaa cctaacgaag cttgaatata tgatgcgcac cacaaagtta
     4741 tatcatatat tcaagctttt tattattaaa attatgtgaa atgaaacctc aatatgaata
     4801 atggttgtgt taaaataaca tagtattatt ttatgggggg catacgattg gatacaaagc
     4861 agttaaagca agatatcatt gactatgcat atacaattgg tatcgacagt attggattta
     4921 ctactgccga tccctttgat gaattgaagc aaaagctaga agcatatcat gcaaatggtt
     4981 atgcctcagg atttgaagaa tctgatattg ctttacgaac ggagcctaaa ttatccttac
     5041 caacagcaag gtcaatcata gcaattgcag ttggttatcc taacaaactg aaaggtgcac
     5101 ctaagagtgt tagaggtgat cgcagaggct tatttgctag agcatcgtgg ggtcaagatt
     5161 atcatacaat tatgcgtaaa cgattagaca tgttagctgc atttattgaa tctaaagttc
     5221 cagatgttga aatcaaatct atggtagata cgggtgtatt atcagatagg gcagtagcag
     5281 aacgtgcagg tttaggattt gttggtcgta atggctttgt catcaatcct aaactaggaa
     5341 catggacata cctcggtgaa atgttagtca gtataccttt tgaacctgat gatccattat
     5401 tagatagctg tggtgattgt acaatttgtg ttgatcgttg tccaacaagt gcattagttg
     5461 gaaatggcca attaaatagt cagaaatgca ttagtttttt aacgcaaaca aaaggctata
     5521 tgcctgacca atatcgttat aaaattggga atagattata tggttgcgat acgtgtcaac
     5581 aagtttgccc gaaaaataga ggtattaata ccgaacaagc tgacatcatt ttggaaccag
     5641 aaattttaaa gccaagatta gtacctttac tacgtatgtc taataaagaa ttcaaacaaa
     5701 catatggtca ccttgcaggt gcttggcgtg gtaaaaagcc gatacaacga aatgctattt
     5761 tagcattggc gcattttaat gaagtggatg caattccaga attgaaaaaa gttgcaacaa
     5821 cagatgaaag accgatgatt cgagcaactg cttattgggc tattggtcaa attcttgggg
     5881 aagaagcaag agattttatc aatgcaaatt ataatcaaga ggatgcagaa gttcagaatg
     5941 aaatgataaa aggattggac acaaggagag aatagtaata tgacaaatca tatcgtttta
     6001 tatcaaccag aaatcccagc taatactggt aacattgcac gtacgtgtgc aggtacaaac
     6061 acacatttac atttaattaa acctcttgga tttagaactg atgataaaat gttaaaaaga
     6121 gccggtttag attattggga atttgtgaat attacgtatc atgatagtat tgaagcattt
     6181 tttgaagcca caaatggcga gtattactta ttaacaaaat ttggtaaaaa gacttatagt
     6241 gattttgatt tttcaaatca tgacaaagat ttttacttca tttttggaaa agaaacgaca
     6301 ggattaccag actgggtgaa agagaaatat caagacacag cgttaagaat tcctatgagt
     6361 gaacatattc gttcattaaa tttatcaaat actgctgcgt tgttaattta tgaagcgtta
     6421 cgtcaacaag attttccagg attgaattaa aatttactca ttttcattat aaaaatgata
     6481 cttaagtgct atatttagag tataagcatg ttaaagttaa atggtttgat aaattgaaag
     6541 ttagggtata ataattatta atatcgccgt ttttatgtaa aatgcaaact aagaggagtg
     6601 tagaaatcat ggcaatgaac tttaaagtct ttgacaatag tcaacttgta gcagaatatg
     6661 ctgctgatat tattagaaag caatttaaca ataatcctac tacaattgca ggttttcatt
     6721 tagatactga tcaagcgcca gtactagatg aattaaagaa aaatattgaa aagcatgctg
     6781 ttgattttag ccaaataaat attttagatt atgacgataa aaaatcatat ttcgaagcgt
     6841 taggtgtacc agcaggtcaa gtttatccaa ttgcttatga aaaagatgca atcgaattaa
     6901 tcgctgataa gattaaaact aaagaaaata aagggaaatt aacattacaa gttgtttcta
     6961 ttgatgagca aggtaagtta aatgttagta ttcgtcaagg actaatggaa gcaagagaaa
     7021 ttttcatagt agtgactggt gctaataaac gagatgtagt tgaaaaatta tatcaagaaa
     7081 atggtaaaac aagcttcgaa ccagccgatt taaaagcaca tagaatggta aatgttattc
     7141 ttgataaaga agcggctgca ggtttacctg aagatgttaa agcttacttt acgtcacgct
     7201 ttgcttaatt aaaaatctgt gaggtattga ttatgtctaa agacaaagat ccaaaattaa
     7261 attatcatga agaagaaaac agtatggtaa cggattttga agatttaaaa gaattaggta
     7321 aagaaatgga acaaatttct gatcaaaatg atcaagaaaa gaattctgaa gaagacagtc
     7381 agtaaagtat tataattgtg taatatacag ctatttatca tgtaatcaat gaatagtata
     7441 gaacctatat caaataggat tgataatctt gaatatgaag ttaggtagca ttttgttacc
     7501 tagctctttt attatattca tagaagctga ctttccacca gcttctgagt ttgtggcccg
     7561 tttccccaaa tttgcaatgt ctgtagaaat tagaaatccg atttcactat gttggggtcc
     7621 cgccaacttg catcgtctgt agaaattaga aatccaattt cgctgtgttg ggcccgtttc
     7681 cccaaatttg catcgtctgt agaaattggg aatccaattc cactatgttg gaaccccgcc
     7741 aacttgcatg aaatagtaag ctgacatacc gaagcttcta tgttgaggcc cgcagtcaac
     7801 tactgccaat ataactttgt aaagcataaa acattgattt gtgtaccaga catagtaata
     7861 tatcaaaaat tcaattttaa atattaaaac aacatttaaa cggaattgat aattaaatac
     7921 cccagacata attgaaagaa gtcatctatc attaatattt ttaatgaaat cattaaaccg
     7981 cgtttcttaa tatgtcaaga ttatgatatg ctattgaaga atgaaattag aggagattta
     8041 tatatttatg ttaggaaaat actggattca attattgata gcaacagtta ttataagttt
     8101 aatatcaatt aaagcttttc cattggcaat tggggcatta tatttacctg ttattttcaa
     8161 agtaattaaa ttacaactca atttatcaaa aggattaatc gatgatgtta atgcgcaaac
     8221 attcattaaa agtaatcaat caggtattgt aataagtgta atttgttgtt tattaataac
     8281 aggaatattg tattatacac ttgatgggtt ttatgcgagt ttaacaggag ttttaggtac
     8341 gcttattgct ctaaatccat atacgacaat tgttagtgct gtattatata tacttacagc
     8401 tattgctacg gttgaagcta ctaaaacaaa gtatcgcaat taaacttagt tcaacaataa
     8461 ctaaataatg atagataaca cactaatcgt atgaccgtat cactgtaata aagggtgggc
     8521 acgtgcgatt agtgtatttt tatttcaaat tatgaaaacg ttttaatcat aaattgctca
     8581 attaaattaa ttaatgatat actacagtta aataaacagt gataagggga gaaattgaat
     8641 gtcagtaaga attgaacatg atacttttgg agaaatagaa gtacctgcag ataaatattg
     8701 gggtgctcaa acagaaagaa gtaaacgcaa tttcccagtt ggtaaagagc gtatgccaat
     8761 cgaagtagtt tatggttttg cacaactaaa gcgtgcagca gcattagcta attttgattt
     8821 aggaaaatta agcgaggcaa agaaagatgc cattgtatac gcatgtgatc aaattttatc
     8881 aggtgaatta gatgaacact ttccactagt tgtatggcaa acaggaagcg gtacacaaag
     8941 taatatgaat gtgaacgaag tagtaagtta tgttgctaat atgtatttaa aagatcatca
     9001 aagtgatgaa agtatccacc caaatgatga tgtaaataaa tcacaaagtt cgaatgatac
     9061 attcccaact gctatgcacg ttgcattata tcaagaagtt gaaacaaaat tagaacctgc
     9121 attaaaactt ttaagaaata ctttgaaaga aaaagaagat aaatttgatt caattattaa
     9181 aattggtcgt acacatttac aagatgcaac gccgatcaaa ctaggacaag agattagtgg
     9241 ctggcgttat atgcttgacc gatgcgaaac aatgttatct gaatctaaga agcacatttt
     9301 aaatcttgcc atcggtggta cggctgttgg tactggtatt aatgcgcatc ctgaatttgg
     9361 tgataaagtg gcacattata tttcagaaaa tacgggttat ccatttgtat cttctgaaaa
     9421 taaattccat gcattaacag cacatgatga agtagtacat ctacatggaa cattgaaggc
     9481 gctagcagga gacttaacga aaattgctaa tgatgtgaga tggttggctt cagggccacg
     9541 agctggtttg gcagaaattt ctatccctga aaatgaacca ggttcatcaa ttatgcctgg
     9601 taaagttaat cctacacaat gtgaaatgtt aacaatggtt gcagtccaag taatgggtaa
     9661 tgatacagtt gttggcttcg caagttcaca aggtaacttt gaattgaatg tttataaacc
     9721 agttattatg cataatacac tacaatcaat ttacctttta gctgacggta tggaaacatt
     9781 taataacaat tgtgcagtgg gcattgaacc aatcgaagag aatattgata attatttaaa
     9841 tcaatcatta atgttagtta ctgcattaaa tccacatatt ggttatgaaa aagctgctca
     9901 aattgctaag aaagcccata aagaaggttt aactttaaaa gaatctgcaa ttcaaactgg
     9961 atatgttaca gaagaacaat ttgaagcatg gattaaacca gaagatatgg tagatcctca
    10021 ttaattaaat attaatataa aataaagttt gggcattaca ggtagatgta gtgttcaagc
    10081 tttatttttt tgtctatgtc aaatcgaact tataagtccg atttgatata gggccatgaa
    10141 aggaaaaact tttcatggag tccgttttat tatagaacct attttttata tgatgaattg
    10201 ttgtacatgt attggccaaa caacctgtga taaaaatctt atgatgtcat gtattgtcca
    10261 tagatacacg taatgcacat gaaaaagact gcaagtcatt atccaaggat gctataaaat
    10321 gaaaaattac taaaatatca aaatataaaa tcctaagcat cgtaaaaaac ataaaaaaac
    10381 cgaacatctg aaaaaattaa taattttcca tctatccgat ttaagttgat acttgattta
    10441 gttacaatgc ggtattgcat gtttaaatat catgcaaaac taatcaaatt agtcatccaa
    10501 agaaacggaa atgacttcct tagtcaaggg atgcacaaac tctattttgt aactttcaag
    10561 ttctaattgt cttaacgttg aatcaccgta taaaggatca ccaataactg gatgaccaat
    10621 ttcagctaaa tgcacacgaa tttgatgagt acgtccagta tccaacttga tttcaagttg
    10681 gcacacagtt tcttttatca tttttgaagt taaaatgtgt gtaattgcac gctgtccagt
    10741 aggagacaca cgtcgtttat tcgaatggaa tttatcttta ccaattggca tatcaatcgt
    10801 ttgtggtttt aaaggtaaaa gtgccttaac atttgctttg tatatccgcg taatatcatt
    10861 gtcttctaac atgcgatcaa gaattttttt cattaaagga tttttagcaa caattaataa
    10921 tcctactgtt tcctggtcca gtcgatgaat tggttcgaca tagtcactat caaccgtgta
    10981 aatcacatga ttcattaaag tattgctttc ttttaaatca ttagggtggg tcttaacacc
    11041 tttaggtttc attacgattg ccatatcatc gtcttcgtat ttaatttgtg cataacgata
    11101 acttggaaca taattacttt tttcatcgat ggttggaaca aatacatcgt cgccagtata
    11161 cactttatcc attaatcgcg caggtttatc attaatagta atatctttag acatatttaa
    11221 atggtgtaaa tcttttttag gtaccttaag ttgttggaaa atatctcgta aacttaagtc
    11281 attaaagttt tctggtattt taaatttcat aaaatcctcc tatagtcttt aatatcatat
    11341 cacaaatcag ttctccgaaa tataactatt aagtaatcaa ggccatttta tcatgttcac
    11401 gtctaagatt taaaaatata ataactcaat gtataatagt taatacacgt aaaaatgaat
    11461 tggagcgatt tgatggaaca aaggacgcga ctagctttat taaaagagat tgccgaattt
    11521 ttaaacgaag aaactgaaat gtatagcatg acccaaggtg cgttaaaata tttaattgag
    11581 ggcagtaatt tcacgacagg ctggatattt ttcatcaata gcgtaggtga acatgaactt
    11641 gtatcacatg tggctttacc acaatctttg acagcagacc actgtcacta tattaaagat
    11701 gggtcttgtt ggtgtgtgaa agcatttaat caacgtaggc taatgaaagc gtcgaatatc
    11761 gtcaattgtt ctcgtattaa cttagcctct aaagcatttc ctagtcaaaa tgataatatt
    11821 acacatcatg caacggtacc acttaaatcg ggtcaagaac aattcggcat tttaaatgta
    11881 gcgtcaccaa atactgaaat atatagtgat gaagatttag agttgctaga gtctgtcgca
    11941 tttcaattag ggtcagccat caaacgtatt tatttaacag accgtgaaaa agaagcagca
    12001 aaaattaatg aacgtaatcg tttagctaga gatttacatg attcagtaaa tcaaatgtta
    12061 ttttctgtaa aactaacagc acatgctgcg tatggcatgt caaacgaatc catcgctaaa
    12121 caagcattca agacgattga ggaaacgagt caaaatgccg ttaatgaaat gcgtgcattg
    12181 atttggcaac ttaagccagt tggacttgag caaggcttaa ttcatgcttt gacagcatat
    12241 agtaaattaa tgcatataca attaaatgta aatgtagaag gtttaatcga tttatctaat
    12301 gaaatcgaag aaaacatata cagagcatta caagagtgta ttaataatgt taagaaacat
    12361 gctgatacga ataaaatgga tcttacatta aaacaaatga acgatatact atatattgac
    12421 gtgattgatt atggtcaagg atttgagatt gataatgttc agatagcttc atcacacggt
    12481 ataaataaca taaaacaaag agttaaatta ttaagaggta aagtgacctt tcattctcag
    12541 ccaacaaagg gtacacaaat acaattcaca attcctataa aatagcttga tttaaggaga
    12601 taacccatga acaaagtaat attagtagat gaccattata ttgtgcgaca aggattgcga
    12661 tttttattat ccacgattga aaacatagaa gttttacaag actttgccga tggagaaaca
    12721 tttttagaat atttaaaaga gcatgagcac cctgatattg tgctattaga tttagtgatg
    12781 cctggcatga atggtattga aattacggaa tatattaagg cacattatcc ggatattaaa
    12841 gttttggtat taacaagtta tgttgatgat gaacatgtaa tttcagcaat caataaaggt
    12901 gctgatggtt atgaaatgaa agacgttgag cctcagcaat taattgaaac tattagacga
    12961 gttatgaacg gtgaaaaaat gatacatcct aaggcacaag atgtattcga aacagttagc
    13021 caaaaaccac actacacgaa taagttgtca aagagagaaa ttgaagtgtt acgtgaaatg
    13081 gttaaaggta aaacaaataa agagatagca gaaactttat ttgtatctga aaaaacaatt
    13141 aaaacacatg tcagtcatat atttagtaaa ttacaagtta gcgatcgtac acaagcagca
    13201 atttatgcaa tggaaaataa gttgatttag aatgagcttt taaatatttg tcgaaaaata
    13261 gacaattttt aatctgattt tgatgaattt tttatagcga tagtgtttat tatacagttt
    13321 tctttgtaaa tttgatatca ttataaaagt gtaagtttta tcaaatctag tgattatgca
    13381 taaaatttta cttcatttac ttttgcttca ttataaagta aacttaactc ttgttgactt
    13441 gatcaaaatt taatacaaat gtgaaattga ctcttttcat tttattaaaa atatattaag
    13501 atgtaatctg tgtttcaaga aatgtgtatt attgcaattt cttgtgtccg gataaaattc
    13561 cccaaacaga aaggtagata acagaatgga tagacagagt tttacagatt taattcaaac
    13621 aaaatttaaa atggttcgta tagaggctgg ttatacgcaa gatactatgg cgcaaacaat
    13681 tggactttct aaaaagactt tagtacaaat cgaaaaagag agagtattac caaactggac
    13741 aacttgcatt tcaatttgtg cattatttag agactctgaa gtattaaaca gtacatttgg
    13801 ctgtgatcca ttagaaatcg ttcaaacaat ttcaagaaat cactgtgcat atccaaacca
    13861 tgcaccaaca agtgatattt attggaataa cattgagact cgtaatgggt acattttaca
    13921 aagtaacaaa gtaagcaata tttatcgtgt attaaatcca gataaccaac caattttcgg
    13981 tacttctaaa atgagagaag ctgaaacata ctttaacaga aatgctaaag aagaattagt
    14041 acatatctag gcctatatac ttttaataaa taataaaagc gatgtaacac acctgtttcg
    14101 agaggtgagg catcgctttt tgtatgtaaa ctaataataa attgagcaga aagtgaaatg
    14161 attaatgaat taaaaaataa aaatagtggt ataatgaata actatgttgt cacaaaggag
    14221 tcaaaattat gaatgcacta tttattatca tatttatgat tgtagtaggg gcgataattg
    14281 gtggcattac taatgtaatt gcaattagaa tgctgtttca cccctttaaa ccatactata
    14341 tatttaaatt tagagtccca tttacaccag gtttaatacc gaaaagacgc gaagaaattg
    14401 caactaaaat tggccaagtg attgaagagc atttgcttac agaaacttta attaatgaaa
    14461 aattaaaaag cgagcaatca cagcaagcaa tagaatctat gattcaacag cagttacaaa
    14521 agttgacgaa agatcaattg tcaattaaac aaattacttc tcaaatcgat attgatttag
    14581 aacaagtatt acaaactaat ggaaatcaat atattgaatc acaattgaat aattattata
    14641 caaagcatca aaaccaaaca atagcatctt tattgccaaa tcaacttgta acatttttag
    14701 atcagcatgt agataacgca acagacttat tatgtgatcg tgcaagaaat tatttatcat
    14761 ctgcaaaagg cacacaagat attaatgata tgttggatac ttttttcaat gagaaaggta
    14821 agttaattgg tatgttgcaa atgtttatga caaaagagag cattgcagat cgaattcaac
    14881 aagaacttat acgtttaaca tctcatccta aagcaagaac aattgtgaca tcgttaatta
    14941 ccaatgaata tcaaactttt aaagataaac cattgaatga actgttagat gcgtcgcagt
    15001 ttaatgaaat cgctgaaaat ctatcagtgt atgtaacaac atatgcaagc aaacaagcga
    15061 ataagccagt ggttacgtta atgcctcaat tcgttgatta tttagaaggt caactctcta
    15121 gcaaattagc aaatttaatc attgaacaat tatcgattca cttatctaca attatgaaaa
    15181 aagtggactt acgaggatta attgaagaac aaattaatac gtttgactta gattatattg
    15241 aaaaattaat tatagaaatt gctaacaaag aactaaagtt gattatgtca ttaggtttca
    15301 ttttaggtgg tattattgga tttttccaag gtttggttgc aatctttgtc taaaaaagcg
    15361 agatgtggta aagtaatatc gaacgtttta ataaacatca caacaaagga gtgctataac
    15421 catggcagta aatttatatg attatgcaaa tcaattagaa caagctttaa gagaaagcga
    15481 agaatacaaa gcaatcaaag aagcattcgc taatgtaaaa gctaacgaag aatctaaaaa
    15541 gttattcgac gagttccgtg aaactcaaat taacttccaa caaaaacaaa tgcaaggtga
    15601 agaaattgct gaagaagatt tacaaaaagc gcaagaacaa gcgcaagcaa ttgaaaaaga
    15661 tgaaaacatc tctgcattaa tgaatgctga acaaaaaatg agtcaagtat tccaagaaat
    15721 caaccaaatt atcgttaaac cattagacga aatttacgct gactaatatt aaaataatat
    15781 ttttcaatcc tttaaataga ggaatagact gccgacagag tccgagactt tgtgggtagt
    15841 ttttttagtt ttgataacag aagttagagg ttctctgtca aattgggcaa atgcgttcag
    15901 taccggaagt taggttatca aacatgtcct agctctagca aagaacggac gacggaagct
    15961 gggcaatcat acaatattgg ctctatgcca aaacgggcag atgagcttga taacggaagt
    16021 tagaggctct ctgtcaaatt gggcaaatgc gttcagtatc ggaagttagg ctagtaaacg
    16081 tgtcctaact tcctttttgc attttggagt gtaaagtttt caacataata ctattagttc
    16141 ggtcatgtat tggactgatg gaaaagtgtt tcacttttaa tggctcatta agaacggcct
    16201 gaaaatgttt ggcgtattaa gtgcaatgat agttttgaca tttagcttct aataggtcat
    16261 tactgccgag caaatctagt agagtaacca tgtaaatctt taatatgtca gttggttcac
    16321 tagcagtgtt aacaattact gaaattgcat ttccgactta aatttttgaa aaaaatcagc
    16381 gtacgctaca aataaaattt taaactgtta taaatgtgtc tcaatttcat atgttcatcg
    16441 acgatatgaa gcgtattatg gtaaaatgaa gaaataataa acttgttaat aaataaaaca
    16501 tcacgatttg actaaagcac tttattattg tgtagataat aattttttaa cgaaatacaa
    16561 ataaaaatgg cgactggttt taataaatca gctaatgaat cactacacct ataagaatga
    16621 atatagtgat tagaatgctt tgtatagttg gattttgcaa aattgatgtt agaaccttta
    16681 attaaggaga tatggatgta tggttaaatt tattcattgt tcggatttac atttagatag
    16741 tcctttcaaa tctaagagtc atataagccc taaaattttt gaggatgttc aaaaaagtgc
    16801 ttatgaaagt tttaaaaaca ttgtagatat tgcattacaa caagatgttg attttgtaat
    16861 tatcgcgggt gatttatttg atagtgaaaa cagaacatta cgtgctgaaa ttttcttaaa
    16921 acagcaattt gaacgtttac aaaatgaaca aatctttgtt tatgtttgtc atggtaatca
    16981 cgacccatta tcatcaaaga tttcatcaaa ctggccagat aatgtttctg tattttcaaa
    17041 taaagttgag acgtatgaag caattactaa atctggtgaa acaatttata ttcacggatt
    17101 tagttatgag aatagagcaa gttatgagaa caagattgat gaatatccat caagtcaagg
    17161 ccaaaaaggc atacatattg gtgtcttgca tggtacgtac agtaaatctt cagttaacga
    17221 aagatatacc gagttcattt tagaagattt aaacagtaaa ttgtatcatt attgggcttt
    17281 aggtcatata catgaacgtc aacaattaag tgatatgcct gtaattaact attcaggtaa
    17341 tattcaaggt agacatttta atgagcaagg tgaaaaaggt tgcttattaa tcgagggtga
    17401 ccacttaaaa ttaaaaacta aattttatcc tacacagtat attagatttg aagaagcaac
    17461 tattgaaacg gataagacat ctaagcaagg tttatacgag gtcattcaaa actttaaaca
    17521 acaagtgaga gaagaaggaa aagcctttta tcgtttaacg cttgttatta atagtgagac
    17581 attaatttca cctcaagatt tattacaagt tgaagaaatg attacagatt atgaagaaaa
    17641 cgaaaatcaa tttgtatata ttgatgagtt aaaaatacaa tatgcacaaa atgatgaatc
    17701 acctttagtt aatgaatttt cagcggaatt attagtcgat caaactgttt ttgataaagc
    17761 gatgtcagac ttatatttaa atccaagggc atctaagttc ctagacgatt atggaacatt
    17821 cgaccataca gcattagtta atcgtgctga agaaatatta aaagctgaaa tgagaggtga
    17881 acaaaatgat aattaaatca cttgaaattt atggttacgg tcaatttgtt caacgtaaaa
    17941 ttgaatttaa taaaaacttc actgaaattt ttggtgaaaa tgaagcgggt aaatcgacga
    18001 ttcaagcatt catccattcg atattatttg gttttccaac taaaaagtct aaagagccaa
    18061 gactagaacc acgtctaggt aaccaatacg gtggtaaatt agtacttatt cttgatgatg
    18121 gcttagagat tgaagttgaa cgaattaaag gcagtgctca aggtgatgtg aaagtatatt
    18181 tacctaatgg tgctgtgcgt gatgatgctt ggttacaaaa gaaacttaat tatatttcta
    18241 aaaagacata tcaaggtatc ttttcatttg atgtactagg gcttcaagac attcatagaa
    18301 atctaaatga aaaacaattg caagattatt tattacaagc aggggcttta ggatcaactg
    18361 aattcacgtc aatgcgcgaa gtgattaatc gtaaaaaaga tgaattatat aaaaaatcag
    18421 gtaaaaatcc aatcattaat caacaaattg agcaattaaa acaactagaa agtcaaattc
    18481 gtgaagaaga agctaaacta gaaacatatc atcgcttagt agatgatcga gataaatcat
    18541 cacgtcgatt agagaattta aagcataatt taaatcaatt atcaaaaatg catgaagaaa
    18601 aacaaaaaga ggttgcttta catgatcatt cacaagaatg gaagtctcta gaacaacagt
    18661 taaatattga gccaatcaca ttcccagaaa aaggtgtgga tcgttacgaa aaagcacgag
    18721 cgcataagca atcgttagaa agagatattg gtttaagaaa tgagcgttta gcccaactta
    18781 aagaagaagc gactcaatta gagccagtta aacaatctga tattgacgcc ttcattagtt
    18841 tgaatcaaca agaaaatgaa attaaaaata aagaatttga acttactgca atcgaaaagg
    18901 atattgcgaa taaacaacgt gataaagatg aattgcaagc aaatattggt tggtctgaaa
    18961 cgcatcatga cgtagatagc tctgaggcaa tgaaaagtta tgtcagtgag caaatcaaga
    19021 ataaacaaga acaagcggca tacattaagc aattagaacg tagtttagaa gaaaataaaa
    19081 tcgaagataa tgcggttcat agcgaactag attctgttga agaaaaaata gttcctgaag
    19141 agacttttga aaagaaaaaa gaatactcac aacaagtcat tgaattaaac gaaaaagaga
    19201 acttgtatag caaattgaaa gaacgtttcg aaattgagca acaagaaaaa caaaaacgtc
    19261 aaaaattgtt acgaacaacg tttattcttt taacattagt aggtattggt ttaactgcct
    19321 tctcatttat ttcaaacaac atgttgtttg gtattatttt cgcagtatta actttagttt
    19381 ttgttatcgg tatcatcatg tctaaatcaa aagaagtaga ttatagcgag gccatcacag
    19441 atgaaatcga agaaattaaa gcacaactag ccattttaga tgaaaactat gacttagatt
    19501 ttgatcttga tgagcaatat cgcattcgtg atcactggca acaagctttg aaaaataaag
    19561 atattttaga agagaaacgt cagtatattg aaggtcgttt aaatgatgcg aaagggcgtc
    19621 atgatgaatt gcaatcgaca gttgaaaacg ttaaggatga attatactta tcatctaaaa
    19681 tttcaaatga tttaattgtt gatagtattt ctacaatggc gaatattaaa gcattagatc
    19741 aacatatcag tgatttaaat caacaacgcc agcaattggt tcaagaatta gatacattct
    19801 acaatcatgc tgaagctgtt acaaaatcac aatttgttta tttcaacaaa ttatctttat
    19861 tccacgatgt gcaacaatgg ttgaaatcag ctgaagacac gaatgaaaaa tggcgtatta
    19921 atgctgaaaa taccaaactt gttacaaatg aattaaatca tttaaatgct caattagaag
    19981 aaaataataa agaaatcaca gcactattcg attttatcag tgttggtact gaagaagatt
    20041 tttaccaaca tcatgaagat taccaaactt atactagtaa tttgagtcgt tttaatgatt
    20101 taactaaata tcttgagaac caaaactatt cttatgaatt aagttctagt ttaagtgaaa
    20161 aaacaacagc acaacttgaa gaagaagatc atttattggc tactcaagtt gacgaatata
    20221 atgagcaata tcttgaaatg caagcacaag tcagtgattt aagtgcacaa atcaatcaca
    20281 tggaaactga tacaacactt gctaatttaa gacatgaata tcacagtctt aaaaatcaac
    20341 ttaatgatat tgcaaaagat tgggcaagtt taagttattt acaaagttta gttgatgaac
    20401 acattaaaca aattaaagat aaacgtttgc ctcaagttat taatgaagcg gtagaaatat
    20461 tgaagcattt aacagatggc agatatacga tgattaacta taatgaagat tcaattacgg
    20521 ttaaacatgt taatggtcaa ttatatgatc ctgttgaact aagtcaatct acaaaagaat
    20581 tactttatgt agctttacgt atcagtttaa ttaaggtact acgaccatat tatccgttcc
    20641 cattaattgt tgatgatgca tttgttcatt ttgataaaaa acgtactgaa aaaatgttga
    20701 attatttacg atcattatca gaacactatc aagtactata ctttacatgt gtaaaagata
    20761 atattgttcc atcaaaagaa gtgattacat taaacaaaat agaggaaggc gggaaacgat
    20821 gagaaatata gagaatctaa atcccggaga ttcagttgat cactttttct tagtgcataa
    20881 agctacacag ggtgtaacag cacaaggtaa agattatatg acattacatt tgcaagataa
    20941 aagtggtgaa attgaagcga aattttggac ggctacaaaa aatgatatgg caacaatcaa
    21001 gcctgaagaa attgtacatg ttaaaggtga catcataaac tatcgcggaa ataaacagat
    21061 gaaagtcaac caaattagac tagcgacaac tgaagatcaa ttaaaaacag aacaatttgt
    21121 agatggtgca cctttatcac cggcagaaat acaagaagag atttctcatt atttgctaga
    21181 tattgaaaat gctaatttac aacgtatcac acgtcattta ttgaaaaaat atcaagaacg
    21241 attttacaca tatccagctg ctagttctca tcatcataac tttgcgagtg gcttaagcta
    21301 tcatgtatta acgatgttac gtattgcaaa atcaatttgt gacatttatc cattgttaaa
    21361 caaaagtttg ttatatagtg gtattatttt gcatgatatt ggtaaagtta gagaattgag
    21421 tggtcctgtt gcgacgtcgt atacagtcga aggtaactta ttaggacaca tctcgattgc
    21481 gagtgatgaa gtagttgaag cagctcgtga attgaacatt gaaggagaag aaatcatgtt
    21541 gttaagacat atgattttat ctcatcatgg taagttagag tatggttcgc caaaactgcc
    21601 atacttaaaa gaagcagaaa ttttatgcta tatcgataat atcgatgcta gaatgaatat
    21661 gtttgaaaag gcttataaaa aaactgacaa gggtcagttt acagataaaa tatttggtct
    21721 tgaaaatcgt agattctaca atcctgaatc actcgattaa gaattaaaag atatcggaca
    21781 gatgagtata ctgaaacatg agctcatctg tccgattttt aatgcgaaaa aaccgagcgg
    21841 ccgtggtatg atttttgaac cacggtcgct cggttttgtg ttattggctc atgccggatt
    21901 gtccgccttg tgcgccacct tgtttaagtt tttcagggtt taagatttta tcttcgacaa
    21961 ctgatttaat atcacgatct ttaaagtcaa catcgtattc ttttaataga tctttgtatg
    22021 catcagttaa taattttgga tttttttgta ctttctgatc gactaatttt tctttcaggc
    22081 tttgtttttc actgttaaag tctgttggtt tatcagcttt aataatatga tatccaaagc
    22141 ttgatttaac aacgtctgat acttcaccat ctttaagttt aaatagtgct ttttcaaaat
    22201 ctttatcagt ttgtccttta agaacataac ctaattcgcc atctttttta gctgaaccag
    22261 tatccattga gtctttttta gcgatttcac caaatttact tggatctttt gaaacttctt
    22321 tttgaatttc ttcagctttt tgtttcgctt ctttatcatc taagccttct ttgtcgcttt
    22381 tcttagattt aactttaatt aaaatgtgtg aagctttctt gctgtcttct ttaatttcag
    22441 aatcagagat tttaatttta tctgatagta attctttatg ataagcagca gtacgtaaat
    22501 tttctttata tttatcggct gttaaacctt gctgttgaag ggccttttca aatttatctt
    22561 taccgccgta ttgcttttgc attttttcaa tttgttcgtc aatcttctta tcattaactt
    22621 tatttttata tttatcagct aaaattttat ttaacatttc agtaaatgat gcatttgcaa
    22681 tttgatcttt accgattttt ttcattgtat ctgcaactgt tacatctcca gctttagaag
    22741 aaattaatgt attttcttta gaatctgtgg cactagcgcc acaagcgcct aataatagag
    22801 cactagctgt taccggaacg attaatttgt ttatcatctt catagttgaa actcctttgt
    22861 aagttaatca tcgtgaatat aacatagttt tatattatca ccaatcaata acccatgaca
    22921 tcagactaga gcattaggtt taggggtagt aattgatgaa aataaaaaaa caaggtctat
    22981 atacatttga ttgtaagcta ttacatagcc taaaaacaaa taataacacc ttgctataat
    23041 tattttgtta taaatgatat ggatttttaa tttttttcaa aatattaata cctgtactat
    23101 gtt
//
LOCUS       DALMNS010000035        22036 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.035, whole genome shotgun sequence.
ACCESSION   DALMNS010000035 DALMNS010000000
VERSION     DALMNS010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 22036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22036
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.035"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            160..360
                     /locus_tag="O6Y56_001169"
     CDS             160..360
                     /locus_tag="O6Y56_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1514 family protein"
                     /protein_id="HDB5574427.1"
                     /translation="MWITMTIVFAILLLVCISINSDRAREIQALRYMNDYLLDEVVKT
                     KGYNGLEEYRIELKRMNNDIKK"
     gene            388..804
                     /locus_tag="O6Y56_001170"
     CDS             388..804
                     /locus_tag="O6Y56_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000590121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDB5574428.1"
                     /translation="MIKIEKHDIKKLEEYIQHIDNYRRELKMREYELLESHEPDNAGA
                     SKSNLPGNPIERCAIKKFSDNRYNTLRNIVNGVDRLIDESDEDTLELLRFRYWDCPIG
                     CYEWEDIAHYFGTSKTSILRRRNALIDKLAKYIGYV"
     gene            1036..1335
                     /locus_tag="O6Y56_001171"
     CDS             1036..1335
                     /locus_tag="O6Y56_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000988331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HDB5574429.1"
                     /translation="MMTKDERIRFYKSKEWQTTRKRVLERDNYECQQCKRDGKLTTYD
                     KSKRKSLDVDHILSLEHHPEFAHDLNNLETLCIKCHNKKEKRFIKKENKWKDEKW"
     gene            1466..1810
                     /locus_tag="O6Y56_001172"
     CDS             1466..1810
                     /locus_tag="O6Y56_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574430.1"
                     /translation="MEIIVDENLVLKEKERLQVLYKDIPSNKLKVVDGLIIQAARLRV
                     MLDYMWEDIKEKGDYDLFTQSEKAPPYERERPVAKLFNARDAAYQKIIKQLSDLLPEE
                     KEDTETPSDDYL"
     gene            1807..3468
                     /locus_tag="O6Y56_001173"
     CDS             1807..3468
                     /locus_tag="O6Y56_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016187779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HDB5574431.1"
                     /translation="MISNKYVDEYINLWKQGKIILNKERIDLFNYLQKHIYSRDDVYF
                     DEQKIEDCIKFIEKWYFPTLPFQRFIIANIFLIDKNTDEAFFTEFAIFMGRGGGKNGL
                     ISAISDFLSTPLHGVKEYHISIVANSEDQAKTSFDEIRTVLMDNKRNKTGKTPKAPYE
                     VSKAKIINRATKSVIRYNTSNTKTKDGGREGCVIFDEIHYFFGPEMVNVKRGGLGKKK
                     NRRTFYISTDGFVREGYIDAMKHKIASVLSGKVKNSRLFAFYCKLDDPKEVDDRQTWE
                     KANPMLHKPLSEYAKTLLSTIEEEYNDLPFNRSNKPEFMTKRMNLPEVDLEKVIAPWK
                     EILATNREIPNLDNQMCIGGLDFANIRDFASVGLLFRKNDDYIWLGHSFVRQGFLDDV
                     KLEPPIKEWEKMGLLTIVDDDVIEIEYIVDWFLKAREKYGLEKVIADNYRTDIVRRAF
                     EDAGIKLEVLRNPKAIHGLLAPRIDTMFAKHNVIYGDNPLMRWFTNNVAVKVKPDGNK
                     EYIKKDENRRKTDGFMAFVHALYRADDIVDKDMSKALDALMSIDF"
     gene            3484..4671
                     /locus_tag="O6Y56_001174"
     CDS             3484..4671
                     /locus_tag="O6Y56_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000025279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDB5574432.1"
                     /translation="MSILEKIFKTRKDITYMLDLDMIEDLSQQAYVKRLAIDSCIEFV
                     ARAVAQSHFKVLEGNRIQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVS
                     DSKELLIADSFYREEYALYDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVES
                     LFEDYGKIFGRMIGAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLA
                     IAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIYGETADLEK
                     NTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLV
                     SSGSFTRNEVRIMLGEEPSDNPELDEYLITKNYEKANSGENDEKEKDENTLKGGDEDE
                     SGD"
     gene            4655..5392
                     /locus_tag="O6Y56_001175"
     CDS             4655..5392
                     /locus_tag="O6Y56_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001607394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease ClpP"
                     /protein_id="HDB5574433.1"
                     /translation="MKVEIKGVIVSNEDKWVYEMLGMDSTCPKDVLTQLEFSDEDVDI
                     IINSNGGNLVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAGDHIEMSPVARMMI
                     HNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELVEMMARETWLNADEA
                     IEQGFADSKMFENDNMQIVASNTQVLSKDVLNRVTALVSKTPEVNIDIDAIANKVIEK
                     INMKEKESEIDVADSKVSANGFSRFLF"
     gene            5416..6561
                     /locus_tag="O6Y56_001176"
     CDS             5416..6561
                     /locus_tag="O6Y56_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001573791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HDB5574434.1"
                     /translation="MTINLSETFANAKNEFINAVNNGEPQERQNELYGDMINQLFEET
                     KLQAKAEAERVSSLPKSAQSLSANQRSFFMDINKNVNYKEEKLLPEETIDRIFEDLTT
                     NHPLLADLGIKNAGLRLKFLKSETSGVAVWGKIYGEIKGQLDAAFSEETAIQNKLTAF
                     VVLPKDLNDFGPAWIERFVRVQIEEAFAVALETAFLKGTGKDQPIGLNRQVQKGVSVT
                     EGAYPEKEEQGTLTFANPRATVNELMQVFKYHSTNEKGKSVAVKGNVTMVVNPSDAFE
                     VQAQYTHLNANGVYVTALPFNLNVIESTVQEAGKVLTYVKGLYDGYLAGGINVQKFKE
                     TLALDDMDLYTAKQFAYGKAKDNKVAAVWKLDLKGHKPALEGTEETL"
     gene            6581..6865
                     /locus_tag="O6Y56_001177"
     CDS             6581..6865
                     /locus_tag="O6Y56_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016170801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574435.1"
                     /translation="MVKFKVVRAFKDIEHNQHKYKVGELYPAEGYNNPRVELLTNQIK
                     NKYDKVYIVPLDKLTKQELLELCESLQKKASSSMVKSEIVDLLNGEDNDD"
     gene            6855..7139
                     /locus_tag="O6Y56_001178"
     CDS             6855..7139
                     /locus_tag="O6Y56_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009560502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head-tail adapter protein"
                     /protein_id="HDB5574436.1"
                     /translation="MTIDDLLVKFKSLEKIDHNSEDEYLKQLLKMSYERIKNQCGVFE
                     LENLIGQELILIRARYAYQDLLEHFNDNYRPEIIDFSLSLMEVSEDEESV"
     gene            7123..7485
                     /locus_tag="O6Y56_001179"
     CDS             7123..7485
                     /locus_tag="O6Y56_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000755150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail adaptor protein"
                     /protein_id="HDB5574437.1"
                     /translation="MKKVFKKPRITTKRLNTRVHFYKYTENNGPEAGEKEEKLLYSCW
                     ASIDGVWLRELEQAISNGTQNDIKLYIRDPQGDYLPSEEHYLEIESRYFKNRLNIKQV
                     SPDLDNKDFIMIRGGYSS"
     gene            7482..7886
                     /locus_tag="O6Y56_001180"
     CDS             7482..7886
                     /locus_tag="O6Y56_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000114224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDB5574438.1"
                     /translation="MSVKVIGDKALERELEKRFGIKEMVKVQDKALIAGAKVIVEEVK
                     KQLKPSKDTGALINEVSFSKPEWINGKRTITVHWRGSKDRYKIVHLIEYGHVQKETGK
                     FIKPKAMGGVNRAIRQGQNKYFETLKRELKKL"
     gene            7883..8290
                     /locus_tag="O6Y56_001181"
     CDS             7883..8290
                     /locus_tag="O6Y56_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000565496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574439.1"
                     /translation="MIDILYKVHEVISQDRIIREHVNINNIKFNKYPNVKDTDVPFIV
                     IDDIDDPIPTTYTDGDECAYSYIVQIDVFVKYNDEYNARIIRNKISNRIQKLLWSELK
                     MGNVSNGKPEYIEEFKTYRSSRVYEGIFYKEEN"
     gene            8291..8935
                     /locus_tag="O6Y56_001182"
     CDS             8291..8935
                     /locus_tag="O6Y56_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000268736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDB5574440.1"
                     /translation="MAVKHASAPKAYINITGLGFAKLTKEGAELKYSDITKTRGLQKI
                     GVETGGELKTAYADGGPIESGNTDGEGKISLQMHAFPKEIRKIVFNEDYDEDGVYEEK
                     QGKQNNYVAVWFRQERRDGTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALF
                     PLVDNKKSVRKYIFDSANMTNHGGDGEKGEEAFLKKILGEEYTGNVTEDNEETL"
     gene            8977..9201
                     /locus_tag="O6Y56_001183"
     CDS             8977..9201
                     /locus_tag="O6Y56_001183"
                     /inference="COORDINATES: protein motif:HMM:NF014427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HDB5574441.1"
                     /translation="MPDSIKTLKVGDTYDLNVVVEPSNQSKLLKYTTDQTNIVSINRD
                     GQVTAEAQGIATVKATVGNMSDTITINVEA"
     gene            9251..9601
                     /locus_tag="O6Y56_001184"
     CDS             9251..9601
                     /locus_tag="O6Y56_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574442.1"
                     /translation="MAKLKRNIIQLVEDPKANEIKLQTYLTPHFISFEIVYEAMDLID
                     DIEDENSTMKPREIADRLMDMVVKIYDNQFTVKDLKERMHAPDGMNALREQVIFITQG
                     QQTEETRNFIQNMK"
     gene            9652..9789
                     /locus_tag="O6Y56_001185"
     CDS             9652..9789
                     /locus_tag="O6Y56_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574443.1"
                     /translation="MMDLIENGKDANEVLKMPFHYVLSIYQNKNNDISEEKAEALIDA
                     F"
     gene            9846..14357
                     /locus_tag="O6Y56_001186"
     CDS             9846..14357
                     /locus_tag="O6Y56_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001799555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDB5574444.1"
                     /translation="MGERIKGLSIGLDLDAANLNRSFAEIKRNFKTLNSDLKLTGNNF
                     KYTEKSTDSYQQRIKELDGTIIGYKKNVDDLAKQYDKVSQEQGENSAEAQKLRQEYNK
                     QANELNYLERELQKTSAEFEEFKKAQVEAQRMAESGWGKTSKIFESMGPKLTKMGDGL
                     KSIGKGMMIGVTAPVLGIAAASGKAFAEVDKGLDTVTQATGATGGELKKLQNSFKDVY
                     GNFPADAETVGGVLGEVNTRLGFTGKELESATESFLKFSHITGSEGVQAVQLITRAMG
                     DAGIEADEYQSVLDMVAKAAQASGISVDTLADSITKYGAPMRAMGFEMKESIALFSQW
                     EKSGVNTEIAFSGLKKAISNWGKAGKNPREEFKKTLAEIEKTPDIASATSLAIEAFGA
                     KAGPDLADAIKGGRFSYQEFLKTIEDSQGTVNQTFKDSESGSERFKVAMNKLKLVGAD
                     VWTSIESAFAPVMEELIKKLSIAVDWFSNLSDGSKRSIVIFGGIAAAIGPVVFGLGAF
                     ISTIGNAVTVLAPLLAGIAKADGLISFLSTKVPILGTVFTALTGPIGIVLGVLAGLAV
                     AFTIAYKKSETFRNFVNGAIESVKQTFSNFIQFIQPFIDSVKNIFKQAISAIVDFAKD
                     IWSQINGFFNENGISIVQALQNICNFIKAIFEFIINFVIKPIMFAIWQVMQFIWPAVK
                     ALIVSTWENIKGVIQGALNIILGLIKFFSSLFTGDWRGVWDAIVMILKGVVQLIWNLI
                     QLWFVGKILGVVRYFGGLLKGLIAGIWDVIKSIFSKSLSAIWNATKSIFGFLFNSVKS
                     IFTNMKNWLSNTWSSIRTNTIGKAQSLFSGVKSKFTNLWNATKEIFSNLRNWMSNIWN
                     SIKDNTVGIASRLWSKVRGIFTNMRDGLQSIISKIKSHIGGMVDAIKKGLNKLIDGLN
                     WVGGKLGMDKIPKLHTGTEHTHTTTRLVKNGKIARDTFATVGDKGRGNGPNGFRNEMI
                     EFPNGKRVLTPNTDTTAYLPKGSKVYNGAQTYSMLNGTLPRFSIGTMWKDIKSGASSA
                     FNWTKDQIGKGTKWLGDKVGDVMDFIDNPGKLLNYVLQAFGVDFSSLTKGMGIAGDIT
                     KAAWSKIKKSAIKWLEDAFAESGDGGVLDMNKLRYLYGHTAAYTRETGRPFHEGLDFD
                     YIYEPVPSTINGRAQVMPFHNGGYGKWVKIVKGALEVIYAHLSKYKVKTGQQVRVGQT
                     VGISGNTGFSTGPHLHYEMRWNGRHRDPLPWLRKNNGGGKSTPGGNGAANARRAIKAA
                     QNILGGRYKASWITNEMMRVASRESNYTANAVNNWDSNARAGIPSRGMFQMIDPSFRA
                     YAKSGYNNPLNPTHQAISAMRYIVGKWVPRTGSWRAAFKRAGDYAYATGGKVFDGWYN
                     LGEDGHPEWIIPTDPARRNDAMKILHYAAAEVRGKKASKNKRPSQLSDLNGFDDPSLL
                     LKMIEQQQQQIALLLKIAQSNDVIADKDYQPIIDEYAFDKKVNASIEKRERQESTKVK
                     FRKGGIAIQ"
     gene            14354..15838
                     /locus_tag="O6Y56_001187"
     CDS             14354..15838
                     /locus_tag="O6Y56_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail family protein"
                     /protein_id="HDB5574445.1"
                     /translation="MIDTIKVNNKTIPWLYVERGFEIPSFNYVLKTENVDGRSGSIYK
                     GRRLESYSFDIPLVVRNDYLSHNGIKTHDDVLNELVKFFNYEEQVKLQFKSKDWYWNA
                     YFEGPIKLHKEFTIPVKFTIKVVLTDPYKYSVTGNKNTAISDQVSVVNSGTADTPLIV
                     EARAIKPSSYFMITKNDEDYFMVGDDEVTKEVKDYMPPVYHSEFRDFKGWTKMITEDI
                     PSNDLGGKVGGDFVISNLGEGYKATNFPDAKGWVGAGTKRGLPKAMTDFQITYKCIVE
                     QKGKGAGRTAQHIYDSDGKLLASIGYENKYHDRKIGHIVVTLYNQKGDPKKIYDYQNK
                     PIMYNLDRIVVYMRLRRVGNKFSIKTWKFDHIKDPDRRKPIDMDEKEWIDGGKFYQRP
                     ASIIAIYSAKYNGYKWMEMNGLGSFNTEILPKPKGARDVIIQKGDLVKIDMQAKSVVI
                     NEEPMLSEKSFGSNYFNVDSGYSELIIQPENVFDTTVKWQDRYL"
     gene            15854..19639
                     /locus_tag="O6Y56_001188"
     CDS             15854..19639
                     /locus_tag="O6Y56_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574446.1"
                     /translation="MIHVLDFNDKIIDFLSTDDPSLVRAIHKRNVNDNSEMLELLISS
                     ERAEKFRERHRVIIRDSNKQWREFIINWVQDTMDGYTEIECIASYLADITTAKPYAPG
                     KFEKKTTSEALKDVLSDTGWEVSEQTEYDGLRTTSWTSYQTRYEVLKQLCTTYKMVLD
                     FYIELSSNTVKGRYVVLKKKNSLFKGKEIEYGKDLVGLTRKIDMSEIKTALIAVGPEN
                     DKGKRLELVVTDDEAQSQFNLPMRYIWGIYEPQSDDQNMNETRLSSLAKTELNKRKSA
                     VMSYEITSTDLEVTYPHEIISIGDTVRVKHRDFNPPLYVEAEVIAEEYNIISENSTYT
                     FGQPKEFKESELREEFNKRLNLIHQKLNDNISNINTIVKDVVDGELEYFERKIHKSDT
                     PPENPVNDTLWYDTSNPDVAVLRRYWNGRWIEATPNDVEKLGGITREKALFSELNNIF
                     INLSIQHASLLSEATELLNSEYLVDNDLKADLQASLDAVIDVYNQIKNNLESMTPETA
                     TIGRLVDTKTLFLEYRKKLQDVYTDVEDVKIAISDRFKLLQSQYTDEKYKEALEIIAT
                     KFGLTVNEDLQLVGEPNVVKSAIEAARESTKEQLRDYVKTSDYKTDKDGIVERLDTAE
                     AERTTLKGEIKDKVTLNEYQNGLEEQKQYTDDQLSDLSNNPEIKASIEQANQEAQEAL
                     KSYIDAQDNLKEKESQAYADGKISEEEQRAIQDAQAKLEEAKQNAELKARNAEKKANA
                     YTDNKVKESTDAQRRTLTRYGSQIIQNGKEIKLRTTKEEFNATNRTLSNILNEIVQNV
                     TDGTTIRYDDNGVAQALNVGPRGIRLNADKIDINGNREINLLIQNMRDKVDKTDIVNS
                     LNLSREGLDINVNRIGIKGGNNNRYVQIQNDSIELGGIVQRTWKGKRSTDDIFTRLKD
                     GHLRFRNNTAGGSLYMSHFGISTYIDGEGEDGGSSGTIQWWDKTYSDSGMNGITINSY
                     GGVVALTSDNNRVVLESYASSNIKSKQAPVYLYPNTDKVPGLNRFAFTLSNADNAYSS
                     DGYIMFGSDENYDYGAGIRFSKERNKGLVQIVNGRYATGGDTTIEAGYGKFNMLKRRD
                     GNRYIHIQSTDLLSVGSDDAGDRIASNSIYRRTYSAAANLHITSAGTIGRSTSARKYK
                     LSIENQYNDRDEQLEHSKAILNLPIRTWFDKAESEILARELREDRKLSEDTYKLDRYV
                     GLIAEEVENLGLKEFVTYDDKGEIEGIAYDRLWIHLIPVIKEQQLRIKKLEESKNAG"
     gene            19629..19781
                     /locus_tag="O6Y56_001189"
     CDS             19629..19781
                     /locus_tag="O6Y56_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574447.1"
                     /translation="MQDNKQGLQANPEYTIHYLSQEIMRLTQENAMLKAYIQENKENQ
                     QCAEEE"
     gene            19828..20115
                     /locus_tag="O6Y56_001190"
     CDS             19828..20115
                     /locus_tag="O6Y56_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574448.1"
                     /translation="MAKEIINNTERFILVQIDKEGTERVVYQDFTGSFTTSEMVNHAQ
                     DFKSEENAKKIAETLNLLYQLTNKKQRVKVVKEVVERSDLSPEVTVNTETV"
     gene            20173..20469
                     /locus_tag="O6Y56_001191"
     CDS             20173..20469
                     /locus_tag="O6Y56_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2951 domain-containing protein"
                     /protein_id="HDB5574449.1"
                     /translation="MGWFKKHEHEWRIRRLEENDKTMLSTLNEIKLGQKTQEQVNIKL
                     DKTLDAIQKEREIDEKNKKENDKNIRDMKMWVLGLVGTIFGSLIIALLRMLMGI"
     gene            20619..20795
                     /locus_tag="O6Y56_001192"
     CDS             20619..20795
                     /locus_tag="O6Y56_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative holin-like toxin"
                     /protein_id="HDB5574450.1"
                     /translation="MDRWWLSEYKEVVPMVALLKSLERRRLMITISTMLQFGLFLIAL
                     IGLVIKLIELSNKK"
     gene            complement(20848..20955)
                     /locus_tag="O6Y56_001193"
     CDS             complement(20848..20955)
                     /locus_tag="O6Y56_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574451.1"
                     /translation="MIFILWCVNLYIEKGQHAQTCYPNEPVKKTVAILD"
     gene            21007..21261
                     /locus_tag="O6Y56_001194"
     CDS             21007..21261
                     /locus_tag="O6Y56_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin"
                     /protein_id="HDB5574452.1"
                     /translation="MINWKIRMKQKSFWVAILSAIFLFAQNIAKAIGYDIQVYTEQLT
                     DGLNAILGFLVLTGVIQDPTTKGIGDSHQALEYEEPRRKY"
     gene            21273..22028
                     /locus_tag="O6Y56_001195"
     CDS             21273..22028
                     /locus_tag="O6Y56_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDB5574453.1"
                     /translation="MKTYSEARARLRWYQGRYIDFDGWYGYQCADLAVDYIYWLLEIR
                     MWGNAKDAINNDFKNMATVYENTPSFVPQIGDVAVFTKGIYKQYGHIGLVFNGGNTNQ
                     FLILEQNYDGNANTPAKLRWDNYYGCTHFIRPKYKSEGLMNKITNKVKPPAQKAVGKS
                     ASKITVGSKAPYNLKWSKGAYFNAKIDGLGATSATRYGDNRTNYRFDVGQAVYAPGTL
                     IYVFEIIDGWCRIYWNNHNEWIWHERLIVKEVF"
BASE COUNT         8200 a         2993 c         4567 g         6276 t
ORIGIN      
        1 tattgatagt tttatcactt cagagtaccg acgaaaaata aacgattata atctttatct
       61 tgataaattt gaagaacagt ttagtcaaaa gtttaaaata aacagaactt cgataaaaga
      121 aagaattatt attaatttaa acaagaggag atttaaatga tgtggattac tatgactatt
      181 gtatttgcta tattgctatt agtttgtatc agtattaata gtgatcgtgc aagagagata
      241 caagcactca gatatatgaa tgattatcta cttgatgaag tagttaaaac taaaggatac
      301 aacgggttag aagaatacag gattgaattg aagcgaatga ataacgatat taaaaagtaa
      361 tttatattat cggaggtatt gcattgaatg ataaagattg agaaacatga tatcaaaaag
      421 cttgaagaat acattcagca catcgataac tatcgaagag agttgaagat gcgagaatat
      481 gaattacttg aaagtcatga accagataat gcaggagcta gcaaaagtaa tttgccaggt
      541 aatccgattg aacgatgtgc aataaagaag tttagtgata acagatacaa tacattaaga
      601 aatatagtta atggtgtaga tagactgata gatgagagcg atgaggatac gcttgagtta
      661 ttaaggttta gatattggga ttgtcctatt ggttgttatg agtgggaaga tatcgcgcat
      721 tactttggta caagtaagac aagtatattg cgtagaagaa atgcactgat cgataagtta
      781 gcgaagtata ttggttatgt gtagcggact ttcaccctat gtaagtccgc attaaaacag
      841 tttattatgt tagtatcaga ttaatattta aagttattaa atgctaatac aacgcatgaa
      901 caagaggcgc atcactatgt gatgtgtctt tttatttatg aggtatgaac atgttcaaac
      961 taattgtaaa tacattacta cacatcaagt atagatgcgt cttgatacta cttaagttat
     1021 ataaggtgaa acattatgat gactaaagac gaacgtatac gattctataa gtctaaagaa
     1081 tggcaaacaa caagaaaaag agtgctagaa agagataatt atgaatgtca acaatgtaag
     1141 cgagacggca agttaacgac atatgacaaa agcaagcgta agtcgttgga tgtagatcat
     1201 atattatcgc tagaacatca tccggagttt gctcatgact taaacaattt agaaacactg
     1261 tgtattaaat gtcacaacaa aaaagaaaag agatttataa aaaaagaaaa taaatggaaa
     1321 gatgaaaaat ggtaaatacc cccgggtcaa aaaaatcgaa agtgatcaaa acgcttgggg
     1381 aacgggcagg ggctcgactt cgcgataatt ttaaaaatcc atgtataacc ccccctctta
     1441 taaccatttt aaggcaggtg atgaaatgga gattatagtt gatgaaaact tagtgcttaa
     1501 agaaaaagaa aggctgcaag tattatataa agacatacct agcaataaat taaaagtagt
     1561 tgatggttta attattcaag cagcaaggct acgtgtaatg cttgattaca tgtgggaaga
     1621 cataaaagaa aaaggtgact atgatttatt tactcaatct gaaaaggcgc caccatatga
     1681 aagggaaaga ccagtagcca aactatttaa tgctagagat gctgcatatc aaaaaataat
     1741 caaacaatta tcggatttat tgcccgaaga gaaagaagac acagaaacgc catctgatga
     1801 ttacctatga ttagtaataa atacgttgat gaatatataa atttgtggaa acaaggaaag
     1861 ataattttaa ataaagaaag aattgatctc tttaattatc tacaaaaaca tatatattca
     1921 cgagatgatg tatattttga tgaacagaaa atcgaggatt gtatcaaatt tattgaaaaa
     1981 tggtattttc caacattacc atttcaaagg tttatcatag ctaatatatt tcttatagat
     2041 aaaaatacag atgaagcttt ctttacagaa tttgctattt tcatgggacg tggaggcggg
     2101 aaaaacggtc taataagtgc tattagtgat tttctttcta cgcccttaca cggagttaaa
     2161 gaatatcaca tctccattgt tgctaatagt gaagatcaag caaaaacatc gtttgatgaa
     2221 atcagaaccg ttttaatgga taacaaacga aataagacgg gtaaaacgcc aaaagctcct
     2281 tatgaagtta gtaaagcaaa aataataaac cgtgcaacta aatcggttat tcgatataac
     2341 acatcaaaca caaaaaccaa agacggtgga cgtgaggggt gtgttatttt tgatgaaatt
     2401 cattatttct ttggtcctga aatggtaaac gtcaaacgtg gtggattagg taaaaagaaa
     2461 aatagaagaa cgttttatat aagtactgat ggttttgtta gagagggtta tatcgatgca
     2521 atgaagcaca aaattgcaag tgtattaagt ggcaaggtta aaaatagtag attgtttgct
     2581 ttttattgta agttagacga tccaaaagaa gttgatgaca gacagacgtg ggaaaaggcg
     2641 aacccaatgt tacataaacc gttatcagaa tacgctaaaa cactgctaag cacgattgaa
     2701 gaagaatata acgatttacc attcaaccgt tcaaataagc ctgaattcat gactaagcga
     2761 atgaatttgc ctgaagttga ccttgaaaaa gtaatagcac catggaaaga aatactagcg
     2821 actaatagag agataccaaa tttagataat caaatgtgta ttggtggttt agactttgca
     2881 aatatccgag atttcgcaag tgtagggcta ctatttcgaa agaacgacga ttatatttgg
     2941 ttaggacatt cttttgtaag acaagggttt ttggatgatg tcaaattaga gccacctatt
     3001 aaagaatggg aaaaaatggg attattgacc attgtagatg atgatgtcat tgaaattgaa
     3061 tatatagttg attggttttt aaaggctaga gaaaaatatg ggcttgaaaa agtcatagct
     3121 gataattata gaactgatat tgtaagacgt gcgtttgagg atgctggcat aaaacttgaa
     3181 gtacttagaa atccaaaagc aatacatgga ttacttgcac cacgtatcga tacaatgttt
     3241 gcgaaacata acgtaatata tggagacaat cctttgatgc gttggtttac taataatgtt
     3301 gcagtaaagg ttaaacccga tggtaataaa gaatatatta aaaaagatga aaatagaaga
     3361 aaaaccgatg ggttcatggc ttttgttcac gcattatata gagcagacga tatagtagac
     3421 aaagacatgt ctaaagcgct tgatgcatta atgagtatag atttctaata gaggaggtga
     3481 gacatgagta ttctagaaaa gatatttaaa actaggaaag atataacata tatgcttgat
     3541 ttagatatga tagaagatct atcacaacaa gcgtatgtga aacgtttagc gattgatagt
     3601 tgtattgaat ttgttgcgcg agctgtcgct caaagtcatt ttaaagtatt ggaaggtaat
     3661 agaattcaaa agaatgatgt ttactacaag ttaaatataa aaccaaatac tgacttatca
     3721 agcgatagtt tttggcaaca agttatatat aaactaattt atgataacga ggttttaatc
     3781 gtagtaagtg acagcaaaga attacttatc gcagatagct tttacagaga agagtacgct
     3841 ttgtatgatg atatattcaa agatgtaacg gttaaagatt atacttatca acgtactttc
     3901 acaatgcaag aggtcatata tttaaagtac aacaacaata aagtgacaca ctttgtagaa
     3961 agtctattcg aagattacgg gaaaatattc ggaagaatga taggtgcaca attaaaaaac
     4021 tatcaaataa gagggatttt gaaatctgcc tctagcgcat atgacgaaaa gaatatagaa
     4081 aaattacaag cgttcacaaa taaattattc aatactttta ataaaaatca actagcaatc
     4141 gcgcctttga tagaaggttt tgattatgag gaattatcta atggtggtaa gaatagtaac
     4201 atgccttttt ctgaattgag tgagctaatg agagatgcaa taaaaaatgt tgcgttgatg
     4261 attggtatac ctccaggttt gatttacgga gaaacagctg atttggaaaa gaacacgctt
     4321 gtatttgaga agttctgttt aacaccttta ttaaaaaaga ttcagaacga attaaacgcg
     4381 aaactcataa cacaaagcat gtatttgaaa gatacaagaa tagaaattgt cggtgtgaat
     4441 aaaaaagacc cacttcaata tgctgaagca attgacaaac ttgtaagttc tggttcattt
     4501 acaaggaatg aggtgcggat tatgttaggt gaagaaccat cagacaatcc tgaattagac
     4561 gaatacctga ttactaaaaa ctacgaaaaa gctaacagtg gtgaaaatga tgaaaaagaa
     4621 aaagatgaaa acactttgaa aggtggtgat gaagatgaaa gtggagatta aaggcgtcat
     4681 cgtttccaac gaagataaat gggtttacga aatgcttggt atggattcga cttgtcctaa
     4741 agatgtttta acacaactag aatttagtga tgaagatgtt gatattataa ttaactcaaa
     4801 tggtggtaac ctagtagctg gtagtgaaat atatacacat ttaagagctc ataaaggcaa
     4861 agtgaatgtt cgtatcacag caatagcagc aagtgcggca tcgcttatcg caatggctgg
     4921 tgaccacatc gaaatgagtc cggttgctag aatgatgatt cacaatcctt caagtattgc
     4981 gcaaggagaa gcgaaagatc taaatcatgc tgcagaaaca ttagaacatg ttggtcaaat
     5041 aatggctgag gcatatgcgg ttagagctgg taaaaacaaa caagaacttg tagaaatgat
     5101 ggctagggaa acgtggctaa atgctgatga agccattgaa caaggttttg cggatagtaa
     5161 aatgtttgaa aacgacaata tgcaaattgt agcaagcaat acacaagtgt tatcgaaaga
     5221 tgtattaaat cgtgtaacag ctttggtaag taaaacgcca gaggttaaca ttgatattga
     5281 cgcaatagca aataaagtaa ttgaaaaaat aaatatgaaa gaaaaggaat cagaaatcga
     5341 tgttgcagat agtaaagtat cagcaaatgg attttcaaga ttcctttttt aatacaaaaa
     5401 ataggaggtc ataaaatgac tataaattta tcggaaacat tcgcaaatgc gaaaaacgaa
     5461 tttattaatg cagtaaacaa cggtgaaccg caagaaagac aaaatgaatt gtacggtgac
     5521 atgattaacc aactatttga agaaactaaa ttacaagcaa aagcagaagc tgaaagagtt
     5581 tctagtttac ctaaatcagc acaatctttg agtgcaaacc aaagaagttt cttcatggat
     5641 atcaataaaa acgttaacta taaagaagaa aaacttttgc cagaagaaac aattgataga
     5701 atttttgaag atttgacgac gaatcatccg ttattagctg atttaggtat taaaaacgct
     5761 ggtttgcgtt tgaagttctt aaaatctgaa acttctggcg tagccgtttg gggtaaaatc
     5821 tatggtgaaa ttaaaggtca attagatgct gcgttcagtg aagaaacagc aattcaaaat
     5881 aaattgacag cgtttgttgt tttaccaaaa gatttaaatg attttggtcc tgcgtggatt
     5941 gaaagatttg ttcgtgttca aatcgaagaa gcatttgcag tggcgcttga aactgcgttc
     6001 ttaaaaggta ctggtaaaga ccaaccaatc ggcttaaacc gtcaagtaca aaaaggtgta
     6061 tcggtaactg agggtgctta tccagagaaa gaagaacaag gtacgcttac atttgctaat
     6121 ccgcgcgcta cggttaatga attgatgcaa gtgtttaaat accactcaac taacgagaaa
     6181 ggtaaatcag tagcggttaa aggtaatgta acaatggttg ttaatccgtc cgatgctttt
     6241 gaggttcaag cacagtatac acatttaaat gcaaatggcg tatatgttac tgctttacca
     6301 tttaatttga atgttatcga gtctacagtc caagaagcag gtaaggtttt aacgtacgtt
     6361 aaaggtttat atgatggtta tttagctggt ggtattaatg ttcagaaatt taaagaaaca
     6421 cttgcgttag atgatatgga tttatacact gcaaaacaat ttgcttacgg caaagcgaaa
     6481 gataataaag ttgctgctgt ttggaaatta gatttaaaag gacataagcc agctttagaa
     6541 ggtaccgaag aaacactata aaattttatg aggtgataaa atggtgaaat ttaaagttgt
     6601 tagagctttt aaagacatag agcacaatca acacaagtac aaagtagggg agttgtatcc
     6661 agctgaaggg tataacaatc ctcgtgttga attgttgaca aatcaaatca aaaataagta
     6721 cgacaaagtt tatatcgtac ctttagataa gctgacaaaa caagaattat tagaactatg
     6781 cgaatcatta caaaaaaaag cgtctagttc aatggttaaa agtgaaatcg tcgacttatt
     6841 gaatggtgaa gacaatgacg attgatgatt tgcttgtcaa atttaaatca cttgaaaaga
     6901 ttgaccataa ttcagaggat gagtacttaa agcagttgtt aaaaatgtcg tacgagcgta
     6961 taaaaaatca gtgcggagtt tttgaattag agaatttaat aggtcaagaa ttgatactta
     7021 tacgcgctag atatgcttat caagatttat tagaacactt caacgataat tacagacctg
     7081 aaataataga tttttcgtta tctctaatgg aggtatcaga agatgaagaa agtgtttaaa
     7141 aaacctagaa ttacaactaa acgtttaaat actcgtgttc atttttataa gtatactgaa
     7201 aataatggtc cagaagctgg agaaaaagaa gaaaaattat tatatagctg ttgggcgagt
     7261 attgatggtg tctggttacg tgaattagaa caagctatct caaacggaac ccaaaatgac
     7321 attaaattgt atattcgtga tccgcaaggt gattatttac ccagtgaaga acattatctt
     7381 gaaattgaat caagatattt caaaaatcgt ttgaatataa agcaagtatc accagatttg
     7441 gataataaag actttattat gattcgtgga ggatatagtt catgagtgtg aaagtgatag
     7501 gtgataaagc attagaaaga gaattagaaa aacgttttgg cataaaagag atggtaaaag
     7561 ttcaagataa ggcgttaata gctggtgcta aggtaattgt tgaagaagta aaaaaacaac
     7621 taaagccctc aaaagatacg ggagcattaa ttaatgaggt aagttttagt aaacctgaat
     7681 ggataaacgg aaaacgtaca attactgttc attggcgagg ttctaaagac cgttataaaa
     7741 tcgtacattt aattgaatat ggacacgttc aaaaagaaac aggtaaattt atcaaaccta
     7801 aagctatggg cggtgttaat agagcaataa gacaagggca aaataagtat tttgagacgc
     7861 taaaaaggga gttgaaaaaa ttgtgattga tattttgtac aaagttcatg aagtgattag
     7921 tcaagacaga attattagag agcacgtaaa tatcaataat attaagttca ataaataccc
     7981 taatgtaaaa gatactgatg taccttttat tgttattgac gatatcgacg acccaatacc
     8041 tacaacttat actgacggag atgagtgtgc atatagttat attgtccaaa tagatgtttt
     8101 tgttaagtac aatgatgaat ataatgcgag aatcataaga aataagatat ctaatcgtat
     8161 tcaaaagtta ttatggtctg aactaaaaat gggaaatgtt tcaaatggaa aaccggaata
     8221 tatagaagaa tttaaaacat atagaagctc tcgcgtttac gagggcattt tttataagga
     8281 ggaaaattaa atggcagtaa aacatgcaag tgcgccaaag gcgtatatta acattactgg
     8341 tttaggtttc gctaaattaa cgaaagaagg cgcggaatta aaatatagtg atattacaaa
     8401 aacaagagga ttacaaaaaa ttggtgttga aactggtgga gaactaaaaa cagcttatgc
     8461 tgatggcggt ccaattgaat cagggaatac agacggagaa ggtaaaatct cattacaaat
     8521 gcatgcgttc cctaaagaga ttcgcaaaat tgtttttaat gaagattatg atgaagatgg
     8581 cgtttacgaa gagaaacaag gtaaacaaaa caattacgta gctgtatggt tcagacaaga
     8641 gcgtagagac ggtacattta gaacagtttt attacctaaa gttatgttta caaatcctaa
     8701 aatcgatgga gaaacggctg agaaagattg ggatttctca agtgaagagg ttgaaggtga
     8761 ggcacttttc cctttagttg ataataaaaa gtctgtacgt aaatatatct ttgactcagc
     8821 taacatgaca aatcatggtg gcgacggtga aaaaggcgaa gaggctttct taaagaaaat
     8881 tttaggcgaa gaatatactg gaaacgtgac agaggataac gaagaaactt tgtaacgaaa
     8941 ccggcttcat cggaaactgc ggtaaagtcg gttaatatac cagatagcat taaaacactt
     9001 aaagttggcg acacatacga tttaaatgtt gtagtagagc catctaatca aagtaagtta
     9061 ttgaaataca caacagatca aacgaatatt gtatcaatca atagagatgg tcaagttact
     9121 gcggaagcac aaggcattgc tacggttaaa gcaacagttg gtaatatgag tgacactata
     9181 acaataaatg tagaagcata agagggggca acccctctat tttatttgaa aataaggaga
     9241 gtattataaa atggcaaaat taaaacgtaa cattattcaa ttagtagaag acccgaaagc
     9301 aaatgaaatt aaattacaaa cgtacttaac accacacttc atttcatttg aaattgtata
     9361 cgaagcaatg gatttaatcg atgatattga ggacgaaaat agcacgatga aaccaagaga
     9421 aatcgctgac agattgatgg atatggttgt aaaaatttac gataaccaat tcacagttaa
     9481 agacttaaaa gaacgtatgc atgcacctga tggaatgaat gcacttcgtg aacaagtaat
     9541 tttcattact caaggtcagc aaactgagga aactagaaat tttatccaga acatgaaata
     9601 aagcctgaag atttaacata taaagcaatg ttgaaaaata tggatactct catgatggac
     9661 ttaattgaaa atggtaaaga cgctaacgaa gttttaaaaa tgccatttca ttatgtactt
     9721 tccatatatc aaaataaaaa caatgacatt tctgaagaaa aagcagaggc tttaattgat
     9781 gcattttaac cttaaccgtt tggttagggt tatttttttg aactttttta gaaaggaggt
     9841 aaaaaatggg agaaagaata aaaggtttat ctataggttt ggatttggat gcagcaaatt
     9901 taaatagatc atttgcagaa atcaaacgaa actttaaaac tttaaattct gacttaaagt
     9961 taaccggcaa caacttcaaa tataccgaaa aatcaactga tagttaccaa caaaggatta
    10021 aagaacttga cggaactatc ataggttata agaaaaatgt tgatgattta gccaagcaat
    10081 atgacaaggt atctcaagaa cagggtgaaa acagtgcaga agctcaaaaa ttacggcaag
    10141 aatataacaa acaagcaaat gagctgaatt atttagaaag agaattgcaa aaaacatcgg
    10201 ctgagtttga agagttcaaa aaagcccaag ttgaagctca aagaatggca gaaagtggct
    10261 gggggaaaac cagtaaaatt tttgaaagta tgggacctaa attaacaaaa atgggtgatg
    10321 gtttaaaatc tattggtaaa ggtatgatga ttggtgttac cgcacctgtt ttaggtattg
    10381 cagcagcatc aggaaaagct tttgcagaag ttgataaagg tttagataca gttacccaag
    10441 caacaggagc aaccggcgga gagcttaaga agttgcagaa ttcatttaaa gatgtttatg
    10501 gcaactttcc agcagatgct gagactgtag gcggtgtttt aggggaagtt aacacaaggt
    10561 taggtttcac tggcaaagaa cttgagagtg ccacagagtc attcttgaaa tttagtcaca
    10621 taacaggttc tgaaggcgta caagccgttc aattaattac gcgtgcaatg ggtgatgcag
    10681 gtattgaagc tgatgagtat caaagtgtac ttgatatggt agcgaaagca gcacaggcta
    10741 gcggtataag tgttgataca ttagctgata gcattactaa atacggtgct ccaatgaggg
    10801 ctatgggctt tgagatgaaa gaatcaatcg ctttattctc tcaatgggag aaatcaggtg
    10861 ttaatactga aatagccttc agtggtttga aaaaagctat atccaattgg ggtaaagctg
    10921 gtaaaaatcc aagagaagaa tttaagaaga cattagcaga aattgaaaag acgccggata
    10981 tagctagcgc aacaagttta gcgattgaag catttggtgc aaaagcaggt cctgatttag
    11041 cagatgctat taaaggtggt cgttttagtt atcaagaatt tttaaaaact atcgaagatt
    11101 cccaaggcac agtaaatcaa acgtttaaag attctgaaag tggctccgaa agatttaaag
    11161 tagcaatgaa taaattaaaa ttagtaggtg ctgatgtatg gacttctatt gaaagtgcgt
    11221 ttgcaccagt aatggaagaa ttaatcaaaa agctatctat agcggttgat tggttttcca
    11281 atttaagtga tggttctaaa agatcaattg ttattttcgg tggtattgct gctgcaattg
    11341 gtcctgtagt ttttggatta ggcgcattta taagtacaat tggcaatgca gtaactgtat
    11401 tagccccact attagctggt attgcaaagg ctgatggatt aattagtttt ttatcgacta
    11461 aagtacctat attaggaact gtcttcacgg ctttaactgg tccaattggc attgtattag
    11521 gtgttttggc tggcttagca gtcgcattta caattgctta taagaaatct gaaactttca
    11581 gaaattttgt taatggtgca attgaaagtg ttaaacaaac atttagtaat tttattcaat
    11641 ttattcaacc tttcattgat tctgttaaaa acatctttaa acaagcgata tcagcaatag
    11701 ttgattttgc taaagatatt tggagtcaaa ttaatggatt ctttaatgaa aacggaattt
    11761 ctattgttca agcgcttcaa aatatatgca attttatcaa agctatattt gaatttatta
    11821 taaattttgt aattaaacca atcatgttcg cgatttggca agtgatgcaa tttatttggc
    11881 cggcggttaa agctttaatt gtcagtactt gggagaatat aaaaggtgtg atacaaggag
    11941 ctttaaatat catactaggt ttaattaagt tcttctcaag tttatttact ggagattggc
    12001 gaggagtttg ggatgcgatt gttatgattc ttaaaggagt cgttcaatta atatggaatt
    12061 taattcaatt atggtttgta ggcaaaatac ttggcgttgt taggtacttt ggcggattgc
    12121 taaaaggatt aatagcaggt atttgggacg taataaaaag tatattcagt aaatctttat
    12181 cagcaatttg gaatgcgaca aaaagtattt ttggattctt atttaatagt gtcaaatcaa
    12241 ttttcacgaa tatgaaaaat tggttatcta atacttggag tagtatccgt acgaatacga
    12301 taggaaaagc gcagtcatta tttagtggcg tcaaatcaaa atttactaat ttatggaatg
    12361 cgacgaaaga aatttttagt aatttaagaa attggatgtc aaatatttgg aattccatta
    12421 aagataatac ggtaggaatt gctagccgtt tatggagtaa ggtacgtgga atttttacaa
    12481 atatgcgtga cggcttacaa agtattatca gcaaaattaa aagtcatatc ggcggtatgg
    12541 tagatgctat taaaaaagga cttaataaat taatcgacgg tttaaactgg gtcggtggta
    12601 agttgggcat ggataaaata cctaagttac atactggtac agagcacaca catactacta
    12661 caagattagt taagaacggt aagattgcac gtgacacatt cgctacagtt ggagataagg
    12721 gacgcggaaa tggtccgaat ggtttcagaa atgaaatgat tgaattccct aatggcaaac
    12781 gggtacttac gcctaataca gatacgacag cgtacttacc taaaggttca aaagtatata
    12841 acggcgcaca aacttattca atgttaaatg gaacgcttcc aagatttagc ataggtacta
    12901 tgtggaaaga tattaaatcc ggtgcatcat cggcatttaa ctggacaaaa gatcaaatag
    12961 gtaaaggtac aaagtggctt ggcgataaag ttggtgatgt catggacttt atcgataatc
    13021 caggcaaact tttaaattat gtacttcaag cgtttggagt tgatttcagt tctctaacta
    13081 aaggtatggg tattgctggc gatataacaa aagctgcatg gtctaagatt aagaaaagtg
    13141 caatcaagtg gcttgaggat gctttcgcag agtcgggtga tggcggtgta ttagatatga
    13201 ataaattacg ttacttatac ggtcacactg ctgcttatac acgagaaacc ggacgcccat
    13261 tccatgaagg tctggatttt gattacattt acgaacctgt tccatcaacc attaatggta
    13321 gagcacaagt tatgcctttt cataatggtg gttatggaaa atgggtgaaa attgtaaagg
    13381 gcgccttaga agttatttat gcacatttat ctaaatataa agttaaaact ggtcaacaag
    13441 ttagggtcgg ccagactgtt ggtatatcgg ggaatacggg gtttagtaca ggacctcact
    13501 tacattatga gatgcgttgg aatggaagac atagagaccc gttaccgtgg ttaagaaaga
    13561 ataatggggg cggcaaaagt acacccggtg gtaatggtgc agctaatgct agacgagcta
    13621 ttaaggctgc tcaaaatatt ttaggaggaa ggtataaggc gagttggatt actaacgaga
    13681 tgatgcgtgt tgcgagtcgt gaatccaatt atacagctaa tgcagtcaat aattgggata
    13741 gcaacgcaag agctggtata ccttcaagag gtatgttcca aatgatagat ccttcattta
    13801 gagcgtacgc aaagtcgggt tacaataatc ctctcaaccc aactcatcaa gctatatcgg
    13861 ctatgagata tattgtgggt aaatgggtac caagaacagg ctcatggaga gctgcgttca
    13921 aacgtgctgg tgattacgca tatgctacag gtggaaaagt ttttgatggt tggtataact
    13981 taggtgaaga cggtcatcca gaatggatta ttccaacaga tccagctcgt agaaatgatg
    14041 caatgaagat tttgcattat gcagcagcag aagtaagagg gaaaaaagcg agtaaaaata
    14101 agcgtcctag ccaattatca gacttaaacg ggtttgatga tcctagctta ttattgaaaa
    14161 tgattgaaca acagcaacaa caaatagctt tattactgaa aatagcacaa tctaacgatg
    14221 tgattgcaga taaagattat cagccgatta ttgacgaata cgcttttgat aaaaaggtga
    14281 acgcgtctat agaaaagcga gaaaggcaag aatcaacaaa agtaaagttt agaaaaggag
    14341 gaattgctat tcaatgatag acactattaa agtgaacaac aaaacaattc cttggttgta
    14401 tgtcgaaaga gggtttgaaa taccctcttt taattatgtt ttaaaaacag aaaatgtaga
    14461 tggacgttcg gggtctatat ataaagggcg taggcttgaa tcttatagtt ttgatatacc
    14521 tttggtggta cgtaatgact atttatctca caacggcatt aaaacacatg atgacgtctt
    14581 gaatgaatta gtaaagtttt ttaactacga ggaacaagtt aaattacaat tcaaatctaa
    14641 agattggtac tggaacgctt atttcgaagg accaataaag ctgcacaaag aatttacaat
    14701 acctgttaag ttcactatca aagtagtact aacagaccct tacaaatatt cagtaacagg
    14761 aaataaaaat actgcgattt cagaccaagt ttcagttgta aatagtggga ctgctgacac
    14821 tcctttaatt gttgaagccc gagcaattaa accatctagt tactttatga ttactaaaaa
    14881 tgatgaagat tattttatgg ttggtgatga tgaggtaacc aaagaagtta aggattacat
    14941 gcctcctgtt tatcatagtg agtttcgtga tttcaaaggt tggactaaga tgattactga
    15001 agatattcca agtaatgact taggtggtaa ggtcggcggt gactttgtga tatccaatct
    15061 tggcgaagga tataaagcaa ctaattttcc tgatgcaaaa ggttgggttg gtgctggcac
    15121 gaaacgaggg ctccctaaag cgatgacaga ttttcaaatt acctataaat gtattgttga
    15181 acaaaaaggt aaaggtgccg gaagaacagc acaacatatt tatgatagtg atggtaagtt
    15241 acttgcttct attggttatg aaaataaata tcatgataga aaaataggac atattgttgt
    15301 tacgttgtat aaccaaaaag gagaccccaa aaagatatac gactatcaga ataaaccgat
    15361 aatgtataac ttggacagaa tcgttgttta tatgcggctc agaagagtag gtaataaatt
    15421 ttctattaaa acttggaaat ttgatcacat taaagaccca gatagacgta aacctattga
    15481 tatggatgag aaagagtgga tagatggcgg taagttttat cagcgtccag cttctatcat
    15541 agctatctat agtgcgaagt ataacggtta taagtggatg gagatgaatg gattaggttc
    15601 attcaatacg gagattctac cgaaaccgaa aggcgcaagg gatgtcatta tacaaaaagg
    15661 tgatttagtg aaaatagata tgcaagcaaa aagtgttgtc atcaatgagg aaccaatgtt
    15721 gagcgagaaa tcgtttggaa gtaattattt caatgttgat tctgggtaca gtgaattaat
    15781 catacaacct gaaaacgtct ttgatacgac ggttaaatgg caagatagat atttatagaa
    15841 aggagatgag agtgtgatac atgttttaga ttttaacgac aagattatag atttcctttc
    15901 tactgatgac ccttccttag ttagagcgat tcataaacgt aatgttaatg acaattcaga
    15961 aatgcttgaa ctgctcatat catcagaaag agctgaaaag ttccgtgaac gacatcgtgt
    16021 tattataagg gattcaaaca aacaatggcg tgaatttatt attaactggg ttcaagatac
    16081 gatggacggc tacacagaga tagaatgtat agcgtcttat cttgctgata taacaacagc
    16141 taaaccgtat gcaccaggaa aatttgagaa aaagacaact tcagaagcat tgaaagatgt
    16201 gttgagcgat acaggttggg aagtttctga acaaaccgaa tacgatggct tacgtactac
    16261 gtcatggact tcttatcaaa ctagatatga agttttaaag caattatgta caacctataa
    16321 aatggtttta gatttttata ttgagcttag ctctaatacc gtcaaaggta gatatgtagt
    16381 actcaaaaag aaaaacagct tattcaaagg taaagaaatt gaatatggta aagatttagt
    16441 cgggttaact aggaagattg atatgtcaga aatcaaaaca gcattaattg ctgtgggacc
    16501 tgaaaatgac aaagggaagc gtttagagct agttgtgaca gatgacgaag cgcaaagtca
    16561 attcaaccta cctatgcgct atatttgggg gatatatgaa ccacaatcag atgatcaaaa
    16621 tatgaatgaa acacgattaa gttctttagc caaaacagag ttaaataaac gtaagtcggc
    16681 agttatgtca tatgagatta cttctactga tttggaagtt acgtatccgc acgagattat
    16741 atcaattggc gatacagtca gagtaaaaca tagagatttt aacccgccat tgtatgtaga
    16801 ggcagaagtt attgctgaag aatataacat aatttcagaa aatagcacat atacattcgg
    16861 tcaacctaaa gagttcaaag aatcagaatt acgagaagag tttaacaagc gattaaacct
    16921 aatacaccaa aaattaaacg acaatattag caatatcaat actatagtaa aagatgttgt
    16981 agatggtgaa ttagaatact ttgaacgcaa aattcataaa agtgatacac cgccagaaaa
    17041 tccagtcaat gatacgcttt ggtatgatac aagtaaccct gatgttgctg tcttgcgtag
    17101 atattggaat ggtcgatgga ttgaagcaac accaaatgat gttgaaaaat taggtggtat
    17161 aacaagagag aaagcgctat tcagtgaatt aaacaatatt tttattaatt tatctataca
    17221 acacgctagt cttttgtcag aagctacaga attactgaat agcgagtact tagtagataa
    17281 tgatttgaaa gcggacttac aagcaagttt agacgctgtg attgatgttt ataatcaaat
    17341 taaaaataat ttagaatcta tgacacccga aactgcaacg attggtcggt tggtagatac
    17401 aaaaacttta tttcttgagt atagaaagaa attacaagat gtttatacag atgtagaaga
    17461 tgtcaaaatc gccatttcag atagatttaa attattacag tcacaataca ctgatgaaaa
    17521 atataaagaa gcgttggaaa taatagcaac aaaatttggt ttaacggtga atgaagattt
    17581 gcagttagtc ggagaaccta atgttgttaa atcagctatt gaagcagcta gagaatccac
    17641 aaaagaacaa ttacgtgact atgtaaaaac atcggactat aaaacagaca aagacggtat
    17701 tgttgaacgt ttagatactg ctgaagctga gagaacgact ttaaaaggtg aaatcaaaga
    17761 taaagttacg ttaaacgaat atcaaaacgg attggaagaa caaaaacaat atactgatga
    17821 ccagttaagt gatttgtcca ataatcctga gattaaagca agtattgaac aagcaaatca
    17881 agaagcgcaa gaagctttaa aatcatacat tgatgctcaa gataatctta aagagaagga
    17941 atcgcaagcg tatgctgatg gtaaaatttc ggaagaagag caacgcgcta tacaagatgc
    18001 tcaagctaaa cttgaagagg caaaacaaaa cgcagaacta aaggctagaa acgctgaaaa
    18061 gaaagctaat gcttatacag acaacaaggt caaagaaagc acagatgcac agaggagaac
    18121 actgactcgc tatggttctc aaattataca aaatggtaag gaaatcaaat taagaactac
    18181 taaagaagag tttaatgcaa ccaatcgtac actttcaaat atattaaacg agattgtcca
    18241 aaacgttaca gatggaacaa caatcagata tgatgataac ggagtggctc aagctttaaa
    18301 tgtggggcca cgtggtatta gattaaatgc tgataaaatt gatattaacg gtaatagaga
    18361 aataaacctt cttatccaaa atatgcgaga taaagtagat aaaaccgata ttgtcaacag
    18421 ccttaattta tcaagagagg gtcttgatat caatgttaat agaattggaa ttaaaggcgg
    18481 taacaataac agatatgttc aaatacagaa tgattctatt gaactaggtg gtattgtgca
    18541 acgaacttgg aaaggcaaac gatcaaccga tgatatattc acacgtctta aagatggaca
    18601 tctaaggttt agaaataata ccgcaggcgg ttcactttat atgtcacatt ttggtatttc
    18661 aacatatatt gatggagaag gcgaagacgg aggttcatcc ggtactattc aatggtggga
    18721 taaaacttac agtgatagcg gtatgaatgg cataacaatc aattcctatg gtggtgtcgt
    18781 tgcactaacg tcagataata atcgggttgt tctggagtct tacgcttcat cgaatatcaa
    18841 aagcaaacag gcaccggtgt atttatatcc aaacacagac aaagtgcctg gattaaaccg
    18901 atttgcattc acgctgtcta atgcagataa tgcttattcg agtgacggtt atattatgtt
    18961 tggttctgat gagaactatg attacggtgc gggtatcagg ttttctaaag aaagaaataa
    19021 aggtcttgtt caaattgtta atggacgata tgcaacaggt ggagatacaa caatcgaagc
    19081 agggtatggc aaatttaata tgctgaaacg acgtgatggt aataggtata ttcatataca
    19141 gagtacagac ctactgtctg taggttcaga tgatgcagga gataggatag cttctaactc
    19201 aatttataga cgtacttatt cggccgcagc taatttgcat attacttctg ctggcacaat
    19261 tgggcgttcg acatcagcgc gtaaatacaa gttatctatc gaaaatcaat ataacgatag
    19321 agatgaacaa ctggaacatt caaaagctat tcttaactta cctattagaa cgtggtttga
    19381 taaagctgag tctgaaattt tagctagaga gctgagagaa gatagaaaat tatcggaaga
    19441 cacctataaa cttgatagat acgtaggttt gattgctgaa gaggtggaga atttaggatt
    19501 aaaagagttt gtcacgtatg atgacaaagg agaaattgaa ggtatagcgt atgatcgtct
    19561 atggattcat cttatccctg ttatcaaaga acaacaacta agaatcaaga aattggagga
    19621 gtcaaagaat gcaggataac aaacaaggat tacaagctaa tcctgaatat acaattcatt
    19681 atttatcaca ggaaattatg aggttaacac aagaaaacgc gatgttaaaa gcgtatatac
    19741 aagaaaataa agaaaatcaa caatgtgctg aggaagagta atccttagca ctatttttat
    19801 acaaaaattt aaggaggtca tttaattatg gcaaaagaaa ttatcaacaa tacagaaagg
    19861 tttattttag tacaaatcga caaagaaggt acagaacgtg tagtatatca agatttcaca
    19921 ggaagtttta caacttctga aatggttaac catgctcaag attttaaatc tgaagaaaac
    19981 gctaagaaaa ttgcggagac gttaaatttg ttatatcaat taactaacaa aaaacaacgt
    20041 gtgaaagtag ttaaagaagt agttgaaaga tcagatttat ctccagaggt aacagttaac
    20101 actgaaacag tatgaaaagc tatgagttag atactcataa tctttattct tttagaaagc
    20161 gggtgtactg aattggggtg gttcaaaaaa cacgaacatg aatggcgcat cagaaggtta
    20221 gaagagaatg ataaaacaat gctcagcaca ctcaacgaaa ttaaattagg tcaaaaaacc
    20281 caagagcaag ttaacattaa attagataaa accttagatg ctattcaaaa agaaagagaa
    20341 atagatgaaa agaataagaa agaaaatgat aagaacatac gtgatatgaa aatgtgggtg
    20401 cttggtttag ttgggacaat atttgggtcg ctaattatag cattattgcg tatgcttatg
    20461 ggcatataag agaggtgaat aaaatgttta aactaatctt tggttatagt ttctggacat
    20521 gtttttggtt cggtaaatgt aaataagttt tagtcagtgc ttcggtactg actttttatt
    20581 tattgttgta attatggtaa tatgcagaag tgagcaagtt ggatagatgg tggctatctg
    20641 agtataagga ggtggtgcct atggtggcat tactgaaatc tttagaaagg agacgcctaa
    20701 tgattacaat tagtaccatg ttgcagtttg gtttattcct tattgcattg ataggtctag
    20761 taatcaagct tattgaatta agcaataaaa aataaccatc gctaactttg gctggtttcg
    20821 atggttaaat ggttattaat ttaatcttta atctaaaata gccaccgtct ttttaacggg
    20881 ctcattaggg taacatgttt gcgcatgttg ccctttttct atatataaat taacacacca
    20941 taatataaat atcaaataga cggcttatta gtcgtctttt tattttgggt aaaaggagat
    21001 aagaatatga ttaattggaa aattagaatg aaacaaaaat cattttgggt agcgatattg
    21061 tcagctatct ttttatttgc tcaaaacatc gcaaaagcta ttgggtatga tatccaagtt
    21121 tatacagagc aattaacaga cggtttaaac gctatattag gatttttagt attaactggt
    21181 gtgattcaag acccgactac taaaggtata ggtgatagcc accaagcttt agaatatgaa
    21241 gaaccaagaa gaaaatacta ggaggtaaaa taatgaaaac atacagtgaa gcaagagcaa
    21301 ggttacgttg gtatcaaggt agatatattg attttgacgg ttggtatggt taccaatgtg
    21361 cagatttagc agttgattac atttattggt tgttagaaat tagaatgtgg ggaaatgcaa
    21421 aagatgcaat caataacgat tttaaaaaca tggcaacagt atatgaaaac acaccatcgt
    21481 ttgttccaca aataggtgat gtggctgtat ttaccaaagg aatatataaa caatacggtc
    21541 atattggttt agtgtttaat ggtggtaata caaaccaatt tttaattttg gaacagaact
    21601 atgacggtaa cgcaaatacg cctgcaaagt tacgttggga taattattac ggctgtactc
    21661 actttattag acctaagtat aaaagtgagg gcttaatgaa taagatcaca aataaagtta
    21721 aaccacctgc tcaaaaagca gtcggtaaat ctgcaagtaa aataacagtt ggaagtaaag
    21781 cgccttataa ccttaaatgg tcaaaaggtg cttattttaa tgcgaaaatc gacggcttag
    21841 gtgctacttc agccactaga tacggtgata atcgtactaa ctatagattc gatgttggac
    21901 aggctgtata cgcgcctgga acattaatat atgtgtttga aattatagat ggttggtgtc
    21961 gcatttattg gaacaatcat aatgagtgga tatggcatga gagattgatt gtgaaagaag
    22021 tgttttaatt cttagg
//
LOCUS       DALMNS010000036        21341 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.036, whole genome shotgun sequence.
ACCESSION   DALMNS010000036 DALMNS010000000
VERSION     DALMNS010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 21341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21341
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.036"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            63..599
                     /gene="amaP"
                     /locus_tag="O6Y56_001196"
     CDS             63..599
                     /gene="amaP"
                     /locus_tag="O6Y56_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline shock response membrane anchor protein
                     AmaP"
                     /protein_id="HDB5574454.1"
                     /translation="MKRLKNFILGLLIVVIVGFLLFMYIQDGRITEYQDYFLQFEWFQ
                     PLLISLAALLILIGLILVFSIFKPTHRKPGLYKDFDDGHVYVSRKAVEKTAFDTVAKY
                     DQVRQPNVVAKLYNKKNKSYIDIKTDFFVPNNVQVQSLTEAIRADIKKNVEYFTEMPV
                     RKLEVNVRDQKTSGPRVL"
     gene            612..851
                     /locus_tag="O6Y56_001197"
     CDS             612..851
                     /locus_tag="O6Y56_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2273 domain-containing protein"
                     /protein_id="HDB5574455.1"
                     /translation="MANNHNQNGQDSTQQVINFLKVFKWRIVGFLAFLLIAILFLTLG
                     FWKTILIIVLCLIGVGIGYIKDRKQDFMNFLNRWS"
     gene            916..1425
                     /locus_tag="O6Y56_001198"
     CDS             916..1425
                     /locus_tag="O6Y56_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HDB5574456.1"
                     /translation="MTVDNNKAKQAYDNQTGVNEKEREERQKQQEQNQEPQFKNKLTF
                     SDEVVEKIAGIAAREVKGILDMKGGLTDTFTNAFSSGNNVTQGVSVEVGEKQAAVDLK
                     VILEYGESAPKIFRKVTELVKEQVKYITGLDVVEVNMQVDDVMTQKEWKQKHEKNNEN
                     NNQERQGLQ"
     gene            complement(1586..3562)
                     /gene="sfaD"
                     /locus_tag="O6Y56_001199"
                     /gene_synonym="sfnaD"
     CDS             complement(1586..3562)
                     /gene="sfaD"
                     /locus_tag="O6Y56_001199"
                     /gene_synonym="sfnaD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ornithine--citrate ligase SfaD"
                     /protein_id="HDB5574457.1"
                     /translation="MNLNLIFKEQTLKFNKEEQETYLFLQQHNNDWANIFKEMILQGR
                     DKVTQRLVTSMHRENLVKARTQSKKILSRDLIMLDISTTHILEIQFPQAKQTLYAPIT
                     GEHAFDRIDVEGPFYIKDDITNTITRVHHPNEILECILIEAPDLKNAASDQFQQDLIN
                     SATNMTFAISYQALSMQHDSAPLFNIIENSEDSYLRSEQAVIEGHPLHPGAKLRKGLN
                     ALQTFLYSSEFNQPIKLKIVLIHSKLSRTMSLSKDYDTTVHQLFPDLIKQLENEFTAK
                     FNFNDYHIMIVHPWQLDDVLHSDYQAEVDKELIIEAKHTLDYYAGLSFRTLVPKYPAM
                     SPHIKLSTNVHITGEIRTLSEQTTHNGPLMTRILNDILKKDVIFKSYASTIIDEVAGI
                     HFYNEQDEADYQTERSEQLGTLFRKNIYQMIPQEVTPMIPSSLVATYPFNNESPIVTL
                     IKRYQSAASLSDFESSAKSWVETYSKALLGLVIPLVTKYGIALEAHLQNAIATFRKDG
                     LLDTMYIRDFEGLRIDKAQLNDMGYSTSHFHEKSRILTDSKTSVFNKAFYSTVQNHLG
                     ELILTISKASNDSNLERHMWCIVRDVLDNIFDQLVLSTHKSNQVNENRINEIKDTMFA
                     PFIDYKCVTTMRLEDEAHHYTYIKVNNPLYRENN"
     gene            3664..4857
                     /gene="sfaA"
                     /locus_tag="O6Y56_001200"
     CDS             3664..4857
                     /gene="sfaA"
                     /locus_tag="O6Y56_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin A export MFS transporter"
                     /protein_id="HDB5574458.1"
                     /translation="MTKYFFSSSFLLFLGNWIGQIGLNWFVLTTYHNAVYLGIVNFCR
                     LVPILLLSVWAGAIADKYDKGRLLRITISSSFLVTAILCVLTYSFTAIPISVIIIYAT
                     LRGILSAVETPLRQAILPDLSDKISTTQAVSFHSFIINICRSIGPAIAGVILAVYHAP
                     TTFLAQAICYFIAVLLCLPLHFKVTKIPEYATRYMPLKVIIDYFKLHMEGRQIFITSL
                     LIMATGFSYTTLLPVLTNKVFPGKSEIFGIAMTMCAIGGIIATLVLPKVLKYIGMVNM
                     YYLSSLLFGIALLGVVFHNIVIMFICITLIGLFSQWARTTNRVYFQNNVKDYERGKVL
                     SIIMMDRGMIPLGSLLMSICADVFGIVRTFSIMGISTICITMVFYFINRKLKLKLEES
                     NHGIS"
     gene            4844..6601
                     /gene="sfaB"
                     /locus_tag="O6Y56_001201"
     CDS             4844..6601
                     /gene="sfaB"
                     /locus_tag="O6Y56_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin A synthetase SfaB"
                     /protein_id="HDB5574459.1"
                     /translation="MVYLEWAKADRNIQYRVINAIIKERIYPEQTFISQKESLIEIQY
                     HMHVLTIEVVRKSALERYEFTGDITYLNKGETSLIITLEGLLDVLNHDFDIPISERLR
                     EELIHSRDSLVETYKQMSHRQTLISQSFKFSRLPQDINFFSWLQHVKDSDKTDDLTYS
                     ESLVPEGHPTHPLTKTKLPLTMEEVRAYAPEFEKEIPLQIMMIEKDHVVCTAMDGNDQ
                     FIIDEIIPEYYNQIRVFLKSLGLKSEDYRAILVHPWQYDHTIGKYFEAWIAKKILIPT
                     PFTILSKATLSFRTMSLIDKPYHVKLPVDAQATSAVRTVSTVTTVDGPKLSYALQNML
                     NQYPGFKVAMEPFGEYANVDKDRARQLACIIRQKPEIDGKGATVVSASLVNKNPIDQK
                     VIVDSYLEWLNQGITKESITTFIERYSQALIPPLIAFIQNYGIALEAHMQNTVVNLGP
                     HFDIQFLVRDLGGSRIDLETLQHRVSDIKITNDSLIADSIDAVIAKFQHAVIQNQMAE
                     LIHHFNQYDCVEEAELFNIVQQVVAHAINPTLPHANELKDILFGPTITVKALLNMRME
                     NKVKQYLNIELDNPIKKEV"
     gene            6608..7678
                     /gene="sfaC"
                     /locus_tag="O6Y56_001202"
     CDS             6608..7678
                     /gene="sfaC"
                     /locus_tag="O6Y56_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin A biosynthesis protein SfaC"
                     /protein_id="HDB5574460.1"
                     /translation="MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIAGDRTIVE
                     SLKALGINHVAESRLDNIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIH
                     QINEVAEVLGKKHKILLMVDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCF
                     KSDAPSDDDIFMINRFVSAVEREIGYRLKIISGGNSSMLPQLLYNDLGKINELRIGET
                     LFRGVDTTTNQAIAMLYQDAITLEAEILEIKPRVNTQTHESFIQAIVDIGYLDTKVDN
                     ISPMDQHINILGASSDHLMLDLNGQGHYQVGDHISFSLNYEALSHSMYMKNLHKVYID
                     DSKIDTLLQNFDVKSPAMVNQY"
     gene            complement(7779..7905)
                     /locus_tag="O6Y56_001203"
                     /pseudo
     CDS             complement(7779..7905)
                     /locus_tag="O6Y56_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500901.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8070..9053
                     /locus_tag="O6Y56_001204"
     CDS             8070..9053
                     /locus_tag="O6Y56_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDB5574461.1"
                     /translation="MRGLKTFGILGLIVALFLVAACGNTDNSSKKESSTKDTISVKDE
                     NGTVKVPKDAKRIVVLEYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVG
                     TRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTI
                     AKALNKEKEGEKRLAEHDKLIKKYKDEIKFDRNQKVLPAVVAKAGLLAHPNYSYVGQF
                     LNELGFKNALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDNAKKDSAEFKK
                     LQEDPTWKKLNAVKNNRVDIVDRDVWARSRGLISSEEMAKELVELSKKEQK"
     gene            9065..10096
                     /locus_tag="O6Y56_001205"
     CDS             9065..10096
                     /locus_tag="O6Y56_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDB5574462.1"
                     /translation="MAIKEISSQSAIDYKRKRRTTLTYIVSLCFLFICIYLNMAIGSS
                     KINFSDIVHYVTGHTDTKATFLLHNVRMPRMIAGLFIGGALAVSGLLMQAMTRNPLAS
                     PKIFGVSSGASFFIVFVTIIIPSLEYYALYLGVIGAFIGGLTVYTLSGATKGMTPIKL
                     ALAGMAIHLFFSSMTEGIIILNENSNEQVMFWLVGSLSSMKWDEILTILPWIIGALIV
                     TIFIGRQLTIMELGDDIAKGLGQNINKVRIIIGLLVIILTGMSVSVAGPIGFVGLIVP
                     HIVKRYVSKNYLVMIPLTFIIGADLLLLSDVLSRLITYPYESPVGIVTSFVGALYFLF
                     ITIRGVKRI"
     gene            10093..11061
                     /locus_tag="O6Y56_001206"
     CDS             10093..11061
                     /locus_tag="O6Y56_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDB5574463.1"
                     /translation="MMTTKIIRRYSLITILLIVSIFISLCVGSVMIHPIDAIKGIFTQ
                     DDFILNEYRIPRTLLGIIIGSSLAISGAIIQAVIRNPLASPDVIGISKGASLAAVIII
                     MIFPTAPLFVLPIGSFFGAFAVSLFLSFLISKYDVKGSKLALIGLAIGAICTAIVQFL
                     LIRNPLEANKALVWLTGSLYGHDMSNIYTILPWFLITIPIIILLSYQLDVLNLGDAVA
                     TALGLKVKTIKMILLILAVILAGSAISVVGGISFLGLIAPHIARQLIGNKTLHVIIMS
                     GLIGAILLTFGDGLARGIHPPLDIPVGVIIAIIGAPYFLILLRRMK"
     gene            11296..12666
                     /locus_tag="O6Y56_001207"
     CDS             11296..12666
                     /locus_tag="O6Y56_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001670170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiH family protein"
                     /protein_id="HDB5574464.1"
                     /translation="MDSFSRKEIIIGRLKFITMSLIGILLFLVPIPVEQDGQKQTTLP
                     VAFLAGVLKDVLGGVMPFLIVTIITLSGIITLICSTILKDKLKPDGLMNNAFNVRIGW
                     LILRILAVVFAWMTFLRIGSKVIYSDETGGLLFSSLLPTLVAVFLFAALFLPLLMEYG
                     LLEMLGPIFRPVMRPLFTLPGRSTVDNLASFIGDGTVGVLITSRQYGEGYYSRREATV
                     ISTTFSVVSITFAIVVAETVHMQNQFFAFYLSVIVSCLVAAVIMPRIWPLNKIPDEYA
                     KEVPESARTEALPEGKTALRHGFDTATEVGIKAPGVIDFFKSGLKTVVDMWFVILPVV
                     MSIGTIATIIANYTPFFVILGKPFVPFLELMQIPEAAQASQTIIIGFADMFLPSILIE
                     GVQNDITRFVIGALSISQLIYLSEVGGVILGSKIPVSIGKLFMIFLIRTIITLPIISL
                     MAHLLL"
     gene            complement(12798..13058)
                     /locus_tag="O6Y56_001208"
     CDS             complement(12798..13058)
                     /locus_tag="O6Y56_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574465.1"
                     /translation="MAMTVKKDNNEVRIQWRVADIKIPTSEIKNITQDQDIHAVPKLD
                     SKDVSRIGSTFGKTNRVIIDTEDHEYIIYTQNDQKVYNELTK"
     gene            13236..13751
                     /locus_tag="O6Y56_001209"
     CDS             13236..13751
                     /locus_tag="O6Y56_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDB5574466.1"
                     /translation="MTGKTHASCGMLVGALTTQYFQTDIFSSVTVIILATLASLSPDI
                     CHTQSKIGRRFKVISFFVRLIFGHRTFTHSILFIVIIAFLLQIIQTPNYYMVAIIIGL
                     VSHVILDMITPKGVKLFYPLPFNVKTPIQFKTGGLVDLSLATALMVGTVYVLFQPFIN
                     DIISNWNTKFL"
     gene            13795..14982
                     /locus_tag="O6Y56_001210"
     CDS             13795..14982
                     /locus_tag="O6Y56_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDPGP type 1 family protein"
                     /protein_id="HDB5574467.1"
                     /translation="MLDKNQLAKYKQDHLCEYEKIMSNNEKEALEEKVASLDLDFIAK
                     LYNDLYINKKTIDDVSAVSEVKYGIKSQMSDDEIKRLEEQGLQAIKEGQFAVLLMAGG
                     QGTRLGYKGPKGSFEIEGVSLFELQANQLKTLNHQSGHTIQWYIMTSDINHEETLAYF
                     EAHSYFGYDQEAIHFFKQDNIVALSEEGKLILNQQGRIMETPNGNGGVFKSLDKAGYL
                     EEMSNNGVKYIFLNNIDNVLVKVLDPLFAGFTVEHNYDITSKTIQPKPGESVGRLVNV
                     DCKDTVLEYSELDPEVANQFNNANIGIHAFKLGFILNAVNRELPYHLAIKNLKQLDEN
                     FGVIEQPTLKFELFYFDIFTYGTSFVTLQVPREEEFSPLKNKEGKDSVATATEDLRRM
                     GLI"
     gene            15001..15684
                     /locus_tag="O6Y56_001211"
     CDS             15001..15684
                     /locus_tag="O6Y56_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HDB5574468.1"
                     /translation="MSKSSKKSNDTIAETFKDIIPLSFGEEIGNAASHGLAALLTLLV
                     LPYAAVHSYIANGTLASVSMSIYVISIFMMFISSTIYHSMQNETPHKYILRIIDHSMI
                     YVAISGTYTPILLTIVGGWIGWTVFILLWGTTLWGILYKSIAVKVNQKLSLIVYLVMG
                     WVGIILLPIIFIRTSWIFILFIFLGGVSYTIGAWFYAQKNRPYFHMIWHIFIVIASLL
                     HLIAILYFM"
     gene            15857..17200
                     /locus_tag="O6Y56_001212"
     CDS             15857..17200
                     /locus_tag="O6Y56_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5574469.1"
                     /translation="MRLKSIITVIALILIMFMSAIESSIISLALPTIKQDLNAGNLIS
                     LIFTAYFIALVIANPIVGELLSRFKIIYVAIAGLLLFSIGSLMCGLSTNFTMLIISRV
                     IQGFGSGVLMSLSQIVPKLAFEIPLRYKIMGIVGSVWGISSIIGPLLGGGILEFATWH
                     WLFYINIPIAIIAIILVIWTFHFPEEETVAKSKFDTKGLTLFYVFIGLIMFALLNQQL
                     LLLNFLSFILAIVVAIRLFKVEKHVSSPFLPVVEFNRSITLVFITDLLTAICLMGFNL
                     YIPVYLQEQLGLSPLQSGLVIFPLSVAWITLNFNLHRIEAKLSRKVIYLLSFTLLLVS
                     SIIISFGIKLPLLIAFVLILAGLSFGYIYTKDSVIVQEETSPLQMKKMMSFYGLTKNL
                     GASIGSTIMGYLYAIQSAIFGPNLHNVLSAVAVISTGLIVLWVVFFKEQLSQSKE"
     gene            17299..17772
                     /gene="sepA"
                     /locus_tag="O6Y56_001213"
     CDS             17299..17772
                     /gene="sepA"
                     /locus_tag="O6Y56_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter SepA"
                     /protein_id="HDB5574470.1"
                     /translation="MIVNYLKHKFYNLLTTMIVLFIFVLSGAIFLTFLGFGLYGLSRI
                     LIYFRLGDFTYNRSMYDNLLYYGSYIIFGYFIIFAVEHLMDYFRKMLPENAYFRGATF
                     HLISYTVATTLFYFIIHLNYVYINIDFWVIMVIIGFLYVCKLQFYPESKNLNNRK"
     gene            18338..19780
                     /gene="lmrS"
                     /locus_tag="O6Y56_001214"
     CDS             18338..19780
                     /gene="lmrS"
                     /locus_tag="O6Y56_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter LmrS"
                     /protein_id="HDB5574471.1"
                     /translation="MAKVELTTRRRNFIVAVMLISAFVAILNQTLLNTALPSIMRELN
                     INESTSQWLVTGFMLVNGVMIPLTAYLMDRIKTRPLYLAAMGTFLLGSIVAALAPNFG
                     VLMLARVIQAMGAGVLMPLMQFTLFTLFSKEHRGFAMGLAGLVIQFAPAIGPTVTGLI
                     IDQASWRVPFIIIVGIALVAFVFGLVSISSYNEVKYTKLDKRSVMYSTIGFGLMLYAF
                     SSAGDLGFTSPIVIGALIISMVIIYLFIRRQFNISNALLNLRVFKNRTFALCTISSMI
                     IMMSMVGPALLIPLYVQNSLSLSALLSGLVIMPGAIINGFMSVFTGKFYDKYGPRPLI
                     YTGFTILTITTIMLCFLHTDTSYTYLIVVYAIRMFSVSLLMMPINTTGINSLRNEEIS
                     HGTAIMNFGRVMAGSLGTALMVTLMSFGAKIFLSTSPSHLTSTEIKQQSIAIGVDISF
                     GFVAVLVMIAYVIAIFIREPEEIESNRRKF"
     gene            19928..20992
                     /locus_tag="O6Y56_001215"
     CDS             19928..20992
                     /locus_tag="O6Y56_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase"
                     /protein_id="HDB5574472.1"
                     /translation="MLTVDQVKELIGEIKDPIIDVPLKETEGIVEVSIKEEKEHVSVK
                     LAMAQLGGAPQLDLQMAVVNVLKENGAKTVGIRFETLPEEKVNQFKPKEENKPKTIEG
                     LLSQNNPVEFIAIASGKGGVGKSTVAVNLAVALAREGKKVGLVDADIYGFSVPDMMGI
                     DEKPGIKGKEVIPVERHGVKVISMAFFVEENAPVIWRGPMLGKMLTNFFTEVKWGNIE
                     YLILDLPPGTGDVALDVHTMLPSSKEIIVTTPHPTAAFVAARAGAMAKHTDHSILGVI
                     ENMSYFESKETGNKEYVFGKGGGTKLADELNTQLLGELPLEQPSWNPKDFAPSIYQSD
                     DRLGKIYSSIAQKVIAATNK"
     gene            21081..21267
                     /locus_tag="O6Y56_001216"
                     /pseudo
     CDS             21081..21267
                     /locus_tag="O6Y56_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500888.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         7161 a         2910 c         3904 g         7366 t
ORIGIN      
        1 tctgatgggt acatatttaa tatgttttta aattaacttt aactaaggag gtgtcgttag
       61 gggtgaaacg acttaaaaac tttatccttg gcttattaat agtagtaatc gtggggttcc
      121 tgttattcat gtatatccaa gatggacgta taactgaata tcaagactac ttccttcaat
      181 ttgaatggtt ccaaccatta cttatttcac ttgctgcact attgatatta ataggtctta
      241 tattagtatt tagtatcttc aaacctacgc atcgaaaacc tggattatac aaagacttcg
      301 atgatggtca tgtttacgta tctcgtaaag ctgttgaaaa aactgcattt gatacagttg
      361 caaaatatga ccaagtaaga caaccgaatg tagttgcaaa actatataac aaaaaaaata
      421 aatcttatat cgacattaaa actgactttt tcgtaccaaa taatgttcaa gtacaatctt
      481 taactgaagc aattcgtgcg gatattaaaa agaatgtaga atatttcaca gaaatgccag
      541 tacgtaagtt agaagttaat gtgagagatc agaaaacttc tggtccacga gtgttgtaag
      601 ggaggtatat catggctaac aatcataacc aaaacggaca agactctaca caacaagtga
      661 ttaatttttt aaaagtgttt aaatggagaa tcgttggttt cctagcgttt ctattaatcg
      721 cgatattatt cttaacgtta ggtttttgga aaacaatact tatcatcgtt ttatgtttaa
      781 ttggtgtggg tattgggtat ataaaagacc gtaagcaaga ttttatgaat tttttaaata
      841 gatggagtta attcatcaat ttagaattta attaaaaaaa tataaaaaaa acaataagtt
      901 aaaggagaat ctattatgac tgtagataac aataaagcaa aacaagcata cgacaatcaa
      961 actggtgtta acgaaaaaga aagagaagag cgtcaaaaac aacaagaaca aaatcaagag
     1021 cctcaattca aaaataaatt aacattctct gatgaagttg ttgaaaaaat tgctggtatc
     1081 gctgcacgtg aagttaaagg tatcttagac atgaaaggtg gcttaactga tacattcact
     1141 aatgcattct caagtggcaa caacgttaca caaggtgtat ctgttgaagt tggtgaaaaa
     1201 caagctgctg tagatttaaa agtaatctta gaatatggtg aatcagcacc aaaaatcttc
     1261 cgtaaagtaa ctgaattagt taaagaacaa gttaaatata ttactggttt agatgtagtt
     1321 gaagttaaca tgcaagttga cgatgtaatg actcaaaaag agtggaaaca aaaacacgaa
     1381 aaaaataacg aaaacaataa ccaagaaaga caaggtttac aataagttat tcgataaaaa
     1441 agctcggcac tcaatttaag tgccgagctt ttttgtgatt tttaataatt tgaatatggg
     1501 agatgcgtta tactctcatt tgtatagatt gtatttaata agttaatgta atccttgagt
     1561 tcatgattaa tgaaattcta taattttaat tattttctcg atacaaaggg ttattaactt
     1621 taatataagt ataatgatgt gcctcatctt caagacgcat tgtagtaaca cacttataat
     1681 ctataaatgg cgcgaacatg gtatctttaa tttcatttat gcgattctca tttacttgat
     1741 tagatttgtg tgtcgaaagt acaagttgat caaagatgtt atctagtaca tcacgaacga
     1801 tacaccacat atgtctttct aagtttgaat catttgatgc tttagagatt gtaagaatta
     1861 attcgcctaa atggttttga acggtagaat aaaaggcttt gttaaacaca gacgtttttg
     1921 aatcagtaag aattcttgat ttttcatgga aatgagatgt actgtatccc atatcattta
     1981 gttgtgcttt atcaattctt aaaccttcaa agtctctaat atacatcgtg tccaatagac
     2041 catcttttcg gaatgttgca atagcatttt gcaagtgagc ctctaatgca atgccatatt
     2101 tagtaactaa tgggattacg agaccaagca atgctttact ataagtttca acccacgatt
     2161 tcgccgatga ttcaaaatca gacaatgatg cagctgattg ataacgttta atcaatgtca
     2221 cgataggtga ttcattgtta aatgggtagg ttgcaactaa gcttgaagga atcattggtg
     2281 tgacttcttg tggaatcatt tggtatatgt tttttctaaa taatgtacct aattgttcac
     2341 ttcgttcagt ttgatagtct gcttcgtctt gctcattata aaaatgaata ccagcaactt
     2401 catcaataat tgttgatgca taggacttaa atatgacatc tttcttcaaa atatcattta
     2461 aaatacgtgt cattagtgga ccattgtgcg tcgtttgttc tgataatgta cgaatttcac
     2521 ctgtaatatg aacgtttgtc gacaatttga tgtgtggcga catagctggg tatttaggaa
     2581 ctaatgttct gaaagataaa ccagcataat aatccaacgt atgttttgct tcaatgatta
     2641 attctttatc tacttctgct tgataatcag aatgtaatac gtcatctaat tgccatggat
     2701 gtacaatcat aatgtgataa tcattaaagt taaactttgc cgtaaattca ttttctaatt
     2761 gtttaattaa gtccggaaat agttgatgaa cagttgtatc ataatcttta gacagtgaca
     2821 tagtacggct taatttactg tgaatcagta cgattttcaa cttaataggt tgattgaatt
     2881 ctgaagaata taggaatgtt tgtaatgcat ttaaaccttt acgtaattta gccccaggat
     2941 gtagcggatg accttcaata acggcttgct ctgaacgcaa gtaactatct tcgctatttt
     3001 cgataatatt aaataaaggt gcagaatcat gttgcattga cagtgcttga tagctaattg
     3061 caaatgtcat attagttgca ctgtttatta aatcttgctg aaattgatca ctagcagcat
     3121 tttttaaatc tggtgcttca attaaaatac actcaagaat ttcatttgga tggtgtactc
     3181 gtgtaatcgt atttgtaatg tcatccttaa tgtagaaagg gccttcaaca tcaattcgat
     3241 caaaggcgtg ttctccagtg ataggagcat ataatgtttg cttagcttgt gggaactgga
     3301 tttctagtat atgagtcgtt gagatatcta acataatcaa atcacgactc aatattttct
     3361 tactttgagt gcgcgcttta actaagtttt cgcgatgcat tgatgtgact aatctctgag
     3421 tgactttatc tcttccttgt aaaatcatct ctttaaaaat attagcccaa tcgttattat
     3481 gttgttgtaa aaataaatat gtttcttgtt cttctttgtt aaattttaat gtctgttctt
     3541 taaaaattaa gttcaagttc ataattcacc tctatgaaat attttacaaa agcaagatag
     3601 atttgtataa tccatattaa tgataatgat tcttattatc aacagaatgc gggtgtaagt
     3661 tttatgacaa aatatttttt tagcagttct tttctactat ttctaggtaa ttggattgga
     3721 caaatagggc taaattggtt tgtgcttacc acttatcata acgcagttta tctggggatt
     3781 gtcaattttt gcagacttgt accaatatta ttactaagtg tgtgggcagg ggcaattgcc
     3841 gataaatatg ataaagggcg attgctgaga attacaattt catcatcatt tttagtaact
     3901 gcaattttat gtgtgcttac gtatagtttc actgcaattc caattagcgt cattattata
     3961 tatgcgacat taagagggat tttaagtgcg gttgaaacac ctttaagaca agcaatctta
     4021 ccagatttat cagataaaat atctactaca caagctgtat catttcattc attcatcatt
     4081 aatatttgtc gttcaatagg gcctgccatt gctggtgtca tattagcagt ctatcatgcg
     4141 ccaacaacat ttcttgcaca ggcaatttgt tattttatcg cagttttatt atgtttacca
     4201 ttacatttta aagtaactaa aatacctgaa tatgcaacaa gatacatgcc gttaaaagtc
     4261 attatagatt acttcaaatt acatatggaa ggtcgacaaa tatttataac atcattattg
     4321 attatggcga caggtttttc atatacgaca cttttaccag ttttgacaaa caaagtattt
     4381 ccggggaaat ctgaaatatt tggtatcgct atgacgatgt gtgccattgg tggtattatt
     4441 gcaacgctag ttttacctaa agtacttaaa tatattggta tggtaaatat gtattattta
     4501 agttcattat tatttggcat tgctttgtta ggtgtggtat ttcacaatat tgtcatcatg
     4561 ttcatttgta ttacattgat tgggttattt agtcaatggg cacgtacgac aaatcgcgtt
     4621 tattttcaaa ataatgttaa agattatgaa cgtggtaaag tactgagtat tattatgatg
     4681 gatagaggta tgattccatt gggaagtctg ttaatgagta tatgtgcaga tgtgtttggc
     4741 attgttagaa ctttttcaat aatgggaata agtactatat gcattacaat ggtattctat
     4801 tttataaata gaaagttgaa gttaaagttg gaggaaagta atcatggtat atcttgaatg
     4861 ggcaaaggca gatagaaata ttcaatatcg tgtaattaac gccattatta aagaacgtat
     4921 ttaccccgag caaacattta tttcacaaaa agaatcttta attgaaattc agtatcatat
     4981 gcatgtgttg actattgaag ttgttagaaa aagtgcatta gaacgctatg agtttacagg
     5041 tgatattact tatttaaata aaggtgaaac gtcattaatt ataactttag aaggtttgtt
     5101 agatgtgttg aatcatgact ttgatatccc tatttcagag cgactacgcg aagagttaat
     5161 acacagtcga gatagtttag ttgaaacata taagcaaatg tctcacagac aaacattaat
     5221 aagtcaaagt tttaaatttt caagattacc acaagatatt aacttttttt catggttaca
     5281 acatgtaaaa gatagtgata agacagatga tttaacttat tctgagagtt tggtaccaga
     5341 ggggcatcca acacaccctt taaccaaaac gaaattgccc ttaactatgg aagaagtacg
     5401 agcatatgca cctgagtttg aaaaagaaat ccctttgcaa attatgatga ttgaaaaaga
     5461 ccatgttgtg tgcacagcta tggatggtaa tgatcaattt attattgatg aaataattcc
     5521 cgaatactac aatcagattc gtgtgttttt gaagagttta ggtttgaaaa gtgaagacta
     5581 tagagcgatt ttagtacatc cttggcaata tgatcatacg atagggaaat attttgaagc
     5641 atggattgct aaaaaaatat taattccaac gccgtttaca atactttcaa aagcaacttt
     5701 atcattcagg acgatgtctt taattgataa accatatcat gttaagttgc ccgtcgatgc
     5761 acaagcaaca agtgccgtta gaacagtctc aactgtgact actgtagatg gaccaaagtt
     5821 aagttatgct ttacaaaaca tgttgaatca atatccagga tttaaagttg ctatggaacc
     5881 gttcggtgaa tatgcaaatg ttgataaaga tagggcacgt cagcttgctt gtattataag
     5941 acaaaagcct gaaattgatg gaaaaggtgc aacagtagtt agtgcaagtc tagttaataa
     6001 aaatccaata gatcaaaaag ttatcgtgga tagttactta gagtggttaa atcaaggaat
     6061 tactaaagaa agtattacga catttattga acgatactct caagcattaa tcccgccttt
     6121 aattgctttt attcaaaatt atggaattgc attagaagca cacatgcaaa atacagtagt
     6181 gaacttgggg ccacattttg acattcaatt tttagtgaga gatttaggtg gttctagaat
     6241 tgatttagaa acattacaac atcgtgtatc agatattaaa attacaaatg atagtttaat
     6301 agctgattct atagatgcag tgattgcaaa attccaacat gctgttattc aaaatcaaat
     6361 ggcagaatta atccatcatt ttaatcagta tgattgtgtt gaagaagccg aattatttaa
     6421 catagtacag caagtagtag cgcatgccat taacccaaca ctaccacatg caaatgagtt
     6481 aaaagatatt ttgtttggac caacaatcac tgtcaaagcg ttgttaaata tgagaatgga
     6541 aaataaagta aagcaatatt taaatattga gttagataat ccgataaaaa aagaggtgta
     6601 gtactacatg gcacacgtta acataaatat atcgaagatt aaatataacg ccaaagtact
     6661 tcaaacagtt tttcaaagta aaaatatgca attcacacca gtaattaagt gcatagctgg
     6721 tgaccgtaca attgtagaaa gcttaaaagc gttaggtatc aatcatgttg cagaatccag
     6781 attggataac ataattagta ttgcagatca ggatttaaca tatacgttat tgcgtacgcc
     6841 tgccaaaaaa gagatttcag atatgataga aaaagttgat atgagtatcc aaacagaatt
     6901 atctaccata catcaaataa atgaagtagc agaagtttta ggaaaaaaac ataagatttt
     6961 attaatggta gattggaaag atggccgtga aggtgttctg acttatgatg ttttagatta
     7021 tattaaagag attattcact tgaaaaatat tcattttgtt ggtttagcat tcaattttat
     7081 gtgttttaaa tctgatgcgc caagtgatga tgatatcttt atgattaatc gattcgtctc
     7141 agctgttgaa agagaaatag gatatcgatt gaaaattatt tcaggcggta attcgagcat
     7201 gttaccacaa cttttatata atgatttggg taaaataaat gaattgcgaa taggtgaaac
     7261 gttgtttaga ggtgttgata caacgacaaa tcaagcgata gctatgttat atcaagatgc
     7321 gattacattg gaggctgaga ttttagaaat taaacctcga gttaatacac aaacgcatga
     7381 atcattcata caagctattg tagatattgg ttatttagat acaaaagtcg ataatatttc
     7441 acctatggat cagcatatca atattttagg cgcttcgagt gatcatttaa tgcttgattt
     7501 aaatggtcaa ggacactatc aagttggaga tcatatatct ttttcattaa attatgaagc
     7561 actttctcat tcgatgtata tgaaaaattt acataaggta tatattgatg attcaaagat
     7621 tgatacgcta cttcaaaatt ttgatgtgaa atctcctgct atggtaaacc aatattaata
     7681 tatttatcaa taagtctaag ttgactagtt atactacata tcgtttacac ggttgtatca
     7741 taattgttca acttagattt tttgtatttg ttgatttatc aatttaagtg taacagttcg
     7801 tcacataaaa aatgcaacag gtaataacag ctgaattaca gggataacga tcatgctaaa
     7861 tggtgtcaat tgtattaatt caaagatgat atagccatga tacattatca gtattttgtc
     7921 taaggaaatg tgctaattgt agtcataatt actagaggga atatatagtc atacatttta
     7981 gtaatataaa aagattgaac actacttgac aatgataatt gttatcaata aaataataaa
     8041 tgaagttata catattaagg agtggaacga tgagaggtct aaaaactttt ggtatattgg
     8101 gattaatagt tgccttattt ttagttgcag cttgtggtaa tacggataat tcaagtaaaa
     8161 aagaatcatc aactaaagat actatttcgg taaaagatga aaatggtaca gtaaaagtac
     8221 ctaaagatgc aaaacgtatc gttgtattag agtactcatt tgcagatgca ttagcagcat
     8281 tagacgttaa accagttggt attgctgatg atggtaagaa aaaacgtatc attaaaccag
     8341 ttagagaaaa aattggggat tatacttctg taggtacacg taaacagcca aacttagagg
     8401 aaattagtaa attaaaaccg gatttaatta tcgctgatag cagtagacat aaaggtatta
     8461 ataaagaatt aaacaaaatt gcaccaacat tatcattaaa gagttttgat ggagactaca
     8521 aacaaaacat taattcgttc aaaacaattg ctaaagcttt aaataaagaa aaagaaggcg
     8581 aaaagcgtct tgctgaacat gataaattaa tcaaaaagta taaagatgaa attaagtttg
     8641 atagaaatca aaaagtgctt ccagcagttg ttgctaaagc tgggttatta gcacatccaa
     8701 actattcata tgttggacaa tttttaaacg aacttggatt taaaaatgca ttaagtgatg
     8761 atgtaacaaa aggtttaagt aaatacttga aaggacctta cttacaatta gatactgaac
     8821 atttagctga cttaaatcct gaacgcatga ttattatgac agataatgct aaaaaagatt
     8881 ctgctgaatt caagaagtta caagaagatc caacttggaa aaagttgaat gcagttaaaa
     8941 ataatcgcgt ggatattgtt gaccgtgatg tttgggcaag atctcgtggc ttaatttctt
     9001 ctgaagaaat ggctaaagaa cttgttgaat tatcaaaaaa agaacaaaag taaggtggaa
     9061 gtaaatggct ataaaagaaa taagtagcca atctgccata gattataaaa gaaaaagacg
     9121 cacaacactc acgtatatag tgagtttgtg ctttcttttt atttgtatat atttaaatat
     9181 ggcgattggt tcttcgaaaa ttaattttag cgatatcgtt cactatgtta ctggtcatac
     9241 agatacgaaa gcaacgtttt tattgcataa cgtacgtatg ccaaggatga ttgcaggatt
     9301 atttattggc ggtgcattag cggtatctgg tttgttaatg caagcaatga cacgcaatcc
     9361 gctcgcatca cctaaaattt ttggtgtcag ttctggtgca tcgtttttca ttgtatttgt
     9421 gacgattatc attccatcat tagaatatta tgcattatat ttaggtgtaa taggtgcatt
     9481 tataggtggt ttaactgttt atacactttc aggtgctacg aaaggtatga caccaattaa
     9541 attagcattg gctggtatgg ccatccattt gttttttagt agtatgactg aaggtattat
     9601 tattttgaat gagaattcaa acgaacaagt gatgttttgg cttgtcggtt cattatccag
     9661 tatgaagtgg gatgaaattt taaccatttt accatggatt attggtgctt taattgtaac
     9721 gatttttatt ggacgtcaac taacgataat ggaactaggc gatgacattg ctaaaggatt
     9781 gggtcaaaat ataaataaag ttagaattat cattggacta ttagtcatta ttcttacagg
     9841 tatgtcggtg tcagtggcag gaccaattgg atttgttggc ttaatcgtac cgcatatagt
     9901 caaacgctat gtgagtaaga attatttagt catgattcca ttaacattta ttataggtgc
     9961 agatttgtta ctactatcag atgtattaag tcgtttaatt acatatcctt atgaatcacc
    10021 tgtagggatt gttacatcat tcgtaggtgc actttacttc ttatttataa cgattagagg
    10081 ggtgaaaaga atatgatgac aacgaaaatt atacgtcgtt atagtttaat cacaatcctt
    10141 ttaattgtga gtatattcat aagtttatgt gtagggtctg tcatgattca tccgattgat
    10201 gctattaagg gaatatttac acaagatgat tttattttaa atgagtatcg tatacctaga
    10261 acattacttg gtattattat cggtagtagc ttggctatat caggtgcaat tatacaagct
    10321 gtaataagaa acccgttagc ctcacctgat gttataggta tttctaaagg tgccagttta
    10381 gctgctgtaa ttattattat gatctttcca acagcacctt tgtttgtatt acctataggt
    10441 tcattctttg gtgcctttgc agtaagttta tttttatcat ttttaatttc aaaatatgat
    10501 gttaaaggtt caaagcttgc cttaattggt ttagcaatag gcgcaatatg tacggcgatt
    10561 gtgcagttct tattaatcag aaatccactg gaagcaaaca aagcgcttgt ttggttgaca
    10621 ggtagtctat atggtcatga tatgtcgaat atttatacta tattaccttg gtttttaata
    10681 acgataccaa tcatcatttt attgagttat caattagatg tattgaatct aggtgatgct
    10741 gttgcaaccg cactcggttt aaaagttaaa acgattaaaa tgatattgct aattttagca
    10801 gtaatattag ctggatccgc aatttcagtt gtcggtggta ttagcttttt aggattaatt
    10861 gcacctcata ttgcgagaca gttaatagga aataaaacat tacacgttat tatcatgtcg
    10921 gggttaattg gtgctatatt gttaacattt ggagatggtt tagcccgtgg cattcatccg
    10981 ccactggata ttcctgtagg ggttatcatt gcaattatcg gtgcaccata cttcttaata
    11041 ttattacgaa gaatgaaata actaacatat gattagagtt aaaaaaggtt aagtacgaaa
    11101 tcagtaattg tacttaacct tttttgaatt caccttgaaa aattacaaga aatagcgtat
    11161 atttaataac tgtaattatt cattattttg catacataaa cattttgaag gatagaatga
    11221 taaggaatat gtttgttaac tgaatagaat tctgtatata cttaaaacga atacatagag
    11281 aaatggattg attttatgga tagcttttca aggaaagaga taatcattgg gagacttaag
    11341 tttattacga tgtctttaat tggtatctta ttatttctag taccaattcc agtcgaacaa
    11401 gatggacaga agcaaacaac gttgcccgtg gcatttttag caggcgtgct taaagatgta
    11461 ttaggtggcg taatgccatt tttaattgtg acgataatta ctttatcggg tatcataacg
    11521 ctgatttgtt caactatttt aaaagacaaa ttgaaacctg acgggctaat gaacaatgct
    11581 tttaacgtta gaattggttg gttaatttta cgaatattag cagttgtttt tgcatggatg
    11641 acatttttac gaattggttc aaaggttatt tactcagatg aaacgggggg attattgttc
    11701 tcaagtttat tgccaacatt agtggcagta ttcttatttg cagctctatt tttaccgcta
    11761 ttaatggaat acggtttgtt agagatgttg ggtcctattt ttagaccggt tatgagacct
    11821 ttatttacat tgccaggacg ttcgacggta gataatttag catcatttat tggagacgga
    11881 actgttgggg tcttaattac aagtagacaa tatggtgaag gatattattc tcgtcgtgag
    11941 gcaacagtta tttcaacgac atttagtgta gtttctatca cctttgcaat tgtagttgct
    12001 gaaacagtgc acatgcaaaa tcaatttttt gctttctatt tatcagtgat agtatcctgc
    12061 ctcgttgcag cagtcattat gccaagaatt tggcctttaa ataaaattcc tgatgagtat
    12121 gctaaggagg tacctgaaag tgcgcgtact gaggcattgc cagaaggaaa gacggcattg
    12181 agacatggct ttgatactgc aacagaagta ggtattaaag caccgggcgt tatagacttt
    12241 tttaagtcag gattaaaaac agtcgttgat atgtggtttg ttattttgcc tgtagtgatg
    12301 agtattggta ctattgctac cattattgcg aactacacgc ccttttttgt catattgggt
    12361 aaaccttttg ttccattttt agagttaatg caaatacctg aagcggcaca ggcttctcaa
    12421 acgattatta tcggttttgc cgatatgttt ttaccttcta tattaattga aggtgtacaa
    12481 aatgatataa ctcgttttgt aattggagca cttagtatat cgcagttaat atacttgtct
    12541 gaagtaggtg gcgtcatact tggttcgaag attcctgtaa gcatcggcaa attgtttatg
    12601 attttcttga ttagaacaat cattacacta ccgattattt ctttgatggc acacttgtta
    12661 ttgtaattag atatagaaaa ggacaactgt taaaattgtg gaaacagttg tccttttgta
    12721 tttgtttatg ctgggtgttg aatcaattaa aaaaatcatt catgaagccc tcaccatgaa
    12781 tgattttttt atacaattta tttagttaat tcattgtaaa ctttttgatc attttgagta
    12841 taaataatgt attcgtggtc ttcagtatcg ataataacgc gattcgtttt accaaatgtt
    12901 gagccgattc tagatacatc tttgctgtct aatttaggaa ctgcatgaat atcttggtct
    12961 tgtgttatat ttttaatttc acttgtagga attttgatat cagcaactct ccattgaata
    13021 cgcacttcat tattatcctt ttttactgtc attgccatta ttcaaacaca tcctttaaat
    13081 attttgtaaa tacatcataa acgattttgt aatcgttttc aagagtttat gtgatacttt
    13141 tttaaattgt gtcatactaa tgaagtttaa cccgaagata tgttcgtgtt tttgttaggg
    13201 atatggtaaa atgtgagtat taaaggagaa caaatatgac aggtaaaaca catgcttcat
    13261 gcggcatgct cgttggagcg ctaacaacac aatattttca aacggatatt ttttcgtcgg
    13321 ttacggttat cattctagca actctagcta gcttatcacc cgatatatgt cacactcaaa
    13381 gtaagattgg cagaaggttt aaggtaatta gtttttttgt gagattgatc tttggacatc
    13441 gaacctttac gcattcaata ttatttatcg taatcatagc atttttattg caaattattc
    13501 agacgcctaa ttattatatg gtagcaatta taattggatt agtgtcacat gttatactag
    13561 atatgataac accaaaaggc gtgaaattat tttatccgtt accgtttaat gtgaagacac
    13621 caatccaatt taaaacaggt ggacttgtag acttatcttt agctactgcg ttaatggtcg
    13681 gaacagttta tgttttattt cagcctttca tcaatgatat aataagcaac tggaatacta
    13741 agtttttata gaaaataaat tattaaaggt tacaaactca gcaggaggca taaaatgcta
    13801 gataaaaatc aattagctaa atataaacaa gatcatttat gtgaatatga aaaaataatg
    13861 agtaacaatg aaaaagaagc gcttgaagag aaggtagcgt cattagattt agattttatt
    13921 gccaaattat ataacgattt atacatcaat aagaaaacaa tagatgatgt atctgcagtt
    13981 tctgaagtga aatatggtat taaatcacaa atgagtgatg atgagattaa gcgtttagag
    14041 gaacaaggac ttcaagctat taaagaagga caatttgcag tacttttgat ggcaggtggt
    14101 caaggaacaa gacttggtta caagggacct aaaggttcgt ttgaaattga aggtgtaagt
    14161 ttatttgaac ttcaagctaa ccaattaaaa acattgaatc atcaatctgg acatacgatt
    14221 caatggtata ttatgacaag tgatatcaat catgaagaaa ctttagctta tttcgaagca
    14281 catagttatt ttggatatga tcaagaagca atccatttct ttaaacaaga taatattgtg
    14341 gcgcttagtg aagaaggaaa gttaatttta aatcaacagg gtcgtattat ggaaacgccg
    14401 aatggtaatg gtggcgtgtt taaatcttta gacaaggcag gatacttaga agaaatgtct
    14461 aataatggcg ttaagtatat tttcttgaat aatatcgata atgttttagt aaaagtgttg
    14521 gatccactat ttgcaggatt tacggtagaa cataattacg atattacttc taaaacgatt
    14581 caaccaaaac caggagaaag tgttggacga ttagttaatg tcgattgtaa agatacagta
    14641 ttggagtatt cagaattaga tccagaagtt gcaaatcaat ttaacaatgc taatatcggt
    14701 attcatgcat ttaaacttgg ctttatttta aatgctgtaa atcgtgaatt accttatcat
    14761 ttagctatta agaatttgaa gcaattagat gagaactttg gggttattga acaaccaact
    14821 ttaaaattcg aattgttcta ttttgacata tttacttatg gaactagttt tgtcacgtta
    14881 caagttccta gagaagaaga gttttcaccc cttaaaaata aagaaggtaa agatagtgtt
    14941 gcaacagcaa ctgaagattt acgtagaatg ggtttaattt aatgttaggc ggtgactatg
    15001 atgtccaaat caagtaaaaa aagtaatgac acaattgcag aaacatttaa ggatatcatt
    15061 ccattgtcat ttggagaaga aataggcaat gctgcatctc atgggctggc agcgctgtta
    15121 acactattag tcttacctta tgcggctgta catagttata ttgcaaatgg cacacttgca
    15181 tcagttagta tgtcaattta tgttatttct atctttatga tgtttatttc atcaacaatt
    15241 tatcactcta tgcaaaatga aacaccccat aaatatattt taaggattat tgatcacagt
    15301 atgatttacg tagcaatttc aggtacatac actcctattt tgttaacaat tgtaggtggt
    15361 tggataggtt ggacagtatt tattttatta tggggaacga ctctttgggg aattttatat
    15421 aaatccatag ctgtcaaagt taatcaaaag ttaagtttaa ttgtctattt agtgatgggc
    15481 tgggtaggta ttatcttgtt gccaattatt tttattcgca catcatggat attcatatta
    15541 ttcattttct taggcggtgt gtcatataca attggtgcat ggttttatgc acaaaagaat
    15601 agaccatatt ttcatatgat ttggcatatt tttattgtta tagcatcact attgcattta
    15661 attgcaatct tatattttat gtagtcgttt agaaaaggtg ggggaaactc cgcttttttt
    15721 attacataaa tcattctatt aggggattgt attgtaataa aattatcgtt aagctttgaa
    15781 agtcaaaagt gtttatacat ataaaaatca atagtttgta aataaaatct tataaatata
    15841 tagaaggagg tatttcatgc gattaaagtc aatcataact gttatagctt taatattaat
    15901 tatgtttatg tctgcgattg aatcatctat tatttcgctt gcattaccta caattaaaca
    15961 agatttaaat gcaggaaatt taatttcatt aatttttacc gcgtatttta tcgcattagt
    16021 aattgcaaat cctatagtgg gcgaattact ttcgagattt aaaattattt atgtggcaat
    16081 tgcaggatta cttttattta gtataggtag tttaatgtgt ggtttaagta ctaattttac
    16141 tatgctaatt atatcacgcg tgatacaagg ttttggatca ggtgtattga tgtcattatc
    16201 gcaaattgtt ccaaagttag catttgaaat tccgttacga tataaaatta tgggcatagt
    16261 tggcagtgtt tggggtattt ctagtatcat tgggccactt ctaggtggcg gtatattaga
    16321 atttgcaaca tggcattggt tattctacat aaatataccg attgcgatca ttgccattat
    16381 attagttata tggacatttc attttccaga ggaagaaaca gttgctaaat caaaatttga
    16441 tactaaaggg ctcacgctat tttatgtatt tattggattg attatgtttg ctttattaaa
    16501 ccaacagcta ttacttttaa atttcttaag ttttatctta gctatcgttg tggcaatacg
    16561 tttatttaaa gtagaaaaac atgtttcttc accattttta cctgtggttg aatttaatcg
    16621 ttcgattact ttagttttta taactgacct tctaacagct atttgtttaa tgggattcaa
    16681 tttatatatt ccagtctacc ttcaagaaca actaggatta tctccattac aaagtggatt
    16741 ggttattttt cctttatctg tagcttggat tacattgaat tttaatttac atcgaattga
    16801 agcaaaacta tcaaggaaag ttatttactt actatcattt acgttgctac tagtaagtag
    16861 tattatcatt tcatttggta ttaaactgcc gttacttatt gcatttgtat taattttggc
    16921 aggattaagt tttggatata tttatacgaa agatagtgta attgtccaag aagaaactag
    16981 cccattacaa atgaaaaaaa tgatgtcatt ttatggatta actaaaaatc ttggggcatc
    17041 aataggttca acaataatgg gatatcttta tgcgatacaa tcagcaatct ttggtccaaa
    17101 cttacacaat gtgttaagtg ctgttgctgt aattagcact gggcttattg ttttatgggt
    17161 cgtatttttt aaagaacagt tatctcaatc aaaagaatag aattatgatt aaaattgatg
    17221 tagtgtaatt aaagtaagaa ataataaatt tactagatgc tagataaatc gttcaatatt
    17281 ttattaataa ggaggccaat gattgtgaat tatcttaaac ataagtttta taacttgtta
    17341 actacaatga ttgttctctt tatttttgta ctttctggtg cgattttttt aacatttcta
    17401 ggctttggtt tatatggatt aagtagaata cttatttatt ttaggttggg tgactttaca
    17461 tataatagaa gtatgtacga taacctattg tattatggca gttatataat ctttgggtac
    17521 ttcatcatat ttgcagtcga gcatttaatg gattatttta gaaaaatgtt gcctgaaaat
    17581 gcatatttta gaggcgcgac ttttcatttg atttcttaca cagttgcaac aacgttattt
    17641 tatttcatca ttcatttaaa ttatgtttat atcaatatcg atttttgggt aatcatggtt
    17701 attatagggt tcttatatgt ttgtaagctt caattttacc ctgaaagtaa aaatttaaat
    17761 aatagaaaat agatatctga agttgagtgc acatatgtgt tccaacttct ttttgttcaa
    17821 tagaacaatc gataatagtg agtcttagtg ctcaatttgt ggtaaataag ttaaataacc
    17881 attgtatgag tctgagacat aaaataagtt attaggcgct acaatgttat attgttagtt
    17941 ttttaagtca ggctgggaca taaatcaatg ttctatgctc tacgtagtta tattggcagt
    18001 agttgactga acgaaaatgc gcttgtaaca agcttttttc aattctagtc ggggccccaa
    18061 cacagaagct ggcggaaaac cagcttacaa taatgtgcaa gttggggtgc ggggccccaa
    18121 caaagagaaa ttggattccc aatttctaca gacaatgcaa gttggggtgg gacgacgaaa
    18181 taaattttgc gaaaatatca tttctgtccc actcccaaga accaataatg atttaatatg
    18241 tagtgcttct ttatcatttg agtactactc ccattatgtt aatggctata tgtattaaaa
    18301 ggacaagtgt atatctgttt aaaaaggagg aattatgatg gctaaagttg aattaacaac
    18361 ccggagacga aacttcatag ttgctgttat gttgattagt gcgtttgtag ctattttaaa
    18421 tcaaacatta ttaaatacag cgttacctag tataatgaga gaattaaata ttaatgaaag
    18481 tacatcgcaa tggctagtta ctgggtttat gcttgttaat ggcgtcatga tacctctgac
    18541 ggcatatcta atggatagga ttaaaactag acctttatac ttagcagcga tggggacatt
    18601 tttattaggt tctattgttg cagccttagc tccgaatttt ggagttttaa tgttagcacg
    18661 tgtaattcaa gcgatgggtg caggggtact tatgccctta atgcaattta cgttatttac
    18721 attgttcagt aaagaacatc gaggttttgc aatggggctg gcaggtttag ttattcaatt
    18781 tgcaccagca ataggaccta cagttacagg attaatcatt gatcaagcga gttggcgagt
    18841 accatttatt ataattgtag gaattgcttt agttgccttt gttttcggtt tggtttcaat
    18901 ctcgagttac aatgaagtga aatatactaa attagataag cgctcagtaa tgtattcaac
    18961 tattgggttc gggttaatgc tatatgcatt tagtagtgca ggagatttag gatttacaag
    19021 tccaatagta ataggtgcat tgataataag tatggttatt atctatttat ttatacgtag
    19081 acaatttaat attagtaatg cacttttaaa tttaagggtt tttaaaaata gaacatttgc
    19141 attatgtacg ataagttcaa tgattattat gatgtcaatg gttggacccg cgctgcttat
    19201 accgctatat gttcaaaaca gtttatcttt atctgccttg ttatcaggac tagttatcat
    19261 gcctggtgca ataataaatg gatttatgtc ggtttttaca ggtaaatttt atgataagta
    19321 tggtcctaga ccattgattt atactggttt tacgatttta acaattacta ctattatgtt
    19381 gtgtttcttg catacagata catcttatac gtatttaata gtcgtatatg caattagaat
    19441 gttttcagtt tctttactca tgatgccgat aaatactaca ggaattaatt ctttgagaaa
    19501 tgaagaaatc tcacatggca cggctattat gaactttggt cgtgtaatgg ctggttcact
    19561 aggcacagct ttaatggtta cattaatgag ttttggtgca aaaatatttt tatcaacttc
    19621 accatcacac ttaacttcaa ctgagataaa acaacaatcg attgctattg gagtagatat
    19681 ctcatttgga tttgtagcag ttctagttat gattgcttat gtgatagcaa tttttatcag
    19741 agaacctgaa gagattgaaa gtaatagaag gaaattttaa aataatatga gtagttggtc
    19801 tattgaaaat aataggctaa cttctttttt tatttaatga aaagttttat acttttattg
    19861 atagactacg taaaaaatga catttgcaat tatgtagata ttttaaattg attaaggggg
    19921 atttactttg ttaacggtag atcaagttaa agaactaata ggagaaatta aagatcctat
    19981 tatagatgta cctttaaaag aaacagaagg tattgtagaa gtttctatta aggaagaaaa
    20041 agaacatgta agtgttaaat tggcaatggc acaattaggt ggtgcaccgc aattagattt
    20101 acagatggca gttgttaatg ttttaaaaga aaatggtgca aaaactgtgg gtatacgatt
    20161 tgaaacgtta ccagaagaaa aagtaaatca atttaaacca aaagaagaaa ataaacctaa
    20221 aacgatagaa gggctgttat ctcaaaataa tccagttgaa tttattgcta ttgcttcagg
    20281 taaaggtggc gtcggtaaat ctactgttgc agtaaattta gccgttgcct tagcccgtga
    20341 aggtaaaaaa gttggattag tagatgccga tatatatgga tttagtgtac cagatatgat
    20401 gggtattgat gaaaagcctg gaattaaagg gaaggaagta attccagttg aacgtcatgg
    20461 cgttaaagtt atatcaatgg ccttttttgt ggaagaaaat gcgccagtta tatggagagg
    20521 gccaatgtta ggtaaaatgt tgacgaattt ctttacagaa gttaaatggg gaaacattga
    20581 atatttaata ctcgatcttc cacctggaac aggagatgta gctttagatg ttcatacgat
    20641 gttaccttca agtaaggaaa ttattgtaac gacacctcat cctacagcag catttgttgc
    20701 agctcgcgca ggtgcgatgg caaaacatac ggatcattct attcttggcg taattgaaaa
    20761 catgagttat tttgaaagta aagagacggg taataaagaa tatgtctttg gcaaaggtgg
    20821 cggtactaag ttagctgatg aacttaatac tcaattactt ggggaattac ctttagagca
    20881 accatcttgg aatccaaaag attttgcacc gtcaatatat caatcagatg atcgtctagg
    20941 taaaatttat agctcgattg cacaaaaagt tatagctgct acaaataaat aggtataata
    21001 tatgctaaac gtacaaaatt acttttattt tgtacgtttt tatattgaat tgttttagaa
    21061 tgctggtaaa ataagttctt gtgttaagca atcaacgcat tgaaaaaaga agcggcttgc
    21121 aaacacgaat gtttttcaaa aaagttattg actttaaatt ataaagttga taagataata
    21181 aagtcgtcaa aaacggcggc gatgttttta aagaagaact tcaaaagtgt aaaacttacc
    21241 attgaaataa ctataaaaac aatatagaat aaataaagta atcgttcaaa aagttattga
    21301 cttcaacaat taaacgaagt acaataaaag agattgaaca t
//
LOCUS       DALMNS010000037        21259 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.037, whole genome shotgun sequence.
ACCESSION   DALMNS010000037 DALMNS010000000
VERSION     DALMNS010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 21259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21259
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.037"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(29..1417)
                     /locus_tag="O6Y56_001217"
     CDS             complement(29..1417)
                     /locus_tag="O6Y56_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HDB5574473.1"
                     /translation="MNAFLTLINIIVLVIFIVILHMMARKHISFAKRVFTALGIGIVF
                     GVLLHLAYGTHSNVITSTSDWFNIVGQGYVALLQMIVMPLIFISIVAAFTKIQIGEKF
                     AKIGSLICIFLIGTVTIAAIVGVVYALVFGLDASTINLGNAEQARGSEIAKQAKDLTA
                     HTLPQQILELLPKNPFLDFTGQRATSTIAVVIFASFIGFAYLRVARKQSDHGELLKRA
                     IDAIYSLVMAIVTFVLRLTPYGVLAIMANTLSTSDFGAIWTLGKFLIASYAALITMYI
                     IHLVILSLLGISPIRYVKKTLEVLIFAFTSRSSAGALPLNIQTQTRRLGVPEGIANFA
                     ATFGLSIGQNGCAGIYPAMLAIMVAPVANVEIDLQFIVTLIAVVIISSFGVAGVGGGA
                     TFASILVLSTLNLPVALAGVLISVEPLIDMGRTALNVNDSMLAGTGTAKLTKHWDKDT
                     FESNDNAALTSH"
     gene            1502..1603
                     /locus_tag="O6Y56_001218"
     CDS             1502..1603
                     /locus_tag="O6Y56_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574474.1"
                     /translation="MQLNVNMMKFDRWHKGICKQIVLNSVVIGGKGK"
     gene            complement(2393..3349)
                     /locus_tag="O6Y56_001219"
     CDS             complement(2393..3349)
                     /locus_tag="O6Y56_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574475.1"
                     /translation="MLTKEFAQRVELSEKQVRKIVQHLEERGYQLSKTEYRGREATDF
                     KEEDIELFKDIADKVKQTNSYDLAFDELEKEKDFLQVIVKNDDKNLPTNQNVAQLVED
                     LRLEIQKMRQERHLLGQMMNQVHQQQQELKELQNQLTTKIDSNSESLKAIQTSQEAIQ
                     EAQASQAKVLAESTNKVESNAVTEDKADSKDSKVAGVNTSTDAKTDTKAENAGDGTAT
                     KVDKEDQISATEAIEKASVEQSKNDKAAETSNKEATVDAEAQHDAEQQVAEAHVEASK
                     QATSNDSSEAKAENDSTASQSEMAEPKPQEEKKGFFARLFNL"
     gene            complement(3467..4129)
                     /locus_tag="O6Y56_001220"
     CDS             complement(3467..4129)
                     /locus_tag="O6Y56_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574476.1"
                     /translation="MEFKTIQSVKDPHYNEALKLYDTKLNLSLTEDKRIIKRSLENNK
                     TENDYVFIVGLENDVVVSLATAHYEATTNSAFLIYLFAKDLPNHDELMTQTLHQIEHE
                     LNLLSNLVHSRSINFLMMEVPKEPADLTQNNGLIIEHRRHFLYEHQFERQTEIDYIHP
                     TNDGHTKKVDLFLKKNIKLTKDIYGTSVKSNYILKYVFANGIAREIIYALLEEMDLRK
                     PF"
     gene            complement(4272..4679)
                     /locus_tag="O6Y56_001221"
     CDS             complement(4272..4679)
                     /locus_tag="O6Y56_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HDB5574477.1"
                     /translation="MADITVVNDTGELYNVINQKKSEGYLESELTIISKSKLHLNDLH
                     DSEISLISTSGTFSDRMTKLLTGEDGEHAVLSRYNLAPDELEKYKQLILDDKMLVVAV
                     RDKSSHQEVQENNSAYEEIDITHFAEASKGPKA"
     regulatory      4859..4961
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00167"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="purine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="guanine and/or adenine"
                     /db_xref="RFAM:RF00167"
     gene            5192..5770
                     /gene="xpt"
                     /locus_tag="O6Y56_001222"
     CDS             5192..5770
                     /gene="xpt"
                     /locus_tag="O6Y56_001222"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDB5574478.1"
                     /translation="MELLGQKVKEDGVVIDEKILKVDGFLNHQIDAKLMNEVGRTFYE
                     QFKDKGITKILTIEASGIAPAIMAALHFDVPCLFAKKAKPSTLTDGYYETSIHSFTKN
                     KTSTIIVSKEFLSEEDTVLIIDDFLANGDASLGLYDIAQQANAKTAGIGIVVEKSFQN
                     GHQRLEEAGLTVSSLCKVASLEGNKVTLVGEE"
     gene            5770..7038
                     /locus_tag="O6Y56_001223"
     CDS             5770..7038
                     /locus_tag="O6Y56_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000793018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HDB5574479.1"
                     /translation="MKNLILSVQHLLAMYAGAILVPIIVGTSLKFTPEQIAYLVTVDI
                     FMCGVATFLQANKVTGTGLPIVLGCTFTAVAPMILIGQTKGIDVLYGSLFLSGILVII
                     IAPFFSHLVKFFPPVVTGSVVTIIGINLMPVAMNYLAGGQGAKDYGDVKNILLGLMTL
                     IIILVLQRFTTGFIKSIAILIGLVLGTIGAGLLGMVDINQVNHAGWLGIPVPFRFSGF
                     SFDVTSTLVFFIVAIVSLIESTGVYHALSEITGKKLERKDFRKGYTAEGLAIVLGSIF
                     NSFPYTAYSQNVGLVSLSGAKKNNVIYGMVVLLLICGCISKLGALANIIPLPVLGGAM
                     IAMFGMVMAYGVSILGHIDFKNQNNLLIIAVSVGLGTGISAVPQAFKGLGEQFAWLTQ
                     NGIVLGAISAIILNFFFNGIKYKQTEENVK"
     gene            7076..8542
                     /gene="guaB"
                     /locus_tag="O6Y56_001224"
     CDS             7076..8542
                     /gene="guaB"
                     /locus_tag="O6Y56_001224"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002955225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDB5574480.1"
                     /translation="MWESKFAKESLTFDDVLLIPAQSDILPKDVDLSVQLSDKVKLNI
                     PVISAGMDTVTESKMAIAMARQGGLGVIHKNMGVEEQADEVQKVKRSENGVISNPFFL
                     TPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRDLRFIEDFSIKIVDVMTQE
                     NLITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVIEFPNAAKDEHG
                     RLLVAAAIGISKDTDIRAQKLVEAGVDVLVIDTAHGHSKGVIDQVKHIKKTYPEITLV
                     AGNVATAEATKDLFEAGADIVKVGIGPGSICTTRVVAGVGVPQITAIYDCATEARKHG
                     KAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEIFQGRQYKVYRGMGS
                     LGAMEKGSNDRYFQEDKAPKKFVPEGIEGRTAYKGALQDTIYQLMGGVRAGMGYTGSH
                     DLRELREEAQFTRMGPAGLAESHPHNIQITKESPNYSF"
     gene            8567..10108
                     /gene="guaA"
                     /locus_tag="O6Y56_001225"
     CDS             8567..10108
                     /gene="guaA"
                     /locus_tag="O6Y56_001225"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDB5574481.1"
                     /translation="MEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIE
                     EIKKMNPKGIILSGGPNSVYEEGSFTIDPEIYNLGIPVLGICYGMQLTTKLLGGKVER
                     ANEREYGKAIINAKSDELFAGLPAEQTVWMSHSDKVIEIPEGFEVIADSPSTDYAAIE
                     DKKRRIYGVQFHPEVRHTEYGNDLLNNFVRRVCDCKGQWTMENFIEIEIEKIRQRVGD
                     RRVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDMVMEQFGEGFNMNI
                     IRVNAKDRFMNKLKGVSGPEQKRKIIGNEFVYVFDDEASKLKGVDFLAQGTLYTDVIE
                     SGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRKLGIELGIPEHLVWRQPFP
                     GPGLGIRVLGEITEDKLEIVRESDAILRQVIREEGLEREIWQYFTVLPNIQSVGVMGD
                     YRTYDHTVGIRAVTSIDGMTSDFARIDWEVLQKISSRIVNEVDHVNRVVYDITSKPPS
                     TIEWE"
     gene            10620..11726
                     /locus_tag="O6Y56_001226"
     CDS             10620..11726
                     /locus_tag="O6Y56_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000361524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDB5574482.1"
                     /translation="MDKSLEINLKELESIMYKEKVIDVKEYDNLKVTFETLNDAPKSE
                     IPTPFTIEQMLYKLETKNLYFPEIKSKEKCVELLHSVGYYNLKHFMYNEFGKDEPKNF
                     DEVYILYKFDRYLLKQLFSLVNMLETHIRNIILEVYMLEIEYNNKPSTLFYLDKDLYF
                     EKVNDEYKYSAKKLKEFNRLQNVFWRAIEKKKSNDNVKHNIKKYNIIPAWVLFQNFSF
                     GDLSTFYRTTLPTYRNKVSKRIENLIEKNTGISIKLPEKLLCAWLNSIRFLRNRIAHT
                     DIIYGINFTNTCAKHHSDEEMYVNIEKYKYQQRLVTFLLAMKKIFMSMPENNIIEWNE
                     TLTKIENKCSEHNFIKLSRLGVIENNLSYFKITK"
     gene            complement(12335..12727)
                     /locus_tag="O6Y56_001227"
     CDS             complement(12335..12727)
                     /locus_tag="O6Y56_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000888757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574483.1"
                     /translation="MLEDNGDIRLLYQSIEELASVLGQSQFETKTVSLIFVQMDLRYS
                     VFEKVQTDFMKYLAHKNSDEIKYIDLIKIIENALPENKELSINVINSIIIGFANNYYP
                     ILQSLVPEIQSSYGITINKNFNINSIDF"
     gene            complement(12749..12970)
                     /locus_tag="O6Y56_001228"
     CDS             complement(12749..12970)
                     /locus_tag="O6Y56_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000035496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574484.1"
                     /translation="MAPPVRPPPTAATIFDKGYSGIVKELKPLLKWSEVPANAVDDAV
                     KRCTINAGLSKGDAGIVSTVVKEAIAWLF"
     gene            complement(13782..14204)
                     /locus_tag="O6Y56_001229"
     CDS             complement(13782..14204)
                     /locus_tag="O6Y56_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000843947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574485.1"
                     /translation="MKSVNILLNLLPTELKNMLENKDMENILTYFMSNEISDEKLVSY
                     LSNLANQINTIEYHEMVASIYHFHFNYIDNAYDLAYYHYWQSLEISQFNNPNLLYEFL
                     EILGEPDFDMISHENIQLVANKILERDPNNKLAIKYIN"
     gene            complement(14205..14790)
                     /locus_tag="O6Y56_001230"
                     /pseudo
     CDS             complement(14205..14790)
                     /locus_tag="O6Y56_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000801062.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB-like protein"
     gene            complement(15060..15212)
                     /locus_tag="O6Y56_001231"
     CDS             complement(15060..15212)
                     /locus_tag="O6Y56_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574486.1"
                     /translation="MVPEEKGSITLSKEAAIIFATAKFKPFQNRIKNNPQKTNPFLKL
                     HENKNS"
     gene            15574..15981
                     /locus_tag="O6Y56_001232"
     CDS             15574..15981
                     /locus_tag="O6Y56_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000423525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjdF family protein"
                     /protein_id="HDB5574487.1"
                     /translation="MELSIFYNGQFFVALVEYKMENKSKFIQYTFGNEPDDIEVLDFI
                     HHQLMEMIDDVQTIVYTKNNSRKVNPKRLQRQIAKEQKKPKYSTQAQIAIKKELELKK
                     KQKRKHYKEKRDAFQKRKREIKKVKAKEKHKGH"
     gene            16028..16510
                     /locus_tag="O6Y56_001233"
     CDS             16028..16510
                     /locus_tag="O6Y56_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000600874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF523 domain-containing protein"
                     /protein_id="HDB5574488.1"
                     /translation="MILISSCLIGENVRYDGGNQLDVRLKKLIDSGKAIHACPELLGG
                     LLIPREPAEIIGGDGFDVWNNVAKVITISNKDVTDDYKHGAIVTLKILKKYPCDTVIL
                     KANSPSCGSQEIYDGNFTGNKKKGVGVATALLINEGINVYDENTFFDQNMIETIVHEK
                     "
     gene            complement(16804..18258)
                     /locus_tag="O6Y56_001234"
     CDS             complement(16804..18258)
                     /locus_tag="O6Y56_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001030866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HDB5574489.1"
                     /translation="MNKEDYLKNIVSEKISNGAEDSTTEFKVNNDDPKTIGEYISALG
                     NSATLEDKDYAYMIWGIEDESKKVVGTKFHPNNAKKGQEDLQNWLHRMIKPSIDFTFD
                     TIDYDGKNITILRIPKAIHQPISFNGEEFIRVGSYKKKLRDYPEKEKQLWKKFQELPF
                     ESLSAYLVKNYDEIFELLDYESYYKLLKQPLPIQKDLIIDHFKHEEIIKENEGNVYIT
                     NLGAILLAKNLDNFKPLKRKAPRVIKYKGNNKIETISEQVGIKGYACGFEGLIKYINN
                     LLPSNEVIGEVFRETVQMYPELAIRELVANSLIHQDLLISGAGPVIEIFDNRIEIVNP
                     GTPLIKVERFLDSPPKSRNESLASLLRRMGICEERGTGIDKVISETEKYQLPAPLITL
                     YDEFIKVTLHAYKDINDMTREEKIRATYMHACLKYVESESITNQSLRKRFGLEDKKIS
                     VISRIIKDTVAEEYIKPVDPETSPRHMRYIPYWA"
     gene            complement(18760..19119)
                     /locus_tag="O6Y56_001235"
     CDS             complement(18760..19119)
                     /locus_tag="O6Y56_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HDB5574490.1"
                     /translation="MNIISTILIIFVALEFFYIMYLETIATTSKKTSETFNISVDKLK
                     DKNINVLLKNQGVYNGLIGVLLIYGLFFSSNPKEICAAILVYIIGVAIYGGLSSNISI
                     FFKQGTLPVLALISTLW"
     gene            complement(19138..19983)
                     /locus_tag="O6Y56_001236"
     CDS             complement(19138..19983)
                     /locus_tag="O6Y56_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDB5574491.1"
                     /translation="MNIILTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPEDWRG
                     KVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHII
                     FIGYYADQHNNPFHMSPYFGYASRLLATSGIDYTYVRMAMYMDPLKPYLPELMKMHKL
                     IYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSYDMKELAAILSEASGTE
                     IKYEPVSLETFAKMYDEPKGFGALLASMYDAGARGLLDQESNDFQQLVNDQPQTLQSF
                     LQENI"
     gene            20456..21136
                     /locus_tag="O6Y56_001237"
     CDS             20456..21136
                     /locus_tag="O6Y56_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL1"
                     /protein_id="HDB5574492.1"
                     /translation="MKFKAIAKASLALGMLATGVITSNTQSVQAKTEVKQQSESELKH
                     YYNKPILERKNVTGYKYTEHGKDYIDVIVDNQYSQIALLGSDKDKFKDGENSNIDVFI
                     LREGDSRQATNYSIGGVTKSNSVQYIDYINTPILEIKKGNEDVLKDFYYISKEDISLK
                     ELDYRLRERAIKQHGLYSNGLKQGQITITMNDGTTHTIDLSQKLEKERMGESIDGTKI
                     NKILVEIK"
BASE COUNT         7122 a         3147 c         3750 g         7240 t
ORIGIN      
        1 agagggggcg ggtatttctt gcaatgaatt agtgtgaagt taatgcagca ttatcatttg
       61 attcgaaagt atctttgtcc caatgtttag ttaacttggc ggtacctgta ccagctagca
      121 ttgaatcgtt cacgtttaat gctgttctcc ccatgtcaat caatggttca acggagatga
      181 gcacaccggc taaagcgact ggcaagttta acgttgacaa caccaatatg gatgcaaatg
      241 tagccccgcc accgacgcca gcaacgccga atgaactaat aatcacgaca gcgattaacg
      301 ttacaataaa ttgtaaatca atttctacat tagcgacggg tgcgaccata attgcaagca
      361 tggcaggata aatgcctgca caaccatttt gtccaatcga caatccaaat gtcgcagcga
      421 aattggcaat accctccggc acgcctagac gtcttgtttg tgtttgtata ttcagtggta
      481 aggcgcccgc gcttgagcgt gatgtgaatg caaagattaa tacttccaaa gtctttttaa
      541 catagcgaat tgggctaatg cctaacagac ttaaaataac taagtgaatg atatacatcg
      601 taattaatgc agcgtacgat gcgattaaga attttcctaa agtccaaatg gcaccaaagt
      661 cacttgtcga taacgtgttg gccataattg ctaatacacc gtatggcgtt aaacgtaaga
      721 cgaacgtcac aatcgccatt actagtgaat agatagcgtc aatcgcacgc ttaagcaatt
      781 caccatgatc agattgtttg cgtgctacgc gtaaataagc aaatcctata aacgaagcaa
      841 atatcacgac agcaatcgtg gaagttgcac gttgtccagt gaaatctaag aatggatttt
      901 taggcaataa ttccaaaatt tgttgtggta acgtatgtgc tgttaaatcc tttgcttgtt
      961 tagcaatttc gcttccacgt gcttgttcag cgttgccaag attaattgtt gatgcgtcta
     1021 aaccaaacac caaggcatac acaactccta caatcgcagc aatcgtgaca gtgccgatta
     1081 aaaagataca aatgagacta ccaattttag caaacttttc tccgatttga attttagtga
     1141 atgcagcgac aatagaaatg aaaattaaag gcataacaat catttgcaac aatgcaacgt
     1201 aaccttgtcc gacaatgttg aaccagtcac ttgttgatgt aatgacatta gaatgtgtgc
     1261 cataggcaag atgtagtaac acgccaaata caatgccgat acctaaagct gtaaacacac
     1321 gtttcgcaaa agatatatgt ttacgagcca tcatgtgcaa tattacgatg aaaatcacca
     1381 atacaataat attgatcagt gtaagaaaag cattcatgaa cgtcactcct caaatttttg
     1441 aatataattc cgactagtat gctgagaata atattaattt taaaatattt caagagggca
     1501 tttgcaatta aatgtaaaca tgatgaaatt cgaccgttgg cataagggaa tttgtaaaca
     1561 aatcgttttg aattcagtag tgataggtgg aaagggtaaa tagtgttgtg agctagtcga
     1621 ttaaagttaa tatttgaaaa tgaagcaagg tattaaatgc aataaattaa ataagttgtc
     1681 attaaagcgt taatactaga aatgatttta acgggaaaaa agtgatgaat atttggaaaa
     1741 gatatatatc gtgcactgtc atgagagata agatatgaga aaacaaatgt atccttgaat
     1801 cgagatgtgg ctatggcggt ttgataaaaa ttgctaacct catatttatt gaataaaaag
     1861 ataataaatg atcaaccttg aaaagacgct tcgaacaaac acgttgtaaa aaattctgtt
     1921 gaatcaaaat tagcatcttg tgagggttcg tgtgtgcagg tggtagttca aaagctaccg
     1981 taaacaaata tttttgtttg agcaaaaaga cgtttgtagt aaatgtgaat atgagtgtgc
     2041 ccttgtgcga ttcgtaagtt actaacacaa ccaaacattt aaattgaata ggcttataag
     2101 atgaatctat ttaggaatac acagaagcca tcccatttaa aagtaacata ctacaaaaat
     2161 ttattcaaaa ttcaatatta atcataatga ataattaaaa aacctgaaac aaattagttt
     2221 gatatgctct cttaaaagta gatattgaaa ggagtatatc agcttgtttc aggttttatg
     2281 aattgagtat taaatttgaa aataaattac agttctatag gtttataaaa gatcagtttt
     2341 taaatcatag ctatatataa ctgagtatta aatttgtgtt caaatcacaa gtttacaagt
     2401 tgaataaacg tgcgaagaaa ccttttttct cttcttgagg tttaggttct gccatttcag
     2461 actgtgaagc tgtgctgtca ttttctgctt tcgcttccga tgaatcgttc gaagtagctt
     2521 gtttagaagc ttctacatgg gcttctgcta cttgttgttc agcatcatgt tgcgcttctg
     2581 catctactgt agcttcttta tttgaagtct cagctgcttt gtcattttta gactgctcaa
     2641 cgctggcttt ttcaattgct tcagttgcag aaatttgatc ctctttatct actttagtag
     2701 cagtgccatc gcctgcattt tctgctttag tatccgtctt ggcgtctgtt gatgtattca
     2761 ctccagcaac ctttgaatct ttgctgtcag ctttatcttc agtaacagca ttactttcaa
     2821 ctttatttgt tgattcagcc aatactttag cttgagatgc ttgtgcttct tggatagcct
     2881 cttgtgatgt ttggatggct tttaaggatt cactatttga atcgatttta gttgtaagtt
     2941 gattttgaag ttcttttaat tcttgttgtt gctgatgtac ttgattcatc atttgaccaa
     3001 gtaggtgacg ttcttggcgc attttctgga tttctagacg taaatcttct actagttgag
     3061 cgacattttg attagtaggt aagtttttgt catcgttttt gacaatgact tgcaggaagt
     3121 ctttttcttt ttctaattca tcaaacgcta gatcataact atttgtttgt tttactttgt
     3181 cggcaatgtc tttgaaaagc tcgatatctt cttctttgaa atcagttgct tcacgaccac
     3241 gatattcagt cttgcttagt tggtaaccac gttcttctaa atgttgaaca attttacgga
     3301 cttgcttctc acttagttct acgcgttgtg caaattcttt agttaacata ctttaaagtc
     3361 ctttctgcat atactttatg tatactgacg tttgtctacg ggcagtgaaa cgtcagtctt
     3421 gcttcataca tagtttaaac gttattgtta gtgatttcaa gtttgtttaa aatggtttac
     3481 gtaaatccat ttcttctaat aaagcataaa tgatttcacg tgcgatacca tttgcaaata
     3541 catacttcaa aatataattt gatttaacac ttgtaccgta gatatccttt gtcagtttaa
     3601 tatttttctt taaaaatagg tcgacttttt tagtgtgacc atcattagtt ggatgaatgt
     3661 aatcaatttc agtttgtctt tcaaattgat gttcgtataa aaaatgtcta cggtgttcaa
     3721 taatgagccc attattttgt gttaaatctg caggttcttt agggacttcc atcattaaaa
     3781 agttaatact tctagaatga acaaggtttg ataataagtt tagttcatgt tcaatttgat
     3841 gtaatgtttg tgtcattaac tcatcatggt tgggtaggtc ttttgcgaat aaataaatta
     3901 aaaatgctga attggttgtg gcttcataat gtgcagttgc tagactgaca acaacatcgt
     3961 tttctaagcc tacgataaag acataatcgt tttcagtttt gttgttttct aatgagcgtt
     4021 tgatgatacg tttatcttca gttaaagata aatttaactt agtatcgtaa agtttaagtg
     4081 cttcgttgta atgtggatct ttgacagatt gaatggtttt aaattccata agaacacctc
     4141 cccaatttaa ataatattat agcataatcg actgctgtaa aagactgttc ataaactttt
     4201 aaatggtata aaaaactgta ctatcttaaa ttagacagta cagtaatctc attttgaatt
     4261 cagtgtgata actaagcttt gggaccttta gatgcttcag caaaatgtgt aatatcaatc
     4321 tcttcataag ctgaattatt ttcttgcact tcttgatgtg atgatttgtc acgaaccgct
     4381 acaactaaca ttttatcgtc taaaataagt tgtttatatt tttctaattc atcaggcgct
     4441 aagttgtagc gtgataaaac tgcatgttca ccatcttctc ctgttaacag tttagtcatt
     4501 ctatcactaa atgttccact tgttgagata agggagattt cagagtcgtg taagtcattt
     4561 aggtgtaatt tacttttact aataattgtt agctctgatt ctaaataacc ttcagatttc
     4621 ttttgattga ttacgttgta taattcgcca gtgtcattta ctacagtaat atctgccata
     4681 gttgtcgccc ctttaaaaat ttgtttattt aatcttttac ccttcttatt ataaagtaaa
     4741 acccttacat tattaagtta taagtcttca ttcgcattaa acgtctctgt acatttataa
     4801 aactattaaa agattaccta agcagttatt gaaaaaatgc cgaaaatttg ctattatcgt
     4861 taaataattt acataaactc atataatcta aagaatatgg ctttagaagt ttctaccatg
     4921 ttgccttgaa cgacatgact atgagtaaca acacaatact aggagtagct tcagccatta
     4981 aattgtagcc atgatgggtg atttatatca ttttacatga tggtcacagt ttatttgatg
     5041 aaacttcttt tacattgatt gcatgaccaa tacgtgatgc atgttcgttc actcataaac
     5101 cctgaaacta ttatttagtt tggggatttt tttgtatcta gcaccaattt aagagcaaaa
     5161 tgtttcacac aaatctgagg aggttttaag agtggagtta ctaggacaaa aagtaaagga
     5221 agacggcgtt gtcattgatg agaagatttt aaaagtcgat ggatttttaa atcatcaaat
     5281 tgatgcaaag ttaatgaatg aagttggtcg cactttttac gagcaattta aagataaagg
     5341 gattactaaa atcttaacca ttgaagcttc cggtatcgca ccagcaatca tggctgcact
     5401 gcattttgat gtgccatgtt tatttgcgaa aaaagcaaaa cctagcactt tgacggatgg
     5461 ttattatgaa acatctattc attcatttac taaaaataaa acaagtacga tcattgtttc
     5521 aaaagaattt ttatcagaag aagatactgt actcatcatc gatgactttt tagcaaatgg
     5581 tgatgcgtca ttagggttat acgatatcgc acagcaagca aatgctaaga cagctggtat
     5641 tggtattgtt gttgaaaaga gtttccaaaa tgggcatcaa cgtttagaag aagcaggttt
     5701 aacagtttct tctctctgca aggttgcttc actagaagga aataaagtga cattggtggg
     5761 agaagaataa tgaaaaattt aatcctaagt gttcaacatc ttttagctat gtacgcaggt
     5821 gccatcttag ttccaatcat tgttggtaca agtttgaagt ttacacctga acaaatcgct
     5881 tacttagtta cagtagatat atttatgtgt ggagttgcca catttttaca agccaataaa
     5941 gtaacaggaa caggattacc gatcgttctt ggatgtacat tcacggctgt tgcgcccatg
     6001 attttaattg gtcaaacgaa aggaatagat gtactttacg gttcgctatt tttatcaggg
     6061 atattagtta ttatcatcgc gcctttcttt tcacatcttg taaaattctt cccaccagta
     6121 gtaacgggta gtgttgttac tatcattggt atcaatttaa tgccagtagc aatgaattac
     6181 ttagctggag gtcaaggtgc aaaggactat ggagatgtta agaacatttt gttaggttta
     6241 atgacattaa tcattattct tgttttacaa agattcacaa ctggatttat taagagtatt
     6301 gccatattaa ttggactcgt tttaggaacg ataggtgctg gcttacttgg gatggtcgat
     6361 attaatcaag tcaatcatgc cggttggtta ggcatcccag tgccgtttag attctcagga
     6421 tttagctttg atgtgacatc gactttagtg ttctttattg tagctatcgt tagtttaatt
     6481 gagtcgacag gtgtctatca tgcgttaagt gaaattaccg gtaagaagtt agaaagaaaa
     6541 gattttcgta aaggttatac tgcggaaggt ctagcgatag tgttaggttc tatattcaat
     6601 tcatttccgt atacagccta ttcgcaaaat gtaggacttg tttctttatc cggcgctaag
     6661 aaaaacaatg ttatatacgg catggtcgtg ttattactta tatgtggttg tatatctaag
     6721 cttggcgcat tagcaaatat cataccgcta cctgtgttag gcggtgcgat gatagctatg
     6781 tttggcatgg taatggcata tggtgttagt atattaggac atatcgattt taaaaatcaa
     6841 aacaatttat taattatcgc tgtgtcagta ggattaggta ctggtataag cgctgtacca
     6901 caagcattta aaggtttagg tgaacaattt gcatggttga ctcaaaacgg aattgtttta
     6961 ggtgcaatct ctgcaattat tcttaatttc ttttttaatg gaataaagta taaacaaacg
     7021 gaagaaaatg tgaaataata taactaatta atttgaaaaa tggaggctgt ttttaatgtg
     7081 ggaaagtaaa tttgcaaaag aatcattaac gtttgatgat gtgttattaa ttccagcaca
     7141 atctgatatt ttaccgaaag acgttgattt aagcgtacaa ttatcagaca aagttaaatt
     7201 aaatattcca gttatttctg ctggtatgga tactgtaact gaatctaaaa tggcgattgc
     7261 tatggctcgt caaggtggtt taggtgttat tcataaaaat atgggcgttg aagaacaagc
     7321 ggacgaagtt caaaaagtaa aacgctcaga aaatggtgtc atttcaaacc catttttctt
     7381 aacaccagaa gaaagtgttt atgaagcgga agcattaatg ggtaaatacc gtatttcagg
     7441 tgtaccaatt gttgataata aagaagatcg caacttagta ggtattttaa caaaccgcga
     7501 cttacgtttt attgaagact tctcaattaa aattgtagat gtaatgacgc aagaaaattt
     7561 aattacagct ccagtgaata caacacttga agaagcagaa aaaattctcc aaaaacataa
     7621 gattgaaaag ttaccattag ttaaagatgg acgtctagaa ggtcttatta ctattaaaga
     7681 tattgaaaaa gttatcgaat tccctaatgc agcaaaagat gaacatggtc gtctacttgt
     7741 agccgcagca atcggtattt caaaagacac tgatattcgt gctcaaaaat tagtcgaagc
     7801 aggtgtggat gtcttagtta tcgatacagc acatggtcac tctaaaggcg ttatcgatca
     7861 agtgaaacat attaagaaga cttacccaga aatcacatta gtagctggta acgtagcaac
     7921 tgcagaagca acaaaagatt tatttgaagc gggtgcagat attgttaaag ttggtattgg
     7981 cccaggttca atttgtacga cacgtgttgt agcaggtgtt ggtgtaccac aaattacagc
     8041 aatttatgat tgtgcaactg aagcacgcaa acatggtaaa gctatcattg ctgatggcgg
     8101 tattaaattc tcaggagata tcattaaagc attagctgct ggtggacatg cggttatgtt
     8161 aggtagctta ttagcaggta ctgaagaaag tccaggcgca acagaaattt tccaaggtag
     8221 acaatataaa gtataccgtg gtatgggctc tttaggtgcg atggaaaaag gttcaaacga
     8281 ccgttacttc caagaggaca aagcgcctaa gaaatttgtt cctgaaggta tcgaaggacg
     8341 tacggcatat aaaggtgcgt tacaagatac aatttaccaa ttaatgggcg gtgtgcgtgc
     8401 tggtatgggt tatactggtt cacacgattt aagagaatta cgcgaagaag cacaatttac
     8461 acgtatgggt cctgctggtt tagcagaaag ccatccacat aatattcaaa ttacgaaaga
     8521 atcaccgaac tactcattct aattaagata aaggagaacg acaaatatgg aaatggcaaa
     8581 agaacaagag ttaatccttg tcttagactt tggtagccaa tacaaccaat taattacacg
     8641 ccgaattcgt gaaatgggcg tttatagtga attacacgat catgaaattt caattgaaga
     8701 aattaagaaa atgaatccaa aaggtatcat cttatcaggt ggtccaaatt cagtttatga
     8761 agaaggttca tttacaattg atccggaaat atataattta ggaattccag tacttggtat
     8821 ttgttacggc atgcaattaa ctactaaatt attaggtggt aaagttgaac gtgccaatga
     8881 acgtgaatac ggtaaagcaa tcattaatgc gaagtcagat gagttattcg ctggcttacc
     8941 agcagaacaa acagtttgga tgagtcattc tgataaagtc attgaaattc cagaaggctt
     9001 tgaagttatc gctgatagcc caagcacaga ctatgcagca atcgaagata agaaacgtcg
     9061 catttatggt gttcaattcc atccagaagt acgtcataca gaatatggta atgatttatt
     9121 aaacaatttt gtccgtcgtg tttgtgattg taaaggtcaa tggacaatgg aaaactttat
     9181 cgaaatcgaa attgaaaaga ttcgtcaacg cgtaggagac cgtcgtgtat tatgtgcgat
     9241 gagtggcggc gtagattcat ctgttgtagc tgtgctattg cataaagcaa ttggtgatca
     9301 actaacatgt atctttgtag accatggctt acttcgtaaa ggtgaaggcg acatggttat
     9361 ggagcaattc ggtgaaggtt tcaacatgaa tattattcgt gttaatgcga aagatcgctt
     9421 tatgaataaa ttaaaaggtg tttcaggtcc tgaacaaaaa cgtaaaatca ttggtaatga
     9481 atttgtatat gtgtttgatg atgaagcatc aaaactcaaa ggtgtagact tccttgcgca
     9541 aggaacacta tatacagacg tcatcgaatc aggtactaag acagcacaaa caatcaaatc
     9601 acaccacaat gttggtggat taccagaaga catggaattc gaattaatcg aaccaatcaa
     9661 tacattgttt aaagatgaag tacgtaaatt aggtattgag ttaggtattc cagaacattt
     9721 agtgtggaga caaccattcc caggacctgg tcttggtatt cgtgtacttg gagaaattac
     9781 tgaagataaa ctagaaatcg ttagagaatc agacgcgatt ttacgccaag tgattagaga
     9841 agaaggtctt gaaagagaaa tttggcaata cttcacagtg ttaccaaaca ttcaatcagt
     9901 aggtgttatg ggagactatc gtacgtatga tcacacagta ggtatccgtg cagtaacatc
     9961 tatcgacggt atgacaagtg acttcgcacg catcgattgg gaagtcttac aaaagatttc
    10021 tagtcgtatc gtaaacgaag tagaccacgt taaccgcgta gtctatgaca ttacatcaaa
    10081 accaccaagc acaattgagt gggaataatt atatttagca aatgataggc tggagatacc
    10141 gtgattatgc ggtttccagc cttttttggt gggcttggca tgggcaacat catgtgatga
    10201 aatgatggga gttatatctt tcttatattt tgagacggag atgatgagaa gttagacaaa
    10261 aatgtagaag aagtatttaa cgccaatcct agtcatacaa tgattgtaga tgatatccgt
    10321 tagaggagtg agagcaaatt tatttgttac taagagacaa gggttttaaa taaatatctt
    10381 ttgtactaca taaaagaaag tggtcgttat catagaatat ttggcgataa ggtaaatctg
    10441 attatgttag aacctatatt tattgatgat ttagtaaggt ttgagaagac aagaatgatt
    10501 gaattacaat tgacaattga caccccttag attaatatta atttattaga agtcaactaa
    10561 cgcctcttag caatgcgaaa cacagttggc ctttttttgt aataggagaa tttatagtta
    10621 tggataaatc acttgaaatt aacttaaaag aattagaaag cataatgtat aaagaaaaag
    10681 taatcgacgt taaagagtat gataatttaa aagtaacttt tgagacacta aacgatgctc
    10741 ctaaaagtga aatacccact ccctttacaa tagaacaaat gttatataaa ttagaaacta
    10801 aaaatttata ttttcctgaa attaagtcaa aagaaaaatg tgtggagctt ttacatagtg
    10861 ttggctatta taatttgaag cattttatgt ataatgaatt tggtaaagat gagccgaaaa
    10921 attttgatga agtatatata ctttataaat ttgataggta tttattgaaa caattattta
    10981 gtttagtaaa tatgttggaa actcatataa gaaatattat tttagaagta tatatgttag
    11041 aaattgagta taataacaag ccttcgacac tgttctattt agataaagat ttatattttg
    11101 agaaagttaa tgatgagtat aaatattctg ccaaaaagct aaaagagttc aataggttac
    11161 aaaatgtttt ttggagagct atagaaaaaa agaaaagtaa cgataacgtt aaacataata
    11221 ttaaaaaata caatattata ccagcttggg ttttattcca aaattttagt tttggagatt
    11281 tgtctacttt ttatagaact acattaccaa cttatagaaa taaagtaagt aagcgaattg
    11341 aaaatttaat agaaaaaaat actggtataa gcataaaact tccagaaaag ttattgtgtg
    11401 catggttgaa tagtatcagg tttttgagaa atagaatagc tcacacagat ataatttatg
    11461 gaattaattt tacaaacacc tgtgcaaaac atcatagtga tgaggaaatg tatgtaaata
    11521 tagaaaagta taaatatcag caaaggttag ttacgttttt attagctatg aagaaaatat
    11581 ttatgagtat gccagaaaat aatatcattg aatggaatga gactctaact aaaatagaga
    11641 ataaatgctc agaacataac tttattaaac tttctaggtt aggagttatt gaaaataacc
    11701 tttcttactt taaaataact aaataaaaaa tagcgcacac taataactaa gtgattgtgt
    11761 ttttacgctg aataatgccc tgtgttgtag ttagaaagat tttcaaataa cagtatattt
    11821 ataaaatgtt gaattataat atggtcggtt tattttatag gagtaataaa aagcatttat
    11881 cttttatccg ccacaaataa tgagtgaatg taccttgctt tcaatgttga tattttacaa
    11941 ccttgtagag ttgatttgat atatcatctc acacgttgta ggcaatgaat acgtaaatta
    12001 tgcagtgaca tgaactgttg agaagtatag agcattaaaa atcttgatat atcaatagat
    12061 ataaactggt acaaattaac gaaaagcact cttgtcattg agtgggaata actatatata
    12121 gcaaatgata ggctggagtt accgatatta cgcggtttcc agcctttttt ggtgttctta
    12181 atatgggcaa catcatgtta tgaaatgatg ggagtcatat ctgtagaaat tggcgtacca
    12241 atttctttat gttggggccc cgcagtcaac tactagagcc tacgattttg attttatgtc
    12301 ctgggatcgg tttcctattc ttattaaata gtatttaaaa atctatacta tttatattga
    12361 aatttttatt tatggttatg ccataactac tttgtatttc cggaactaaa ctttgcaata
    12421 ttgggtaata gttattagcg aaaccaataa taatggaatt aatcacattg atactaagtt
    12481 ctttattttc aggtaatgca ttttctatta ttttgattaa gtctatatat tttatttcat
    12541 cagaattttt atgtgctaaa tacttcataa aatcagtttg cactttttcg aaaacgctat
    12601 atcttaagtc catttgtaca aatattaagc tgacagtttt agtttcgaat tgactttgac
    12661 ccaaaactga agcaagttct tctattgatt gatatagcaa tctgatatcg ccgttatctt
    12721 caagcatatg aaacactcct ttatcatttt agaataacca tgcaatggct tctttgacta
    12781 cagttgagac tattccagca tcacctttac ttagaccggc atttattgtg catcgtttaa
    12841 ccgcatcatc gacagcgtta gctggtactt ctgaccattt tagcaatggt ttcaattctt
    12901 ttacaatacc tgaataccct ttatcaaaaa tagttgcagc tgtcggtgga ggtctaaccg
    12961 gtggagccac attctgctaa tattgtagga gtgataccat gaaaaatttt tttaatatat
    13021 gggtatgttc gttcttattt ttagtaataa tatcatgggt gataattagt ataaaatttg
    13081 gtaatatcag cacgacgcaa atatttattt ctaatctggt tatatttatt gcttatatac
    13141 tatatttagt taagtttatt cgtttcaaaa aaaagagtgg cgatcagtaa acaggtataa
    13201 agaaagtcga ttttgtcttt ctttcgaaca tatataagtt tatatagatg tagaactaat
    13261 ttttatttgt aaattatttt gtaattgaaa atgagtacga acatgttctc caataaacag
    13321 agtatgtctt ggaagaaatc tattatactt atgtgaataa gtcataatgt cagacataca
    13381 taataagacg aataggttgt aaatagcttt ttacttctaa ttgtttagac ggcatttgtt
    13441 ggtcgccatt tttataaaat aatataaatg accaaaccac agcacctatt aatttaagag
    13501 tgaggtcatt tttaaaggta aaaaagcagt aattttatat attaaaatga tatataaaac
    13561 aagtagtatt agtatgttgt gaattgttat agaatttgac ttgttagcaa tttcgtagct
    13621 aatgtaatag caagtactgt agggttgtat tttttaaagg tagtgaaatg atattggatt
    13681 tttgaagtgg aatatttgta gatggttaca acgaagcata ttagaactac aaaaggaacg
    13741 atgaaattaa atgtccatca ttccttttgc ctagtcgttt tttagttaat atatttaatt
    13801 gctaacttat tattagggtc tctttcaaga attttatttg cgaccaattg aatattctca
    13861 tgtgaaatca tatcaaagtc tggttctcca aggatttcta aaaattcgta taataaatta
    13921 ggattattaa attgcgaaat ctctaacgat tgccaataat gatagtatgc taaatcatag
    13981 gcattatcta tgtaattgaa atgaaagtga tagatgcttg cgaccatttc atgatattca
    14041 attgtattta tttgattcgc aagatttgat aaatatgata ctaatttttc atcagaaatt
    14101 tcgttcgaca taaagtatgt tagaatattc tccatatctt tattctctaa catatttttt
    14161 aattcagttg gtaataaatt taatagaatg ttaacgcttt tcatttattt aacccatcca
    14221 ttcgatatat atatattgcc attttttcgt gtataagtta tgactacagt tctaccactc
    14281 atgacaagtg ttttttggta tgcggacttt ttgtatcggc tttgctttcc atacctcata
    14341 acatgcgaca ttactttaga aacatctttc caattgtttt tagtaacttt attccaatta
    14401 tgtttactag caagaatatg ttttctttta ttaactccta gattggctac agaaggtaaa
    14461 actttaccaa aactctttgt tttgatagcg gtttgagttg cttttttcat atgttttaat
    14521 tgcatagttt attccgtatc tagctacagc agctaatatt actaatggca atgcagaaga
    14581 tttagcttca attgagttga attttattat tacgccagtt tctttgtcga taaatgtagc
    14641 ttcatattct gcattttcaa attgttctac gaaaacgtca taattcttat ttattagttt
    14701 tccattttca tcgacgtatc tgcccttaac atccatggag ttagtattta aatcatattg
    14761 aatattttta tctaaatcaa tatcttcttt tcgtttttcc actaacgtct ttttcaagtt
    14821 ttatatttac attttttaag cagaagtatc ccattatttc aacgtctgat ttatctataa
    14881 ttaaatacgc acgtaaggaa ttttgatcgt tcattgttat tgttttatgt tttaggaaat
    14941 gtgctattga agggtttaaa gatgtttggg atttcttggt ttcttgactt atatagttat
    15001 gaaagagggc gttgtccttt attaaatttc tgagatcaga aatgctataa ataaaatgat
    15061 taagaatttt tgttttcatg taatttaaga aatggatttg ttttttgtgg gttattttta
    15121 attctgttct gaaatggttt gaattttgca gttgcaaaaa tgatagctgc ttcttttgac
    15181 aaagtaatag aacctttttc ttctggtacc atgacaatca ctccttatgc attttgtttt
    15241 taatattata aaataatttt actatacaaa ataggttgtg taaatagttt cttattgtta
    15301 ccaaatggtt tgtttgaaag cattatgcaa tgctaataaa cactaatatc ttgtacttat
    15361 ttccatttga ataaattgtt agcattatta tcatttaagt tctgtaatgt aatttttaaa
    15421 aatacagttt acatggaacg ttgtggcata tattctgtat atagaagtgt aaaaacacaa
    15481 ttgggttggt agtcccaatg cagttttaaa actgtcagta accttcctcc tcgggtcgtc
    15541 cgtcatttct aataaaacta gaggagggat agcatggagc tatctatttt ttacaatggg
    15601 caattttttg tagcattagt agaatataaa atggaaaata aatctaaatt tatccaatac
    15661 acatttggga atgaacctga tgatatagag gtattggatt ttattcatca tcaattaatg
    15721 gaaatgattg atgatgtgca aactattgtt tatacaaaaa ataattctag aaaagtaaat
    15781 ccgaaaaggc tacaaagaca aattgctaag gagcaaaaga aacctaaata ctctacccaa
    15841 gcacaaatag ctattaagaa agaattagaa ttaaagaaaa agcaaaagcg gaagcactat
    15901 aaagaaaaac gtgatgcatt tcaaaaaaga aaaagagaaa ttaaaaaggt taaagcaaaa
    15961 gagaagcata aggggcatta gcaatacgac aaataaatta aagcaaaatg atttataggt
    16021 ggttgggatg attttaatta gttcgtgttt gataggcgaa aatgtaagat acgatggtgg
    16081 caatcaattg gatgttagat tgaaaaaatt aatagacagc ggaaaagcta ttcacgcatg
    16141 tccagaatta cttggtggat tactaattcc tagagaacct gcagaaatta ttggtggaga
    16201 tggttttgat gtgtggaata acgttgcaaa ggttattact atttcgaaca aagacgtaac
    16261 tgacgattat aaacatggag cgatagttac gctaaaaatt ttgaaaaaat atccatgtga
    16321 tacagttatt ttaaaagcaa atagtccatc ttgtggatct caagaaatat atgatgggaa
    16381 ttttacagga aataagaaaa agggtgtagg tgtggcaact gctttactca ttaatgaagg
    16441 tataaacgta tatgatgaaa atacgttttt tgaccaaaac atgattgaaa cgatagtaca
    16501 tgaaaagtaa gtattgaatc attttttaat ctaaaatact acaaaaattt tcattatgaa
    16561 gtgaaaataa cgaacaagta aagtgcaaat aaaaaagcga cccaaatccc tttaaaaaca
    16621 agggttagat tgtatttaat tgataatgaa gttgtttaat gaaaataacg tgcaagtaaa
    16681 gtgcaagtag aatgcaaata aaaaagcgac ctaaatccct ttaaaaagaa ggattaggtc
    16741 gtatttaatt ggtaatgaag ttgtttaacg aaaataacgt gcaagtaaag cgcaaataaa
    16801 aaatcatgcc cagtatggta tatatctcat gtgtctgggt gaagtctccg gatctacagg
    16861 tttgatatat tcttcagcaa ctgtgtcttt tataattctt gaaataactg agattttttt
    16921 atcttccaat ccaaatcttt ttcgcagtga ttgatttgta atactttcac tctcaacata
    16981 tttcaagcaa gcatgcatat atgttgcacg aattttttcc tctctagtca tgtcattaat
    17041 atctttgtag gcgtgtagag taactttaat aaattcgtca tataaagtta ttaatggagc
    17101 ggggagctga tatttttcag tttctgaaat tactttgtca attcctgttc cgcgttcttc
    17161 acaaatgccc attcttctta ataaggaagc tagactttca tttctagatt ttggtggcga
    17221 atctaaaaat ctttcaactt taattaatgg agtgcctgga ttaactattt caattctatt
    17281 atcaaatatt tctatcacag gtccagcgcc actaataagt aaatcttgat gtataagaga
    17341 attagctact aattctctta tggctaattc tggatacatt tgaactgttt ctctaaaaac
    17401 ttcaccaata acttcattgc ttggtaataa gttattaata tacttaataa gtccttcaaa
    17461 tccacaagca tatcctttaa taccgacttg ttcactaata gtttcgattt tgttattacc
    17521 tttatattta ataacgcgag gagcttttct tttaagtggt ttaaaattat ctaaattttt
    17581 agccaataaa atcgctccta aatttgtaat ataaacatta ccttcatttt cttttatgat
    17641 ttcctcatgt ttgaaatgat caataattaa atctttttga attggaagag gttgttttaa
    17701 tagtttgtaa tacgattcgt agtctagtaa ttcaaaaatt tcatcatagt tttttactaa
    17761 atatgcagaa agtgattcaa aaggtaactc ttggaatttc ttccatagtt gtttttcttt
    17821 ttcaggataa tccctcagct ttttcttata ggatcctact cttataaatt cttcaccgtt
    17881 aaatgaaatt ggttggtgaa tggctttagg aattctcaat attgttatat tttttccatc
    17941 ataatctata gtatcaaaag taaaatctat ggaaggttta atcatcctat gaagccaatt
    18001 ttgtaagtct tcttgtcctt ttttagcatt attaggatgg aatttggtac cgaccacctt
    18061 ttttgattca tcctcaattc cccatatcat ataagcatag tctttgtctt ctaaagttgc
    18121 tgaatttcct agagctgaga tatattctcc aattgtttta gggtcatcgt tatttacttt
    18181 aaattcagta gttgaatctt cagcgccgtt acttattttt tcggaaacaa tattttttaa
    18241 ataatcttct ttattcataa tattaactcc taaacctata ttactatttt taattattca
    18301 tcattttctt gctattttat ctataacatg ggtatatatg ttgagatgtt tttaattatt
    18361 aagaatgcaa gtcaatatat cactatcatt tgctttttaa aatagaataa gttttttaat
    18421 aatgataact tctacattga atacatatag tgtactataa ttataataat ttttgagtaa
    18481 taatgaaata caaaattccc cttaggtatt gacttaaggg gaattaatgc cttatgaaag
    18541 ttgtgtttat taggtataat ttccaaaata catataagaa aaatgcagta agttccaatg
    18601 cgagtagtta taataatatt gcgtttaatt gttaattagt aatcatacta atcattaatt
    18661 tggaagtttt ggtcatttat tcgtgagtct aaagtccaca cccaaatcgc tcaaaccctc
    18721 aaccccagac tacatctcca aatccccaaa caccaatact taccaaagcg ttgatatgag
    18781 tgccaatact ggcaatgtac cttgtttgaa aaagatacta atattgcttg aaaggccacc
    18841 ataaatagca acgccaatga tatacactaa aatagctgcg catatttctt ttgggttact
    18901 actgaaaaac aaaccgtata ttagcaaaac tccgattaaa ccgttatata cgccttgatt
    18961 cttcaaaagt acgttaatat ttttgtcttt caatttatcg acgcttatat taaatgtttc
    19021 gctagtcttt ttggaagttg tagcaatcgt ttcaaggtac ataatataga aaaactctaa
    19081 ggctacaaat atgattaaaa ttgtcgagat gatattcact gtaacgctcc tttagtatta
    19141 aatattttct tgtaaaaatg attgcagtgt ctgtggttga tcattgacta attgttggaa
    19201 atcattggat tcttggtcta atagtcctct tgctcctgcg tcgtacattg atgccaataa
    19261 tgcaccaaag cctttaggtt catcgtacat ttttgcaaat gtctctaatg aaacgggttc
    19321 atatttaatt tctgtgcctg atgcctcaga taaaatagca gcaagttcct tcatatcata
    19381 actgtagcct gataataaat agcgtttgcc ccaagtatct ggatttttaa taatagcaat
    19441 gacgcctcta gcaatatcat ttctagtaat ataattaata cgaccatcac cagctggata
    19501 aatcagtttg tgcatcttca tcaattctgg taaatatggt ttaagtggat ccatgtacat
    19561 tgccattctt acatacgtat agtcaatgcc acttgttgcc aataaacgtg atgcataacc
    19621 aaaataagga ctcatatgga atggattatt atgctgatct gcgtaataac ctatgaaaat
    19681 gatatgagca acgccacttt gctttgccgc atatactaaa ttttccactt caggaatacg
    19741 tttgaatgat ggatggataa tacttggaat aaacacaacg gtatccattc ctttaaatgc
    19801 ttctaccatg ctttcttgat taaaataatc taattgtcgc acagaaactt ttccacgcca
    19861 atcttctgga actttctcaa catttctaac accaatgtga aaatgatcta tgtgatttgc
    19921 aatggcttga tttgtaatat gtgtgcctaa atgacctgta gcacctgtta atataatatt
    19981 cattcacttc atctcctaat ctttatatac ataacataat acttattcga tgattttcaa
    20041 aatatttgat tttataaaaa aattgcaatc tgtatttatt gtcgccgtgt atagtaaata
    20101 cacatatgct attaatgtta aaaataccgt aatgacgcgt tttagttgat gcgtgtcacc
    20161 atgatctttg aaaattttga catggtactg cgacgatatg gtgtcatttt tgtgtctgaa
    20221 agttttacag tttttaaaat taaaatggta taaagtgtga attgtataaa aaagagtctc
    20281 gacggataag aattgattaa taacagttag tattttatta attaccttaa caatgattca
    20341 attttagtta aatgaggttt aatttgaaag ggaatagcgc ctcaatataa tgtaggtaga
    20401 ttgttcatat tacgtaattg aaaaatcaaa tttaaataga ttggggctaa aaattatgaa
    20461 atttaaagcg atagcaaaag caagtttagc attgggaatg ttagcaacag gtgtaattac
    20521 gtcgaataca caatcagtac aagcgaaaac agaagtaaaa caacaaagtg aatcagagtt
    20581 gaaacactat tataataaac caattttaga gcgtaaaaat gtgactggat ataaatatac
    20641 tgaacatggt aaagattata tagacgttat agtagacaat caatattctc aaattgcttt
    20701 acttggatct gataaagata aatttaaaga cggagaaaac tcaaatatag atgtgtttat
    20761 ccttagagaa ggcgacagta gacaagcaac gaattattca attggtggcg ttacaaaatc
    20821 aaatagtgtg cagtatattg attatatcaa tacgccaatt ttagaaatca agaaaggtaa
    20881 tgaagatgta cttaaagatt tttactacat ttcaaaagaa gacatctcat taaaagaact
    20941 tgattataga ttacgagaac gtgcaatcaa acaacacggc ttgtattcaa atggtcttaa
    21001 acaaggtcaa attacaatta caatgaatga tggcacaaca catacaatcg atttaagtca
    21061 aaaacttgaa aaagaacgta tgggtgagtc aatcgacggc actaagatta ataaaattct
    21121 agtagaaatt aaataataca ttctaatagc aaagcgctat gttgaatagt gctttttatg
    21181 gaaactatgg aagttaagcg acgcactgtt gcttagcttc tttttttatg aaaagaaaac
    21241 catacgctat gcgtatggt
//
LOCUS       DALMNS010000038        21238 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.038, whole genome shotgun sequence.
ACCESSION   DALMNS010000038 DALMNS010000000
VERSION     DALMNS010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 21238)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21238)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21238
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.038"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(168..281)
                     /locus_tag="O6Y56_001238"
     CDS             complement(168..281)
                     /locus_tag="O6Y56_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574493.1"
                     /translation="MKRIVILGNVIVDGSIWLNHVDYLVKSVLLKSIKLRF"
     gene            complement(410..913)
                     /locus_tag="O6Y56_001239"
     CDS             complement(410..913)
                     /locus_tag="O6Y56_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDB5574494.1"
                     /translation="MSKWIIVSDNHTESGVLYQIYEMHPDADVYLHLGDSEFAYDDTE
                     LSLFNRVKGNCDFYPEFENEAVAKCNGVKAFYTHGHLYQVNRTRDLLAKKGLELGCLF
                     AFYGHTHVAKYEYINGVHVINPGSISQSRSSMEETYAEVIIDDQTLHGTINFKNRHHE
                     TISHTTF"
     gene            complement(906..1493)
                     /locus_tag="O6Y56_001240"
     CDS             complement(906..1493)
                     /locus_tag="O6Y56_001240"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XTP/dITP diphosphatase"
                     /protein_id="HDB5574495.1"
                     /translation="MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGST
                     FEENAILKSEAAAKALNKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLL
                     NKLGNTTDRRAQFVCVISMSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKL
                     DKTMAQLSKEQKGQISHRRNAINLLQAFLEGDKNV"
     gene            complement(1505..2305)
                     /gene="racE"
                     /locus_tag="O6Y56_001241"
     CDS             complement(1505..2305)
                     /gene="racE"
                     /locus_tag="O6Y56_001241"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDB5574496.1"
                     /translation="MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPR
                     PGEQVKQYTVEIARKLMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTA
                     IMTTRNQNVLVLGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTI
                     TSIVIHQTLKRWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSAL
                     LTFSNEHASYTEHPDHRFFATGDPIHITNIIKEWLNLSVNVERISVND"
     gene            complement(2546..3361)
                     /gene="sdhB"
                     /locus_tag="O6Y56_001242"
     CDS             complement(2546..3361)
                     /gene="sdhB"
                     /locus_tag="O6Y56_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HDB5574497.1"
                     /translation="MTEQSVKNTPQHETQSKPKQKTVKLIIKRQDTSDSKPYEETFEI
                     PYRENLNVIACLMEIRRNPVNIKGEKTTPVVWDMNCLEEVCGACSMVINGRARQSCSA
                     IVDQLEQPIRLEPMNTFPVIRDLQVDRSRMFDNLKRMKAWIPIDGTYDLGPGPRMPEK
                     KRQTAYELSKCMTCGVCLEVCPNVTENNKFVGAQAISQVRLFNLHPTGSMTKDERLNA
                     LMGTGGLQQCGNSQNCVNACPKGIPLTTSIAAMNRETTFHMFKSFFGSDHEVE"
     gene            complement(3361..5127)
                     /gene="sdhA"
                     /locus_tag="O6Y56_001243"
     CDS             complement(3361..5127)
                     /gene="sdhA"
                     /locus_tag="O6Y56_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HDB5574498.1"
                     /translation="MAEKHLIVVGGGLAGLMSTIKAAEKGAHVDLFSVVPVKRSHSVC
                     AQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLANQPPVKAMTEAAPKIIHLLDRMGVM
                     FNRTNEGLLDFRRFGGTLHHRTAYAGATTGQQLLYALDEQVRAYEVDGLVTKYEGWEF
                     LGIVKGDDDSARGIVAQNMTTAEIETFGSDAVIMATGGPGIIFGKTTNSMINTGSAAS
                     IVYQQGAIYANGEFIQIHPTAIPGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKY
                     PDYGNLVPRDIATREIFDVCINQKLGINGENMVYLDLSHKDPHELDVKLGGIIEIYEK
                     FTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGECDFSQHGGNRLGANSL
                     LSAIYGGTVAGPNAIEYISNIDRSYTDMDESIFEKRKAEEQERFDKLLAMRGTENAYK
                     LHRELGEIMTANVTVVRENEKLLETDKKIVELMKRYEDIDMEDTQTWSNQAVFFTRQL
                     WNMLVLARVITIGAYNRNESRGAHYKPEFPERNDEEWLKTTMASFQGAFEKPQFTYDD
                     VDVSLIPPRKRDYTSKSKGGKK"
     gene            complement(5179..5793)
                     /locus_tag="O6Y56_001244"
     CDS             complement(5179..5793)
                     /locus_tag="O6Y56_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b558 subunit"
                     /protein_id="HDB5574499.1"
                     /translation="MAQSKNEFYLRRIHSLLGIIPIGAFLVVHLLVNHQATQGAEAFN
                     KASNFMESLPFLIIVEFLFIYIPLLYHGLFGIHIAFTAKENVGHYSIFRNWMFFFQRV
                     SGILTFIFIGIHLWQTRLQKAFYGKEVNYDLMHETLQHPGWAIFYIICIIAVVFHFAN
                     GLWSFLVTWGGLQSPKSQRVFTWVSLIVFLVISYIGVTAIIAFM"
     gene            complement(6117..7898)
                     /gene="uvrC"
                     /locus_tag="O6Y56_001245"
     CDS             complement(6117..7898)
                     /gene="uvrC"
                     /locus_tag="O6Y56_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499646.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDB5574500.1"
                     /translation="MEDYKQRIKNKLNVVPMEPGCYLMKDRNDQVIYVGKAKKLRNRL
                     RSYFTGAHDAKTTRLVGEIRRFEFIVTSSETESLLLELNLIKQYQPRYNILLKDDKSY
                     PFIKITKEKYPRLLVTRTVKQGTGKYFGPYPNAYSAQETKKLLDRIYPYRKCDKMPDK
                     LCLYYHIGQCLGPCVYDVDLSKYAQMTKEITDFLNGEDKTILKSLEERMLTASESLDF
                     ERAKEYRDLIQHIQNLTNKQKIMSSDKTIRDVFGYSVDKGWMCIQVFFIRQGNMIKRD
                     TTMIPLQQTEEEEFYTFIGQFYSLNQHILPKEVHVPRNLDKEMIQSVVDTKIVQPARG
                     PKKDMVDLAAHNAKVSLNNKFELISRDESRTIKAIEELGTQMGIQTPIRIEAFDNSNI
                     QGVDPVSAMVTFVDGKPDKKNYRKYKIKTVIGPDDYKSMREVVRRRYSRVLNEGLPLP
                     DLIIVDGGKGHMNGVIDVLQNELGLDIPVAGLQKNDKHQTSELLYGASAEIVPLKKNS
                     QAFYLLHRIQDEVHRFAITFHRQTRQKTGLKSILDDIDGIGSKRKTLLLRSFGSIKKM
                     KEATLEDFKNIGIPENVAKNLHEQLHK"
     gene            8064..8159
                     /locus_tag="O6Y56_001246"
     CDS             8064..8159
                     /locus_tag="O6Y56_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574501.1"
                     /translation="MLDYHLSFIDLLIPPFSSRKQYDDLSFNFLY"
     gene            complement(8222..8536)
                     /gene="trxA"
                     /locus_tag="O6Y56_001247"
     CDS             complement(8222..8536)
                     /gene="trxA"
                     /locus_tag="O6Y56_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDB5574502.1"
                     /translation="MAIVKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAA
                     DYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDK
                     HL"
     gene            complement(8709..11057)
                     /locus_tag="O6Y56_001248"
     CDS             complement(8709..11057)
                     /locus_tag="O6Y56_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HDB5574503.1"
                     /translation="MRQKTLDVLEFEKIKSLVANETISDLGLEKVNQMMPATNFETVV
                     FQMEETDEIAQIYNKHRLPSLSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQF
                     KTFYNQLVEEDEGVKYPILDDKMNQLPVLTDLFQQINETCDTYDLYDNASYELQGIRS
                     KISSTNQRIRQNLDRIVKSQANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQS
                     ASGQTLYIEPSSVVEMNNQISRLRHDEAIEKERILTQLTGYVAADKDALLVAEQVMGQ
                     LDFLIAKARYSRSIKGTKPIFKEERTVYLPKAYHPLLNRETVVANTIEFMEDIETVII
                     TGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLST
                     FSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLVMATTH
                     YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINK
                     AKTMIGTDEKEINEMIESLERNYKRVETQRLELDCLVKEAEQVHDDLSKQYQQFQNYE
                     KSLIEEAKEKANQKIKAATKEADDIIKDLRQLREQKGADVKEHELIDKKKRLDDHYEA
                     KSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLEIVNDEEAIVQMGIIKMKLPIEDLE
                     KKQKEKVKPTKMVTRQNRQTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIH
                     GKGTGALQKGVQQHLKKHKCVSDFRGGMPSEGGFGVTVATLK"
     gene            complement(11067..12779)
                     /gene="polX"
                     /locus_tag="O6Y56_001249"
     CDS             complement(11067..12779)
                     /gene="polX"
                     /locus_tag="O6Y56_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase/3'-5' exonuclease PolX"
                     /protein_id="HDB5574504.1"
                     /translation="MTKKDVIKLLEQIATYMELKGENTFKISAYRKAAQSLELDERPL
                     DEISDVTELKGIGKGVAEVINDYRETGESQYLQQLQEEVPEGLIPLLKIQGLGSKKIA
                     KLYKELNIVDKASLQVACENGKVSELSGFAKKTEQNILEAVKQLGAKKDRYPIDQMRR
                     LNQEIIDYIDTLNYIDQYSSAGSFRRFKEMSKDLDFIISTDNPKAVQQQLLNIPNKVK
                     EVAVGNTKVSLELAYDDETIGVDFRLIEPSAFYHTLQHFTGSKEHNIRIRQLAKARDE
                     KVSEYGIEQADGTLIQYDSEAKIYEHFNVNFIPPAMREDGSEFDKDLSNIITLDDING
                     DIHMHTTYSDGAFSIRDMVEANIAKGYKFMVITDHSQSLRVANGLQVERLLRQNEEIK
                     ALDKEYSEIDIYSGTEMDILPDGSLDYDDEILAQLDYVIGAIHQSFNQSEEQIMERLA
                     NACRNPYVRHIAHPTGRIIGRRDGYKPNIEQLMALAEETNTVLEINANPHRLDLNADI
                     VRKYPNVKLTINTDAHHTNHLDFMNYGVATAQKGFVTKDRVINALSREAFKDFIENNI
                     KLKK"
     gene            complement(12852..13373)
                     /locus_tag="O6Y56_001250"
     CDS             complement(12852..13373)
                     /locus_tag="O6Y56_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDB5574505.1"
                     /translation="MVIDFIIIIFFVYFVIVGFRRGFWLSMIHLSATIVSLWIASQFY
                     KSIVERLIVFIPYPKTTAFNTTFAFHFNHLQNRFEAIVAFLMITLFCKFILYLIIVTF
                     DKIIAYQNIHIFSRAMGMIVGVFMTIIVLNFTLYLLALYPNEALQHQLKISIVSHSLI
                     FHIPYLSAFTINL"
     gene            complement(13374..13640)
                     /gene="zapA"
                     /locus_tag="O6Y56_001251"
     CDS             complement(13374..13640)
                     /gene="zapA"
                     /locus_tag="O6Y56_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000046705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HDB5574506.1"
                     /translation="MAQFKNKVNVSINDQLFTIVGEDNPEHIRYVAHLVDDKIKELGY
                     KAAGLDTSRKAILTAVNIMHEKVLLEEENRRLKQQIHKLQQREQ"
     gene            14015..14953
                     /locus_tag="O6Y56_001252"
     CDS             14015..14953
                     /locus_tag="O6Y56_001252"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HIII"
                     /protein_id="HDB5574507.1"
                     /translation="MANIVFKLSDKDITTLMSRISFDTENLPQGMKARAKYQNTTVNI
                     YQSGKVMFQGNHAEAVSEELLPQLSQLNTNKTKKKNMANSFLEQTLMYDQFNCIGSDE
                     AGSGDYFGPLTVCAAFVTKEHVPILKTLGVDDSKKLTDTKIVELAEQLVTFIPHSLLT
                     LHNEKYNIQQAKGWTQVKMKAVLHNEAIKNVLEKIDSSQLDYIVIDQFAKREVYSHYA
                     LSDIPLPKKTKFETKGESKSLAIAVASIISRYAFVTYMDQISKNINMTIPKGAGAKVD
                     VIAAKIIKKYGISRLDTISKKHFKNREKAQKILKPL"
     gene            complement(15255..17657)
                     /locus_tag="O6Y56_001253"
     CDS             complement(15255..17657)
                     /locus_tag="O6Y56_001253"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDB5574508.1"
                     /translation="MLISNEWLKEYVTNDDSVSNLAERITRTGIEVDDLIDYTKDIKN
                     LVVGFVKSKEKHPDADKLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLPGG
                     IKIKRAKLRGERSEGMICSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLD
                     DQVMEFDLTPNRADALSMIGTAYEVAALYNTKMTKPETTSNELELSANDELTVTIENE
                     DKVPYYSARVVHDVTIEPSPIWMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQ
                     DAIGSQQIVVRQANEGEKMTTLDDTERELLTSDIVITNGQTPIALAGVMGGDFSEVKE
                     HTSNIVIEGAIFDSVSIRHTSRRLNLRSESSSRFEKGIATEFVDEAVDRACYLLQTYA
                     NGKVLKDRVSSGELGAFITPIDITADKINRTIGFDLSQNDIVTIFNQLGFDTEINDDV
                     ITVQVPSRRKDITIKEDLIEEVARIYGYDDIPSTLPVFEKVTSGQLTDRQYKTRMVKE
                     VLEGAGLDQAITYSLVSKEDATAFAMQQRQTIDLLMPMSEAHASLRQSLLPHLIEAAS
                     YNVARKNKDVKLFEIGNVFFANGEGELPDQVEYLSGILTGDYVVNQWQGKKETVDFYL
                     AKGVVDRVSEKLNLEFSYRRADIDGLHPGRTAEILLENKVVGFIGELHPTLAADNDLK
                     RTYVFELNFDALMAVSVGYINYQPIPRFPGMSRDIALEVDQNIPAADLLSTIHAHGGN
                     ILKDTLVFDVYQGEHLEKGKKSIAIRLNYLDTEETLTDERVSKVQAEIEAALIEQGAV
                     IR"
     gene            complement(17657..18715)
                     /gene="pheS"
                     /locus_tag="O6Y56_001254"
     CDS             complement(17657..18715)
                     /gene="pheS"
                     /locus_tag="O6Y56_001254"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDB5574509.1"
                     /translation="MSEQQTMSELKQQALVDINEANDERALQEVKVKYLGKKGSVSGL
                     MKLMKDLPNEEKPAFGQKVNELRQTIQNELDERQQMLVKEKLNKQLAEETIDVSLPGR
                     HIEIGSKHPLTRTIEEIEDLFLGLGYEIVNGYEVEQDHYNFEMLNLPKSHPARDMQDS
                     FYITDEILLRTHTSPVQARTMESRHGQGPVKIICPGKVYRRDSDDATHSHQFTQIEGL
                     VVDKNVKMSDLKGTLELLAKKLFGADREIRLRPSYFPFTEPSVEVDVSCFKCKGKGCN
                     VCKHTGWIEILGAGMVHPNVLEMAGFDSSEYSGFAFGMGPDRIAMLKYGIEDIRHFYT
                     NDVRFLDQFKAVEDRGDM"
     gene            complement(19096..19836)
                     /locus_tag="O6Y56_001255"
     CDS             complement(19096..19836)
                     /locus_tag="O6Y56_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HDB5574510.1"
                     /translation="MEQITSAQNNRIKQANKLKKKRERDKTGLALIEGVHLIEEAYQS
                     GIVITQLFAIEPARLDQQIIAYAQEVFEINMKVAESLSGTVTPQGFFAIIEKPQYDIS
                     KAQQVLLIDRVQDPGNLGTLIRTADAAGMDAVIMEKGTTDPYQDKVLRASQGSVFHLP
                     VMTQDLDTFITQFIGPVYGTALENAVTYKEVTSSDSFALLLGNEGEGVNPELLAHTTQ
                     NLIIPIYGKAESLNVAIAGSILIYHLKG"
     gene            complement(20076..20183)
                     /locus_tag="O6Y56_001256"
     CDS             complement(20076..20183)
                     /locus_tag="O6Y56_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574511.1"
                     /translation="MVLLTFVTTIHDTDDGRFFNEHKHANNKLLKRSLI"
     gene            complement(20220..20543)
                     /gene="isdG"
                     /locus_tag="O6Y56_001257"
     CDS             complement(20220..20543)
                     /gene="isdG"
                     /locus_tag="O6Y56_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylobilin-forming heme oxygenase IsdG"
                     /protein_id="HDB5574512.1"
                     /translation="MKFMAENRLTLTKGTAKDIIERFYTRHGIETLEGFDGMFVTQTL
                     EQEDFDEVKILTVWKSKQAFTDWLKSDVFKAAHKHVRSKNEDESSPIINNKVITYDIG
                     YSYMK"
     gene            complement(20562..>21238)
                     /gene="srtB"
                     /locus_tag="O6Y56_001258"
     CDS             complement(20562..>21238)
                     /gene="srtB"
                     /locus_tag="O6Y56_001258"
                     /EC_number="3.4.22.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="class B sortase"
                     /protein_id="HDB5574513.1"
                     /translation="FGYKIVQTYIEDKQERANYEKLQQKFQMLMSKHQAHVRPQFESL
                     EKINKDIVGWIKLSGTSLNYPVLQGKTNHDYLNLDFEREHRRKGSIFMDFRNELKNLN
                     HNTILYGHHVGDNTMFDVLEDYLKQSFYEKHKIIEFDNKYGKYQLQVFSAYKTTTKDN
                     YIRTDFENDQDYQQFLDETKRKSVINSDVNVTVKDKIMTLSTCEDAYSETTKRIVVVA
                     KIIKVS"
BASE COUNT         6589 a         4032 c         2912 g         7705 t
ORIGIN      
        1 ttattaacta aacattaata tttgtgtcac tacatttctg aatttcaaga attttgctac
       61 tccatatttt aaccatcaaa ttattgatat aatttatgcc tttagaaatc cttttaaata
      121 tgtatacgat tcatgatttt aactaaaatt tcaaatttcc tgacttctta gaatcttaat
      181 tttatacttt ttaacaatac acttttaacc aaataatcaa catgattcaa ccatatagaa
      241 ccatcaacaa tcacattccc caaaattaca attcttttca taacataaat gtgttattca
      301 ttccagttat cttataaaat tgtcagaaat acttttaaat aaacattcat gtcacgacct
      361 cctagttaaa tcagtctata aactaaaaaa agccatagct actttctatt taaaaagtag
      421 tatgacttat tgtttcgtga tgtcgatttt tgaaattgat ggtgccatgt aaagtttgat
      481 catcaataat aacttcagca tatgtttctt ccattgaact tctagattga gatatacttc
      541 caggattaat aacatgaaca ccattaatat actcatattt tgccacatgt gtatgtccat
      601 aaaatgcaaa caaacaacct aattcaagtc cttttttagc taataaatct cttgttcgat
      661 tgacttgata taaatgccca tgagtgtaaa atgctttcac gccattacat tttgcgaccg
      721 cttcattttc aaattctgga taaaaatcac aattgccttt tactctatta aataagctaa
      781 gttccgtatc atcatacgcg aattctgaat ctcctaaatg taaatataca tctgcatctg
      841 ggtgcatttc ataaatttga tataaaacgc ctgattcagt atggttatca ctaacaataa
      901 tccatttaga catttttatc accttcaaga aaagcttgaa gtaaattaat cgcatttcgt
      961 ctatgactaa tttgcccttt ttgttcttta gaaagttgag ccatggtttt atctaatttc
     1021 ggtacataaa atatcggatc atatccgaaa ccattttcac catattttcc atctgcaatt
     1081 tcacctgaaa cagtaccttt aaatactttt gtttccatat cagggccact catacttatg
     1141 acacaaacaa attgcgcacg acgatcagtt gtattaccaa gcttatttaa taatttttca
     1201 atatttgctt catcgctttt attttcacca gcataacgtg cagagtatat acctggctca
     1261 ccatttaatg caaaaacttc tagtccactg tcatcagcta tgaccgtttt attcaatgct
     1321 tttgcagcag cttctgattt taatatagca ttttcttcaa atgttgatcc tgtttcttcc
     1381 acatcaaaat ctggtattag ttccgaaata cctattacgt ggtaatctgg aaatatcact
     1441 ttaaagtcat ttattttccc ttgattattc gatgcaataa caatctcttt cattaaaaat
     1501 cctcctagtc attcactgat atacgttcca cattgacaga taaatttaac cactctttga
     1561 taatgttagt aatgtgaata ggatcacctg ttgcaaaaaa tcgatgatct ggatgttcag
     1621 tataacttgc atgttcatta ctaaatgtta gcaatgcact aacttcacga gccgtttcta
     1681 atccagacga aatcactgtc tttttaccac caaaataatc atagataggt ttatagagca
     1741 atggatagtg ggtacatcct aaaatgacag tatcagactc actattacgc caacgtttca
     1801 gtgtttgatg aatgacaatg cttgtaattg ttggatcact atatctcatt tgttctacaa
     1861 gtggcacaaa acctggacag gcaacgccat gtacctctac atgtggattt atacgtttaa
     1921 tatgcgtacg atatgcttca gatttaattg taccttccgt tcctagtact aatacatttt
     1981 gatttctagt agtcattatt gctgttctag cacctggttc aattacgcca atcactggga
     2041 ttgataaggt cttttgtaaa tattctaaag ctacagcagt tgctgtatta caagcaatca
     2101 cgagcatttt tatatcaaat tccattaatt tacgagcgat ttcaactgta tattgtttta
     2161 cttgttctcc tggtcttggc ccatatggac atcgcccaat atcacctaag taataaatcg
     2221 tctcatttgg caactgacgc ataatttctt tagctactgt caaacctccg acaccagagt
     2281 ctattacacc tattggttta ttcatattcg gtcatcctta cttttaattt aatttttagt
     2341 ttatcataac taagcattgg attttagtat tatgcactgt gtttaccatt tttgtcatta
     2401 taatataata cttgttttaa atcagcccac tatcatattg tcatgtaatc tgcctattaa
     2461 aaaaatccct tctaagttat tgtgtatctc cattcaattt aattttgaaa ggaacataac
     2521 attttaactc aaaagggatt aatttttatt ctacttcatg gtctgaacca aagaatgatt
     2581 taaacatatg gaatgttgtt tctctgttca ttgctgcaat ggatgttgtt aatggaatac
     2641 ctttagggca agcattaaca cagttttgtg aattaccaca ttgctgtaag ccacctgtac
     2701 ccattaacgc atttaaacgt tcatccttag tcatagatcc tgttgggtgc aaattaaaca
     2761 aacgaacttg cgagattgct tgcgcaccaa caaatttatt attttcagta acattaggac
     2821 aaacttctaa acatacacca catgtcatac atttagataa ttcataagct gtttgacgtt
     2881 ttttctctgg catacgtggt cccggaccta aatcatacgt tccatcgatt gggatccatg
     2941 ctttcatacg ttttaagtta tcgaacattc tagaacgatc aacttgtaag tcacggataa
     3001 ctgggaaagt attcattggc tctaaacgaa taggttgttc taattgatca acaatcgcag
     3061 aacaagattg tcttgcacga ccattgataa ccatagaaca tgctccacat acttcttcta
     3121 aacagttcat atcccagaca acaggtgttg ttttttcacc tttaatattc actgggttac
     3181 gtctaatttc cattaaacat gcaatgacgt ttaaattttc acgatatgga atttcaaatg
     3241 tttcttcata aggcttagaa tcacttgtat cttgtcgttt aataattaat tttactgttt
     3301 tttgtttcgg tttagattgt gtttcatgtt gtggagtgtt tttcactgat tgttcagtca
     3361 ttatttttta ccccctttag acttacttgt gtaatcacgt ttacgaggtg gtattaaact
     3421 cacatcgacg tcatcataag taaactgtgg tttttcaaat gcgccttgga atgaggccat
     3481 tgtcgttttt aaccactctt catcattacg ctctgggaat tctggtttat aatgggcacc
     3541 gcgtgattcg ttacggttat atgcaccaat cgtaataaca cgtgcaagta ctaacatgtt
     3601 ccataattga cgagtaaaga ataccgcttg gttactccaa gtttgagtat cttccatatc
     3661 aatatcttca taacgtttca tcaattcaac aatcttttta tctgtttcta acagtttttc
     3721 attttcacga acaacagtta catttgctgt cataatttca ccaagttcac ggtgtaattt
     3781 atatgcattt tctgtaccgc gcatagctaa taatttatca aaacgttctt gctcttcagc
     3841 tttacgtttt tcaaaaatac tttcgtccat atcagtatat gatcgatcaa tatttgaaat
     3901 atactcaatc gcgtttggac ctgctactgt accaccataa atcgctgata acaatgaatt
     3961 ggcacctaag cggttaccac catgttgaga gaagtcacat tctccagctg caaataaccc
     4021 tttaatattt gtcatttgat cataatctac atatagacca cccattgaat agtggacagc
     4081 tgggaaaatc ttcattggta ctttgcgtgg gtcatcacca gtgaattttt cataaatttc
     4141 aatgatacca cctagtttga catctaactc atgtggatct ttatgtgaca aatcaagata
     4201 taccatgttt tcgccattaa tacctaattt ttggttaata catacatcga aaatttcacg
     4261 cgttgcgata tcacgaggta ctaagttacc ataatcagga tatttctctt ctaagaagta
     4321 ccaaggctta ccatctttat atgtccaaat tcgtccacct tcaccacgtg ctgattcact
     4381 cattagtcgt agtttatcat caccaggtat tgcagtagga tgaatttgaa tgaactcacc
     4441 attagcataa atagcgcctt gttggtaaac aatggaagcc gctgatcctg tattaatcat
     4501 tgagtttgtt gttttaccga aaataatacc agggccaccc gttgccataa taactgcatc
     4561 tgatccaaat gtttcaatct cagcagttgt catattttgt gcaacgatac ctcttgcact
     4621 atcatcgtca cctttaacta tgccaaggaa ttcccatcct tcatacttcg taactaatcc
     4681 atctacttca tatgcacgaa cttgttcatc caatgcatat aataattgtt gtccagttgt
     4741 tgcccctgca tatgctgttc tgtggtgtaa tgtaccaccg aaacgtctaa aatctaatag
     4801 accttcattt gttctattga acattacgcc catacggtct aataaatgaa taattttagg
     4861 tgctgcctct gtcatcgctt taacaggtgg ttggtttgca aggaagtcgc caccatacac
     4921 tgtatcatca aagtgaatcc aaggagaatc gccttcccct ttagtattga ccgcaccatt
     4981 aatgccacct tgggcacaaa cagagtgcga acgctttact ggtacaactg agaataaatc
     5041 tacatgtgca cctttttctg ccgctttaat tgttgacatt aagcccgcta ggccacctcc
     5101 gacaacaata agatgtttct ctgccataaa aatgtcactc ccctaaattt tcaatctata
     5161 tttgttaaat gcgatgtatt acataaaggc aataattgca gtaacaccaa tatacgaaat
     5221 aactaagaat acgattaatg aaacccatgt aaatactcgt tgtgattttg gagattgaag
     5281 tccaccccaa gtaactaaga atgaccataa gccatttgca aagtggaaca caacagcaat
     5341 aatacaaata atataaaata ttgcccatcc aggatgttgc aatgtttcgt gcattaaatc
     5401 gtaattcact tctttgccgt aaaatgcttt ttgtaaacgt gtttgccata aatggatacc
     5461 aataaagata aatgttaaga taccactcac tctttggaag aagaacatcc agtttctaaa
     5521 aatcgagtaa tgtccaacat tttcttttgc tgtaaatgca atgtgtatac caaacaaacc
     5581 gtgatataac aacggaatgt atataaataa aaattctaca ataattagaa atggtaatga
     5641 ttccataaag ttagatgcct tattaaacgc ttcagcacct tgtgttgctt ggtgattcac
     5701 taataaatga acgaccaaaa atgcacctat tgggataata cctaataacg agtgaatacg
     5761 tcttagataa aattcatttt ttgattgagc caaaaggagt cccccctgtg aacgaatatt
     5821 taatttattg agctatttat attaaacgta cgcttaaccc cctaaagtga tatcgtttct
     5881 agcgttgtca ttatcattaa gcgaaacaaa ttaaagacaa atacacactg cacgatcacc
     5941 aaactgcatg tcgaacaatg taacatttgg attcgatatt taagattgct tatgatgata
     6001 aactttctca tttagaaaac gcttccacgt acattcaaaa aaataacttt gttaaccata
     6061 ttgtaacatt atttcatata ttttggggca tgagaatgat tctcacgccc tgtaatttat
     6121 ttatgcaatt gttcatgtag gttctttgca acgttttcag gaatacctat atttttaaaa
     6181 tcttcaagtg tagcttcctt cattttcttg attgaaccga atgaacgcaa taataatgtt
     6241 ttacgtttgc taccgatacc atctatatca tcaagtattg atttcaagcc ggtcttttga
     6301 cgtgtttgtc tatgaaaggt gattgcgaat ctgtgaacct catcttggat acggtgcaac
     6361 aaataaaatg cttggctatt tttcttcagt ggtacaattt ctgcactagc gccatataat
     6421 aattcagatg tttggtgttt atcatttttt tgcaaacctg caacagggat atcaagacct
     6481 aattcgtttt gtagcacatc aataaccccg ttcatatgtc ctttaccacc atctactatt
     6541 attaaatcag gtaatggtaa tccttcgttt aaaacgcgag aatatcgtcg tcttactact
     6601 tctctcattg atttgtaatc atctggacct ataaccgttt tgattttata ctttctataa
     6661 tttttcttgt ctggtttacc gtcgacaaat gtaaccattg ctgacactgg atccacacct
     6721 tgaatattag aattatcgaa tgcttcaatt ctaattggtg tttgaattcc catttgtgtt
     6781 ccaagttctt caatagcttt aattgttctg gactcatcac gtgatattaa ttcaaattta
     6841 ttatttaagg atactttagc gttatgtgca gctaggtcaa ccatatcttt tttgggacct
     6901 cgcgcgggtt gaacgatttt agtgtccaca acagattgaa tcatttcttt atccaaatta
     6961 cgtggtacat gaacttcctt aggtaaaata tgttggttta agctataaaa ttgtccaata
     7021 aatgtataaa attcttcttc ttctgtttgc tgtaatggaa tcatcgttgt atctcgcttt
     7081 atcatattac cttgtcgtat aaagaaaact tggatacaca tccatccttt atcaacacta
     7141 taaccaaaga catcacgaat cgttttatct gatgacataa ttttttgttt gttagttaga
     7201 ttttgaatat gttgaattaa atctctatat tctttagctc gttcaaaatc aagtgattca
     7261 cttgcagtta acattcgctc ttctaaactt tttaaaattg ttttgtcttc cccattcaga
     7321 aaatcagtaa tttccttcgt catttgtgcg tatttactca aatcaacgtc atatacacat
     7381 ggtcctaaac attgtccaat atggtaataa agacataatt tatctggcat cttatcacat
     7441 ttgcgatatg gatatattct gtctaataat tttttagttt cttgagcaga atatgcattc
     7501 ggatacggtc cgaaatattt gccagtacct tgttttacag ttctcgtcac tagtagtcta
     7561 ggatattttt ccttcgtaat tttaataaat ggataacttt tatcatcttt taataaaatg
     7621 ttgtatctag gttgatattg tttaatcaga ttcaattcaa gtaaaagtga ctctgtttca
     7681 ctagacgtga caataaactc aaagcgacgt atttcaccaa ccagtctcgt tgttttagca
     7741 tcatgagcgc ccgtaaaata tgatcgcaat cgatttctta gctttttagc tttgccaaca
     7801 tatatcactt gatcattacg atctttcatt aaatagcagc ctggttccat aggtacgaca
     7861 tttaatttat ttttaattcg ttgcttatag tcttccaaaa atatcccccc ttctaatttt
     7921 aaaatgaatg atactacaaa agtgcttcaa atttatcacc actaattcta gttcatagtc
     7981 aacatcttcg agtatgactt ttcatgcaca tcatgtaata ttgaacattg ttttatcaaa
     8041 ccaactgcta catgtctatt agcatgcttg attatcattt atcgttcata gatttattaa
     8101 tcccaccatt ctcaagtcgt aaacaatatg atgacttatc attcaacttt ttatattaaa
     8161 aacacaaaca aaaaatggag caattcatta aagaaatgcc ccagtcgtca ttggttgtaa
     8221 cttataaatg tttatctaaa acttcagcta agttttcttt tggttggaaa ccaacaactt
     8281 tatcaactgg ttgaccgtct ttaaagacga ttaatgttgg aatactcatc acttcatatt
     8341 tagctgcagt tgatggattt tcatcaacat ctaattttaa aatgtcagct ttaccttcat
     8401 agtcagctgc taattcttct aatactggag cgatcatttt acatggacca caccatgttg
     8461 cccaaaaatc tactagttgt acaccagatt ctacttttga atcaaaatct gcatctgtta
     8521 cttttacgat tgccataaat gccaatcctc cttaattatt attatgatgt tcaaattata
     8581 tcagataaca tgcttcatgt atttctattt gctcaatttt tatgcttatt tcaaataaca
     8641 tgtttgaaat gtattcttgt tgctttacat tattttaact gcagctattt aatttatcaa
     8701 attataattt attttagagt tgcaacggta acgccaaatc caccttcgct tggcatacca
     8761 cctctaaagt cactaacaca tttatgcttt ttcaaatgtt gttgtacacc tttttgaagt
     8821 gcacctgtac ctttaccatg aatgatataa acttgttcgt aattacttaa aacggcttga
     8881 tctaaatatt gatctagttc aattaaagca tcctcataac gatagcctcg taagtcaagt
     8941 tcagttttaa ttgtttgacg attttgacgt gtaaccattt tcgttggctt aactttttct
     9001 ttttgttttt tctctaaatc ttcaataggt aacttcattt taataattcc catttgaaca
     9061 attgcttctt catcattgac aatttctaaa acttcaccct tttgaccgta agataatact
     9121 tttacttcat caccagcaac aattttatcg tatttttgtt tttgtacatt ttgctttata
     9181 gatttcgctt cataatgatc atctaatcgt ttcttcttat caatcaattc atgttcttta
     9241 acatctgcac ctttttgttc acgcaattgt cttaaatctt taataatatc gtcggcttct
     9301 tttgttgcag ctttaatctt ttgatttgct ttttctttcg cttcctctat tagagacttt
     9361 tcataatttt ggaattgttg atactgctta gataaatcat catgcacttg ctccgcttct
     9421 tttacaagac aatccagttc taacctctgt gtctctacac gtttgtaatt acgctctaat
     9481 gattcaatca tttcatttat ttctttttca tcagtaccaa tcatcgtctt agccttatta
     9541 ataatattca aactaagacc taacttttta gaaatgtcaa aagcatttga acgacccggt
     9601 acacccatta ataacttata cgttggactc aaagtatcta catcaaattc tacactcgca
     9661 ttcataacgc cttctcgatt ataactatat gctttaagtt caggatagtg cgtcgttgcc
     9721 attactagag aaccaatttt tctaacatgg tctaaaatgc tcattgctaa agcagcacct
     9781 tcacttggat ctgtacctgc acctaattca tcaaataaaa ctaaactatg tttgtctgca
     9841 tgctttaaaa tctcaactat attcgtcata tgagatgaaa aagttgataa tgattgttct
     9901 attgattgtt catctccgat atcgcaatat acatttttaa atacactcaa ctgactacca
     9961 tcaagtgttg gaatcaacaa tcctgattga gccataacaa taattaaacc taatgttttt
    10021 aatgttactg ttttgccacc tgtattcggt cctgtaataa ttaccgtttc aatatcttcc
    10081 ataaattcga tggtattagc tacaacagtc tcacgattta ataatggatg gtatgcttta
    10141 ggtaaatata cagtacgttc ctctttaaat atcggctttg ttcctttaat acttctacta
    10201 tatctcgctt ttgcgattaa aaaatctaac tgacccatga cttgttctgc cacaagcagt
    10261 gcatctttgt ccgcagccac ataaccagtt agttgcgtta aaatgcgttc tttttcaatt
    10321 gcttcatcat gacgtaatcg actaatttga ttattcattt caacaactga tgatggctca
    10381 atatacaatg tttgtcctga agcagattga tcatgtacaa tcccattaaa atcttgtcga
    10441 tattcagctt tgacaggtat aacgtttctt tcattcctaa ctgttacaat agcatctgat
    10501 aattttttct gatttgcttg acttttaaca atacggtcca aattttgtct aatacgttga
    10561 ttcgtgctag aaattttact tctaatccct tgcaattcat aactcgcatt atcatataaa
    10621 tcgtacgtat cacatgtttc atttatttgt tgaaaaagat ctgttaacac aggtaattga
    10681 ttcatcttgt catctaatat tgggtattta acaccttcat cttcttcaac caattgatta
    10741 taaaatgtct taaattgatt ttgtacttga attaatcttt ttatcaagtt aagctctgat
    10801 acatttaaaa cgccgccaat atcagcgcga tgaatgaatg ctgatacttt agataagcca
    10861 ctcaagcttg gtaaacgatg cttattatag atttgagcaa tctcatccgt ttcttccatt
    10921 tgaaaaacaa ccgtttcaaa attagtagct ggcatcattt gattgacctt ttccaagcct
    10981 aagtcactaa ttgtttcatt ggcaacgagt gattttattt tttcaaattc taagacgtct
    11041 aatgtttttt gtctcataaa atccctctat ttcttaagtt ttatattatt ttcaataaag
    11101 tctttaaaag cttcacgcga taatgcgtta atcactctat cttttgttac aaatcctttt
    11161 tgcgcagttg ctacgccata attcataaaa tctaaatgat ttgtatgatg cgcatcagtg
    11221 ttaatagtta atttcacatt tggatattta cgaacgatat cagcgttcag atccagtcga
    11281 tgtggattgg cattaatttc taatactgta ttcgtttctt cagctaatgc cattaattgt
    11341 tcaatattcg gtttataacc atctcttcta cctataatac gccctgttgg atgcgctata
    11401 tgtcgcacgt atggattgcg acatgcatta gctaatcgtt ccataatttg ttcttctgat
    11461 tggttaaagc tttgatgaat agctccaatt acataatcaa gttgtgctaa aatttcatca
    11521 tcataatcca gtgagccatc aggtaatata tccatttctg tacctgaata aatatcaatt
    11581 tcactatatt ctttatctaa agctttaatt tcttcgtttt gtcttaaaag tctttctact
    11641 tgtaagccat tagcaacacg taaactttgt gaatgatcag taattaccat gaatttataa
    11701 ccttttgcga tatttgcttc taccatgtct cgaatagaaa acgcaccatc actatacgtt
    11761 gtatgcatat gaatatctcc attaatatca tctaatgtaa tgatattact tagatcttta
    11821 tcaaattcgc taccatcttc tcgcatagca ggtggtataa aattcacatt aaaatgttca
    11881 tatattttgg cttcactatc atattgaatt aatgtaccat cagcttgttc aattccatat
    11941 tcacttactt tttcatcacg tgctttagca agttgtcgaa ttcttatatt atgttctttt
    12001 gacccagtaa aatgctgcaa tgtatgataa aaagcacttg gctcaattaa tcgaaaatcg
    12061 acaccaattg tttcatcatc atacgctaat tctaatgaaa cttttgtgtt ccccactgca
    12121 acttctttta ctttattggg aatatttaat aattgttgct gcactgcttt tgggttatcg
    12181 gtacttatta tgaaatctaa atctttgctc atttctttaa aacgacggaa gcttcctgca
    12241 gatgaatatt gatcgatata atttaatgta tctatataat caattatttc ttgattaagt
    12301 cttctcattt gatcaattgg atatctatct ttcttagcac caagttgttt cacagcttct
    12361 aatatgtttt gttccgtttt cttagcaaat ccgcttaatt cactaacttt tccattttca
    12421 caagcaactt gaagtgaagc tttatcaaca atattcaact ctttatatag cttagcaatt
    12481 ttcttgcttc caagtccttg aattttcaaa agtggaataa gaccttctgg aacttcttcc
    12541 tgtaattgct gtaaatactg agattcaccg gtctcacggt aatcattgat tacttctgca
    12601 acacctttac caatgccttt taactccgtt acatcagata tttcatctaa tggtcgttca
    12661 tctaattcaa gactttgagc tgcttttcga tacgctgata ttttaaaagt attttcccct
    12721 tttaattcca tataagtagc aatttgttct aatagtttga taacatcttt ttttgtcata
    12781 ataacactcc ataaaaagaa gaccaggacg tatcattaat atataccttt gtcctgacct
    12841 cttatgataa tttataaatt aatggtgaaa gccgataaat atgggatgtg aaaaatcaat
    12901 gaatgactca caatagatat tttaagctga tgttgtaatg cttcgttagg atataatgcc
    12961 aatagatata acgtaaagtt taagacaatt attgtcataa acacaccaac tatcattccc
    13021 attgcacgac tgaaaatatg aatgttttga tacgctatta ttttatcaaa agttacgata
    13081 attagatata aaatgaactt acaaaacaat gtaatcatta aaaaagctac aatcgcttca
    13141 aatcgatttt gtagatgatt aaaatgaaac gcaaaagttg tattaaatgc tgttgtttta
    13201 ggatatggaa taaatacaat taatctttct acaatagatt tgtaaaattg actggcaatc
    13261 cacaatgata caatcgttgc actcaaatgt atcatagata accaaaaacc tcgtctgaat
    13321 ccaacgatga caaaatacac aaagaaaatg attatgataa aatcaatgac catttattgc
    13381 tcacgctgct gcaatttgtg aatttgttgt ttcaaacgac gattttcttc ttctaatagt
    13441 actttttcat gcataatatt cacagcagtt agtattgctt ttcttgaagt atctaaacct
    13501 gctgctttat accctaattc ttttatttta tcatcaacta aatgtgctac atatcgtatg
    13561 tgctctgggt tatcttcccc aacaattgta aaaagctgat cattaattga tacatttacc
    13621 ttgtttttaa actgtgccat ttataatttc tcctgatcct ttttttaaaa tctaaattca
    13681 cgttataaaa tatgactgga tagtttgtct gaatttgata ctaatattgt tatattgcaa
    13741 ttatgataaa acaacaacac aatctctata gatgacttaa tgttcttttt ataatgaaat
    13801 gaaataatgt aaagaatttt ctattcaata ctttatcatg tttaaattgt gtcactataa
    13861 cattttcata aacattatac atgaccacta tgtattttgt aagtatccgc aattaattct
    13921 ttacaacata tataaatgtt tctgacgtta ttatcattta tgatatgatt atttttgcta
    13981 atgataatga aattatatga aaggatttac acaaatggcg aatatcgttt ttaaattgtc
    14041 ggataaagac ataacgacat taatgtcacg catttctttt gatactgaga atttacctca
    14101 aggtatgaaa gcacgtgcaa agtatcaaaa tacaactgta aatatttacc aatcaggtaa
    14161 agtcatgttt caaggtaatc atgcagaagc tgtgtctgaa gaacttctac cgcagctttc
    14221 tcaattgaat actaataaaa ctaaaaagaa aaatatggct aattcttttc ttgaacaaac
    14281 tttaatgtat gatcaattta actgtattgg tagtgatgaa gctggaagtg gcgattactt
    14341 tggtccattg actgtatgtg ctgctttcgt taccaaagag catgttccta ttttaaaaac
    14401 tttgggtgta gatgattcaa aaaaattaac cgataccaaa attgtagagc ttgctgaaca
    14461 attggttact ttcatcccac attcactttt aacactacac aatgaaaaat ataatattca
    14521 gcaagcaaaa ggctggactc aagtaaaaat gaaagctgtt cttcataatg aagccatcaa
    14581 aaatgtactt gaaaaaattg attcgtctca attagactat atcgtcattg atcagttcgc
    14641 aaaacgcgaa gtgtatagcc attacgcatt atccgatata ccacttccaa agaaaacaaa
    14701 atttgaaaca aaaggagaat cgaagtcatt agccattgca gtggcaagca taatttctag
    14761 atacgcattt gttacgtata tggatcaaat atcaaaaaat attaatatga caattcctaa
    14821 aggtgccggt gctaaagtcg atgtaatcgc cgccaaaatt ataaaaaaat acggtatttc
    14881 acgtttagat accatttcaa aaaagcattt taaaaatcgt gaaaaagccc aaaaaatttt
    14941 aaagcctctt tgatttttaa tcattagagg cttttatgca gttgtgcgaa gcatcaactg
    15001 tattccgctg tgcctctttg atttataatc aagataaatt ggatcctaat aggaaatcct
    15061 attaggtaag tcatactaat ttgctttgct cataagtatg actttatatg cagttgtgcg
    15121 aagcatcaac tgtattccac tgtgcctctt tgatttataa atgaaatgga acctaatagg
    15181 tgaatccaaa aataaaaccc catgttaagg atatcaatct acttcagata tccttataca
    15241 tggggtttaa atcattatct aataacagca ccttgttcaa ttaatgctgc ttcaatttcc
    15301 gcttgtactt ttgaaacacg ttcatctgtc aatgtttctt ctgtgtctaa ataatttaat
    15361 cgtattgcaa ttgatttttt acctttttct aaatgttcac cctgatatac atcaaagaca
    15421 agtgtgtctt ttaatatatt gccaccgtgt gcatgaatcg ttgataataa atcagctgct
    15481 ggaatatttt gatctacttc taatgcaatg tcacgagaca tgcctgggaa tctcggaatt
    15541 ggctggtaat taatgtaacc taccgacaca gccattaatg catcaaaatt caactcaaaa
    15601 acatacgtac gttttaaatc attatcagct gctaatgttg gatgtaattc accaataaaa
    15661 ccaacaactt tattctctaa taagatttca gctgtacgac ctggatgtaa tccatcaata
    15721 tcagcacgac gataactaaa ttcaaggttt aacttttcag atactctatc cacgacacct
    15781 tttgctaaat agaaatcaac cgtttctttc ttaccttgcc attgattgac tacataatct
    15841 ccagttaaaa taccacttaa atattcaact tgatctggta gttcaccttc accattagca
    15901 aagaagacat tgccgatttc aaataatttt acatctttat ttttgcgtgc cacattatat
    15961 gatgccgctt cgattaaatg tggtaataaa ctttgacgta atgacgcatg cgcttcactc
    16021 attggcatca ataaatcaat tgtttgacgc tgttgcatcg caaatgcagt agcatcttct
    16081 ttagaaacta acgaatacgt aatagcttgg tctaatccag caccttctaa cacttcttta
    16141 accattctag ttttatattg gcgatcagtt agctgaccac tagtaacttt ttcgaagaca
    16201 ggtaacgttg atggaatatc gtcgtaacca tatatacgtg caacttcttc aattaaatct
    16261 tctttaattg taatatcttt acgacgtgat ggtacttgca ctgtaataac atcatcattt
    16321 atttctgtat caaaccctag ttgattaaaa atagtaacaa tatcattttg tgacaaatca
    16381 aatccaatag tgcgattaat tttatcagca gtgatgtcga ttggtgtaat aaatgcacca
    16441 agttctcctg aagatactct atcttttagc acttttccgt ttgcataagt ttgtaataaa
    16501 taacatgcac ggtcgactgc ttcatctaca aattcagtag ctattccttt ttcaaaacga
    16561 ctagatgatt cactgcgtaa atttaaacgt cttgatgtat gacgaatgga aactgaatca
    16621 aaaatagcac cttcaataac tatatttgat gtatgttctt taacttctga aaaatcgcca
    16681 cccataacac cagctaatgc aattggagtt tgtccattag taatgacaat atcgctcgtt
    16741 aataattcac gttctgtatc atctaatgtt gtcatttttt cgccttcatt agcttgacga
    16801 acaacaattt gttgtgaacc aatcgcatct tgatcaaaca tatgcaatgg ttgaccgtat
    16861 tctaatagca cataatttga aatgtcgaca acgttattaa tagggcgtat acctgctttt
    16921 attaagcgtg cttgcatcca aattggtgag ggttcaattg tcacgtcgtg aacaacacgt
    16981 gcactataat atggtacttt atcttcattt tcaattgtca cggttagttc atcatttgca
    17041 gataactcaa gctcatttga tgttgtctct ggcttagtca tttttgtatt atataatgct
    17101 gcaacttcat aagcagtacc tatcatactt aaagcatcag cacgattcgg cgttaaatca
    17161 aattccatta cttgatcatc taaatataaa gcttgtaagg catctgttcc tggaacttgg
    17221 gattcactaa atacataaat gcctgattca aaacttttcg gtatataatt acttgaaata
    17281 ccaatttctt gtaacgaaca aatcatacct tctgaacgtt caccgcgtaa tttggcacgc
    17341 ttaattttaa taccaccagg caatcttcca cctactttag caacaatgac atattgtcct
    17401 gcatcaacgt tcggtgcacc acatactatt tgtacaggtt cgtcttctcc aatatcaact
    17461 tggcaaacat ttaatttatc agcatcagga tgtttctctt ttgacttaac gaaaccgaca
    17521 actaaatttt tgatatcttt tgtgtagtca attaaatcat ccacttcaat accagtgcgc
    17581 gtaatacgtt ctgccaaatt acttacagaa tcatcgtttg ttacatattc tttcaaccat
    17641 tcatttgata tcaacattac atgtcacctc tatcttctac cgctttaaat tgatctaaaa
    17701 atctcacatc attagtatag aaatgacgaa tatcttctat accatatttc aacattgcaa
    17761 tacggtctgg tcccatacca aatgcaaatc cagagtactc tgaagaatca aaaccagcca
    17821 tttctaatac attaggatgt accattccag cacctaaaat ttcaatccat cctgtgtgtt
    17881 tacaaacatt acaacctttt cctttacatt taaaacatga cacatcaact tctacagaag
    17941 gttcagtgaa tgggaagtaa cttggacgta aacgaatttc acgatcagca ccaaataatt
    18001 tcttagctaa caattctaaa gtacctttca aatcactcat tttaacgttt ttatcaacaa
    18061 ctaatccttc aatttgtgta aattgatgac tatgtgtcgc atcatcagag tcacgacgat
    18121 acactttacc agggcaaata attttaactg gaccttgacc atgacgtgat tccatcgtac
    18181 gtgcttgcac tggtgatgta tgcgtacgta ataaaatttc atccgtaata tagaaactat
    18241 cttgcatatc acgtgcaggg tgtgatttag gtaaattcag catttcgaag ttataatgat
    18301 cttgttcaac ttcatatcca ttcacaattt cataacctaa acctaagaat aagtcttcaa
    18361 tttcttctat tgttcgtgtt aatggatgct ttgaaccgat ttcaatgtga cgacctggta
    18421 atgatacatc aattgtttct tcagccaatt gcttatttaa tttttcttta actaacatct
    18481 gttgtctttc atctaattca ttttgaattg tttgacgcaa ttcattcact ttttgaccaa
    18541 acgcaggttt ctcttcattc ggcaaatcct tcatcaattt cattagtccg ctaactgacc
    18601 cttttttacc taagtatttc actttaactt cttgcagtgc acgttcatca tttgcttcat
    18661 taatatctac aagcgcttgt tgttttaact ctgacattgt ttgttgttca gacatatgtc
    18721 actgacctcc ctattcgaac tattcatttt ctatttatca tatttgttgt ttaactaaaa
    18781 aatgactttc atcctcttaa aaaataaggg acgaaagtca tttccgtggt accacccaaa
    18841 tttatgccta agcatacact tgtttaatat tgataacgga ttgtctttcc gacttaaatc
    18901 tctttaagta accaaaaagg tgaaaagact ttaaataatt ggaataactt gcagtcacga
    18961 ttattctccc taaaacaatt atttatataa atgtccatgc ctttttattg gtttatattc
    19021 aattgtgtat gcaatcacgt agaaatgttc tgttaaacaa ttaattataa ttatatcgga
    19081 aaactttcaa cacggtcaac ctttcaaatg ataaattaaa atactacctg caatcgctac
    19141 atttaaactt tcagctttac cataaatagg tatgattaaa ttttgtgtag tatgtgctaa
    19201 taattcagga ttaacacctt ctccctcatt acctaatagt agtgcaaaag aatcacttga
    19261 agtaacttct ttatatgtca ctgcgttttc aagtgctgta ccataaacag gaccaataaa
    19321 ttgagtaatg aacgtatcga gatcttgtgt cataactggc aaatggaaaa cactaccttg
    19381 actcgctcgc aacactttat cttgataagg atctgtcgta cccttctcca ttattacagc
    19441 atccattcca gcagcatccg cagttctaat taatgtgcct aaatttccag gatcttgaac
    19501 acgatcgata agcaatactt gttgtgcttt agaaatatca tattgtggct tctcaatgat
    19561 ggcgaaaaac ccttgtggtg tcactgtacc tgataaagat tcagcaactt tcatgtttat
    19621 ttcaaaaact tcttgcgcgt atgcgataat ttgctgatct aatcttgccg gttcaattgc
    19681 aaataattgt gtaattacaa tcccactttg ataagcttct tcaattaaat gcacaccttc
    19741 aattaaagct aatccagttt tatccctctc acgtttcttt tttagcttgt tcgcttgttt
    19801 aattctatta ttttgtgcag aagtaatttg ttccatagat agctcctcgc tttattttta
    19861 aaaataaaaa tattaatcat taataagatg aaaacatttg attgtatagt taatattaat
    19921 taatcgattt tatcactcat attatttcaa attgtataaa tttcttttat ctatactact
    19981 actataaatc atacgcccca aaatatcatt attaattctt ttcttcttca aaataaatca
    20041 aaatcatata tttgatgatt attttcaaag cacattcaaa tcaaactacg ttttagcaat
    20101 ttgttgttag catgtttgtg ttcattaaaa aaacgaccat catcggtatc atgtatggtc
    20161 gttacaaaag ttaacaatac caattgtcat aacaagtact gcaacctctt taaattcaat
    20221 tatttcatgt aactatagcc tatatcatat gtaattactt tgttattgat aatcgggcta
    20281 ctttcatctt catttttact tctaacatgt ttatgtgctg ctttaaagac atcagatttt
    20341 aaccaatccg taaaagcttg ctttgatttc caaactgtta aaatttttac ttcatcaaaa
    20401 tcttcttgtt ctaaagtttg tgtaacaaac atgccatcaa aaccttctaa tgtttcaatc
    20461 ccatgtctcg tgtaaaatcg ttctataata tcttttgctg ttccttttgt taacgtcagc
    20521 ctattttctg ccataaattt cataattatc ctcttttctt tttaacttac cttaattatt
    20581 tttgcgacaa caacaattct tttcgttgtt tcactatatg catcttcgca cgttgataaa
    20641 gtcattattt tatcttttac cgttacatta acatctgaat taatcacaga tttacgtttt
    20701 gtctcatcta aaaattgttg ataatcttga tcattttcaa aatctgtacg tatgtaatta
    20761 tctttagtag tagttttata tgcactaaat acttgcaatt gatatttacc atatttattg
    20821 tcaaattcaa ttatcttgtg tttttcataa aacgattgct ttaaataatc ttctaacaca
    20881 tcaaacatcg tattatcacc gacatggtgc ccgtataaaa tagtattatg atttaaattc
    20941 ttcaattcat ttctaaaatc cataaaaata ctacctttac gtcgatgttc tcgctcaaaa
    21001 tctaaattta aataatcgtg atttgtctta ccttgtagta ctggataatt taatgatgtt
    21061 cctgataatt ttatccaacc aacaatgtct ttatttattt tttcaagtga ttcaaattgt
    21121 ggtctcacat gtgcttgatg tttgctcatc agcatttgaa atttttgttg taatttctca
    21181 taatttgcgc gttcttgctt gtcttcaata tatgtttgaa caattttgta accaaaaa
//
LOCUS       DALMNS010000039        20996 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.039, whole genome shotgun sequence.
ACCESSION   DALMNS010000039 DALMNS010000000
VERSION     DALMNS010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20996
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.039"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            14..1513
                     /locus_tag="O6Y56_001259"
     CDS             14..1513
                     /locus_tag="O6Y56_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001621943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase FLP"
                     /protein_id="HDB5574514.1"
                     /translation="MTTKKLYFLSISIIILVAISIAIYITLNSNTKTRLTNDSQQQID
                     TIIEHDLQKGHIPGASILIVKNGKVFLNKGYGYQDVDKKVKASPTTKYEIASNTKAFT
                     GLAILKLAQEGRLNLNDAVSKHVPHFKMNYNGQNETITIKQLLAQTSGIPSDITSEDA
                     VTNKNNRLNDVTHAIMGDELHHKPGEEFEYSNMNYDLLGLIIQNVTKQSYTKYITNSW
                     LKPLHMTHTSFKQTNNKSKHDAIGYELQGSTPVVSKPEFNLWDTPSAYMMTSTEDLEH
                     WIKFQLNPPDKYKSLVQQSHKNLSSTIGEPNANAYASGWFTNNDEHLVFHSGTLDNFS
                     SFILLNPKQNYGIVVLANLNSEYVPKLVEHLNTQIVNHKRYSTVASMLNQYKNQFNIV
                     TVLMTTLILLAFIFSAYRAWQMRHGKIILRKSKLTTFLSWLTLCLFIAIALILYALPY
                     LILGSNNWSFVLTWLPIEIKLTLTTTFIALFSMLITILLVLHTTTIKKP"
     gene            complement(1620..2471)
                     /locus_tag="O6Y56_001260"
     CDS             complement(1620..2471)
                     /locus_tag="O6Y56_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDB5574515.1"
                     /translation="MSKIFVTGATGLIGIKLVQRLKEEGHEVAGFTTSENGQQKLATV
                     NVKAYIGDILKADTIDQALADFKPEIIINQITDLKNVDMAANTKVRIEGSKNLIDAAK
                     KHDVKKVIAQSIAFMYEPGEGLANEETSLDFNSTGDRKVTVDGVVGLEEETARMDEYV
                     VLRFGWLYGPGTWYGKDGMIYNQFMDGQVTLSDGVTSFVHLDDAVETSIQAIHFENGI
                     YNVADDAPVKGSEFAEWYKKQLGVEPNIDIQPAQPFERGVSNEKFKAQGGTLIYKTWK
                     DGMNPIK"
     gene            complement(2794..3729)
                     /locus_tag="O6Y56_001261"
     CDS             complement(2794..3729)
                     /locus_tag="O6Y56_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HDB5574516.1"
                     /translation="MKIAIAGSGALGSGFGAKLFQAGYDVTLIDGYTSHVEAVKQHGL
                     NITINGEAFELNIPMYHFNDQPDGSIYDVVFLFPKSMQLKEMMEAMKPHIDNETIVVC
                     TMNGLKHEEVIAQYVAQSQIVRGVTTWTAGLESPGHSHLLGSGPVEIGELVDGGKENV
                     IKVADLLNEAELNGVISKDLYQSIWKKICVNGTANALSTVLECNMASLNESSYAKCLI
                     YKLTQEIVHVATIDNVHLNVDEVFEYLVDLNEKVGAHYPSMYQDLIVNNRKTEIDYIN
                     GAVATLGKQRHIEAPVNRFITDLIHTKESQRHAQD"
     gene            complement(3957..5357)
                     /locus_tag="O6Y56_001262"
     CDS             complement(3957..5357)
                     /locus_tag="O6Y56_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5574517.1"
                     /translation="MDTSKQFRGDNRLLLGIVLGVITFWLFAQSLVNLVVPLQSTYSS
                     DVGTINIAVSLSALFAGLFIVGAGDVADKFGRVKITYVGLILNVVGSLLIIITPLPAF
                     LIIGRIIQGLSAACIMPSTLAIINEYYIGTRRQRALSYWSIGSWGGSGICTLFGGLMA
                     TYIGWRSIFVVSILLTLLAMYLIKHAPETKAEPIKGMKAEAKKFDVIGLVILVVTMLS
                     LNVIITQTSHFGLVSPLILGLIVVFICSLVGFVYYENKIKHPLVDFSIFKNRGYSGAT
                     ISNFLLNGVAGGALIVINMYYQQQLGFNSSQTGYISLTYLIAVLSMIRVGEKILSQHG
                     PKRPLLLGSGFTVIGLILLSLTFLPEMWYIVSSIVGYLLFGTGLGLYATPSTDTAVAS
                     APDDKSGVASGVYKMASSLGNAFGVAVSGTVYTVLAANLNLNLGGFTGMMFNALLAIV
                     AFLVILLLVPKNQTNL"
     gene            complement(5651..6346)
                     /locus_tag="O6Y56_001263"
     CDS             complement(5651..6346)
                     /locus_tag="O6Y56_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5574518.1"
                     /translation="MEGNLLQQLFNYYVTNFGYLWDLFFKHLLMSVYGVLFAALIGIP
                     LGILLARYTKLSGFVITIANIIQTVPVIAMLAILMLVMGLGSETVVLTVFLYALLPII
                     KNTYTGIASVDANIKDAGKGMGMTRNQVLRMIELPLSVSVIIGGIRIALVVAIGVVAV
                     GSFIGAPTLGDIVIRGTNATDGTTFILAGAIPIAIIAIVIDVLLRFLEKRLDPTTRHR
                     KNQSNHRPQSINM"
     gene            complement(6346..7287)
                     /locus_tag="O6Y56_001264"
     CDS             complement(6346..7287)
                     /locus_tag="O6Y56_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant ABC transporter substrate-binding
                     protein"
                     /protein_id="HDB5574519.1"
                     /translation="MKKIKYILVVLVLSLIVLSGCSLPGLGSKSTKNDVKITALSTSE
                     SQIISHMLRLLIEHDTHGKIKPTLVNNLGSSTIQHNALINGDANISGVRYNGTDLTGA
                     LKEAPIKDPKKAMIATQQGFKKKFDQTFFDSYGFANTYAFMVTKETAKKYHLETVSDL
                     AKHSKDLRLGMDSSWMNRKGDGYEGFKKEYGFDFGTVRPMQIGLVYDALNSEKLDVAL
                     GYSTDGRIAAYDLKVLKDDKQFFPPYAASAVATNELLRQHPELKTTINKLTGKISTSE
                     MQRLNYEADGKGKEPAVVAEEFLKKHHYFDKQKGGHK"
     gene            complement(7304..7939)
                     /locus_tag="O6Y56_001265"
     CDS             complement(7304..7939)
                     /locus_tag="O6Y56_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5574520.1"
                     /translation="MIEFLHEHGGQLMSKTLEHFYISIVALLLAIIVAVPIGILLSKT
                     KRTANIILTVAGVLQTIPTLAVLAIMIPIFGVGKTPAIVALFIYVLLPILNNTVLGVQ
                     NIDSNIKEAGKSMGMTQFQLMKDVELPLALPLILGGIRLSSVYVISWATLASYVGAGG
                     LGDFIFNGLNLYDPLMIVTATVLVTALALGVDALLALVEKWVVPKGLKVSG"
     gene            complement(7936..9162)
                     /locus_tag="O6Y56_001266"
     CDS             complement(7936..9162)
                     /locus_tag="O6Y56_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574521.1"
                     /translation="MLSIKHLTKIYSGNKKAVDDISLDIQSGEFIAFIGTSGSGKTTA
                     LRMINRMIEATEGQIEIDGKDVRSMNPVELRRNIGYVIQQIGLMPHMTSKENIVLVPK
                     LLKWTKEEKDKRAKELIKLVDLPESFLERYPAELSGGQQQRIGVVRALAAEQDIILMD
                     EPFGALDPITRDTLQDLVKTLQRKLGKTFIFVTHDMDEAIKLADKICIMSEGKVVQFD
                     TPDNILRHPANDFVRDFIGQNRLIQDRPNDKTVEGVMIKPITIQAEATLNDAVHIMRQ
                     KRVDTIFVVDSNNHLLGFLDIEDINQGIRGHKSLRDTMQQHIYTVQIDSKLQDSVRTI
                     LKRNVRNVPVVDDQQRLVGLITRANVVDIVYDTIWGDSEDTVQTEHVGEDTTSSKVHE
                     QHTTNVKVHDIGDDKS"
     gene            complement(9525..9608)
                     /locus_tag="O6Y56_001267"
     CDS             complement(9525..9608)
                     /locus_tag="O6Y56_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574522.1"
                     /translation="MGVCPSVTMDACALLQNFDFCNNISHF"
     gene            complement(9688..9798)
                     /locus_tag="O6Y56_001268"
     CDS             complement(9688..9798)
                     /locus_tag="O6Y56_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574523.1"
                     /translation="MQDDTKQPMAHAVGCFFRCACHRQHFDVGIPLQAWE"
     gene            complement(9833..10432)
                     /locus_tag="O6Y56_001269"
     CDS             complement(9833..10432)
                     /locus_tag="O6Y56_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI family protein"
                     /protein_id="HDB5574524.1"
                     /translation="MSEKQPNEQVEAFLNKESQWQEEYKYLRALIFNETELEEAYKWM
                     HPCYTLNNKNVVLIHGFKNYVALLFHKGAILEDKYHTLIQQTEKVQAARQLRFENLTE
                     IQARTEEIKYYLAEAIKAEKAGKKVEMKKTEEYVIPKELEAKFEEMPQLESSFYKLTP
                     GRQHQYIYHIGQAKRSETRQKRVEKYINQILEGKGMHDK"
     gene            10612..12249
                     /locus_tag="O6Y56_001270"
     CDS             10612..12249
                     /locus_tag="O6Y56_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HDB5574525.1"
                     /translation="MNKDKQLHNDKINLSQLVLLGLGSLIGSGWLFGAWEASSIAGPA
                     AIISWVLGFLVIGTIAYNYIEIGTMFPQSGGMSNYAQYTHGSLFGFIAAWANWVSLVT
                     IIPIEAVSAVQYMSSWPWHWAKPMKHLMENGSISTYGLLAVYLIIVIFSLLNYWSVKL
                     LTSFTSLISVFKLGVPMLTIIMLMLSGFDTSNYGHSASTFMPYGSAPIFAATTASGII
                     FSFNSFQTIINMGSEIKNPEKNIARGIAISLSISAVLYIILQSTFITSMPQSMLQHSG
                     WNGINFNSPFADLAILLGINWLAILLYIEAFVSPFGTGVSFVAVTGRVLRAMEKNGHI
                     PKFLGKMNEKYHIPRVAIIFNAIISMIMVTLFRDWGTLAAVISTATLVAYLTGPTTVI
                     ALRKMGPTMTRPFRAKILKVMAPLSFVLASLAIYWAMWPTTAEVILIIILGLPIYFFY
                     EYRMNWRNTKKQIGGSLWIIVYLIVLSILSFIGSKEFKGLNMIHYPFDFIVIIIVALI
                     FYYIGTTSSFESVYFRRATRINTKMRESLNNESKSSH"
     gene            12556..13908
                     /locus_tag="O6Y56_001271"
     CDS             12556..13908
                     /locus_tag="O6Y56_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase/lipase family protein"
                     /protein_id="HDB5574526.1"
                     /translation="MKINTTGGQIHGITQDGLDIFLGIPYAEPPVHDNRFKHSTLKTQ
                     WSEPIDATEIQPIPPQPDNKLEDFFSSQSTTFTEHEDCLYLNIWKQHNDQTKKPVIIY
                     FYGGSFENGHGTAELYQPAHLVQNNDIIVITCNYRLGALGYLDWSYFNKDFHSNNGLS
                     DQINVIKWVHQFIESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGAL
                     RLDTLESARNKAQHFQKMMLDYLDTDDVTSLSTDDILMLMAKLKQSRGPSKGLDLIYA
                     PIKTDYIQNNYPTTKPIFACYTKDEGDIYITSEQKKLSPQRFIDIMELNDIPLKYEDV
                     QTAKQQSLAITHCYFKQPMKQFLQQLNIQDSNAKLWLAEFAWHDTSSAHYRSAYHILD
                     MVFWFGNLQILAAHQYPTTAHLKFLSRQMQNDLANFAKSGKMPWPMYHNERRYYRSYQ
                     "
     gene            complement(13970..15157)
                     /locus_tag="O6Y56_001272"
     CDS             complement(13970..15157)
                     /locus_tag="O6Y56_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000026193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5574527.1"
                     /translation="MSIMRLFTFILSIFIVGMVEMMVAGIMNLMSQDLHVSEAVVGQL
                     VTMYALTFAICGPILVKLTNRFSSRPVLLWTLFIFIIGNGIIAVAPNFSILVVGRIIS
                     SAAAALIIVKVLAITAMLSAPKNRGKMIGLVYTGFSGANVFGVPIGTVIGDLVGWRYT
                     FLFLIIVSIIVGFLMMIYLPKDQEIQRGPVNHEAPSHENHVTSKILRPAEVAKYLIIT
                     FLVLIANSVTFVFINPLILSNGHDMSFVSLALLVNGIAGVIGTSLGGIFSDKITSKRW
                     LMISVSIFIVMMLLMNLILPGSGLLLAGLFIWNIMQWSTNPAVQSGVIQHVEGDTSQV
                     MSWNMSSLNAGIGVGGIIGGLVMTHVSVQAITYTSAIIGALGLIVVFTLKNNHYAKTF
                     KSS"
     gene            complement(15551..16327)
                     /gene="fetB"
                     /locus_tag="O6Y56_001273"
     CDS             complement(15551..16327)
                     /gene="fetB"
                     /locus_tag="O6Y56_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron export ABC transporter permease subunit
                     FetB"
                     /protein_id="HDB5574528.1"
                     /translation="MSNTALGLTALLLVIPIIISYKEGLHIIKDLIVATLRAVVQLII
                     LGFLLHYIFKINDKWLLVLCVFVIIVNASWNTISRSSPVMHHVFLISFVAIFVGTALP
                     LAGTIVTGAIQFTANEVIPIGGMLANNGLIAINLAYQNLDRTFVQDGTNIESKLSLAA
                     TPKLASKGAIRESIRLAIVPTIDSVKTYGLVSIPGMMTGLIIGGVPPLQAIKFQLLVV
                     FIHTTATIMSALIATYLSYGQFFNARHQLVARNTDVKSES"
     gene            complement(16320..16982)
                     /locus_tag="O6Y56_001274"
     CDS             complement(16320..16982)
                     /locus_tag="O6Y56_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDB5574529.1"
                     /translation="MLLEIKDLVYEASDRVILNHINLKVDKGETIAIIGPSGSGKSTF
                     QKLICNLISPTSGTLYFKGKPYDDYEPEILRRHISYLMQQSDLFGETIEDNMIFPSLA
                     RNDKFDKKRAKQLIKDVGLGHYQLSSKIEHMSGGERQRIAIARQLMYTPDILLLDEST
                     SALDINNKEKIENIIFKLADQGVAIMWITHSDDQSMRHFQKRITIVEGQISNTEELNQ
                     HE"
     gene            complement(17327..18403)
                     /locus_tag="O6Y56_001275"
     CDS             complement(17327..18403)
                     /locus_tag="O6Y56_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HDB5574530.1"
                     /translation="MNQSVKLLKHLTDVNGIAGYEMQVKEAMRNYIEPVSDQIIEDNL
                     GGIFGKKNAENGQYSIMISGHMDEVGFMVTKIDKHGFISFTPVGGWWNQVMLSQKVTI
                     TTDSGKEIRGIIGSKPPHVLTPEERKKPMEIKNMFIDIGVSSKEEAEEAGVEVGNMVT
                     PYSEFEVLANNKYLTAKAFDNRYGCALAVEVLKRLKDENIGINLYSGATVQEEVGLRG
                     AKVAANTIKPDLAIAVDVGIAYDTPGMSGQTSDSKLGGGPVVIMMDATSIAHQGLRKH
                     IKGVAKKHNIEVQWDTTPGGGTDAGSIHVANEGIPTMTIGVTLRYMHSNVSVLNVDDY
                     ENSIRLVTEIVRSLNDETYKNIMW"
     gene            18640..19095
                     /locus_tag="O6Y56_001276"
     CDS             18640..19095
                     /locus_tag="O6Y56_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehR family lipoprotein"
                     /protein_id="HDB5574531.1"
                     /translation="MKKLCSLIVVALVCIIALSACGKEQTKTYEGDVSGKHVLTSITY
                     KDDKVLKQSTINTIKYDDLGMDKDEAKKLFAKSESIFKDLKGVKYNVDYKDKKAIEHL
                     DIDYTEVDMKKLNKRLGVSTKENKDISFEKLEKQLKHRGLKEKDKMDDK"
     gene            complement(19263..20840)
                     /locus_tag="O6Y56_001277"
     CDS             complement(19263..20840)
                     /locus_tag="O6Y56_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding glutamate synthase family protein"
                     /protein_id="HDB5574532.1"
                     /translation="MTFLTVMQFIVNIIIIGFLLTVMVIGLIWLIKDKRQSQHSVLRN
                     YPLLARIRYISEKMGPELRQYLFSGDNEGKPFSRNDYKNIVLAGKYNSRMTSFGTTKD
                     YQDGFYIQNTMFPMQRNEISVDNTTLLSTFIYKIANERLFSREEYRVPTKIDPYYLSD
                     DHAIKLGEHLKHPFILKRIVGQSGMSYGALGKNAITALSKGLAKAGTWMNTGEGGLSE
                     YHLKGNGDIIFQIGPGLFGVRDKEGNFSEGLFKEVAQLSNVRAFELKLAQGAKTRGGH
                     MEAEKVNEEIAKIRNVEPYKTINSPNRYEFIHNAEDLIRFVDQLQQLGQKPVGFKIVV
                     SKVSEIETLVRTMVELDKYPSFITIDGGEGGTGATFQELQDGVGLPLFTALPIVSGML
                     EKYGIRDKVKLAASGKLVTPDKIAIALGLGADFVNIARGMMISVGCIMSQQCHMNTCP
                     VGVATTDAKKEKALIVGEKQYRVTNYVTSLHEGLFNIAAAVGVSSPTEITADHIVYRK
                     VDGELQTIHDYKLKLIS"
BASE COUNT         6940 a         4090 c         3042 g         6924 t
ORIGIN      
        1 aaaaggaacg tttatgacta ctaaaaaact gtattttcta tccatttcaa ttatcatttt
       61 agtcgccatt tcaattgcta tatatataac attaaatagc aatacgaaga cgcggttaac
      121 caatgattcg caacaacaaa tagatacaat tatcgagcat gatttacaaa agggacatat
      181 tcctggagca tcaattttaa tagtaaaaaa tggtaaagtt tttttaaata aaggttatgg
      241 ttatcaagat gttgataaaa aagtcaaagc ttctcccaca acaaagtatg aaattgcttc
      301 taatacgaaa gctttcacag gtcttgcaat tttaaaatta gctcaagaag gtcgattaaa
      361 cttaaatgat gccgtatcca aacatgtgcc tcattttaaa atgaactata atggtcaaaa
      421 tgaaactatt acgattaagc aacttttggc tcaaacaagt ggtataccta gtgatattac
      481 aagcgaagac gccgtaacaa ataaaaataa tcgtttaaat gatgtaaccc atgcaattat
      541 gggtgatgaa ttacatcata agcccggaga agaatttgaa tactcaaata tgaactatga
      601 tttattgggt ttaattatcc aaaacgttac gaagcaatcc tatacaaaat atattacaaa
      661 ttcatggctc aagcctttgc atatgaccca tacatcattc aaacaaacca ataacaaatc
      721 aaagcatgat gctattggct acgaattaca aggttcgaca cctgtcgtct ctaaacctga
      781 atttaacctt tgggatacac catcagcata tatgatgaca tcaactgaag atttggaaca
      841 ttggataaaa ttccaactta atccacctga taaatacaaa tcattagttc aacaatcaca
      901 taaaaattta tcatcaacaa ttggtgaacc taatgccaat gcatatgctt ccggctggtt
      961 taccaataat gatgaacatt tagtgtttca ttcaggaacg ctcgataact tttcatcatt
     1021 tattttacta aatccaaaac aaaattatgg aattgttgtg cttgcaaatc taaattcgga
     1081 atatgtaccc aaattagttg agcatcttaa cacacaaatt gtaaatcaca agcgatattc
     1141 gacagttgcg tctatgctca atcaatataa aaatcaattt aatattgtta ccgttttgat
     1201 gacaacactt attttattag catttatatt ctcagcttat cgtgcttggc aaatgcgtca
     1261 cgggaaaatc atcctgcgca aatcaaaact taccacattt ttaagttggc taactttatg
     1321 tttatttatc gctatagcac tcatattata tgcattacca tatctcattc tcggtagcaa
     1381 taactggtct tttgtactga cttggctgcc aatagaaatt aaattaacgt taactacaac
     1441 atttattgca ttattcagta tgttaattac aattctgtta gtactacata caacgacaat
     1501 taagaaacca taaaaaagac ttgttcaatc gcccatcaat ccgaaacata catatttatg
     1561 tatgaggatt agcgatttga acaagtcttc attattaaca tgctatatgc agaaatcgat
     1621 tatttaattg gattcatgcc atctttccaa gttttataaa tcagagtacc accttgcgct
     1681 ttaaacttct cattgcttac gccacgttca aatggttgcg caggttgaat atcaatattt
     1741 ggttcaacac caagttgttt tttataccat tctgcaaatt cagaaccttt aacaggcgca
     1801 tcatctgcta cattatagat accattttca aaatgaatag cttgaataga tgtttcaact
     1861 gcatcatcaa gatgcacaaa tgatgttacg ccatctgaaa gtgtcacttg accatccata
     1921 aattgattat aaatcatgcc atcttttccg taccaagtac ctgggccata taaccagcca
     1981 aaacgtaaaa caacgtattc atccatacga gccgtttctt cttctagacc aaccacacca
     2041 tcaaccgtta cttttctatc accagttgag ttaaaatcaa gtgaagtttc ctcatttgct
     2101 aatccttcgc ccggttcata cataaaggca atactttggg caattacttt cttaacatca
     2161 tgctttttcg ccgcatcaat taaattttta gaaccttcaa tacgtacttt cgtgtttgct
     2221 gccatatcaa cattttttaa atccgtaatt tggttgataa tgatttctgg tttaaaatct
     2281 gctaacgctt gatcaatggt atcagctttt aatatatcac caatatatgc ttttacatta
     2341 acagtagcta gcttttgttg accattctca gatgtagtaa aaccagcaac ctcatgcccc
     2401 tcttctttta gtctttgaac taatttaatg ccaataaggc ccgttgcacc agttacaaaa
     2461 attttactca ttatatacac cttttctcta tttgtctttt aatataatta cttgcttgat
     2521 gagtgtacaa aattcacgtg agacttccaa atgatttgcc tcaaaatttt tcaaagtgtc
     2581 gtcgtaaaaa ctgtctagca aatgctagta gtatgtcgta gacctatgac aaatctgaat
     2641 tatgacgaag accaatcaag aaaaacagca ccaagatcat ttcaatttga aagtacctta
     2701 ctgctgttct ttatttatta catttcaatt ttaataatga ccgtaattat cacgtgatag
     2761 tcatttcctt gtaatcatac ctaaaaacac taattaatcc tgtgcatgtc gctgactttc
     2821 tttagtatga attaaatcag taataaagcg attgactggc gcttcaatat gacgttgttt
     2881 acctaatgtt gcaactgcac cattaatata atcaatttca gtttttctat tattaacaat
     2941 taaatcttga tacatggatg gataatgcgc accaactttt tcatttaaat caactaaata
     3001 ttcaaatact tcatcaacat ttaaatgaac attatcaatc gtcgctacat gcactatttc
     3061 ttgcgttaat ttataaatca aacacttcgc ataactactt tcattcagtg atgccatatt
     3121 acactccaac actgtgctta atgcatttgc cgtaccatta acacaaatct ttttccaaat
     3181 cgattggtat aaatctttac taatgacacc attcaattcc gcttcgttaa gtaaatcagc
     3241 aacttttata acattttctt tacctccatc cactagttca cctatttcaa ctggtccact
     3301 accaagtaaa tgactgtgcc cagggctttc aagacctgcc gtccaagtcg taacacctct
     3361 gacaatttgt gattgagcaa catactgcgc aatgacttct tcatgcttca aaccattcat
     3421 cgtacatacg acaatcgttt cattatcaat atgtggcttc atagcttcca tcatttcttt
     3481 taattgcata gactttggaa atagaaagac aacatcgtaa atgcttccgt ccggttgatc
     3541 attaaaatgg tacatcggaa tgttcaactc gaatgcctct ccattaatcg ttatatttaa
     3601 tccatgttgc ttaaccgctt caacatgaga tgtatatccg tcaataagtg tgacatcata
     3661 tcctgcttga aatagtttgg caccaaagcc actacctaat gcacccgatc cagcaattgc
     3721 aattttcatc ctataaacct ctcttcatcg ttgttgttca ttttaaaaat actactttcg
     3781 catattagcg tcaatttgaa aatcattcgc ttaatataca cacacagctt ttatcgtcta
     3841 taaaagaaca cacctaacat taaacgtcaa tacgcaacat taagtgtgta tgatatactt
     3901 gctttcacaa aatttccttt aaaatctcta cataataact tgctttcatt tcagttttac
     3961 aaattcgttt gatttttagg aactaatagt aaaatgacta aaaatgcaac aattgctagc
     4021 aaggcattaa acatcatacc tgtgaaacca cctaagttca aatttaaatt agctgctaac
     4081 acagtataaa ccgtaccaga tactgctact ccaaatgcat ttcctaatga tgacgccatt
     4141 ttatatacgc ctgaagcaac acccgactta tcatctggcg cactagcaac tgctgtatca
     4201 gttgatggtg tagcatataa tcctaaacca gtaccaaata ataaatatcc aactatacta
     4261 gatacgatat accacatttc tggtaaaaat gttaacgaca ataagattaa cccaatcact
     4321 gtaaagccac ttcctagtaa tagtgggcgt ttcggaccat gttgagataa aatcttttca
     4381 cctacacgaa tcattgacaa cactgctatt aaatacgtta atgaaatata acccgtttgc
     4441 gaagaattaa atcctaattg ttgttgataa tacatgttaa tgacgataag tgcaccacct
     4501 gctacaccat ttaataagaa gtttgaaata gttgcaccac tgtatcctct atttttaaaa
     4561 attgaaaaat caacaagtgg atgctttatt ttattttcgt aatatacaaa accaactaat
     4621 gaacagataa acactacaat taaacctaga attaacggtg aaactaaacc aaaatgagac
     4681 gtctgtgtga tgattacatt taaacttaac attgtcacca ctaaaatgac taacccgata
     4741 acgtcaaact ttttagcttc tgctttcata cctttgattg gttctgcttt agtctcaggt
     4801 gcgtgtttga ttaagtacat tgctaataat gttaatagaa ttgaaacaac aaatattgaa
     4861 cgccaaccta tatatgtagc cattaagcca ccaaacaacg tacaaatacc actaccaccc
     4921 caagaaccaa tagaccaata gcttaaggca cgttgtcttc ttgtaccaat ataatattcg
     4981 ttaataatag caagtgtgga tggcataata catgctgcag acaaaccttg aattattcta
     5041 cctataatta aaaatgctgg caaaggtgta ataatgatga gtaatgaacc tacaacattt
     5101 aatatcaatc ctacataagt aattttgacg cgaccaaatt tatcagcaac atcaccagca
     5161 cctacgataa acaaaccagc aaataaggca gataagctaa cagcgatatt tatcgttcca
     5221 acgtcactac tatatgttga ttgtaatggg acaacaagat taacaagtga ctgcgcgaat
     5281 agccaaaagg taataacccc taaaacgata cccaaaagca atcggttgtc acctctaaat
     5341 tgttttgatg tgtccatgaa ttagataagc ctcctatgtt taagaaaaac aaatttttaa
     5401 tatgatatat taagaaacaa tatcataaat ttgcagaaaa ttataaataa aacatctcat
     5461 tttttagtat ttttacaata attaacgatt tttatccaaa aactttcatg ataataattg
     5521 ctattttagt gtaaacgcat acaaacataa cctataaaaa ggctactcaa agattatttg
     5581 agctccttga gtagcctcat tttttataaa tcatgaaacg gaatcgctaa attataaaca
     5641 tcttctacta ttacatatta atactttgcg gacgatgatt agattgattt ttacgatgtc
     5701 gtgtcgttgg gtctaatcgt ttttctaaaa atcttaatag tacatcaatg acgattgcaa
     5761 tgatagcaat cggaatcgca cctgctaaaa taaacgttgt gccatccgtc gcatttgtac
     5821 cacgaatcac aatgtcacca agcgtaggtg ctcctataaa tgatccaacg gcaacaacac
     5881 ctatcgcaac aaccaaggca atacgaatgc caccgataat aaccgaaaca gataacggta
     5941 attcaatcat tcgtagcact tgattgcgtg tcattcccat acctttgcca gcatccttaa
     6001 tattcgcatc aacactagct ataccagtat aagtgttttt tataattgga agtaacgcat
     6061 ataaaaacac tgttaaaact actgtttctg agcctaagcc catgactaac attaaaatag
     6121 ctaacattgc aatgactgga actgtttgaa ttatatttgc aattgtaatt acaaatccag
     6181 aaagttttgt gtatcttgca agcaagattc ccaatggaat accaattaaa gcagcaaaca
     6241 gcacaccata gacagacatt aataagtgtt tgaaaaataa atcccataga tagccaaagt
     6301 tcgtaacata ataattgaat aattgctgta ataaattacc ttccattact tatgaccacc
     6361 tttctgttta tcaaaatagt ggtgtttttt caaaaattct tctgcgacga cagcaggttc
     6421 tttaccttta ccatccgctt cataattcaa gcgctgcatc tctgaagttg aaatctttcc
     6481 agtcaactta ttaatcgtcg ttttaagttc tgggtgttga cgtaataatt catttgttgc
     6541 aacagcactc gcagcataag gtgggaaaaa ttgtttatca tctttaagta ctttcaaatc
     6601 atacgccgca attcgaccat ctgtagaata acctaatgca acgtctaact tctctgagtt
     6661 taatgcgtcg tagactagac ctatttgcat tggtctcact gtaccaaagt cgaaaccata
     6721 ctctttttta aacccttcat agccatcgcc tttacgattc atccatgaac tatccatacc
     6781 taaacgtaaa tctttactat gctttgctaa atctgaaact gtctctaaat gatatttttt
     6841 agcagtttcc ttcgttacca tgaatgcata cgtattcgca aaaccatacg aatcaaaaaa
     6901 cgtttgatca aatttctttt taaatccttg ttgtgtggct atcattgctt tcttagggtc
     6961 tttaattggt gcttccttca aagctcctgt taaatctgta ccattgtatc taacacccga
     7021 tatattagca tcgccattaa ttaaggcatt atgttgaatc gtacttgacc ctaaattatt
     7081 tactaatgtt ggctttatct taccatgtgt atcatgctct attaacaacc gtaacatatg
     7141 tgaaataatt tgcgattcgc ttgttgataa tgctgtaatt ttgacatcat ttttcgtgct
     7201 cttactacct agtccaggca aactacatcc agataatacg ataagcgata agacaagcac
     7261 gacaagtata tatttaattt tcttcattat cttagcctcc taattatcca gatactttta
     7321 agcctttggg aactacccat ttttcaacta aagctaataa ggcatcaaca cctaatgcta
     7381 gtgcagtaac gagtaccgtt gcagttacaa tcatcagtgg atcatataaa tttaatccat
     7441 tgaaaatgaa atcacctaat ccacccgcac ctacataact tgcaagtgta gcccaactaa
     7501 ttacatacac agacgacaag cgaataccgc ctagtataag cggtaaggct aatggcaatt
     7561 ccacatcctt catcaattga aattgcgtca tccccatact ttttccagct tctttaatgt
     7621 tgctatcaat attttgaaca ccgagtaccg tgttatttaa aataggtaat aatacataaa
     7681 taaatagcgc tacaattgca ggcgttttac caacaccaaa aatcggtatc ataatagcaa
     7741 gtacagctag tgttggaata gtttgtaaga cacctgctac agtcaatata atattggcag
     7801 ttcgctttgt ttttgataat aaaatgccta taggtactgc aacaatgatg gcaagtaata
     7861 atgccactat agaaatatag aaatgttcca gtgttttcga catcaactgt ccaccatgtt
     7921 catgtaggaa ctcaatcatg atttatcatc tcctatgtca tgtactttga cattagtagt
     7981 atgttgctca tgcacttttg aggacgtagt gtcttccccc acatgttctg tttgcactgt
     8041 atcctcacta tcgccccaaa ttgtatcata tacaatatca acaacattgg cacgcgtaat
     8101 cagtcctact aaacgctgtt gatcatctac gacaggtaca ttcctaacgt ttctttttaa
     8161 aatcgtacgt acagaatctt gtaacttaga atcaatttga acggtataaa tatgttgttg
     8221 cattgtatct cgtaaacttt tgtgtccacg tataccctga tttatatctt caatgtctaa
     8281 gaagcctagt aaatggttat tactatctac tacaaaaata gtatcaacac gtttttgtct
     8341 cataatatga acggcgtcat tcagtgttgc ttctgcttgt atcgtgattg gtttaatcat
     8401 tacaccttct acagtcttgt cattgggacg gtcttgaatc agtctatttt gtcctataaa
     8461 atcacgtaca aaatcatttg cgggatgtct taaaatattg tctggtgtat caaattgcac
     8521 caccttacct tctgacataa tacaaatttt gtctgctaat ttaatcgctt catccatatc
     8581 atgtgttaca aagataaacg tcttgcctaa ttttcgttgt aacgttttaa ctaaatcttg
     8641 taacgtatct ctcgtaatag gatccaatgc accaaaaggt tcatccatta aaataatatc
     8701 ttgttcggcc gcaagtgctc ttacgacacc gatacgttgt tgttgcccac ctgatagttc
     8761 tgctggataa cgttctaaaa atgactccgg taaatccaca agtttaatta attcctttgc
     8821 acgtttatcc ttttcttctt tagtccattt caacaattta ggtaccaaca caatattctc
     8881 tttactcgtc atatgaggca ttaagccaat ttgttgaata acatagccaa tatttctacg
     8941 taattcgaca ggattcatac tccgaacgtc tttaccatca atttcaattt gtccttctgt
     9001 cgcttcaatc atacggttta tcattcttaa agcagtcgtt ttgccacttc cactggttcc
     9061 aataaatgcg ataaattccc cagattgaat atctaaagag atgtcatcta ctgccttttt
     9121 attaccagaa taaattttcg ttaaatgctt aatacttaac ataatcattt ctccttcctc
     9181 ataaaaaata tgacgaatga tacgcataaa ataaaaagac catcatcgca attgttaaac
     9241 aaatagagtc ataagttaaa caagtacaca tcatggtctt gattatgtag aattttatat
     9301 ttttcatctg taatgtgaat acctaacagt aaacggcgct atgtatgttg aatttctacc
     9361 gattactttg tttgcacatt cgtatattcg acatttaaaa ctaacatact ctatatgatg
     9421 ttattaaaca ttattatttt atcttttgca actaaataga taactcatat tttttaaaag
     9481 cgaatttatt atcgctcaat tggttgtttt atagcaaaaa agtgtcaaaa atgtgaaata
     9541 ttattgcaaa agtcgaagtt ttgtaataat gcacacgcat ccattgttac agacggacaa
     9601 acgcccatcc gccactcaca aagtcatcct tatattttaa tatcttcatc attcattgta
     9661 gaaatccttg ccttttgcta acagttccta ctcccaagcc tgtaacggaa ttccaacgtc
     9721 aaagtgttgc ctatgacagg cacacctaaa aaaacaacca acagcatgag ccattggttg
     9781 tttcgtgtca tcttgtatgt tgttgtataa ccggtatgct tttactcatt aattacttat
     9841 catgcatccc tttaccttct agtatttggt taatatactt ttcaacacgc ttttgtcttg
     9901 tttcactgcg tttagcttgc ccaatatgat atatatattg atgttgtctg cctggcgtta
     9961 atttataaaa tgacgactct aactgtggca tttcttcgaa cttagcttct aactctttag
    10021 gaataacata ttcctctgtt ttcttcattt caactttttt accagctttt tcagctttaa
    10081 ttgcttcagc tagataatat ttaatttctt cggtacgtgc ttgaatctct gttaaatttt
    10141 caaatcgtaa ctgacgagct gcttgcacct tttcagtctg ttgaatgagt gtatgatatt
    10201 tatcctccaa aatggcacct ttatgaaata atagtgcaac ataatttttg aagccatgga
    10261 taagtactac atttttatta ttcaacgtgt aacaaggatg catccattta tacgcttcct
    10321 ctaattctgt ttcattaaag attaacgctc tcaaatattt atattcttct tgccattgac
    10381 tctctttatt taaaaatgcc tcaacttgtt cattcggttg tttctcactc atagtcatca
    10441 cttccatttt atttttcaat acacattgta ttatatatcc taattttata aaaaactaat
    10501 tttacaaatg cttttgcatt attacaaaaa atgaatttga ctattattat aataagcgta
    10561 taattgtcgc atattatttt ttgtattttt ggcaataacg aaggagtatt tatgaataaa
    10621 gacaagcaat tgcacaacga caaaatcaat ctatcccaat tagtcttatt agggttaggt
    10681 tctttaatag gatctggttg gctatttggt gcgtgggaag catcatcaat agctggacca
    10741 gcagcaatca tatcatgggt tcttggattc ctagtcattg gaaccattgc ctataactac
    10801 attgaaatcg gcacaatgtt tcctcaatca ggtggcatga gtaactatgc ccagtataca
    10861 catggctcat tatttggctt tattgctgct tgggcgaact gggtgtcttt ggtgacaata
    10921 atacctatcg aagctgtgtc agctgttcaa tatatgagtt cttggccgtg gcattgggcg
    10981 aaaccaatga aacatttaat ggaaaatggc tctattagca catatggatt gctagctgta
    11041 tatctcatca ttgttatttt ttcattatta aactattggt ccgtaaaact tttaacatca
    11101 tttacgagtt taatttctgt atttaaatta ggcgtaccca tgttaaccat catcatgttg
    11161 atgttatcag gattcgacac ttcaaattac ggccattcgg caagcacatt tatgccttac
    11221 ggaagtgcac cgatttttgc tgcaacaaca gcatcaggga ttattttttc attcaattca
    11281 ttccagacaa ttattaatat gggttcagaa attaaaaatc ctgaaaaaaa tatcgcaaga
    11341 ggcatcgcta tctcactgtc aatcagtgca gtgttgtaca tcattttaca aagtacgttt
    11401 atcacttcta tgcctcaatc aatgttacaa catagtggat ggaatggcat caacttcaat
    11461 tcaccatttg ctgatttagc tatcttatta ggaattaatt ggctcgcaat tttactatat
    11521 attgaagctt ttgtatcacc attcggtact ggcgtgtcat ttgtcgccgt tacaggtcga
    11581 gttttacgag caatggagaa aaatggacat atccctaaat ttcttgggaa gatgaatgaa
    11641 aaatatcata ttccacgtgt agcaattatc tttaatgcca tcattagtat gattatggtt
    11701 acgttattta gagattgggg tacgctagca gcagttattt ctactgcaac tttagtagcc
    11761 tatttaactg gcccaacgac agtgattgca ttaagaaaaa tgggaccaac aatgactcgt
    11821 ccatttagag caaaaatttt aaaagtaatg gcaccattat catttgtatt agcttcatta
    11881 gctatatatt gggcaatgtg gccaacaacg gctgaagtta ttttaatcat tatacttgga
    11941 ttaccaatct acttcttcta tgaatatcgt atgaattggc gtaatacaaa gaaacaaatt
    12001 ggtggtagct tatggattat tgtatattta atcgtgctat caatactgtc atttatagga
    12061 agcaaagaat ttaaaggctt aaatatgatt cactatccat ttgactttat agttattatt
    12121 attgtggcgc ttatcttcta ttacatcggt acaacgagtt catttgaaag cgtctatttc
    12181 cgtcgcgcaa cacgaatcaa tacgaagatg cgtgagtcac taaataatga atcaaagtca
    12241 tctcattaaa tattttaaaa tgcagtgcca tatatgattt caacacacac attaaccaac
    12301 cattgatttc aacatcttgg ttggtttttt attttgaaaa tgggttataa ataactaaca
    12361 taacaagatg gtgagagtga tattgtaatg aaatgtcact gtagaagaac atcatataat
    12421 gctgaaaatg gtttgagtta aaacagatat caagctcgtc tgattcagtc acaaaattgt
    12481 cttgttatac ttgtcaccta tcatctatag accgtggtat gattaaattg gggatgataa
    12541 aggaggttaa taaatatgaa gattaatact acaggtggtc aaattcatgg tattacacaa
    12601 gatggtttag atatcttctt aggcattcct tatgcagaac caccagttca tgacaatcgc
    12661 tttaaacatt ctacgttaaa aacacaatgg tcagagccaa ttgatgcaac tgaaatacaa
    12721 cccatcccac cgcaaccaga caacaaatta gaagattttt tctcctcaca atctacaact
    12781 tttactgaac atgaagactg tttatatcta aatatttgga aacaacataa tgatcagacg
    12841 aagaaacctg tcatcattta tttttatggt ggtagttttg aaaatggtca tggtacagcc
    12901 gaactctatc aaccagcaca tttagtacaa aataacgaca ttatcgttat tacatgcaat
    12961 tatcgtttag gcgcattagg atatttagac tggtcatatt ttaataaaga ttttcattcc
    13021 aataatggac tttcagatca aatcaatgtc ataaaatggg tgcatcaatt tattgaatcc
    13081 ttcggtggcg acgctaataa cattacttta atgggtcagt ctgcaggcag tatgagcatt
    13141 ttgactttac ttaaaatacc tgacattgag ccatacttcc ataaagtcgt tctgctaagt
    13201 ggcgcactac gattagacac ccttgagagt gcacgcaata aagcacaaca tttccaaaaa
    13261 atgatgctcg attatttaga tacagatgat gttacatcat tatcgacaga tgatattctt
    13321 atgctgatgg cgaagctaaa acaatctcga ggaccttcta aagggcttga tttaatatat
    13381 gcgcctatta aaacagatta tatacaaaat aattatccaa caacgaaacc aatttttgca
    13441 tgttatacaa aagatgaagg cgatatttat attactagtg aacagaaaaa attatcgccg
    13501 caacgcttta tcgacattat ggaattaaat gatattcctt taaaatacga agatgttcag
    13561 acggcgaagc aacaatcttt agcgattaca cattgttatt tcaaacagcc gatgaagcaa
    13621 tttttacaac aactcaatat acaagattca aacgcaaaac tatggcttgc tgaatttgca
    13681 tggcatgata cttctagcgc acactatcgc agtgcttacc atattctaga tatggtattt
    13741 tggttcggaa acttacaaat attagcagca catcaatatc caacaactgc tcaccttaaa
    13801 tttttaagtc gacaaatgca aaatgattta gctaattttg ctaaaagcgg taaaatgcct
    13861 tggccgatgt atcataatga acgtcgctat tatcgctcat atcaataacg ttatagcatc
    13921 taaaaaagca cacctgaatt tgatagcagg cgtgcttttc atatgagaat tatgatgatt
    13981 taaatgtttt agcataatga ttatttttca atgtgaaaac aacgattaat cctaatgcgc
    14041 caatgatggc actcgtatac gtgatagctt gaacagaaac atgtgtcatg accaagcctc
    14101 caataatgcc tccaacacca ataccagcgt ttaaactaga catgttccaa ctcattactt
    14161 ggcttgtgtc gccttcaaca tgttgaatca caccgctttg cactgctgga ttagtactcc
    14221 attgcatgat attccaaata aatagtcctg ctaacaatag acctgaacca ggtaaaatta
    14281 aattcataag taacatcatg acgataaaaa tagaaacaga aatcattaac caacgcttac
    14341 ttgtaatttt atcggagaat ataccaccta atgatgttcc aataacgcca gcgattccat
    14401 ttactagaag tgctaatgaa acgaatgaca tatcatgacc attagataaa ataagtggat
    14461 ttataaagac gaatgtcact gagtttgcaa tcaatactaa aaacgtaata attaaatatt
    14521 ttgctacttc agcaggtctt aatattttcg aagtaacatg attttcatga gaaggtgcct
    14581 catgattcac agggcctcgt tgtatttcct gatccttcgg taaatagatc atcatcaaga
    14641 agccaacaat aatactcaca ataattaaga atagaaatgt atagcgccaa cctactaaat
    14701 cgccgataac cgttccaatt ggtacaccaa aaacattggc accactaaac cctgtataga
    14761 caagtccaat cattttgcca cgatttttag gtgctgataa catcgctgta atagctaata
    14821 cttttacgat aattagtgct gctgctgcag atgagataat tctaccaact actaatattg
    14881 aaaaatttgg cgctacagca ataatgccat taccaatgat aaatataaat aatgtccata
    14941 ataatacagg ccttgatgaa aaacggttcg ttaatttaac cagaataggt ccacatatcg
    15001 caaatgttaa agcgtacatt gtcactaatt gaccaacgac agcttctgat acatgtaagt
    15061 cctgactcat caagttcata attcctgcaa ccatcatttc aaccattcct acgataaaaa
    15121 tacttaaaat gaatgtaaat agtcgcatga ttgacatttt aaaactcctt tcaacaaaat
    15181 ttccgatatt catttccctt agaataacga tttattaaaa atgtgtgcaa cacaatttta
    15241 tatataaacg ttctattata taatattttg ctttaatttt ctgtgcttaa ttggaaaatt
    15301 attgaaattg tttttcagta tttgaaaaat taacacaagt atgtcattta ataattatgt
    15361 ataattactt cagtttcaac aatgactcca aaaaagcacg cacgctttat atgtcagaac
    15421 agataactga ctacaaagta tgcgtgcctt tatgaatatt ttcgctgcgc taaataatag
    15481 cattactata tgtgtgcatc acttcatttc caattaaaac taatgcctaa atctgatgcg
    15541 gtaaaatcta tcatgactca ctcttaacat ccgtatttcg tgctactaat tgatgtcttg
    15601 cattgaaaaa ttgaccatag cttaaatatg tcgcaatcaa agcagacata atggtcgcag
    15661 ttgtatgaat aaacacgact aacaattgaa atttaatcgc ttgtaaaggt ggtacgccac
    15721 caataattaa gcctgtcatc ataccaggaa tcgacacaag cccatatgtt ttaactgaat
    15781 caattgttgg cactatagct aaacgaatac tttcacgtat tgcaccttta gaagccaatt
    15841 taggtgtagc tgcaagtgat aatttagatt caatattagt accatcttgt acgaatgtac
    15901 gatctaaatt ttggtaagct aaattaattg caatcaagcc attattagca agcatgccgc
    15961 cgataggtat aacttcattg gctgtaaatt ggatggcccc tgtcacaata gtacctgcaa
    16021 gcggtaatgc cgttccaaca aagatagcaa caaaggaaat caaaaagaca tggtgcatga
    16081 ctggtgatga tcgactaatc gtattccatg atgcgttgac aataatgaca aatacacata
    16141 atactaatag ccatttgtca ttaattttaa aaatatagtg cagtaagaat cctaaaatga
    16201 ttaattgtac gaccgcacgt agtgtcgcca caatcaaatc tttaataata tgtagacctt
    16261 ctttataaga aatgatgatt ggaataacta atagcaatgc cgtcagtcct aatgccgtat
    16321 tactcatgtt ggttcaactc ctctgtatta gaaatttgac cttcaacaat ggttatacgc
    16381 ttttgaaagt gtcgcatact ttggtcatcg ctgtgggtaa tccacataat tgccacgcct
    16441 tgatctgcta atttaaaaat gatattttct attttttctt tattattaat atctaacgca
    16501 cttgttgatt catctaatag aaggatgtct ggggtataca ttaattggcg tgcaatcgcg
    16561 atcctttgac gctcgccacc tgacatatgt tctattttag aacttagctg atagtgtcct
    16621 aaacctacat ctttaatcaa ttgcttggca cgcttcttat caaatttatc attacgtgca
    16681 agagacggaa aaatcatatt atcttcaatc gtttcaccaa acaaatcgct ttgttgcatc
    16741 aaatagctaa tgtgacggcg taatatttct ggttcgtaat catcatatgg tttaccttta
    16801 aagtaaagcg ttccactggt tgggctaatt aaattacata ttaatttttg aaatgtactt
    16861 ttaccactac ctgaaggacc aataatcgca atggtttcac ctttatctac ttttaaatta
    16921 atatggttta gtatgactct atcacttgcc tcatacacta aatcttttat ctctaacaac
    16981 atatttcccc ctcctcgtat catgagttat ttcgatataa tagggtattc cttttcttga
    17041 atagtgtgct tacctataag tcgacctagt caatgcttat taccccttaa aatcgctcta
    17101 ataagccata tcaaatatag tattcccatt tttgaaaaat ttagtgccat ttcattccgg
    17161 aaaatttttt taatatttat gtcaaaattg aagtacactg cagtgactta ttctcacttt
    17221 ttgaaaataa aaagccttta acatgacatc tcatgctaac taagaatcta gcttagttct
    17281 tgcatgacat catattaaag actttcttta ttatttatgg atttgactac cacattatat
    17341 ttttataagt ttcatcattc aatgaacgga caatttcagt aacaagacgg atagaatttt
    17401 cataatcatc cacattgagt accgatacat tagagtgcat gtatcgtaac gtgacaccta
    17461 ttgtcatcgt tggaatacct tcatttgcga catgaatact tcccgcatct gtacctccac
    17521 ctggtgtcgt atcccattgt acttcgatgt tatgtttctt agctacacct ttaatatgct
    17581 tgcgcaaacc ttggtgcgca atacttgtag catccatcat aataacaact ggaccaccgc
    17641 ctagtttact atcgctcgtt tgacctgaca tacctggggt atcataagca atacccacat
    17701 cgacggctat cgccaaatct ggtttaattg tattcgctgc cactttcgca ccacgtaacc
    17761 caacttcttc ttgcactgtg gcaccactgt ataagttaat gccaatattt tcatctttta
    17821 aacgttttaa tacctcaaca gctaatgcac agccatagcg attatcaaat gctttcgcag
    17881 ttaaatattt attatttgca agcacttcaa attcactata tggcgtaacc atattgccta
    17941 cttcaacgcc agcttcttca gcttcttcct tgctactaac accaatatct ataaacatat
    18001 ttttgatttc catcggcttt ttacgttctt caggcgttaa gacatgcggc ggtttagaac
    18061 cgatgatacc tctaatttct ttgcctgaat ctgttgtaat cgttactttt tgagatagca
    18121 tgacttgatt ccaccatcca ccaactggcg taaatgaaat aaaaccatgt ttatcaatct
    18181 ttgttaccat aaaaccaact tcatccatat gaccagaaat cataattgag tattgaccat
    18241 tctcagcatt tttctttcca aaaatgccac ccaagttatc ttcaataatt tgatcactga
    18301 caggctctat atagttacgc attgcttctt taacttgcat ttcataacca gcaatgccgt
    18361 ttacatctgt taaatgttta agtaatttga ctgactgatt catgttattc atcctcctgt
    18421 atttcaactt aaaactattg tatcactaac tttcagaaaa acgttcccta ccgctttatc
    18481 gttttcatgc ttaaatattt ttaacttttt gtgagaagta cacttaaaaa acctcatatc
    18541 ttcaaaaaaa tgacaaaatt taaatttttg aataacatca ttttttagta aatgttataa
    18601 tttctttata atacaaatat cgaaagaagg cgactgactt tgaaaaaatt atgttcatta
    18661 attgtagtag cattagtttg tatcattgca ttatcagctt gtggtaaaga acaaaccaaa
    18721 acatatgaag gtgatgttag tggtaaacat gtactaactt ctatcacata taaagatgat
    18781 aaagttttaa aacagtctac aatcaacaca attaaatatg acgatctagg tatggataaa
    18841 gacgaagcca aaaagttatt cgccaaatct gaaagtattt tcaaagacct taaaggcgta
    18901 aaatacaatg tagactataa agataaaaaa gcaattgaac acttagacat agattacaca
    18961 gaagttgaca tgaaaaaatt aaataaacgt cttggtgttt caactaaaga aaataaagat
    19021 attagttttg aaaaacttga aaagcaatta aagcacagag gcttaaaaga aaaagataaa
    19081 atggacgaca aatagtttat aacataaaaa tgccctcaga taagactaag gttacaaacc
    19141 ttaattcata ttctgagggc tttaatattt gaaattcttg tgtgaccaac atccactact
    19201 aatataaaat tatttgcagt aacgctaaaa tccgctgctt tcattttccc gaaataaata
    19261 agttaactaa tgagttttaa tttataatca tgtatcgttt gcaattcacc atcgactttt
    19321 cgatatacaa tatgatcagc agtaatttct gtaggactgg atacgccaac agctgctgca
    19381 atattgaata agccttcatg caaacttgtt acatagtttg tgacacgata ttgcttttct
    19441 ccaacaatca atgctttttc ttttttcgca tctgtcgttg caacacctac aggacatgta
    19501 ttcatatgac attgttgact cataatacaa ccgacactaa tcatcatgcc acgtgcaata
    19561 ttaacaaaat ctgcacctaa acctagtgca atcgcaattt tatctggtgt cactaactta
    19621 ccagatgccg ccaatttcac tttatctcga ataccatatt tttctaacat gccagacaca
    19681 ataggtagag ctgtaaatag cggtaatcca acaccatctt gtaattcttg gaatgttgca
    19741 ccagtaccac cttcaccacc atcaatcgta ataaagcttg gatacttatc taattccacc
    19801 atcgtacgta caagtgtttc aatttctgaa actttgctta ctacaatttt gaatcctact
    19861 ggtttttgac ctaattgctg caactgatcg acgaaacgaa tcaaatcttc agcattatga
    19921 ataaattcgt aacggttagg tgaattgatt gttttataag gttcaacatt tcggatttta
    19981 gcaatttctt cgtttacctt ttcagcttcc atatgaccac cacgagtctt agcaccttgt
    20041 gccaacttca gctcaaatgc acgtacgtta gataactgtg cgacctcttt aaataaacct
    20101 tcactaaaat taccttcctt atcacgaaca ccaaataaac cgggaccaat ttggaaaatg
    20161 atatccccat taccttttaa atgatattct gataagccac cttcacctgt attcatccaa
    20221 gtgcccgctt tagctagacc tttagataaa gctgtaatgg cattttttcc taatgctcca
    20281 taactcatac cagattgccc tacgatacgt tttaaaataa acggatgttt taaatgttca
    20341 cctaatttta ttgcatgatc atcacttaag taatacggat caatctttgt cggtacacga
    20401 tattcttcac gactaaataa acgctcattc gcgattttat aaatgaatgt tgataacaat
    20461 gttgtattat ctactgaaat ctcattacgt tgcatcggaa acattgtgtt ctgtatgtaa
    20521 aagccgtctt gataatcttt agtagtaccg aagctggtca tacgagagtt atattttcca
    20581 gccaaaacga tatttttata atcattacgt gaaaaaggtt tcccttcatt atccccagaa
    20641 aataaatact gacgtaattc cggtcccatt ttttctgaaa tatatctaat acgtgctagt
    20701 aaaggataat tccttaatac actatgttgt gattgtcttt tatctttaat taaccaaata
    20761 agcccgataa ccatgaccgt aagtaggaag cctataatga taatattaac tataaattgc
    20821 atgactgtaa gaaacgtcat tacaatccct cccccaaaat ttcaattcaa tatttatgat
    20881 acaccttaca aaataaaaca caatggaagc gcttcatttt ataaaacaat tttatgatat
    20941 gtttttcatt ttaaatttta atgtataaaa catacaatac aaagtaatat gtgcta
//
LOCUS       DALMNS010000040        20923 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.040, whole genome shotgun sequence.
ACCESSION   DALMNS010000040 DALMNS010000000
VERSION     DALMNS010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20923
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.040"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            135..941
                     /locus_tag="O6Y56_001278"
     CDS             135..941
                     /locus_tag="O6Y56_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDB5574533.1"
                     /translation="MAFHDKTATQVTNIELNVRDLDLMTTFYKNILGLSVKSSDDNTT
                     VLSVGTGGHTLTLHLLEDGRQTSPREAGLFHIAFLLPTTEDLANFLYFVAQKNMGIGA
                     GDHLVSEALYFNDPEGNGIEVYSDRPSSSWEWQNGKVKMDTLEVDSQTLLTHRTDEGW
                     QGMPAKGMIGHLHLKTHDLDAAYHCYIEQLGFQHVSDFPRALFMSTNHYHHHIAANTW
                     QSNQARQNNAQSYGLTHVDIYQPDASTHTFTAPEGFDITVHSNTDLVPEK"
     gene            complement(1073..1732)
                     /locus_tag="O6Y56_001279"
     CDS             complement(1073..1732)
                     /locus_tag="O6Y56_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDB5574534.1"
                     /translation="MSNMNQTIMDAFHFRHATKQFDPQKKVSKEDFETILESGRLSPS
                     SLGLEPWKFVVIQDQALRDELKAHSWGAAKQLDTASHFVLIFARKNVTSRSPYVQHML
                     RDIKKYEAQTIPAVEQKFDAFQADFHISDNDQALYDWSSKQTYIALGNMMTTAALLGI
                     DSCPMEGFSLDTVTDILANKGILDTEQFGLSVMVAFGYRQQDPPKNKTRQAYEDVIEW
                     V"
     gene            2002..2994
                     /locus_tag="O6Y56_001280"
     CDS             2002..2994
                     /locus_tag="O6Y56_001280"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000161541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HDB5574535.1"
                     /translation="MTKIMFFGTRDYEKEMALNWGKKNNVEVTTSKELLSSATVDQLK
                     DYDGVTTMQFGKLENDVYPKLESYGIKQIAQRTAGFDMYDLDLAKKHNIVISNVPSYS
                     PETIAEYSVSIALQLVRRFPDIERRVQAHDFTWQAEIMSKPVKNMTVAIIGTGRIGAA
                     TAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKESYHLFDK
                     AMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEAAYFTNDWTNKD
                     IDDKTLLELIEHERILVTPHIAFFSDEAVQNLVEGGLNAALSVINTGTCETRLN"
     gene            complement(3242..4042)
                     /locus_tag="O6Y56_001281"
     CDS             complement(3242..4042)
                     /locus_tag="O6Y56_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDB5574536.1"
                     /translation="MVKAIAVDMDGTFLDSKKTYDKSRFETIFTELRNRDITFIAASG
                     NQYAKLKSIFGDRDMYFISENGAVIYKGNELYNYKSFNRQVFQQVVDYLNMNQGIDQL
                     VICGLKSAYILKHTSEAFKEDTRFYYHQLKEIDSLQQLPEDDYVKIAFNINRETHPNV
                     DEEVATQFSNDIKLVSSGHDSIDIIMPNMTKGQALKRLLDKWEMSPSELMAFGDANND
                     KDMLAFAKHSYVMENSHDEELFNIASAVAPSNDKQGVLTIIEQEVLKK"
     gene            4363..4998
                     /locus_tag="O6Y56_001282"
     CDS             4363..4998
                     /locus_tag="O6Y56_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDB5574537.1"
                     /translation="MKLNNYSLKVKNKQLVDNCDLNFYLGQINHIVGKNGVGKSLLAK
                     DFLLNNSGNIPKSISQNVTLISSSSNIPNDITKDFLLSLLKSKFENNRQTFDKIYNIL
                     NIEAIPSNVLLKNLSDGQKQKLKLLSFLLEDHDLIILDEITNALDKKTVNEIYEFLND
                     FIQSHQTKTIINITHNLSDLSALPGKYFIFKDLQIEEYQSKEEVINDYINL"
     gene            5004..5735
                     /locus_tag="O6Y56_001283"
     CDS             5004..5735
                     /locus_tag="O6Y56_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease"
                     /protein_id="HDB5574538.1"
                     /translation="MSTLKLEFKKSISNKIIYTLGVLFIFLFLLGYFLPIGIDKVKNL
                     SYGQFFFSSYTVATQLGFLLFSFVFAYFINKEYSNKNILFYKLIGDNIFTFFYKKVAV
                     LFFECLVFIILSITIISIIYSNFSHYLLLIILFSLVILQYILVVGTISMVSPNILISL
                     GISIVYWIGSVILVAINKNIFGIVAPFEASNTMYRAVEKILNNESTFMCPTEIINTVS
                     FFVLLLIVNTIVLLLSRKRWLKIGM"
     gene            complement(5896..6516)
                     /gene="srtA"
                     /locus_tag="O6Y56_001284"
     CDS             complement(5896..6516)
                     /gene="srtA"
                     /locus_tag="O6Y56_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A sortase SrtA"
                     /protein_id="HDB5574539.1"
                     /translation="MKKWTNRLMTIAGVVLILVAAYLFAKPHIDNYLHDKDKDEKIEQ
                     YDENVKEQASKDKKQQAKPQIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVS
                     FAEENESLDDQNISIAGHTFIDRPNYQFTNLKAAKKGSMVYFKVGNETRKYKMTSIRD
                     VKPTDVEVLDEQKGKDKQLTLITCDDYNEKTGVWETRKIFVATEVK"
     gene            6710..7201
                     /locus_tag="O6Y56_001285"
     CDS             6710..7201
                     /locus_tag="O6Y56_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDB5574540.1"
                     /translation="MIRCAKKEDLNAILAIYNDAIINTTAVYTYEPQTIDERVAWFET
                     KQRKHEPVFVFEENGSVLGFATFGSFRPWPAYLYTIEHSIYVDASARGKGIASQLLHH
                     LIVEAKAKGYRALVAGIDASNKASIQLHQKFAFKHAGTLTNVGFKFNRWLDLAFYELD
                     LQD"
     gene            complement(7350..7520)
                     /locus_tag="O6Y56_001286"
     CDS             complement(7350..7520)
                     /locus_tag="O6Y56_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574541.1"
                     /translation="MLRLSIIFIAFIINTTITYGYTTEGTWVNLLFKSLSLSMIIVFM
                     FYYIRFVIEKKR"
     gene            complement(7582..7680)
                     /locus_tag="O6Y56_001287"
     CDS             complement(7582..7680)
                     /locus_tag="O6Y56_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574542.1"
                     /translation="MIKKKHLSGSFVPDRCFLIIFHKVEKFMGNAC"
     gene            complement(7699..8598)
                     /gene="sdaAA"
                     /locus_tag="O6Y56_001288"
     CDS             complement(7699..8598)
                     /gene="sdaAA"
                     /locus_tag="O6Y56_001288"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="HDB5574543.1"
                     /translation="MFDSIRETIDYAVENNMSFADIMVKEEMELSGKSRDEVRAQMKQ
                     NLDVMRDAVIKGTTGDGVESVTGYTGHDAAKLRDYNETHHALSGYEMIDAVKGAIATN
                     EVNAAMGIICATPTAGSSGTIPGALFKLEKTHDLTEEQMIDFLFTSALFGRVVANNAS
                     VAGATGGCQAEVGSASAMAAAAAVAIFGGSPEASGHAMALAISNLLGLVCDPVAGLVE
                     IPCVMRNAIGSGNALISADLALAGIESRIPVDEVIEAMDKVGRNLPASLRETGLGGLA
                     GTPTGEAIKRKIFGTAEDMVKNN"
     gene            complement(8612..9292)
                     /gene="sdaAB"
                     /locus_tag="O6Y56_001289"
     CDS             complement(8612..9292)
                     /gene="sdaAB"
                     /locus_tag="O6Y56_001289"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent
                     subunit beta"
                     /protein_id="HDB5574544.1"
                     /translation="MAKSYDYQSAFDIIGPVMMGPSSSHTAGAVKIGNSARAILGDIP
                     KNIEIHYYESFAQTHQGHGTDVAIVGGAMGYSTFDNRIKSSLEIAADDGIKIDIIEEE
                     GDSIGQHPNCAYIKSSRNDGRYIEIIGISIGGGTIKIKGIHINGLEVDLNHGLPILVV
                     DGNMSKAQVNHFINDINDMKLDCKDEFIKIDEDKCLVVIPLNKAISESTLNTIKEKYS
                     DVNVSYIN"
     gene            complement(9295..10338)
                     /locus_tag="O6Y56_001290"
     CDS             complement(9295..10338)
                     /locus_tag="O6Y56_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001551877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HDB5574545.1"
                     /translation="MDILLGVGTLVLVLVIMTLFLKYAPYGKQGLQALSGAACATFLP
                     QAFLSYAIGGVFDIKFLQDIGDLAGSLSGIAVGILTCLNLGVAPVFAVIVGLVLHDFK
                     LLPAFIAAYGVAFLIKWIEKKVPEGLDLIVVILIAPAIAFGLASIITPGVLATLKQIG
                     SAVTAVGDNNPYALAVILGLVIPVTGMTPLSSMVLTSLLGLTGVPMAIGALTCTGSSF
                     VNLILFRKLNIGGPSKAFAVCIEPLTQIDLIAQYPVQLYGTNALIGVVNACIVTFSGL
                     VIGVKGMATPIAGAIVLFGFNNAVTSIVTIATVIIVSIVLAYIIGTLINKFNLMNINF
                     KMPSKKNHIKESV"
     gene            10887..11090
                     /locus_tag="O6Y56_001291"
     CDS             10887..11090
                     /locus_tag="O6Y56_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574546.1"
                     /translation="MQLSHSVKVAISIYLALIFITFTSYLVIILYTSMTGHDVSHFVL
                     DSQHSHHGSLTQKHLSLPEISFK"
     gene            11273..12208
                     /locus_tag="O6Y56_001292"
     CDS             11273..12208
                     /locus_tag="O6Y56_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDB5574547.1"
                     /translation="MRYLANNHSALRLKGIILAIVGACLWGLGGTVSDFLFKYKNINV
                     DWYVTARLVVSGVFLLIMYKMIQPKRSIFSVFQDRRMLGKLLTFSILGMLVVQYAYMA
                     SINTGNAAIATLLQYIAPVYIIIWFVIRGVAKLTLFDVLAIIMTLLGTFLLLTNGSFS
                     NLVVNPASLFWGILAGVALAFYTIYPSDLLNRFGSILIVGWAMLISGVAMNLRHPIWH
                     IDITKWDISIILFLIFGIIGGTALAFYFFIDSLQYISAKETTLFGTVEPVVAVIASSL
                     WLHVAFKPFQIVGIILIMILILLLSLKRQPEALDE"
     gene            complement(12289..13257)
                     /locus_tag="O6Y56_001293"
     CDS             complement(12289..13257)
                     /locus_tag="O6Y56_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDB5574548.1"
                     /translation="MRKKWSTLAFGFLVAAYAHIRIKEKRSVKSYMLEQGIRLSRAKR
                     RFMYKEEAMKALEKMAPQTAGEYEGTNYQFKMPVTVDKHFGSTVYTVNDKQDKHQRVV
                     LYAHGGAWFQDPLKIHFEFIDELAETLNAKVIMPVYPKIPHQDYQATYVLFEKLYHDL
                     LNQVADSKQIVVMGDSAGGQIALSFAQLLKEKHIVQPGHIVLISPVLDATMQHPEIPD
                     YLKKDPMVGVDGSVFLAEQWAGDTPLDNYKVSPINGDLDGLARITLTVGTKEVLYPDA
                     LNLSQLLSAKGIEHDFIPGYYQFHIYPVFPIPERRRFLYQVKNIIN"
     gene            complement(13390..13734)
                     /locus_tag="O6Y56_001294"
     CDS             complement(13390..13734)
                     /locus_tag="O6Y56_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDB5574549.1"
                     /translation="MVKQLNSVEAFREFIHQYPLAVVHVMRDQCSVCHAVLPQIEDLM
                     QSYPNVPLAVINQSQVEAIAGELNIFTVPVDLIFMNGKEMHRQGRFIDMQRFEHHLKQ
                     MNDSVNNDVDEH"
     gene            complement(13776..14186)
                     /locus_tag="O6Y56_001295"
     CDS             complement(13776..14186)
                     /locus_tag="O6Y56_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDB5574550.1"
                     /translation="MTTEGLLVAEKEIEVNGYDIDAMGVVSNIVYIRWFEDLRTAFIN
                     QHMNYSTMINQGISPILMKTEAEYKVPVTIHDKPVGRIYLVKASKMKWMFQFEIVSAH
                     GVHCIGTQTGGFYRLSDKKITSVPQVFQDILATK"
     gene            complement(14547..16613)
                     /locus_tag="O6Y56_001296"
     CDS             complement(14547..16613)
                     /locus_tag="O6Y56_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIABC"
                     /protein_id="HDB5574551.1"
                     /translation="MFKKLFGQLQRIGKALMLPVAILPAAGILLAFGNAMHNEQLVEI
                     APWLKNDIIVMISSVMEAAGQVVFDNLPLLFAVGTALGLAGGDGVAALAALVGYLIMN
                     ATMGKVLHITIDDIFSYAKGAKELSQAAKEPAHALVLGIPTLQTGVFGGIIMGALAAW
                     CYNKFYNITLLPFLGFFAGKRFVPIVTSVVAIATGVVLSFAWPPIQDGLNSLSNFLLN
                     KNLTLTTFIFGIIERSLIPFGLHHIFYSPFWFEFGSYTNHAGELVRGDQRIWMAQLKD
                     GVPFTAGAFTTGKYPFMMFGLPAAAFAIYKNARPERKKVVGGLMLSAGLTAFLTGITE
                     PLEFSFLFVAPVLYGIHVLLAGTSFLVMHLLGVKIGMTFSGGFIDYILYGLLNWDRSH
                     ALLVIPVGIVYAIVYYFLFDFAIRKFKLKTPGREDEETEIRNSSVAKLPFDVLDAMGG
                     KENIKHLDACITRLRVEVVDKSKVDVAGIKALGASGVLEVGNNMQAIFGPKSDQIKHD
                     MAKIMSGEITKPSETTVTEEMSDEPVHVEALGTTDIYAPGVGQIIPLSEVPDQVFAGK
                     MMGDGVGFIPEKGEIVAPFDGTVKTIFPTKHAIGLESESGVEVLIHIGIDTVKLNGEG
                     FESLINVDEKVTQGQPLMKVNLAYLKAHAPSIVTPMIITNLENKELVIEDVQDADPGK
                     LIMTVK"
     gene            complement(16913..18652)
                     /locus_tag="O6Y56_001297"
     CDS             complement(16913..18652)
                     /locus_tag="O6Y56_001297"
                     /EC_number="1.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate oxidase"
                     /protein_id="HDB5574552.1"
                     /translation="MAKIKANEALVKALQAWDIDHLYGIPGDSIDAVVDSLRTVRDQF
                     KFYHVRHEEVASLAAAGYTKLTGKIGVALSIGGPGLIHLLNGMYDAKMDNVPQLILSG
                     QTNSTALGTKAFQETNLQKLCEDVAVYNHQIEKGDNVFEIVNEAIRTAYEQKGVAVVI
                     CPNDLLTEKIKDTTNKPVDTSRPKVVSPKYKDIKKAVKLINKSKKPVMLIGVGAKHAK
                     DELREFIEMAKIPVIHSLPAKTILPDDHPYSIGNLGKIGTKTSYQTMQEADLLIMVGT
                     NYPYVDYLPKKNIKAIQIDTNPKNIGHRFNINVGIVGDSKIALHQLTENIKHVAERPF
                     LNKTLERKAVWDKWMEQDKNNNSKPLRPERLMASINKFIKDDAVISADVGTATVWSTR
                     YLNLGVNNKFIISSWLGTMGCGLPGAMASKIAYPNRQAIAIAGDGAFQMVMQDFATAV
                     QYDLPLTVFVLNNKQLAFIKYEQQAAGELEYAVDFSDMDHAKFAEAAGGKGYTIKSAS
                     EVDAIVEEALAQDVPTIVDVYVDPNAAPLPGKIVNEEALGYGKWAFRSITEDKYLDLD
                     QIPPISVAAKRFL"
     gene            complement(18692..19381)
                     /locus_tag="O6Y56_001298"
     CDS             complement(18692..19381)
                     /locus_tag="O6Y56_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HDB5574553.1"
                     /translation="MNDYVQALLMILLTVVLYYFAKRLQQKYPNPFLNPALIASLGII
                     FVLLIFGISYNGYMKGGSWINHILNATVVCLAYPLYKNREKIKDNVSIIFASVLTGVM
                     LNFMLVFLTLKAFGYSKDVIVTLLPRSITAAVGIEVSHELGGTDTMTVLFIITTGLIG
                     SILGSMLLRFGRFESSIAKGLTYGNASHAFGTAKALEMDIESGAFSSIGMILTAVISS
                     VLIPVLILLFY"
     gene            complement(19374..19769)
                     /gene="cidA"
                     /locus_tag="O6Y56_001299"
     CDS             complement(19374..19769)
                     /gene="cidA"
                     /locus_tag="O6Y56_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin-like murein hydrolase modulator CidA"
                     /protein_id="HDB5574554.1"
                     /translation="MHKVQLIIKLLLQLGIIIVITYIGTEIQKIFHLPLAGSIVGLFL
                     FYLLLQFKIVPLTWVEDGANFLLKTMVFFFIPSVVGIMDVASEITLNYILFFAVIIIG
                     TCIVALSSGYIAEKMSVKHKHRKGVDAYE"
     gene            complement(19982..20860)
                     /locus_tag="O6Y56_001300"
     CDS             complement(19982..20860)
                     /locus_tag="O6Y56_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000351767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDB5574555.1"
                     /translation="MDIKHMKYFIEVVKQGGMTNASKSLYIAQPTISKAIKDIENEMG
                     TPLFDRSKRHLILTDAGQIFYEKSKEIVALYDYLPSEMERLNGLETGHINMGMSAVMN
                     MKILINILGAFHQQYPNVTYNLIENGGKTIEQQIINDEVDIGVTTLPVDHHIFDYTTL
                     DKEDLRLIVSREHRLAKYETVKLEDLAGEDFILFNKDFYLNDKIIENAKNVGFVPNTV
                     AQISQWHVIEDLVTNELGISILPTSISEQLNGNVKLLRIEDAHVHWELGVVWKKDKQL
                     SHATTKWIEFLKDRLG"
BASE COUNT         6560 a         3929 c         3139 g         7295 t
ORIGIN      
        1 tttgttcgta tcaatataaa attgcgaaac atcatgttat tttgcatttc aaactttttg
       61 ctatcaattc atttcctttt ctggtatact ttttatacta acttatagaa aaatagaaaa
      121 cgaggcgatg cataatggca tttcacgata aaacagcaac acaagtgaca aacattgaac
      181 tgaacgtaag agacttagac ttaatgacaa cattttacaa aaacatttta ggactatccg
      241 ttaaaagttc tgacgataac acaaccgtat tatctgttgg gactggtggc catactctaa
      301 cgttacattt attagaagac ggccgtcaga cttccccacg tgaagcaggg ctttttcata
      361 tagcattttt attaccaact actgaggatc tagctaactt cttatatttc gtggcacaaa
      421 aaaatatggg catcggcgct ggtgatcatt tagtaagtga agctttatat ttcaacgacc
      481 ccgaaggtaa tggtattgaa gtctatagcg atagaccttc atcttcatgg gaatggcaaa
      541 atggcaaagt taaaatggat actttagaag ttgatagcca aaccttatta acacatcgta
      601 ctgatgaagg ttggcaagga atgccagcaa aaggcatgat tggacactta catttaaaaa
      661 cacatgactt agacgcagca tatcattgtt acattgaaca attaggattc caacatgtgt
      721 ctgattttcc acgtgcgcta tttatgtcaa cgaatcatta tcaccatcat attgctgcta
      781 atacttggca atccaatcaa gcaagacaaa acaatgcaca aagttatgga ttaacacatg
      841 ttgatattta tcaacccgac gcctcaacac atacatttac ggcaccagaa ggttttgaca
      901 tcacagttca ttcaaatact gaccttgttc cagaaaaata atcatccata ctttattaat
      961 acaatttttt cacgcaaaag cctgcgattc atttatgtaa tcgcaggctt ttttattgct
     1021 aactttttaa ttttatatat ttagacatac tgtattctat ttattctttt ggtcaaaccc
     1081 attcaataac atcttcatat gcttggcgtg ttttattttt cggtggatct tgttgtctgt
     1141 agccaaatgc gaccatcact gataaaccaa attgctcagt atctaagatg cctttatttg
     1201 ctaaaatgtc tgtcactgta tccagactaa aaccttccat cggacatgaa tcaataccta
     1261 acaatgcggc tgtcgtcatc atattgccta atgcgatata cgtttgttta cttgaccagt
     1321 catacaaggc ttgatcatta tcagaaatat ggaaatctgc ttggaatgca tcgaattttt
     1381 gttcaacagc tggaatcgtt tgtgcctcat attttttaat atctcttaac atatgttgta
     1441 catacggtga tcttgacgtt acatttttac gcgcaaaaat tagcacaaaa tggctcgctg
     1501 tatctaattg tttcgctgcg ccccaactgt gcgcttttaa ttcatcacgt aacgcttgat
     1561 cttgaatcac gacaaacttc caaggttcta acccaagaga acttggagac aatctacctg
     1621 actctaatat tgtttcaaaa tcttctttcg aaactttctt ttgtggatcg aattgcttag
     1681 tcgcatgtct gaaatgaaat gcatccataa ttgtttgatt catattgctc attgaacata
     1741 gcctccaatt tttatattta ttgctataca aattatactt catgttttaa aaagactaaa
     1801 gtaatccgtt tgcaattcac tataacttgt gcacatgtta taagttttct gcaataaaac
     1861 acacttttga attttggaaa atttagtgtt ataatatatt tgtgatattt ttcacaatta
     1921 aattgtggcg tgattttaat gtacataatc tttaatttca ctcatttact tttcaatctt
     1981 ttaaaagcga ggtttttaat aatgacaaaa attatgttct ttggtacgcg tgattatgag
     2041 aaagagatgg cattaaattg ggggaaaaag aataatgtcg aagtaactac ttctaaagag
     2101 ctattatcaa gtgctacagt cgatcaatta aaagattacg atggcgtaac tacaatgcaa
     2161 tttggtaagt tagaaaatga cgtttatcct aaattagaat cttacggtat taaacaaatt
     2221 gcacaacgta ctgctggatt tgatatgtat gatttagatt tagctaaaaa acacaacatt
     2281 gtgatatcta acgttcctag ttattcacct gaaacaattg cagagtattc tgtttctatc
     2341 gccctacaat tagtgcgtcg cttcccagat attgaacgcc gtgtacaagc acatgatttt
     2401 acttggcaag cagaaatcat gtctaaacca gttaaaaata tgactgttgc aattatcggt
     2461 acgggtcgta tcggtgctgc tacagctaaa atatatgcag gatttggtgc tacaattaca
     2521 gcttatgacg cttatcctaa taaagattta gactttttaa cttataaaga tagtgttaaa
     2581 gaagctatta aagatgccga tattatttct ttacatgttc cagcgaacaa agaaagctat
     2641 catttattcg ataaagcaat gtttgatcat gtgaaaaaag gtgcaatctt agttaacgca
     2701 gcacgtggtg cagtcatcaa tacacctgat ttaatcgctg cagtgaacga tggtactttg
     2761 ttaggtgctg cgattgatac ttatgaaaat gaagcagcat acttcacaaa tgactggact
     2821 aataaagaca ttgacgataa aacattatta gagttaatcg aacatgaaag aattttagta
     2881 acaccacata ttgctttctt ctctgatgaa gcagtacaaa accttgttga aggtggttta
     2941 aacgcagcat tatctgtcat taacactggt acatgtgaaa cacgtttaaa ttaatatata
     3001 tttaaaagca aaggcgcgcc atgtgccttt gctttttatt ttgtatatct gtatcaaaat
     3061 cgatttgatt aaaatccgct ttattttatc atctatatca aatgactgta gtgcgcttat
     3121 tttactatgg cattattgcc taatctgttt gagatatatt aatatttgat gattcgtatt
     3181 caaagttttc atttaacatg tatttagtat catgatagct gcttcattga tgatatacta
     3241 cctacttttt caacacttct tgttcgataa tcgttaaaac accctgctta tcattgcttg
     3301 gagcgacagc agaggcaata ttgaacaatt cttcatcatg actattttcc atcacataac
     3361 tatgcttagc gaacgcaagc atatctttat cattattcgc atctccgaag gccatgagct
     3421 ctgaaggaga catttcccat ttatctaaca atcgttttaa tgcctgccct ttagtcatgt
     3481 ttggcataat aatatcaata ctatcgtgcc cacttgagac aagtttaata tcattgctga
     3541 attgcgttgc tacttcttcg tcaacattcg gatgcgtctc acgattaata ttaaatgcta
     3601 ttttgacata atcatcctca ggtaattgct gtagactgtc aatttctttt aactgatgat
     3661 aataaaatct cgtatcttct ttaaacgctt cagaagtatg ttttaaaata tacgcgcttt
     3721 tcaaaccaca gatgacgagt tgatcaatac cttggttcat atttaagtaa tcgacaacct
     3781 gttgaaacac ctgacgatta aagcttttat aattatataa ctcattgcct ttataaataa
     3841 ctgcaccatt ttcagaaata aaatacatat ctctatcccc gaaaatagac ttcaacttcg
     3901 catattgatt gccactcgca gcaataaatg taatatctct atttctaagt tcagtaaaaa
     3961 tcgtttcaaa ccttgattta tcgtatgtct ttttcgaatc taaaaacgtc ccgtccatat
     4021 ctaccgcaat agccttaacc atgattatcc tcctcattgc tcttttagtc gtcttcatta
     4081 tatccatctc atgacaagca atgaagtttg tcataccaca atgaacctat attcacattt
     4141 tgaaattgct ttcatatatg caaaacacat tacaccggat atagcattca gaggcgagca
     4201 taaatttcag aatattgtaa aaatataatg aagcatttat catttggaca aaatatagtg
     4261 tgatatacta atttataaca tctatacata atgtgaaaga atttttaaaa atacaattaa
     4321 atatcggtgt aataaatccc tttatacata ggagttgtat acatgaaact aaataactat
     4381 tctttaaaag ttaaaaacaa acaactagtt gacaattgtg atttaaattt ctatcttggt
     4441 cagatcaatc acattgttgg taaaaatggt gtaggaaaat ctttgttagc taaagatttc
     4501 ttactaaata atagtggaaa tatccctaag tccatttctc aaaatgtaac cttaatatca
     4561 agttcatcaa atattcctaa tgatataaca aaagattttt tattatcatt gttaaaatca
     4621 aaatttgaaa acaatcgaca aacattcgat aagatttata acatactaaa catcgaagca
     4681 ataccgtcta acgtactact aaaaaacttg agtgatggtc aaaaacaaaa gcttaaatta
     4741 ttaagtttct tattggaaga tcatgattta atcatattag atgaaattac aaacgcttta
     4801 gacaagaaaa cagttaatga aatttatgaa tttttaaatg attttattca aagccatcaa
     4861 actaaaacta ttatcaatat tacacataat ttatccgatt taagtgcttt gccgggtaaa
     4921 tactttattt ttaaagacct tcaaatagaa gagtaccaat caaaagaaga agtcataaat
     4981 gattacatta atttataatt gaggtgtcca ctttgaaatt agaatttaaa aaaagtattt
     5041 ccaataaaat tatttacacg cttggtgtgc tattcatatt ccttttctta cttgggtatt
     5101 ttttaccaat aggtattgat aaagttaaaa atttaagcta tggtcagttt ttcttcagtt
     5161 catatactgt tgcaacgcaa ttagggttct tactattttc atttgttttt gcatatttta
     5221 ttaataaaga gtattcgaat aaaaatatcc tgttttataa attgattggc gataatatat
     5281 ttaccttctt ctataaaaag gtggcagtgt tattttttga atgtttagtg ttcataattc
     5341 taagtatcac aattatttca attatatatt cgaatttctc acattactta ctattaataa
     5401 tcttattttc actcgttatc ttacaatata tcttagttgt tggaacgatt agtatggttt
     5461 cacctaacat tttaatcagc ttaggtatca gcattgtata ttggattggt tcagtcatct
     5521 tagttgccat taataaaaat atatttggta tcgttgctcc atttgaggcg agcaacacga
     5581 tgtatcgtgc cgtagaaaaa atattgaata acgagtcaac atttatgtgt cctactgaaa
     5641 ttataaatac agtatcattc ttcgttcttc tacttatagt taatactatt gtcttattgc
     5701 taagtagaaa gagatggttg aaaatcggta tgtagtacat aaaaaggagc ggcatccatt
     5761 gtcgcttctt tttattatgt atttttacaa tctccaccaa tgacacgtcg tcattggtgc
     5821 ctcagaccaa acaaaaaaca gtctcgcaat caagactgtt ttccactcaa tatattcatc
     5881 cattagcgta atggattatt taacttcagt agctacaaag attttacgtg tttcccaaac
     5941 gcctgtcttt tcattgtaat catcacaagt aattaatgtt aattgtttat ctttaccttt
     6001 ttgttcatct agaacttcta catctgtagg cttaacatct cttatacttg tcattttata
     6061 cttacgtgtt tcattaccaa ctttaaagta caccatacta ccttttttgg ctgctttaag
     6121 atttgtaaat tgatagttcg gacggtcaat gaaagtgtgt cctgcaattg aaatattttg
     6181 atcatctagt gattcatttt cttctgcaaa gcttacacct ctatttaatt gttcaggtgt
     6241 tgctggtcct ggatatactg gttctttaat atcagcatct ggaatttcaa tatagcctgc
     6301 cactttcgat ttatctttcg gaatttgagg tttagcttgc tgctttttat ccttactcgc
     6361 ctgttctttt acattttcat catattgttc aatcttttca tctttatctt tatcgtgaag
     6421 ataattatcg atatgtggtt tagcaaacaa atatgctgcc actaggataa gtaccacacc
     6481 agcgattgtc attaatcgat ttgtccattt tttcatacgt taaggctcct tttatacatt
     6541 tcacaatgcc tattaacatt tcatatagta taccattaat ttcaaaatga ctcatagcaa
     6601 ttcattttat actataaaat ttacatgtat acttttacgt tagatttcat tacacatatt
     6661 tgcattcaaa taacgaaacg cttttaataa ttactaaggg ggaattgtta tgattagatg
     6721 cgctaaaaaa gaggatttaa acgctatatt agcgatatac aatgatgcca ttatcaatac
     6781 tacagctgtt tatacttatg aaccacaaac catagacgaa cgtgtcgcat ggtttgaaac
     6841 gaaacaacgt aagcatgagc ctgtctttgt atttgaggaa aatggaagtg tcttagggtt
     6901 tgcgacgttc ggttcgttta gaccttggcc agcataccta tatacaatcg aacattctat
     6961 ttatgtcgat gcttcagcta gaggaaaagg tattgctagt caattactac accatttaat
     7021 tgttgaagca aaagctaaag gttatcgtgc gctagttgca ggcattgatg cttccaataa
     7081 agcgagtatt cagttgcatc aaaagtttgc ttttaagcat gccggcacac tgaccaatgt
     7141 aggttttaaa tttaatagat ggttagattt agcattttac gaattagatt tacaagacta
     7201 gtaatgtttg aatcacataa tataaacaag acaaccatgt caattcactt aacataacaa
     7261 gccaacatat aaaattttaa acttctcagg gacaatttac atcgtccctt ttattttttc
     7321 ttttcaaatt ctatccccat agctttgatt taacgctttt tctcaataac aaaacgaata
     7381 tagtagaaca tgaaaacgat aatcatgctg agcgataaag atttaaataa tagattgacc
     7441 cacgttccct cagtcgtata tccatatgta atcgttgtgt taatgatgaa tgctataaag
     7501 atgattgata gtcttagcat atcatcactc cttttaagtt attttagata tacgggggcg
     7561 cttttgcaat cactattttg attagcatgc atttcccata aatttttcaa ctttatgaaa
     7621 gataattaag aagcatctat ctggtacgaa tgatccagac agatgcttct tttttatcaa
     7681 tatcttatta ttatctcatt aattattttt aaccatatct tcagctgtgc caaagatttt
     7741 acgtttaatt gcttcgccag ttggtgtgcc tgctagtcca cccaatccag tttcacgtaa
     7801 tgatgcagga aggttacgac caaccttatc cattgcttca ataacttcat caacagggat
     7861 tctactttca atacctgcta atgctaaatc tgctgaaatt aaagcgttac ctgaaccaat
     7921 tgcatttctc ataacacaag gaatttcaac aagtccggct actgggtcac aaactaaacc
     7981 taataaatta cttatcgcta atgccatagc gtgcccggat gcttctggtg atcctccgaa
     8041 tatagctact gctgcagctg ccgccattgc agatgctgaa ccaacttcag cttggcagcc
     8101 acctgttgca ccagctacac ttgcattgtt tgctacgaca cgcccaaaca atgctgaagt
     8161 gaataagaag tcaatcattt gctcttctgt taaatcatgt gttttttcta atttaaaaag
     8221 tgcaccggga atggtacccg aggaaccagc tgttggcgtt gcacaaataa tacccatcgc
     8281 agcattgact tcatttgttg caatggcacc tttgactgca tcaatcattt catatccaga
     8341 caaagcatga tgtgtttcat tataatcacg tagtttagca gcgtcatgac cagtgtagcc
     8401 cgttacactt tcaacgccat cacctgttgt ccctttgatt actgcgtctc gcatgacatc
     8461 taaattttgt ttcatttgcg ctcgcacttc atcacgtgat ttaccgctta attccatttc
     8521 ttctttaacc atgatatccg caaatgacat attattttct acggcataat ctatagtctc
     8581 tctaattgaa tcaaacatgt ttattccccc tctaatttat ataggaaacg tttacgtcac
     8641 tgtatttctc tttaattgta tttaatgtcg attctgagat tgctttattt aatggtatta
     8701 caaccaagca tttatcttca tctatcttaa taaattcatc tttacagtct aatttcatat
     8761 cgttgatatc attaatgaaa tgatttactt gtgctttact catatttccg tcaacaacta
     8821 aaattggtaa tccatgattt aaatctactt ctagtccatt tatatgaata cctttaattt
     8881 taattgtacc accaccgatt gaaataccga taatttcaat gtagcgacca tcattacgag
     8941 atgatttaat ataagcacag tttggatgtt gaccaatact atcgccttct tcttcgatga
     9001 tatctatttt aataccatca tcagctgcaa tttctaatga agatttaatt cggttatcaa
     9061 atgttgaata tcccattgct ccacccacaa tagcgacatc tgtaccatgt ccttggtgtg
     9121 tttgagcaaa tgattcataa taatgtattt caatattttt aggaatatct cccaatattg
     9181 cgcgtgctga attcccaatc tttactgcac cagccgtatg agaacttgaa ggtcccatca
     9241 taactggtcc gataatatcg aaagcacttt gataatcata gctctttgcc ataattaaac
     9301 actctcctta atatgattct ttttactcgg cattttaaag ttgatattca ttaaattaaa
     9361 cttattaatt agtgttccaa taatataggc taagacaatg ctgacaataa tcactgttgc
     9421 gattgttaca attgatgtca ctgcattatt aaagccaaac aatacgatgg cacctgcaat
     9481 tggtgttgcc atacctttga cacctattac tagtccgcta aatgtcacga tacatgcgtt
     9541 gacgacccca atcagtgcat ttgtaccata tagttgtact ggatattgcg ctattagatc
     9601 aatttgcgtc aatggctcaa tacaaactgc aaatgctttt gacggtccac caatgtttaa
     9661 ttttcggaat aaaataaggt taacaaatga gctacctgta catgttagtg ctccaatagc
     9721 cataggaaca cctgtcagtc ctaataaact tgttaatacc attgaactta gcggtgtcat
     9781 acctgtaaca ggaatcacta gtcctaaaat gaccgctaat gcatatggat tgttatcacc
     9841 taccgcagtg acagcactac ctatttgttt taatgttgct agcacaccag gtgtaatgat
     9901 tgatgcaagt ccgaaagcaa ttgctggtgc aattaagatc accacaatta agtccaagcc
     9961 ttctggaact ttcttttcaa tccatttaat taaaaaagct acgccataag ctgcaatgaa
    10021 tgctggtaat aatttaaagt catgtaatac taaaccaaca ataaccgcaa atactggtgc
    10081 aacgcctaag tttaagcacg ttagaatacc tactgcgata ccgcttaaac ttcctgctaa
    10141 atccccaata tcttgtagaa atttaatatc aaatacgcca ccaatggcgt aacttaagaa
    10201 tgcttgtggt agaaatgtcg cacaagctgc accggataat gcttgtagtc cttgtttacc
    10261 gtacggtgca tactttaaaa atagcgtcat gatcactaaa accaagacta atgtgcctac
    10321 acctaacaga atatccattt cccaaaaacc tctctctatg tttattttat tttcagacca
    10381 taaacatcgt acacccttaa gaaaacgttt tcaactttta tctgttatca aatcaaatat
    10441 ttaagtgaaa tatttcatat ttgtgaaaga tttttaaaat ggattgtttc aaaaactact
    10501 tatgttgtcg ttaatattta ctaattaact ttttactcta tatttcaaac agttgtgtga
    10561 cagttttttg ataacttttt tacatctgaa agtaagtaat atttctaaag atttttaata
    10621 tttatacatt ttatctttcg agctatttat ttttgttttt gtgctgtatt tataaaaccg
    10681 cacactatat tcaaaaataa cttattacac atatatttgc aataagataa ttaaagtagg
    10741 atattatttt tagttttctg ataggaatga tgatagtcta taggttgaat ctttactttt
    10801 tttaaagcta aatttacatc aacttaacaa tggctggtta tactgaagat gaaaatattt
    10861 agtataactt agtggaggcg gtaaagatgc aattgagtca ttccgttaaa gttgcaattt
    10921 ctatctattt agcacttatc tttataacgt tcacttctta tttagtcatt attttatata
    10981 cgagtatgac tggacatgat gtatcacatt tcgtgttaga tagtcagcat tctcatcatg
    11041 gatctcttac gcaaaaacat ttgagtcttc ctgaaatctc atttaaatag tttatcctct
    11101 gtgtttcaac attcatttcc catatcgatt catttatcta tcatctagac cactacatct
    11161 tagatgattt ttttattttc tcatttcact ctttcttaaa agtcgatata atgaattaaa
    11221 tcattatcat acactgacat attttatgtt gttggtgtta agttttatag gggtgagata
    11281 cttggcgaat aatcattcag ctttgcgttt aaaaggaatt atacttgcca ttgtcggtgc
    11341 ttgtttatgg ggattaggtg gtactgtttc tgatttcttg ttcaaatata agaatattaa
    11401 tgtcgattgg tacgtcactg ctcgacttgt agtcagtggt gttttcttac ttattatgta
    11461 caaaatgata caacccaaac gttctatatt tagcgtattc caagatcgac gtatgttagg
    11521 caaattactt accttcagta tactgggcat gttagttgta caatatgctt atatggcatc
    11581 tattaataca ggtaatgctg cgattgcaac attactacaa tacattgcgc cagtttatat
    11641 tattatttgg tttgtcataa gaggcgttgc aaaactaaca ttatttgatg tgcttgctat
    11701 tatcatgaca ctattaggaa catttttatt attaacgaat ggttcatttt ctaatttagt
    11761 cgtcaatcct gcaagtttat tctggggtat tttagctggt gtagcactcg ctttttacac
    11821 aatttatcct tcagacctac ttaaccgctt cggttcgatt ctaattgtcg ggtgggcaat
    11881 gcttatttct ggtgttgcga tgaatttacg ccatccaatt tggcacattg atatcactaa
    11941 atgggacata tcaattatat tatttttaat ctttggtatt atcggtggta ccgcactcgc
    12001 attttatttc tttatcgaca gtttacaata catatcagcg aaagaaacaa cattattcgg
    12061 aactgttgaa cctgtcgtag ccgttatcgc aagcagtcta tggttacatg tggcattcaa
    12121 accatttcaa atcgtaggca tcatacttat tatgatttta attttattac tatcacttaa
    12181 aagacaacct gaagcattag atgaataaga aaactctgat aatcacttta gcaagtaact
    12241 atttttaaca acgtagctac cttataggtg atatcagagt tttttatttt agttaataat
    12301 atttttcact tggtataaaa agcgtcggcg ctctggtatc ggaaatactg gataaatatg
    12361 gaattggtaa tatccaggta taaagtcatg ttcgatacct ttcgcactca acaattgcga
    12421 taagttcaaa gcatctgggt acagtacttc ttttgtacca acagttaatg taatacgagc
    12481 taaaccatct aagtcaccat taattggtga tactttgtag ttatctaaag gtgtgtcccc
    12541 tgcccattgt tcagctaaga acacactgcc atccacacct accattgggt ctttctttaa
    12601 gtagtcagga atttcaggat gctgcatcgt tgcatctaaa actggtgaaa ttaatacaat
    12661 atgtcctggt tgcacaatat gtttttcttt taacaattga gcaaatgata aagcaatttg
    12721 accgcccgca gagtcaccca ttacaacgat ttgtttagaa tctgctactt gattcaataa
    12781 atcatggtac aacttttcaa aaagcacata cgtcgcttga taatcttgat gcggaatctt
    12841 cggatatact ggcatgatga ctttagcatt gagtgtttct gcaagttcat caataaattc
    12901 gaaatgaatt ttgagtgggt cttggaacca tgcgcctcca tgtgcgtata atacaacgcg
    12961 ttgatgctta tcttgtttat cattaacggt ataaacggtt gaaccgaagt gcttatccac
    13021 tgttactggc atcttaaact gataattggt gccctcatat tcacctgctg tctgtggcgc
    13081 cattttttct aatgctttca tcgcttcttc tttatacata aaacgacgct tagctctaga
    13141 taatcgtata ccttgttcta acatataact tttcacactg cgtttttctt taattctaat
    13201 atgtgcgtat gccgctacta aaaatccaaa cgcaagtgta gaccattttt tacgcatttg
    13261 tcgtcactcc tctttgatga tttctactat agctctactg taccatgctg attcttatta
    13321 ctaccaatat ttactgggaa ataagttatg atgtctacat aatcttagca atgctaatca
    13381 tttgcgatat taatgctcat cgacatcgtt attcacacta tcattcattt gcttaagatg
    13441 atgttcaaaa cgttgcatat cgataaaacg cccttgacga tgcatttctt ttccattcat
    13501 aaagattaaa tccacaggta cagtgaaaat atttaattct ccagcaatag cttccacctg
    13561 actttgatta atcacagcta atggcacatt gggatatgat tgcatcaagt cttcaatttg
    13621 tggtaaaacg gcatgacaca cgctacactg atcacgcatg acatgtacaa ctgctaacgg
    13681 atattgatga ataaattcac ggaatgcttc gacactattt aattgcttaa ccatttcgaa
    13741 caccttctta ctttttatat tttaaaatga agtcactatt ttgttgctaa aatgtcttga
    13801 aatacttgtg gcacagaggt aatcttctta tcgctcaatc tgtaaaaacc gcctgtctgt
    13861 gtaccaatac aatgcacgcc atgtgcggac acaatttcaa actgaaacat ccatttcatc
    13921 ttgcttgctt taactaagta aatacggcct actggtttgt catgtattgt gacaggtact
    13981 ttatattctg cttccgtttt cataagtata ggtgaaatgc cttgattgat cattgttgag
    14041 taattcatgt gctgattaat aaacgctgtt ctcaaatctt cgaaccatct aatataaacg
    14101 atattactaa cgacacccat cgcatcaatg tcgtaaccat tcacttcgat ttctttctct
    14161 gcaactaata gaccttctgt tgtcataatg acaaatctcc ttatcttaca aatagattta
    14221 aaatcatgtt aatttatttt tattactttc atgataaaaa tacaagcaat tgaactttat
    14281 tacggaaaat caaacttttc aatgacgcta ttaatttggc tagtcgcgaa gatgcatttt
    14341 tctaaaaagt gacataaaca taagcaatgt tttctatatc taacactaat gtttacctta
    14401 ttctcatcaa cacgcactaa aaaggcagta gcttcatttt aagctactgc cttttgtacc
    14461 gtattctctt tcaactcgct acttcgcata cgcactacga atgactaaaa gttcattcat
    14521 ttgatatgct atttcatttt caatcattat ttgactgtca taattagctt acctggatca
    14581 gcatcttgta catcttcaat gacaagttct ttattttcaa gatttgtaat aatcattggt
    14641 gtaacgatgc ttggtgcgtg cgctttcaag tatgctaaat tcactttcat taatggttga
    14701 ccttgtgtta ctttttcatc aacgttaatc agactttcga atccttcacc attcagtttc
    14761 actgtatcga taccaatatg aataagtact tcgacaccac tttcagattc taatcctatc
    14821 gcatgtttcg tagggaagat tgttttcact gtaccatcaa acggtgctac aatttcacct
    14881 ttttcaggga taaagccaac accatcaccc atcattttac cagcgaatac ttgatcaggt
    14941 acttctgata atggaatgat ttgaccgaca cctggtgcat agatgtctgt tgttccaagt
    15001 gcttctacgt gaactggttc atctgacatt tcttcagtca ctgtcgtttc acttggtttc
    15061 gtaatttcac cactcataat cttggccata tcatgtttaa tttgatctga ttttggacca
    15121 aagatagctt gcatattgtt tccaacttct aatacacctg atgcgcctaa agctttaata
    15181 cctgcgacat ctacttttga tttatcaacc acttctacgc gcagacgtgt aatacatgca
    15241 tctaaatgtt taatattttc ttttccaccc attgcatcta agacatcaaa tggtaatttt
    15301 gcgacactag agttacgaat ttcagtttct tcatcttcac gacctggtgt tttcaattta
    15361 aacttacgaa ttgcaaagtc gaataagaag taatacacga tagcgtatac aataccgact
    15421 ggaataacta ataatgcgtg tgaacgatcc cagtttaata aaccatataa aatataatct
    15481 atgaaaccac ctgagaatgt cataccaatt ttaacgccta ataaatgcat tactaagaat
    15541 gatgtaccag ctaataatac gtgaattcca taaagtactg gtgctacaaa taagaatgaa
    15601 aattctaatg gctcagtgat accagtcaaa aatgcagtta atcctgctga taacattaaa
    15661 ccacccacga cttttttacg ttctggtcgt gcatttttat aaatagcaaa tgccgccgct
    15721 ggtaaaccaa acatcataaa tggatattta ccagtagtaa atgcaccagc agtaaatggt
    15781 acgccatctt tcaattgtgc catccaaata cgttggtcac cacgaactaa ttcacctgcg
    15841 tgatttgtat aacttccgaa ttcaaaccag aacggtgaat agaaaatatg atgtaaacca
    15901 aatggaatta atgagcgttc aataataccg aatataaacg ttgttaatgt taaattttta
    15961 tttaataaga aattcgataa actatttaat ccgtcttgaa ttggtggcca cgcaaagctt
    16021 aaaaccacac ctgttgcaat cgctacgacc gatgtcacaa tcggtacaaa tcgtttacct
    16081 gcaaagaatc ctaaaaatgg tagtagtgta atgttataaa atttgttgta gcaccatgct
    16141 gctaaagcac ccatgataat accaccaaac acacccgttt gtaatgttgg aatacctaat
    16201 actaaggcat gtgctggttc tttcgctgct tgacttaatt cttttgcccc tttggcatat
    16261 gagaaaatgt catcaattgt aatgtgcaac actttcccca ttgttgcatt cataattaag
    16321 taacctacta gcgctgctaa tgctgcaaca ccgtctcctc ctgctaatcc aagtgctgta
    16381 ccaactgcaa ataataatgg caagttatca aatacaactt gtcctgctgc ttccatgacc
    16441 gacgaaatca ttacaatgat atcgtttttt aaccatggtg caatttctac taattgttcg
    16501 ttgtgcattg cgttaccaaa cgctaataaa ataccagctg ctggtaaaat cgcaacaggt
    16561 aacattaatg ctttaccgat acgttgcaat tgtccaaaca atttcttaaa catataaaca
    16621 tcccctatct caatttccgc ttccatgtac aaaaaagcag acatgaacaa acaagactat
    16681 tctcatagta cggttgtttg ctcatgcctg cattaccagt aacacgcaag tgatatgtaa
    16741 ttcatagcta ttatacatat ttgtaaaagc gttttcaaca actttttcac aattttatca
    16801 tcaattcagt acaatcattt gtgataaata aacaaaacgg caattcccat tttgttgaaa
    16861 tagaaattac cgtttttata gttcaattca attgtgataa cctttcaatc agttataaga
    16921 aacgttttgc tgcaactgaa ataggtggaa tttgatctaa atctaaatat ttatcttcag
    16981 taatagatct aaatgcccat ttaccataac caagcgcttc ttcatttaca attttacctg
    17041 gtaatggcgc agcattagga tcaacataaa catctacaat tgttggtaca tcttgtgcta
    17101 gtgcctcttc tacaatagca tctacttcgc tagcactttt aattgtataa cctttaccac
    17161 ctgctgcttc agcaaatttg gcatgatcca tatcagagaa atcaaccgca tattctaatt
    17221 caccagcagc ttgttgttca tatttaataa acgctaattg cttattattt agaacaaaca
    17281 ctgttaaagg taaatcatat tgtacagctg ttgcaaagtc ctgcatcacc atttggaatg
    17341 caccgtcacc agcaattgcg atggcttgtc tatttggata tgcaattttt gatgccattg
    17401 cacctggaag accgcaaccc attgtaccta accaacttga aatgatgaac ttgttattta
    17461 caccaaggtt taagtatcgt gttgaccaaa ctgttgctgt acctacatct gctgaaatca
    17521 ctgcatcatc tttaataaat ttattgattg atgccattaa tcgttctgga cgtaatggtt
    17581 tactattatt atttttatct tgttccatcc atttatccca aaccgcttta cgttctaacg
    17641 ttttgtttaa gaatggtctt tcagcaacat gtttaatatt ttcagttaac tgatgcaacg
    17701 caattttact atctccaaca attcccacat taatattgaa acgatgtccg atatttttag
    17761 gatttgtgtc aatttgaatg gctttaatat ttttcttagg taagtaatcc acatatggat
    17821 agtttgtacc aaccataatt aataaatccg cttcctgcat tgtttgataa gatgttttgg
    17881 taccgatttt acctaagtta ccgatactat atggatgatc atccggcaag attgttttag
    17941 ctggtaatga atgaatgaca ggaattttag ccatttcaat aaattcacgt agctcatctt
    18001 tcgcatgttt cgcgcctaca ccaattaaca tgacaggctt tttactttta ttaattagtt
    18061 taaccgcttt tttgatgtct ttatattttg gtgatactac ttttggtctt gatgtatcta
    18121 ctggtttatt cgttgtatct ttaatttttt cagttaataa gtcgttagga caaataacaa
    18181 cagctacacc tttttgttca tatgccgtac gaattgcttc gttaacgatt tcaaacacat
    18241 tgtcaccttt ttcaatttgg tgattataaa cggctacatc ttcacataat ttttgtaaat
    18301 ttgtttcttg aaatgctttc gttccaagtg ctgtactatt cgtttgtcca gataatatta
    18361 attgcggtac attatccatt ttggcatcgt acataccatt taataaatga attaaaccag
    18421 ggccaccgat acttaatgcc acaccgattt taccagttaa ttttgtgtaa ccagcagccg
    18481 ctaagcttgc tacttcttca tgacgtacat gataaaattt aaattgatct ctcactgtac
    18541 gtaaactatc gactactgcg tcgattgagt ctcctggaat accatacaag tgatctatat
    18601 cccatgcttg taatgcttta actaatgctt catttgcttt tatttttgcc attattacta
    18661 atagcctccc tttcttagtg tctttttcta attagtaaaa tagtaagatt agaacaggta
    18721 ttaacactga actaataact gcagttaaaa tcatcccaat tgaactaaat gcaccggatt
    18781 caatatccat ttctagtgct ttagctgtgc caaatgcatg tgacgcattc ccatacgtta
    18841 aacctttggc gatagaagat tcaaatcttc caaatcttaa taacatcgaa cctaaaatac
    18901 taccgattaa acccgttgtg ataataaaaa gtacggtcat cgtatctgta ccacctagtt
    18961 catgtgacac ttcgatacct actgcggctg ttatagatcg gggcaataac gttacaatga
    19021 cgtctttaga atagccaaat gctttaagtg ttaagaacac taacatgaaa ttcagcatga
    19081 cgccagttaa tacacttgca aaaatgatag agacattgtc tttaattttc tctctatttt
    19141 tataaagtgg gtacgctaaa catacaaccg ttgcgtttaa aatatggttg atccaactgc
    19201 cacctttcat atacccgtta taactaattc caaagataag taagacaaaa ataattccta
    19261 aagatgcaat taatgctgga ttcaaaaatg ggttcggata tttttgttgt aaccttttag
    19321 cgaaataata taaaacgaca gtcaacaaaa tcattaataa ggcttgcacg taatcattca
    19381 taagcgtcta cacctttacg atgtttatgt ttaacagaca ttttttcagc aatataacct
    19441 gaagataatg caacgatgca tgttcctata ataatgactg cgaaaaagag tatataattt
    19501 agcgtaattt cggaagcaac atccataata cctacaactg acggtatgaa gaaaaagacc
    19561 atggtcttta ataaaaagtt tgcaccgtct tctacccaag ttagcggtac aatcttaaat
    19621 tgtaatagta aataaaataa aaatagacca acaatactgc cggctaaggg aagatgaaaa
    19681 atcttttgaa tttctgtgcc aatataagta atcacaatga tgattcctag ttgtagtagt
    19741 agtttgatta ttaattggac tttgtgcatg gcgccatccc tttctaaata tgtctaaatt
    19801 gttacaataa ctattataaa gatggcgtac acaatataaa aatactcttt ttttatagtt
    19861 tgtattacta ttttctatgg aaacgctctc taaatttcac ttcattttca caaaaaaaca
    19921 ctcattattt caatgaccca cgcaatgatg cgccttaaat aatgagtgct ttattaatat
    19981 gttagcctaa acgatctttc aaaaattcta tccatttcgt tgtggcatga cttaattgtt
    20041 tatccttctt ccaaacaaca cctaattccc aatgtacatg cgcatcttca atgcgtagta
    20101 gcttcacatt tccatttagt tgctctgaaa ttgatgttgg taaaatacta atacctaatt
    20161 cattcgtaac taaatcttct ataacatgcc attgtgaaat ttgcgctaca gtattcggaa
    20221 caaagccaac gtttttagca ttttcaataa ttttatcatt caagtaaaag tctttattaa
    20281 ataaaatgaa gtcttcacct gctaaatctt cgagtttaac agtttcatat tttgcgagtc
    20341 gatgctctct gctcacgata agtcgcaaat cttccttatc tagggtagta taatcgaaaa
    20401 tatgatgatc gactggcaaa gtggtcacgc ctatatctac ttcatcattg ataatttgct
    20461 gctcaatcgt ttttccgcca ttttctatta aattatatgt aacatttgga tattgttgat
    20521 ggaatgcacc aagaatattg ataagaatct tcatattcat gactgccgac atacccatgt
    20581 ttatatgccc tgtttccagt ccattcaagc gttccatttc agatggtaaa taatcataca
    20641 gtgcaacaat ttctttactt ttctcataaa aaatttgacc tgcatcggta agtattaaat
    20701 gtcttttact tctatcaaat aagggcgtgc ccatttcatt ttcaatatct ttaattgctt
    20761 tactaattgt aggttgtgca atatataatg atttggaagc attagtcatg cctccttgct
    20821 taacgacttc aataaaatat ttcatatgtt tgatatccac taacatcatc ctaactattt
    20881 caacacgttt atttcattat acacaacttc ttaaacattc aat
//
LOCUS       DALMNS010000041        20780 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.041, whole genome shotgun sequence.
ACCESSION   DALMNS010000041 DALMNS010000000
VERSION     DALMNS010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20780
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.041"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(143..703)
                     /locus_tag="O6Y56_001301"
     CDS             complement(143..703)
                     /locus_tag="O6Y56_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HDB5574556.1"
                     /translation="MSRKTALLVLDMQEGIASSVPRIKNIIKANQRAIEAARQHRIPV
                     IFIRLVLDKHFNDVSSSNKVFSTIKAQGYAITEADASTRILEDLAPLEDEPIISKRRF
                     SAFTGSYLEVYLRANDINHLVLTGVSTSGAVLSTALESVDKDYYITVLEDAVGDRSDD
                     KHDFIIEQILSRSCDIESVESWKSSL"
     gene            complement(872..2767)
                     /gene="sasF"
                     /locus_tag="O6Y56_001302"
     CDS             complement(872..2767)
                     /gene="sasF"
                     /locus_tag="O6Y56_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell-wall-anchored protein SasF"
                     /protein_id="HDB5574557.1"
                     /translation="MAKYRGKPFQLYVKLSCSTMMATSIILTNILPYDAQAASENDTE
                     ISKEILSKQDLLDKVDKANRQIEQLKQLSASSKAHYKAQLNEAKTASQIDEIIKRANE
                     LDSKDNKGSHIEMNGQSDIDSKLDQLLKDLNEVSSKVDRGQQSGEDDLNAMKNDMSQT
                     ATTKHGEKDDKNDEAMVNKALEDLDQLNQQIHKSKDASKDTAVSTTDNKNEVAKTPNN
                     DGSGHVVLNKFLSNEENQSHSNRLTDKLQGSDKINHAMIEKLAKSNASTHHYTYHKLN
                     TLQSLDQRIANTQLPKNQKSDLMSEVNKTKERIKSQRNIILEELARTDDKKHATQNIL
                     ESIFNKDEADKILKDIRVDGKTDQQIADQITRHIDQLSLTTSDDLLTSLIDQSQDKSL
                     LISQILQTKLGKSEADKLAKDWTNKGLSNRQIVDQLKKHFASTGDTSSDDILKAILNN
                     AKDKKQAIETILATRIERQKAKLLADLITKIETDQNKIFNLVKSALNGKADDLLNLQK
                     RLNQTKKDIDYVLSPIVNRPSLLDRLNKNGKTTDLNKLASLMNQGSNLLDSIPDIPTP
                     KPEKTLTLGKGNGLLSGLLNADGNVSLPKAGETIKEHWLPISVIVGAMGVLMIWLSRR
                     NKLKNKA"
     gene            complement(3009..4367)
                     /gene="gtfB"
                     /locus_tag="O6Y56_001303"
     CDS             complement(3009..4367)
                     /gene="gtfB"
                     /locus_tag="O6Y56_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system glycosylation chaperone
                     GtfB"
                     /protein_id="HDB5574558.1"
                     /translation="MIKLFDYFNDHSRKLYESFKASKLEEDLTIVLNDNGFLPDDVIS
                     PYQFFADNHNTENMKPRFFNQVTVPAFWEIKGNNNSATINDMGRLRGKIFYQSGERPR
                     IVSRVEWFDDQQRVRFVDYYSKNGIKFAQTVYDLNRKAILKKYMTAEGKEVIYENFVT
                     SDVILDWQGKSYFFPSKLAFVLFFIKQLEITEHHFVINSLALPFSVLYNLPSNGSDVL
                     VWQEQCDGNVPGNMQLMCKGDMKRHCNIIIPDKNEYETMLNIADAKVQSRILQGGYLY
                     NYRSRNRYTKEIVILTNSDQLRNIKVLVETLPDFKFHIAAITEMSDKLMQLDQYANVH
                     LYPSINIDRVNELYQLCDIYLDINEGNEILNAVEQAFDYELLILGYRQTAHHAKVTLS
                     EHLFEHNDEITMESKDQLIQMLESLKDQQQFRDALLAQKAHAHEISREQFEQVFKQAL
                     ES"
     gene            complement(4360..5868)
                     /gene="gtfA"
                     /locus_tag="O6Y56_001304"
     CDS             complement(4360..5868)
                     /gene="gtfA"
                     /locus_tag="O6Y56_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system glycosyltransferase GtfA"
                     /protein_id="HDB5574559.1"
                     /translation="MTIYNINFGIGWASSGVEYAQAYRAKLLRRTNQDTKFVFLDFIQ
                     SENIQTLTQNIGFEDQEVIWLYQYFSDISIAPTTYTLDDIERELGHDISFRERNGKIV
                     RLYFNGKSSFVTCYLQNEQKDIVDRAEFVINSMLVRKDFYSYTRIFSEYYAPADNKAK
                     LYMRQFYNEDGSIAYNEYIDGDSSIYVFEDAVLYNKTEFIAYFLQRLNLTRDDIVILD
                     RASDIGQAVLQHKGDSKVGVVIHADHYSNNMMSEQHILWNNYYEYQFSKAKYIDFFIT
                     ATDIQNHMVCRQFEQYQGYRPRVYTIPVGSIDALSYPTLSRKPYAMISASRLANEKHI
                     DWLVKAVIVAKRQVPKLTFDIYGEGSEKTRLRKIIDTHRAQDYIRLLGHVKLDEIYTD
                     YELFLSASTSEGFGLTLMEAVGSGLGMIGLNVNYGNPTFIRDGENGYLVPFDTDEDSV
                     DDVVAKLAHAIVMYFNDGPQTPHDISYEVAQQFMTQDIILKWETLVQEVLYD"
     gene            complement(5886..8276)
                     /gene="secA2"
                     /locus_tag="O6Y56_001305"
     CDS             complement(5886..8276)
                     /gene="secA2"
                     /locus_tag="O6Y56_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system translocase SecA2"
                     /protein_id="HDB5574560.1"
                     /translation="MKHKLDVTINELRLKSIRKIVKRINTWSDEVKSYSDDALKQKTI
                     EFKERLALGVDTLDTLLPEAYAVAREASWRVLGMYPKEVQLIGAIVLHEGNIAEMQTG
                     EGKTLTATMPLYLNALSGKGTYLITTNDYLAKRDFEEMQPLYEWLGLTSSLGFVDIVD
                     YEYQKGEKRNIYEHDIIYTTNGRLGFDYLIDNLADSAEGKFLPQLNYGIIDEVDSIIL
                     DAAQTPLVISGAPRLQSNLFHIVKEFVDTLIEDVHFKMKKTKKEIWLLNQGIEAAQSY
                     FNVEDLYSEQAMVLVRNINLALRAQYLFESNVDYFVYNGDIVLIDRITGRMLPGTKLQ
                     AGLHQAIEAKEGMEVSTDKSVMATITFQNLFKLFGSFSGMTATGKLGESEFFDLYSKI
                     VVQVPTDKAIQRIDEPDKVFRSVDEKNIAMIHDIVELHETGRPVLLITRTAEAAEYFS
                     KVLFQMDIPNNLLIAQNVAKEAQMIAEAGQIGSMTVATSMAGRGTDIKLGEGVEALGG
                     LAVIIHEHMENSRVDRQLRGRSGRQGDPGSSCIYISLDDYLVKRWSDSNLAENNQLYS
                     LDAQRLSQSSLFNRKVKQIVVKAQRISEEQGVKAREMANEFEKSISIQRDLVYEERNR
                     VLEIDDAENRDFKALAKDVFEMFVNEEKVLTKSRVVEYIYRNLSFQFNKDVACVNFKD
                     KQAVVTFLLEQFEKQVALNRKNMQSAYYYNIFVQKVFLKAIDSCWLEQVDYLQQLKAS
                     VNQRQNGQRNAIFEYHRVALDSFEVMTRNIKKRMVKNICQSMITFDKEGMPVIHFP"
     gene            complement(8266..9225)
                     /gene="asp3"
                     /locus_tag="O6Y56_001306"
     CDS             complement(8266..9225)
                     /gene="asp3"
                     /locus_tag="O6Y56_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp3"
                     /protein_id="HDB5574561.1"
                     /translation="MLKNKTFKVTWNYISQTTFMYGSKVSFSNGEVTFINPLMPSGLP
                     IHEWLMLKQFSKYKSAPSLPILRRGQHYKLHFDFDATPAGSVYFIIIFYNKNGTKLST
                     EIVKSNSITIQYPDEAYAYKIKMMNAASTSLIFRCLTITEMTHQDDLEYKSMRVTKIG
                     DDQYGNDRINVIIAEPSDAYPTISNDFLKPFGHVWLVERWMDDNIEGNIKQLKNDLQS
                     QDTIKAINLISYGSKSNVFATYVAQHLDCKVYRTSHEDDDLKDWFKEHVPGNHELKDT
                     NVEVYFKEEQDNHLNYMSRLMNPVRFLDYLDVSKLNGGEVNET"
     gene            complement(9203..10771)
                     /gene="asp2"
                     /locus_tag="O6Y56_001307"
     CDS             complement(9203..10771)
                     /gene="asp2"
                     /locus_tag="O6Y56_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp2"
                     /protein_id="HDB5574562.1"
                     /translation="MPRKFRVLQIGGDDLEPIFQHKKGVSWDYFDIGLFEFDSGYVEA
                     IEAIVEAEGRFDFIYIQAPYSETLTNLLRMISEPYNTYVDESFWSVEYEQDENVQKYV
                     VQPLHYRNIEERNNKLEAVSFSGQYGDKVSPKLALVHPNFKGDVVYQGNSELTLSGEF
                     GKEFKPIASWQNNLVYDKDKVIQIWPEFDIDGAVELQYTFRLIQTGADGALIEQIVLT
                     DDMLDSPLEIPTKPFDAYISVTVKARGNGTVHLGPIHKRWSRLDMGQFLLGGSRFVDS
                     QRQEFIYYFHPGDMKPPLNVYFSGYRTAEGFEGYYMMKRMNAPFLLIGDPRVEGGSFY
                     IGSSEYEQGIINVIDETLEKLNFKSHELILSGLSMGSFGALYYGAQLNPQAIIVGKPL
                     VNIGTIAEHMRLLRPEEFGTALDVLVSNEGDTSQASIQALNQKFWQTFQKKSLSQTVF
                     AIAYMQHDDYDPHAFQELLPVLTAHQARVMNRSIPGRHNDDSPTIASWFVNFYNIILE
                     DKFGRVQHAEKQNI"
     gene            complement(10761..12314)
                     /gene="asp1"
                     /locus_tag="O6Y56_001308"
     CDS             complement(10761..12314)
                     /gene="asp1"
                     /locus_tag="O6Y56_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp1"
                     /protein_id="HDB5574563.1"
                     /translation="MKYFIPAWYDDQRWWQDTTVPYYQMQNKTEFDDMISLMGMHLEN
                     NLDYQLIVLNHAPNIRTFLHRYDLYETKYWSVFDEIQGFSHHAPQAINYHHLKWPDDV
                     EFVYTPYLLKCVTSEQTYTNIYFSQEGYSIWFEEFERDQLQRRYIFDDRGYLSAIRYF
                     DNQGEASYQEYLTINGDCVLYENLKNGRVTVSKRYQHHYQQTEYNNMAQLIEEKFQAM
                     IAQQIHEDDHVIVASDARHNRQIANHIPAKLLSYSFFKNRNETVSDEEYQSIVKNAHL
                     IVDSVQLERDLISHQEKYQRENTMIRITPFETRQSPNISSQLMETFIGVWIDGMSDAD
                     LQQMMQRLVDYIAQEDNYRLILLTRHQNDIPMWLRECIASVNEEYQAKQNADVNVSAL
                     MTPEDQDDIIAVKTIHAEHDVVEALRTLRLVIDMSKEPDLYLQISAISAGIPQINGQQ
                     TDYVSDYDNGRIINTVDELDDALNYYLFYLKNWNYAYAYSLKLIDAYASKNIINQLDE
                     LIEGENDAT"
     gene            complement(12325..13536)
                     /gene="secY2"
                     /locus_tag="O6Y56_001309"
     CDS             complement(12325..13536)
                     /gene="secY2"
                     /locus_tag="O6Y56_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein translocase subunit
                     SecY2"
                     /protein_id="HDB5574564.1"
                     /translation="MLKLLQQYEYKIIYKRILYTCFILFIYILGTNISIVSYNDMQVK
                     HESFFKIAISNMGGDVNTLNIFTLGLGPWLTSMIILMLISYRNMDKYMKQTSLEKHYK
                     ERILTLILSVIQSYFVIHEYVSKQRVHQDNIYLTILILVTGTMLLVWLADKNSRYGIA
                     GPMPIVMVSIIKSMMHQKMEYIDASHIVIALLIILVIITLFILLFIELVEVRIPYIDL
                     MNVSATNMKSYLSWKVNPAGSITLMMSISAFVFLKSGIHFILSIFNKSISDDMPMLTF
                     DSPVGISVYLVIQMLLGYFLSRFLINTKQKSKDFLKSGNYFSGVKPGKDTERYLNYQA
                     RRVCWFGSALVTVIIGIPLYFTLFVPHLSTEIYFSVQLIVLVYISINIAETIRTYLYF
                     DKYKPFLNQYW"
     gene            complement(13665..20465)
                     /gene="sasA"
                     /locus_tag="O6Y56_001310"
     CDS             complement(13665..20465)
                     /gene="sasA"
                     /locus_tag="O6Y56_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-rich repeat glycoprotein adhesin SasA"
                     /protein_id="HDB5574565.1"
                     /translation="MSKRQKEFHDSLANEKTRVRLYKSGKNWVKSGIKEIEMFKIMGL
                     PFISHSIVSQDNQSISKKMTGYGLKTTAVIGGAFTVNMLHDQQAFAASDAPLTSELNT
                     QSETVGNQNSTTIDASTSTADSTSVTKNSSSVQTSNSDTVSSEKSENVTSTTNSTSNQ
                     QEKLTSTSESTSSKNTTSSSDTKSVASTSSTEQPINTSTNQSTASNNTSQSTTPSSAN
                     LNKTSTTSTSTAPVKLRTFSRLAMSTFASAATTTALTANTITVNKDNLKQYMTTSGNA
                     TYDQSTGIVTLTQDTYSQKGAITLGTRIDSNKSFHFSGKVNLGNKYEGHGNGGDGIGF
                     AFSPGVLGETGLNGAAVGIGGLSNAFGFKLDTYHNTSTPNSAAKAKADPSNVAGGGAF
                     GAFVTTDSYGVATTYTSSSTADNAAKLNVQPTNNTFQDFDINYNGDTKVMTVKYAGQT
                     WTRNISDWIAKSGTTNFSLSMTASTGGATNLQQVQFGTFEYTESAVTQVRYVDVTTGK
                     DIIPPKTYSGNVDQVVTIDNQQSALTAKGYNYTSVDSSYASTYNDTNKTVKMTNAGQS
                     VTYYFTDVKAPTVTVGNQTIEVGKTMNPIVLTTTDNGTGTVTNTVTGLPSGLSYDSAT
                     NSIIGTPTKIGQSTVTVVSTDQANNKSTTTFTINVVDTTAPAVTPIGDKSSEVFSPIS
                     PIKIATQDNSGNAVTNTVTGLPSGLTFDSTNNTISGTPTNIGTSTITIVSTDASGNKT
                     TTTFKYEVTRNSMSDSVSTSGSTQQSQSVSTSKADSQSASTSTSGSIMTSTSVSTSKS
                     TSTSLSDSVSASKSLSTSESNSESSSTSTSLVNSQSVSSSMSGSVSKSTSLSDSISNS
                     SSTEKSESLSTSTSDSLRTSTSLSDSVSMSTSGSLSKSQSLSTSTSDSASTSQSVSDS
                     TSNSISTSESLSESGSTSESISISNSISNSVSASTSKSDSQSTSISLSTSDSKSMSTS
                     ESLSDSTSTSDSVSGSLSVAGSQSVSTSTSDSMSTSEMISDSMSTSGSLAASDSKSMS
                     VSSSMSTSQSGSTSESLSDSISTSDSDSKSLSLSTSQSGSTSTSTSTSSSVRMSESQS
                     TSGSMSTSQSDSTSISTSFSDSTSDSKSASTASSESISQSVSTSTSGSVSTSTSLSTS
                     NSERTSTSMSDSTSLSTSESDSTSDSTSTSDSISEAISGSESTSISLSESNSTSDSES
                     KSASAFLSESLSVSTSESTSESVSSSTSASTSLSDSTSESGSTSTSLSNSTSGSASIS
                     TSTSNSESTSTFKSESVSTSLSTSTSTSLSDSTSLSTSLSDSTSDSKSDSLSTSMSTS
                     DSISTRKSESLSASTSLSGSTSESESGSTSSSESTSESTSMSLSVSQSTSGSTSLSTS
                     ESLSDSTSTSLSLSASMNQSGVDSNSASQSASTSTSTSTSESDSQSTSSYTSQSGSTS
                     ESTSTSTSLSDSTSISKSTSQSGSTSTSASLSGSESESDSQSISTSTSESKSESTSTS
                     LSDSTSTSNSGSASTSTSLSNSASISESDSSSTSLSDSKSASMQSSESDSQSTSTSLS
                     NSQSTSTSNRMSTIASESVSESTSESGSTSESTSESDSTSTSLSNSQSTSRSTSASGS
                     ASTSTSTSDSRSTSASTSTSMRTSTLDSQSMSLSTSTSTSVSDSTSLSDSVSDSTSDS
                     TSTSTSGSMSASISLSDSTSTSTSASEVMSASISDSQSMSESVNDSESVSESNSESDS
                     KSMSGSTSVSDSGSLSVSTSLRKSESVSESSSLSGSQSMSDSVSTSDSSSLSVSTSLR
                     SSESVSESDSLSDSKSTSGSTSTSTSGSLSTSTSLSGSESVSESSSLSDSMSMSDSTS
                     TSDSDSLSGSISLSGSTSLSTSDSLSDSKSLSSSQSMSGSESTSTSVSDSQSSSTSNS
                     QFDSMSISASESDSMSTSDSSSISGSNSTSTSLSTSDSMSGSVSVSTSTSLSDSISGS
                     ISVSDSSSTSTSESLSDSMAQSQSTSTSASGSLSTSISSSMSASASTSKSQSTSVSTS
                     LSTSDSISDSTSISISGSQSAVESESTSDSTSISDSESLSTSGSTSGSTSTSTSESLS
                     TSGSGSTSVSESLSTSGSGSTSVSDSSSTSSSLSTSGSTSVSDSTSMSDSESVSTSAS
                     TSLSTSNSESASVSISDSTSSSMSNSMSMSTSESNSIHPSNSMSTSQTHFTSTSISTS
                     ESIAPNTNESQSTLSATSVSSKHDAEPAQREERLPDTGDSIKQNGLLGGVMTLLVGLG
                     LMKRKKKKDENDQDDSQA"
BASE COUNT         6090 a         3966 c         3250 g         7474 t
ORIGIN      
        1 tcattttata taaatatatt attttatgtt caaatgttcc tcatcatatc cgtttcaatt
       61 gccatctcac acattttata aatatgagca aatgtactta ttctcaaaca ttactgccga
      121 gctttaattg acgttatatt aactataaac tacttttcca tgactctacg gattcaatgt
      181 cacatgagcg tgataaaatt tgttcaataa taaagtcatg tttatcatct gatctatcac
      241 caacagcatc ttctaaaaca gtaatataat agtctttatc tacactttct aatgccgtgc
      301 tcaatacagc tccacttgta gagacacccg ttaatactaa atgattaata tcatttgcac
      361 gtaaataaac ttccaagtaa ctacctgtaa atgcgctaaa gcgtcgctta gaaataatcg
      421 gctcatcttc tagtggtgct aagtcttcaa gtattcgtgt agatgcatct gcttcagtaa
      481 tcgcatatcc ttgagcttta attgttgaaa acactttatt actcgaggag acatcattaa
      541 aatgcttatc taacactaaa cgtatgaaaa tgactggtat tcgatgttgt cttgctgctt
      601 caattgctct ctgattcgct ttaataatat tttttattct aggtacacta ctcgctatac
      661 cttcttgcat atccaaaact aatagcgccg tttttcgaga catcttcatt ctcctttact
      721 tgtgtagttc taagtcgtta aattcattat aacgttaaaa tgatggacaa tctattcatt
      781 gcattttgca tatacttcac aataatttaa gggggaaata agacgtctta tatacttaaa
      841 aaaatatata gatgctcttc ccccaatata attatgcttt atttttcaac ttattgcgtc
      901 gtgataacca aatcattagt acacccattg caccaacaat tacagatatc ggcaaccaat
      961 gttcttttat cgtttccccc gctttaggca aagatacatt accatcagca tttaataatc
     1021 cacttaacaa tccattacct ttaccaagtg ttaacgtctt ttctggcttt ggtgtgggta
     1081 tatctggaat actgtctaat aaatttgatc cttgattcat taaacttgct aacttattta
     1141 aatctgttgt tttcccattt ttattcaatc tatctagtaa acttggacga tttactattg
     1201 gtgataaaac atagtctata tctttttttg tttgattgag tctcttttgt aaattcaata
     1261 aatcatccgc tttaccattc aatgccgatt taactaaatt aaaaatttta ttttgatctg
     1321 tttctatttt agtaattaaa tctgccagta attttgcctt ttgtctttct atacgtgttg
     1381 ctaaaatcgt ttcaattgct tgttttttat ctttggcatt attcaaaatt gcttttaata
     1441 tatcatctga agacgtgtcg ccagttgatg caaaatgttt cttcaattgg tcaacgattt
     1501 ggcgatttga taatccttta ttcgtccaat ctttagccaa tttatctgct tcagattttc
     1561 ctaatttcgt ttgtaaaatt tgagaaatca atagcgactt atcttgtgat tgatcaatca
     1621 atgacgttaa taaatcatca ctcgttgtca gagatagttg atcaatatga cgagtaattt
     1681 gatctgcaat ttgttgatct gttttaccat caacacgtat atcttttaga attttatctg
     1741 cctcgtcttt attaaatata ctttctaaaa tgttttgtgt agcatgcttt ttatcatcag
     1801 tacgtgcaag ttcttccaaa ataatatttc gttgactttt tatacgctct ttcgtcttat
     1861 ttacttcgct cattaagtct gatttttgat ttttaggaag ttgcgtattt gcaatacgtt
     1921 gatctaaaga ttgtaatgta ttcagtttat gatatgtgta atgatgcgtt gaggcattac
     1981 ttttagccaa tttttcaatc atagcatgat taattttatc gcttccttgt aatttatcag
     2041 tgagtcgatt actatggctt tgattctctt catttgaaag aaatttattt aacacaacat
     2101 gtccagaacc atcattattt ggcgttttag ctacttcatt tttattatct gttgtagaca
     2161 ctgctgtatc tttcgatgca tctttcgatt tgtgtatttg ctgattcaat tggtctaagt
     2221 cttctaacgc cttatttacc attgcttcat catttttatc atctttttct ccatgttttg
     2281 ttgtagccgt ttgtgacata tcatttttca ttgcattaag atcatcctcg ccactttgtt
     2341 gacccctatc aacctttgaa gaaacctcat ttaaatcttt aagcaattga tctaatttac
     2401 tgtctatatc actttgaccg ttcatctcaa tgtgagaacc tttattgtct ttgctatcca
     2461 actcattagc tcgttttatg atttcatcta tttgcgatgc tgttttcgct tcatttagtt
     2521 gtgctttata atgtgcttta gatgaagccg ataactgttt taattgctca atttgacgat
     2581 ttgctttgtc aactttgtct aataaatctt gcttagataa tatctctttt gaaatttcag
     2641 tatcattttc agatgcagct tgggcatcgt acggcaagat attcgttaaa atgatactag
     2701 tcgccatcat tgtcgaacac gataacttta catataattg aaacggtttc cctcgatatt
     2761 tagccatcaa catactcctt tctcacttac ttccttaaaa gaattacata ctattatata
     2821 cctgtttaca agaaatttac acttatctat ctagttattg ttgttagtaa ttatccactt
     2881 attacttagc ttatatttaa gtaaaccaaa aaagcatgac gtaatatcat attgtccatg
     2941 tcgctaacat catattacgt caaatctttt atattaaatg atgctttatt ttagactgct
     3001 ttttcttttt agctttcgag cgcctgttta aaaacttgct cgaattgttc acgcgagatt
     3061 tcgtgtgcat gtgctttttg tgctaataaa gcatctcgaa actgttgttg atctttcaaa
     3121 ctttctaaca tttgtattaa ttggtcttta ctttccattg ttatctcatc attatgctca
     3181 aataagtgct ctgatagtgt tactttagca tggtgtgctg tttgacgata acctaaaatc
     3241 aacaactcat agtcaaacgc ttgttccacc gcatttaaaa tttcattacc ctcattgata
     3301 tcaagataaa tatcacataa ctggtatagt tcatttaccc tgtctatatt aatagatggg
     3361 tataagtgca cattagcata ttgatcaagt tgcattagct tatcagacat ctctgtaata
     3421 gcagcgatgt gaaacttaaa atctggtaaa gtttcaacca ataccttgat gttacgaagt
     3481 tgatccgagt tagttaatat tacaatttct ttagtatatc tattacgact acgataatta
     3541 tatagatatc cgccttgtaa aatacgagat tgaacctttg cgtctgctat attgagcatc
     3601 gtttcatatt cgtttttatc tggaataata atattacaat gtcgtttcat atcaccttta
     3661 cacatcaatt gcatatttcc tgggacatta ccatcgcact gttcttgcca taccaaaaca
     3721 tcactaccat ttgatggcaa attatataac actgaaaatg gtagggctag tgagttaata
     3781 acgaaatgat gttccgtaat ttcaagttgc ttgataaaaa ataatacgaa tgcgagcttt
     3841 gaagggaaaa agtaagactt cccttgccaa tctaatatga catcagatgt tacaaaattt
     3901 tcataaatca cttctttacc ctctgctgtc atatatttct tcaagatcgc tttacgattt
     3961 aaatcgtaaa cagtttgtgc aaatttaata ccattcttag aataataatc gacaaatcgg
     4021 acacgttgtt ggtcatcaaa ccattcgaca cgactaacaa ttctagggcg ctctccactt
     4081 tgataaaata ttttgcctcg tagacgtccc atatcattaa ttgtagccga attgttgtta
     4141 cctttaattt cccaaaaagc tggtacagta acctgattaa aaaatcgtgg tttcatattt
     4201 tctgtattat gattatctgc aaaaaattga tacggtgata taacatcgtc cggtaaaaag
     4261 ccattgtcat tgagtacaat tgttaaatct tcttccaact tactggcttt aaaagactca
     4321 tataactttc gtgaatgatc gttaaagtaa tcaaataatt taatcataca gcacctcttg
     4381 aactaatgtt tcccatttta aaataatatc ttgagtcata aattgctgtg ccacttcata
     4441 agagatgtca tgtggtgtct gaggaccatc gttaaaatac attacaatgg catgagctag
     4501 ttttgcgaca acatcatcca cactatcttc atcggtatca aaaggtacca agtagccatt
     4561 ttccccatct cgaataaagg ttgggttacc ataattcaca tttaatccaa tcatacctag
     4621 tcctgagcct accgcttcca ttagtgttaa tccaaaacct tcgctagttg atgcagaaag
     4681 aaataactca taatcagtat aaatttcatc aagtttaaca tgccctagta aacgaatata
     4741 atcttgcgcg cggtgtgtat caataatttt acgcagtcgc gtcttctcgc taccttctcc
     4801 ataaatatca aatgttaatt ttggcacttg tcgtttagcc acgataactg ctttgacaag
     4861 ccaatcaata tgtttctcat ttgctaaacg agatgcacta atcatcgcat atggctttct
     4921 tgataatgtt ggatatgata atgcatcaat gcttcccaca ggaatagtat aaacacgtgg
     4981 gcgataacct tgatattgct caaattgtcg acaaaccata tgattttgaa tatctgttgc
     5041 tgtaataaag aaatcaatgt atttagcttt tgaaaattga tattcataat aattgttcca
     5101 tagtatatgc tgctcactca tcatattatt actataatga tcagcatgaa tcacaacacc
     5161 aactttacta tcacctttat gctgcaaaac agcctgacca atatcagaag cgcggtctaa
     5221 tatgacaata tcgtctcggg ttaaattcaa tcgttgtaaa aagtatgcaa taaattccgt
     5281 tttgttatac aacaccgcat cttcaaacac atatatagag ctgtctccat caatatattc
     5341 gttataagcg atggaaccat cttcattata gaattgtcgc atatataatt tcgctttatt
     5401 atcagctggt gcataatact cagaaaatat gcgtgtataa ctataaaaat ctttacgtac
     5461 taacatacta ttaattacaa attctgcacg atccacaatg tctttttgct cattttgcag
     5521 ataacatgtt acaaatgatg atttcccatt aaaatatagg cggactatct taccatttct
     5581 ttctctaaaa ctaatatcat gaccaagctc acgttcaatg tcatctaacg tgtacgttgt
     5641 tggtgctata gaaatatcac taaaatactg atacaaccaa ataacttctt gatcttcaaa
     5701 cccaatgttt tgcgttaatg tctgtatgtt ctctgactgt ataaaatcta aaaacacaaa
     5761 tttagtgtct tgatttgtac gtctcaataa tttagcacgg taagcttgtg catattcaac
     5821 accgctactc gcccagccta taccaaagtt tatattatat attgtcatgc gctacccctt
     5881 ttcatttatg gaaaatgtat aactggcata ccctctttat caaatgtaat catgctttga
     5941 caaatatttt tcaccattct ttttttgata tttcgtgtca taacttcaaa tgaatctaat
     6001 gcaactctat ggtattcaaa aatagcgtta cgttgcccat tttgtcgttg attaacgctt
     6061 gcttttaatt gttgtaaata gtcgacttgt tctaaccaac atgaatcaat tgctttcaaa
     6121 aagacttttt gaacgaaaat attataataa tatgcacttt gcatgttttt acgattcaaa
     6181 gctacttgct tttcaaattg ctctaataaa aatgtcacta ctgcttgctt atctttaaaa
     6241 ttaacacaag ccacatcttt attaaattgg aaacttaaat ttcgataaat atactcgaca
     6301 acacgcgatt ttgttagcac cttttcctca tttacaaaca tttcaaatac atctttagct
     6361 aacgctttaa aatctcgatt ctcagcatca tctatttcta aaactcgatt gcgttcctcg
     6421 tatacaagat ctcgctgtat actaatgctt ttttcaaatt cattagccat ttcacgagct
     6481 ttaacccctt gttcttccga gatacgctgc gctttaacta caatttgctt aactttgcga
     6541 ttaaacaaac tactttgcga taatcgttgt gcatctaatg aatataattg attattttcc
     6601 gctaaattac tatcgctcca tcgcttaact aaataatcat ctagtgaaat atatatacaa
     6661 gatgatcctg gatccccttg tctaccagaa cggccacgta attgcctgtc tacacggcta
     6721 ttttccatat gttcatgaat aataacagct aatccaccta atgcttcgac accttcacca
     6781 agtttaatat ctgtgcctcg acctgccata ctagtcgcaa cagtcatgga accaatttgc
     6841 cctgcttcag ctatcatctg cgcttctttt gcaacatttt gcgcaatgag taaattatta
     6901 ggaatatcca tttggaataa tactttcgaa aagtattcag ccgcttcagc agttctcgtt
     6961 atgagtaaaa ccggtcgccc cgtttcatga agttcaacta tatcatgaat catcgcgatg
     7021 tttttctcat caactgaacg aaacacttta tctggttcat cgatacgttg aatcgcttta
     7081 tcagttggta cttgtacgac tatttttgaa tacaaatcaa agaactctga ttcgcctaat
     7141 tttcctgtag ctgtcatacc tgaaaatgat ccaaaaagtt taaataaatt ctggaaggta
     7201 attgttgcca taacactttt atctgttgaa acctccatac cttctttcgc ttcaatagct
     7261 tggtgaagtc cagcttgcaa cttagttccc ggtaacatac gacctgtaat acggtcaatt
     7321 aaaacaatat caccattata tacgaaataa tcgacattag attcaaacaa atattgcgcg
     7381 cgcagtgcta gattaatatt acgcactaag accatcgctt gttcgctata taaatcttca
     7441 acattaaagt atgattgtgc cgcttcaata ccttgattta acagccatat ttcttttttg
     7501 gtcttcttca ttttaaaatg cacgtcttca atcaatgtat ctacaaactc tttcacaata
     7561 tgaaatagat ttgattgtaa tcttggtgca cccgaaataa ctaatggtgt ttgagcagca
     7621 tctaaaatga ttgagtccac ttcatcaata ataccgtaat ttaattgtgg taaaaatttt
     7681 ccttccgcac tatctgccaa attatcaatt aaataatcaa aaccgagacg tccattagtt
     7741 gtatatataa tatcatgttc atatatatta cgtttttccc ctttttgata ctcataatcc
     7801 acaatatcaa caaaacctaa tgaagaagtt aaacctaacc attcatataa tggttgcatc
     7861 tcttcaaaat cacgcttcgc taaataatca ttcgttgtaa ttaaatatgt tccttttccc
     7921 gaaagtgcat ttaaatataa aggcatcgtt gctgttaatg ttttaccttc gcctgtttgc
     7981 atctccgcaa tgttaccttc atgcaataca atcgctccga ttaactgaac ttctttagga
     8041 tacataccta atactctcca gctcgcttca cgtgccactg cataagcttc aggtaacaat
     8101 gtgtctagtg tatcaactcc taatgctaaa cgttctttaa attctattgt cttttgtttt
     8161 aacgcatcat cagaatatga tttaacttca tcgctccatg tattgatgcg tttcactatt
     8221 tttctaatcg actttagtct taattcgttt atcgtaacat ctagtttatg tttcatttac
     8281 ttccccacca ttcagtttcg atacatctaa gtaatctaaa aatcgtactg gattcattaa
     8341 acgtgacata taatttagat ggttgtcttg ctcttcttta aaataaacct cgacatttgt
     8401 atcttttagt tcatgatttc ctgggacatg ttctttaaac caatctttta aatcatcatc
     8461 ttcatggctt gtacgataca ctttgcaatc taaatgctga gcgacataag ttgcaaaaac
     8521 atttgacttt gacccataac taatcaagtt aatagccttt atggtatctt gactttgcaa
     8581 atcattcttt agttgcttaa tatttccctc gatattgtcg tccatccaac gttcaacgag
     8641 ccaaacatga ccaaacggtt tcaaaaaatc attcgaaata gttggatagg cgtcagatgg
     8701 ttctgcaata atgacattga tcctatcatt tccatattgg tcatcgccta tcttcgtcac
     8761 ccgcatgctt ttatactcta aatcatcttg atgcgtcatc tctgtaattg ttaaacatct
     8821 aaatataaga ctcgtcgatg ctgcattcat catttttatt ttataagcat aggcttcatc
     8881 aggatattga atcgtaatac tatttgactt tacaatctca gtacttagtt ttgtgccatt
     8941 tttattataa aaaatgatga taaaatacac tgaaccagca ggcgttgcat caaaatcaaa
     9001 atgcaattta taatgctgtc ctctacgcaa aattggtaaa cttggcgcac ttttatattt
     9061 tgaaaattgt tttaacatca accactcatg aatcggtaat ccagagggca tcaaaggatt
     9121 tataaaagtc acttcaccat ttgaaaatga tacttttgag ccatacataa atgtagtttg
     9181 tgaaatataa ttccaagtaa ctttaaatgt tttgtttttc agcatgttga actctcccaa
     9241 acttgtcttc caaaataatg ttgtaaaaat taacaaacca acttgcaatg gtaggtgaat
     9301 catcattatg tcgcccagga atactgcgat tcatcactct tgcttggtgt gctgtcaata
     9361 caggtagtag ctcttgaaat gcatgtggat cataatcatc atgttgcata tatgctatgg
     9421 caaaaacagt ttgtgacaat gatttctttt ggaatgtttg ccaaaatttt tgatttaatg
     9481 cctgtatcga cgcttgagat gtatcacctt cattagacac caggacgtct aatgctgtac
     9541 cgaactcttc tggtctaagt aatcgcatat gttcagcaat cgttccaata ttaacaagtg
     9601 gtttaccaac aataattgcc tgaggattta actgagcacc ataatacaag gcaccaaatg
     9661 aacccataga taaaccagat aatattaatt catgtgattt aaaattcagc ttttctaatg
     9721 tctcgtcaat aacattgata ataccttgtt catattcaga tgaaccgata taaaagctac
     9781 caccttcaac acgaggatcg ccgataagta aaaacggtgc attcatacgt ttcatcatat
     9841 aatatccttc gaaaccttcc gctgttcgat aaccactaaa atatacgttt agtggtggtt
     9901 tcatatcacc agggtggaaa taataaataa attcctgtcg ttgactatct acgaaacgac
     9961 taccaccgag taaaaattga cccatgtcta atctagacca tcgtttgtgt ataggtccta
    10021 aatgtaccgt cccgttccca cgcgccttaa cagttacact tatataagca tcaaatggtt
    10081 tcgtaggtat ctctaaagga ctgtctaaca tatcatcagt caatacgatt tgttcaatta
    10141 atgcaccatc agcgccagtc tgaatcaatc taaatgtata ttgcaactcg accgcaccat
    10201 caatatcaaa ttctggccat atttgaataa ctttatcttt atcgtaaacg agattatttt
    10261 gccaagatgc gataggttta aattcttttc caaattctcc actcaacgtg agctctgaat
    10321 taccttggta aacgacatct cctttaaaat tcggatgaac aagtgctaac ttaggagaaa
    10381 ccttatctcc atactgtcct gagaagctaa ctgcctctaa tttattatta cgttcttcaa
    10441 tgttccggta atgtaatggt tgaacaacgt atttttggac attttcgtct tgttcatatt
    10501 caactgacca aaatgattca tcaacatacg tattgtatgg ttcgcttatc attcgtaata
    10561 aattcgttaa tgtctccgag tatggtgctt gaatatagat aaaatcaaag cgcccttctg
    10621 cttcaacaat cgcttcaata gcctctacat aaccactatc aaattcaaac aatccaatat
    10681 cgaagtaatc ccaactcaca ccttttttgt gttggaaaat aggttctaaa tcgtctcctc
    10741 caatttgcaa aactctaaat ttacgtggca tcattttcac cttctattaa ctcatcgagc
    10801 tgattaataa tattcttaga agcatatgca tctattaatt ttaaagaata ggcgtacgca
    10861 taattccaat ttttcaaata aaacaaataa taatttaacg catcatctaa ttcatcaact
    10921 gtatttataa tacggccatt gtcataatca gagacgtaat ctgtttgttg accattaatt
    10981 tgtggaatcc cagcgctaat tgcactaatt tgtaaataca aatcaggttc ttttgacata
    11041 tctatcacaa gtcgcaacgt ccgcaatgct tctacaacat catgttcagc atgtatcgtc
    11101 ttaacagcaa tgatgtcatc ttgatcttca ggtgtcatta atgctgaaac attaacatcc
    11161 gcattctgtt tagcttggta ttcctcattt accgacgcaa tacattcacg aagccacatc
    11221 ggtatgtcat tttgatggcg cgttaataaa attaaacggt aattatcttc ttgtgcgata
    11281 taatccacaa gtcgttgcat catttgttgc aaatcagcgt cactcatacc atctatccat
    11341 acacctataa atgtttccat caattgacta cttatattag gtgattgtct cgtttcaaat
    11401 ggcgtgattc gaatcattgt attctctcgc tgatacttct cttgatgact aattaaatca
    11461 cgttctagtt gcacactatc aacaattaaa tgggcattct ttacgataga ttgatattcc
    11521 tcatctgaca cagtttcatt tctattttta aaaaatgaat aacttaataa tttcgccgga
    11581 atatgattgg ctatttgtcg attgtgccta gcatctgaag ccacaatcac atgatcatct
    11641 tcatgtattt gttgtgcaat cattgcttga aatttttctt caattagttg agccatattg
    11701 ttatattctg tttgttgata gtgatgttga tatctttttg aaacagtgac tcgtccattt
    11761 tttaagtttt cataaagcac acaatctcca ttaatcgtta aatattcttg gtaagaagcc
    11821 tctccctgat tatcaaaata acgtatagct gataaataac ctctgtcatc aaaaatataa
    11881 cgccgttgta actgatctct ttcaaattct tcaaaccaaa ttgaatatcc ttcttgacta
    11941 aaataaatat ttgtataggt ctgttcactc gtcacacatt ttaataaata cggcgtgtac
    12001 acaaactcaa catcatccgg ccattttaag tgatgataat taatcgcttg tggcgcatgg
    12061 tgactgaatc cttgaatttc atcaaacaca gaccaatact ttgtttcata caaatcatat
    12121 cgatgtaaaa atgttcttat attcggcgca tgattgagaa caatcagttg ataatctaaa
    12181 ttattttcaa ggtgcatccc cattaaacta atcatatcgt caaattccgt cttattttgc
    12241 atctgataat acggcacagt cgtgtcttgc caccatcgtt ggtcatcgta ccaagctgga
    12301 ataaagtatt tcataattac ctccttacca atactggttt aaaaatggct tatatttatc
    12361 aaaatataaa tatgtacgaa ttgtttctgc aatattaata ctgatgtaaa ctaatacaat
    12421 cagttgtact gagaaataaa tttcagtaga taaatgcggt acaaacaatg tgaaataaag
    12481 cggtatacca ataatgactg taactaatgc cgatccaaac caacatacgc gtcttgcttg
    12541 ataatttaaa taacgttctg tatccttacc aggtttaact cctgaaaaat aattgccact
    12601 tttcaagaag tcttttgatt tttgttttgt atttattaaa aatctcgata aaaaataacc
    12661 caataacatt tgaatcacta aatatactga aatacctact ggactatcaa acgtcagcat
    12721 tggcatgtca tctgatatgc ttttattaaa aattgataaa ataaaatgaa tgccactttt
    12781 taagaaaaca aaagctgaaa tgctcatcat taatgtaata ctgcctgcag gattaacctt
    12841 ccaagacaaa taagatttca tatttgtagc cgagacattc atcaaatcaa tatacggaat
    12901 tctaacttct actaattcaa tgaataatag gataaacaat gtgattatca caaggatgat
    12961 taacaacgca atcacaatat gacttgcatc tatatattcc attttttgat gcatcattga
    13021 tttaataatg ctaaccatta caatcggcat tggtcctgcg atgccgtaac gactattttt
    13081 gtcagctaac caaactaata acatcgttcc agtaaccaaa atcaatattg ttaagtaaat
    13141 attgtcttga tgaacacgtt gtttcgaaac atattcatga atcacaaaat aactttgaat
    13201 aacacttaaa atcaatgtta agatgcgctc tttataatgc ttctcaagac ttgtttgttt
    13261 catgtattta tccatattcc gataagaaat cagcatcaag ataatcattg atgttagcca
    13321 cggacctaat cccaaagtaa aaatgtttaa agtattaacg tctccaccca tattagaaat
    13381 agctatttta aaaaacgact catgttttac ttgcatatcg ttatacgaaa cgatagaaat
    13441 atttgtacct aatatataaa taaacaagat aaaacatgtg taaagtatac gtttatatat
    13501 aattttatat tcgtattgtt gtaaaagttt taacatgtta cacctctttt atatcaaaaa
    13561 cattaaaaag actaaggata tttcactaat tattaaaatc tgatatagat tttttagtga
    13621 acaacgcccc agtcttttta attttagcca gctataaatt caatttatgc ttgagaatca
    13681 tcttgatcat tttcatcttt ctttttcttt ctcttcatta aacctaaacc aactaataat
    13741 gtcataacgc cacctagtaa tccattttgt tttattgagt cacctgtatc tggcaatctt
    13801 tcttcacgtt gcgcaggttc agcatcatgt tttgatgata cagatgtcgc acttaatgtt
    13861 gactgagatt catttgtatt tggtgctatg gactcacttg ttgaaataga tgtgctcgtg
    13921 aaatgagtct gactcgtact catcgaattt gacggatgta ttgagttaga ttctgatgta
    13981 ctcattgaca ttgagttaga catacttgat gatgttgagt cgcttattga aactgacgca
    14041 ctttccgaat tagacgtact taatgacgtt gatgcgcttg ttgacactga ttctgagtca
    14101 ctcattgatg ttgagtcaga tacactcgtt gaaccagatg tacttaagga actagacgta
    14161 ctcgatgagt cagatacgct cgttgaacct gaacctgacg tacttaatga ttcggatacg
    14221 ctcgttgaac ctgaacctga cgtacttaat gattctgatg tgcttgttga agttgaacca
    14281 cttgttgagc cagatgtact caatgattct gagtcactga tagaagttga atcacttgta
    14341 gattctgatt ctacagcact ttgtgaacca ctgatactta ttgaagtcga atcacttata
    14401 ctgtctgatg ttgataatga cgtcgacacc gacgtgcttt gtgatttcga tgtacttgca
    14461 cttgctgaca ttgatgatga tatcgatgtg cttaacgaac ctgatgcgct tgtgcttgtt
    14521 gactggcttt gtgccataga atcacttagc gactctgatg tactcgttga gctcgagtca
    14581 cttacactta ttgaacctga tattgagtca cttaaacttg tcgatgttga aactgatacg
    14641 cttccgctca ttgaatcaga tgttgaaagt gatgtactcg ttgaatttga tccactgatg
    14701 ctagacgaat cgcttgtaga cattgagtca ctttctgatg cactgatgct catagagtca
    14761 aattgactat tacttgttga gcttgactgc gaatcgctca cacttgttga cgttgattct
    14821 gatccactca tactttgcga gctactcaat gattttgaat cacttaatga atcagaagtg
    14881 ctaagacttg tggaaccact taaagatatt gatccactta atgagtcgga gtcacttgta
    14941 ctagtagaat cactcattga cattgaatca cttagcgagc tagactcgct tacactttct
    15001 gaaccactta atgatgtcga agtgctcaat gaacctgatg tacttgttga agtcgaacca
    15061 cttgttgatt ttgaatcact taatgaatca gattcactca cgctttctga acttcttagt
    15121 gacgtcgata cacttaatga tgacgaatcg cttgtgctta ctgaatcact catcgattgt
    15181 gagccactca atgaactaga ctcgcttaca ctttctgatt ttcttaatga cgttgagacg
    15241 ctcaatgagc cagaatcact tacgcttgtt gaaccactca tcgattttga gtcactttca
    15301 gaattagatt cacttacact ttctgaatca tttacagatt ctgacatact ttgtgaatca
    15361 gatatgcttg cgctcattac ttcactagcc gatgttgatg tgcttgtcga atcacttaac
    15421 gatatagacg cactcatcga accagatgta ctcgtacttg ttgagtctga tgttgaatca
    15481 ctcacactat cagataatga cgttgaatca ctcacacttg ttgatgtact tgttgaaagc
    15541 gacatacttt gtgaatcaag cgtacttgta cgcatcgaag tactagttga agctgatgta
    15601 ctacgagagt cacttgttga tgttgatgta cttgccgatc cagatgcact tgtacttctt
    15661 gatgtgcttt gtgaattgct taatgatgtt gatgttgaat cggattcact tgtactttct
    15721 gatgttgagc cagattctga tgtactttcc gatactgact cacttgcaat agtagacatt
    15781 cggtttgatg ttgatgtgct ttgtgaatta cttaatgatg ttgatgtgct ttgtgaatcg
    15841 gattcactgc tttgcattga cgctgacttt gaatcactta atgatgttga cgacgaatcg
    15901 gattcactaa tgctcgctga gttactgagc gatgttgacg tacttgctga tcctgagttg
    15961 cttgtacttg ttgagtcact gagcgatgtt gatgtacttt ctgattttga ctcacttgtg
    16021 cttgttgata tactctgtga atcggattcg ctttctgaac cacttaatga tgcagatgtg
    16081 cttgttgaac ctgattggct tgtactttta gatatacttg ttgaatcgct tagtgacgtt
    16141 gatgtcgatg tggattcact tgtgctgcca gactgacttg tatatgatga tgtgctttgt
    16201 gaatcggatt cgctcgtgct tgtacttgtt gaggttgagg cactttggct tgctgagttt
    16261 gagtctacac cactttgatt cattgaggca ctcagtgaca atgatgtact cgttgagtca
    16321 gacaaacttt ctgatgttga caaacttgta cttcctgatg ttgattggga cacgctcagg
    16381 ctcattgatg ttgattcgga tgtactttca cttgatgatg ttgagccgga ttcactctca
    16441 ctcgttgaac cgcttaatga tgtcgatgca cttaatgact ctgattttct tgtactgatt
    16501 gaatcacttg tcgacattga tgtacttaat gaatcagact tactatcact tgtggaatca
    16561 cttaatgatg ttgacaaact tgtagagtca gacaaacttg tactcgttga cgtactcagt
    16621 gatgttgaaa cactctcgct cttaaacgtt gacgttgatt cactgttact tgtcgatgtt
    16681 gaaatggacg cactaccact tgttgaatta cttaatgatg ttgaagtgct accagattct
    16741 gatgtactgt ctgataatga cgtactcgca cttgtcgaac tactcactga ctctgatgtt
    16801 gattcagacg tacttacact taatgattca cttaaaaaag cagatgcact tttcgactct
    16861 gaatcacttg tactatttga ttcacttaat gatatagacg tactctctga accagatatc
    16921 gcttcactga tagaatcgct cgtcgacgtt gagtcgctcg ttgaatcaga ctctgatgta
    16981 cttaagcttg tggaatcact catagatgtt gatgtgcgtt ctgaattact tgtacttaac
    17041 gatgtcgaag tacttaccga accagatgta cttgttgata cactttgtga tattgattca
    17101 cttgatgcag ttgaagctga tttgctatca ctcgttgaat cactaaacga cgttgatatg
    17161 cttgttgaat cggattgact tgtgctcatt gaaccagatg tactttgtga ttccgacata
    17221 cgtactgaac tacttgttga tgttgatgtg cttgttgagc cagactgact tgtactcaat
    17281 gataatgact tactgtcaga atccgatgta cttatcgaat cacttaatga ttctgatgta
    17341 ctacctgact gagacgtgct cattgaacta cttacagaca ttgatttact gtctgatgca
    17401 gctaatgatc cacttgtact catagaatcg cttatcattt cagacgtgct cattgagtct
    17461 gatgtgcttg ttgagacact ttgtgacccc gctacactta atgatccaga tactgaatca
    17521 cttgtgctcg ttgaatcgct taatgactct gatgtactca tcgatttaga atcgcttgta
    17581 cttaatgata ttgatgtact ttgtgaatct gatttgcttg ttgatgcact cactgaattc
    17641 gaaatgctat tagaaatact tatagattct gatgtactac ctgactcact taatgattct
    17701 gatgtactaa ttgaatttga tgtactatca cttaccgatt gtgatgtact agccgaatct
    17761 gatgtgcttg ttgataagct ttgtgactta gacaagcttc ctgatgtact catgcttact
    17821 gaatcactta acgatgttga tgtacgcaat gaatcagatg tacttgttga tagactttcg
    17881 gatttttcag tactgctaga gttcgaaata gaatcgctta atgatgttga tttactaact
    17941 gaacctgaca tgcttgatga tacactttgt gaatttacta aacttgtgct tgttgagctt
    18001 gattcactat tactttcaga tgtacttaat gacttagatg cactcactga atcagataaa
    18061 cttgtacttg ttgatttcga agtactaact gatgttgaag tcattattga accagatgtg
    18121 ctcgtagaag cactttgtga gtcagcttta cttgttgaca cactttgtga ttgttgggta
    18181 cttcccgatg ttgatacgga atcactcata ctatttcttg ttacttcata tttaaaagtg
    18241 gttgtcgttt tgttaccact cgcatctgtg gaaacgattg taatagtact tgtaccaatg
    18301 tttgttggtg taccactaat agtattattt gtgctgtcga atgttaatcc agacggcaat
    18361 cctgtgactg tatttgttac tgcattacca ctattgtcct gcgtagcaat tttaatcggt
    18421 gatattggag aaaaaacttc tgatgattta tctcctattg gcgtcactgc tggtgctgtc
    18481 gtatccacaa catttattgt aaaagttgtc gtcgatttgt tatttgcttg gtcagtagat
    18541 actactgtca ctgttgattg accaattttt gttggtgtcc caatgattga attcgttgca
    18601 ctatcataac ttaatccgct tggtaatcct gtaactgtat ttgtcacagt ccctgtacca
    18661 ttatccgttg tagtcaacac aataggattc attgttttac ccacttcaat ggtttgattg
    18721 cctacagtta cagttggtgc ttttacatca gtaaaataat atgtcactga ttgtccagca
    18781 ttcgtcattt ttacagtttt atttgtatca ttataagttg atgcatatga actatcgaca
    18841 gatgtgtagt tatatccttt agcagtcaat gcagattgtt gattatcgat tgtcacgact
    18901 tgatcaacat ttcctgaata tgtttttggg ggaataatat ctttacctgt tgttacatca
    18961 acgtatctca cttgtgtaac agcagattct gtatattcga atgttccaaa ttgtacttgt
    19021 tgtaaatttg tcgcaccacc tgttgaggct gtcattgata atgaaaagtt ggtcgtacca
    19081 cttttcgcaa tccaatctga aatattacgt gtccatgttt gacctgcata tttaacggtc
    19141 ataacttttg tatcaccatt ataattaata tcaaaatctt ggaacgtgtt gtttgtaggt
    19201 tgaacattta acttcgcagc attatcagct gttgaacttg atgtatacgt tgtcgcaaca
    19261 ccataactat ctgttgttac aaaggcacca aacgcacctc caccagctac attagatggg
    19321 tcagctttcg cctttgcagc tgaatttggc gtagatgtat tgtgatacgt atccaatttg
    19381 aaaccaaatg cgttacttaa gccaccaata cctactgcgg caccgtttaa ccctgtttca
    19441 cctaatacac ctggtgaaaa ggcaaaaccg ataccatctc caccatttcc atgcccttca
    19501 tatttgttac ctaaatttac ttttccagaa aaatgaaaac tcttattaga gtcaatacgt
    19561 gttcctaatg taatggcacc tttttgactg taagtatctt gcgttaacgt cacaataccg
    19621 gtactttggt cataagtggc attacctgaa gttgtcatat attgttttaa gttatcttta
    19681 ttaactgtaa ttgtattagc agttaatgcg gttgtcgtcg ctgctgacgc aaatgttgac
    19741 atagctaagc gactgaaagt tcgaagtttt actggtgcgg tgctagttga cgttgtgcta
    19801 gttttgttta agttggctga agatggcgtt gtgctttgtg aagtgttatt tgatgcagta
    19861 ctttgatttg ttgatgtatt aattggttgt tctgtacttg aagttgaagc tacagattta
    19921 gtatcagaac ttgatgtagt attctttgag gatgttgatt ctgatgtaga tgtcaatttt
    19981 tcttgttgat tgcttgtact attagttgtc gaagtgacat tctcagactt ttcacttgag
    20041 actgtgtcac tatttgatgt ttgtaccgaa ctactatttt tcgttacgct tgtagaatcg
    20101 gctgttgatg ttgatgcatc gattgtcgtt gagttttgat tacctactgt ttcactttgt
    20161 gtatttaatt cagatgttaa tggtgcatca gaagccgcaa aagcttgctg gtcatgcaac
    20221 atgtttaccg tgaatgcacc accaataacc gctgtagttt tcagtccgta tcccgtcatt
    20281 tttttactaa tgctttgatt atcttgactc actatactat gactaataaa tggtagtccc
    20341 attattttga acatttctat ttctttaatt ccggatttca cccaattttt tccagattta
    20401 taaagtctta ctcttgtttt ttcgtttgct aagctgtcat gaaattcttt ctgtctttta
    20461 ctcatgtaat aactccttgt attatcttta cattcattag attataatat atgccactat
    20521 tcaatttaat acaactcttt tttcaaataa aaaatactta atttgtcaaa atccaatttt
    20581 tctcaaaagt atattctttg atgaaatcgc tttctttatt gtgtgggatt tagtataatt
    20641 ttttaactat attctgaata acatgcctta ttatgtttat ataattttga aaatcagtgc
    20701 ttatcgtctt ggacatcttt tatttatttg gtaaaaactt ctttttatta aaatgtattt
    20761 atcatccacc ttttattcat
//
LOCUS       DALMNS010000042        20737 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.042, whole genome shotgun sequence.
ACCESSION   DALMNS010000042 DALMNS010000000
VERSION     DALMNS010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20737
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.042"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(117..1868)
                     /gene="srrB"
                     /locus_tag="O6Y56_001311"
     CDS             complement(117..1868)
                     /gene="srrB"
                     /locus_tag="O6Y56_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     SrrB"
                     /protein_id="HDB5574566.1"
                     /translation="MMSRLNSVVIKLWLTIILIVTTVLILLSIALITFMQYYFTQETE
                     NAIREDARRISSLVEQSHNKEEAIKYSQTLIENPGGLMIINNKHRQSTASLSNIKKQM
                     LNEVVNNDHFDDVFDKGKSVTRNVTIKEKGSSQTYILLGYPTKAQKNSHSKYSGVFIY
                     KDLKSIEDTNNAITIITIITAVIFLTITTVFAFFLSSRITKPLRRLRDQATRVSEGDY
                     SYKPSVTTKDEIGQLSQAFNQMSTEIEEHVDALSTSKNIRDSLINSMVEGVLGINESR
                     QIILSNKMANDIMDNIDEDAKAFLLRQIEDTFKSKQTEMRDLEMNARFFVVTTSYIDK
                     IEQGGKSGVVVTVRDMTNEHNLDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTE
                     PDEIKESLAIVLDESKRLNRLVNELLNVARMDAEGLSVNKEIQPIAVLLDKMKIKYRQ
                     QADDLGLNMTFNYCKKRVWGYDMDRMDQVLTNLIDNASRYTKPGDEIAITCAENESED
                     ILYIKDTGTGIAPEHLQQVFDRFYKVDAARTRGKQGTGLGLFICKMIIEEHGGSIDVK
                     SELGKGTTFIIKLPKPE"
     gene            complement(1849..2574)
                     /gene="srrA"
                     /locus_tag="O6Y56_001312"
     CDS             complement(1849..2574)
                     /gene="srrA"
                     /locus_tag="O6Y56_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator SrrA"
                     /protein_id="HDB5574567.1"
                     /translation="MSNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME
                     NNYACILLDLMLPEMDGIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVK
                     PFSPREVVLRVKALLRRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVNLT
                     PKEYELLIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSSEAA
                     HMIQTVWGVGYKFEVKSNDEPAK"
     gene            complement(2707..3444)
                     /locus_tag="O6Y56_001313"
     CDS             complement(2707..3444)
                     /locus_tag="O6Y56_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HDB5574568.1"
                     /translation="MTKELERLQKRIANSGYTSRRKAETLISEGKVKVNGTTVTELGT
                     KVKPSDMIEVEGIKIELEDKIYILFHKPTQVITSVSDDRGRTVVTDYFKDIEARIYPV
                     GRLDYDTSGLLLLTNDGEFTNLMTHPRYQIKKKYVAKLKGYLMREEVKALEKGIELED
                     GMTQPAEVKVKKQDKDKNTTLVEITITEGRNRQVRRMFEHFGHQVTKLSRIEYGPLNV
                     VGLNAGEGRVLTPHEVKVMRHLAEHGK"
     gene            complement(3437..3979)
                     /gene="scpB"
                     /locus_tag="O6Y56_001314"
     CDS             complement(3437..3979)
                     /gene="scpB"
                     /locus_tag="O6Y56_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HDB5574569.1"
                     /translation="MDNHGILESLLYTAGDEGLDEKQLLEILDISKDQLVELIENYSS
                     HGLIIQRFGTTYVLTTKKEAATYIEQLIEQKSQMKLSQAAMEVLSIIAYNQPLSRSDI
                     ELIRSINSDGAVKTLIAKGLVEAKVVNEQRSQQLITTDLFLNVFGISSIKDLPTTEED
                     DEEMDAFFSNLVNQKGEKND"
     gene            complement(3972..4703)
                     /locus_tag="O6Y56_001315"
     CDS             complement(3972..4703)
                     /locus_tag="O6Y56_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HDB5574570.1"
                     /translation="MYEVKLDAFNGPLDLLLHLIQKFEIDIYDIPMQALTEQYMQYVH
                     AMKQLEINIASEYLVLASELLMIKSKMLLPQSTSDMDVDDDPREDLVGRLIEYQNYKE
                     YTAILNDMKEERDFYFTKRPTDLSHLETDESWDPNHTIDLTELIVAYQRVKNRVELNT
                     PKSVEIRKETFTIQQATEQLTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKA
                     GIINIEQQRNFEDINIIRGVNYHFG"
     gene            4795..5301
                     /locus_tag="O6Y56_001316"
     CDS             4795..5301
                     /locus_tag="O6Y56_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF309 domain-containing protein"
                     /protein_id="HDB5574571.1"
                     /translation="MQQALINFYYQFHTKQHYFLCHDILEDAWKAENNYSKQDAVVSL
                     ILFATACYHYRRNNLKGAYKSFNKSKEIIQNAKDRDALHLNLNDYQLLIEQQIAKLNA
                     AKPFSSVILPITPDFERIIKANYPDYNYNHETATDPFIVDHHMRRDRSEVIAAKEEAI
                     QLRKHRRN"
     gene            complement(5379..6266)
                     /gene="xerD"
                     /locus_tag="O6Y56_001317"
     CDS             complement(5379..6266)
                     /gene="xerD"
                     /locus_tag="O6Y56_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HDB5574572.1"
                     /translation="METIIEEYLRFIQIEKGLSSNTIGAYRRDLKKYQDYMTEHHISH
                     IDFIDRQLIQECLGHLIDQGQSAKSIARFISTIRSFHQFAIREKYAAKDPTVLLDSPK
                     YDKKLPDVLNVDEVLALLETPDLNKINGYRDRTMLELLYATGMRVSELIHLELENVNL
                     IMGFVRVFGKGDKERIVPLGDAVIEYLTTYIETIRPQLLKKTVTEVLFLNMHGKPLSR
                     QAIWKMIKQNGVKANIKKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLY
                     THVSKSQIRKMYNQFHPRA"
     gene            complement(6315..6764)
                     /locus_tag="O6Y56_001318"
     CDS             complement(6315..6764)
                     /locus_tag="O6Y56_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HDB5574573.1"
                     /translation="MEERLNRVKQQLQQSSYKLTPQREATVRVLIENEKDHLSAEDVY
                     LKVKDKAPEIGLATVYRTLELLAELKVVDKINFGDGVARFDLRKEGAKHFHHHLVCME
                     CGRVDEIDEDLLPEVENRVENEFNFKILDHRLTFHGVCETCQAKGKG"
     gene            complement(6869..7411)
                     /locus_tag="O6Y56_001319"
     CDS             complement(6869..7411)
                     /locus_tag="O6Y56_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HDB5574574.1"
                     /translation="MDLNEKTIDRTVIYNGKIVDVEIHTVTLPNGETSTRELVYHNGA
                     VAVCAVTPKKEVVLVKQYRKPVEKPLLEIPAGKLEDDEDRVEAAKRELEEETGYIAKE
                     LTHVVDMYGSPGFCDEQLSIYFTDNLEEGTVHLDEDEFVEVIKVPIENVKSMLMNKEI
                     EDAKTIIALQHLLLNYNHSK"
     gene            7493..8401
                     /locus_tag="O6Y56_001320"
     CDS             7493..8401
                     /locus_tag="O6Y56_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDB5574575.1"
                     /translation="MQKNILKSGIALSELGLGCMSLGTDLKKAEQILDCAVENGITYF
                     DTADMYDKGINESVVGKALLKYQQRDDIVIGTKVGNRLTKDGSITWDPSKSYIKEAVK
                     GSLKRLGIDHIDLYQLHGGTIDDPLDETISAFDELKQEGIIRAYGISSIRPNVIDYYL
                     KHSQIETIMSQFNLIDNRPESLLDAIHNNDVKVLARGPVSKGLLTSNSVNVLDNKFKD
                     GIFDYSHDELGETIASIKEIESNLSALTFSYLTSHDVLGSIIVGASSVDQLKENIENY
                     HTKVSLDQIKTARARVKDLEYTNHLV"
     gene            complement(8617..8865)
                     /locus_tag="O6Y56_001321"
     CDS             complement(8617..8865)
                     /locus_tag="O6Y56_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574576.1"
                     /translation="MNCQSESVLRLCVRYAEQLSVFEEFTVLDILSDISVDQFSDSTL
                     YYTCEKFKLLVLQGNVLGVQVITNNDESTCEVKYRKVF"
     gene            complement(8881..9636)
                     /locus_tag="O6Y56_001322"
     CDS             complement(8881..9636)
                     /locus_tag="O6Y56_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDB5574577.1"
                     /translation="MKGQHFIVTGGTSGLGLSIVRKLLENKVNVTLLVRDVDKAARIF
                     EQESGKTINVIPCDLNDMKSIQALQFEENISFDGFIYSAGLGYFKSISDHNFSEMIET
                     YQLNLISFNVLYTVLRPYLTSNAHIVGISSQAAFSTQANAAHYGASKAGFYALMNALR
                     LESPNLHIMTVNVGPIDTPFHQKADPSMKYAKKMGKIMLDANQLAEDIIYGIKTKQLE
                     INRPKWMHHALKMYQIAPRFFERCFPKLFKNKA"
     gene            9778..10593
                     /gene="proC"
                     /locus_tag="O6Y56_001323"
     CDS             9778..10593
                     /gene="proC"
                     /locus_tag="O6Y56_001323"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002485765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDB5574578.1"
                     /translation="MKLVFYGAGNMAQAIFTGIINSSNLDANDIYLTNKSNEQALKAF
                     AEKLGVNYSYDDATLLKDADYVFLGTKPHDFDALATRIKPHITKDNCFISIMAGIPID
                     YIKQQLECQNPVARIMPNTNAQVGHSVTGISFSNNFDPKSKDEINDLVKAFGSVIEVS
                     EDHLHQVTAITGSGPAFLYHVFEQYVKAGTKLGLEKEQVEESIRNLIIGTSKMIERSD
                     LSMAQLRKNITSKGGTTQAGLDTLSQYDLVSIFEDCLNAAVDRSIELSNIEDQ"
     gene            complement(10698..11618)
                     /gene="rnz"
                     /locus_tag="O6Y56_001324"
     CDS             complement(10698..11618)
                     /gene="rnz"
                     /locus_tag="O6Y56_001324"
                     /EC_number="3.1.26.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HDB5574579.1"
                     /translation="MEVTFFGTSAGLPTKERNTQAIALNLEPYSNSIWLFDVGEGTQH
                     QILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYVE
                     MSMNLSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTIN
                     VEALKNIGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGQIVAIFGDTKPCSNE
                     RVISRDADVMVHEATYIDGEKHLANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNT
                     EDINEIYQTLIQNEDTPNFNFVKDFDSFKV"
     gene            11931..13415
                     /locus_tag="O6Y56_001325"
     CDS             11931..13415
                     /locus_tag="O6Y56_001325"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HDB5574580.1"
                     /translation="MSTKNKHIPCLITIFGATGDLSHRKLFPSIFHLYQQDNLDEHIA
                     IIGIGRRDITNDDFRNQVKSSIQKHVKDTNKIDAFMEHVFYHRHDVSNEESYQELLDF
                     SNELDSQFELKGNRLFYLAMAPQFFGVISDYLKSSGLTDTKGFKRLVIEKPFGSDLKS
                     AEALNNQIRKSFKEEEIYRIDHYLGKDMVQNIEVLRFANAMFEPLWNNKYISNIQVTS
                     SEILGVEDRGGYYESSGALKDMVQNHMLQMVALLAMEAPISLNSEDIRAEKVKVLKSL
                     RHFQSEDVKKNFVRGQYGEGYIDGKQVKAYRDEDRVADDSNTPTFVSGKLTIDNFRWA
                     GVPFYIRTGKRMKSKTIQVVVEFKEVPMNLYYETDKLLDSNLLVINIQPNEGVSLHLN
                     AKKNTQGIETEPVQLSYSMSAQDKMNTVDAYENLLFDCLKGDATNFTHWEELKSTWKF
                     VDAIQDEWNMVDPEFPNYESGTNGPLESDLLLARDGNHWWDDIQ"
     gene            13645..14511
                     /locus_tag="O6Y56_001326"
     CDS             13645..14511
                     /locus_tag="O6Y56_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDB5574581.1"
                     /translation="MDVIKQIQQAIVYIEDRLLEPFNLQELSDYVGLSPYHLDQSFKM
                     IVGLSPEAYARARKMTLAANDVINGATRLVDIAKKYHYANSNDFANDFSDFHGVSPIQ
                     ASTKKDELQIQERLYIKLSTTERAPYPYRLEETDDISLVGYARFIDTKYLSHPFNVPD
                     FLEDLLIDGKIKELRRYNDVSPFELFVISCPLENGLEIFVGVPSERYPAHLESRFLPG
                     KHCAKFNLQGEIDYATNEAWYYIESSLQLTLPYERNDLYVEVYPLDISFNDPFTKIQL
                     WIPVKQSPYDED"
     gene            complement(14594..16243)
                     /locus_tag="O6Y56_001327"
     CDS             complement(14594..16243)
                     /locus_tag="O6Y56_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HDB5574582.1"
                     /translation="MNKQWWKEAVAYQVYPRSFNDSNHDGIGDLPGMIDKLDYLKDLG
                     IDVIWLSPMFKSPNDDNGYDISDYQEIMDEFGTMEDFDRLLKGVHDRGMKLILDLVVN
                     HTSDEHPWFIESKSSKDNPKRDWYIWQDPKPDGSEPNNWESIFNGSTWEYDANTEQYY
                     FHLFSKKQPDLNWGNPEVRDAVFEMMNWWFDKGIDGFRVDAITHIKKTFEAGDLPVPE
                     GKTYAPAFDVDMNQPGIQTWLQEMKDRSLSKYDIMTVGEANGVSPDDADDWVGEENGK
                     FNMIFQFEHLGLWNSGDSHFDVNSYKSVLNRWQKQLENKGWNALFIENHDQPRRVSTW
                     GDDDKYWYESATSHAAVYFLQQGTPFIYQGQEIGMTNYPFESIETFNDVAVKNDYQIV
                     KAQGGDVDALLAKYKDENRDNSRTPMQWDDTLNGGFTNGEPWFPVNPNYKTINVAQQL
                     EDEHSVLQFYKDLIQLRKSNDVYVYGQFDLVDAENLQVFAYTRTLNEKQVLIVGNLTN
                     HEAELTVPFDISHGEVKLFNYDAKVNLKQLRPYEACVIELN"
     gene            complement(16259..17278)
                     /locus_tag="O6Y56_001328"
     CDS             complement(16259..17278)
                     /locus_tag="O6Y56_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDB5574583.1"
                     /translation="MVTIKDVALKAGVSPSTVSRVIKGNQRISEATISKVKKVMEELN
                     YFPNTAARTLITNQTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVS
                     NNMNDLMNEVYKMIKQRMVDAFILLYSKENDPIKQMLIDENMPFIVIGKPTSDIDHQF
                     THIDNDNILASENLTRHVIEQGVDELIFITEKGDFEVSKDRIQGFETIASQNKINYQI
                     IETSNEREVIFNYMQNLHTRLKDPNIKQAIISLDAMLHLAILSVLYELNIEIPKDVMT
                     ATFNDSYLTEIASPPQTCIDIKPRMLGQQAGAAILNILKNKAQDVIELVIIDTELKIR
                     KSTQR"
     gene            complement(17279..17533)
                     /locus_tag="O6Y56_001329"
     CDS             complement(17279..17533)
                     /locus_tag="O6Y56_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574584.1"
                     /translation="MVDVYLISKMAKVTILQLVTKQSILIFIQTFILIFGLNFSMKVL
                     FLSFYAIVCTNLLTFLESVTKLILYRDWKRFPIQRLTGGD"
     gene            complement(17472..17843)
                     /locus_tag="O6Y56_001330"
     CDS             complement(17472..17843)
                     /locus_tag="O6Y56_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDB5574585.1"
                     /translation="MEKLNQVMLYVDDVEKAKAFWTETLEFVVVSETPLAEDYVAVEV
                     SPTKDAETSLTIMAKEFIEKYSPEVNLGTPSLMFKEKNFDALYSKLNDLGLTGHDIAE
                     MNGRRVFNFQDGQGNYFAVSD"
     gene            complement(18062..19468)
                     /gene="gndA"
                     /locus_tag="O6Y56_001331"
     CDS             complement(18062..19468)
                     /gene="gndA"
                     /locus_tag="O6Y56_001331"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HDB5574586.1"
                     /translation="MTQQIGVIGLAVMGKNLAWNIESRGYSVSVFNRSSEKTDLMVEE
                     SKGKNIHPTYSLEEFVNSLEKPRKILLMVQAGKATDATIDSLLPLLDDGDILIDGGNT
                     NYQDTIRRNKALAQSAINFIGMGVSGGEIGALTGPSLMPGGQEEAYNKVADILDAIAA
                     KAKDGASCVTYIGPNGAGHYVKMVHNGIEYADMQLIAESYAMMKELLGMSHEDIAQTF
                     KDWNAGELESYLIEITGDIFMKLDENKEALVEKILDTAGQKGTGKWTSINALELGIPL
                     TIITESVFARFISSIKEERVNASKELNGPKASFDGDKKDFLEKIRKALYMSKICSYAQ
                     GFAQMRKASEDNEWNLKLGDLAMIWREGCIIRAQFLQKIKDAYDNNPGLQNLLLDPYF
                     KNIVTEYQDALRDVVATGVQNGVPTPGFSSSINYYDSYRAADLPANLIQAQRDYFGAH
                     TYERKDKEGVFHTQWIEE"
     gene            complement(19536..20669)
                     /locus_tag="O6Y56_001332"
     CDS             complement(19536..20669)
                     /locus_tag="O6Y56_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HDB5574587.1"
                     /translation="MINEERLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKE
                     DEAAKHPKLGANNLVCTMKSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSD
                     GTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVGEESGLIGAKELNSELLDA
                     DFGYAIDASADVGTTVVGAPTQMLISAKIFGKTAHASTPKEGVSAINIAAKAISRMKL
                     GQVDEITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASE
                     LGGKAVVTVEQSYPGFKINDNETVVKIAQESARNLGLSANTIISGGGSDGSIINTFGI
                     PSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVARQSK"
BASE COUNT         6628 a         3816 c         3001 g         7292 t
ORIGIN      
        1 aaaaaaccta aatcctaatc cacatacaaa actccccaca tcaatttaaa aaaacgcatg
       61 ctataaatta gagtctctaa tcaataacat gcgttcttaa ataactatat tcagttttat
      121 tccggctttg gtaatttgat aataaacgtt gtgccttttc ctaattcgct tttaacatca
      181 atggaaccac catgctcttc gataatcatt ttacaaatga acaaacctaa accggtacct
      241 tgtttacctc gcgttctcgc tgcatcaact ttataaaaac gatcaaatac ttgttgtaaa
      301 tgttctggtg caatgcctgt gcctgtatct ttaatgtata aaatatcttc gctttcattt
      361 tcagcacaag taattgcaat ttcatctcca ggtttcgtat aacgtgatgc attatcaatt
      421 aagttcgtta gtacttggtc catgcgatcc atatcataac cccaaacacg cttcttacaa
      481 taattaaaag tcatatttag acctaaatca tcagcttgtt ggcgatactt aattttcatc
      541 ttatctagta acactgcaat aggctgaatt tctttattta cggataaccc ttcagcatcc
      601 atgcgagcga catttaacaa ttcattaact aaacgattta aacgtttcga ttcatcaagg
      661 acaatggcaa gcgattcttt tatttcatcc ggttctgtaa caataccatc tacaattgac
      721 tcagtataac cttgaagtaa tgatatcggt gtacgtaatt catgtgatac attagcaatg
      781 aaatctttct tcatttgatc tagattgtgc tcattagtca tatcacgaac tgtcacaaca
      841 acaccacttt tacctccctg ttcaatcttg tcgatatagc ttgtggtcac aacaaagaat
      901 cgtgcattca tttctaaatc gcgcatttca gtttgttttg atttaaaagt atcttcaatt
      961 tgtcttaata agaaagcttt agcatcttca tcaatattgt ccataatatc attcgccatc
     1021 ttattagata agataatttg tcgactctca ttaataccta ggacaccttc taccatagag
     1081 ttaattaaac tgtctctaat atttttagat gtggataatg cgtcgacatg ctcttcgatt
     1141 tctgtactca tctgattaaa tgcctgcgat aattgaccaa tttcatcttt cgttgtgaca
     1201 gaaggtttat aagagtaatc cccttcagat acacgtgtag cttggtctct taaacgtctt
     1261 aaaggttttg taattcttga cgataagaaa aacgcaaaga ctgttgtaat tgttaagaaa
     1321 ataacagccg taattatagt gataatcgta atagcattat ttgtatcttc gattgatttc
     1381 aagtctttat atataaaaac gccactatat ttgctatgac tattcttctg tgcttttgtt
     1441 ggatagccta acaaaatata tgtttgagat gagccctttt ctttaatcgt tacatttcga
     1501 gtaacagatt tacctttatc aaacacatcg tcaaaatggt cgttgttgac tacttcattc
     1561 aacatttgct ttttaatatt agaaagtgaa gccgttgatt gacgatgttt attatttata
     1621 atcatcaacc caccaggatt ttcaattaat gtttggctat attttattgc ttcttcttta
     1681 ttatgtgatt gttcgaccag tgaacttata cgtctagcat cttctcttat ggcattttcg
     1741 gtttcttgtg tgaaatagta ttgcataaag gtaattaaag caatacttaa taaaattaaa
     1801 actgtcgtca ctattaaaat aatagttaac cacagtttaa ttacgacact atttagccgg
     1861 ctcatcatta gatttaacct caaatttata cccaacgccc cagactgttt gaatcatatg
     1921 cgcagcttcg ctagacacac gatttaactt ttctctaagt cgtttaacat gagtatcaac
     1981 tgttcttaaa tcaccataga attcataatg ccaaacttct tttaataatt gttcacggtc
     2041 aaatacttta tttggtgttt tagctaaata tattaataat tcgtactctt taggagtcaa
     2101 attaacttct tgattatcag caagtacgcg atgtgcatca ttatctattt ctaaatgttt
     2161 aaattcaatc acatcacgtg cgtgaggttc gctttgttct acagttgtag attgcgttct
     2221 tcttagaagt gctttaactc ttaagactac ttctcttggt gaaaatggtt tgacgatata
     2281 atcatctgca ccagattcaa aaccttcaac acggtttgtt tcttcacctt tagcagtcaa
     2341 cataataatc ggtgtttgtt tatgttcacg caatttagtt gccacctgga taccatccat
     2401 ttcaggcaac attaaatcta gtagtatgca agcataatta ttctccattg caagttcata
     2461 agcctcttgg ccattacttg cttcatggat ttcaaaagat tctctttcta aatacatttt
     2521 aagtaatctt ctgattctat cctcatcatc tacgataagt atttcgttcg acatacaggt
     2581 catacctccc acacatgctt ttctttacaa aagtattata tcacaggaaa gcgcatacag
     2641 ttattaaaaa cctaaaattt tgtgaaaaaa ttctcaaact ttgtgataaa tacatatttt
     2701 atttaattat ttcccatgtt ctgctaaatg acgcatcacc tttacttcat gaggcgtcaa
     2761 tacacgtcct tcaccagcat tcaaaccgac aacatttaaa ggcccatatt caatacgaga
     2821 cagtttcgtc acttgatgac caaaatgttc gaacattctt ctgacttgac gattacgccc
     2881 ttctgtaatt gtaatttcaa ccaatgttgt gtttttatct ttatcttgtt tcttaacttt
     2941 cacttcagcc ggttgcgtca taccatcttc taattcaata cctttttcta gcgctttcac
     3001 ttcttcacgc attaaatagc cttttaattt tgcgacatat ttcttcttaa tttgatatcg
     3061 aggatgtgtc attaaatttg taaattcacc atcatttgta agtaataaca gtccagaagt
     3121 atcatagtct aaacgaccaa caggataaat acgcgcttcg atatctttaa agtaatctgt
     3181 aaccactgta cgtcctctat catcagatac acttgttatc acttgagttg gtttatggaa
     3241 taaaatgtaa attttgtctt ctagttctat tttaatacct tcaacttcaa tcatatctga
     3301 aggcttcact tttgttccta attcagtgac agttgtacca ttcactttca cttttccttc
     3361 agaaattaaa gtttctgctt tacgtcttga agtataaccg ctatttgcta tacgtttttg
     3421 taatcgttct aattctttag tcattttttt ctcctttttg attgactaga ttactgaaaa
     3481 aagcatccat ttcttcatcg tcttcttcag ttgtcggcaa atcttttata cttgaaatac
     3541 caaatacatt taaaaataaa tcagtagtga ttaattgttg gctacgctgt tcattgacca
     3601 ctttagcctc aactagtcct ttggcaatca atgttttaac tgcaccatct gaattgatac
     3661 tacgaattaa ttcaatatca cttcttgata atggttggtt ataagcaata attgatagta
     3721 cttccattgc tgcttgtgat aatttcattt gtgacttttg ttcaattaat tgttcaatgt
     3781 acgttgccgc ttctttttta gtcgttaaaa catacgtcgt tccaaatcgt tgtattatta
     3841 atccatgtga tgaataattt tcaattaatt ctacgagttg gtctttcgat atatctaaaa
     3901 tttctaatag ctgtttttca tctaaacctt catcgccagc tgtatataat agcgactcta
     3961 atataccgtg attatccaaa atggtagttc actcctctaa taatgttaat atcttcaaaa
     4021 ttacgttgtt gctcaatatt aattattcct gcttttgaca tctctaaaat agctaaaaag
     4081 tgagtgacta cttgttcaat tggctcagaa aacgtaaaca gactaaagaa gttaaaatga
     4141 tctttatctt tcaatctcga tgtcaattgt tctgtagctt gttgaatggt aaatgtctct
     4201 tttcggattt caacagattt aggtgtattt aactcaactc tatttttaac tctttgataa
     4261 gctacaatta attcagttaa atcaatcgta tgatttggat cccaagattc atctgtttcc
     4321 aaatgagata aatctgtcgg tctttttgta aaataaaaat ctctttcttc tttcatgtca
     4381 tttaaaatag cagtatattc tttataattt tgatattcta ttaaacgccc aactaaatct
     4441 tcccgtgggt catcatcaac atccatatct gatgttgatt gtggtaatag catcttactt
     4501 ttaatcatta agagttctga cgctaatact aggtattcac ttgcaatatt aatttcaagc
     4561 tgtttcattg catgaacgta ctgcatatac tgctctgtta atgcttgcat aggaatatca
     4621 taaatatcta tttcaaattt ttggataaga tgcagtaata aatctaatgg tccattgaaa
     4681 gcatctaatt taacttcata cataatatct acctcgtatt gcgtcatatg tgcataattc
     4741 tctaaaatat tatagcatga aaataactta cttttaaatt ggggtgataa caaaatgcaa
     4801 caggcactga taaatttcta ttatcaattt catactaagc aacattattt cctatgtcat
     4861 gacattttag aagatgcatg gaaagctgaa aataactaca gtaagcaaga tgcagttgtt
     4921 agtttaatct tgtttgcaac tgcttgttac cattatcgcc gcaataattt aaaaggcgcc
     4981 tataagtctt ttaataaatc taaagaaata atacaaaatg ctaaagatag agatgcgtta
     5041 caccttaatt taaatgatta tcagttgtta attgagcaac agattgcaaa attgaatgca
     5101 gcaaagcctt tttcatctgt tatattacca ataactccag actttgagcg catcatcaag
     5161 gccaactatc cagattataa ttataatcac gaaacagcaa cagatccttt tattgtagac
     5221 catcacatgc ggcgtgatcg ttcagaagtt attgcagcaa aagaagaagc gattcaatta
     5281 agaaaacata gacgtaatta atcaaccaat ttaaaaaagc cacaatagca cagacatttt
     5341 tagtcatgtg tattgtgact tttgagttat ggttcacttt atgctctagg atgaaattgg
     5401 ttatacattt ttctaatttg agattttgaa acatgtgtat agagttgggt agtagagatg
     5461 tcagagtgac ctaacatctc ttgcactgct cttaaatctg cgccattttc caataaatgt
     5521 gtcgcaaaag agtggcgtaa cgtatgtggc gttagcgtct ttttaatgtt tgcctttaca
     5581 ccattttgtt taatcatttt ccatattgct tgtcgtgata aaggtttacc atgcatattt
     5641 aaaaataaga cttcagtaac agtctttttt aaaagttgcg gtctaatcgt ttcaatataa
     5701 gtggttaagt actcaatgac tgcgtcgcct aatggtacaa ttctttcttt atcgccttta
     5761 ccaaatacgc gtacaaaccc cattattaag ttcacgttct ctaactctaa atgtatcaat
     5821 tcagatacac gcattcccgt tgcgtacaga agttctaaca tcgtacgatc acgataacca
     5881 ttaattttat ttaaatccgg cgtttctaat aaagccaaca cttcgtcaac atttaaaacg
     5941 tcaggcaatt ttttgtcata ttttggtgaa tctaataata ccgttggatc tttcgccgca
     6001 tatttttctc ttatagcaaa ttgatgaaaa ctacggattg ttgaaataaa tcgcgcaata
     6061 gatttagcag attgcccttg gtctattaaa tgccccaaac actcttgaat taattgtcga
     6121 tctataaaat caatatgcga gatatgatgt tcagtcatat aatcttgata ctttttcaaa
     6181 tcacgtctat aagcaccaat tgtgttagaa cttagacctt tttcaatttg tataaaacgc
     6241 aaatattctt caataattgt ttccataacc acacctctaa aaaaagcgaa ggttaattta
     6301 acctacgcaa tttactatcc tttaccttta gcttggcacg tttcacacac accatggaaa
     6361 gttaaacgat gatctaaaat tttaaaattg aactcatttt caactcgatt ttcaacttct
     6421 ggtaacaaat cttcatcgat ttcatctaca cgaccacatt ccatacatac taaatgatgg
     6481 tggaaatgtt ttgcgccttc ttttcttaaa tcaaaacgag cgacgccatc accaaagtta
     6541 attttgtcga caacttttag ttcagctaac aactctaacg ttctgtatac tgtcgccaag
     6601 ccaatttcag gcgctttgtc ttttactttc agatatacgt cttcagcact tagatgatct
     6661 ttttcatttt caattagaac tctaacagta gcttcgcgtt gtggcgttag cttatatgat
     6721 gattgttgta attgttgctt aacgcgattt aatcgttctt ccaacgatgt ccactcccct
     6781 actaataatt aaaatcatta caaataattt caaacttcac aattaaaact aacagttttc
     6841 tcaataaaat gcaagctttt ctcatttgtt atttagaatg attataattt aataataggt
     6901 gttgcaatgc aatgatagtc ttcgcatctt ctatttcttt attcattagc atcgatttaa
     6961 cattctcaat cggaacttta atgacttcga caaattcatc ttcatctaag tgaactgtgc
     7021 cttcttctaa attatccgta aaatatattg ataattgttc atcacaaaaa cctggtgaac
     7081 catacatatc tacaacatgt gttaactctt tggcaatata tcctgtttct tcttctaatt
     7141 cacgcttagc cgcttcgact ctatcttcat catcttctaa tttaccagct ggaatttcta
     7201 gcaatggttt ttctactggt ttacgatact gtttcactaa tacgacttct tttttaggtg
     7261 tcactgcaca aacagcaact gcaccattat gataaactaa ttctcttgtt gacgtttcac
     7321 cgtttggtaa tgtcactgta tgaatttcta catctacaat tttgccatta taaataactg
     7381 ttcgatcaat tgttttttca tttaaatcca ttataatcac gttcctttaa attcatatta
     7441 tatattgata cactatgctt gttagctaaa gtgtatcgaa aggagaacag acatgcaaaa
     7501 aaatatatta aaaagtggta ttgcattatc tgaattaggt ctaggttgca tgagtttagg
     7561 tacagattta aaaaaagccg aacaaatttt agattgcgct gttgaaaatg gtatcactta
     7621 ttttgataca gcagacatgt acgataaagg tataaatgaa tcagttgttg gtaaggcact
     7681 tcttaaatat caacaacgcg atgatattgt cattggtaca aaagtaggca atcgtttaac
     7741 aaaagatggc agtataacat gggatccgag taaatcctat attaaagagg cagttaaagg
     7801 ttcactaaag cgtttaggca ttgatcatat cgatttatat caacttcatg gcggaaccat
     7861 tgatgaccca ttagacgaaa caataagcgc atttgatgaa ttgaaacaag aaggaattat
     7921 acgtgcttac ggtatttctt ctattcgccc aaatgtaatt gattattatt taaaacatag
     7981 tcaaatcgaa acgataatgt ctcaattcaa tttgattgat aatcgtccag aatcattatt
     8041 agatgcaatt cacaacaatg atgttaaagt attagcaaga ggacctgtgt ctaaaggatt
     8101 attaacttca aacagtgtta atgtgctcga caataaattt aaagatggta tttttgatta
     8161 ttctcatgat gaattgggtg aaacaatagc ctctattaaa gaaattgaaa gtaatttatc
     8221 tgcattgaca tttagttatt taacatcaca tgacgtgctt ggttccatca ttgtaggtgc
     8281 aagtagcgtc gaccaattaa aagaaaatat tgaaaactat catactaaag ttagtttaga
     8341 tcagattaaa acagcaagag ctcgtgtcaa ggatttggaa tataccaatc atttagtgta
     8401 gaagtcattt tcagtaataa aaacagcagt atgaggcgtt tcattataaa aatgccttac
     8461 tgctgttgtt tatgtaaaat tcgctataat ttatgattaa gattactcac ttatgataga
     8521 aattaaagcg ttgtccttac gcatcagtat ttagtaattt cgccctgcgg cagtgcctta
     8581 agcaaacttc tgccacttca tcttttaata attttattaa aacacctttc tatatttcac
     8641 ttcgcatgtt gattcatcat tattagttat tacttgtaca cccagcacat ttccttgcaa
     8701 cacaagtagt ttgaattttt cacaagtata atataatgta ctgtctgaaa attggtctac
     8761 agaaatatcg cttaaaatat ccagcactgt aaattcttca aatactgata gttgttccgc
     8821 atatcgtaca caaagtctta acacactctc cgattgacag ttcattgcca tcccacctat
     8881 ttatgcttta tttttaaata atttagggaa acatcgttca aaaaatctag gcgcaatttg
     8941 atacattttc aacgcatgat gcatccattt aggccgatta atttctaatt gttttgtttt
     9001 aatgccataa atgatatctt ctgcaagctg attagcatca agcataattt tccccatctt
     9061 tttagcatac ttcattgatg ggtcggcttt ttgatgaaaa ggtgtatcaa tcgggccaac
     9121 attaactgtc atgatatgta agtttggtga ctctagtctt aaagcattca ttaatgcata
     9181 aaaccctgct ttcgatgccc cataatgtgc agcatttgct tgtgtggaaa atgcagcttg
     9241 acttgaaata cctacaatat gtgcgttaga tgttaaatat ggtctcaaca cagtatataa
     9301 aacattaaaa ctaattaaat taagctgata cgtttcaatc atttctgaaa aattatggtc
     9361 tgaaatagat ttgaaataac ctaaacctgc actataaatg aatccatcga atgatatatt
     9421 ttcttcaaat tgcagtgcct gtatcgactt catatcattt aagtcacaag gaataacatt
     9481 tatagttttc cccgattcct gttcaaagat tctagctgct ttatcaacat cacgcaccaa
     9541 caacgttaca ttcactttat tttctagtaa ctttcggaca atcgataaac ctaaaccact
     9601 tgtaccacca gtcactataa aatgttgtcc tttcatcaat taaccttcct tttccattat
     9661 atagaatgca atttatcaac tttacataat tgagacaagt tgattatctt tcctaatata
     9721 tatacaataa taagaaaata taacatacaa atcaaaaact aaagggatgt gacgttaatg
     9781 aaactcgtat tttatggagc tggtaatatg gcacaagcta tatttacagg aattattaac
     9841 tcaagcaact tagatgccaa tgatatatat ttaacaaata aatctaatga acaagcttta
     9901 aaagcattcg ctgaaaaact aggtgttaac tatagttatg atgatgcgac attattaaaa
     9961 gatgcagatt atgtattttt aggtaccaaa ccacatgact ttgatgctct agcaacacgc
    10021 atcaaaccac atatcacaaa agacaattgc ttcatttcaa ttatggcagg tattccgatt
    10081 gattatatta aacaacaatt agaatgccaa aatccagttg ctagaattat gccaaacaca
    10141 aatgcgcaag ttggacactc agttactggc attagttttt caaacaactt tgaccctaaa
    10201 tctaaagatg aaattaacga tttagttaaa gcatttggtt ctgtaattga agtatcagag
    10261 gatcatttac atcaagtaac agctatcacc ggaagcggcc cagcattttt atatcatgta
    10321 ttcgagcaat acgttaaagc tggtacgaaa cttggtctag aaaaagaaca agttgaagaa
    10381 tctatacgca accttattat aggtacaagt aagatgattg aacgttcaga tttgagcatg
    10441 gctcaattaa gaaaaaatat tacctctaaa ggtggtacga cacaagctgg ccttgataca
    10501 ttgtcacaat atgatttagt atctattttc gaagattgtc taaacgctgc cgtcgaccgt
    10561 agtattgaac tttctaatat agaagaccaa taaaaacaaa cccgccaaca catgtatgca
    10621 tcatcgcaag cactgtgttt gacgggttat ttttataaat tattactatt tggcaagcat
    10681 tgtttattac tttgtcatta gactttaaaa ctatcaaaat ctttcacaaa attaaaattc
    10741 ggcgtatcct cattttgtat caatgtttga taaatttcat ttatatcttc tgtattatag
    10801 cgattgctca aatgtgtaat caacgtacgt ttaacattgg cttcttttat caatgcaaat
    10861 acgtcttcaa tatggctatg atgataattg ttggctaaat gcttttcacc atctatatag
    10921 gtcgcttcat gtaccatcac atcagcatct ctagaaatca cacgttcatt agaacatggt
    10981 tttgtatcac caaaaattgc tacaatttga ccctgtttgg actcacctct aaaatctttt
    11041 gattgataaa cttgaccatt atgttcaaat gtatcatgag attttacttc ttgatattta
    11101 ggacctggtt caagaccaat gttttttaac gcttcaacat tgattgtacc tgtagtttca
    11161 ggtgccatta ctctatatcc atatgatgga ataccatgat taagtaaatg cgcctctaca
    11221 gtaaaaccat catgatgata tgttagatga tcatcgattt caatatatgt aattggatag
    11281 tttaaatgtg actctgataa attcatagac atttccacat atgctttaat tccttttggt
    11341 ccaactaatg taagcggctt ttgttcaccg ccctgaaaag aacgactaga aagtaatcct
    11401 ggcaaaccaa aaatatgatc gccatgcata tgagtaataa atatatgtgt cacttttcct
    11461 aatttaattg catgatgtaa aatttggtgc tgtgtacctt caccaacgtc gaaaagccat
    11521 atggaattgg aatatggttc taaatttaag gcgattgctt gtgtatttct ctcttttgta
    11581 ggcaaacctg cactcgttcc aaaaaatgta acttccatat atgcccctcc ttttcttcaa
    11641 ttcattttat cataaaattt gtatcaattt agttttaatt tatacttgaa tcaaaatctg
    11701 ttaaaaattc gtctttgcta gttaattttt ctaactttaa cgtagacaaa actatataaa
    11761 ttttgataat tacgttatac ttatcattaa taagtatcac attaaacatg atacatgaat
    11821 cgatatttca tttaagacac tgcatactgt cgagcatatt gaatgacctg ctgaatggat
    11881 tatcttataa taataaatca tatatctaat taagaattga ggttttaatc ttgagtacta
    11941 aaaacaaaca catcccttgt ttaatcacaa tctttggtgc aactggtgac ttaagccatc
    12001 gtaagttgtt tccatcaata ttccatctct accaacaaga caatttagat gaacatattg
    12061 ccatcatcgg tattggacgt cgtgacatta ctaatgatga tttccgtaat caagtaaaat
    12121 catcaattca aaagcacgta aaagatacaa acaaaattga cgcgtttatg gaacatgtct
    12181 tctatcatag acatgatgtt agtaatgaag aaagctatca agaattatta gattttagta
    12241 atgaattaga cagccaattt gaattaaaag gtaatcgact attctattta gcaatggcac
    12301 cacaattctt tggcgttatt tctgattatc taaaatcttc tggtcttact gatacaaaag
    12361 gatttaaacg ccttgttatc gaaaaaccat tcggtagtga tttaaaatca gccgaagcat
    12421 taaacaatca aattcgtaaa tcatttaaag aagaagaaat ttatcgtatt gaccactatt
    12481 taggaaaaga catggttcaa aatatcgagg tattacgttt tgcgaatgcg atgtttgaac
    12541 cattatggaa taacaaatat atttcaaaca tccaagttac atcttctgaa atactgggcg
    12601 ttgaagatcg tggtggttat tatgaatcaa gtggtgcact aaaagatatg gtgcaaaacc
    12661 acatgttaca aatggttgca ttattagcta tggaagcacc tattagttta aatagtgaag
    12721 atatccgtgc tgagaaagta aaagtactta aatcactgcg tcatttccaa tctgaagatg
    12781 ttaaaaagaa ctttgttcgt ggtcaatatg gcgaaggcta tatcgatggt aaacaagtta
    12841 aagcataccg tgatgaagat cgcgttgcag atgactctaa cactcctacc tttgtttcag
    12901 gtaaattaac aattgataac tttagatggg ctggcgtacc attctatatc cgtactggta
    12961 aacgtatgaa atctaaaaca attcaagttg tcgttgaatt taaagaagta ccaatgaact
    13021 tatactatga aactgataaa ctgttagatt caaacctatt agtaatcaat attcaaccta
    13081 atgaaggtgt atctttacat ctaaatgcta agaaaaatac acaaggtatc gaaactgaac
    13141 ctgttcaatt gtcttattca atgagcgctc aagataaaat gaatactgta gatgcatatg
    13201 aaaatctatt atttgattgt cttaaaggtg atgccactaa ctttacgcac tgggaagaat
    13261 taaaatcaac atggaaattt gttgatgcaa ttcaagatga atggaatatg gttgatccag
    13321 aattccctaa ctatgaatca ggtactaatg gtccattaga aagtgattta ttacttgctc
    13381 gtgatggtaa ccattggtgg gacgatattc aataattgaa ttaaaacgca catgttaaac
    13441 aaaaataaat gagcgaatga caaggattga ttacgaatca agtaaatcaa ttgttctatc
    13501 attcgctttt tttctagact atattatgaa attatatttt acaatgccca aaactatttt
    13561 aataatcatt gaacaaatgg gtgtataatt tatagaaata atgtagaata aaaataaatg
    13621 attgaattaa ttggagtgaa agttttggac gttatcaagc aaatacaaca ggcaattgtt
    13681 tatattgaag atcgtttatt agagcctttc aatttgcaag aattaagtga ttacgttggt
    13741 ctttcgccat accatcttga tcaatcattt aaaatgattg tcggcttatc tccagaagct
    13801 tatgcacgcg cgcgtaaaat gacactcgct gcaaatgatg tgattaatgg tgctacacga
    13861 cttgtagata tcgctaaaaa atatcactat gcaaattcaa atgattttgc aaatgatttt
    13921 agtgattttc acggcgtatc acctattcaa gcttctacta aaaaagatga attacaaatt
    13981 caagagcgat tatatatcaa attatcaact actgagagag caccctatcc atacagatta
    14041 gaagagacag atgatatttc attggttgga tatgcacgat ttatagacac taagtatttg
    14101 tcacatcctt ttaatgttcc ggatttttta gaagacttgc tcattgatgg taaaattaaa
    14161 gagttacgac gatataatga cgttagtcca tttgaactat ttgttattag ttgtcctctt
    14221 gaaaatggtt tagaaatatt tgtaggtgta ccaagtgaac gttatcctgc acacttagaa
    14281 agtcgatttt tacctggcaa acattgtgcg aaattcaatt tacaaggtga aattgattat
    14341 gcaactaatg aagcttggta ctatattgaa tcaagtttgc agttaacatt gccatatgaa
    14401 cgaaatgatt tatatgttga agtgtaccct ctcgatattt catttaatga cccattcact
    14461 aaaattcagc tttggattcc tgttaaacag agtccttatg acgaagatta aataattaaa
    14521 aacaaagaag ccccctaata tatctatagg tctacaaatg gccttagata ctattagggg
    14581 gcatattaat atgttaattt aattcgataa cacatgcttc atatggacgt aactgtttta
    14641 aattaacttt ggcatcataa ttaaatagct tcacttctcc atgacttata tcaaatggta
    14701 cagttaattc tgcttcgtgg ttagtaagat tacctacaat aagaacttgc ttttcattta
    14761 atgttctcgt gtatgcaaaa acttgtaaat tttcagcatc tactaaatca aattgaccat
    14821 atacgtaaac atcattagac tttcttaatt gaattaaatc tttataaaat tgtaatactg
    14881 aatgctcatc ttctaattgt tgtgcaacat tgatagtttt ataattcgga ttcactggga
    14941 accacggttc accatttgta aatcctccat ttaacgtatc atcccattgc attggtgtgc
    15001 gagaattatc tcggttctca tctttatatt ttgcaagtaa agcgtctaca tctccacctt
    15061 gagctttcac aatttgatag tcatttttaa cagcaacatc gttaaatgtt tcaatacttt
    15121 caaatggata attcgtcata ccaatttctt gaccttgata aatgaatggc gtaccttgtt
    15181 gcaagaaata aactgctgca tgacttgttg ctgattcata ccaatacttg tcatcgtcac
    15241 cccacgtcga tacacgtcgt ggttggtcgt gattttcaat aaacaacgca ttccaacctt
    15301 tattttcaag ttgtttttgc catctattta atacagattt atacgaattt acatcaaagt
    15361 gagaatcacc actattccac agtcccaaat gttcaaattg gaatatcata ttaaatttac
    15421 cattttcttc cccgacccag tcatcagcat catcagggct tacaccattc gcttcaccaa
    15481 cagtcataat gtcatactta cttaatgagc gatctttcat ctcttgtaac caagtttgta
    15541 tacctggctg attcatatct acatcaaatg ctggggcata tgttttaccc tcaggtacag
    15601 gtaagtcacc cgcttcaaac gtcttcttaa tatgcgtaat tgcatctact ctaaagccat
    15661 caatgccttt atcaaaccac cagttcatca tttcaaatac agcatctcta acttccggat
    15721 taccccaatt caaatcaggt tgttttttac tgaatagatg gaaataatat tgctcagtat
    15781 tagcatcata ttcccatgta gatccattaa agatactttc ccagttgttt ggttcagagc
    15841 catctggctt tggatcttgc caaatgtacc aatcacgttt gggattgtct ttactagatt
    15901 tagattctat aaaccaagga tgttcatcag atgtatgatt tacaactaaa tctaaaataa
    15961 gcttcatgcc tctatcatga acacctttta ataaacgatc aaagtcttcc atcgttccaa
    16021 attcatccat aatctcttgg tagtcactaa tatcataacc attgtcatca ttaggtgatt
    16081 taaacattgg actgagccaa atgacatcga tacctaaatc ttttaagtag tccaatttat
    16141 caatcattcc aggtaaatcc ccaataccat cgtgattact atcattaaaa cttcttggat
    16201 atacttgata tgctactgct tctttccacc attgcttatt cattttaaaa ctcctttgct
    16261 atcgctgtgt tgattttctt atttttaatt ctgtatctat aatgacgagt tcaataacat
    16321 cctgtgcttt attttttaat atatttaaaa ttgctgcacc agcctgttga cctaacattc
    16381 gaggcttgat gtcaatacag gtttgaggtg gtgacgcaat ttcggttaaa taagaatcat
    16441 tgaacgttgc tgtcattaca tctttcggaa tttcaatatt aagttcatat aggacactta
    16501 aaatcgctaa atgtaacata gcatctaacg aaatgattgc ctgtttaata tttgggtcct
    16561 tcaaacgcgt atgtagattt tgcatgtaat taaaaataac ttctctttca ttactagtct
    16621 caataatttg ataattaatt ttattttgag aagctatcgt ttcaaatcct tgaatcctgt
    16681 ctttcgaaac ttcaaaatcg cctttttctg taataaatat taattcatct acaccttgtt
    16741 caataacatg tcgtgtcaaa ttttcagaag ctaatatatt atcattatct atgtgtgtaa
    16801 attgatgatc tatatccgat gtaggtttac caatcacaat aaatggcatg ttttcatcaa
    16861 ttaacatttg tttaatcgga tcattttctt ttgaatagag cagtataaac gcatcaacca
    16921 ttcgttgttt aatcatttta taaacttcat tcattaaatc attcatatta tttgagactg
    16981 tcgtttgtgt accatagcca tgctggttgc acgtttcaga aatccctagc aatacattga
    17041 tgtagaatgg attcagtcga ataggctcct cagaaccttt taacactaaa ccaattttat
    17101 atgtttggtt tgtaattaaa gttctagcag cggtattagg aaaataattc aattcttcca
    17161 taactttctt cacttttgaa attgtcgctt cgctaatacg ttgatttcct tttataactc
    17221 ttgaaactgt cgaaggagaa acaccggctt ttagtgcaac atctttaatc gtaaccattt
    17281 aatcacctcc tgttaatctc tgtattggaa aacgcttcca atccctgtat aatatcagtt
    17341 tagtcacact ttctaaaaaa gtcaaaagat ttgtgcaaac gattgcataa aacgataaaa
    17401 ataaaacctt catactgaaa ttcaatccga aaatcaatat aaaggtttgt ataaatatta
    17461 aaatcgattg tttagtcact aactgcaaaa tagttacctt ggccatcttg gaaattaaat
    17521 acacgtcgac cattcatttc tgctatatca tgcccagtta aacctaaatc atttaatttt
    17581 gagtataatg catcaaagtt tttctcttta aacattaaag atggtgttcc taggttcacc
    17641 tccgggctat acttttcaat aaattctttt gccataatcg tcaatgacgt ttcagcatct
    17701 ttcgtaggtg atacttcaac tgcaacatag tcctcagcta acggtgtttc acttacaaca
    17761 acaaattcta aagtttctgt ccaaaatgct ttcgcttttt caacatcatc aacatataac
    17821 ataacttgat ttaacttttc cataaaatag tacctctatt tctctatagt acatgctatc
    17881 ataacacagt aaatatttta ttacttcaca aaatgcttaa aaatatggca ggatgatttt
    17941 acggtcaaag ataatacttg tgtaattttt tataggttgt atctactcta tcacactctt
    18001 ttttatatta atcaaaagat ataaaaaagg atagtatctt tcaactatcc tttagtcaat
    18061 attattcttc aatccattgt gtatggaata cgccttcttt atcttttctt tcgtacgtgt
    18121 gagcaccgaa gtagtcacgt tgtgcttgaa ttaagtttgc aggtaaatca gctgcacggt
    18181 aactatcata gtaattaata cttgatgaga aaccaggtgt tggtacacca ttttgaacac
    18241 cagttgcgac aacatcacgt aacgcatctt gatattcagt aactatgttt ttaaagtaag
    18301 gatctagcaa taagttttgt aatcctggat tattatcgta agcatctttg atcttttgta
    18361 agaattgtgc acggataatg caaccttctc tccaaatcat agctaaatca ccaagtttta
    18421 aattccattc attatcttca cttgctttac gcatttgcgc gaaaccttgt gcataagaac
    18481 aaattttact catatataat gctttacgaa ttttttctaa aaagtctttc ttgtcaccat
    18541 caaatgatgc ttttggacca tttaattctt tagaagcatt tacgcgctct tctttgattg
    18601 aagagataaa acgtgcaaat acagattcag taatgattgt taatggaata cctaattcta
    18661 atgcgttaat tgaagtccat tttcctgtac ctttttgacc tgcagtatca agaatttttt
    18721 caactaatgc ttctttattt tcatctaatt tcatgaaaat atcaccagtg atttcaatta
    18781 aataactttc taattcacca gcattccagt ctttgaacgt ttgagcaatg tcttcatgag
    18841 acatgcctaa taattctttc atcatagcat aactttctgc aattaattgc atgtcagcat
    18901 attcgatacc attgtgtacc attttcacat agtgtccagc accattaggt ccaatataag
    18961 taacacatga agcaccgtct tttgcctttg cagcaattgc atcaagaata tctgcaactt
    19021 tgttataagc ttcttcttgt ccacccggca ttaatgacgg accagttaac gctccaattt
    19081 caccaccaga aacgcccata ccaataaagt tgattgcact ttgtgctaat gctttattac
    19141 gtctgatagt atcttgatag tttgtattac caccatcaat taaaatatct ccatcatcta
    19201 ataaaggtaa caaactatca atcgttgcat ccgtagcttt acctgcttga accattaata
    19261 aaattttacg tggtttttct aaagaattaa caaattcttc caatgagtac gttggatgaa
    19321 tatttttccc ttttgattct tcaaccatta aatcagtttt ttcacttgag cggttaaata
    19381 cagatacact atatccgcgt gattcaatat tccaagctag gtttttaccc ataacggcta
    19441 aaccaataac tccaatttgt tgtgtcatat tacttacctc acttgttgat ttttcattag
    19501 tattgtatca caaaatagac atacactaca ctaaatcatt tcgattgtcg cgcaactatt
    19561 ttgattattt ctaacacttg acttgcaagc aagttcaatg atttaatcgg cattctctca
    19621 tttgttgtat ggattttttc ataacccact cctaaaatga ctgaaggaat accaaatgta
    19681 ttaataatac tgccgtctga accgccacca gaaataattg tatttgcaga taatcctaaa
    19741 ttacgagcac tttcttgtgc aattttaaca accgtttcat tatcattaat tttaaatcct
    19801 ggataacttt gctccactgt aactactgct ttcccaccta attctgatgc agttgtttca
    19861 aacacatcag tcatatgttt gacttgtgtt tttattcttt ctggatcgtg agaacgtgcc
    19921 tctgcttcta aaatgacttc atctgcaaca atattcgtag ctgaaccgcc atgaaactta
    19981 ccaatattgg cagtagttat ttcatcaact tgtcctaatt tcattcgact aattgctttc
    20041 gccgcaatat taatagcact aacaccctct tttggcgtac ttgcatgagc cgttttgcca
    20101 aaaattttag ctgaaattaa catttgcgtc ggtgcaccta caaccgttgt accgacatca
    20161 gcacttgcat caatagcata accaaagtcc gcgtccaaca actctgaatt taattcttta
    20221 gcaccaatta aacctgattc ttctccaaca gtaatcacaa attgaatttg tccatgtggg
    20281 atttgttgtt cctttatcac ttgcaaaact tcaagcatag ctgctaatcc tgctttatca
    20341 tctgcaccta gaatagtcgt accgtcagag tatatgtagc cgtcatcttt tacaattggc
    20401 tttacattaa ttgcgggtac aacagtatcc atatggctcg tcaaatataa tttaggtact
    20461 tcgccttctt cgatagtact tttcattgta cacactagat tattggcacc taatttcgga
    20521 tgtttagccg cttcatcttc tttaacatct aaccctaatg ctatgaattt ttcttttaaa
    20581 ataggttgga ttgttgattc attccctgtc tcagaatcga tttgtacaag ttctaaaaac
    20641 gtattaagta atctttcctc attaatcata atggaacccc ttttatcaaa attttcaagt
    20701 acgccaaacg gtaaaaattg atgaaataaa atgttac
//
LOCUS       DALMNS010000043        20551 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.043, whole genome shotgun sequence.
ACCESSION   DALMNS010000043 DALMNS010000000
VERSION     DALMNS010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20551)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20551)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20551
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.043"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..623)
                     /locus_tag="O6Y56_001333"
     CDS             complement(<1..623)
                     /locus_tag="O6Y56_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDB5574588.1"
                     /translation="MFKVVICDDERIIREGLKQIIPWGDYHFNTIYTAKDGVEALSLI
                     QQHQPELVITDIRMPRKNGVDLLNDIAHLDCNVIILSSYDDFEYMKAGIQHHVLDYLL
                     KPVDHAQLEVILGRLVRTLLEQQSQNGRSLASCHDAFQPLLKVEYDDYYVNQIVDQIK
                     QSYQTKVTVSDLIQHIDVSESYAMRTFKDHVGITIVDYLNRYRILQSL"
     gene            complement(616..2172)
                     /locus_tag="O6Y56_001334"
     CDS             complement(616..2172)
                     /locus_tag="O6Y56_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDB5574589.1"
                     /translation="MTAYKPYRHQLRRSLFASTIFPVFLVIIIGLVSFYAIYIWIEHR
                     TIHQHVDESQSSLHHTEKQIQTFITQHNNSFQELDLTNHHDVTATKRELLKLIHQQPA
                     TLYYELSGPNQFITNNYEHLNTKNMYLFSTHQLKFKNSTYMLKIYMANTPRLSEIKKD
                     SRQFALIVDQYDNILYANDDRFTIGEKYRPQQFGFMNESVKLNHADHRLIIYKDIHEN
                     IEDGITLLIVMAVVLVLLVIFGFISADNMAKRQTKDIETIIQKIYYAKNRHLGTYTPL
                     KNNSELEEINNYIYDLFESNEQLIHSIEHTERRLRDIQLKEIERQFQPHFLFNTMQTI
                     QYLITLSPKLAQTVVQQLSQMLRYSLRTNSHTVELNEELNYIEQYVAIQNIRFDDMIK
                     LHIESSEEARHQTIGKMMLQPLIENAIKHGRDTESLDITIRLTLARQNLHVLVCDNGI
                     GMSSSRLQYVRQSLNNDVFDTKHLGLNHLHNKAMIQYGSHARLHIFSKRNQGTLICYK
                     IPLSRGNVDV"
     gene            complement(2169..3137)
                     /locus_tag="O6Y56_001335"
     CDS             complement(2169..3137)
                     /locus_tag="O6Y56_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDB5574590.1"
                     /translation="MKSKIYILLLFLIFLSACANTRHSESDKNVLTVYSPYQSNLIRP
                     ILNEFEKQEHVKIEIKHGSTQVLLSNLHNEDFSERGDVFMGGVLSETIDHPEDFVPYQ
                     DTSVTQQLEDYRSNNKYVTSFLLMPTVIVVNSDLQGDIKIRGYQDLLQPILKGKIAYS
                     NPITTTTGYQHMRAIYSMHHRVSDVHQFQDHAMQLSKTSKVIENVAKGKYYAGLSYEQ
                     DARTWKNKGYPVSIVYPIEGTMLNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRLVA
                     EFDAKSIRKDVSEQSDQSIENLKNIPLIPKSKLPDIPHHKFLEMIQ"
     gene            3725..5974
                     /gene="pflB"
                     /locus_tag="O6Y56_001336"
     CDS             3725..5974
                     /gene="pflB"
                     /locus_tag="O6Y56_001336"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HDB5574591.1"
                     /translation="MLETNKNHATAWQGFKNGRWNRHVDVREFIQLNYTLYEGNDSFL
                     AGPTEATSKLWEQVMQLSKEERERGGMWDMDTKVASTITSHDAGYLDKDLETIVGVQT
                     EKPFKRSMQPFGGIRMAKAACEAYGYELDEETEKIFTDYRKTHNQGVFDAYSREMLNC
                     RKAGVITGLPDAYGRGRIIGDYRRVALYGVDFLMEEKMHDFNTMSTEMSEDVIRLREE
                     LSEQYRALKELKELGQKYGFDLSRPAENFKEAVQWLYLAYLAAIKEQNGAAMSLGRTS
                     TFLDIYAERDLKAGVITESEVQEIIDHFIMKLRIVKFARTPDYNELFSGDPTWVTESI
                     GGVGIDGRPLVTKNSFRFLHSLDNLGPAPEPNLTVLWSVRLPDNFKTYCAKMSIKTSS
                     IQYENDDIMRESYGDDYGIACCVSAMTIGKQMQFFGARANLAKTLLYAINGGKDEKSG
                     AQVGPNFEGINSEVLEYDEVFKKFDQMMDWLAGVYINSLNVIHYMHDKYSYERIEMAL
                     HDTEIVRTMATGIAGLSVAADSLSAIKYAQVKPIRNEEGLVVDFEIEGDFPKYGNNDD
                     RVDDIAVDLVERFMTKLRSHKTYRDSEHTMSVLTITSNVVYGKKTGNTPDGRKAGEPF
                     APGANPMHGRDQKGALSSLSSVAKIPYDCCKDGISNTFSIVPKSLGKEPEDQNRNLTS
                     MLDGYAMQCGHHLNINVFNRETLIDAMEHPEEYPQLTIRVSGYAVNFIKLTREQQLDV
                     ISRTFHESM"
     gene            5997..6752
                     /gene="pflA"
                     /locus_tag="O6Y56_001337"
     CDS             5997..6752
                     /gene="pflA"
                     /locus_tag="O6Y56_001337"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase-activating protein"
                     /protein_id="HDB5574592.1"
                     /translation="MLKGHLHSVESLGTVDGPGLRYILFTQGCLLRCLYCHNPDTWKI
                     SEPSREVTVDEMVNEILPYKPYFDASGGGVTVSGGEPLLQMPFLEKLFAELKENGVHT
                     CLDTSAGCANDTKAFQRHFEELQKHTDLILLDIKHIDNDKHIRLTGKPNTHILNFARK
                     LSDMKQPVWIRHVLVPGYSDDKDDLIKLGEFINSLDNVEKFEILPYHQLGVHKWKTLG
                     IAYELEDVEAPDDEAVKAAYRYVNFKGKIPVEL"
     gene            7088..8851
                     /locus_tag="O6Y56_001338"
     CDS             7088..8851
                     /locus_tag="O6Y56_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphoryl diester phosphodiesterase
                     membrane domain-containing protein"
                     /protein_id="HDB5574593.1"
                     /translation="MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLILL
                     FNMMLKVAGQSQLTINNWTEIVSHPASVILLIIFILSVAFLIYVEFSLLVYMVYAGFD
                     RQIIPFKSIFKNAFVNVRKLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLT
                     EELMKTTKGIIIYGTFMIAVFILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFR
                     LVIEIVILELIIGAILTLIISGATYLAICVDEEGDKFLVSSILFVVLKSSLFFYYLFT
                     KLSLISVLVLHLKQENVLDQPGLEFKYPKPKRKSRFFIISMVLAVTCFIGYNMYLLYN
                     NTINTNISIIGHRGFEDKGVENSIPSLKAAAKANVEYVELDTIMTKDKQFVVSHDNNL
                     KRLTGVNKNISESNFKDVVGLKMRQNGHEAKLVSLDEFIETAKQSNVKLLVELKPHGK
                     EPADYTQRVIDILKKHGVEHQYRVMSLDYDVMTKLKKEAPYLKCGYIIPLQFGHFKET
                     SLDFFVIEDFSYSPRLVNQAHLENKEVYTWTINGEEDLTKYLQTNVDGIITDDPALAD
                     QIKEEKKDETYFDRSIRILFE"
     gene            complement(9015..9359)
                     /locus_tag="O6Y56_001339"
     CDS             complement(9015..9359)
                     /locus_tag="O6Y56_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement inhibitor SCIN family protein"
                     /protein_id="HDB5574594.1"
                     /translation="MTTQMKIKTYLVAGIKAALLDTTGIKLASKSETTSHTYQHQALV
                     DQLHELIVNTDLNKLSYLNLDAYQKRDILAAHYIAKSAIRTKNLDQMTKAKHRLESIC
                     DSISNPLHSQNN"
     gene            9549..11612
                     /gene="coa"
                     /locus_tag="O6Y56_001340"
     CDS             9549..11612
                     /gene="coa"
                     /locus_tag="O6Y56_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001597527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylocoagulase"
                     /protein_id="HDB5574595.1"
                     /translation="MKKQIISLGALAVASSLFTWDNKADAIVTKDYSGKSQVNAGSKN
                     GKQIADGYYWGIIENLENQFYNIFHLLDQHKYAEKEYKDAVDKLKTRVLEEDQYLLER
                     KKEKYEIYKELYKKYKKENPNTQVKMKAFDKYDLGDLTMEEYNDLSKLLTKALDNFKL
                     EVKKIESENPDLRPYSEREERTAYGKIDSLVDQAYSVYFAYVTDAQHKTEALNLRAKI
                     DLILGDEKDPIRVTNQRTEKEMIKDLESIIDDFFIETKLNRPQHITRYDGTKHDYHKH
                     KDGFDALVKETREAVSKADESWKTKTVKKYGETVTKSPVVKEEKKVEEPQAPKVSEKV
                     DVQETVGTTEEAPLPIAQPLVKLPQIGTQGEIVKGPDYPTMENKTLQGEIVQGPDFPT
                     MEQNRPSLSDNYTQPSLTNPILEGLEGSSSKLEIKPQGTESTLKGIQGESSDIEVKPQ
                     ATETTEASQYGPRPQFNKTPKYVKYRDAGTGIREYNDGTFGYEARPRFNKPSETNAYN
                     VTTHANGQVSYGARPTQNKPSETNAYNVTTHANGQVSYGARPTQNKPSETNAYNVTTN
                     QDGTVSYGARPTQNKPSKTNAYNVTTHANGQVSYGARPTQNKPSETNAYNVTTHANGQ
                     VSYGARPTQNKPSETNAYNVTTHGNGQVSYGARPTQNKPSKTNAYNVTTHADGTATYG
                     PRVTK"
     gene            complement(11794..11901)
                     /locus_tag="O6Y56_001341"
     CDS             complement(11794..11901)
                     /locus_tag="O6Y56_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574596.1"
                     /translation="MCVRTRLVSSSSVRLSKAIIIAVIVVCHIDVRGLF"
     gene            complement(12195..13379)
                     /locus_tag="O6Y56_001342"
     CDS             complement(12195..13379)
                     /locus_tag="O6Y56_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HDB5574597.1"
                     /translation="MQEAYIVAYGRSAAAKAKQGALFHERPDDVAAKVLQGVLKRIDG
                     KFNKNMIEDVIVGTAFPEGLQGQNIARTIALRTGLSDTVPGQTVNRYCSSGLQTIAIA
                     ANQIMAGQGDILVAGGVELMSAVPMGGNEPTNNPTLQYDDIGASYPMGLTAENVASQF
                     DVSREDQDAYAVRSHQRAYDAQRDGRFKDEIIPIQVNSVEYTNTGPKVHTNIFDQDEF
                     IRPDTTMEALAKLRTVFKADGTVTAGTSAPLSDGAGFVVLMSGDKVKELGVTPIARFV
                     GYKAVGVDPKIMGIGPAYAIPEVLSLSNLSVEDIDLIELNEAFASQTIASIKEVGLDI
                     SRTNVNGGAIALGHPLGATGAMLTARLLNEMGRRPDSRYGMVTMCIGVGMGAAAIFEY
                     VR"
     gene            complement(13409..15670)
                     /locus_tag="O6Y56_001343"
     CDS             complement(13409..15670)
                     /locus_tag="O6Y56_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA
                     hydratase family protein"
                     /protein_id="HDB5574598.1"
                     /translation="MTINKVTVLGAGTMGAQLAALFVNAGLKVKLLDIVVDKNDPNLI
                     AKKSYDKITDKKRPLLFDLNLASHLTYGNFDDDLVNDDADLYIEAVKEDIEIKHAVWQ
                     QVLQHAKEDALFATNTSGIPINAIAQAFNEKDQERFFGLHFFNPPRIMKLVELIPTSH
                     TKESIILDVKNFAQNVLGKGVIVVNDVPGFVANRVGTQTMNDIMYRAEQHKLSIVDVD
                     ALTGQAIGRPKTGTYALSDLVGLDIAVSVIKGMQQVPEETPYFHDVKIVNTLFENGAL
                     GRKTKQGFYKKDKETKARLVYDVEKQDYVPVSQPQLPILNEFNKDLVHNLDVIFNAQD
                     EAGLFLWETLRNNFYYSAINVPKATDDFRDIDRALVWGFNWKLGPFQLWDAMGYERVK
                     TRMEDELGDLPQWISDLDGGFYKQDETIEYATPVSHFVKDELWDKGDAKLSVTHDDQL
                     LLKLQSKNNVITDEFNDALVDAIDLLENDHYTSMVIYADGNNFSVGANLFLMKKAHED
                     GLVDDVVAQSIDKLHYSFNRLKYSLKPVVTAVQGRALGGGCELVLYSPIVVAASETYI
                     GLVEAGVGLLPSGGGLAEMADRILRTSHKFDDKQASMTKVLTNIAFAKVSTNAFEARR
                     YGYLRDTDTIIFNTAQRVEVALKRAKYEAETNYIPNPRHQYIALGEDFKALIQGQLDA
                     QRRGHFISDHDYHIALNIATILAGGDLPRNTFINQRYIQSLEKIGFIDLLKSKKSYER
                     IAHMLKTGKPLRN"
     gene            complement(15856..17067)
                     /locus_tag="O6Y56_001344"
     CDS             complement(15856..17067)
                     /locus_tag="O6Y56_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HDB5574599.1"
                     /translation="MTFEKETVLKTLFPEDVLSIAKGLTDGEVEFLQQVDSLLESKYR
                     ENINQHWIDATVPEDYFKDLGELNYFNNPLLYKDRPNAKMPSQLFQFFMSYLLARFDI
                     SLATLLGVHQGLGHNTFYFGGSKEQIAKYVPKLQSHELRTCFALTEPEHGSDVAGGLE
                     TVAERQGDTWVINGEKKWIGGAHVSDVIPVFAVNKETGKPHCFVVRPEQDGVDIEVID
                     NKIALRIVPNALIKLTNVKVDEADRLQNITSFKDIAKILYSTRAGVAYMATGGMAGAL
                     RATLDYVTERKQFGKPISKYQLIQEKLAMMQGNLAQAMATCAQLANMQAHGEYDEVAT
                     STAKMMNALRLRETVAMGRGITGGNGILADDYDIARFFSDAEAIYTYEGTHEINALVI
                     GRALTGDSAFV"
     gene            complement(17179..18684)
                     /locus_tag="O6Y56_001345"
     CDS             complement(17179..18684)
                     /locus_tag="O6Y56_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl--CoA ligase"
                     /protein_id="HDB5574600.1"
                     /translation="MNFDWIKTRSDFDDDKPAVIDHAKQTSWTYQQLNARADNMAHYL
                     TSQGVKKGDVIGIFAPNDIAILDLLFACFKTGAVFLPLNWRLNPKEIAAIVEDAQLKL
                     LFYAEKHLSSLTDIDQNLLHMDIDVAQYDEIVNPDYHQPFQATPVEPQDLAALIYTSG
                     TTGSPKGVMFSYESFVHNGANLELTYKFNSNYITIVSTPMFHVLGFNDTVLPVLMSGG
                     TLILQRYFNGEELNNMIEQYHPTFIIMIPTMYYSTLRASNFNPENFKAMDYIIQGGSQ
                     PLPSIQAAFKQYGINIINGYGLTEAPLVLVNTPENSKRKPMSIGKAVMFVDARILDDN
                     GEEVPSGEIGELAIKAKNVTPGYWNKPAETAKAFHGRYLLTGDLAKMDDDGDIFIIDR
                     KKELIITGGENVLPSEVENALAEHPLVDRCVVVGYDHPKYGESIAAAIILREDEPHYA
                     EILDQHMRSRLAGYKVPRMYVPVTHMPLNSTQKPDKLAIRQMMNDKVSQTL"
     gene            complement(18710..20287)
                     /locus_tag="O6Y56_001346"
     CDS             complement(18710..20287)
                     /locus_tag="O6Y56_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl CoA:acetate/3-ketoacid CoA transferase"
                     /protein_id="HDB5574601.1"
                     /translation="MEVTCLKQITWHDLQHIIKDGDVIGLPALAVANLPAEVLRAVLA
                     QHDTYHTPNDLTFILANDIHSLGAAPDLDDFIERRMIKRVIMSILTASSKTAQAMKNN
                     DIEAYFLPQGIIATHYRQSNQLLPGVITKIGLNTAVDPRYGGGKVNTRTTDDLVSLVT
                     INDETYLHYTFPSVDVALLRGTYADQQGNIYLTQEAYLSECYHVALNTKANHGKVIVQ
                     VKDLVDDYQLKPNEVVIPGNLVDYVYVTEDEKNHRQVIQSHYLPALSGEERIDGIPET
                     ALPFNSRKLILRRAAQFLTYGDTISIGYGINNELSNLLHEECVEHDVQPILDVGIFGG
                     FVGSREHFGMNYNADVRMPHDRAWDFIYNNGVSVAYLSFAEVDQYGNVNVSYFNDRLN
                     GCGGFIDITQSVNKIIFSGTFVAGSHVSCHNQRLNIETEGQNQKFVSDVSHIDFNARY
                     SQSLEQEVYFVTDRSVFELTNQGLKLIEIAPGLDLHKDILNQMAFKPIIADHLKLIDT
                     SIYKEKWGQLKQSIHKV"
BASE COUNT         6802 a         3600 c         3612 g         6537 t
ORIGIN      
        1 agagattgta aaatacgata gcgatttaaa taatcgacaa ttgtaatacc aacatgatct
       61 ttaaatgttc gcatcgcata cgattcacta acatcgatat gttgaattaa atctgaaaca
      121 gtcactttcg tttgataaga ttgcttaatt tgatcaacaa tctgattcac ataataatca
      181 tcgtattcta cttttaataa tggttggaag gcatcatgac aagatgctaa gctacggccg
      241 ttctgtgatt gttgctctaa taaggtacgg acaagtcttc ctaaaataac ttctaattgt
      301 gcatggtcta ctggttttaa taaataatca agaacatgat gttgaatgcc ggctttcata
      361 tattcaaagt catcgtaact cgataatatg atgacattac aatctagatg tgcaatatca
      421 ttgagtaaat cgacgccatt tttacgtggc atacgaatat cagtaattac taattctggc
      481 tgatgttgtt gaattagtga taatgcttca acaccatctt tagcagtgta tattgtattg
      541 aaatgatagt ctccccaagg aatgatttgc tttaaacctt ctcgaataat tcgctcatca
      601 tcacaaataa ctaccttaaa catctacatt cccccttgaa agtggtattt tataacaaat
      661 taacgtacct tgattacgct ttgaaaaaat atggagtcgt gcatgtgaac catattgaat
      721 cattgcttta ttgtgtaaat gatttaatcc caaatgctta gtatcaaata catcattatt
      781 aagagattgg cgtacatatt gcaggcgaga tgacgacatc ccaataccat tgtcgcaaac
      841 taaaacatgt aaattctgac gtgccaatgt caggcgtata gtaatgtcca atgactcagt
      901 atctctacca tgtttaatag cattttctat gagtggctga agcatcattt taccaattgt
      961 ctggtgacgc gcttcttcag aactttcgat atggagctta atcatgtcat cgaaacggat
     1021 gttttgtatc gcaacatact gttcaatgta gttcaactct tcgtttaatt ccactgtatg
     1081 tgagtttgta cgtaatgagt aacgtaacat ttgagataat tgttggacca cagtttgtgc
     1141 taatttcgga gataacgtaa ttaaatattg tattgtttgc atcgtattga ataggaaatg
     1201 aggctggaat tggcgttcta tttcctttaa ctgaatatca cgcaagcgac gttctgtatg
     1261 ctcgatagaa tggatcagtt gctcatttga ttcaaataaa tcgtaaatat aattattaat
     1321 ttcttctagt tcactgttgt tttttaaagg cgtatatgta cctagatgac gatttttggc
     1381 atagtaaatt ttttgaataa tcgtttcgat atcttttgtt tgtcgtttag ccatattatc
     1441 tgcgctaatg aaaccaaata ttactagtaa aacaagaact acagccataa caattaacaa
     1501 cgtgatacca tcttcaatgt tttcatggat atctttataa ataatgagac gatggtcagc
     1561 atggtttaat tttacagatt cattcataaa tccgaattgt tgaggtctat acttttcacc
     1621 tatagtaaaa cggtcatcgt tggcgtataa aatattgtca tattgatcaa cgataagtgc
     1681 gaattgtcgg ctatctttct taatttcact taaacgtggg gtgttagcca tataaatttt
     1741 aagcatatat gtactatttt tgaacttaag ctgatgcgtt gaaaataaat acatattttt
     1801 agtgtttaaa tgttcataat tattggttat aaactgattt ggtccagata actcataata
     1861 aagtgttgcg ggctgttggt gtattaattt taataattca cgttttgtag cggtaacatc
     1921 atgatgattt gttaaatcga gctcttgaaa cgaattatta tgctgtgtaa taaatgtctg
     1981 aatctgcttt tcagtatgat gtaaagatga ctgactttca tcaacatgtt gatgaatcgt
     2041 acgatgctca atccaaatat aaatggcata gaagcttact agtccaataa taatgactaa
     2101 aaatactggg aaaatagtag acgcaaataa cgatcgtctc aattgatgtc tataaggttt
     2161 gtatgccgtc attgaatcat ctccaaaaat ttatgatgcg gaatgtccgg taatttagat
     2221 ttcggtatta aaggtatgtt cttaagattt tcgatagact gatcgctttg ttcactaaca
     2281 tcctttcgaa ttgacttggc atcaaactct gcaactaatc gttgttgtac tgagcggctt
     2341 gttaaatatt gcactaactt tttacgctta ggatgagggt gtgcattttt aactaaagca
     2401 ataccatcaa catttaacat tgttccttca attggataaa cgattgatac aggataacct
     2461 ttgtttttcc atgttcgtgc atcttgttcg tagcttagac ctgcgtaata tttaccttta
     2521 gcaacatttt caatgacttt agacgtcttt gacagttgca tcgcgtggtc ttggaattga
     2581 tgcacatcac ttactcgatg atgcatgcta taaatagcgc gcatatgttg atagcctgtc
     2641 gttgttgtaa ttggatttga gtacgcaatt ttacctttaa gtataggttg taataaatct
     2701 tgataacctc gaatcttaat atctccttgc aaatctgaat taacaactat aactgttggc
     2761 attaatagaa aactagtaac atatttattg ttcgagcgat aatcctctaa ttgctgtgtt
     2821 acagatgtat cttgataggg aacaaaatct tctggatgat caattgtttc tgataacaca
     2881 ccacccataa agacatcacc acgctccgaa aaatcttcgt tatgcaagtt tgaaagtagt
     2941 acttgagtag atccgtgttt aatttcaatt ttgacatgct cttgtttttc aaattcattt
     3001 aaaattggac gaatcaagtt tgattgatac ggagaataaa ctgttaatac atttttatct
     3061 gattcagagt gacgcgtatt agcgcatgct gataaaaaaa tgagaaataa tagcaagata
     3121 taaatttttg atttcatgat atcccatcaa ttctatgtat attttaatac aataatttta
     3181 gcaataaatg acgcataagt aatgttaaat atttagaaat gtttatagat gacttgttaa
     3241 gacgttgcaa atgttgtgat agcacataat ttttgtttgt caagacgact taccgaggct
     3301 gtaaaatcaa actgttatat tttatttgaa gctgttatat aaaaattggc aagatattga
     3361 acggttcaaa agtaaatttt tacgtcaata aaagtattta atcctgtctc ttcatatata
     3421 aaagtaaatc tctctaagta ttgatttaac gcttattaac aatcattttt tataaacaaa
     3481 tatatccacc taaattaact tttaaagcaa tgaaaatagt gaacattata actgttgtgt
     3541 aacagaatgc aattagcata ttactgttac acaaattagt acagtttcta tgttttgaca
     3601 tacatttgat gaaaattgta cataatttat gtgaaaaaaa tcacaacaaa catgctacaa
     3661 tgactatgaa aacgttaaca tagcatttca aattcacaac attatacaga tggaggcgtt
     3721 tagtatgtta gaaacaaata aaaatcatgc aacagcttgg caaggattta aaaatggaag
     3781 atggaacaga cacgtagatg taagagagtt tatccaatta aactacactc tttatgaagg
     3841 taatgattca tttttagcag gaccaacaga agcaacttct aaactttggg aacaagtaat
     3901 gcagttatcg aaagaagaac gtgaacgtgg cggcatgtgg gatatggaca cgaaagtagc
     3961 ttcaacaatc acatctcatg atgctggtta tttagacaaa gatttagaaa caattgtagg
     4021 tgtacaaact gaaaagccat tcaaacgttc aatgcaacca ttcggtggta ttcgtatggc
     4081 gaaagcagct tgtgaagctt acggttacga attagacgaa gaaactgaaa aaatctttac
     4141 agattatcgt aaaacacata accaaggtgt attcgatgca tattctagag aaatgttgaa
     4201 ctgccgtaaa gcaggtgtaa tcactggttt acctgatgca tacggacgtg gacgtattat
     4261 cggtgactat cgtcgtgtag ctttatatgg tgtagatttc ttaatggaag aaaaaatgca
     4321 cgacttcaac acgatgtcta cagaaatgtc agaagatgta attcgtttac gtgaagaatt
     4381 atcagaacaa tatcgtgcat taaaagaatt aaaagaactt ggacaaaaat atggtttcga
     4441 tttaagccgt ccagcagaaa acttcaaaga agcagttcaa tggttatact tagcatacct
     4501 tgctgcaatt aaagaacaaa acggtgcagc aatgagttta ggtcgtactt caacattctt
     4561 agatatctat gctgaacgtg accttaaagc aggtgttatt actgaaagcg aagttcaaga
     4621 aattattgac cacttcatca tgaaattacg tattgttaaa tttgctcgta cacctgatta
     4681 caatgaatta ttctctggag acccaacttg ggtaactgaa tctatcggtg gtgtaggtat
     4741 tgacggacgt ccacttgtta cgaaaaactc attccgtttc ttacactcat tagataactt
     4801 aggtccagca ccagaaccaa acttaacagt attatggtca gtacgtttac ctgataactt
     4861 caaaacatac tgtgcaaaaa tgagtattaa aacaagttct atccaatatg aaaatgatga
     4921 cattatgcgt gaaagctatg gcgatgacta tggtatcgca tgttgtgtat cagcgatgac
     4981 aattggtaaa caaatgcaat tcttcggtgc acgtgcgaac ttagctaaaa cattacttta
     5041 cgccatcaat ggtggtaaag atgaaaaatc tggtgcacaa gttggtccaa acttcgaagg
     5101 tattaacagc gaagtattag aatatgacga agtattcaag aaatttgatc aaatgatgga
     5161 ttggctagca ggtgtttaca ttaactcatt aaatgttatt cactacatgc acgataaata
     5221 cagctatgaa cgtattgaaa tggcattaca tgatacagaa attgtacgta caatggcaac
     5281 aggtatcgct ggtttatcag tagcagctga ctcattatct gcaattaaat atgcacaagt
     5341 taaaccaatt cgtaacgaag aaggtcttgt agtagacttt gaaatcgaag gcgacttccc
     5401 taaatacggt aacaatgacg accgtgtaga tgatatcgca gttgatttag tagaacgctt
     5461 tatgactaaa ttacgtagtc ataaaacata tcgtgattca gaacatacaa tgagtgtatt
     5521 aacaattact tcaaacgttg tatacggtaa gaaaactggt aacacaccag acggacgtaa
     5581 agctggcgaa ccatttgcac caggtgcaaa cccaatgcat ggccgtgacc aaaaaggtgc
     5641 attatcttca ttaagttctg tagctaagat tccttacgat tgctgtaaag atggtatttc
     5701 aaatacattc agtatcgtac caaaatcatt aggtaaagaa ccagaagatc aaaaccgtaa
     5761 cttaactagt atgttagatg gttacgcaat gcaatgtggt caccacttaa atattaacgt
     5821 atttaaccgt gaaacattaa tagatgcaat ggaacatcca gaagaatatc cacagttaac
     5881 aatccgtgta tctggttacg ctgttaactt cattaaatta acacgtgaac aacaattaga
     5941 tgtaatttct cgtacattcc atgaaagtat gtaacaaaat ttaaggtggg agcactatgc
     6001 ttaagggaca cttacattct gtcgaaagtt taggtactgt cgatggaccg ggattaagat
     6061 atatattatt tacacaagga tgcttactta gatgcttgta ttgccacaat ccagatactt
     6121 ggaaaattag tgagccatca agagaagtca cagttgatga aatggtgaat gaaatattac
     6181 catacaaacc atactttgat gcatcgggtg gcggtgtaac agtcagtggt ggcgaaccat
     6241 tgttacaaat gccattctta gaaaaattat ttgcagaatt aaaagaaaat ggtgtgcaca
     6301 cttgcttaga cacatcggct ggatgtgcta atgatacaaa agcatttcaa aggcattttg
     6361 aagaattaca aaaacataca gacttgatat tattagatat aaaacatatt gataatgaca
     6421 aacatattag attgacagga aagcctaata cacacatcct taacttcgcg cgcaaactgt
     6481 cagatatgaa acaacctgta tggattcgac atgtccttgt gcctggttat tctgatgata
     6541 aagacgattt aattaaacta ggggaattta ttaattctct tgataacgtc gaaaagtttg
     6601 aaattctgcc atatcatcag ttaggtgttc ataagtggaa aacattgggc attgcatatg
     6661 aattagaaga tgtcgaagcg cccgatgatg aagctgttaa agcagcctac cgttatgtta
     6721 acttcaaagg gaaaattccc gttgaattat aaatacaatt cagaccgaaa agaaagcata
     6781 tgtaacttca agagtgaagg ggcatatgct tctttttcaa ttgagtattg agtattagca
     6841 agacgtagta agtatatgag acaagtccta caatggttga aggaagacgt ttttgtaagt
     6901 agctatgctg ataaagaatg tgatgccttg ttaaaggtgg ggttccaata tcatcattta
     6961 gctgatgttg aatgggttat tatttgctac ttgcatatga atatgagtct tttcaaattt
     7021 ttattgaccc tgagtaatga aaaatattaa gatgaaactt aatattaaag caatgcggag
     7081 cgtgattatg aagagaatta gtaaagatat atgggcagta tttaaattac tgtatcaaaa
     7141 taaagggcgt tttagcatta atgccttact attgcagtta atcatgattt ttattagtag
     7201 tacatactta attttactat ttaatatgat gttaaaagta gctgggcaaa gccaacttac
     7261 gattaacaat tggacggaaa tcgttagtca tcctgccagt gtgatacttc ttattatatt
     7321 catattaagt gttgcctttc tgatttatgt agagttttca ttgttagttt atatggttta
     7381 tgccggcttt gatcgacaga ttattccatt taaatccatt tttaaaaatg cctttgtaaa
     7441 tgtgcgtaaa ctcataggtg taccagttat tttctttgtc atttatttaa tgttaatgat
     7501 acccattgcc aacctaggac taagttcagt attaacaaaa aatatttaca tacctaaatt
     7561 tttaacggaa gaacttatga aaacgacgaa aggtataatc atttacggta cctttatgat
     7621 tgctgtattt atattaaact ttaaattaat atttacttta ccgttaacga ttttaaaccg
     7681 tcagtcgtta tttaaaaata tgagactaag ttggcaaatt acgaagcgaa ataagtttcg
     7741 acttgttata gaaatagtta tattagaact catcattggt gcgattttaa cattaattat
     7801 ttcaggagca acatatcttg ctatttgtgt agatgaagaa ggagataagt ttttagtctc
     7861 atcaatttta tttgttgtat tgaaaagctc attgttcttc tattatttat ttacgaaatt
     7921 atcattaatc agtgtgttag tactgcactt aaaacaagag aatgtattag accaaccggg
     7981 cttagaattt aaatacccaa aaccgaaacg gaagtctagg ttctttataa tttcaatggt
     8041 gcttgcagtg acatgtttta tcggttataa catgtactta ctttacaata atactatcaa
     8101 tacaaatatc tccattattg gccatcgtgg tttcgaagat aaaggcgttg aaaattctat
     8161 tccgtcattg aaagctgctg caaaagcgaa tgtcgaatac gttgagttag atacaattat
     8221 gacgaaagat aaacaatttg ttgttagtca tgataacaat ttgaaacgtt taacaggtgt
     8281 taataaaaat atttctgaat ctaatttcaa agatgtcgtc ggtttgaaaa tgcgtcaaaa
     8341 tggacatgaa gcaaaacttg tatccttaga cgaatttatt gaaacggcta aacaatcaaa
     8401 tgtgaagcta ctagtagagt taaagccaca tggtaaagaa ccagcagatt atacacaacg
     8461 tgttattgat attttgaaaa agcatggtgt tgaacatcaa tatcgtgtga tgtcattgga
     8521 ttatgatgtg atgactaagt taaaaaaaga agcaccatat ctcaagtgtg gttatatcat
     8581 tccgttacag tttggccatt ttaaagaaac atctttagat ttctttgtca ttgaagattt
     8641 ttcttattcg ccaagacttg ttaatcaagc acacttggaa aataaagaag tctatacttg
     8701 gaccattaac ggcgaagaag atttaacgaa atatttacaa accaatgttg atggtattat
     8761 cacagatgac ccagcattag ctgatcagat taaagaagaa aagaaagacg aaacatattt
     8821 cgatcgttct ataagaatat tatttgaata atataaacaa agacctctaa agttatcaag
     8881 atgatacttt cagaggtctt tttaacgttg tcatctatgg gataggcaat cgtttcattc
     8941 gtttataatc atatgacaag tatttataag gcaatttggc gtcataaaca cttacatgat
     9001 ttattggtga attattaatt gttttgtgaa tgcaaagggt tagaaattga atcgcaaata
     9061 ctttctaatc tatgtttcgc tttagtcatt tgatccaaat ttttagtgcg tatagcagat
     9121 tttgcaatat agtgtgcagc taaaatatcg cgcttttgat acgcatctaa atttaggtac
     9181 gataatttat ttaagtcagt gtttactatt aattcatgta attgatctac aagcgcttga
     9241 tgttgatacg tatgtgatgt agtttcagat ttgcttgcta atttaatacc agtcgtatca
     9301 aggagcgccg ctttaatacc agcaactaaa tatgttttga ttttcatttg tgttgtcatg
     9361 ctttgttact cctttgatgt acattaatca aaaaaattat acactattgt atattgcaaa
     9421 gctaattaac tataacaaaa agatagttaa tgctttgttt attctagtta atatatagtt
     9481 aatgtctttt aatattttgt ttctttaatg tagattgggc aattacattt tggaggaatt
     9541 aaaaaattat gaaaaagcaa ataatttcgc taggcgcatt agcagttgca tctagcttat
     9601 ttacatggga taacaaagca gatgcgatag taacaaagga ttatagtggg aaatcacaag
     9661 ttaatgctgg gagtaaaaat gggaaacaaa ttgcagatgg atattattgg ggaataattg
     9721 aaaatctaga gaaccagttt tacaatattt ttcatttatt ggatcagcat aaatatgcag
     9781 aaaaagaata taaagatgca gtagataaat taaaaactag agttttagag gaagaccaat
     9841 acctgctaga aagaaaaaaa gaaaaatacg aaatttataa agaactatat aaaaaataca
     9901 aaaaagagaa tcctaatact caagttaaaa tgaaagcatt tgataaatac gatcttggcg
     9961 atttaactat ggaagaatat aatgacttat caaaattatt aacaaaagca ttggataact
    10021 ttaagttaga agtaaagaaa attgaatcag agaatccaga tttaagacca tattctgaaa
    10081 gagaagaaag aacagcatat ggtaaaatag attcacttgt tgatcaagca tatagtgtat
    10141 attttgccta cgttacagat gctcaacata aaacagaagc attaaatctt agggcaaaaa
    10201 ttgatttgat tttaggtgat gaaaaagatc caattagagt gacgaatcaa cgtactgaaa
    10261 aagaaatgat taaagattta gaatctatta ttgatgattt cttcattgaa acaaagttga
    10321 atagacctca acacattact aggtatgatg gaactaaaca tgattaccat aaacataaag
    10381 atggatttga tgctctagtt aaagaaacaa gagaagcggt ttctaaggct gacgaatctt
    10441 ggaaaactaa aactgtcaaa aaatacgggg aaactgtaac aaaatctcct gttgtaaaag
    10501 aagagaagaa agttgaagaa cctcaagcac ctaaagtttc tgaaaaagta gatgttcagg
    10561 aaacagttgg tacaactgaa gaagcaccat taccaattgc gcaaccacta gttaaattac
    10621 cacaaattgg gactcaaggt gaaattgtaa aaggtcccga ctatccaacg atggaaaata
    10681 aaacgttaca aggtgaaatc gttcaaggtc ctgatttccc aacaatggaa caaaacagac
    10741 catctttaag cgataattat actcaaccat cgttaacgaa ccctatttta gaaggtcttg
    10801 aaggtagctc atctaaactt gaaataaaac cacaaggtac tgaatcaacg ttgaaaggta
    10861 ttcaaggaga atcaagtgat attgaagtta aacctcaagc aactgaaaca acagaagctt
    10921 ctcaatatgg tccgagaccg caatttaaca aaacacctaa gtatgtgaaa tatagagatg
    10981 ctggtacagg tatccgtgaa tacaacgatg gaacatttgg atatgaagcg agaccaagat
    11041 tcaataagcc atcagaaaca aatgcataca acgtaacaac acatgcaaat ggtcaagtat
    11101 catacggagc tcgcccgaca caaaacaagc caagcgaaac aaacgcatat aacgtaacaa
    11161 cacatgcaaa cggccaagta tcatatggcg ctcgcccgac acaaaacaag ccatcagaaa
    11221 caaatgcata caacgtaacg acaaatcaag atggcacagt atcatatggc gctcgcccga
    11281 cacaaaacaa gccaagcaaa acaaacgcat ataacgtaac aacacatgca aatggccaag
    11341 tatcatatgg cgctcgtcca acacaaaaca agccaagcga aacgaacgca tataacgtaa
    11401 caacacatgc aaatggtcaa gtatcatacg gagctcgccc gacacaaaat aagccaagcg
    11461 aaacgaatgc atacaacgta acaacacacg gaaacggcca agtatcatat ggggctcgcc
    11521 cgacacaaaa caagccaagt aaaacaaacg catacaacgt aacaacacat gcagatggta
    11581 ctgcgacata tgggcctaga gtaacaaaat aaatttataa ctctatccaa agacatacag
    11641 tcaatataaa acattatgta tctttacaac agtaatcgtg cattctatga tgcttctaac
    11701 tgaattaaag catcgaacaa tcggaagcat atttctaaat tatttattca ttatagtctt
    11761 aaacataaca tgacctaata tattactaac ctattaaaat aaaccacgca catctatgtg
    11821 acatacgaca atcacagcaa taataattgc tttagaaagt cgtaccgaac tggaacttac
    11881 aagtctagtt cgaacacaca ctgatgtgag tggttttctt tattttaaat atgaacaatc
    11941 agataaatta ctagcattag caaatattat taaatcaaag gacttcgatt cataaaattt
    12001 aaaacaatga ttaaaattag acgtgtaaat gttaaattct aaaacggaaa tacccgctat
    12061 cctattaaac cactattttg ttcaatcact atatttcaca cagcttcaat aataaaacga
    12121 aactgcttca acccgtttca acttcagcct acttcaataa caaaacgaat ccgcttcatc
    12181 caaaatcaac cattctaacg cacatattca aatatagcag ctgcacccat accgacacca
    12241 atacacatcg taaccatgcc gtaacgacta tcgggacgtc tacccatttc attaagtaaa
    12301 cgcgcggtta acattgcccc tgtagcacct aatggatgac ctaaagcaat agcgccacca
    12361 ttcacattcg tacgtgatat atctagacct acttctttaa tagatgcaat cgtttgagaa
    12421 gcaaatgctt cgttcaattc gatcaaatca atgtcttcaa cagatagatt gctgagtgac
    12481 aatacttcag gaatcgcata tgcaggccca atacccataa ttttcgggtc aacgcctact
    12541 gccttataac caacgaatcg tgcaataggt gtcacgccga gttctttcac tttatctcca
    12601 gacattaaaa ctacaaatcc tgcaccatca gaaagtgggg cagatgttcc tgcagtcaca
    12661 gtgccgtcag ctttaaatac tgtacgtaat ttggctagtg cctccatcgt ggtgtcaggt
    12721 cgtataaatt catcttggtc aaagatattt gtgtgtactt ttggtcctgt gtttgtatat
    12781 tcaactgagt ttacttgtat tggaataatt tcatctttga accgaccatc acgttgtgcg
    12841 tcataggcac gttgatgact tctgacagca taagcatctt gatcttcgcg tgatacgtca
    12901 aattgggatg ctacattttc agcagttaag cccataggat atgacgcacc tatatcatca
    12961 tattgtaagg taggattgtt tgtgggctcg ttgccaccca ttggtacggc actcatcaat
    13021 tcaacgccac cagctacaag tatatctcct tgaccagcca taatttgatt ggctgcaatc
    13081 gcgatggttt gtaatcctga tgagcagtag cgattcactg tttgacccgg taccgtgtca
    13141 gataatcccg tacgcaatgc aatcgttcgt gcaatgtttt gtccttgtaa tccttctgga
    13201 aaagccgtac caacaatgac atcttcaatc atattcttat tgaattttcc gtcaatacgt
    13261 ttcaatacgc cttgtaatac tttggctgcg acatcatcag gtctttcgtg gaataatgcg
    13321 ccttgctttg ctttcgctgc ggctgaacgc ccataagcaa caatgtatgc ttcttgcatg
    13381 gttatcatcc tctcttaatg actatctttt aattacgtaa tggcttacca gtttttaaca
    13441 tatgcgcaat tctttcatat gattttttag attttagtaa gtcaataaag ccaattttct
    13501 ccaacgattg aatgtaacgt tgattgataa atgtatttct tggtaaatca ccacccgcta
    13561 aaattgtggc gatatttaag gcgatatgat aatcatggtc gctaataaaa tgaccccgtc
    13621 tttgcgcatc taattgtcct tggatcaatg ctttgaagtc ttcgcctaaa gcgatatatt
    13681 gatgtctagg attcggaata tagtttgttt ctgcttcata tttcgcacgt ttgagcgcaa
    13741 cttcgacacg ttgtgctgta ttgaaaataa tcgtatctgt atcacgtaaa taaccataac
    13801 ggcgtgcctc aaaggcattt gtagagactt tcgcaaatgc gatatttgtc agtacttttg
    13861 tcatggaagc ttgtttgtca tcaaacttat gcgatgtgcg taatatgcga tcagccattt
    13921 ctgcaaggcc accgccactc ggtaataagc caacacctgc ttcaacaaga ccgatatatg
    13981 tttcacttgc agcgacaaca ataggtgagt aaagtacaag ctcacagcca ccgcctaagg
    14041 cacgaccttg aacagctgtg actactggtt tcaaactata cttcaaacga ttaaagctat
    14101 aatgtaattt atcaattgat tgtgcaacga catcatctac aagaccgtct tcatgcgcct
    14161 ttttcattaa gaaaagatta gcacccacac tgaaattatt accatctgca taaataacca
    14221 tacttgtgta atggtcattt tccagtaaat caatcgcatc aactaacgca tcgttgaatt
    14281 catcggtaat gacattgttt ttactttgta atttcagtag cagttgatca tcatgagtta
    14341 cggaaagttt ggcatcacct ttatcccaaa gttcatcttt tacgaagtga gaaacaggtg
    14401 ttgcatattc gatggtctca tcttgtttat aaaagccacc atctaaatca ctaatccatt
    14461 gtggtaagtc tccaagttcg tcttccatac gtgttttaac acgttcatat cccattgcat
    14521 cccataattg gaatggacca agtttccagt tgaaccccca gacaagcgca cggtctatgt
    14581 ctcggaaatc atcggtagct ttaggtacat tgatggcaga gtaatagaaa ttattacgta
    14641 atgtctccca taaaaatagt cccgcttcgt cttgcgcatt gaatatgaca tcaaggttat
    14701 gcactaagtc tttattaaat tcatttaaaa ttggtaattg tggttgcgat acaggtacat
    14761 aatcttgttt ttcaacatcg taaacaagtc gagctttagt ttctttatcc tttttgtaaa
    14821 atccttgttt cgttttacgt ccgagtgcgc cattttcaaa caacgtattt acaattttga
    14881 catcatgaaa ataaggtgtt tcttcaggta cttgttgcat gcctttaatt acagacactg
    14941 caatgtctaa accgactagg tcggataggg catatgtacc tgttttagga cgaccaatcg
    15001 cttgcccagt taaagcatcc acatctacaa tgcttaactt gtgttgctcg gcgcgataca
    15061 taatatcatt cattgtttgc gtgccgactc tatttgcgac aaagccaggc acatcattga
    15121 cgacaatgac acctttacct aacacatttt gcgcgaaatt ttttacatct aatataatag
    15181 attccttcgt gtgtgacgta ggtattaact ccactaattt cataatacgt ggtgggttaa
    15241 agaaatgtag accaaagaat cgttcttgat ccttctcgtt aaatgcttga gcaatcgcat
    15301 taattggaat acctgatgta tttgtagcga ataaagcatc ttctttagca tgttgtagaa
    15361 cttgttgcca aacagcatgc ttaatttcaa tatcttcttt gactgcttcg atatataaat
    15421 cagcatcatc atttaccaag tcatcatcaa aattaccata tgttaaatga ctcgctagat
    15481 ttaagtcgaa tagtagcggt cgtttcttat ctgtaatttt atcgtaagat tttttcgcaa
    15541 tgagatttgg atcgtttttg tccactacaa tatctaatag ttttacttta agtccagcat
    15601 tcacaaagag tgctgccagt tgagcgccca ttgtgcctgc gccaagaacg gttactttat
    15661 taattgtcat agtgattcct ccaatttagt tgaggataag ataaccatta agataattgg
    15721 aataacgttg ctattttata aaattaatta agtatctttg acagtcatct tagcctctta
    15781 tttaaggaaa aagctttatg cttaaaataa gtctttttta gtgaaattaa tgcatctcat
    15841 ataattcttt gctatttata cgaaagcaga atctccagtc aaagcgcgtc caattactaa
    15901 ggcattaatt tcatgtgtac cttcgtacgt gtaaatcgct tctgcatcag agaagaaacg
    15961 tgcaatatca taatcgtcag ctagtatgcc attaccacct gtaataccgc ggcccatagc
    16021 tactgtctca cgcaaacgta aggcattcat catcttcgcc gttgaagttg caacctcgtc
    16081 atattcacca tgtgcttgca tattagctaa ttgagcacat gttgccattg cttgagctaa
    16141 attaccttgc atcattgcta gcttttcttg tattaactga tatttactaa ttggtttgcc
    16201 gaattgctta cgctcagtga cataatctaa tgtggcacgt aaagcgccag ccataccacc
    16261 tgtagccata taggcaacgc ctgctctcgt tgaataaagg attttagcaa tatctttaaa
    16321 gcttgttatg ttttgtaagc gatccgcttc atctactttg acattagtta atttaattag
    16381 tgcgttagga acaatgcgaa gtgcgatttt attatcaatg acttcaatat cgacgccatc
    16441 ttgttctggt ctgactacaa agcaatgggg tttgccagtt tctttattta ctgcgaatac
    16501 tggaatgaca tcagatacat gtgcaccacc aatccatttc ttttcaccat tgataaccca
    16561 agtatcgccc tggcgttcag cgactgtttc aagacctccc gcaacgtccg aaccgtgttc
    16621 tggttcagtt aaagcaaagc atgtacgcag ttcatgtgac tgtaatttag gtacatattt
    16681 cgcaatttgt tctttgctac ctccgaaata gaaagtatta tgccctaaac cttggtgaac
    16741 accgagtagg gtagctaagg aaatatcaaa tcgcgcgagt aggtaagaca tgaaaaactg
    16801 aaatagttga ctaggcattt tggcgtttgg acgatccttg taaagtaatg gattgttaaa
    16861 ataatttaat tctcccagat ctttaaaata gtcctcgggt acagtagcgt ctatccaatg
    16921 ttgattaata ttttcacggt acttactttc tagcaatgaa tctacttgtt gtaaaaattc
    16981 gacttcaccg tctgttaaac ctttagcaat actaagtaca tcttcaggaa ataatgtttt
    17041 taagactgtt tctttttcaa atgtcatata aattcctcct aaaaataata tgaatactaa
    17101 tgtgaaatgc atttaattaa aaaacaacac gcttcaaatg taaacgatta cactgaatac
    17161 cgaaaatttt tatcaccttt aaagtgtttg tgagactttg tcattcatca tttgtcgaat
    17221 cgcaagttta tctggtttct gcgtactgtt taacggcata tgtgtcactg gtacatacat
    17281 tcttgggact ttataacctg ctaaacgact tcgcatatgt tgatctaaaa tttcagcgta
    17341 atgaggttca tcttcgcgaa gtataatggc tgcagcaatt gactcaccat attttggatg
    17401 atcatagcca acgaccacac accggtctac tagtggatgc tcagctaaag cattttcgac
    17461 ttcggatggt aagacatttt cgccaccagt tatgattaat tcttttttac ggtcaataat
    17521 aaatatatcg ccatcgtcgt ccatttttgc taaatctcct gtcaataagt aacgaccatg
    17581 aaacgcttta gcagtctctg ctggtttatt ccaatatcct ggcgtgacat ttttagcctt
    17641 aattgcaagt tcaccaatct cgccagaagg tacttcttca ccgttatcat caaggatacg
    17701 tgcatcaaca aacatgactg ctttaccaat actcattggt ttacgttttg aattttccgg
    17761 tgtattaaca agtacaagcg gtgcttcagt taagccatag ccgttaataa tgtttatgcc
    17821 atattgttta aaagctgctt ggatacttgg taatggttgt gaaccacctt ggatgatata
    17881 atccatagct ttaaaatttt ctggattaaa attactagca cgtagcgtac tataatacat
    17941 tgtcggaatc atgataataa atgtagggtg atattgttca atcatgttat tcaattcttc
    18001 gccattaaag taacgttgaa gaataagtgt gcctcctgac attaatactg gtaatacagt
    18061 atcgttaaac cctaaaacat gaaacattgg tgttgataca atcgtaatat agtttgaatt
    18121 gaacttgtac gtcagctcta agtttgcacc gttatgaacg aatgattcat atgagaacat
    18181 cacaccttta ggtgatccgg ttgtaccact tgtataaatt aatgctgcaa ggtcttgtgg
    18241 ttcaacagga gttgcttgaa aaggttggtg ataatctgga tttacgattt catcatattg
    18301 cgctacatca atatccatat gcaataagtt ttggtcaata tcggtgagtg aacttaaatg
    18361 tttttcagca tagaagagca gttttaattg tgcatcttcc acaatggctg caatttcttt
    18421 tgggttaagc cgccaattca atggtaaaaa aaccgcacct gttttaaaac aagcaaacaa
    18481 taaatctaat attgcaatat catttggcgc aaaaataccg ataacatcgc cttttttaac
    18541 accttgagat gttaaataat gtgccatatt atcagcgcgt gcattgagtt gttggtatgt
    18601 ccaagatgtt tgttttgcgt gatcaataac ggcaggcttg tcatcatcga agtctgaacg
    18661 cgtttttatc caatcgaaat tcattagtat acccccttta gcttcacttt catactttat
    18721 gaattgattg tttaagttgt ccccattttt ctttgtaaat gctggtatca attaatttta
    18781 aatgatcagc aataattggt ttaaaagcca tttgattcaa aatatcttta tgcaaatcaa
    18841 gacctggtgc aatttcaatt agtttcaagc cttgattggt gagctcgaat actgaacgat
    18901 cagtaacaaa atagacttct tgctcgagtg attgtgaata tcgtgcatta aagtcgatat
    18961 ggctcacatc tgatacaaat ttctggtttt gtccttcagt ttcaatgttt aatcgttgat
    19021 tatgacatga gacatgactg ccagctacaa aagtacctga aaagataatt ttatttacag
    19081 attgcgtaat gtctataaag ccgccacatc catttagtcg gtcattgaag taagacacgt
    19141 tgacattgcc gtattgatca acctcagcaa agctaagata ggcaactgat acaccattgt
    19201 tataaataaa atcccatgct cgatcatgag gcatgcgcac atctgcattg taattcatac
    19261 caaaatgttc acgactccca acgaatccac cgaaaatgcc aacatctaga atcggttgca
    19321 catcatgttc aacacattct tcatgcaata aattagagag ttcattattg atgccataac
    19381 cgatgctaat tgtatcgcca taagttaaaa actgagcagc acgtcggaga atcaatttgc
    19441 gactattaaa aggtaatgcg gtttcaggta ttccatcaat tcgttcttct ccagacaagg
    19501 ctggtaaata atgactctga attacttggc ggtgattctt ttcatcttct gtgacgtata
    19561 cataatcgac aagatttcct gggataacaa cttcattcgg ttttagttga tagtcgtcaa
    19621 ctaaatcttt aacttgtaca ataactttcc catgattggc tttcgtgttt aatgcgacat
    19681 gataacactc gctcaagtac gcttcttgag ttaaataaat gttaccttgt tgatctgcgt
    19741 atgttcctct cagtagtgcc acatcaacgc tagggaatgt gtagtgtaag tatgtttcat
    19801 cgttgatggt tactaatgaa actaaatcat cagttgttcg tgtatttact ttaccgccac
    19861 cgtatctagg atcaacagct gtgtttaatc cgattttagt aataactcca ggtaataatt
    19921 gattactctg acgataatga gttgcaatga taccttgtgg taaaaaataa gcttcaatgt
    19981 cattattttt cattgcttgt gccgttttgg aagaagccgt taaaatgctc ataatgacac
    20041 gtttaatcat acgacgttct ataaaatcat ctaaatccgg tgcggcacct aaactatgga
    20101 tatcattcgc taatataaac gttaaatcat tgggcgtatg atatgtgtca tgttgcgcta
    20161 acacagcacg tagaacttcg gcgggtaagt tggctacagc taatgctggt aaaccaatca
    20221 catcaccatc tttaatgata tgttgtaagt cgtgccatgt gatttgtttc aagcaagtca
    20281 cctccatcac atttgataaa atatagtgtt tttacacttt gtgtaaaccc ttacaagaaa
    20341 tataacataa cgacgtttaa aatcaattag aaatatcttt ttattctgat aatagacaca
    20401 gtatagacac attttaatgg tcgataacaa ttgtaatatc aagggtttgt aatgaattga
    20461 atatcattaa aatacttata taaaaatatt gctcggaata taaaaagtta aataggtttt
    20521 gattttcaaa tatggaatac aaggtgccca a
//
LOCUS       DALMNS010000044        20504 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.044, whole genome shotgun sequence.
ACCESSION   DALMNS010000044 DALMNS010000000
VERSION     DALMNS010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20504
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.044"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..394
                     /locus_tag="O6Y56_001347"
     CDS             <1..394
                     /locus_tag="O6Y56_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000876204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MSA protein"
                     /protein_id="HDB5574602.1"
                     /translation="LILSLVANLLVFGVLSAIGLNINILAAMMMILVIPITISGILFF
                     KTNLDKTYIFFNIIFIDFYYYIYNVHLMALPRFNSYIKTEMMELEHIDVLITSKDFGF
                     DEILFFTLYLLLILIILYYLKKQVKTKS"
     gene            528..1145
                     /locus_tag="O6Y56_001348"
     CDS             528..1145
                     /locus_tag="O6Y56_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000558408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding negative transcriptional regulator"
                     /protein_id="HDB5574603.1"
                     /translation="MHVPKYFQVDDFKEIEKFIHSNSFGMIVTVDRGKPIATHVPLVL
                     DKKGDDYYISGHLAKTNPQCNTLKDNQNVLIIYQGAHSYVSSAWYEKENVPTWNYQAV
                     HLYGESSILSEEETIDDLKRLLVKYERHREDPVLWDNISENTKMQAKGIVGFKVKIHK
                     IEAAYKMSQNRNEKDYNNIIEKLEDESNASSVAVAQVMKNIHPYS"
     gene            complement(1239..2504)
                     /gene="lysA"
                     /locus_tag="O6Y56_001349"
     CDS             complement(1239..2504)
                     /gene="lysA"
                     /locus_tag="O6Y56_001349"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDB5574604.1"
                     /translation="MTVKYNQNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRY
                     HRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIH
                     FHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQVVLRVNPGVEAHTHEF
                     IQTGQEDSKFGLSIQYGLAKQAINKVQQSKHLKLKGVHCHIGSQIEGTEAFIETAKIV
                     LRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEI
                     GIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR
                     NEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLVILSTGAYHYSMASNYNQMQK
                     PSVFFLKDGKAREVIKRQSLRQLIINDTK"
     gene            complement(2494..3579)
                     /locus_tag="O6Y56_001350"
     CDS             complement(2494..3579)
                     /locus_tag="O6Y56_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDB5574605.1"
                     /translation="MTATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQ
                     FIHAGIDTFSTTSLREAIQIRQLAPDATIFLMNAVYEFDLVREHQIHMTLPSLTYYYN
                     HKDDLVGIHVHLEFENLLHRSGFKDLNEIKEVLKDHHQNQNAKMIISGLWTHFGYADE
                     FDVSDYNIERSQWMEIVEALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIAL
                     YGSRPYSSLNQHDIVQSLTVKAHVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGY
                     GDGILRTRAKHEALINGKRYPIRALMMSHMFVEVDGNVHAQDEVILYNNDIRIDEYTF
                     KGVGANSEQLSAMNHDSLKKEYISNDC"
     gene            complement(3584..4735)
                     /locus_tag="O6Y56_001351"
     CDS             complement(3584..4735)
                     /locus_tag="O6Y56_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDB5574606.1"
                     /translation="MNELEFVTKHRRHLHQHPELSLHEFETTAYIKAFLDSLNIKYDC
                     PLETGVIAYLEGNGSHTIAYRADIDALPILEENDVPYRSQSDHVMHACGHDGHTTALM
                     LFVQRCKDMQDAGQLPQNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPF
                     ADEGIAVIRDEEITASATEYRFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFH
                     LNGLKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTYDIDDLTIVKNQMQKIAESVKLL
                     FNVDCEVKFAEGYPPTINSPKLRTQIEDALIKADLNVYDKPTPFLFGEDFSFYGQQLA
                     PAYFVFIGTRNEDKGFVTGLHTSHLNFDEKVLINVANFYENLLNNYKEV"
     gene            complement(4878..5597)
                     /gene="dapD"
                     /locus_tag="O6Y56_001352"
     CDS             complement(4878..5597)
                     /gene="dapD"
                     /locus_tag="O6Y56_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-acetyltransferase"
                     /protein_id="HDB5574607.1"
                     /translation="MVQHLTAEEIIQYISDAKKSTPIKVYLNGNFEGITYPESFKVFG
                     SEQSKVIFCEADDWKPFYETYGSQFEDIEIEMDRRNSAIPLKDLTNTNARIEPGAFIR
                     EQAIIEDGAVVMMGATINIGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIE
                     PPSASPVIIEDDVLIGANAVILEGVCVGKGAIVAAGAIVTQDVPAGAVVAGTPAKVIK
                     QASEVQDTKKEIVAALRKLND"
     gene            complement(5624..6346)
                     /locus_tag="O6Y56_001353"
     CDS             complement(5624..6346)
                     /locus_tag="O6Y56_001353"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000698231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDB5574608.1"
                     /translation="MKILLIGYGAMNQRVARLAEEKGHEIVGVIEPTPKATTPYQQYQ
                     HIADVKDADVAIDFSNPNLLFPLLDEEFHLPLVVATTGEKEKLLNKLDELSQNMPVFF
                     SANMSYGVHALTKILAAAVPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKEN
                     VTPVYDRHELNEKRQPHDIGIHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFAN
                     GAIQAAERLVNKPNGFYTFDNL"
     gene            complement(6343..7230)
                     /locus_tag="O6Y56_001354"
     CDS             complement(6343..7230)
                     /locus_tag="O6Y56_001354"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDB5574609.1"
                     /translation="MTHLFEGVGVALTTPFTNNKVNLEALKAHVNFLLENNAQAIIVN
                     GTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAI
                     MLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIV
                     ALKDATNDFEYLEELKKRIDTNSFALYSGNDDNVVEYYERGGKGVISVIANVIPKEFQ
                     ALYDAQQSGLDIQDQFKPIGILLSALSVDINPIPIKALTSYLGFGNYELRLPLITLEE
                     TDTKVLREAYNIFKAGENE"
     gene            complement(7232..8221)
                     /locus_tag="O6Y56_001355"
     CDS             complement(7232..8221)
                     /locus_tag="O6Y56_001355"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDB5574610.1"
                     /translation="MTKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEV
                     EFQGKTYTVQELTDARASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAE
                     DIDLIVPEVNEPTFTRGIIANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGM
                     KGKKDLAEGINGKAPEAYPHPIYNNVLPHIDVFLENGYTKEEQKMIDETRKILNVPDL
                     KVTATCARVPVQDSHSVEIDVTLEKEATAEDIKALFDQDDRVVLVDNPENNEYPMAIN
                     STNKDEVFVGRIRRDDSLENTFHVWCTSDNLLKGAALNAVQVLEQVMRLKGAN"
     gene            complement(8285..9490)
                     /locus_tag="O6Y56_001356"
     CDS             complement(8285..9490)
                     /locus_tag="O6Y56_001356"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HDB5574611.1"
                     /translation="MVTRSVLKFGGSSVSDFTKIKRIAEMLKERVNQDEQLIVVVSAM
                     GNTTDELMTNVSTLTKTPKQQELALLLTTGEQQTVSYLSMVLNDIGVNAKAMTGYQAG
                     IKTIGHHLKSKIAQINPQTFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVA
                     LAVSNQIPCEIYTDVDGVYATDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVEL
                     AKNYNIPLYLGKTLSNVKGTWIMSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLL
                     TQLFTELEEGAVNVDMISQIVNLDGLQLSFTIKDSDFHQISMILETLKNQYEALAYKI
                     NEHYVKISLIGSGMRDMSGVASKAFLTLIENNIPFYQTTTSEISISYVIDDFNGQQAV
                     EKLYDAFNI"
     gene            complement(10350..11951)
                     /locus_tag="O6Y56_001357"
     CDS             complement(10350..11951)
                     /locus_tag="O6Y56_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDB5574612.1"
                     /translation="MLQVTDVSLRFGDRKLFEDVNIKFTEGNCYGLIGANGAGKSTFL
                     KILSGELDSQTGHVSLGKNERLAVLKQDHYAYEDERVLDVVIKGHERLYEVMKEKDEI
                     YMKPDFSDEDGIRAAELEGEFAEMNGWNAEADAANLLSGLGIDPTLHDKKMAELENNQ
                     KIKVLLAQSLFGEPDVLLLDEPTNGLDIPAISWLEDFLINFDNTVIVVSHDRHFLNNV
                     CTHIADLDFGKIKVYVGNYDFWYQSSQLAQKMAQEQNKKKEEKMKELQDFIARFSANA
                     SKSKQATSRKKQLEKIELDDIQPSSRRYPFVKFTPEREIGNDLLIVQNLSKTIDGEKV
                     LDNVSFTMNPNDKAILIGDSEIAKTTLLKILAGEMEPDEGSFKWGVTTSLSYFPKDNS
                     EFFEGVNMNLVDWLRQYAPEDEQTETFLRGFLGRMLFSGEEVKKKASVLSGGEKVRCM
                     LSKMMLSSANVLLLDEPTNHLDLESITAVNDGLKSFKGSIIFTSYDFEFINTIANRVI
                     DLNKQGGVSKEIPYEEYLQEIGVLK"
     gene            12098..13000
                     /gene="cvfB"
                     /locus_tag="O6Y56_001358"
     CDS             12098..13000
                     /gene="cvfB"
                     /locus_tag="O6Y56_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding virulence regulatory protein CvfB"
                     /protein_id="HDB5574613.1"
                     /translation="MALDKDIVGSIEFLEVVGLQGSTYLLKGPNGENVKLNQSEMNDD
                     DELEVGEEYSFFIYPNRSGELFATQNMPDITKDKYDFAKVLKTDRDGARIDVGLPREV
                     LVPWEDLPKVKSLWPQPGDHLLVTLRIDRENHMYGRLASESVVENMFTPVHDDNLKNE
                     VIEAKPYRVLRIGSFLLSESGYKIFVHESERKAEPRLGESVQVRIIGHNDKGELNGSF
                     LPLAHERLDDDGQVIFDLLVEYDGELPFWDKSSPEAIKEVFNMSKGSFKRAIGHLYKQ
                     KIINIETGKITLTKKGWSRIDSKE"
     gene            13312..14295
                     /locus_tag="O6Y56_001359"
     CDS             13312..14295
                     /locus_tag="O6Y56_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HDB5574614.1"
                     /translation="MKKWQFVGTTALGATLLLGACGGGNGGSGNSDLKGEAKGDGSST
                     VAPIVEKLNEKWAQDYSDAKISAGQAGTGAGFQKFIAGDIDFADASRPIKDEEKQKLQ
                     DKNIKYKEFKIAQDGVTVAVNKENDFVDELDKQQLKAIYSGKAKTWKDVNSKWPDKKI
                     NAVSPNSSHGTYDFFENEVMNKEDIKAEKNADTNAIVSSVTKNKEGIGYFGYNFYVQN
                     KDKLKEVKIKDENGKATEPTKKTIQDNSYALSRPLFIYVNEKALKDNKVMSEFIKFVL
                     EDKGKAAEEAGYVAAPEKTYKSQLDDLKAFIDKNQKSDDKKSDDKKSEDKK"
     gene            14486..15412
                     /gene="pstC"
                     /locus_tag="O6Y56_001360"
     CDS             14486..15412
                     /gene="pstC"
                     /locus_tag="O6Y56_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDB5574615.1"
                     /translation="MTSSTNVKALIEKNNNKKGKHNDKIIPVILAAISAISILTTLGI
                     LITLLLETITFFTRIPITEFLFSTTWNPTGSDPKFGIWALIIGTLKITVIATIFAVPV
                     GLGAAIYLSEYASDRARRIIKPILEILAGIPTIVFGFFALTFVTPVLRSFIPGLGEFN
                     AISPGLVVGIMIVPLITSLSEDAMASVPNKIREGAYGLGATKLEVATKVVLPAATSGI
                     VASIVLAISRAIGETMIVSLAAGSSPTASLSLTSSIQTMTGYIVEIATGDATFGSNIY
                     YSIYAVGFTLFIFTLIMNLLSQWISKRFREEY"
     gene            15414..16331
                     /gene="pstA"
                     /locus_tag="O6Y56_001361"
     CDS             15414..16331
                     /gene="pstA"
                     /locus_tag="O6Y56_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDB5574616.1"
                     /translation="METTDNNRQSLVDQQLVQKHLSSRTVKNKVFKLIFLACTLLGLV
                     VLIALLTQTLIKGISHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSIILGI
                     GTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFVGGAGIEALKMGNSIL
                     AAALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIRRVVLPAALPGILT
                     GFILSLSRALGETAPLVLIGIPTILLATPRSILDQFSALPIQIFTWAKMPQEEFQNVA
                     SAGIIVLLVILILMNGVAIILRNKFSKKF"
     gene            16378..17229
                     /locus_tag="O6Y56_001362"
     CDS             16378..17229
                     /locus_tag="O6Y56_001362"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HDB5574617.1"
                     /translation="MAQTLAQTKQISQSHTFDVSQSHHKTPNDTNSHSVIYSTQNLDL
                     WYGENHALQNINLDIYENQITAIIGPSGCGKSTYIKTLNRMVELVPTVKTAGKILYRD
                     QDIFDQKYSKEQLRTNVGMVFQQPNPFPKSIYDNITYGPKIHGIKNKKVLDEIVEKSL
                     RGAAIWDELKDRLHTNAYSLSGGQQQRVCIARCLAIEPEVILMDEPTSALDPISTLRV
                     EELVQELKEKYTIIMVTHNMQQAARVSDKTAFFLNGYVNEYDDTDKIFSNPSNKKTED
                     YISGRFG"
     gene            17236..17877
                     /gene="phoU"
                     /locus_tag="O6Y56_001363"
     CDS             17236..17877
                     /gene="phoU"
                     /locus_tag="O6Y56_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HDB5574618.1"
                     /translation="MAIIRQRYQEQLDDLIKELRRLGANVYVSIENGIKSLSIDDRGF
                     ARQTVKNDKHINQLNYDINERVIMLITKQQPIASDLRMMISSLKIASDLERIGDNASS
                     IANIRLRTKITDDYVLTRLKTMGKLAMLMLKDLDQAFKKKDTVLIREIIERDEDIDDL
                     YSHIINATYLIDNDPFVAAQAHLAARHLERIGDHIINIAESVYFYLTGTHYEQ"
     gene            complement(18019..19833)
                     /gene="pepF"
                     /locus_tag="O6Y56_001364"
     CDS             complement(18019..19833)
                     /gene="pepF"
                     /locus_tag="O6Y56_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HDB5574619.1"
                     /translation="MSQGLPLREDVPVSETWDLVDLFKDDQQYYESIDALVQQANQFH
                     HTYATTLNSIEQINTALAELENILIALDRLSNYAELRLSVDTSNIEAQVLSAKLSTTY
                     GKIVSQLSFVESEILELPEEILQQLEEACPYQHYIKQLIKQKPFQLSASVEQVLATLS
                     PTLNSPYDLYGTTKMLDITFDSFEHDGTTYPVDYATFENDYEDNKNPDFRRKSFKSFS
                     DGIRKYQHTTAATYNMQVQQEKIEADLRGFESVIDYLLHSQEVTRDMFDRQIDMIMRD
                     LAPVMQKYAKLLQRIHGLDNMRFEDLKISVDPDYEPEISIEDSKNYIFGALSVLGDDY
                     TNMLREAYDQRWIDFAQNKGKDTGAFCASPYFTHSYVFISWTGKMAEAFVLAHELGHA
                     GHFTLAQKHQPYLESEASMYFVEAPSTMNEMLMANYLFNTSDNPRFKRWVIGSILSRT
                     YYHNMVTHLLEAAYQREVYHKVDQGESLNAPTLNEIMLNVYKQFFGDAVDMTEGAELT
                     WMRQPHYYMGLYSYTYSAGLTIGTVVSQKIKNEGQPAVDAWLETLKKGGSVSPVELAN
                     IAGVDITTEQPLKSTIQYISDLVDEVEKLTDEIEQANN"
     gene            20038..20382
                     /locus_tag="O6Y56_001365"
     CDS             20038..20382
                     /locus_tag="O6Y56_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574620.1"
                     /translation="MTLFDMPNYLWITTLIMILLTIFCCLVLNKWFVSAVITFVILGV
                     LAFFIPNFQDIKYQPLLGYAAFLAIMSLLISFLLWYFTRNWRKERKARKLEKQIEKYG
                     YEGAELRRKDKK"
     gene            20330..>20504
                     /locus_tag="O6Y56_001366"
     CDS             20330..>20504
                     /locus_tag="O6Y56_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574621.1"
                     /translation="MKNTAMRALNFAVKIKNNIRQLYAQNHRLLSYTAVTIISKEVEY
                     SAIVVFVLTFLYFR"
BASE COUNT         6751 a         3492 c         3289 g         6972 t
ORIGIN      
        1 tcttatcctt agtttagttg ctaatttatt agttttcggt gtattatctg caattggttt
       61 aaatattaat attttagcag caatgatgat gattctagtt attccaatta cgatatcagg
      121 aatattattc tttaaaacta atttagataa gacatacata ttttttaaca taatttttat
      181 agacttttat tactatattt acaatgtaca tttaatggcc ttaccaagat ttaatagtta
      241 tattaaaaca gagatgatgg aattagaaca tattgatgta ttaattacaa gtaaagattt
      301 tggatttgat gaaattttat tttttacact gtatttgtta ttaatcctta tcattttata
      361 ttatttaaaa aagcaagtta aaactaaaag ttaaagccta attatttttg tttcatagtt
      421 tattttataa atgagtgata ctatggcatt actctaactt atttatcctt agatttttta
      481 atgataaaat atattaaaat gaattgttat tcacaggggg agatcatatg catgtgccaa
      541 agtattttca agtagatgat tttaaagaaa tcgaaaagtt tattcatagt aattcttttg
      601 gaatgattgt aactgtggat cgaggaaagc ctatagctac ccatgtacca ttagttttag
      661 ataaaaaagg ggacgactat tatattagtg ggcatctagc taaaacaaat cctcaatgta
      721 atacattaaa agataatcaa aatgtattaa tcatatatca aggtgcacat tcttacgttt
      781 cttcagcgtg gtatgaaaaa gaaaatgtac ctacatggaa ttatcaagca gttcatttat
      841 atggtgaatc aagtatatta agtgaggaag aaacaataga tgacttgaaa agactattgg
      901 taaagtatga aaggcatcgt gaagacccag tattatggga caatatttct gaaaatacca
      961 aaatgcaggc caaaggtatt gtaggcttta aagtcaagat acacaagata gaggctgcat
     1021 acaaaatgag tcagaatcgt aatgaaaagg attataataa cataattgaa aagctagaag
     1081 atgaatctaa tgcaagcagt gttgctgtag ctcaagtaat gaaaaatatt catccatatt
     1141 cataaaccaa caagcaataa actcttaatt aaataatctt aaaaattccc cgagtcacag
     1201 tataattttc tgttcttcgg ggattacttt gtttattttt attttgtatc attaataata
     1261 agttgtctta acgattgtcg ctttataact tcacgtgctt tgccatcttt taagaaaaac
     1321 acagaaggct tttgcatttg gttgtaattg gatgccatag agtaatgata tgcaccagtt
     1381 gataatataa caagatagtc tccacgtttg actgatgaag gtaatttagc gtctttaata
     1441 atgatatcac cagactcaca taattttcca gctatagtta cactgtcatc tgcttcttca
     1501 tttctattaa caagcaatgc ttgatacttt gcgtcataaa gtgcagttct gatatgatca
     1561 ctcataccgc catcgattga aacatattta ttaatctctg gaatctcttt aatggttcca
     1621 acttcatata aagtaacgcc agcttcacct acaatagatc gtcccggttc aatacctatt
     1681 tctggtgcat ctatacctag aactttaatt tcagatttta ttgcgtctgt aatatcttta
     1741 ataccacttt cgatagggaa actttcgtca ccttcaacat atttaatacc aaagccacca
     1801 ccaaggttta ataattcaac ttgaatgcct tgctctttaa gccaacgtaa aacaatttta
     1861 gcagtttcaa taaatgcttc tgtaccttca atctgtgaac caatatgaca atgtacacct
     1921 tttaatttaa gatgtttaga ttgttgcact ttgttaattg cttgtttagc taagccatat
     1981 tgaattgata agccaaactt actatcttct tgaccagttt gaataaattc gtgtgtatgt
     2041 gcttcaacac ctggattaac tcgtaataca acttgaaccg tatcattagc atagcggtct
     2101 attaattcaa tttcttctaa tgaatctata acaaaataac cgatgttatt ttctaaagca
     2161 tacctaattt catgtttcgt tttattgtta ccatggaaat ggatccgact cggttcaaaa
     2221 cctgcttcta acgctgtata taattcacct tcagaaacaa catctaactg taaatcttcc
     2281 tcagctacaa gtttgaccat ttgaatgcaa gtaaatgcct ttgaggcgta tgaaatattg
     2341 tattttaatc cactatcttt aaatgcgcga tggtaacggc gcatctgttc tctaatttgc
     2401 agttcatcat aaacaatggt aggtgtacca aagctttgcg caatcgtttt taaactaata
     2461 ccatccattg ttaattcgcc attttgatta tatttaacag tcatttgaaa tgtactcctt
     2521 ttttaaagaa tcatgattca tagcacttaa ttgttcagaa tttgcaccaa cacctttaaa
     2581 agtatattca tcgatgcgga tatcattatt ataaagaata acttcatctt gtgcatgtac
     2641 attgccatct acttcaacaa acatatggct catcattaat gcacgtatcg ggtagcgttt
     2701 accattgata agtgcttcat gtttagcacg agttcttaaa attccatcgc cataaccgat
     2761 atcaactaca gctaattttg tattgttttt agtcacttca aaggcaaagc tataaccgca
     2821 ataatcaccc gcttgtactt cgcgcacttg aataacatgt gcttttacag ttaatgactg
     2881 aactatatca tgttgattca gtgaactata tggtcttgaa ccgtataacg caatacctac
     2941 acgcgcatgt gtatggtggg gtagtaatat ttgtccttcc cgataaaaac tcgcactatt
     3001 ttgagcatgg attaggtcga actgataacc ttcagataag agtgcttcaa caatttccat
     3061 ccattgtgaa cgttcaatat tataatctga cacatcgaat tcatcagcat atccaaaatg
     3121 ggtccataaa ccactaatga tcatttttgc attttgattt tgatggtgat ctttcaatac
     3181 ttctttaatt tcgtttaaat ctttaaatcc agaccgatgt aataaatttt caaattctaa
     3241 gtgaacatga atacctacta aatcatcttt atggttatag taatatgtca acgacggcaa
     3301 agtcatgtgt atttgatgtt cacggactaa atcaaactcg taaactgcat tcattaaaaa
     3361 gattgttgca tctggagcaa gttgtctaat ttgaattgct tctcgtagtg atgttgtact
     3421 aaatgtatct atacctgcat ggataaactg agttacagca aattctaggt catagtgata
     3481 tgcattattt ttaacaactg ccattaatgg ctgattgttt ttgactgtga ttgcattttg
     3541 taaaaatatt ttcttattta cagaccatgt tgctgtcaat gtattacacc tctttgtaat
     3601 tatttaataa attttcgtaa aaattagcca cgtttattaa cactttttca tcaaaattta
     3661 aatgtgatgt gtgcaaacca gttacaaaac ctttatcttc atttcgtgtt cctataaaaa
     3721 caaagtaagc tggagctagt tgttgaccat aaaaactaaa atcttcccca aataagaatg
     3781 gcgttggttt gtcatagaca tttaaatcag cttttattaa agcgtcctct atttgagtac
     3841 gtaatttcgg actattgatt gtagggggat aaccttctgc aaatttaact tcacagtcta
     3901 cattaaacag aagcttgaca ctttctgcta tcttttgcat ttgattttta acgattgtta
     3961 aatcatcaat atcatatgta cgaattgtac cttctaaata accattactt ggtacagtat
     4021 taatcgcttc accagcttta aaatgaccaa tatgaacaat atttcgtttc aaaccgttaa
     4081 ggtgaaattg ttgaatttgt gatatttgag ttaatacatg ttgtaatgct tcaccacaag
     4141 aatgaccttg ttctttatca gcaacatgac ttgacaggcc tgttaagaaa aagcgatact
     4201 ctgttgcact ggccgtaatt tcttcatctc ttatcactgc aatgccttca tcagcaaatg
     4261 gattaacatg aataccaaat accgcttcaa ttggatactt atcaaaggca ccggctttta
     4321 ttaatcgatt tgcaccgcca ccagtttctt ctgcaggttg gaaaatgaaa acgacatttt
     4381 gcggtaattg acccgcatct tgcatgtctt tgcaacgttg tacaaaaagc attaatgcag
     4441 ttgtatgacc atcatgtcca caagcatgca tcacatgatc agattgactg cgataaggca
     4501 catcattttc ctctaaaata ggtaacgcat caatatcagc tctatacgct atcgtatgtg
     4561 agccattacc ttctaagtat gcaatgacgc cagtttccaa tgggcaatcg tatttaatat
     4621 ttaaactatc taaaaatgct ttaatataag cagttgtttc aaattcatgt aagcttaatt
     4681 caggatgttg atgtaaatga cggcgatgtt tcgtaacaaa ttctaattca ttcataatta
     4741 tcaatccttt gtgttaaatt actatataaa tagtgtaacg tatttcgaaa tttgtgatca
     4801 taagtttatt caatgataaa caataaggtt gagacataat cgtatctcaa ccttgaaatt
     4861 attatacgtt gacgtcacta gtcattcagt tttcttaatg ctgctacaat ctctttttta
     4921 gtatcttgta cttcagaagc ttgcttaatc actttcgcag gtgtaccagc aacaactgca
     4981 ccagctggta catcttgtgt cacaatcgcg ccagctgcaa caatagcacc tttaccaaca
     5041 catacacctt ctaaaataac tgcatttgca ccgattaata catcatcctc gattataact
     5101 ggtgaagcac tagggggttc aatcacgcct gctaatactg cgccagcccc tacatgtaca
     5161 tttttaccag ttgtagcacg accaccgaga gtagcattca tatcaatcat cgtaccttcg
     5221 ccaacgactg cgccaatatt aattgttgcg cccatcataa cgacagcacc atcttcaata
     5281 atagcttgtt ctctaataaa tgcacctggt tcaatacgtg cattagtatt tgttaagtct
     5341 tttaatggaa tggcagaatt gcggcgatcc atttcaattt ctatatcttc gaattgacta
     5401 ccatatgttt cgtaaaaagg tttccaatca tctgcttcac aaaagattac tttagattgt
     5461 tctgaaccaa atactttaaa actttctgga tatgtgatgc cttcaaaatt accatttaaa
     5521 tatactttta ttggtgtaga ctttttagca tcacttatat attgaataat ttcttcagct
     5581 gttaaatgtt gtaccataaa ataatcgatc tcctttaata tgtttatagg ttgtcaaacg
     5641 tataaaagcc gtttggttta ttaactaagc gttctgctgc ttgtattgca ccattcgcaa
     5701 aaatatcttt tgattgtgca cgatgcgtga tttgaatcgt ttcatcagtg ccggcaaata
     5761 gaacttcatg ttcaccgaca atcgtacctc cacgaataga atgaatacca atatcatgtg
     5821 gctggcgttt ttcatttaat tcatgtctat cataaacagg agttacattt tctttcaaag
     5881 atacaatcac gtcatataat ttttctaacg taccacttgg tgcatctact tttttattat
     5941 gatgtgcctc agtcaattcg atgtcgaaat catcaagtag gggaacagca gctgctaaaa
     6001 ttttagtcag tgcatgcacg ccataactca tgttcgcact gaaaaataca ggcatatttt
     6061 gactcaattc atctaactta ttaagtagtt tttctttctc gccagttgtt gccacaacta
     6121 atggcaaatg aaactcttca tctaataaag ggaaaagcag atttggattt gaaaaatcta
     6181 ttgcaacatc ggcatcttta acatcagcaa tatgttggta ttgttgatat ggcgttgttg
     6241 ctttcggtgt aggttcgatt acccccacaa tttcatggcc tttttcttct gctaatctag
     6301 caacgcgttg attcattgcg ccatagccaa ttagtaatat tttcactcat tttcacccgc
     6361 tttaaatatg ttatatgctt cacgaagcac tttagtatct gtttcttcta gtgtaatcaa
     6421 tggcagacgt aattcatagt ttccaaatcc taaataactt gttaaagctt taataggaat
     6481 tgggttaata tcaactgata gagctgataa cagtatgccg attggtttaa attgatcttg
     6541 aatatctaat ccgctttgtt gagcatcgta taacgcttga aattctttag gaattacatt
     6601 agcaatgaca gaaataacgc ctttaccgcc acgttcatag tattcgacga cgttgtcatc
     6661 attgccacta tataatgcaa atgaatttgt atcaattcgc tttttcagtt cttctaaata
     6721 ctcaaaatca ttcgtagcat cttttaaagc tacaatataa ggatgttgac ttaatatttc
     6781 tacagtttct ggttcaattg tcatgttcgt tcttgaagga acattgtaca gcacgactgg
     6841 taatttcaca gcatctgcaa tcgcttcaaa atgttttact aaaccacgtt gattcgtttt
     6901 gttgtagtag ggcgtaatta acataattgc atcagcccct aaggctttag cttggattga
     6961 agcttggatt gacttttcag tatcattagt tccagttcct gctatgacag gaacacgttt
     7021 atctacaaga tcaataactg tttttagaat gagttctttt tcatctgttg ttaaagtagg
     7081 gctctcagca gtagttccat taacgatgat tgcttgggca ttattttcta gtaaaaaatt
     7141 aacgtgtgct ttcaaagctt caagattaac tttgttattt gtaaaagggg ttgtaagtgc
     7201 aacgccaaca ccctcaaata aatgtgtcat tttaattcgc tccttttaaa cgcataactt
     7261 gttccaatac ttgtacagca tttaatgcag caccttttaa taaattgtct gatgtacacc
     7321 atacatggaa agtattttct aatgaatcat ctctacgtat acggccaaca aatacttcat
     7381 ctttattagt agaattgatt gccattggat attcattgtt ctctggattg tctactaaaa
     7441 caacgcggtc atcttgatca aataatgctt taatatcttc tgcagtcgct tctttttcaa
     7501 gcgttacatc aatttcaaca ctatgactat cttgaacagg aacacgtgca catgttgctg
     7561 ttacttttaa gtctggtaca tttaaaatct ttctagtttc atcaatcatc ttttgctctt
     7621 cttttgtata tccattttct aaaaacacat caatatgcgg taatacatta ttataaattg
     7681 gatgtggata tgcttcaggc gccttaccat taattccctc agctaaatct tttttacctt
     7741 tcatccctga acctgatacc gcctgatatg ttgtatatgc cactcgtttt aatccatagg
     7801 catcttgtaa tacttttaga ggtacaacag attgaatcgt agagcagttt ggattggcaa
     7861 tgatacctct tgtaaatgta ggttcattga cttccggaac gattaaatca atatcttctg
     7921 ccatacgcca ttgacttgaa ttgtctataa cgattgcacc agctttttca aagagtgggg
     7981 caaagtgttc gcttgtaccg ccaccagcac tcattaatac ataatcgaaa tgttcacttg
     8041 cacgagcatc agttaattct tgaactgtat atgtttttcc ttgaaattca acttcttgcc
     8101 ctgcagaacg tgctgatgaa aataatacta attcatcgaa aggaatattt ttacgattta
     8161 atgtctctaa catttttgtt cctactaatc ctgttgcacc cacaactgct aattttgtca
     8221 taacttgtca ctccatttta taataatttc caatttttag aatattttaa caatcatttt
     8281 accattaaat gttaaatgcg tcatatagtt tttctaccgc ttgttgccca ttaaaatcat
     8341 caatgacgta tgaaatactt atttcagatg ttgttgtttg gtagaaaggg atattatttt
     8401 caattaatgt caaaaatgct tttgatgcca cacctgacat atcacgcata cctgagccaa
     8461 ttaatgaaat tttgacataa tgctcattga ttttataagc taatgcttca tattgattct
     8521 ttaatgtttc aagaatcata gaaatttgat gaaaatcact atctttaatc gtgaaggata
     8581 gttgtagccc atccaagttg acgatttgtg aaatcatatc aacatttaca gcgccttctt
     8641 caagttccgt aaatagttgt gtaagtagct gattgtcagg taggggataa ctaattgtta
     8701 catgcatcat atgtttatcc aaagccacac cagtaactgc ttttttctct aatatttctt
     8761 catttgacat aatccatgtt cctttcacat tcgataaagt ttttcctaaa tataaaggga
     8821 tattatagtt tttagctaat tcaacacttc ttgtttcaag tacaccagca cctaaagcgc
     8881 tcatttccat catttcttca tatgagacga tgtctagtcg tttagctttt ggtaaaagtc
     8941 ttgggtcagt ggcatacaca ccatcaacgt cggtataaat ttcacaaggt atttgattac
     9001 taacagcaag tgccacagcg gtcgtatcag aaccacctct gcctaaagtt gttaattcct
     9061 gatgttcatt gatgccttga aatccagcaa ctactaaaat atcgttttct tgaaaggctt
     9121 gttcaaatgt ttgaggatta atttgagcaa ttttactttt taaatgatgg ccaatggttt
     9181 taatacctgc ttgatagcca gtcattgctt tggcattcac accgatatca tttaatacca
     9241 ttgataaata agatacagtt tgttgctctc cggttgtcaa taataatgcc aattcttgtt
     9301 gttttggtgt tttagtcaat gtcgatacat tcgtcattaa ttcatctgtt gtgttaccca
     9361 tagcacttac aacgacaatt aattgttcat cttgattgac ccgctccttt aacatttcag
     9421 cgatcctttt tatttttgta aaatcactga cggatgatcc gccaaatttc aacacacttc
     9481 ttgttaccat ataatcctcc taattgttag gaagggcaca caataataaa aaaagaacaa
     9541 gttcggaatg cgaacttgct cttaatctat atacaagtga tgcactccat tatttttaaa
     9601 taatgacaaa ctctcagctc ttaaccaaaa agtccaacaa attataactg ctattataat
     9661 cgcttcggca tcgcaccctt tcaaattcag ctgttagcag acagtaatct aaactttact
     9721 catgattgat gcgcctcatc aaaatattat taaattggta tgtgttcatt atacatatga
     9781 caaatatgaa tgtaaaccga taatttagat tttttggaat aacctgaaaa ttcaagttat
     9841 agcgttgctt atattataaa aggtggtgat aatgagactt ttcgaaaaat aaaatccaaa
     9901 atacttatag catactcaat atgcacatta aataaatata ctcttttaat gcgttgataa
     9961 ctgtatttgt aatttagaga aggggtgttc actatgctga tgtgttaaaa aataaaataa
    10021 aaaggacacc tcgatgctat aaacattagc atcgagacgc ccagttaatg tctattaaat
    10081 tgaatatagt ctcggacatg aatcaatgcc ctagaccctg caatgttata ttgacagtag
    10141 ttgactgaat gaaaatgact ttgtagctag cttttttcac cccttgtcgg cgccacgcat
    10201 agagaaattg gattcctaat ttctacaaac aataccagtt ggggaataag tcccaatata
    10261 gaaggtgaca gtaagtcaac ttacaaaaat gtgcaagtta gccgggcctc aacacagaga
    10321 ttttcgaaaa gaaattctac atattatatt tattttaaaa cgccgatttc ttgcaagtat
    10381 tcttcatatg gaatttcttt tgaaacgccg ccttgtttat ttaaatcgat aacacgattt
    10441 gcaatcgtgt tgataaattc gaagtcataa gaagtaaaga tgatagaacc tttaaatgat
    10501 ttaagaccat cattgacagc agtaatactt tctaagtcta agtggttagt aggttcgtca
    10561 agtaaaagta cattcgcact tgataacatc attttactta gcatacaacg tactttttct
    10621 ccacctgaaa gcacactagc ttttttctta acttcttcac cactaaataa catacgacct
    10681 aagaaaccac gtaaaaatgt ttctgtttgt tcatcttcag gagcatattg tcttaaccaa
    10741 tcaacgagat tcatatttac accctcaaag aactctgagt tatctttagg gaagtaactt
    10801 aatgatgtag taacacccca tttaaatgaa ccttcgtctg gttccatttc gccagctaat
    10861 attttaagta atgttgtttt tgcaatttca ctatctccaa ttaaaatcgc tttatcattt
    10921 ggattcattg tgaatgatac attatctaat actttttcgc cgtcaattgt tttagaaaga
    10981 ttttgaacga ttaataagtc gttaccaatc tcacgctcag gcgtgaattt aacgaaagga
    11041 tatcttcttg atgatggttg aatatcatct aattcaattt tctcaagttg ttttttacga
    11101 cttgttgctt gtttagattt agaagcgtta gctgagaaac gagcaataaa gtcctgtaac
    11161 tctttcattt tttcttcttt tttcttgttt tgttcttgag ccatcttttg agctaactga
    11221 ctagattgat accaaaaatc atagttacca acataaactt taattttacc aaagtctaaa
    11281 tcagcgatat gagtacatac attatttaag aaatgacggt catgtgatac tacgataaca
    11341 gtattatcaa agttaattaa gaaatcttct aaccaactga ttgctggaat atccagaccg
    11401 ttagtaggct catccagtaa tagtacgtct ggttcaccga ataaactttg cgctaataat
    11461 actttaattt tttggttgtt ttctaattca gccatttttt tatcgtgtaa agttggatcg
    11521 atacctaaac cggataaaag gttagctgca tcagcttcag cattccaacc attcatttct
    11581 gcaaattcac cttcaagttc ggcagcacgg ataccatctt catcactgaa atctggcttc
    11641 atatagattt catctttttc tttcataacc tcataaagac gttcgtgacc tttaattaca
    11701 acatcaagca cgcgttcatc ttcataagca tagtggtcct gttttaaaac agctagacgt
    11761 tcatttttac ctaatgaaac atgtcctgtt tgagaatcta attcaccaga taatattttt
    11821 aagaatgttg atttacctgc accattcgca ccaattaatc cataacaatt accttctgta
    11881 aatttaatat ttacatcttc aaatagttta cgatctccaa aacgtaaact cacatcagtt
    11941 acttgtaaca tgcattttct cctttttttc attcgatatt ctaacggaag aattatatca
    12001 tattatcgtc acagtttcga cctcatataa gttgtaatga tagaatgact cacacatgtt
    12061 ataataataa agaatacaag aatcgaagga gaataacatg gcattagaca aagatatagt
    12121 aggttctata gaattccttg aagtagtagg gttacaaggc tcaacttacc ttttaaaagg
    12181 accaaacggt gaaaacgtaa agttaaacca atcagaaatg aacgatgatg atgaattaga
    12241 agtaggtgaa gaatatagtt tcttcattta tccaaaccgt tcaggtgaat tatttgcaac
    12301 tcaaaatatg cctgatatta cgaaagataa atatgatttt gctaaagtac ttaaaacgga
    12361 tcgcgatggg gcacgtatag atgttggatt accccgtgaa gtgttagtac catgggaaga
    12421 tttaccaaaa gtgaaatcac tatggccaca accaggtgat catttgctag ttacattacg
    12481 aattgaccgt gagaatcata tgtatggacg tttagcgagt gaatctgttg tagaaaatat
    12541 gtttacacct gtacacgacg ataatttaaa aaacgaagtc attgaagcca aaccttaccg
    12601 cgtattacga attggtagct tcttattaag tgaatcaggt tacaaaatat tcgtacatga
    12661 atcagaacgt aaagctgaac caagactagg tgaatctgtt caagttagaa ttatcgggca
    12721 taatgataaa ggtgagttaa atggttcatt tttaccactt gcacatgaac gtttagacga
    12781 tgacggtcaa gtcatctttg atttactagt tgaatatgat ggtgaattac cattctggga
    12841 caaatcaagc cctgaagcga ttaaagaagt attcaatatg agtaaaggtt cattcaaacg
    12901 tgcaatcggt cacttatata aacagaagat tattaatata gaaacaggta aaatcacttt
    12961 aactaaaaaa ggttggagtc gaattgactc aaaagaataa tcatttttac acgtatcgta
    13021 ggatgcgtgt tttttatatt caatattaaa tcggacagat gaagtagttt ttgaatttca
    13081 tctgtccatt tttttgtgtt catatttaaa tttcgataat ttttcaggag cattttaatt
    13141 ttactaatga agcaatattt tttagattaa caaaaaataa tatttacatt ttcttaacaa
    13201 acatttatgt aacatttaca gtttctaaaa atgaggttaa taattcaagg ttaagataaa
    13261 gatgtaatca atacaaatac tatttgttgt tcatacaggg aggatatttc aatgaaaaaa
    13321 tggcaatttg ttggtactac agctttaggt gcaacactat tattaggtgc ttgtggtggc
    13381 ggtaatggtg gcagtggtaa tagtgattta aaaggggaag ctaaaggtga tggctcatca
    13441 acagtagcac caattgtgga gaaattaaat gaaaaatggg ctcaagatta ctctgatgct
    13501 aaaatctcag caggacaagc tggtacaggt gctggtttcc aaaaattcat tgcaggtgat
    13561 atcgacttcg ctgatgcttc tagaccaatt aaagatgaag agaagcaaaa attacaagat
    13621 aagaatatca aatacaaaga attcaaaatt gcgcaagatg gtgtaacggt tgctgtaaat
    13681 aaagaaaatg attttgtaga tgaattagac aaacagcaat taaaagcaat ttattctgga
    13741 aaagctaaaa catggaaaga tgttaatagt aaatggccag ataaaaaaat aaatgctgta
    13801 tcaccaaact caagtcatgg tacttatgac ttcttcgaaa atgaagtgat gaataaagaa
    13861 gatattaaag cagaaaaaaa tgctgataca aatgctatcg tttcttctgt aacgaaaaac
    13921 aaagagggaa tcggatactt tggatataac ttctacgtac aaaataaaga taaattaaaa
    13981 gaagttaaaa tcaaagatga aaatggtaaa gcaacagagc ctacgaaaaa aacaattcaa
    14041 gataactctt atgcattaag tagaccatta ttcatttatg taaatgaaaa agcattgaaa
    14101 gataataaag taatgtcaga atttatcaaa ttcgtcttag aagataaagg taaagcagct
    14161 gaagaagctg gatatgtagc agcaccagag aaaacataca aatcacaact agatgattta
    14221 aaagcattta ttgataaaaa tcaaaaatca gacgacaaga aatctgatga taaaaagtct
    14281 gaagacaaaa aataataaga cgcaatttca aatgtgtctt gaaacatgat tttgatggtg
    14341 aatcattatt tagagtataa agcttgattt atcgagacgc tgattttgac attcagttag
    14401 tctacaagct tatcaactta aaatagtggt tcatcattat tttacaaatc taattatttt
    14461 gggagtaata gaaagaggtt tgattatgac ttcatctact aatgttaaag ctttaattga
    14521 aaaaaataat aataaaaaag ggaagcataa tgacaaaatt ataccagtta ttttagccgc
    14581 aatttcagcg atttccattt taacaacact aggtatatta atcacattgc ttttagaaac
    14641 catcactttt ttcaccagaa ttccaataac tgaatttcta ttttctacta cttggaatcc
    14701 taccggttca gaccctaagt ttggaatctg ggcattgata atagggactt taaaaatcac
    14761 agttattgcg actatatttg cagttcctgt cgggcttggt gcagcaattt atttaagtga
    14821 atatgcaagt gaccgtgcac gacgcataat taaaccgata ttagaaattt tagcaggaat
    14881 accaacaatt gtgtttggtt tctttgcatt gacctttgtt acaccagtat taagatcttt
    14941 cataccaggt cttggagagt ttaatgctat aagtcccggc ttagttgtcg gtattatgat
    15001 tgtccctctc atcacaagtt tgagtgagga tgcaatggca tctgtaccaa ataaaattcg
    15061 agaaggtgcc tatggacttg gagcaactaa attagaagta gcaactaaag tcgtacttcc
    15121 tgcagcaaca tcaggtattg tagcttcaat cgttctcgcg atttcaagag caattggaga
    15181 aacgatgatt gtatcattag cggcaggtag ttcgccaaca gcttcattaa gtttaacaag
    15241 ttcgattcaa acaatgactg gatatattgt tgagatagcg acaggtgatg caacatttgg
    15301 atcaaatatt tattacagta tttatgctgt aggattcaca ttatttatct ttaccttaat
    15361 catgaattta ctttctcaat ggatttctaa gcgttttagg gaggagtatt aatatggaaa
    15421 cgacagataa taatagacaa tcactcgtcg atcaacaact tgtccaaaaa catttatcat
    15481 ccagaacggt taaaaataaa gtgttcaaac tcatattttt agcatgtaca ttattagggc
    15541 ttgtcgtact tattgcgttg ttaactcaaa cattgattaa agggataagt catttaaatt
    15601 tacagttttt cactaacttt tcttcttcaa caccatccat ggctggcgtt aaaggcgcgt
    15661 taataggttc actttggtta atgttaagta tcattccatt atcaatcatc ctaggaatag
    15721 gtacagctat atacttagaa gaatatgcga aaaacaacaa atttactcag tttgttaaaa
    15781 tcagtatttc caatttagct ggtgtaccat cagttgtatt tgggttatta ggttacactt
    15841 tgttcgttgg tggtgcaggg attgaagcct tgaaaatggg taacagtata ttggcagcag
    15901 cgctaacaat gaccttactg atattaccaa ttattattgt ttcaagtcag gaagcaatta
    15961 gagctgtacc taactcagta cgcgaagctt cttacggctt aggtgctaat aaatggcaaa
    16021 cgataagacg tgttgtctta ccagcagcgt tacctggtat tttaactgga ttcattttgt
    16081 ctctttcaag agcactggga gaaacagcac cacttgtgct tatcggtata ccgactatat
    16141 tattggcaac acctagaagt atattggatc aattttcagc attacctatc caaatattta
    16201 cttgggcgaa aatgcctcaa gaagaattcc agaatgttgc atcggcaggc attatcgttt
    16261 tactagttat cttaatctta atgaatggcg ttgcgattat tttacgtaac aaatttagta
    16321 aaaaattcta atttaaacaa tcaatctcat ttatctatta aaaagggagt tttaaatatg
    16381 gcgcaaacac ttgcacaaac taaacaaatt tctcaaagtc atacgtttga tgtctcacaa
    16441 agtcatcata aaacaccaaa tgatacaaac tcacattctg ttatatattc aacacaaaat
    16501 ttagacttat ggtatggcga aaatcatgca ttgcaaaata ttaatttaga tatttatgaa
    16561 aaccaaatta ctgccattat aggtccatct ggttgtggca aatcaacata tattaaaact
    16621 ttgaatcgaa tggttgagtt agtacccaca gtcaaaacag ctggtaaaat attatatcgc
    16681 gatcaagaca tttttgatca aaaatattct aaagaacaat tacgtacaaa tgtgggcatg
    16741 gtctttcaac aacctaatcc atttccaaaa tcaatatacg ataatattac ttacggtcca
    16801 aagattcacg gtattaaaaa taaaaaagtt cttgatgaaa tcgttgagaa atcattacgt
    16861 ggcgctgcaa tttgggatga attaaaggat aggttgcaca caaatgcata tagtttatcc
    16921 ggtgggcaac aacagcgtgt ttgtatcgcg cgttgtttag caattgaacc tgaagtcatt
    16981 ttaatggatg aaccgacatc agcattagat ccaatctcaa cattaagagt agaagagttg
    17041 gttcaagaac taaaagaaaa gtatacaatt attatggtta cacataatat gcaacaagca
    17101 gctcgagtat cagataaaac tgcctttttc ttaaatggtt atgtcaatga atatgatgac
    17161 actgataaaa ttttctctaa cccatcaaac aagaaaacag aagattatat ttcaggaagg
    17221 tttggttgat atataatggc aataattaga caacgatatc aggagcaact tgatgattta
    17281 ataaaagaat tacgtcggtt aggtgcaaat gtctatgtga gtattgaaaa tggtataaaa
    17341 tcattaagta ttgacgatag aggctttgca cgacaaacag ttaaaaacga taaacatatc
    17401 aatcaattaa attatgatat taatgagcga gttatcatgt taattacaaa gcaacagcct
    17461 attgcgagtg atttgcgtat gatgatttct tcattaaaaa tcgcctccga tttagaaaga
    17521 ataggagata atgcatcgag tattgccaat attcgattgc gtacaaagat tacagatgat
    17581 tatgtgttaa cccgtttaaa gacaatgggt aaactagcta tgttaatgtt aaaggattta
    17641 gatcaagcat ttaaaaagaa agataccgta ttaataagag aaataattga gcgagatgaa
    17701 gatatcgatg acttatatag tcatattatt aacgcaacgt atcttattga taacgatcca
    17761 tttgtcgctg cacaagctca tttagcagca agacatttag aacgtattgg tgatcatatt
    17821 attaacatcg ctgaaagtgt ttatttttat ttaacaggta cacattacga acaataactt
    17881 aaagttatta ctataaaatc ccttacgata aatatatata tttctattat tcataaaccc
    17941 tcaaaaaaac caagattctc acaattagta atgtgaaaat cttggtttat attgttctgc
    18001 tataaattgt ctcgcatctt agttatttgc ttgctcaatt tcatctgtta atttttcaac
    18061 ttcatccact aaatcagaaa tatattgaat tgtagattta agtggctgtt ctgtagtaat
    18121 gtctacaccg gcaatgtttg caagttcgac aggtgataca ctaccacctt ttttcaatgt
    18181 ttctaaccaa gcatcaacag ctggttggcc ttcattttta atcttttgag aaacgacagt
    18241 tccgattgtt aagccagcag aatacgtata cgaatataat cccatatagt aatgaggttg
    18301 acgcatccat gttaattcag caccctcagt catgtctact gcatctccga aaaattgttt
    18361 ataaacattt agcattattt catttaatgt cggcgcattt aaagattcac cttgatctac
    18421 tttgtgatac acttcacgtt gataagcagc ttctaataaa tgggtaacca tattatgata
    18481 atatgttcta gataaaattg agccaataac ccaacgctta aatcttggat tatcacttgt
    18541 gttaaataaa taattggcca tcaacatttc attcattgta gaaggggctt caacaaagta
    18601 cattgatgct tctgattcaa gatatggttg atgtttttga gctaatgtaa aatgacctgc
    18661 atgacctaat tcatgtgcta agacaaatgc ttcagccatt ttaccagtcc aagaaatgaa
    18721 cacatatgaa tgtgtaaagt atggacttgc acaaaatgcg cctgtatctt tacctttatt
    18781 ttgtgcaaaa tcaatccatc gctgatcgta tgcttcacgt aacatgtttg tatagtcatc
    18841 acctaaaaca cttaacgcac cgaaaatata attttttgag tcttcaattg aaatctctgg
    18901 ttcataatca gggtctacag aaatcttcaa gtcttcaaaa cgcatgttat ctaatccgtg
    18961 aatacgttgt aaaagtttag catatttctg cataactggt gccaagtcac gcataatcat
    19021 atcgatttga cggtcaaaca tatcacgggt tacttcttga ctatgtaata aataatcgat
    19081 taccgattca aatccacgta aatcagcttc aattttttct tgttgtactt gcatattata
    19141 tgtagccgcg gtagtatgct gatattttcg aatcccatcg ctaaacgatt tgaagctttt
    19201 acgtctaaaa tcaggatttt tattatcttc ataatcattt tcaaacgtag catagtcgac
    19261 agggtacgtt gtaccatcat gttcaaatga atcgaatgta atatctagca tttttgtcgt
    19321 gccgtataaa tcataaggac tgtttagcgt aggtgataaa gttgctaata cttgttctac
    19381 cgacgcagat aattggaatg gcttttgttt aattaactgt ttaatatagt gttgatatgg
    19441 acatgcttct tctaattgtt gaagtatttc ttctggtaat tcaagtattt ctgactctac
    19501 aaatgataat tggctaacaa ttttaccgta tgtagtagat aatttagcgc tcaatacttg
    19561 tgcctcaata ttactagtat ctacacttaa acgtagttct gcataattac ttaagcgatc
    19621 taaggcaatt aaaatatttt ctaattcagc taaagcagta ttaatttgtt cgattgaatt
    19681 taatgttgtt gcatatgtat gatgaaattg attggcttgt tgtactagag cgtcaatact
    19741 ttcataatat tgttgatcat ctttaaataa gtctactaaa tcccatgttt ctgaaacagg
    19801 aacatcttct cttaaaggta aaccttgaga catataatca ctcctttggt ataatacatt
    19861 cattatacat aattttatct cgtaaacgat aatgttacga tttccatgtc gcaaggaaca
    19921 atgttttttc taatagtaga tagaatattg cttgaaactg actgctattg tttaagtttt
    19981 taaaaattta taataaaatg tatacaagga aagtaatgaa ataaaaggag aatgaatatg
    20041 acattattcg atatgcctaa ttatttatgg atcacaacat taataatgat tttattaaca
    20101 atattctgtt gcttagtttt aaataaatgg tttgtatctg ctgtaattac atttgttata
    20161 ttaggtgtgc ttgcattttt tattccaaat tttcaagata taaaatatca accattatta
    20221 ggatacgctg catttttagc aatcatgagt ttattaatta gttttctatt atggtatttt
    20281 actagaaatt ggcgtaaaga aagaaaagcg cgtaaattag aaaagcaaat tgaaaaatac
    20341 ggctatgagg gcgctgaact tcgccgtaaa gataaaaaat aatattcgac aactatatgc
    20401 acaaaatcat cgacttttaa gttacactgc agtaacaatt atttcgaaag aggtggaata
    20461 cagtgctata gttgtttttg ttttgacttt tttatatttt agat
//
LOCUS       DALMNS010000045        20490 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.045, whole genome shotgun sequence.
ACCESSION   DALMNS010000045 DALMNS010000000
VERSION     DALMNS010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20490)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20490)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20490
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.045"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            218..709
                     /gene="lspA"
                     /locus_tag="O6Y56_001367"
     CDS             218..709
                     /gene="lspA"
                     /locus_tag="O6Y56_001367"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HDB5574622.1"
                     /translation="MHKKYFIGTSILIAVFVVIFDQVTKYIIATTMKIGDSFEVIPHF
                     LNITSHRNNGAAWGILSGKMTFFFIITIIILIALVYFFIKDAQYNLFMQVAISLLFAG
                     ALGNFIDRVLTGEVVDFIDTNIFGYDFPIFNIADSSLTIGVILIIIALLKDTSNKKEK
                     EVK"
     gene            709..1626
                     /locus_tag="O6Y56_001368"
     CDS             709..1626
                     /locus_tag="O6Y56_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDB5574623.1"
                     /translation="METYEFNITDKEQTGMRVDKLLPELNSDWSRNQIQDWIKAGLVV
                     ANDKVVKSNYKVKLNDHIVVTEKEVVEADILPENLNLDIYYEDDDVAVVYKPKGMVVH
                     PSPGHYTNTLVNGLMYQIKNLSGINGEIRPGIVHRIDMDTSGLLMVAKNDIAHRGLVE
                     QLMDKSVKRKYIALVHGNIPHDYGTIDAPIGRNKNDRQSMAVVDDGKEAVTHFNVLEH
                     FKDYTLVECQLETGRTHQIRVHMKYIGFPLVGDPKYGPKKTLDIGGQALHAGLIGFEH
                     PVTGEYIERHAELPQDFEDLLDTIRKRDA"
     gene            2027..2554
                     /gene="pyrR"
                     /locus_tag="O6Y56_001369"
     CDS             2027..2554
                     /gene="pyrR"
                     /locus_tag="O6Y56_001369"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HDB5574624.1"
                     /translation="MSERIIMDDAAIQRTVTRIAHEILEYNKGTDNLILLGIKTRGEY
                     LANRIQDKIHQIEQQRIPTGTIDITYFRDDIEHMSSLTTKDAIDIDTDITDKVVIIID
                     DVLYTGRTVRASLDAILLNARPIKIGLAALVDRGHRELPIRADFVGKNIPTSKEETVS
                     VYLEEMDQRNAVIIK"
     gene            2772..4079
                     /locus_tag="O6Y56_001370"
     CDS             2772..4079
                     /locus_tag="O6Y56_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HDB5574625.1"
                     /translation="MQNDEMFERTVKPVLDVNEKPQPAQWAFLSLQHLFAMFGATVLV
                     PFLTGLPISAALLASGIGTLLYILITKAQIPAYLGSSFAFITPIITGLSTHSLGDMLV
                     ALFMSGVMYVIIGILIKLSGTAWLMKLLPPVVVGPVIMVIGLSLAPTAVNMAMYENPG
                     DMKGYNISFLIVAMITLLVTIAVQGFFKGFLSLIPVLVGIIVGYVVAIFMGIVKFDAI
                     MSAKWIDFPHIYLPFKDYVPSFHLGLVLVMIPIVFVTVSEHIGHQMVLNKIVGRNFFE
                     KPGLDKSIIGDGVSTMFASIIGGPPSTTYGENIGVLAITRIYSIYVIGGAAVIAIVLA
                     FIGKFTALISSIPTPVMGGVSILLFGIIAASGLRMLVESKVDFANNRNLVIASVILVV
                     GIGNLVFNLKEIGINLQIEGMALAALSGIILNLILPKEKKQNN"
     gene            4107..4988
                     /locus_tag="O6Y56_001371"
     CDS             4107..4988
                     /locus_tag="O6Y56_001371"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HDB5574626.1"
                     /translation="MNHLLSMEHLSTDQIYKLIQKASQFKSGERQLPNFEGKYVANLF
                     FENSTRTKCSFEMAELKLGLKTISFETSTSSVSKGESLYDTCKTLESIGCDLLVIRHP
                     FNNYYEKLANINIPIANAGDGSGQHPTQSLLDLMTIYEEYGYFEGLNVLICGDIKNSR
                     VARSNYHSLKALGANVMFNSPNAWIDDSLEAPYVNIDDVIETVDIVMLLRIQHERHGL
                     AEETRFAADDYHQKHGLNEVRYNKLQEHAIVMHPAPVNRGVEIQSDLVEASKSRIFKQ
                     MENGVYLRMAVIDELLK"
     gene            5006..6280
                     /locus_tag="O6Y56_001372"
     CDS             5006..6280
                     /locus_tag="O6Y56_001372"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HDB5574627.1"
                     /translation="MKLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIID
                     AKGHFVSPGFVDVHVHLREPGGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDSVEH
                     FEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALVKEGAFAFTDDGVGVQTASMM
                     YEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLL
                     AEAAGCHYHVCHVSTKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMN
                     PPLRSTEDREALLEGLLDGTIDCIATDHAPHARDEKAQAMEKAPFGIVGSETAFPLLY
                     THFVKNGDWTLQQLVDYLTIKPCETFNLEYGTLKENGYADLTIIDLDSEQEIKGEDFL
                     SKADNTPFIGYKVYGNPILTMVEGEVKFEGDK"
     gene            6282..7382
                     /gene="carA"
                     /locus_tag="O6Y56_001373"
     CDS             6282..7382
                     /gene="carA"
                     /locus_tag="O6Y56_001373"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDB5574628.1"
                     /translation="MQSKRYLVLEDGSFYEGYRLGSDNLTVGEIVFNTAMTGYQETIS
                     DPSYTGQIITFTYPLIGNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVL
                     ELHQIPGIAGVDTRSITRKIRQHGVLKAGFTDRKEDIDQLVKHLQQVELPKNEVEIVS
                     TKTPYVSTGKDLSVVLVDFGKKQNIVRELNVRGCNVTVVPYTTTAEEILAMAPDGVML
                     SNGPGNPEVVECAIPMIQGILGKIPFFGICLGHQLFALSQGASSFKMKFGHRGANHPV
                     KNLETGKVDITSQNHGYAIDIDSLKSTDLEVTHLALNDGTVEGLKHKTLPAFSVQYHP
                     EANPGPSDSNYLFDDFVAMMTNFKEKERHINA"
     gene            7375..10548
                     /gene="carB"
                     /locus_tag="O6Y56_001374"
     CDS             7375..10548
                     /gene="carB"
                     /locus_tag="O6Y56_001374"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDB5574629.1"
                     /translation="MPKRNDIKTILVIGSGPIIIGQAAEFDYAGTQACLALKEEGYRV
                     ILVNSNPATIMTDKEIADKVYIEPLTHDFIARIIRKEQPDALLPTLGGQTGLNMAIQL
                     HESGVLQDNNVQLLGTELTSIQQAEDREMFRTLMNDLNVPVPESDIVNTVEQAFKFKE
                     QVGYPLIVRPAFTMGGTGGGICHNDEELHEIVSNGLHYSPATQCLLEKSIAGFKEIEY
                     EVMRDKNDNAIVVCNMENIDPVGIHTGDSIVVAPSQTLSDVEYQMLRDVSLKVIRALG
                     IEGGCNVQLALDPHSFDYYIIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEM
                     LNPITGTSYAAFEPTLDYVISKIPRFPFDKFEKGERELGTQMKATGEVMAIGRTYEES
                     LLKAIRSLEYGVHHLGLPNGESFDLDYIKERISHQDDERLFFIGEAIRRGTTLEEIHN
                     MTQIDYFFLHKFQNIIDIEHQLKELQGDLEYLKYAKDYGFSDKTIAHRFNMTEEEVYQ
                     LRMENDIKPVYKMVDTCAAEFESSTPYYYGTYETENESIITDKEKILVLGSGPIRIGQ
                     GVEFDYATVHAVWAIQKAGYEAIIVNNNPETVSTDFSISDKLYFEPLTEEDVMNIINL
                     EKPKGVVVQFGGQTAINLADKLAKHGVKILGTSLENLNRAEDRKEFEALLRKINVPQP
                     QGKTATSPEEALANAAEIGYPVVVRPSYVLGGRAMEIVDNDKELENYMTQAVKASPEH
                     PVLVDRYLTGKEIEVDAICDGETVIIPGIMEHIERAGVHSGDSIAVYPPQTLTEDELT
                     TLEDYTIKLAKGLNIIGLINIQFVIAHDGVYVLEVNPRSSRTVPFLSKITDIPMAQLA
                     MRAIIGEKLTDMGYQEGVQPYAEGVFVKAPVFSFNKLKNVDITLGPEMKSTGEVMGKD
                     TTLEKALFKGLTGSGVEVKDHGTVLMTVSDKDKEEVVKLAQRLNEVGYKILATSGTAN
                     KLAEYDIPAEVVGKIGGENDLLTRIQNGDVQIVINTMTKGKEVERDGFQIRRTTVENG
                     IPCLTSLDTANALTNVIESMTFTMRQM"
     gene            10658..11350
                     /gene="pyrF"
                     /locus_tag="O6Y56_001375"
     CDS             10658..11350
                     /gene="pyrF"
                     /locus_tag="O6Y56_001375"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDB5574630.1"
                     /translation="MKDLPIIALDFESKEKVNQFLDLFDESLFVKVGMELFYQEGPQL
                     INEIKERGHDVFLDLKLHDIPNTVGKAMEGLAKLNVDLVNVHAAGGVKMMSEAIKGLR
                     KHNQHTKIIAVTQLTSTTEDMLRREQNIQTSIEEAVLNYAKLANAAGLDGVVCSPLES
                     RMLTEKLGTSFLKVTPGIRPKGASQDDQHRITTPEEARQLGSTHIVVGRPITQSDNPV
                     ESYHKIKESWLV"
     gene            11350..11961
                     /locus_tag="O6Y56_001376"
     CDS             11350..11961
                     /locus_tag="O6Y56_001376"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDB5574631.1"
                     /translation="MAKEIAKSLLDIEAVTLSPNDLYTWSSGIKSPIYCDNRVTLGYP
                     LVRGAIRDGLINLIKEHFPEVEVISGTATAGIPHAAFIAEKLKLPMNYVRSSNKSHGK
                     QNQIEGAKSEGKKVVVIEDLISTGGSSVTAVEALKQAGAEVLGVVAIFTYGLKKADDT
                     FSNIQLPFYTLSDYNELIEVAENEGKISSEDIQTLVEWRDNLA"
     gene            11991..12203
                     /locus_tag="O6Y56_001377"
     CDS             11991..12203
                     /locus_tag="O6Y56_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574632.1"
                     /translation="MNDKTSNDLYGKIKHCNEFINHSNDSNLSSSHDVDESSTKQKHI
                     KNKTTINHNDDLFKHVKDILRKQGQI"
     gene            12640..13041
                     /locus_tag="O6Y56_001378"
     CDS             12640..13041
                     /locus_tag="O6Y56_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDB5574633.1"
                     /translation="MDIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPG
                     DPGTVQHSIFTLNGQVFMAIDANSGTELPMNPAISLFVTVKDTIEMERLFNGLKDEGA
                     ILMPKTNMPPYREFAWVQDKFGVSFQLALPE"
     gene            complement(13505..15202)
                     /locus_tag="O6Y56_001379"
     CDS             complement(13505..15202)
                     /locus_tag="O6Y56_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HDB5574634.1"
                     /translation="MAYDGLFTKKMVESLQFLTTGRVHKINQPDNDTILMVVRQNRQN
                     HQLLLSIHPNFSRLQLTTKKYDNPFNPPMFARVFRKHLEGGIIESIKQIGNDRRIEID
                     IKSKDEIGDTIYRTVILEIMGKHSNLILVDENRKIIEGFKHLTPNTNHYRTVMPGFNY
                     EAPPTQHKMNPYDITGAEVLKYIDFNTGNIAKQLLNQFEGFSPLITNEIVNRRQFMTS
                     STLPEAFDEVMAETKLPPTPIFHKNHETGKEDFYFIKLNQFNDDTVTYDSLNDLLDRF
                     YDARGERERVKQRANDLVRFVQQQLHKYQNKLAKLIEEYEQSKNKDTEQLYGELITAN
                     IYRIKQGDKEVTALNYYTNEEVVIPLNPTKSPSANAQYYYKQYNRMKTRERELQHQIQ
                     LTKDNIDYFSTIEQQLHHISVHDIDEIRDELAEQGFMKQRKNQTKKKKEQIQLQHYVS
                     TDGDDIYVGKNNKQNDYLTNKKAKKTHTWLHTKDIPGSHVVIFNDAPSDTTIKEAAML
                     AGYFSKAGNSGQIPVDYTLITNVHKPSGAKPGFVTYDNQKTLYATPDYEHIQKMKQS"
     gene            15477..16100
                     /gene="gmk"
                     /locus_tag="O6Y56_001380"
     CDS             15477..16100
                     /gene="gmk"
                     /locus_tag="O6Y56_001380"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDB5574635.1"
                     /translation="MDNEKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQ
                     MREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFL
                     EIEVEGAKQVRKKFPDALFIFLAPPSLDHLRERLVGRGTESDEKIQSRINEARKEVEM
                     MNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERVEAKYRKMILEAKK"
     gene            16100..16318
                     /locus_tag="O6Y56_001381"
     CDS             16100..16318
                     /locus_tag="O6Y56_001381"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDB5574636.1"
                     /translation="MLNPPLNQLTSQIKSKYLIATTAAKRAREIDEQPETELLSEYHS
                     FKPVGRALEEIADGKIRPVISSDYYGKE"
     gene            16534..17733
                     /gene="coaBC"
                     /locus_tag="O6Y56_001382"
     CDS             16534..17733
                     /gene="coaBC"
                     /locus_tag="O6Y56_001382"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDB5574637.1"
                     /translation="MKKILLAVTGGIAAYKAIDLTSKLTQSGYEVRVMLTNHAQKFVT
                     PLAFQAISRNAVYTDTFIEENPSEIQHIALGDWADAIIVAPATANTIAKLSVGIADDL
                     VTSTLLATETPKFIAPAMNVHMYENKRTQQNINILKEDGYHFIEPGSGFLACGYVAKG
                     RMEEPLQIVSVIDAHFQNSNRLANSSFQDKRALVTAGPTIEVIDPVRFVSNRSSGKMG
                     YAIAEALRNRGAIVTLVAGPTTLEDPKDIEVIHVQSAEEMFEQVTSRFEEQDIVVKAA
                     AVSDYTPVDVLEHKMKKQDGDLSVSFKRTKDILKYLGEHKTSQYLIGFAAETEDIENY
                     AQQKLRKKNADVIISNNVGDMSIGFSSDDNELTMHFKNNEKVNIKKGKKVVLAAQILD
                     ELETRWQ"
     gene            17733..20141
                     /gene="priA"
                     /locus_tag="O6Y56_001383"
     CDS             17733..20141
                     /gene="priA"
                     /locus_tag="O6Y56_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDB5574638.1"
                     /translation="MIAKVIVDVASKSVDYKFDYIIPEQLESVIQPGVRVIVPFGPRT
                     IQGYVMEVTAEPDAQLDVSKLKKIIEVKDIQPELTSELIALSEWMGSTHVIKRISMLE
                     VMLPSAIKAKYKKAFKMKDDIELPSALLQKFDKHGYYYYKDAQKNNDIQLLMKLLKDD
                     IVEEKTILTQNITKKTKRAVRVIEGYHPDEVLAKLEKVIKQYDLYAYLSEEQHKTIFL
                     TDIEDMGFSKSSLDGLIKKGYVEKYDAVVERDPFKDRVFEQESKQQLTEDQYKAYEAI
                     KAKIVSQEQETFLLHGVTGSGKTEVYLQTIEDVLSQGKQAMMLVPEIALTPQMVLRFK
                     RRFGDDVAVLHSGLSNGERYDEWQKIRDGRARVSVGARSSVFAPFKNLGLIIIDEEHE
                     STYKQEDYPRYHAREIAQWRSEYHHCPVILGSATPCLESYARAEKGVYHLLSLSNRVN
                     QQALPEIDIVDMREELSEGNRSMFSKDLREAIQLRLDRQEQVVLFLNRRGYASFMLCR
                     DCGYVPQCPNCDISLTYHKTTDLLKCHYCGYQETPPNQCPNCESEHIRQVGTGTQKVE
                     ELLQQEFEDARIIRMDVDTTSKKGAHEKLLTEFEKGNGDILLGTQMIAKGLDYPNITL
                     VGVLNADTMLNLPDFRASERTYQLLTQVAGRAGRHEKAGQVIIQTYNPDHYSILDVQK
                     NDYLTFYRQEMEYRKLGKYPPYYYLINFTISHKEMKKVMEASQHVHKILLQHLTEKAL
                     VLGPSPAALARINNEFRFQILVKYKSEPGLLQAIQFLDDYYHEKFIKEKLALKIDIDP
                     QMMM"
BASE COUNT         7260 a         2958 c         3843 g         6429 t
ORIGIN      
        1 ttagggattt atgtcccagc ctgtttccta atttttaatg tcatcttaaa tatgataaat
       61 gaataattaa gttcatattt aatgtcaaaa catagtagtt tatcaagtat tgagttagta
      121 acattagatt taatgtaata tgcttacttt ttttattagc aggtgtaagc tataatataa
      181 agagttgtct tatggacgat tgattggagg aacgaaaatg cacaaaaaat attttattgg
      241 cacttccatt ttaatagcag tatttgtcgt tatatttgac caagttacta aatatattat
      301 agctactaca atgaaaattg gagattcatt tgaagtgata ccgcactttt taaacataac
      361 atcacatcga aataatggtg ctgcatgggg aatattgagt ggaaaaatga catttttctt
      421 tattattacc attattatat taatagcctt agtatatttc tttattaaag atgctcaata
      481 taatttgttt atgcaagttg ctattagttt actttttgca ggtgcacttg gaaactttat
      541 tgatagagtt ttaacaggag aagttgttga ctttattgat acaaatattt ttggttatga
      601 ttttccaata tttaatatcg cagattcaag tttaacaatt ggtgtaatat taattattat
      661 tgccttatta aaggatactt ccaataaaaa ggagaaggag gttaagtaat ggagacttat
      721 gaatttaaca ttacagataa agaacaaaca ggtatgcgtg tagataagtt gctgcctgaa
      781 ttaaatagtg attggtctcg taaccagata caagattgga ttaaagcagg tttagtcgtt
      841 gcaaacgata aagttgttaa atctaattat aaagtgaaac ttaatgatca tatagttgtc
      901 actgaaaaag aagtggttga agctgatatt ctacctgaaa atttaaattt agatatttat
      961 tatgaagatg acgatgttgc agttgtatat aaaccgaaag gcatggtagt tcatccatca
     1021 ccaggtcatt ataccaatac attagttaat ggtttaatgt atcaaattaa aaatttgtcg
     1081 ggtattaatg gagaaattcg tccaggtatt gttcaccgta tagatatgga tacttctggt
     1141 ttattaatgg ttgctaaaaa tgatattgct catcgtggac ttgtagaaca attaatggat
     1201 aaatctgtta aaagaaaata tatcgcttta gttcacggga atattcctca tgattacggt
     1261 acaatcgatg cgccaattgg tagaaacaaa aatgatcgtc aatctatggc tgttgttgat
     1321 gatggtaagg aagcagtgac acattttaac gtactagaac attttaaaga ttatacgctt
     1381 gttgaatgtc aacttgaaac aggacgtacg catcaaatcc gtgtgcacat gaaatatatt
     1441 ggcttcccat tagttggtga tcctaagtat ggaccgaaaa agacattgga tattggtggt
     1501 caagctctac atgctggact tattggattc gaacatccag taacaggtga atatattgaa
     1561 agacatgctg aattaccaca agactttgaa gatttattag atacaattcg aaaaagagat
     1621 gcataattgt gttgtgctat aattacgata acattattat gtaaactata agtatttatc
     1681 gttttcgttt ttttaaaatg aaaacacatt ataaaataga ttaaggttaa catttttact
     1741 gagatcggtt aatttttcaa tatagattga caaagcgcct gattagtatt atccttataa
     1801 cagtttaagt acaacataaa gagtctttaa ttgagggtcc agagagacgt caaagacatg
     1861 aaaatataga tatatactaa aatgaatcat aacactttca catatgcaag aataagtagt
     1921 aatactacga ttcttctatg taaataggct gattgtatat actaaacctc atgtcgatat
     1981 taaagacatg aggttttttg tttctaaatt ttgaaagggt gagaatatgt ctgaacgtat
     2041 cataatggat gatgccgcaa tacaacgtac agtgacgaga atcgctcatg aaattttgga
     2101 gtataacaaa ggtactgata atttaattct tttaggtatc aaaacaagag gtgaatattt
     2161 agcgaatcgt atacaagata aaattcatca aattgagcaa caacgtatac ctactggaac
     2221 aattgatatt acatacttta gagatgatat agagcacatg tcatcactta cgacaaaaga
     2281 cgcaatagac atcgacacag atattacaga taaagtagtc atcattattg atgatgtgct
     2341 gtatactggt cgaacggttc gtgcttcact tgatgctatt ttgctaaatg ctagacctat
     2401 taaaattggt ttagctgctt tggttgatcg aggacatcgt gagttaccaa ttcgagcaga
     2461 ttttgttggt aaaaatatac ctacttctaa agaggaaacg gtaagtgtct atttagaaga
     2521 aatggatcaa agaaatgcag ttataattaa ataatacccc ttttaattca gtacgagaga
     2581 ctgaaaaagg tgggggagtt gaatgataaa taagttttca tatgcttgtt tatctaataa
     2641 taccctcatg ttcgacaact ataagtcaat ttctatggac gaaaatgact tgtagcaact
     2701 tgtcacactt tttgtctctt tacatatact gatgtaaaga gattttttta ttatcggagg
     2761 aaatgaatat tatgcaaaat gatgaaatgt ttgaacgaac agtaaaacct gtactagatg
     2821 taaatgaaaa accacaacca gcgcaatggg catttttaag cttacaacat ttatttgcga
     2881 tgtttggcgc aacagtacta gtaccattct taacaggatt accaatatcc gcagcgttac
     2941 tagcttcggg aatcggtaca ttactttata tcttaataac gaaggcacaa ataccagcat
     3001 acttgggatc tagctttgca tttatcacac caattatcac gggattaagt acgcatagct
     3061 taggagacat gcttgtagca ttattcatga gtggtgttat gtacgtcatc attgggattc
     3121 taatcaaatt aagtgggaca gcatggttaa tgaaattatt accaccagtt gttgtaggac
     3181 cagtcatcat ggtaattggt ttaagcttag cgcctactgc agtcaatatg gcaatgtatg
     3241 aaaatcctgg agatatgaaa ggttacaata tcagtttctt aattgttgca atgataacct
     3301 tgcttgtaac aatagccgtt caaggatttt ttaaaggatt cctatcttta attccagtac
     3361 ttgtaggtat tatcgtaggt tatgtggtag cgatttttat ggggattgtg aaatttgatg
     3421 caattatgtc agcaaaatgg atagatttcc ctcatattta tctgccattt aaagattatg
     3481 taccttcatt tcacttagga cttgtacttg taatgattcc gattgtgttc gtaacagtaa
     3541 gtgaacatat tgggcaccaa atggtactga ataaaatcgt aggtagaaac ttctttgaaa
     3601 agccaggact tgataaatca atcattggtg atggtgtttc tacaatgttt gccagtatta
     3661 ttggtggacc accaagtaca acatatggtg aaaatatcgg tgtattagcg attacaagaa
     3721 tatacagtat ttacgtcatt ggtggtgcag cagttatagc aattgtttta gcattcattg
     3781 gtaagttcac tgcattaatt tcttctatac ctacaccagt tatgggagga gtatctatat
     3841 tacttttcgg tattattgca gcaagtggct taagaatgtt agttgaaagc aaagtagatt
     3901 ttgcgaacaa tcgaaattta gttatagctt cagtaatttt agttgtaggt atcggtaatt
     3961 tagtatttaa cttaaaagaa attggtatca accttcaaat tgaggggatg gcattagctg
     4021 cactttcagg aattattttg aacttaatct tacctaaaga gaaaaaacaa aacaattaag
     4081 atttacaaat taaggagggc gcttttatga atcatttatt atcaatggaa catttatcta
     4141 cagatcaaat atacaaactt atccaaaagg caagtcaatt taagtctggt gaacgtcaac
     4201 taccaaactt tgaaggaaaa tatgtcgcaa atttattctt tgaaaattct actcgaacaa
     4261 aatgtagttt tgaaatggca gaacttaagc tagggttaaa aacgattagc tttgaaacat
     4321 caacatcatc tgtttcaaaa ggtgaatctt tatatgacac atgtaaaact ttagaaagta
     4381 ttggctgtga tttattagtc attagacatc cgtttaataa ctactatgaa aaattagcga
     4441 atattaacat cccaattgcg aatgctggtg atggtagtgg acaacatcca acacaaagtt
     4501 tgcttgattt aatgacgata tatgaagaat atggatattt tgaaggcttg aatgtattga
     4561 tttgtggaga cattaaaaat tcacgtgtcg cacgtagtaa ttaccatagt ttaaaagcat
     4621 taggtgcaaa cgtaatgttt aatagcccaa atgcttggat tgatgattct ttagaagcac
     4681 cttatgtaaa tatagatgat gttatagaaa cagtagatat agttatgtta ttaagaattc
     4741 aacatgaaag acatggtctt gcagaagaaa ctagatttgc agcagatgat tatcatcaaa
     4801 agcatggctt aaatgaagtg cgctataaca aattacaaga acatgctatt gttatgcatc
     4861 cggcacctgt gaatagagga gtagaaatac aaagcgattt agtagaagct tcaaaatcaa
     4921 gaatttttaa gcaaatggaa aatggcgttt acttaagaat ggcagtcatt gatgaattat
     4981 taaaataggt aaggggacga aaatgatgaa attaattaaa aacggtaaag tattacaaaa
     5041 tggcgaatta caacaagcag atattttaat tgatggtaag gtaattaaac aaattgcacc
     5101 tgcaattgaa ccaagcaatg gtgttgacat catagatgcg aaaggtcact ttgtgtcacc
     5161 tggatttgtc gatgttcatg ttcatttacg cgaacctggt ggtgaatata aagagacaat
     5221 tgaaactggt actaaagctg ctgctagagg tggatttaca actgtatgtc caatgcctaa
     5281 cacaagaccg gtaccagatt ctgtagaaca ttttgaagct ttacaaaaat taatcgatga
     5341 caatgctcaa gtacgtgtat taccttatgc ttcaattaca acacgtcaat taggtaaaga
     5401 attggttgat ttcccagcac tagtaaaaga aggtgccttt gcgtttacag atgacggtgt
     5461 aggagtacaa actgcaagca tgatgtatga aggcatgatt gaagctgcaa aagtaaacaa
     5521 agccatcgtt gcacactgtg aagataattc attaatctat ggtggtgcaa tgcatgaagg
     5581 gaaacgcagt aaagagttag gtataccagg tattccaaac atttgtgaat ctgttcaaat
     5641 cgcaagagat gtactattag ctgaagcagc aggttgtcat tatcatgtat gtcatgtttc
     5701 tactaaagaa agtgttagag tcattcgtga tgctaaacgc gcaggcattc atgttacagc
     5761 tgaagttaca ccacaccatt tattgttaac agaagatgat attcctggta acaatgccat
     5821 ttataaaatg aatccaccat tgagaagtac tgaagataga gaggctttgt tagaagggtt
     5881 actagacggt acaattgact gtatcgcaac agaccatgca ccacatgcgc gtgatgaaaa
     5941 agcacaagca atggaaaaag caccattcgg aattgttggt agtgaaacag cattcccatt
     6001 attatatacg cattttgtaa aaaatggtga ttggacatta caacaattag tagattactt
     6061 aacaattaaa ccatgtgaga catttaattt agaatacggc acattaaaag aaaatggtta
     6121 tgcagattta acaatcattg atttagatag tgaacaagaa attaaaggtg aagatttctt
     6181 atcaaaagca gataatacac catttatcgg ctataaagtt tatggaaatc cgatcttaac
     6241 aatggttgaa ggcgaagtta aatttgaggg ggataaataa tatgcaaagc aaacgttatc
     6301 tagtgttaga agacggttct ttttacgaag gttaccgttt aggatctgat aacttaactg
     6361 taggagaaat tgtatttaat acagcgatga caggttatca agaaactatt tcagatccat
     6421 catatacagg tcagatcatt acttttacgt atccattaat cggtaattat ggtatcaata
     6481 gagacgattt tgaatcatta gtacctacat taaacggtat tgtagtgaaa gaagcgagtg
     6541 cgcatccaag taattttaga caacaaaaga cacttcatga cgttttagaa ttgcatcaaa
     6601 ttccagggat tgcaggtgtt gatacaagaa gtattacgcg taaaattcga caacacggtg
     6661 tgttaaaagc tggttttact gatcgaaaag aagatattga tcaacttgtc aaacatttac
     6721 aacaagtaga attacctaaa aacgaagtag aaatcgtttc gactaaaaca ccgtatgttt
     6781 cgacaggtaa ggatctaagt gtcgtacttg tagactttgg taagaagcaa aatattgttc
     6841 gagaattaaa cgtcagaggt tgtaacgtca cagttgtacc atatacaact actgccgaag
     6901 aaattttagc aatggctcca gatggcgtta tgctatcaaa cggaccaggt aatcctgaag
     6961 ttgtagaatg tgcgattcca atgattcaag gaattttagg gaaaattccg ttctttggta
     7021 tctgtctagg acatcaactt tttgcattat ctcaaggagc aagctcattt aaaatgaagt
     7081 ttggtcatcg aggtgcgaac catccagtta aaaatttaga gactggaaaa gttgatatta
     7141 cgagtcaaaa ccatggatat gcaatagata tagattcgtt aaaaagtact gatttagaag
     7201 ttactcatct tgcattaaat gatggtactg tagaaggttt aaaacataaa acattaccag
     7261 cattttctgt tcaataccat cctgaagcaa atccaggacc gtcagattca aactatctat
     7321 ttgatgattt tgtagcaatg atgactaatt ttaaggaaaa ggagcgtcat atcaatgcct
     7381 aaacgtaatg atatcaaaac aattttagta atagggtctg ggccaattat cataggtcaa
     7441 gcagctgaat ttgattatgc tggaacacaa gcatgtctag ctttaaaaga agagggatac
     7501 cgagttattc ttgtaaattc aaatccagcg acaatcatga ctgataagga aattgcggat
     7561 aaagtatata ttgaaccgtt aactcatgat tttatagcgc gaattatacg taaagagcaa
     7621 cctgacgctt tacttccaac tttaggtggt caaacaggtt taaatatggc gattcaacta
     7681 cacgaaagtg gtgtgcttca agataataac gtccaattat taggaactga gctaacatca
     7741 attcaacaag cagaagaccg tgaaatgttt agaacattaa tgaatgattt aaacgttcct
     7801 gtgccagaga gtgacattgt aaatacagta gaacaagcct ttaaattcaa agagcaagtg
     7861 ggatacccgc taattgttag accagcattt acgatgggtg gtaccggagg cggtatttgt
     7921 cataatgatg aagaattaca tgaaatcgtc tcaaatggtc ttcattatag tccagcaact
     7981 caatgtttat tagaaaaatc tatcgcaggt tttaaagaaa tcgaatacga agtaatgcgt
     8041 gataaaaacg ataatgccat cgttgtatgt aacatggaaa atattgatcc agttggtatt
     8101 catacaggcg attcaattgt tgtggctcct agccaaacat tatcagatgt tgagtatcaa
     8161 atgttacgtg atgtttcatt aaaagttatt cgagctttag gtatcgaagg tggttgtaat
     8221 gttcaattag cattagatcc gcattcattc gattattata ttatagaagt aaatccgcgt
     8281 gtatcacgtt catcagcgtt agcttcaaaa gcaacaggat atcctattgc aaaattagca
     8341 gctaaaatcg cggttggtct aacattagat gaaatgttaa atccaattac aggaacatct
     8401 tatgcagcgt ttgaaccaac tttagactat gtgatttcaa aaataccaag atttcctttt
     8461 gataaatttg aaaaaggaga acgagagctt ggcacacaaa tgaaagcaac aggtgaagtt
     8521 atggccattg gtcgaactta cgaagaatca ttgttaaaag caattcgatc acttgagtat
     8581 ggtgtgcatc acttaggatt accaaatggt gaaagcttcg atcttgatta tattaaagaa
     8641 cgtatttcac accaagatga tgaacgatta tttttcatcg gcgaagcaat tagaagaggc
     8701 acaacattag aagaaattca taatatgact cagatagatt acttcttctt acacaagttc
     8761 caaaacatta ttgatattga gcatcaatta aaagagcttc aaggtgattt agaatatctt
     8821 aaatatgcaa aagattatgg atttagtgat aaaacaatag cgcatcgctt taatatgacg
     8881 gaagaagaag tatatcaatt gcgtatggaa aatgatatta aacctgttta caagatggtt
     8941 gatacttgcg cagctgaatt tgaatcttca acaccatatt attatggtac atatgaaact
     9001 gaaaatgaat ccataattac tgacaaagaa aaaatcttag tattaggctc tggaccaatt
     9061 cgaatcggcc aaggtgtaga atttgactat gcgacagttc acgccgtttg ggcaattcaa
     9121 aaagcagggt acgaagcgat aattgtgaat aacaatccag aaacagtatc aacagacttc
     9181 tcaatttctg acaaattata ctttgaacct ttaactgaag aagatgtgat gaatatcatt
     9241 aatttagaaa aacctaaagg tgtcgttgta caatttggag gacaaacagc gattaattta
     9301 gcagacaaat tggctaaaca tggtgttaaa atacttggta cttcactaga aaatctaaat
     9361 cgtgctgaag atagaaaaga atttgaagca ctattaagaa aaattaacgt gccacagcca
     9421 caagggaaaa cagctacctc acctgaggaa gcattagcga atgctgcaga aatcggatat
     9481 ccggttgtag taagaccttc ttatgtatta ggtggtcgcg caatggaaat tgtagacaat
     9541 gacaaagagt tagaaaacta tatgacccag gctgtaaaag cgagtccgga acatccggta
     9601 ctagtcgata gatatttaac tggtaaagaa attgaagttg atgcgatttg tgatggagaa
     9661 acagtcatta ttccaggaat catggaacat attgaacgtg ctggtgtgca tagtggtgac
     9721 tcaatcgctg tatatccgcc acaaactttg acagaagacg agttaacaac acttgaggac
     9781 tatactataa aattagctaa aggtttaaac atcattggct taatcaacat tcaattcgtt
     9841 atagctcacg atggtgtgta tgttttagaa gtaaatccac gttctagtag aacggtacca
     9901 ttcttaagta aaattactga tattccaatg gcacaattag ctatgcgagc aatcattggg
     9961 gaaaaactaa cagatatggg ttatcaagaa ggggttcaac catatgctga gggtgtattt
    10021 gtgaaagcac cggtatttag ttttaataaa ttgaaaaatg ttgatattac tttaggacct
    10081 gaaatgaagt ctacaggaga agtaatgggg aaagatacaa cattagaaaa ggcgttattc
    10141 aaagggttaa caggtagtgg tgttgaagtt aaagatcacg gtacagtatt aatgaccgtc
    10201 agtgacaaag ataaagagga agttgttaaa ttggcacaac gcttaaatga agttggctat
    10261 aaaattttag caacgtctgg aacagctaat aaattagctg agtatgacat acctgcagaa
    10321 gtagtaggca aaattggtgg cgaaaatgat ttattaacac gtattcaaaa tggtgatgtt
    10381 caaatcgtta taaatacaat gactaaaggt aaagaagtag aaagagatgg cttccaaatt
    10441 agacgtacta cagttgaaaa tggtattcca tgtttgacat ctttagatac agctaatgcc
    10501 ttaacaaatg taattgaaag tatgacattt acaatgcgtc aaatgtaaat caatcaaact
    10561 gtatcggtgg ggctgtaatt aaccatttac ttaaagaagt ttatattaca gcctcattat
    10621 tttaatgaat ttcttaacgt aaagggagac atatatgatg aaagatttac caattattgc
    10681 attagatttt gaatcaaaag aaaaagtaaa tcaattttta gatttatttg atgaatcatt
    10741 attcgtaaaa gtaggtatgg aacttttcta tcaagaaggt cctcaattaa ttaatgagat
    10801 aaaagaaaga ggccatgatg tatttttaga tttaaaactg catgatattc ctaatacagt
    10861 tggtaaggcg atggaaggac tagctaaatt gaatgttgat ctggtaaatg ttcatgctgc
    10921 tggtggcgta aaaatgatgt ctgaggccat taaaggatta agaaaacata atcaacatac
    10981 aaaaattatt gcagtaacac agcttacgtc aacaacagaa gacatgttac gacgcgaaca
    11041 aaatatacaa acatcgattg aagaggccgt tttaaattat gccaagttag caaatgcagc
    11101 tggtttagat ggcgttgttt gttcacctct tgaaagtcgt atgttgactg aaaagttagg
    11161 tacatcattt ttaaaagtaa caccaggcat tagacctaaa ggtgcatctc aagatgacca
    11221 acaccgtatt acgacaccgg aagaagcaag acagcttggt tcgacgcata ttgtagtcgg
    11281 tagaccgatt acacaaagtg acaatccagt cgaaagttat cataaaatta aagaaagttg
    11341 gttagtataa tggctaaaga aattgcaaaa tcattattag atattgaagc tgtaacatta
    11401 tcaccaaatg atttatatac atggagttca ggcattaaat caccgattta ctgtgataac
    11461 cgtgttacgt taggttatcc tttagttcga ggcgcaatcc gcgatggttt aattaactta
    11521 attaaagaac actttcctga agtagaagtt atttctggta ctgcaacagc tggtattcca
    11581 catgcagctt ttattgctga aaaattaaaa ttaccaatga attatgttcg ttcatcaaat
    11641 aaaagtcatg gtaagcaaaa tcaaatcgaa ggtgctaaaa gcgaaggtaa aaaagtagtt
    11701 gtgatagaag atttaatttc gacaggggga tcttcagtca cagcagttga agccttaaaa
    11761 caagcaggtg cagaagtatt aggtgttgta gctatcttta cttacggttt gaaaaaagca
    11821 gatgatacat ttagcaatat tcaactgcct ttttacactt taagtgatta caatgaatta
    11881 attgaagtag ctgaaaatga aggtaaaatt tctagtgaag atatccaaac attagttgaa
    11941 tggagagaca acttagcata atatagacac tagaaggagg aattcaacaa atgaatgaca
    12001 aaacatctaa tgatttatat gggaagataa aacattgtaa cgaatttatc aatcattcaa
    12061 atgattccaa tctatctagt agtcacgatg tcgacgaaag ttcaacgaag caaaagcata
    12121 taaaaaataa aacaactata aatcataatg atgatttatt taaacatgta aaggatatat
    12181 tacgtaaaca aggacaaatt taaaaacaaa aaagctatag tgtttaatat caggggctgc
    12241 ttaaccgcat ccgaatatta caaacactat agcttttatt atataaaaaa attattagcg
    12301 gataattaac tttattaaaa tccaaccaat taagaatacg agtaatagga ctaatactgg
    12361 aatcacataa tgtaacataa cgtccctcct ttaacttaat tttaattgta atcaaatttg
    12421 acaataagtc aaaacattaa tacctatgat aagtatcatt tattaacata tgtatcatat
    12481 ttttaatctt gcgtaatttt tatcgttaac tatgtgattt aatcaacagg ctaataagac
    12541 atttgtcatt cgtgcaaata acggtacgac gcgcttttgt cattttaatt atgttaagat
    12601 aatagtagtt atagaagttc aatctatagg aggcatagca tggatattcc aaaaattacg
    12661 acatttttaa tgtttaataa ccaagctgaa gaagctgtta aactatacac aagcttattt
    12721 gaagatagtg agattataac aatggctaag tatggtgaaa atggacctgg tgatcctggg
    12781 actgtacaac actcaatatt tacattaaat ggacaagtat tcatggcgat tgatgctaat
    12841 agtggcacag aattaccaat gaatcctgcg atttcattat ttgttacagt aaaagatact
    12901 attgaaatgg aacgactatt taatggatta aaagatgaag gtgccatttt aatgccaaaa
    12961 acgaatatgc caccatacag agagtttgct tgggttcaag ataagtttgg agtaagtttt
    13021 caattagcat tacctgagta aaaggattcg tacagcgttg aatgataaag aaacactttt
    13081 tccctttata cttaattttc tcaagtttac cgtcaaatat aatattttta tatttcaaat
    13141 caaaggtatt tagtataaca ttgttcatag gcgcattatc tcctttagtt atttgtttag
    13201 gcacttttaa ttatagggat aattgcgctt tttttatatt caaaatcaaa aaatcggaca
    13261 gatgaaaagt aaaatacttt ttccatcagt ccgatttatt atagaaccat aaatcaatag
    13321 tagttcttta ttattttagt ttcactcatt tttaaaatca caaagataat ttgtaactta
    13381 aatgatgatg cgttattaaa aaacacgata cttcgtttca atgaacgcat taaattaaaa
    13441 aaaacacctc gcaaaagaaa gtaggccttt cttatggtga ggtgtttatt tgtcgacaac
    13501 ttgattatga ttgtttcatt ttttgaatat gttcataatc aggtgtagca tacaaagttt
    13561 tttgattgtc atatgttaca aacccaggct ttgcacctga tggtttgtgc acatttgtaa
    13621 ttaacgtgta atcaacaggt atttgtccag aattaccagc ttttgaaaaa tatcctgcta
    13681 acatagccgc ttccttgatt gtcgtatcac ttggtgcatc attaaatata acgacatgtg
    13741 aacccggaat atcttttgtg tgtaaccatg tgtgagtttt tttagctttt ttatttgtta
    13801 aataatcatt ttgcttgtta ttcttgccaa catatatatc gtcgccatca gttgatacat
    13861 aatgttgtaa ttgaatctgc tctttctttt tcttagtttg atttttacgc tgtttcataa
    13921 agccttgttc tgctaattca tctctaattt catcaatgtc atggacagaa atatgatgta
    13981 attgttgttc gattgttgaa aaataatcta tattgtcttt cgtcaattga atttgatgtt
    14041 gtaattcacg ttctctcgtt ttcatacgat tatattgttt ataataatat tgagcatttg
    14101 cagatgggga ttttgtagga tttaaaggaa tgacaacttc ttcattcgta taataattca
    14161 atgccgttac ttctttatcg ccttgcttaa ttcgatatat attagcagtg atcaattcac
    14221 catataactg ttcagtatct ttatttttag actgctcata ttcttcaatc aacttcgcta
    14281 atttattttg atatttgtgc aactgctgtt gaacaaatcg aactaaatca ttcgcacgtt
    14341 gtttaacgcg ttcacgttcg ccacgcgcat cataaaaacg atcaagtaaa tcatttaatg
    14401 aatcgtacgt aactgtatca tcattaaatt gatttaactt tataaaatag aaatcctctt
    14461 tacctgtttc atgattttta tgaaaaatag gagtaggtgg taacttggtt tctgccatta
    14521 cttcatcgaa tgcttctggt aatgttgatg aagtcataaa ttgacgacga ttaacgattt
    14581 cattcgtaat taaagggcta aatccttcaa actgattcaa taattgttta gcaatattac
    14641 ctgtgttaaa atcgatatat ttcaacacct ctgcacctgt aatatcatac ggattcattt
    14701 tgtgctgagt aggtggtgct tcataattaa aacctggcat tactgtacga tagtgattcg
    14761 tatttggtgt taagtgttta aatccttcaa ttattttgcg attttcatct actaaaatta
    14821 agttactatg tttacccata atctccagga tgacagtacg gtaaatagta tcgccaattt
    14881 catctttact ctttatatcg atttcaatac gacgatcatt accaatttgc ttaatcgatt
    14941 cgataatacc accttctaag tgttttctaa aaacacgcgc aaacatgggt ggattaaatg
    15001 gattatcata tttttttgta gtcaattgta atcttgaaaa gtttggatgg attgacaata
    15061 acaattgatg gttttgtcta ttttgacgta caaccattag tatcgtgtca ttatcaggtt
    15121 gattgatttt gtgaacgcgt ccagttgtta aaaattgtaa agactcaacc attttctttg
    15181 taaataagcc atcataagcc ataatttatc ttccaccttc ttcatatcat tcgtttcatt
    15241 ttaacatgat tgtaactttt cggtatagtt attgaatcat acattatgcc acacatttta
    15301 cattatctaa aagttcgcaa ttcaatttat ttaattaaaa ttaatcgtgc aatataacga
    15361 tattgttaga cctaatagaa attatggcat gcaatttcaa atatgctata caatataaag
    15421 aacaatgtga tatcatattt aaataataga agattagctt agagaggtcg taaggcatgg
    15481 ataatgaaaa aggattgtta atcgttttat caggaccatc tggagtaggt aaaggtactg
    15541 ttagaaaacg aatatttgaa gatccaagta catcatataa gtattctatt tcaatgacaa
    15601 cacgtcaaat gcgtgaaggt gaagttgatg gcgtagatta cttttttaaa actagggatg
    15661 cgtttgaagc tttaattaaa gatgaccaat ttatagaata tgctgaatat gtaggcaact
    15721 attatggtac accagttcaa tatgttaaag atacaatgga cgaaggtcat gatgtatttt
    15781 tagaaattga agtagaaggt gcaaagcaag ttagaaagaa atttccagat gcgttattta
    15841 ttttcttagc acctccaagt ttagatcact tgagagagcg attagtaggt agaggaacag
    15901 aatctgatga gaaaatacaa agtcgtatta acgaagcacg taaagaagtc gaaatgatga
    15961 atttatacga ttacgttgta gttaatgatg aagtagaact tgcgaagaat agaattcaat
    16021 gtattgtaga agctgagcac ttaaaaagag agcgcgtaga agctaagtat agaaaaatga
    16081 ttttggaggc taaaaaataa tgttaaatcc accattaaac caattaacgt cacaaattaa
    16141 atcaaagtat ttaattgcaa caactgcagc gaaaagagcg cgtgaaattg atgaacaacc
    16201 tgaaactgaa ttattaagtg aatatcattc atttaaacca gttggtagag cgttagaaga
    16261 aattgctgac ggtaaaattc gccctgttat ttcaagtgat tattatggta aagaatagtt
    16321 tcgaccatta aaaatatgtg aagcaagacg tacatcaaat acgtcaaggc atatccaaat
    16381 caaacgcacc tatgtaggtg tgttttttta gtttatccaa tgattgatgt tataataata
    16441 ctaaatttgt atctataaaa aagtaatgag catttgtgcg catatgatga tgtaaagcgt
    16501 aaatgtcata gtgatattta agggagattg aatatgaaga aaattttatt agccgttaca
    16561 ggtggcattg cggcatataa agcgattgat ttgacaagta agttaacaca atctggatat
    16621 gaagttcgcg ttatgttaac gaatcacgcg caaaaatttg tgacaccatt agcatttcaa
    16681 gcaataagtc gaaatgctgt ttatacagat acttttatag aagaaaatcc ttcagaaata
    16741 cagcatattg cattaggtga ttgggcagat gcaatcattg ttgcacctgc aacggcaaat
    16801 acaattgcaa aattgagtgt aggtattgct gatgatttgg tgacatcaac gttgctagca
    16861 acagagacac cgaaatttat tgcgcctgct atgaatgtgc atatgtatga aaataaacgt
    16921 acgcagcaaa atattaatat tttaaaagaa gatgggtatc attttatcga accaggaagc
    16981 ggatttctag catgtggtta tgttgctaaa ggacgtatgg aagaaccgct tcaaatcgtt
    17041 tctgttattg atgctcattt tcaaaatagt aatcgtttag ctaatagttc atttcaagat
    17101 aaacgagcat tggtcacagc tggaccaact attgaagtta tcgatccagt cagatttgta
    17161 tccaatcgtt cttctggaaa aatgggttat gcaatagctg aagcattacg aaatcgagga
    17221 gctatcgtga cgttagttgc gggtcctaca acactagagg atccaaaaga tattgaagtt
    17281 attcatgttc aaagtgctga agaaatgttt gaacaagtga caagccgatt tgaagaacaa
    17341 gatattgttg taaaagcagc agcagtatct gactatacac cggttgatgt attagaacat
    17401 aagatgaaaa agcaggatgg tgatttgtca gtatctttta aacgtactaa agatattctt
    17461 aaatatttag gtgaacataa aacatcacag tatttaatag gctttgcagc agagactgaa
    17521 gatattgaaa attatgcaca acaaaaatta cgcaagaaaa atgcagatgt gattatttca
    17581 aataatgttg gggatatgtc tatcggattt agttctgatg ataatgaatt gacaatgcat
    17641 tttaaaaata atgaaaaagt aaatatcaag aaaggaaaaa aagtagtatt agctgcacaa
    17701 attttagatg aactagaaac taggtggcaa taatgatagc gaaagtcata gtcgatgtcg
    17761 cgtcgaagag cgttgactat aaatttgatt atataattcc cgaacaactc gaatctgtca
    17821 tccaacctgg tgtgcgtgtg attgtacctt ttggaccaag aacgattcaa ggttatgtaa
    17881 tggaagtaac agcagaacct gatgcacaac ttgacgtttc gaagttaaaa aaaatcatag
    17941 aagtgaaaga tatacaacct gaattaacat cagaattaat agctttaagt gagtggatgg
    18001 gttcaactca tgtcattaaa cgtatttcta tgctagaagt gatgcttccg agtgctatta
    18061 aagcgaagta taaaaaagca tttaagatga aagatgacat agagctacct tcagctttat
    18121 tacaaaaatt tgataagcat ggttactatt attataaaga tgcgcaaaaa aataatgata
    18181 ttcaattgct tatgaagttg ttaaaagatg atatcgttga agaaaaaacg attctcacac
    18241 aaaatataac taaaaaaacc aagcgtgctg ttcgtgtcat tgaagggtat catcctgatg
    18301 aagtattagc taagttggag aaagttatta aacaatacga tttgtatgct tacttgtctg
    18361 aagaacaaca taaaacaata tttttaactg atattgagga tatgggcttt tcaaaatcca
    18421 gtttagatgg acttatcaaa aaaggttatg ttgaaaaata tgacgcggtt gttgaaagag
    18481 acccatttaa agatcgtgtt ttcgaacaag aatcaaaaca gcaattaaca gaagaccaat
    18541 ataaagcata tgaagcgatt aaagctaaaa ttgtaagcca agagcaagaa acatttttac
    18601 ttcatggtgt gacgggatca ggtaaaacag aagtatattt acaaacgata gaagatgttt
    18661 taagccaagg aaaacaggcg atgatgttag ttcctgaaat cgctctaaca ccgcaaatgg
    18721 ttttacgctt caaacgtcga tttggtgatg acgttgctgt attacattct ggcttatcta
    18781 atggggaacg ttatgatgag tggcaaaaaa ttagggatgg tcgtgcgaga gtaagtgttg
    18841 gtgcaaggtc aagtgtgttc gcacctttca aaaatttagg gttaatcatc attgatgaag
    18901 aacatgaatc tacatataag caagaagatt atccgagata tcacgcaaga gaaattgccc
    18961 aatggcgaag tgaatatcat cactgcccag tcattttagg aagtgcaaca ccatgtcttg
    19021 aaagttatgc acgagctgaa aaaggcgttt atcatttgct atcattatca aacagagtga
    19081 accaacaagc tttacctgaa attgatatag tagacatgcg tgaagaattg agtgaaggta
    19141 atcggtcaat gttttcaaaa gatttacgtg aagccataca attaagatta gatcgacagg
    19201 aacaagttgt tttattttta aatcgacgtg gttatgcatc atttatgtta tgtcgagatt
    19261 gtggatatgt accgcaatgt ccaaactgtg acatttcatt aacgtatcat aaaacgacag
    19321 acttattaaa atgtcactat tgtggttacc aagagacgcc accgaatcaa tgtccaaatt
    19381 gtgagagtga acacattcga caagtaggta caggaacaca aaaagttgaa gaactattgc
    19441 aacaagaatt tgaagatgcg cgcataatta ggatggatgt agatacaacc tcaaagaaag
    19501 gtgcacatga aaagttattg actgaattcg aaaaaggtaa cggtgacatt ttactaggta
    19561 ctcagatgat tgcgaaagga ttagattatc caaacattac tttagttggt gtgctgaatg
    19621 cagatacaat gttaaattta cctgattttc gggcgagcga acgtacttat caactattaa
    19681 cgcaagtggc tggtagagct ggtcgtcatg aaaaggcagg tcaagtcatc attcaaacgt
    19741 ataatccaga ccattattca atattggatg ttcaaaaaaa tgattattta acattttatc
    19801 gtcaggaaat ggaatatcgt aaattaggaa agtatccacc gtattattat ttgattaatt
    19861 tcacaatctc acataaagaa atgaagaagg ttatggaagc atcacagcat gttcataaaa
    19921 ttttattaca gcatttaaca gaaaaagcgc ttgtactagg tccatctccg gcagcacttg
    19981 cgagaatcaa caatgaattt agattccaaa ttttagtgaa atataaaagt gaacctggat
    20041 tattacaagc cattcaattt ttagatgact attaccatga aaaatttata aaagaaaaat
    20101 tagcattgaa gattgatatt gatccacaga tgatgatgta acattactaa ttattagaaa
    20161 caagttcagt atgtacgagt atttgaacca gtctttgaat atttacttta agggcagaaa
    20221 aagggcagaa tatacaactg ttaaccattt aaattagcag tttatattct gtctttttat
    20281 atggctttat aacttacgtg attttgattt gattagggat ttattagtat tttcatttat
    20341 gaattctgat tttaatgtaa gtaccatact tactgataaa caaaagtact aatgattaag
    20401 caaactattt tttaatggca aattgaaata gtgcaaattt tacgcttata aattaatggt
    20461 tataaactat tttatatcta tctatgtttt
//
LOCUS       DALMNS010000046        20278 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.046, whole genome shotgun sequence.
ACCESSION   DALMNS010000046 DALMNS010000000
VERSION     DALMNS010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20278)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20278)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20278
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.046"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..1038
                     /locus_tag="O6Y56_001384"
     CDS             <1..1038
                     /locus_tag="O6Y56_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDB5574639.1"
                     /translation="LSIYLYTWDRFKNKWTHFLISIPVIIGGSFSAFFITSVNSFMNT
                     PAGFELKNGKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRNRQP
                     KDTVYHKKALKMSMIVGFFSTLLSMLAGDLSAKFLHKFQPEKLAAYEWHFDTSSHAKL
                     LLFGVLDEKTQQVKGAIELPGLLSFLADNSVKTKVQGLNDFPKSLHPPMIVHYFFDLM
                     VTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLYGILLTGPASMLAIEFGWFLTEMGR
                     QPWIVRGYMRVAEAATQAGGITFVTILFGILYIILMYTCAYVLIRMFKNKPAYEDVNR
                     LAKKQGGEIEK"
     gene            1035..2054
                     /locus_tag="O6Y56_001385"
     CDS             1035..2054
                     /locus_tag="O6Y56_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDB5574640.1"
                     /translation="MIYAFIGITVLWLFLFCYIIIASIDFGAGFFALHSKLTGDEKKI
                     NHLISRYLNPVWEVTNVFFVFFFVGFVGFFPESIKYLGTVLLIPGSIALIMISLRNSF
                     YAFENYGQDTKLAWMIMYGVSGLLIPASLSTALTITEGGYINVRNNVIDLDWVQLLLS
                     PFAWSVVFLAIISVLYISSGFLTYYAKKANDEPAYNLTRQWHIFLGPPMIIICLFVFL
                     SLRIQNSEHFYSAVFDYWWMFAISFLFFTLASLLTFFKKKHGLAFVFVILQMMFAFFG
                     YGISKLPYLLYPFVKITDAYVNPEMGWTLVIVFILGLLLLLPSLILLLRLFVFDKEYV
                     EGKKS"
     gene            2187..2849
                     /locus_tag="O6Y56_001386"
     CDS             2187..2849
                     /locus_tag="O6Y56_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HDB5574641.1"
                     /translation="MGKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDI
                     ATHAVVADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQN
                     DYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELADEHSIVELKATEKMAG
                     QSIIDLDIRAQYGINIIAIKRGKEFIISPNPNINLEIGDILIMIGHDNDLNRFEKNIA
                     TR"
     gene            complement(2963..4660)
                     /locus_tag="O6Y56_001387"
     CDS             complement(2963..4660)
                     /locus_tag="O6Y56_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HDB5574642.1"
                     /translation="MKQLHPNEVGVYALGGLGEIGKNTYAVEYKDEIVIIDAGIKFPD
                     DNLLGIDYVIPDYTYLVQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALG
                     LIRNKLEEHHLLRTAKLNEINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVV
                     HTGDFKFDFTPVGKPANIAKMAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKI
                     FRNCKGRIIFATFASNIYRVQQAVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPP
                     ETFIEPNKINTVPKHELLILCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPI
                     PGNTKSINRTINSLYKAGADVIHSKISNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGE
                     YRMLKAHGETGVECGVEEDNVFIFDIGDVLALTHDSARKAGRIPSGNVLVDGSGIGDI
                     GNVVIRDRKLLSEEGLVIVVVSIDFNTNKLLSGPDIISRGFVYMRESGQLIYDAQRKI
                     KTDVISKLNQNKDIQWHQIKSSIIETLQPYLFEKTARKPMILPVIMKVNEQKESNNK"
     gene            complement(4660..4878)
                     /locus_tag="O6Y56_001388"
     CDS             complement(4660..4878)
                     /locus_tag="O6Y56_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-dependent RNA polymerase auxiliary subunit
                     epsilon family protein"
                     /protein_id="HDB5574643.1"
                     /translation="MAVFKVFYQHNRDEVIVRENTQSLYVEAQTEEQVRRYLKDRNFN
                     IEFITKLEGAHLDYEKENSEHFNVEIAK"
     gene            complement(4907..5029)
                     /locus_tag="O6Y56_001389"
     CDS             complement(4907..5029)
                     /locus_tag="O6Y56_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574644.1"
                     /translation="MNDMMNLVINQIVIKLNYRDDWIEFIDIYSNTILLGLTIN"
     gene            complement(5361..5912)
                     /locus_tag="O6Y56_001390"
     CDS             complement(5361..5912)
                     /locus_tag="O6Y56_001390"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDB5574645.1"
                     /translation="MLTMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVNS
                     QDEEIAKRYGLRSGVGLAAPQINISKRMIAVLIPDDGSGKSYDYMLVNPKIVSHSVQE
                     AYLPTGEGCLSVDDNVAGLVHRHNRITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLN
                     GVMFYDHIDKDHPLQPHTDAVEV"
     gene            6277..6903
                     /locus_tag="O6Y56_001391"
     CDS             6277..6903
                     /locus_tag="O6Y56_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkyA family protein"
                     /protein_id="HDB5574646.1"
                     /translation="MKFGKTIAVVLASSVLLAGCTTDKKEIKAYLKQVDKIKDDEEPI
                     KTVGKKIAELDEKKKKLTEDVNSKDTAVRGKAVKDLIKNADDRLKEFEKEEDAIKKSE
                     QDFKKAKSHVDNIDNDVKRKEVKQLDDVLKEKYKLHGEYSKAYKNAVNSEKTLFKYLN
                     QNDATQQGVNEKSKAIEQNYKKLKEVSEKYTKVLNKVGKEKQDVDQFK"
     gene            7074..8186
                     /gene="pdhA"
                     /locus_tag="O6Y56_001392"
     CDS             7074..8186
                     /gene="pdhA"
                     /locus_tag="O6Y56_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002467471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HDB5574647.1"
                     /translation="MAPKLQAQFDAVKVLNDTQSKFEMVQILDENGNVVNEDLVPDLT
                     DEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILP
                     GYRDVPQIIWHGLPLTEAFLFSRGHFKGNQFPEGVNALSPQIIIGAQYIQAAGVAFAL
                     KKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAA
                     ETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMA
                     GDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEA
                     DNTEKQTVTSLMEIMYEDMPQNLAEQYEIYKEKESK"
     gene            8190..9167
                     /locus_tag="O6Y56_001393"
     CDS             8190..9167
                     /locus_tag="O6Y56_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017637695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HDB5574648.1"
                     /translation="MAQMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGL
                     QKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTR
                     FRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLIS
                     SIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESM
                     KAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAE
                     LSERAILSLEAPIGRVAAADTIYPFTQAENVWLPNKNDIIEKAKETLEF"
     gene            9258..10550
                     /locus_tag="O6Y56_001394"
     CDS             9258..10550
                     /locus_tag="O6Y56_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HDB5574649.1"
                     /translation="MAFEFRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKS
                     VVEIPSPVSGTVEEVMVEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKE
                     EAPAEQAPVATQTEEVDENRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDA
                     YLNGGAPTASNESAASATNEEVAETPAAPAAVSLEGDFPETTEKIPAMRRAIAKAMVN
                     SKHTAPHVTLMDEIDVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALN
                     TSFNEEAGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDG
                     KLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVAAPV
                     LALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLMEG"
     gene            10554..11960
                     /gene="lpdA"
                     /locus_tag="O6Y56_001395"
     CDS             10554..11960
                     /gene="lpdA"
                     /locus_tag="O6Y56_001395"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009383646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HDB5574650.1"
                     /translation="MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLG
                     GVCLNVGCIPSKALLHASHRFVEAQHSENLGVIAESVSLNFQKVQEFKSSVVNKLTGG
                     VEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTYNFKNAIIATGSRPIEIPNFKFG
                     KRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQ
                     MTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRP
                     NTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLPLAHKASYEAKVAAE
                     AIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEGLAIKASKFPYAANGRALSLD
                     DTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLG
                     EMTMEAAEKAIGYPIHTM"
     gene            12129..12404
                     /locus_tag="O6Y56_001396"
     CDS             12129..12404
                     /locus_tag="O6Y56_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0223 family protein"
                     /protein_id="HDB5574651.1"
                     /translation="MEYEYPIDLDWSNEEMISVINFFNHVEKYYESGVTAGDFMDAYK
                     RFKEIVPAKAEEKQIFNTFEKSSGYNSYKAVQDVKTHSEEQRVTGKK"
     gene            12548..13087
                     /locus_tag="O6Y56_001397"
     CDS             12548..13087
                     /locus_tag="O6Y56_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDB5574652.1"
                     /translation="MNIGNKIKNLRRIKNLTQEELAERTDLSKGYISQIESEHASPSM
                     ETFLNIIEVLGTTPSEFFKDSENEKVLYKKEEQVIYDEYDEGYILNWLVSKSNEYDME
                     PLILTLKPGASYKNFNPSESDTFIYCMSGQITLNLGKEIYQAHEEDVLYFKARDNHRL
                     SNESNNETRILIVATASYL"
     gene            13100..14194
                     /locus_tag="O6Y56_001398"
     CDS             13100..14194
                     /locus_tag="O6Y56_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574653.1"
                     /translation="MEPLLSLKSVSKSYDDLNILDDIDIDIESGYFYTLLGPSGCGKT
                     TILKLIAGFEYPDSGEVIYQNKPIGNLPPNKRKVNTVFQDYALFPHLNVYDNIAFGLK
                     LKKLSKTEIEQKVTEALKLVKLSGYEKRNINEMSGGQKQRVAIARAIVNEPEILLLDE
                     SLSALDLKLRTEMQYELRELQSRLGITFIFVTHDQEEALALSDFLFVLKDGKIQQFGT
                     PTDIYDEPVNRFVADFIGESNIVEGRMVRDYVVNIYGQDFECVDMGIPENKKVEVVIR
                     PEDISLIKAEEGLFKATVDSMLFRGVHYEICCIDNKGYEWVIQTTKKAEVGSEVGLYF
                     DPEAIHIMVPGETEEEFDKRIESYEEVDNA"
     gene            14187..14984
                     /locus_tag="O6Y56_001399"
     CDS             14187..14984
                     /locus_tag="O6Y56_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5574654.1"
                     /translation="MRNTNKFLLIPYLLWMVIFIIVPVVLLIYFSFLDINGHFSFTNY
                     QQIFTTKYLKMFAYSILYAALITIITLAISYPAAYYITRSKFQNILLMIMIIPTWINL
                     LLKTYAFIGLLSHDGVINQFFHLFNLPSFNLLFTTGAFLVVASYIYIPFMILPIFNSM
                     KAIPNNLLQASSDLGASPFYTFRKVIMPLTKEGVMTGIQVTFIPSLSLFMITRLIAGN
                     KVINIGTAIEEQFLTIQNYGMGSTIAIFLIVFMAFILIITKSSNGRG"
     gene            14990..15799
                     /locus_tag="O6Y56_001400"
     CDS             14990..15799
                     /locus_tag="O6Y56_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5574655.1"
                     /translation="MKWYGKLYIGILLAILYIPIFFLMFYSFNSAGNMIHFEHFTLEH
                     YQSLFQNDHLMSVIFNTIAVALLAASISTVIGTFGAIAIYYLRNKKFKVTLLTLNNVL
                     MVSSDVVIGASFLIMFTTIGHFTGLGLGFWTVLISHIAFCIPIVVIIVLPQLYEMNNN
                     MLNAARDLGATEPQLLSNIIIPNILPSIIGGFFMALTYSLDDFTVSFFVTGNGFSVLS
                     VEVYAMARKGISMEINAISTLLFAVIVLGILGYYLIQYVINKKKLIKRGVK"
     gene            15799..16872
                     /locus_tag="O6Y56_001401"
     CDS             15799..16872
                     /locus_tag="O6Y56_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein"
                     /protein_id="HDB5574656.1"
                     /translation="MKRFLQLIIGALVVGMLCLTLSHWFKSKEQVHTNQKIYVYNWGE
                     YIDPELIKKFEKETGIQVVYETFDSNEAMEAKIRNGGTHYDVAFPSEYTVQKLKRDHL
                     LLPIDHNKVPNIKNLDSDYMNMSFDKGNKYSLPYFFGTVGILYNKEKYPNESFDSWKS
                     LYNPKFKNQILLVDGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG
                     DEITMMLEQNEGNIAVVWSGVAAPLVQEGDKYNYVIPKEGSNLWFDNMVIPKTAQNKE
                     GAYKFMNFLLDAKNNKQNTEFVGYATPNKAARQLLPKEIKDDHRFYPTKKEQERLEVY
                     KDLGPEVLSEYNENFLNFKMSLK"
     gene            16946..17965
                     /locus_tag="O6Y56_001402"
     CDS             16946..17965
                     /locus_tag="O6Y56_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HDB5574657.1"
                     /translation="MTGEQFTQIKRPVSRLTEKVLGWLCWVMLLVLTVITMFIALVSF
                     SNNTSIANLENTLNNNAFIQQLLAGNGYNTTQFVIWLQNGIWAIIVYFIVCLLISFLA
                     LISMNIRILSGFLFLISAIVTIPLVLLIVTLIIPILFFIIAMMLFIRKDKVEMVAPQY
                     YEEYNGPIYDYREPVYERPQPKDDYYDVPKYEKELDKSNTVYDQEQERDKYDQFPKRA
                     VESEYNHDERTEEEPSVLSRQAKYKQKSTEELGIEDDGYYAEPEVDPKELKAQQKREK
                     AEIKAKKKEKRKAYNQRMKERRKNQPSAVSQRRMNFEERRQIYNNDISEERNSSEVKD
                     KKEQE"
     gene            18248..18667
                     /locus_tag="O6Y56_001403"
     CDS             18248..18667
                     /locus_tag="O6Y56_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HDB5574658.1"
                     /translation="MNRKPELIMAWIANSISIIYLLVMGLSYFSLKSGNASQREELAK
                     QLSQNGGKVSLDMLQTTIGALAIILLISTLYGIFATICIKGRRKLSIILFVIAIIVSL
                     MALNLIAIVLWIIVMIMLISKKESKETTHKDDEYIYH"
     gene            complement(18749..20101)
                     /locus_tag="O6Y56_001404"
     CDS             complement(18749..20101)
                     /locus_tag="O6Y56_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001060847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HDB5574659.1"
                     /translation="MNNKRHSTNEQLSLDEINNTIKFDYRSSNKQKFLSFLGPGLLVA
                     VGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRH
                     YLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFNIPLIVGALITVLDVFLLLFI
                     MKYGFRKIEAIVGTLIFTVLFIFIFEVYISSPQLNAVLNGFIPHSEIITNNGILYIAL
                     GIIGATIMPHNLYLHSSIVQSRTYSRHNNEEKAQAIKFATIDSNIQLSIAFVVNCLLL
                     VLGASLFFNSNADDLGGFYDLYHALKTEPVLGATMGAIMSTLFAVALLASGQNSTITG
                     TLAGQIVMEGFLRLHIPNWLRRLITRSLAVIPVIVCLIIFKGNAAKIEQLLVFSQVFL
                     SIALPFCLIPLQLATSNKDLMGPFYNKTWVNIISWTLIIILSILNVYLIVQTFQELQG
                     "
BASE COUNT         7088 a         2902 c         3675 g         6613 t
ORIGIN      
        1 ttaagtatat atttatatac ttgggatcgt tttaaaaata aatggacaca tttcttaatt
       61 agtataccag taattattgg tggctctttc tcagcattct tcattacttc agtgaattca
      121 tttatgaata cgcctgcagg ttttgagttg aagaatggaa agatggtcaa tgttcaacct
      181 atagaagcga tgtttaaccc atcgtttata gttcgatcat ttcacgtaat tactacagcc
      241 ggtatgacga tggcatttgt tattgcatca atagcagctt ttaaattatt gcgtaatcgt
      301 caacctaaag atactgtcta ccataagaaa gctttgaaaa tgtctatgat tgttggattc
      361 ttttcaactt tactttctat gttagcaggg gatttatctg caaaattttt gcataaattc
      421 caacctgaaa aattagcagc ttatgaatgg catttcgata catcttccca tgccaaatta
      481 ttattatttg gtgtgttaga tgaaaagact cagcaagtta aaggtgcgat tgaattacct
      541 ggactattga gtttcttagc agataatagt gtcaaaacta aagtgcaagg gttaaatgat
      601 tttccaaaaa gtttacatcc gccaatgatc gtccattatt tctttgattt aatggtaacg
      661 atgggaattt tatgttttgt catttcaggt gtttatgtct taactttaat gtttaaaaag
      721 cttagaaagt tttctactca taaatggatg ctttacggaa tattattaac aggaccagct
      781 tcaatgctag ctatagaatt tggatggttc ttaacagaga tgggtagaca gccttggatt
      841 gttcgtggtt atatgcgcgt ggcagaagca gcaacacaag caggcggaat aaccttcgtt
      901 acaattttat ttggcatatt gtacatcatt ttaatgtata catgtgcata cgtattaatt
      961 cgtatgttta aaaataaacc ggcgtatgaa gatgtaaatc gtttagccaa gaagcaagga
     1021 ggagaaatag aaaaatgatt tatgcattta taggtataac agtgttatgg ttgtttttat
     1081 tttgctatat cattattgct tctatagatt ttggggcagg tttcttcgca ttgcattcaa
     1141 agttaactgg tgatgaaaag aaaattaatc acttaatttc acgttatttg aacccagttt
     1201 gggaagttac gaatgtattc tttgttttct tcttcgtagg attcgtaggt ttctttccag
     1261 agtcaatcaa atatttaggc acggtattgt taataccagg ttcaatagca ctgattatga
     1321 tatcgttgag aaacagtttt tatgcatttg aaaattatgg tcaagataca aaattagcat
     1381 ggatgatcat gtatggggta agtggattat taattccagc ttcattatca actgctttaa
     1441 ctattacaga aggtggttat attaatgttc gaaacaatgt tatcgatcta gattgggtgc
     1501 agttactatt aagcccattt gcttggtctg tagtattctt ggcaattatt tcagttttat
     1561 atatttcatc aggatttttg acatattatg ctaaaaaagc aaatgacgaa cctgcatata
     1621 atttaacaag acaatggcac atatttttag ggccaccgat gattatcatt tgtttattcg
     1681 tatttctatc attacgcatt caaaattctg aacattttta ttcagctgtt tttgactact
     1741 ggtggatgtt tgctataagt ttcttattct ttacattagc ttcattgtta acattcttta
     1801 agaaaaaaca tggtttggct tttgtatttg ttattttaca aatgatgttc gcgttctttg
     1861 gctatggaat tagtaaattg ccataccttt tatatccgtt tgtaaaaatt acagatgcat
     1921 atgttaatcc agaaatgggc tggacattag tgattgtctt tattttaggt ttacttttat
     1981 tacttccatc gttaatatta ttattaagat tatttgtttt cgacaaagaa tatgttgaag
     2041 gaaagaaatc ataagttgag acgatacccc aactttcatt tacttgcatt actgcattta
     2101 gataatttag ttggggtact catttataat aatttcaaat ttatattttc aatgaattga
     2161 tgaaaatcat ttaatggagg gcgagtatgg gtaaagaata tgtagtcatc ggtctaggtc
     2221 gttttggagg tagtatcgtt cgtgagttga atgcattaga catggatgta atggccatcg
     2281 accatgatga aaatagagtg aatgaatata gtgatatcgc tactcatgcg gttgttgcag
     2341 acactacaga tgaagcagtt atgaaaagtt taggtatccg taactttgat catgtcattg
     2401 tggcaattgg tgaaaatatt caatcaagta cgttgacaac tttgatttta aaagagttag
     2461 gtgtaaaaaa agtaactgct aaagcacaaa atgattatca tgcaaagatt ttaaataaaa
     2521 ttggagcaga tacggttgtg caccctgagc gtgatatggg tagacgtatt gcgcataatg
     2581 ttgcgagtgc aagtgtactt gattatcttg agttggcaga cgagcattct attgtagaat
     2641 tgaaagcaac tgaaaagatg gcggggcagt ctatcattga tttagatata agagcacaat
     2701 atggaattaa cattattgca attaaacgag gcaaagagtt catcatctca ccaaatccaa
     2761 atattaattt agaaataggt gatattttaa ttatgattgg acatgataat gatttaaatc
     2821 gctttgaaaa aaatattgcg acgagataat cgataatcat ttgtttgata tattcaaata
     2881 aatatcatat ataaagaaaa agctactaac aatgtgtggt gagtttaatt acaacttcac
     2941 ttcaaagtta gtagcttttt gattatttat tgtttgattc tttttgttcg tttaccttca
     3001 taatgactgg taaaatcatt ggttttctag ctgttttttc aaataaataa ggttgtaatg
     3061 tttcaatgat agaagattta atctgatgcc attgaatatc tttattttga tttaacttac
     3121 taataacatc agttttgatt ttgcgttgtg catcataaat taattgtcct gattctctca
     3181 tatatacaaa tcctcgagaa ataatgtctg gaccagaaag taatttattt gtattaaaat
     3241 caatactaac aacaacgata actaaacctt cttcagataa tagcttacgg tctcttatta
     3301 caacattacc gatatcaccg ataccgctac catcaacaag tacattacca gatggaatgc
     3361 gaccagcttt acgtgctgaa tcgtgtgtta aagctaagac atctccgata tcaaagatga
     3421 agacattatc ttcttcaacg ccgcattcaa caccagtctc accgtgtgct tttaacatac
     3481 ggtattcacc atgaataggt aagaaatatt tcggcttgat taatcgaagc attaattgtt
     3541 gatcaccttg agaaccatgc cctgaagtat ggatattaga aatcttgcta tggataacat
     3601 ctgcaccagc tttatacaag gaattaatag ttctgttaat actttttgta ttacctggga
     3661 taggtgatga actaaataca acggtatctt caggtataat tttaatttgc ttatgagtac
     3721 cattagcaat tctagataat gctgccattg gttcaccttg agaaccagta catagtatca
     3781 ataactcatg cttcggtacg gtattaattt tattaggttc aataaatgtt tcaggtggtg
     3841 ctttaatata accaagttcc ataccgattt taatattgtt ttccatcgaa cgaccgaacg
     3901 taacaatttt acggttattt ttgatagcag cttcaactgc ttgttgaact cggtaaatat
     3961 tagaagcgaa ggtagcaaat ataatacgac ctttacaatt acggaagatt ttatctacgt
     4021 tttgaccaac ttcacgttcg cttaaagtaa aatcaggcac aagtgaattt gttgagtctg
     4081 aaagtaaaca tagaacgcct tcttcgccta attgagccat tttagcaatg tttgctggtt
     4141 tgcctacagg tgtaaaatca aatttaaagt caccggtatg aactactttt ccttcaggtg
     4201 tatctacgat gacgccataa gtttcaggaa tactatgcgt agttaagtag aaagaaatcg
     4261 taaagtgctt agattttatc acactgtcct cattgatttc atttagttta gcagtacgta
     4321 ataaatgatg ttcttcaagt ttattacgga ttaaacctaa tgctaaagga ccaccataaa
     4381 taggtatatt aagttgtttt aataggaagg gcacaccgcc tatatggtct tcgtgaccat
     4441 gtgttataaa taggccaaca attttatctt ggttttgaac tagatatgtg tagtcaggta
     4501 taacataatc aatccctaat aagttatcat cagggaattt gatacctgca tcgataatga
     4561 caatttcgtc tttatactca actgcataag tatttttacc gatttcacct agacctccaa
     4621 gtgcatatac acctacttca tttggatgta attgtttcat tatttagcaa tctccacatt
     4681 aaagtgttct gagttttctt tttcgtaatc taaatgtgcg ccctctaatt tagtgataaa
     4741 ttcgatatta aaattacgat ctttcaagta acgacgtact tgttcttctg tttgagcttc
     4801 aacataaagt gattgtgtat tttcacgcac aattacctcg tctctgttat gttgataaaa
     4861 aactttaaat actgccatgt taaaaattcc tcctaagaat gtttgtttaa tttattgtta
     4921 accctagtaa aatcgtattg gagtatatat cgataaattc aatccaatca tctctataat
     4981 ttaacttaat aacgatttgg ttaataacta ggttcatcat gtcgttcatt ttaaaaaatt
     5041 agtgaaataa cactaaaatt tcagttaaat cttattttac atgatgaatg ataataaata
     5101 aagcagttta tctcactaga aatctaagta tttcgaataa atgtgcagtt ctatttatta
     5161 aaaataaatg tagagattat aaattaatgt taagaaagaa ttaaaggatt ttatatgaaa
     5221 cggtaaaatt taaatgaggg gataaaaagt ttggtagaaa ggtgaatata ttttactgtt
     5281 atttattagg aaaagttgta aaagaaaaag cttaggacat catatttatc ctaagctttg
     5341 ataattagta aaaatgtgtt ttaaacttct acagcatctg tatgtggttg taatgggtga
     5401 tctttgtcaa tgtgatcata gaacattaca ccatttaaat ggtcaatttc atgttggaaa
     5461 acaattgctg gatatccttt tagtcgtaac tgtatatcat taccttcgat gtctttggct
     5521 ttaattgtaa ttctattatg acggtgaact agaccagcaa cattatcatc gacgctaagg
     5581 caaccttcac cagttggtaa ataggcttct tgaacgctat gacttacaat tttggggttc
     5641 acaagcatat agtcataaga tttgccactg ccatcatctg gtattaaaac agcaatcata
     5701 cgtttagaaa tattaatttg aggtgcagcc aaaccaacgc ctgaacgtaa accgtatcgt
     5761 ttcgcgattt cctcatcttg actatttact aaaaactctc tcatggcgat taatgtttct
     5821 ttttcttctt tagttaatgg taattctaac tcagctgctt tttgacgcaa agttggatga
     5881 ccatctctaa tgatgtcttt cattgttaac atatattgca ccttccttat tttaatttgt
     5941 tttagttgaa tgacagtaaa aaggttgtta agatactcat acatttttat gtgtaaatat
     6001 gtacaaagtt aaccaactac tgccaatgtt tattttagat agtatatgta aattttcaga
     6061 tatgctaatt gcttaaaaaa tgattaaagt gttgatttta agcaatgata ctttagaaat
     6121 ttatttatca tcttgacttt aaaaattata ttataaatga cgtaactgtc aacagatata
     6181 cttagcaatg aagatgtgta atgtaattgt ttaaaattga tttccaagca gattttattt
     6241 atcatttaat ttaaatagca agtggaggta caagtaatga aatttggaaa aacaatcgca
     6301 gtagtattag catctagtgt cttgcttgca ggatgtacta cggataaaaa agaaattaag
     6361 gcatatttaa agcaagtgga taaaattaaa gacgatgaag aaccaattaa aactgttggt
     6421 aagaaaattg ctgaattaga tgagaaaaag aaaaaattaa ctgaagatgt taatagtaaa
     6481 gatacagcag ttcgcggtaa agcagtaaaa gatttaatta aaaatgccga tgatcgtcta
     6541 aaggaatttg aaaaagaaga agacgcaatt aagaagtctg aacaagactt taagaaagca
     6601 aaaagtcacg ttgataacat tgataatgat gttaaacgta aagaagtaaa acaattagat
     6661 gatgtattaa aagaaaaata caaattgcat ggtgaatact ctaaagctta taaaaatgct
     6721 gtcaattcag aaaaaacatt gtttaaatat ttaaatcaaa atgatgcgac acaacaaggt
     6781 gttaatgaaa aatcaaaagc aatagaacag aactataaaa agttaaaaga agtatctgaa
     6841 aaatatacaa aagtactaaa taaggttggt aaagaaaagc aagacgttga tcaatttaaa
     6901 taattaatat gatacagatg gtagggaaca actaatacag ttcctattat ctgtatcttt
     6961 ttttattaaa acagaacttt ttcaaatggt ttaacaggcc catttatttg tggtacaatt
     7021 agtaaggata aaatgaattt ctatacaatt atgggaaagg tatggtgaat tgaatggctc
     7081 ctaagttaca agcccaattc gatgcagtaa aagttttaaa tgatactcaa tcgaaatttg
     7141 aaatggttca aattttggat gagaatggta acgtcgtaaa tgaagactta gtacctgatc
     7201 ttacggatga acaattagta gaattaatgg aaagaatggt atggactcgt atccttgatc
     7261 aacgttctat ctcattaaac agacaaggac gtttaggttt ctatgcacca actgctggtc
     7321 aagaagcatc acaattagcg tcacaatacg ctttagaaaa agaagattac attttaccgg
     7381 gatacagaga tgttcctcaa attatttggc atggtttacc attaactgaa gctttcttat
     7441 tctcaagagg tcacttcaaa ggaaatcaat tccctgaagg cgttaatgca ttaagcccac
     7501 aaattattat cggtgcacaa tacattcaag ctgctggtgt tgcatttgca cttaaaaaac
     7561 gtggtaaaaa tgcagttgca atcacttaca ctggtgacgg tggttcttca caaggtgatt
     7621 tctacgaagg tattaacttt gcagcagctt ataaagcacc tgcaattttc gttattcaaa
     7681 acaataacta tgcaatttca acaccaagaa gcaagcaaac tgctgctgaa acattagctc
     7741 aaaaagcaat tgctgtaggt attcctggta tccaagttga tggtatggat gcgttagctg
     7801 tatatcaagc aactaaagaa gcacgtgacc gcgcagttgc aggtgaaggt ccaacattaa
     7861 ttgaaactat gacatatcgt tatggtcctc atacaatggc tggtgacgat ccaactcgtt
     7921 acagaacttc agacgaagat gctgaatggg agaaaaaaga cccattagta cgtttccgta
     7981 aattccttga aaacaaaggt ttatggaatg aagacaaaga aaatgaagtt attgaacgtg
     8041 caaaagctga tattaaagca gcaattaaag aggctgataa cactgaaaaa caaactgtta
     8101 cttctctaat ggaaattatg tatgaagata tgcctcaaaa cttagcagaa caatatgaaa
     8161 tttacaaaga gaaggagtcg aagtaagcca tggcacaaat gacaatggtt caagcgatta
     8221 atgatgcgct taaaactgaa cttaaaaatg accaagatgt tttaattttt ggtgaagacg
     8281 ttggtgttaa cggcggtgtt ttccgtgtta ctgaaggact acaaaaagaa tttggtgaag
     8341 atagagtatt cgatacacct ttagctgaat caggtattgg tggtttagca atgggtcttg
     8401 cagttgaagg attccgtccg gttatggaag tacaattctt aggtttcgta ttcgaagtat
     8461 ttgatgcgat tgctggacaa attgcacgta ctcgtttccg ttcaggcggt actaaaactg
     8521 cacctgtaac aattcgtagc ccatttggtg gtggcgtaca cacacctgaa ttgcacgcag
     8581 ataacttaga aggtatttta gctcaatctc caggtctaaa ggttgttatt ccttcaggcc
     8641 catacgatgc gaaaggttta ttaatttctt ctattagaag taatgaccca gtcgtatact
     8701 tagagcatat gaaattgtat cgttcattcc gtgaagaagt acctgaagaa gaatatacaa
     8761 ttgacattgg taaggctaat gtaaaaaaag aaggtaatga catttcaatc atcacatacg
     8821 gtgcaatggt tcaagaatca atgaaagctg cagaagaact tgaaaaagat ggttattctg
     8881 ttgaagtaat tgacttacgt actgttcaac caatcgatgt tgacacaatt gtagcttcag
     8941 ttgaaaaaac tggtcgtgca gttgtagttc aagaagcaca acgtcaagca ggtgttggtg
     9001 cagcagttgt agctgaatta agtgaacgtg caatcctttc attagaagca cctattggaa
     9061 gagttgcagc agcagataca atttatccat tcactcaagc tgaaaatgtt tggttaccaa
     9121 acaaaaatga catcatcgaa aaagcaaaag aaactttaga attttaattc attttaaaag
     9181 ttaacgaagt tagcgtattt tagtctcatt gattaaaatg aaatgtttaa tttacgaaat
     9241 cttaggaggg caaaaacgtg gcatttgaat ttagattacc cgatatcggg gaaggtatcc
     9301 acgaaggtga aattgtaaaa tggtttgtta aagctggaga tactattgaa gaagacgatg
     9361 ttttagctga ggtacaaaac gataaatcag tagtagaaat cccatcacca gtatctggta
     9421 ctgtagaaga agttatggta gaagaaggta cagtagctgt agttggtgac gttattgtta
     9481 aaatcgatgc acctgatgca gaagatatgc aatttaaagg tcatgatgat gattcatcat
     9541 ctaaagaaga acctgcgaaa gaggaagcgc cagcagagca agcacctgta gctactcaaa
     9601 ctgaagaagt agatgaaaac agaactgtta aagcaatgcc ttcagtacgt aaatacgcac
     9661 gtgaaaaagg tgttaacatt aaagcagttt ctggatctgg taaaaatggt cgtattacaa
     9721 aagaagatgt agatgcatac ttaaatggtg gtgcaccaac agcttcaaat gaatcagctg
     9781 cttcagctac aaatgaagaa gttgctgaaa ctcctgcagc acctgcagca gtatcattag
     9841 aaggcgactt cccagaaaca actgaaaaaa tccctgctat gcgaagagca attgcgaaag
     9901 caatggttaa ctctaagcat actgcacctc atgtaacatt aatggatgaa attgatgttc
     9961 aagcattatg ggatcaccgt aagaaattta aagaaatcgc agctgaacaa ggtactaagt
    10021 taacattctt accatatgtt gttaaagcac ttgtttctgc attgaaaaaa tacccagcac
    10081 ttaatacttc attcaatgaa gaagctggtg aaattgtgca taaacattac tggaatatcg
    10141 gtattgcggc ggacactgat agaggtttat tagtacctgt agtgaaacat gctgaccgta
    10201 aatctatttt ccaaatttct gatgaaatta acgaattagc tgttaaagca cgtgatggta
    10261 aattaacagc cgatgaaatg aaaggtgcaa catgcacaat cagtaatatc ggttcagctg
    10321 gtggacaatg gttcactcca gttatcaatc acccagaagt agcaatctta ggaattggcc
    10381 gtattgctca aaaacctatc gttaaagatg gagaaattgt tgcagcacca gtattagcat
    10441 tatcattaag ctttgaccac agacaaattg atggtgcaac tggccaaaat gcaatgaatc
    10501 acattaaacg tttattaaat aatccagaat tattattaat ggaggggtaa aacatggtag
    10561 ttggagattt cccaattgaa acagatacta tagtaatcgg agcaggtcct ggtggatacg
    10621 ttgcagcaat tcgtgcagct caattaggac aaaaagtaac aatcgttgag aaaggtaatc
    10681 ttggtggtgt ttgcttaaac gtaggatgta ttccttcaaa agcattacta catgcttctc
    10741 accgttttgt agaagcacaa cattctgaaa acttaggtgt tattgctgaa agtgtttctt
    10801 taaacttcca aaaagttcaa gaattcaaat catcagttgt taataaatta actggtggtg
    10861 ttgaaggctt acttaaaggt aacaaagtta acatcgttaa aggtgaagca tatttcgtag
    10921 ataacaatag cttacgtgtt atggacgaaa agagcgcaca aacatacaac tttaaaaatg
    10981 caatcattgc aacaggttca agaccaattg aaattcctaa tttcaaattc ggtaaacgtg
    11041 ttatcgactc aacaggtgct ttaaacttac aagaagtacc aggtaaatta gttgtagttg
    11101 gtggaggata cattggatca gaattaggta cagcatttgc taactttggt tcagaagtaa
    11161 caatccttga aggtgctaaa gatatcttag gtggcttcga aaaacaaatg acacaacctg
    11221 ttaaaaaagg tatgaaagaa aaaggtgttg aaatcgttac tgaagctatg gctaaatcag
    11281 ctgaagaaac agataacgga gttaaagtta cttatgaagc taaaggcgaa gagaaaacaa
    11341 tcgaagctga ttatgtatta gtaactgtag gtcgtcgtcc aaacacagac gaattaggcc
    11401 tagaagaatt aggtgttaaa ttcgctgacc gtggattatt agaagttgat aaacaaagcc
    11461 gtacgtctat cagcaatatc tatgcaattg gtgatatcgt tccaggttta ccacttgcgc
    11521 acaaagctag ctatgaagct aaagttgctg ctgaagcaat tgatggtcaa gctgctgaag
    11581 ttgattacat tggtatgcca gcagtatgct ttactgaacc agaattagct acagttggtt
    11641 attcagaagc gcaagctaaa gaagaaggtt tagcaattaa agcttctaaa ttcccatatg
    11701 cagcaaatgg tcgtgcatta tcattagatg atactaacgg atttgttaaa cttattacac
    11761 ttaaagaaga tgatacttta atcggtgccc aagtagttgg tactggtgca tcagatatta
    11821 tctctgaatt aggtttagca attgaagctg gtatgaatgc tgaagatatc gcattaacaa
    11881 tccatgcaca tccaacatta ggtgagatga ctatggaagc agcggaaaaa gctatcggat
    11941 acccaatcca tacaatgtaa taactgatta tctataaaga ttcagtcttt aaaagctgta
    12001 gcatatgcta cggctttttt tgttttaggt aaagtagtgt aaggaaattg atttgagata
    12061 tcgttaacat gtgacatgca tgttatacta gcgatgctaa caaaagaatt gaaatggagg
    12121 gttcaacaat ggaatatgag tatccaattg acttagactg gagtaatgaa gagatgattt
    12181 cagtgataaa tttctttaat catgtagaga agtattatga atccggcgtg acggcaggcg
    12241 actttatgga tgcatataaa agatttaaag aaattgtgcc tgctaaagca gaggaaaaac
    12301 aaatttttaa tactttcgaa aaaagtagtg gctataatag ttacaaagca gttcaagatg
    12361 taaaaactca ctctgaagaa caaagagtaa caggtaaaaa ataattcgtt cgaaattaac
    12421 acaatttaat aggatttttt ctttaaaact attgctaata aagctatatt ttgatacctt
    12481 tatcaagtgt taaacaaaat gtttgataaa agtaaactta atatagcttt tttaggtgga
    12541 aaaataaatg aacataggta ataaaattaa aaatcttaga agaattaaaa atttaacgca
    12601 agaagaactt gctgaacgta cagacttatc aaaaggctac atttcacaaa tagaaagtga
    12661 acatgcctca ccaagtatgg aaactttctt aaatattata gaggtgttag gaacgacgcc
    12721 aagtgaattt tttaaagaca gtgaaaatga aaaagtatta tacaagaagg aagaacaagt
    12781 tatttatgat gagtatgatg aaggttatat attaaattgg ttagtttcaa agtcaaatga
    12841 atatgatatg gagccattaa tattaacttt aaagcctggc gcatcatata aaaattttaa
    12901 tccatcagag tctgatacgt ttatttattg tatgtcaggt cagataacac ttaatttagg
    12961 caaagagata tatcaagcac atgaagaaga cgttttgtat tttaaagcac gagataatca
    13021 tcgtttgtca aatgaatcaa acaatgaaac acgaatactt attgtagcga cagcttcata
    13081 tttatagggg ggatcttatt tggaaccatt attatcatta aaatcagtta gtaaaagcta
    13141 tgatgatctt aatatcttag atgacataga tattgatatt gaatcaggat acttttatac
    13201 attattaggt ccttcaggtt gtggtaaaac aacaatttta aaattaattg cagggtttga
    13261 atatcctgac agtggtgaag tgatttatca aaacaaacca attggtaatt taccaccaaa
    13321 taaacgtaaa gtgaatacag tctttcaaga ttatgcatta tttccacact taaacgtata
    13381 tgataatatc gctttcggtt tgaaattaaa aaaattatca aaaaccgaaa ttgagcaaaa
    13441 agtaactgag gcattaaaat tagttaagct ttcaggttat gaaaaaagga atattaatga
    13501 aatgagtggt ggacaaaagc aacgtgttgc aattgcacgt gctatcgtaa atgaaccaga
    13561 aatattattg ttagatgaat ctttatccgc attagatttg aaattgcgta ctgaaatgca
    13621 atatgaatta cgagaattgc aatctagatt aggtattaca tttatatttg taacacatga
    13681 tcaagaagaa gcgttagcac taagtgactt tctttttgta ttaaaagatg ggaaaattca
    13741 acaatttggt acaccaacag atatatatga cgaaccagtg aatcgatttg tagctgattt
    13801 tattggagaa tctaatattg ttgaagggcg catggttaga gattatgtcg tgaatattta
    13861 tgggcaagat ttcgaatgtg tcgatatggg tattcctgaa aataaaaaag tagaggtcgt
    13921 tattcgacca gaagatatat cattaatcaa agctgaagaa ggattattta aagcaactgt
    13981 tgattctatg ttatttagag gagtccacta tgaaatatgt tgtatagaca ataaaggtta
    14041 tgaatgggta atacaaacaa ctaaaaaagc tgaagtaggc agtgaagttg gtctttattt
    14101 tgatcctgaa gccattcata ttatggttcc tggagaaaca gaagaagagt ttgataaacg
    14161 tattgaaagc tatgaggaag tagacaatgc gtaatactaa taaatttctc ttaatcccgt
    14221 atttattatg gatggttata tttattattg taccagttgt attactcatt tatttttcat
    14281 ttttagatat caatggacat tttagtttca cgaattatca acaaattttt actacaaaat
    14341 atttaaaaat gtttgcatat tcaattttat atgccgcttt aataacaatt attacgttgg
    14401 ctatcagtta tccggctgcc tattatatta ctcgctcgaa atttcaaaat atcttattaa
    14461 tgataatgat tattccaaca tggataaatt tattgttaaa gacatatgct tttataggtt
    14521 tattaagtca cgatggcgtg attaatcaat ttttccactt atttaattta ccatcattta
    14581 atttgttatt tacaactggt gcgtttttag tagtggcaag ttatatttat ataccattta
    14641 tgattttacc tatatttaat agcatgaaag caattcctaa taatttattg caggcctcaa
    14701 gtgatttagg tgctagtcct ttctatactt ttagaaaagt aatcatgccg ttaacaaaag
    14761 aaggtgttat gactgggatt caagtaacct ttattccatc actttcatta tttatgatta
    14821 caagattaat tgcaggtaat aaagtcataa atataggtac ggcaatagag gaacaatttt
    14881 taacaattca aaattatggt atgggatcaa ctatagctat attcttaatt gtatttatgg
    14941 cattcatttt aatcattaca aaatcatcta atgggagagg gtgaatcata tgaaatggta
    15001 tggaaagctg tatatcggga tacttttagc gattttatac atcccaatat tctttttaat
    15061 gttctattca ttcaattcgg ctggtaatat gattcacttt gaacatttta cattagagca
    15121 ttatcaatca ttatttcaaa atgatcattt aatgtcggtc atttttaata cgatagctgt
    15181 agcactttta gcagcctcaa tttctacagt tattggtaca tttggtgcca ttgctattta
    15241 ttatttaaga aataaaaagt ttaaagtaac tttactaaca ttgaataatg tcttgatggt
    15301 atcatccgat gttgtcatag gtgcatcatt cttaattatg tttacaacga ttggccattt
    15361 tactggtctt ggtttaggat tttggacagt tctaatatct catattgcat tttgcatacc
    15421 tatagttgtg attatcgtct taccacaact gtatgaaatg aataataata tgttaaatgc
    15481 tgcaagagat ttaggagcga ctgaaccaca attattaagc aacattatta ttcctaatat
    15541 tttaccttct attataggag gattctttat ggctttaact tattcactag acgatttcac
    15601 agtaagtttc ttcgttactg gtaatggctt tagtgtgtta tcagttgaag tttatgctat
    15661 ggcgagaaaa ggaattagta tggaaattaa tgcgatttca acattattgt ttgctgttat
    15721 tgtattagga atactaggat attatttgat tcaatacgtg ataaataaga aaaaactaat
    15781 caagcgaggt gtaaaataat gaaacgtttt ttacaactca ttataggtgc attagttgtg
    15841 ggtatgcttt gtcttacttt aagtcattgg tttaaatcta aagaacaagt gcatacaaat
    15901 caaaaaattt acgtatacaa ttggggagaa tatattgatc cagagttaat taagaaattt
    15961 gaaaaagaaa ctggcattca agtcgtttat gaaactttcg attcaaatga agcgatggaa
    16021 gccaaaattc gcaatggcgg tacacattat gatgttgctt ttcctagtga atatacagtt
    16081 caaaaattga aaagagatca tttattgtta ccaatagatc ataataaggt acctaatatt
    16141 aaaaatttgg attcagatta tatgaatatg tcatttgata aaggcaataa atactcttta
    16201 ccttatttct ttggaactgt aggtatttta tataataaag aaaagtatcc aaatgaatca
    16261 tttgatagtt ggaagtcgtt gtataatcct aaatttaaaa accaaatttt actagttgac
    16321 ggtgctagag agattatagg catgagtctc aacaaacttg ggtataatct taatgaccgt
    16381 aattcgcacc atctaaaaga agcagagcga gatttaacta aattagcacc acaggtaaga
    16441 ggtgtcgtag gtgatgaaat taccatgatg cttgaacaaa atgaaggtaa cattgcggtt
    16501 gtttggagtg gtgttgcagc acctctagtg caagaagggg ataaatataa ctatgttatt
    16561 cctaaagaag gatcgaattt atggttcgac aatatggtaa ttccaaaaac ggcacaaaat
    16621 aaagagggtg catataaatt tatgaatttt ttattagatg ctaaaaataa caagcaaaat
    16681 acagaattcg taggctatgc aacgccgaac aaggctgcac gacaattgtt gcctaaagag
    16741 attaaagatg accatcgttt ctatccgact aagaaagagc aagaacgcct tgaagtttat
    16801 aaagatttag gacctgaagt tttaagtgaa tacaatgaaa actttttgaa tttcaaaatg
    16861 tcattaaaat aaaatcataa atagtagtta tttactgtat atttagttat aataacggga
    16921 taagtacaat aaggagttgt aacgaatgac tggagaacaa tttactcaaa ttaaacgtcc
    16981 agtaagtaga ttaactgaaa aagttctagg ttggttatgt tgggtgatgt tattagtgct
    17041 tactgtcatt acgatgttta tagcacttgt ttcattcagt aataacacat cgattgctaa
    17101 tcttgaaaat acattaaaca ataatgcatt tatccagcaa ttattagctg gaaatggcta
    17161 taatacaaca caatttgtaa tatggttaca aaatggtata tgggctatta tcgtttactt
    17221 tattgtttgt ttgttgattt catttttagc tctcatatct atgaatataa gaatcttgtc
    17281 aggtttctta ttcttaatat cagcaattgt aacgattcct ttagttttac ttatcgttac
    17341 tttaatcatt ccgatattat tctttattat tgcgatgatg ctatttataa gaaaagataa
    17401 agttgaaatg gttgcgccac aatattatga agagtacaat ggaccgattt atgattatcg
    17461 tgaacctgtg tatgagcgcc cacaaccgaa agatgattat tatgatgtgc ctaaatatga
    17521 aaaagaattg gataaatcaa acactgtata tgatcaagaa caggaaagag ataaatatga
    17581 tcaatttcct aaacgtgcag ttgaaagtga atataatcat gatgagcgca ctgaggaaga
    17641 accatcagta ttatccagac aggctaaata caaacaaaaa agtactgaag aactaggtat
    17701 tgaagatgat ggttattatg cagaacctga agttgatcca aaagaattga aagcacaaca
    17761 aaagcgagaa aaagctgaaa ttaaagctaa gaaaaaagaa aaacgtaaag cttataacca
    17821 acgaatgaaa gaacgtagga aaaatcaacc tagcgcagtt agtcaacgtc gaatgaattt
    17881 tgaagagcga cgtcaaattt acaacaatga tatttctgaa gaacgcaatt caagtgaagt
    17941 taaggacaaa aaagagcaag aataaatatt gatgataccc agattagtaa gtagaggtct
    18001 tttgcttatt aatctgggtt tttatatgag gttaatcatc gataacgttt aattaaagtg
    18061 tttaggtgtc aaaattttaa atgacgattt ctcattacca tacacctaaa ttaccatcaa
    18121 tctgaattca gatgcttatt ataaaaatta gatgaaaaat atgttaatat acaagtaaat
    18181 taatgtgcgt atatctatag gctcgtagta tacttattaa aatattaaac aaagaaagga
    18241 ttttaagatg aatagaaaac ctgaattaat catggcttgg attgcaaata gtattagtat
    18301 tatttattta ttagttatgg ggctatccta tttttcttta aaaagtggta atgcatcaca
    18361 acgtgaagaa ttagcgaagc aattatctca gaacggtggc aaggtttctt tagatatgct
    18421 tcagacaaca attggtgcat tagcaattat tttattaatt tcaacacttt atggtatatt
    18481 tgcgacaatt tgtattaaag ggcgtagaaa attatcgatt atactttttg ttatcgcgat
    18541 aattgtaagt ttgatggctc ttaatttaat tgcaattgtc ttatggatta tcgtgatgat
    18601 tatgttgatt tctaaaaaag aatcaaaaga aactacacat aaggacgatg agtatattta
    18661 tcattaatat gttcatagca aaagaaaaac cattaaaatg ttaagttgtt aattattaga
    18721 tacaaccaac attttaatgg ttttattttt aaccttgtag ttcttggaat gtttgaacga
    18781 ttaaatagac atttaaaata cttagaataa taataagtgt ccatgaaatg atattaaccc
    18841 atgttttatt atagaaaggt cccatcaagt ctttattact agttgctaat tgtaatggta
    18901 ttaaacagaa cggcagagca atacttaaga atacttgaga gaatacaagt agctgctcaa
    18961 ttttagctgc attaccttta aaaatgatta aacatacgat aacaggaatg acagcaaggg
    19021 aacgtgtaat taaacgtctt aaccaatttg gtatgtgtaa tcttaaaaat ccttccatta
    19081 cgatttgtcc tgctaaagta ccagtaatcg ttgaattttg acctgacgct aataatgcaa
    19141 ctgcaaataa tgtactcatg attgcaccca ttgttgcacc cagtacaggt tcagttttta
    19201 aggcatgata taaatcatag aaaccaccta aatcgtcagc gtttgagttg aaaaatagtg
    19261 atgctcctaa tactaataat aagcaattga ctacaaatgc gattgataac tgaatgttcg
    19321 aatctatcgt agcaaattta atcgcttgcg ccttttcttc attgttatgt cttgagtatg
    19381 ttctagattg tacaattgat gaatgtaagt acaaattatg aggcataatt gtagctccaa
    19441 taatacctaa tgcaatatag agaatgccgt tatttgtaat gatttcacta tgtggtataa
    19501 atccatttaa cacagcgttc aactgtggtg atgaaatata gacttcaaat ataaagatga
    19561 ataacactgt gaaaattaat gtaccaacaa tagcttcaat ttttctaaaa ccatatttca
    19621 ttataaatag tagtaaaaat acatcaagta cagttattag tgcaccgacg attaaaggta
    19681 tgttaaatag gagattgaga gcaatagcac taccaataac ctcagcaata tctgtggcga
    19741 taattgctag ttctgcaata atccaaaaga ttatagcaat aggtcttgat aaataatgtc
    19801 gtgtcatttg agctaagtcc atacctgttg ctattcctaa tctcactgtc atgctttgaa
    19861 gtaacattgc tgataaactt gaaataagaa ttacgaatag caaagtatag ccatattgcg
    19921 cgccaccttg cattgatgtt atccagtttc cgggatccat gtaaccaaca gcgactaata
    19981 acccaggccc aagaaatgat aaaaatttct gtttatttga actgcgataa tcgaatttaa
    20041 ttgtattgtt tatttcgtct aaacttaatt gttcatttgt tgaatgtcgt ttattattca
    20101 ttttgactca cctctacttc ttatggacaa tataataacc taataaaatg tttaggtcaa
    20161 cctaaattta ttttaatttt tttaaaagta tgaattatta tgttgaacgt tcgatttaaa
    20221 ggtaagcgaa aagagcacga aatcagtgat gtgattacgt gctctattat tatgaaaa
//
LOCUS       DALMNS010000047        20199 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.047, whole genome shotgun sequence.
ACCESSION   DALMNS010000047 DALMNS010000000
VERSION     DALMNS010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20199)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20199)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20199
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.047"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(49..999)
                     /locus_tag="O6Y56_001405"
     CDS             complement(49..999)
                     /locus_tag="O6Y56_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDB5574660.1"
                     /translation="MKVVGLNRMREVETELQQRFSDVDFKFYKKASEIPESDLADLDI
                     LVGYDGGINEAFLRRCPNLKWIAWFATGVNTLPLDYIADHGILLTNGKGVQAKQLSEY
                     ILAFILDDYKKMKLSYDNQRQHIYDSKITGKRLSGQTVLFLGTGAIATRTAKLAKAFN
                     MNLIGLSKSGQNKHEFDEIYTIESLESTLPNADIVINALPETQETIHLLKKNHFELMK
                     DEALFINIGRGSIVKEALLIEVLKSRVIRHAYLDVFENEPLKPNHELYELDNVTITAH
                     ITGNDYEAKYDLLDIFKNNLVNFLNKNGLIENEVDAKKGY"
     gene            complement(1005..1460)
                     /locus_tag="O6Y56_001406"
     CDS             complement(1005..1460)
                     /locus_tag="O6Y56_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HDB5574661.1"
                     /translation="MLQKGEQFPIFKLENQDGTVITNDTLKGKKAIIYFYPRDNTPTC
                     TTEACDFRDNLEMFNDLDVAVYGISGDSKKKHQNFIEKHGLNFDLLVDEDFKLAKETS
                     VYQLKKSFGKESMGIVRTTFIIDEQGKVLDVIEKVKVKTQIEELKNILG"
     gene            1541..2830
                     /locus_tag="O6Y56_001407"
     CDS             1541..2830
                     /locus_tag="O6Y56_001407"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500497.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDB5574662.1"
                     /translation="MNFSESERLQQLSNEYILGGVNSPSRSYKAVGGGAPVVMKEGHG
                     AYLYDVDGNRFIDYLQAYGPIITGHAHPHITKAIQEQAAKGVLFGTPTELEIEFSKKL
                     RDAIPSLEKIRFVNSGTEAVMTTIRVARAYTKRNKIIKFAGSYHGHSDLVLVAAGSGP
                     SQLGSPDSAGVPESVAREVITVPFNDINAYKEAIEFWGDEIAAVLVEPIVGNFGMVMP
                     QPGFLEEVNEISHNNGTLVIYDEVITAFRFHYGAAQDLLGVIPDLTAFGKIVGGGLPI
                     GGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQL
                     EEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQG
                     INLAPSKFEAWFLTTEHTEEDIKQTLKAADYAFSQMK"
     gene            3123..4217
                     /locus_tag="O6Y56_001408"
     CDS             3123..4217
                     /locus_tag="O6Y56_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HDB5574663.1"
                     /translation="MRLGARIFKTGIAIILAMSIASLLPDDVGLKALAGVSAVVAMQP
                     SIYRSFKTVSDQALGNIIGAILSVTMVTIFSDNFIIMGVTVIVLIAILFKFNLAHVAT
                     LASVTALIIMGQHTGSFYITAFYRFVLVMIGVISSSLVNFVFLPPKFETKIYYNSLNI
                     SSDIFMWFKLVLNDTTEFNNIKQDSHNLKQRVEKLEKIYDYYSEERPITKKHIHQQNR
                     KKILFREVVQTTRQAYEVLNKLSRYQNDLYLLNNNFLLQIKLDLDSLTAFHEQILASL
                     SKKARYNVTHVDYELDNPQKKDLLSTFQHELINHPYQTEYSFANVMQIVAAIEEYRHH
                     LEHLDRIRISFFTYHRSDADIEIVEEDFDL"
     gene            complement(4408..6144)
                     /locus_tag="O6Y56_001409"
     CDS             complement(4408..6144)
                     /locus_tag="O6Y56_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAV1866 family putative multidrug efflux ABC
                     transporter"
                     /protein_id="HDB5574664.1"
                     /translation="MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGV
                     INNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYN
                     HLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD
                     VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAI
                     EDNEAKNFDKKNANFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSIT
                     VGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIE
                     IKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYD
                     VTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEA
                     AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSAL
                     DLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQ
                     GAYEHLYSIQNL"
     gene            complement(6435..6977)
                     /locus_tag="O6Y56_001410"
     CDS             complement(6435..6977)
                     /locus_tag="O6Y56_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF402 domain-containing protein"
                     /protein_id="HDB5574665.1"
                     /translation="MVRESIPKEGENIKIQSYKHDGKIHRVWSETTILKGTDHVVIGG
                     NDHTLVTESDGRTWITREPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEAL
                     KYIDYDLDIKVYPNGKYHLLDEDEYEQHMNQMNYPHDIDIILRRNVDILQQWIEQKKG
                     PFAPDFIKVWKERYKKIRQY"
     gene            complement(7280..8317)
                     /gene="mutY"
                     /locus_tag="O6Y56_001411"
     CDS             complement(7280..8317)
                     /gene="mutY"
                     /locus_tag="O6Y56_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDB5574666.1"
                     /translation="MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQ
                     VKTVIDYYHRFVERFPTVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVHDKYEG
                     LVPKDPDQFKALKGVGPYTQAAVMSIAYNVPLATVDGNVFRVWSRLNDDYRDIKLQST
                     RKSYEQELLPYVTTESGTFNQAMMELGALICTPKNPLCLFCPVQENCEAFDKGTFEKL
                     PVKSKNVSKKVIEQSVFLIRNNQGQYLLQKRSEKLLHGMWQFPMFESEHARREMTEKI
                     GHDIQPVETPIFELKHQFTHLTWKIKVYAVSGTINIETLPDDMIWFDLSDRDQYTFPV
                     PMSKIYQFING"
     gene            8469..9446
                     /locus_tag="O6Y56_001412"
     CDS             8469..9446
                     /locus_tag="O6Y56_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDB5574667.1"
                     /translation="MDTATHIAIGVGLTALATQDPAMASTFGATATTLIVGSLIPDGD
                     TVLKLKDNATYISHHRGITHSIPFTILWPILITFLIFTFFSGTNPFHVWMWAQLAVFL
                     HVFVDIFNSYGTQALRPITNKWIQLSVINTFDPIIFTVLCIGIVLWVIGLHPFAVFFP
                     IIALLIIYYMIRFKMRAVIKQQALKAIQQEHHPVKVFVAPTIKFMEWRVAIQTDAHDY
                     VGKAYGRNVVFSDKVERQTLSTDSILWKVKGNKDIRTFLNFSSIYRWQTTTLADGSTE
                     IRLIDLRYLKNDHYSFVAIAHVTNDNVIDHSYIGWVFTEDKLQRKLYAK"
     gene            complement(9707..10543)
                     /locus_tag="O6Y56_001413"
     CDS             complement(9707..10543)
                     /locus_tag="O6Y56_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574668.1"
                     /translation="MLDNIILYFKNLPHTKRYVTERFKQSWKSFLIVLAACLILIIAS
                     ETLFSFSHLTDVKEVRWLFRIIALIVFAVLMFTIYISYHHYMNDFLVTKLFNISAATP
                     VVIMSILSFIMLVILTMISALVKPVNFETSYIALFYFIVMATIFVGLISVTFGLIRLL
                     TEKINIIFYGICVLCFLLLPIIFIPNPNHVFINHILMLNPMYYIVNGIAQSIIFGISS
                     MENIPYHFYFILFLCLIAAVNFVLARYTTHAIYNKTSKVTQTDNQQDVSNDSTDEADT
                     SS"
     gene            complement(10552..12069)
                     /locus_tag="O6Y56_001414"
     CDS             complement(10552..12069)
                     /locus_tag="O6Y56_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574669.1"
                     /translation="MGSSIVLKLLKVTHYYRNKQNKKWYLPFGYDAEDIDLNNISLHI
                     YQGEALGIIGEPESSKALVGQLLAGAIKPDKGKVVCTEDLFYGYIEDQSSIHQTVEAY
                     TAQLVQLFPYEINDHKAEQIIQYAHLGDYKTKPVNHISKAAYAQLLLSIARSSKSNII
                     ILNHVIDYLTPQFIERAIELTNDYIENNLTIVSIGDDIDKISQVSNYIAWFSHGQLRM
                     EGSLKQVIPSFKEHERDRLSLNSKEEIENFDLDWKKNRTRIPEMTYNFKRVERYNHAK
                     PPKFLVRFWTLASGTILGLALMMLLIFNNIGIISITDFTNRATMQNENKDPYGEKLAY
                     GIAFNGSVDMQGDKQVTIPKYSVVTITGENSKNYRVTADNKTYYVSKDKLEYFNPAGL
                     YQTHSFKKLAPYMKSNYSNYYAYFNSQLHKKHSSVIKTLVPDDDNRFVASVTQQPIQL
                     LFNDNNQLYGFVYPIVDKKELKDKFNINNNIWITKVGNGYCIANLKEDKWIYIEL"
     gene            complement(12084..12398)
                     /locus_tag="O6Y56_001415"
     CDS             complement(12084..12398)
                     /locus_tag="O6Y56_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000435810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhH family protein"
                     /protein_id="HDB5574670.1"
                     /translation="MEQKKLSEMSEPELRHEIQLYKEKMRKAEMNGILNEYDVYQSKV
                     IVAESYLVDRKKIEIGKIYKLTDGSNQYFKVERLKGIFAWGFRFNSDEPEEGLPIALL
                     QL"
     gene            complement(12376..13194)
                     /gene="recX"
                     /locus_tag="O6Y56_001416"
     CDS             complement(12376..13194)
                     /gene="recX"
                     /locus_tag="O6Y56_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HDB5574671.1"
                     /translation="MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQ
                     LEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEVILYLQKEEISEQAISEVIEYCY
                     REKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
                     IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQ
                     RDLEKIYNKNRKKYTQQKLISKTIEGLMRKGYKYDKIKAKLEESGIADGTEEIE"
     gene            complement(13455..14264)
                     /gene="sgtB"
                     /locus_tag="O6Y56_001417"
     CDS             complement(13455..14264)
                     /gene="sgtB"
                     /locus_tag="O6Y56_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional peptidoglycan glycosyltransferase
                     SgtB"
                     /protein_id="HDB5574672.1"
                     /translation="MKRSDRYSNSNEHFEHMKHEPHYNTYYQPVGKPPKKKKSKRILL
                     KILLTILIIIALFIGIMYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDE
                     RFYNHHGFDLKGTTRALFSTISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVA
                     HRVEKQYNKNEILSFYLNNIYFGDNQYTLEGAANHYFGTTVNKNSTTMSHITVLQSAI
                     LASKVNAPSVYNINNMSENFTQRVSTNLEKMKQQNYINEAQYQQAMSQLNR"
     gene            complement(14604..15119)
                     /locus_tag="O6Y56_001418"
     CDS             complement(14604..15119)
                     /locus_tag="O6Y56_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HDB5574673.1"
                     /translation="MTKKVAIILANEFEDIEYSSPKEALENAGFNTVVIGDTANSEVV
                     GKHGEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTF
                     AICHGPQILIDTNDLKGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLD
                     DFNREIVKQLQ"
     gene            complement(15249..15410)
                     /locus_tag="O6Y56_001419"
     CDS             complement(15249..15410)
                     /locus_tag="O6Y56_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574674.1"
                     /translation="MNEQQTIEQIKARLNKFIEDIDHVNPDEVRVEDIDEWIGLLDQL
                     EEKVKLVSK"
     gene            15634..16785
                     /gene="yfkAB"
                     /locus_tag="O6Y56_001420"
     CDS             15634..16785
                     /gene="yfkAB"
                     /locus_tag="O6Y56_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001089599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM/CxCxxxxC motif protein YfkAB"
                     /protein_id="HDB5574675.1"
                     /translation="MNSVKLKQPVSIHNDPWEAYNDVKEHGQLTLSNIEFTTTNLCNM
                     RCSHCAVGYTLQTVDPEPLDMDLIYRRLDEIPNLRTMSITGGEPMFSKKSIRNVVKPL
                     LKYAHNRGIYTQMNSNLTLPQDRYLDIAEYIDVMHISHNWGTTDEFANVGFGAMKKQP
                     PLKAKLKLYEQMISNARTLSEQGMFVSAETMLNQSTLPHLRKIHQEVVHDMKCSRHEI
                     HPMYPADFASQLNVLTLAEIKKTIHDILDFRDENIWMLFGTLPVFPCLKDDEDQKLLS
                     RLRTAKNVTTRNDPDGRSRLNVNVFTGNVIVTDFGDETGTISNIQKDKLTDVFDKWLS
                     SDLAKSLNCHCSEFSCLGPNVLVKNMYYPNMDFKDNELHMHKQPQIIQF"
     gene            complement(17045..17575)
                     /locus_tag="O6Y56_001421"
     CDS             complement(17045..17575)
                     /locus_tag="O6Y56_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDB5574676.1"
                     /translation="MTNQDRPMKSMSESKCYKNRQVFPQDTNHHHTMFGGTLMANIDE
                     IAAITAMKHAGAQVVTASTDSVDFLKPIKTGDILQYVAMVSYAGTSSMEVVVQIRIDD
                     VFNNKHDLAALSYLTFVALDDDGKPKHVPGVYPEDDVEKWFYDTAPQRVERRKARRIE
                     SKQTIEYLAQVQHIRD"
     gene            complement(17665..18921)
                     /locus_tag="O6Y56_001422"
     CDS             complement(17665..18921)
                     /locus_tag="O6Y56_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HDB5574677.1"
                     /translation="MGILTNYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTH
                     LIVEEAYHCGASDVRVVYSDPTLKRLKFENESVEHFANHEIKSYDVEARMDYVKRGAA
                     NLALISEDPDLMDGIDSQKLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKR
                     VYPELSVEEAYIKFIDEVFDIVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYV
                     SEGTDLTVGLAKNHIWEDATSYVNGKEQAFIANIPTEEVFTAPDRNRVDGYVTNKLPL
                     SYNGTIIDQFKLMFKDGEIIDFSAEKGEAVLKDLINTDEGSRRLGEVALVPDDSPISN
                     RNTIFYNTLFDENAACHLAIGSAYAFNIEGGTEMTVEEKIASGLNDSNVHVDFMIGSS
                     DLTIYGIFEDGSKELVFENGNWASTF"
     gene            complement(18924..19124)
                     /locus_tag="O6Y56_001423"
     CDS             complement(18924..19124)
                     /locus_tag="O6Y56_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1128 family protein"
                     /protein_id="HDB5574678.1"
                     /translation="MTNEEKVLAIREKLNIVNQGLLDPEKYKNANEEELTDIYDFVQS
                     RERLSPSEVTAIADALGQLRHD"
     gene            19271..19735
                     /locus_tag="O6Y56_001424"
     CDS             19271..19735
                     /locus_tag="O6Y56_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HDB5574679.1"
                     /translation="MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW
                     NLGEPPHEGTQKILNKHNIPFDGMISELFEATDDFDYIVAMDQSNVDNIKSINPNLKG
                     QLFKLLEFSNMEESDVPDPYYTNNFEGVYDMVLSSCDNLIDYIVKDANLKEG"
     gene            19742..20017
                     /locus_tag="O6Y56_001425"
     CDS             19742..20017
                     /locus_tag="O6Y56_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HDB5574680.1"
                     /translation="MENKFVPGILIGAVIGGAISLADKSTRQALVQSVKDAKNGNRTR
                     KPSKVSKIKDEVLYWKDVVEEIRRNNPELERSLKDAKETFVNRKNQR"
BASE COUNT         6606 a         3497 c         2864 g         7232 t
ORIGIN      
        1 tataactgta gtattgcgcg cgtgtcaata tttacatgat gatttcattt aatagccttt
       61 tttagcatcg acttcattct caattagacc attcttattg agaaaattaa ctagattgtt
      121 tttaaaaata tctaataagt catactttgc ttcataatca ttaccagtta tatgcgctgt
      181 tatagttaca ttatccaatt catataattc atgattaggt ttcaaaggtt cattttcaaa
      241 cacatctaaa tatgcatgtc gaataactct actttttaat acttctatta agagcgcttc
      301 tttaactatg ctacctcgtc ctatatttat aaaaagagct tcatctttca ttaattcaaa
      361 atgatttttc tttagtaaat gaatcgtttc ttgcgtttct ggtaaagcat ttataacaat
      421 gtcagcattt ggtaatgtgc tttcaagtga ttcgatagta tatatctcat caaactcatg
      481 tttgttctga cctgacttac tcagaccaat taaattcata ttaaaagcct ttgctaactt
      541 cgcagttcta gtagcaattg cacctgtacc taaaaataaa actgtttgtc ctgaaaggcg
      601 tttaccagtt attttcgaat catatatatg ttgtcgttgg ttatcatatg atagtttcat
      661 ctttttataa tcatctaaaa tgaaagctaa aatgtattca gataattgtt tagcttgaac
      721 accttttccg ttagttaaaa gtatgccgtg atctgcaata taatctaacg gtaatgtatt
      781 tacacccgtt gcaaaccatg cgatccattt taaatttgga caacgtcgta aaaatgcctc
      841 attgataccg ccatcataac caactaatat atctaaatca gccaagtcac tctcaggtat
      901 ttctgatgct tttttataaa atttaaaatc tacatctgaa aagcgttgtt gtaattcagt
      961 ttcaacttca cgcatacgat tcaacccaac aactttcata tatgtcaccc caaaatgttt
     1021 ttaagttctt ctatttgtgt tttaacctta accttctcga taacatctaa tactttacct
     1081 tgttcatcta ttataaaagt cgttcttaca atgcccatac tttctttgcc aaatgatttt
     1141 tttaactgat atacgctagt ttctttagct aatttaaaat cttcatctac taataaatcg
     1201 aaattcaatc cgtgcttctc aataaaattt tggtgttttt tctttgaatc accgcttata
     1261 ccatatactg caacatctaa atcattgaac atttctaaat tgtctctaaa gtcacaagct
     1321 tctgtggtac aagtaggtgt attatctcta ggataaaaat atataatcgc ctttttacct
     1381 tttaatgtat catttgtaat gacagttccg tcctgatttt ctaatttaaa tattggaaat
     1441 tgttctcctt tttgcaacat ataatcacct ttttcttcat tataataatt ttatgatacg
     1501 atattagatg aaaatattaa attaaaagag gttgatataa atgaatttta gtgaaagtga
     1561 acgtttacaa caactttcaa acgaatatat tctaggcggt gtcaattccc cttctcgttc
     1621 ttataaagct gtaggaggcg gtgcacctgt tgttatgaaa gaaggacacg gtgcatattt
     1681 atatgatgtc gatggcaata gatttattga ttaccttcaa gcatacggcc caattattac
     1741 ggggcatgca catcctcata ttactaaagc aattcaagaa caagctgcta aaggtgtttt
     1801 atttggtacg ccgactgaac tagaaattga attcagcaaa aaattacgtg atgcaattcc
     1861 atctcttgag aaaattcgct ttgtaaattc tggaacagaa gcagtcatga caacaattcg
     1921 tgttgcacgt gcatatacta aaagaaataa aattataaaa tttgctggat cttatcatgg
     1981 ccattctgat ttagtattgg ttgcagcagg tagcggccca tctcagctcg gttctccaga
     2041 ttcagctggt gttccagaaa gcgtcgcacg tgaagtcatt actgttcctt tcaatgatat
     2101 taacgcatat aaagaagcaa ttgaattttg gggtgatgaa attgccgcag tattagtaga
     2161 accaattgtt ggtaactttg gaatggtaat gcctcaacct ggatttttag aagaggttaa
     2221 tgaaatttca cataacaacg ggacactagt gatttatgat gaagtaatta ctgcattccg
     2281 ttttcattac ggtgccgctc aagacttatt aggtgttatc cctgatttaa ctgcatttgg
     2341 taaaattgtt ggcggtggtt taccaattgg aggctatggt ggacgtcaag atattatgga
     2401 acaagtagca cctctaggac ctgcatatca agctggtaca atggctggta atccgttatc
     2461 tatgaaagca ggtattgcat tactcgaagt actagaacaa gacggtgttt atgaaaaatt
     2521 agacagctta ggccaacaac tagaagaagg tttacttaaa ttaatcgaaa aacataatat
     2581 cacagctaca attaatcgta tttacggatc tttaacattg tactttacag atgaaaaagt
     2641 cacacattat gatcaagttg aacattctga cggcgaagcg ttcggtaaat ttttcaaatt
     2701 aatgttaaat caaggtatca atttagcacc ttctaagttt gaagcttggt tcttaacaac
     2761 tgaacataca gaagaagata ttaaacaaac tttaaaagct gcagactatg cttttagtca
     2821 aatgaaataa cttttaagga agtatatttt taattgaatt aaaataaaac aaatgctcac
     2881 atagtagatt cattttatat cgttaactat taacgtttaa cttgatatgt cactatgtga
     2941 gtttttattt tacaaattta tactctttta atctctgact aaagttttac atcgctatca
     3001 gtattatgta tgatttattt taacaactat aaataagctt gaattttgta actagtaagt
     3061 gtataacagt aatgaatacg aatattagat attcaataaa cttaaaaggg gcgtcattat
     3121 ttttgagact aggagctcgg atttttaaaa ctggtatagc cattatttta gctatgtcta
     3181 tcgcttcttt actacctgat gatgttggtc tgaaagcctt agctggtgtc agtgctgttg
     3241 ttgcaatgca acctagtatt tatcgttcat ttaaaacagt ttctgatcaa gcattaggta
     3301 acattatagg tgccatactt tctgttacaa tggtaacaat ttttagcgat aattttatca
     3361 ttatgggtgt taccgtcata gtacttattg ctattttatt taaatttaat ttagcacatg
     3421 ttgctacttt ggcgagtgta acagcattaa tcattatggg acaacatacc ggttctttct
     3481 atattaccgc cttttacagg tttgtacttg taatgattgg tgtcataagt tcatctctag
     3541 ttaactttgt gtttctacca cctaaatttg aaacaaaaat ttactataat tcattaaata
     3601 tatcctcaga tatttttatg tggtttaaat tagtattaaa tgatacgacg gagtttaata
     3661 atattaaaca agatagtcat aatttaaaac aacgtgtcga aaagttagag aaaatttatg
     3721 attactatag cgaagaacgt cctattacaa aaaaacatat tcaccaacag aatagaaaga
     3781 aaatactttt cagagaagta gttcagacga ctagacaagc ttatgaagta ttaaacaaat
     3841 tgtcgcgtta tcaaaacgac ttatatttac ttaataacaa tttcctatta caaatcaaat
     3901 tagatttaga ttcattaact gcttttcacg agcaaatttt agctagcctt tctaaaaaag
     3961 cacgttataa tgtgacacat gttgattatg agttagataa tccgcagaaa aaagatttat
     4021 tgtctacatt tcagcatgag ttaataaatc atccttatca aacggaatat tcgtttgcca
     4081 atgttatgca aattgttgca gccatcgaag agtatcgaca ccatttagag catttagacc
     4141 gcataagaat tagctttttc acatatcata gatctgatgc agacattgaa attgttgaag
     4201 aagactttga tttataacat taaaacaatt cctgtaatta ataccacaat gagataaagt
     4261 aatattgaat ctcgaaatta aatttaaaaa agcagtaaga ttattttcaa tgaagaaatt
     4321 ctcttactgc tttttctctg ttatgacctc accatcctgt tacaaatctt ccctacaaaa
     4381 ttgtactgaa gtcaaacaac taatacttta taagttttga atgctatata aatgctcgta
     4441 agcaccttgt tttgcaatca attcacgatg cgtacctgtt tcaacaatat gcccattttc
     4501 aattacgaca attttgtcag catgtgtaat agtagacaag cgatgcgcta cgataagtgt
     4561 cgttcgatct ttactcaaca catctaatgc ttcttgaata atggattcac tttctaaatc
     4621 aagtgcactt gttgcttcat ccaagataag aattggtgga ttatttaaaa atattctagc
     4681 aatcgataat ctttgttttt gaccacctga taatttaaca cctcgttcac ctacttcagt
     4741 gtcatatcct tgtggcaagt tcataataaa gtcatgtgca ttagccattt tcgccgcttc
     4801 aactacttct tcatctgttg ctgttggacg accaagtaaa atattttcct taactgtatc
     4861 agagaataaa atattatcct gttgcaccaa tcctatttga tttcttaaac ttcccgttaa
     4921 aaaatcttta atgttgtgac catctattaa aatttgccca gaagttacat cgtaaaatct
     4981 cggtattaag ttaattaatg ttgatttacc accaccactc atacctacga aagcaactgt
     5041 ttctcctttt tcaatactca aattaatatc ttttaaaatt ggagcttcgt tatcgttata
     5101 ttgaaaacta acatgatcaa tatcaatacg accttgttta atttcaatag gttgagcacc
     5161 aacaccattt ttaatgtcat aatcttcgtc aattaattgg aatacacggt ccattgaagc
     5221 aaaactttgc gttaaagttg taaatgatgc gactaaacga cgtaaaggcc cgaacaataa
     5281 ctccaagtat ccaacaaatg ctgcaagtgt acctactgtg attgatccag aaatagcaag
     5341 atatgcacca acaccgatga caattattgg tccaatatct gtaactgtat taattgcggc
     5401 aaaggaatag gcattccatc ttgtatgttt caacgcacgt gttaagaaat tagcgttctt
     5461 tttatcaaag tttttcgctt cattgtcttc aatcgcaaaa cttttaacga ctgaaatacc
     5521 ttgaacacgt tcatgcaaga acccttgaac ctcagctaat gcttgagatc tttcacgcgt
     5581 caattttctt aatcttccaa agaaaacgta caccgttaaa atgtaaaatg ggaagataaa
     5641 cagtgctgct aaagtcaatt tcacatctaa aaagaacatt atggatagtg caataataat
     5701 tgttatacaa tctaaccaaa tattcattaa cccggttaaa atgaaatctt ttgtttgttc
     5761 aacatcatta atcactctag atattacttg acctacttga ttattagcat aaaatctcgc
     5821 acttaaagct tgtaaatggt tgtataactt tttacgtata tcatacaata ttttattact
     5881 tgtccattgc gccaaatatt gacgtataaa ttcaattggt ggtctcacta ttacaaaaat
     5941 aaataatgcg ataccaatgg caatagttaa atgatgaact ttttcatcag tcgttagtgc
     6001 gtggttatta atcacaccat ctattgcata tttaattaaa agtggtataa gcattggtat
     6061 accaaactta attatcccaa caataatcgt tgcaaaaata cgatatttgt acggcttaac
     6121 aaattgcaaa tatcgtttaa tcatacaatc ccccctaatc aattgcccta tcctattcat
     6181 aagtataaaa atgaatagag gttggataca taatttgtag atgtaaattc ttcttacaat
     6241 ttacattttt aaaattaaga tatctcaacc tctgtcatat tcatgtgatt aaatacgttg
     6301 tcttattcgt atgttatatt ctattcaatt taatctatgg atactgtgtc cccacacgac
     6361 agcaaaagtt atcatacttc tttacatcac taagtcaata taaatgattt aatcagtatt
     6421 tacactttat ttgcttaata ttgtctaatt tttttgtaac gttctttcca aactttgata
     6481 aaatctggcg cgaatgggcc cttcttctgt tctatccatt gttgaagaat gtccacgttg
     6541 cgtcttaaaa taatatcaat atcatgcgga taattcattt gattcatatg ttgctcatat
     6601 tcatcttcat ctaataaatg atactttccg tttggatata ctttaatatc taaatcatag
     6661 tctatatatt ttaatgcctc ttcatcacaa acaaatggtg atgacaaatt gcaatagtaa
     6721 taaattccat cttctctaaa catgcagata acattaaacc aatattctga gtgaaagtaa
     6781 acaattgccg gttcacgtgt tatccaagtt cttccgtcac tttcagttac taacgtatga
     6841 tcattgccac caatgacaac atgatcagta ccctttaata ttgttgtttc agaccaaacg
     6901 cgatgaatct taccatcatg tttataactc tgaattttaa tgttttcccc ttctttaggt
     6961 atggattctc tgaccatact ccacaccacc ttctgttaat ttaaccatta taaattatag
     7021 catatttcag aaatagtatt atataaatac atatttttac gaaataagat tttactactt
     7081 aatgattaaa ctcggtaata ttgctaagta ctacaacaga gatttacatg tcccatttaa
     7141 agtatataaa atcatcactt ttatatatca acactttaac tttttgacat tgttattcta
     7201 tgagatttaa agatatcatt tatacatttt taaaattaat gtcactatat ttttcgataa
     7261 tcttatcaat catcgaatgt tacccattta taaattgata aatctttgac ataggtacag
     7321 ggaatgtata ttgatctcga tcacttaaat caaaccaaat catgtcatct ggtaatgttt
     7381 caatgttaat tgttcctgaa acggcgtata cctttatctt ccatgttaaa tgagtaaatt
     7441 gatgcttcaa ctcaaaaata ggtgtttcta ctggttgaat gtcatgaccg attttttcag
     7501 tcatttcacg tctagcatgc tcactttcaa acataggaaa ttgccacata ccatgcaata
     7561 atttttcgct acgcttttgc aacagatatt gaccttgatt atttctaatt aaaaagacgg
     7621 attgctcaat tactttttta cttacatttt tagatttaac aggtaacttt tcaaatgtac
     7681 ctttatcaaa tgcctcacag ttttcttgaa ctggacaaaa taagcataat ggatttttcg
     7741 gtgtacaaat taatgcccct aattccatca tagcttgatt aaacgttcca gattctgtag
     7801 taacatacgg taataattct tgttcgtacg atttcctcgt cgattgtaat ttaatatctc
     7861 gatagtcatc attcaatcta gaccatactc gaaaaacatt tccgtctaca gttgctagtg
     7921 gtacattata tgcaatgctc attactgcag cttgtgtgta tgggccaaca ccttttaacg
     7981 ctttaaattg atcaggatct ttgggaacta agccttcata tttatcatga acttctttaa
     8041 tagccgtatg aaaatttcga gctctactat aatatcctaa gccttcccag tactttaaca
     8101 cttcatcttc cgaagcttga ctcaaaactt ccacagttgg aaatcgttca acaaaacgat
     8161 gataatagtc aataactgtt ttaacttgtg tctgttgtaa catgacttca cttaaccaaa
     8221 tataatacgg attggtcgtt tgtcgccatg gcatttctct ttgattttca tcaaaccagt
     8281 gtatcaaatt ttctttaaaa ctagactgct gatacattta taaaaccctt tcctcaccaa
     8341 aattaattgt ctttactcat aatgttttta ttgtacatta aaatcatggt tagtatgtaa
     8401 gttaatttag ttatttgcga aattggatta taatagtata tataatatta tgaaatgagt
     8461 gaactgatat ggacactgca acacatatcg caattggggt gggccttaca gcacttgcaa
     8521 ctcaagatcc agcaatggct tctacgttcg gtgcaacagc tacaaccctt atcgttggtt
     8581 cattaattcc tgatggggat actgttctta aattaaagga caatgcaaca tatatttcgc
     8641 atcatagagg tatcacgcat tccatccctt tcacaatact atggccaatt ttaattacat
     8701 ttttaatatt cacgttcttt agtggaacca acccatttca tgtatggatg tgggctcagc
     8761 tcgcagtatt tttacatgtc tttgtagata tattcaattc ttatggtaca caagcactta
     8821 gacctatcac aaacaaatgg attcaattaa gtgtgattaa cacatttgac cctattattt
     8881 tcacagttct ttgtattggt attgtattat gggttatagg cttgcatcca tttgcagtct
     8941 tctttcctat aatcgcttta ctaatcattt attacatgat tcgttttaaa atgagagccg
     9001 taattaagca acaagcttta aaagcaattc aacaagagca tcaccctgtt aaagtatttg
     9061 ttgcgccaac aataaaattt atggaatggc gtgtcgcgat acaaactgat gcacatgact
     9121 atgttggaaa agcatatggt aggaatgtgg tgtttagtga taaagtggaa cgtcaaacat
     9181 tatcaacaga ctccatttta tggaaagtca aaggtaataa agatatacgt acttttttaa
     9241 acttttcatc aatctatcgt tggcaaacaa caacgttagc agatggttct actgaaattc
     9301 gtttgattga tttgcgttat ttaaaaaatg atcattattc atttgtggca attgcacatg
     9361 taacaaacga taatgtcata gaccactctt atattggctg ggtttttaca gaagataagt
     9421 tacaacgtaa actgtatgct aaataatttc aagttattat tcactaaagt taatctataa
     9481 aaaatgaaca accgggcaga ataaaaatca aaacgatttt tactctgtcc ggttttttaa
     9541 tgtaaaacta tgaatgcttt tacaaaacct aaaatttata ttgtcgctaa caaactacct
     9601 ttaatgactc gaaatatcaa aatcagtata ggaaaacgat atctagatta tattctaatt
     9661 gtttctgatt ctaacagatt aatttacaca acaggtcagc taaacatcat gaagaagtat
     9721 ccgcctcgtc tgtactatca tttgaaacat cttgttgatt atcagtttgt gtcactttag
     9781 atgttttatt ataaattgcg tgtgtcgtat accttgctaa tacgaaattt actgcagcta
     9841 ttaaacataa gaataaaata aagtaaaaat gatatggaat gttttccata cttgatatac
     9901 caaatatgat agattgtgct ataccattaa caatgtaata cattggattc agcattagga
     9961 tgtgattgat aaatacatga ttaggatttg gtatgaaaat aattggtaac aataagaaac
    10021 acaatacaca aatcccataa aatatgatat ttattttttc agttaatagt cgaataagac
    10081 caaaagtaac tgatattaat cctacaaaaa tagttgccat cacaataaaa tagaatagcg
    10141 ctatatacga tgtttcgaag tttactggtt taaccaatgc actaatcatc gtcaaaatga
    10201 ctagcataat aaaacttaaa atagacataa taactactgg cgtcgctgcg gaaatattaa
    10261 ataacttagt aactaaaaag tcattcatat aatgatgata agagatataa attgtgaaca
    10321 tcaataccgc aaaaacaatc aatgcaataa ttctaaataa ccatcgcacc tctttaacat
    10381 cggtcaaatg actaaaggaa aatagcgttt cactggcaat aataagtatt aaacatgcag
    10441 ctaatacgat tagaaaactt ttccaacttt gtttaaaacg ttctgttaca taccttttag
    10501 tatgcggtaa gtttttaaaa tataaaataa tattatctag catctttaca cctacaattc
    10561 aatataaatc catttgtctt ctttcaaatt ggcaatacaa tatccattcc caactttagt
    10621 aatccaaatg ttattgttaa tattaaactt atcttttaat tcttttttat ctacaattgg
    10681 ataaacaaaa ccgtataact gattattatc attgaaaagt aattgtatcg gttgttgtgt
    10741 aacggatgca acgaaacggt tatcatcatc aggaactaaa gttttaataa ctgaactatg
    10801 ctttttatgt aattgactgt taaagtatgc atagtaatta ctataatttg atttcatata
    10861 tggcgctaat tttttaaaac tatgcgtttg atataaacct gccgggttaa aatattctaa
    10921 tttatcttta ctaacatagt aagtcttatt atcggcggta acacgataat ttttactatt
    10981 ttcgccagta attgtaacta cactatattt tggaattgtg acttgtttat ccccttgcat
    11041 atccacactg ccattaaaag caattccata agctaacttt tcgccatatg gatctttatt
    11101 ttcattttgc atcgtagcac gattcgtaaa atctgttatc gaaataattc ctatattatt
    11161 gaaaatgagc aacatcatca atgctaagcc tagaatagta cctgaggcta aagtccaaaa
    11221 acgcactaaa aacttaggcg gctttgcatg attatagcgc tcaacacgtt tgaaattata
    11281 ggtcatctct ggtattcttg tacgattctt tttccaatct aaatcaaagt tttcaatttc
    11341 ttcttttgag tttagactta atcgatcacg ttcatgttct ttaaaagatg gaataacttg
    11401 tttaagtgac ccttccattc ttaattgacc atgtgaaaac caagctatat agttactcac
    11461 ttgtgaaatt ttatcaatat catcaccaat tgacacaatc gttaaattat tttcaatata
    11521 atcatttgtt aattcaatcg cacgttctat aaattgtggt gttaaatagt caataacatg
    11581 atttaaaata ataatatttg attttgatga gcgtgcaata cttaatagta attgagcgta
    11641 tgccgctttc gaaatatggt taaccggctt cgttttataa tcgcctaaat gtgcatattg
    11701 aataatctgt tcagctttat gatcattaat ttcatatgga aatagttgaa ctaactgcgc
    11761 tgtgtaagct tcaacagttt gatgaattga cgattgatct tcaatatatc cgtagaacaa
    11821 atcttcagta caaactactt tacctttatc aggtttaatt gcacctgcca acaattgacc
    11881 taccaatgct ttggaagatt caggttcacc aattatacct aatgcttctc cttgataaat
    11941 atgtaaacta atattgttta aatcgatatc ttcagcatca tatccaaaag gtaaatacca
    12001 tttcttattc tgtttattcc tatagtagtg tgttactttt agtaacttta aaacaattga
    12061 acttcccatc tattttcatc cttctataat tgtaataacg ctataggtaa gccttcttcg
    12121 ggttcatcgc tattaaatct aaacccccac gcaaaaatac cttttaatct ttctacttta
    12181 aaatattgat tactgccatc agtcagttta taaattttac caatttctat cttttttctg
    12241 tctactaagt aactttcggc aacaattact ttactttgat aaacgtcata ttcatttaaa
    12301 ataccattca tctcagcttt tctcattttc tctttataaa gttgtatttc gtgtcttaat
    12361 tctggctcag acatttcact caatttcttc tgttccatcg gcaataccac tttcttctaa
    12421 tttagcttta attttatcat atttatatcc ttttctcata aggccttcga tagtttttga
    12481 aattaatttc tgttgcgtgt acttctttcg atttttatta taaatttttt ctaaatctcg
    12541 ttgtaataaa tcgtctaaaa ccgcttcatc ttgtgtaaaa tccatttcat tcaatacagc
    12601 atgaatggtt tccatttcaa accctttttg aattaaagat tgcattactt tttctttaac
    12661 cttattttgt ggcccttttt ttgttttaga tattttttca gcaatttgga taatatcatc
    12721 aagttcttgt tgttctctat aaagttctgt aaacatttca atgatatttg gttctatacc
    12781 aagttgatat agtttttgtt gataaatttt aggtccttta tctgtcgtgc gaatcattgt
    12841 attttttaaa ctttccgcat aatcttgatg gtcgattaac ttttcgcgat aacaatattc
    12901 aatcacttca gaaatcgctt gctctgatat ctcttctttt tgtaaatata gtataacttc
    12961 tttttcagtt ctctttttat atgataaata ttggattgct ttatttaaac ctatgcgata
    13021 atgatcatac ttttgaatct ctgccatatc agcagcttca agttgttgcc ctttttttaa
    13081 attaaatttg actaatgtat cgatatctat acccatttca aattgttcgt ctaaaaaaag
    13141 attaaaacgt tctttgtttt tcttttgaac ttctatttta gtaatcttcg gcactggatc
    13201 accccgttac tttctcaagt tttaatacaa tactctttta ttattcaata agccacttcc
    13261 tatagcaaat gtttaacttt aaatattttt cgatgctaac aaaaaatcac actatcatct
    13321 tttaaaatga aagtgtgatt acaagcaaat ctgtaaaatt tattaagcag aaacaattca
    13381 actttatcat tatgacattt caattaaacc ttctacatta ttgttccaag tatcttacac
    13441 ataaatgcaa gtatttaacg atttaattgt gacatagcct gttgatattg tgcttcattg
    13501 atataatttt gttgcttcat tttttctaag ttcgtgctta cacgttgcgt aaaattctca
    13561 gacatattat tgatattata tacgctaggt gcattgactt tactagctaa aatagcgctt
    13621 tgtaaaactg taatgtgaga cattgttgta ctatttttat tcacggttgt tccaaagtaa
    13681 tggtttgctg cgccctcaag cgtatattga ttatccccaa agtaaatatt atttaaataa
    13741 aagcttaaaa tttcgttctt attatattgt ttttcaactc gatgagctac aaataattct
    13801 tttacttttc tagtaaatga acgatcatta tcataaaaat aatttttgac aacttgttgt
    13861 gtaatggtac taccaccttg cacatctctg tcgctaatcg ttgaaaataa ggctctagtt
    13921 gtacctttca aatcgaatcc atgatgattg tagaatcgtt catcttccat tgaaataaag
    13981 gcacctttaa catactctgg catgttatca gctgacacaa aactactttt attttcaatt
    14041 tttcttagtt catccacatt atcgcgtgta gataaaaaat acatgatacc aataaacaat
    14101 gcgataatga ttagaatggt taataatatt ttcaatagta ttcgtttact ttttttcttt
    14161 ttcggcggtt tgccaactgg ttgataatac gtattatagt gaggttcgtg tttcatatgc
    14221 tcaaaatgtt catttgagtt tgagtaccta tcgcttcttt tcatgcgttt gctccttctt
    14281 ttaaaactca cttagtatat aacttgagtt taccagtact atcacaaata ggctacactt
    14341 tttgggaaaa tcagtccaag ggcttacaat cgtatacgcc atcatactta cttttttgtt
    14401 ttttgaaaag attatagata aatcattgcg attttaaata ttaatcatgt caaatattgt
    14461 tatattttat aaaaataaaa gaccatccct attaaatgcc aatagagacg accttttatt
    14521 tgttattcat tttttaaaac taaaatccat atttcatttc aaacgaaaat atataaattt
    14581 taacaattga taaccgcaat actctattgt aattgcttaa cgatttctcg attaaaatca
    14641 tctaaatcgt ctggtactcg acttgttaca atattgttgt ctacaactac tgactcatca
    14701 actacatgtg cgcctgcatt tgataaatct ttgcgtacat ttaatactgc tgttaacgta
    14761 cgacctttta aatcgtttgt atctattagt atttgtggcc catgacaaat ggcaaatgtt
    14821 ggtacatcat ttttagtaaa gtatttagca aatgtgccat atcgaccttc tgtatctcca
    14881 cgtaaatggt ctggtgaaaa tcctccagga attaataatg catcataatc ttctggttta
    14941 gcttctgcaa tgcctacatc gacagtaact ttttcaccgt gtttaccaac aacttcacta
    15001 tttgcagtat ctccaatcac tacagtatta aagccagcat tctctaatgc ctctttagga
    15061 cttgaatatt ctatatcttc aaattcgttt gctagaataa ttgctacttt tttagtcatt
    15121 gaaaatcacc tttctatata tcattgatat aaatactata gacaagtaaa tcaatgatta
    15181 aacatacaag atataaaaat attaagcgac tgtcgcgata tctaactcta acacatctta
    15241 tgtggcattt acttagatac taatttaacc ttttcttcaa gctgatctaa caatccaatc
    15301 cattcatcta tgtcttcaac acgtacttca tcaggattta catgatcgat atcctcaata
    15361 aacttattta aacgcgcttt tatctgttcg attgtttgct gttcattcat aaaaagttaa
    15421 ctccttttat tttgttttct ttttcattat tatcctaaca gaaattgcgt taaagcgata
    15481 taatcttagc tatatttatg acattcaaat tattttgact tttaaaaatc cccttttcaa
    15541 ttaactaaaa ttaagagata atttgttacg agtgataata cgaagtggta tcataccgat
    15601 atgaaccaaa tagaaagaag gaagtttaag acgatgaata gcgtcaaatt gaagcaacct
    15661 gttagcattc acaatgatcc atgggaagca tataacgatg ttaaagaaca tggccaatta
    15721 actttaagta acatcgaatt tacaactaca aatctttgta atatgcgttg tagccactgt
    15781 gcagttggtt atactttaca aactgtcgac cccgagcctt tagatatgga cttaatttat
    15841 cgtagacttg atgaaattcc aaatctgcga acgatgtcaa ttacaggtgg cgaaccaatg
    15901 ttttctaaaa agtctattag aaatgttgtt aaacctctat taaagtatgc acataatcga
    15961 ggtatatata cacaaatgaa ttcaaaccta acattgcctc aagatcgtta tttagatatt
    16021 gctgaatata tcgatgttat gcatatctca cataactggg gaacaactga tgaattcgca
    16081 aatgttggct ttggcgcaat gaagaagcaa ccaccgttaa aagctaagtt aaaattatat
    16141 gaacaaatga tttcgaatgc acgtacatta tcagaacaag gaatgtttgt atctgcggaa
    16201 acaatgctca atcaaagtac gctaccacat ttacgaaaaa tacatcaaga agtcgttcat
    16261 gatatgaaat gtagcagaca cgagattcac cctatgtatc cagctgactt tgcaagtcaa
    16321 ttaaatgtgt taactctagc ggaaataaaa aagacaattc atgatatatt ggatttcaga
    16381 gatgaaaata tttggatgtt atttggtact ttgcctgtgt ttccatgctt aaaagatgat
    16441 gaagatcaaa agttactatc acgtttaaga actgctaaaa atgtaacgac tagaaatgac
    16501 ccggatggcc gtagtcgttt aaatgtcaat gtatttacag gtaatgtaat cgtaactgat
    16561 ttcggagatg aaacaggtac aatttcgaat atacaaaaag ataaattaac agatgtattt
    16621 gataaatggt tatcctctga tcttgctaaa tcattaaatt gtcattgttc tgagtttagt
    16681 tgtttaggac caaatgttct tgttaaaaat atgtactatc cgaatatgga ttttaaagat
    16741 aatgagcttc atatgcacaa acaaccacaa attatacaat tttaaaaacg cttaattatg
    16801 cggagaagca ctttatcgat aagtagtctc cgcatatttt aatgctatta caaaataaaa
    16861 aaccattaat cgctggcagc actctactta aacaataaag gtcatttaat aggaccaata
    16921 gtctataata aaagggttaa attttaacta aaagcataaa tgtacataat caaaaagaca
    16981 gattgcaggt ggaatattcg aacataacag ttcaattcat ccttaacaat ctgtctttat
    17041 atttttagtc tctaatatgt tgcacttgag ctaaatattc aattgtttgt ttactttcaa
    17101 tgcgacgtgc ttttcttcgt tcaacacgtt gtggtgctgt atcataaaac catttttcaa
    17161 catcatcttc tggatatact ccaggtacat gtttaggctt cccatcatca tctaacgcaa
    17221 caaatgttaa gtaacttaat gcagctaaat catgcttgtt attaaataca tcgtcaattc
    17281 taatttgaac gaccacttcc atcgaacttg tcccagcgta tgaaaccatc gctacgtatt
    17341 gtaatatgtc ccctgtttta atcggcttta agaaatctac tgagtctgta gatgcagtaa
    17401 ctacttgcgc accagcatgt ttcatagctg tgattgctgc aatttcatca atattagcca
    17461 tcaatgtacc accaaacatt gtatgatggt gattcgtatc ttgagggaaa acttgtctat
    17521 ttttataaca ttttgattct gacatagatt tcattggtct gtcctgattt gtcattattt
    17581 tatctcccaa tctatacttt aatcacgtat ttgaccttta aatacatgtt tcatttccta
    17641 ctcagcacct caaaataaca tttattaaaa tgttgatgcc caatttccat tttcaaatac
    17701 tagttctttt gaaccatctt cgaatatgcc ataaatagtc aaatcactac taccaatcat
    17761 gaagtcgaca tgtacgtttg aatcatttaa tccgcttgca atcttttcct caacagtcat
    17821 ttccgttcca ccttcaatat tgaaggcgta agcagatcca atcgctaaat gacatgctgc
    17881 attttcatca aataaagtat tgtaaaaaat ggtattacga tttgatatcg gtgaatcatc
    17941 aggtactaac gctacttcac ctaatcttct tgaaccttca tcggtattga ttaaatcttt
    18001 caataccgct tcaccctttt cagctgaaaa atcaataatt tctccatctt taaacatcaa
    18061 tttaaattga tcgataattg tgccgttata acttaaaggc aatttattag taacatatcc
    18121 atctactcta tttcgatccg gtgctgtaaa tacttcttca gttggtatat tagcaataaa
    18181 agcttgttcc ttgccgttaa cataacttgt agcatcttcc cagatatgat ttttcgctaa
    18241 acctactgtt aaatcagtac cttcagatac ataatgtaac gcatggtagt ttttttgctg
    18301 taacttttga gcgtaaacac ttaaattagc gatgtgttga cgccaatttt caactggatc
    18361 gttaccatca attcgcacaa tatcgaatac ctcgtcaata aacttaatat atgcttcttc
    18421 tacagatagt tcaggatata ctctcttcgc ccaagcttta gatggaaaag cagctacgac
    18481 ccatggaaat tgattttttt gtacactttc catatatcct ttaaatgcgc gtgcgttttg
    18541 ttgttgaaat gcttgtaatt tttggctatc gataccatcc attaaatcag gatcctcact
    18601 aataagtgct aaattagcag cgccacgttt aacgtaatcc attctcgctt caacatcata
    18661 tgattttatc tcatgattag caaaatgttc cacggattca ttttcaaatt ttaagcgttt
    18721 taaggttgga tcgctatata caacacgtac atctgaagcg ccacaatgat atgcttcttc
    18781 tacaattaaa tgcgttaatt ctaatgtttc tactgatgat ctaataaata ctggctgttt
    18841 tggttgaaca ttcataccaa ccttaactaa tagttcagcg tattgttgta acttttcttt
    18901 gtaattagtc aaaattccca ctcctagtcg tgtcgcaatt gtcctaaagc gtcagcaata
    18961 gctgtcactt cacttggcga taatctttct cttgattgaa caaaatcata tatatctgtt
    19021 aattcttctt catttgcatt tttatatttt tcaggatcta ataatccttg attaacaata
    19081 tttaacttct ctctaatagc taatactttc tcttcatttg tcatagccac aatgttcacc
    19141 tctaataata gttatgttat caaagtatca caatttaata aactttaata gaattttata
    19201 taatctgctt tcttattgtt taaagtcgct ataaaatggg gatataacta catagtttgg
    19261 aggaatcaaa atggtagatg tagcatttgt ctgtcttggc aatatatgtc gttctccaat
    19321 ggcagaagca atcatgcgac aaagacttaa agacagaaat attcatgata taaaagtaca
    19381 ttcaagaggt actggtagct ggaatttagg agagccgcct catgaaggta cacaaaaaat
    19441 tctcaacaaa cacaatattc catttgatgg catgattagt gaattattcg aagccacaga
    19501 tgattttgat tacattgtgg ctatggatca aagtaacgtt gataatatta aatctatcaa
    19561 tcctaatctt aagggacaat tgttcaaact gttagaattt agtaatatgg aagagagtga
    19621 tgtaccagat ccatactaca cgaataattt tgaaggtgta tacgacatgg tattatcatc
    19681 ttgtgataat ttaatagact acatcgtaaa agatgcaaat ttgaaagagg ggtagttttt
    19741 tatggaaaat aaatttgttc ctggtatttt aattggtgcc gtaattggtg gcgcaattag
    19801 tttagctgat aaatctacac gtcaagcttt agttcaatca gttaaagatg caaaaaatgg
    19861 taaccgcact cgtaagcctt ctaaagtcag caagattaaa gacgaagttt tatactggaa
    19921 agatgttgtt gaagaaattc gtcgtaataa tcctgaatta gaacgttcat taaaggatgc
    19981 gaaagaaaca tttgttaata gaaaaaatca acgctaagat gattttgttt ttataaggca
    20041 atacttaaca atttggtgta cgcctttcat agttatcatt attaaatgat aatacaatga
    20101 ttggccaaac tgcattgttt cagtattgcc tttgttttaa ttttaaatca aaatagccta
    20161 tgaaagattt aaatcaatta atttctataa tattatcat
//
LOCUS       DALMNS010000048        20195 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.048, whole genome shotgun sequence.
ACCESSION   DALMNS010000048 DALMNS010000000
VERSION     DALMNS010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20195
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.048"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..1156
                     /gene="scpA"
                     /locus_tag="O6Y56_001426"
     CDS             <1..1156
                     /gene="scpA"
                     /locus_tag="O6Y56_001426"
                     /EC_number="3.4.22.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cysteine protease staphopain A"
                     /protein_id="HDB5574681.1"
                     /translation="FPKLIALSLIFSLSITPIANGESNSNIKAKDKKHVQVNVEDKSV
                     PTDVRNLAQKDYLSYVTSLDKIYNKEKASYTLGEPFKIYKFNKKSDGNYYFPVLNTEG
                     NIDYIVTISPKVTKYSSSSPKYTINVSPFLSKALNQYKDQQITILTNSKGYYVVTQNH
                     KAKLVLKTPRLEDKKLKKTESIPTGNNVTQLKQKASVTMPTSQFKSNNYTYNEQYVNK
                     LENFKIRETQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQRFQFTGLT
                     PREMIYFGQTQGRSPQLLNRMTTYNEVDNLTKNNKGIAVLGSRVESRNGMHAGHAMAV
                     VGNAKLDNGQEVIIIWNPWDNGFMTQDAKNNVIPVSNGDHYRWYSSIYGY"
     gene            1187..1513
                     /locus_tag="O6Y56_001427"
     CDS             1187..1513
                     /locus_tag="O6Y56_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphostatin A"
                     /protein_id="HDB5574682.1"
                     /translation="MEQIELFSIDKFKCNSEATYYLNIIEGEWHPQDLNDSPLKFILS
                     TSDDSDYICKYINTEHKQLTLYNKNNSSIVIEIFIPNDNKILLTIMNTEALGTSPRMT
                     FIKHKS"
     gene            complement(1806..1979)
                     /locus_tag="O6Y56_001428"
     CDS             complement(1806..1979)
                     /locus_tag="O6Y56_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NETI motif-containing protein"
                     /protein_id="HDB5574683.1"
                     /translation="MKFKVNENETIADCLSRMKMQGYMPVKRIEKPVFQEQNDGTVEV
                     SHQEIIFVGKKIQ"
     gene            complement(1960..2562)
                     /locus_tag="O6Y56_001429"
     CDS             complement(1960..2562)
                     /locus_tag="O6Y56_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2179 domain-containing protein"
                     /protein_id="HDB5574684.1"
                     /translation="MSFVTENPWLMVLTIFIINVCYVTFLTMRTILTLKGYRYIAASV
                     SFLEVLVYIVGLGLVMSNLDHIQNIIAYAFGFSIGIIVGMKIEEKLALGYTVVNVTSA
                     EYELDLPNELRNLGYGVTHYAAFGRDGSRMVMQILTPRKYERKLMDTIKNLDPKAFII
                     AYEPRNIHGGFWTKGIRRRKLKDYEPEELESVVEHEIQSK"
     gene            complement(2834..3655)
                     /gene="nadE"
                     /locus_tag="O6Y56_001430"
     CDS             complement(2834..3655)
                     /gene="nadE"
                     /locus_tag="O6Y56_001430"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HDB5574685.1"
                     /translation="MSKLQDVIVQEMKVKKRIDSAEEIMELKQFIKNYLQSHSFIKSL
                     VLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQKDADEVEQALRFIEP
                     DEIVTVNIKPAVDQSVQSLKEAGIVLTDFQKGNEKARERMKVQFSIASNRQGIVVGTD
                     HSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAYLGAPKELYEKTPTADLEDDKP
                     QLPDEDALGVTYEAIDNYLEGKPVTPEEQKVIENHYIRNAHKRELAYTRYTWPKS"
     gene            complement(3648..5117)
                     /locus_tag="O6Y56_001431"
     CDS             complement(3648..5117)
                     /locus_tag="O6Y56_001431"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500623.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDB5574686.1"
                     /translation="MYQLEDDSLMLHNDLYQINMAESYWNDNIHEKMAVFDLYFRKMP
                     FNSGYAVFNGLKRVIDFIEHFGFSESDLEYLKSIGYKDDFLSYLKDLKFTGSIRSMQE
                     GELCFGNEPLLRVEAPLIQAQLIETILLNIVNFHTLITTKASRIRQIASNDKLMEFGT
                     RRAQEIDAALWGARAAYIGGFDSTSNVRAGKLFGIPVSGTHAHAFVQTYGDEYVAFKK
                     YAERHKNCVFLVDTFHTLKSGVPNAIKVAKELGDKINFVGIRLDSGDIAYLSKEARRM
                     LDEAGFTETKIIASNDLDEETITSLKAQGAKVDSWGVGTKLITGYDQPALGAVYKLVA
                     IENEDGSYSDRIKLSNNAEKVTTPGKKNVYRIINKKTGKAEGDYITLENENPYDEQPL
                     KLFHPVHTYKMKFIKSFEAIDLHHNIYENGKLVYQMPTEDESREYLAQGLQSIWDENK
                     RFLNPQEYPVDLSKACWDNKHKRIFEVAEHVKEMEEDNE"
     gene            5301..6377
                     /locus_tag="O6Y56_001432"
     CDS             5301..6377
                     /locus_tag="O6Y56_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide synthase oxygenase"
                     /protein_id="HDB5574687.1"
                     /translation="MLFKEAQAFIENMYKECHYETQIINKRLHDIELEIKETGTYTHT
                     EEELIYGAKMAWRNSNRCIGRLFWDSLNVIDARDVTDEASFLSSITYHITQATNEGKL
                     KPYITIYAPKDGPKIFNNQLIRYAGYDNCGDPAEKEVTRLANHLGWKGKGTNFDVLPL
                     IYQLPNESVKFYEYPTSLIKEVPIEHNHYPKLRKLNLKWYAVPIISNMDLKIGGIVYP
                     TAPFNGWYMVTEIGVRNFIDDYRYNLLEKVADAFEFDTLKNNSFNKDRALVELNYAVY
                     HSFKKEGVSIVDHLTAAKQFELFERNEAQQGRQVTGKWSWLAPPLSPTLTSNYHHGYD
                     NTVKDPNFFYKKKESNANQCPFHH"
     gene            6397..7191
                     /locus_tag="O6Y56_001433"
     CDS             6397..7191
                     /locus_tag="O6Y56_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HDB5574688.1"
                     /translation="MQLYYLGPKGTFSYLACRQYFSENEATFQPKSNLFEVIKAVADD
                     DTSIGVVPIENSIEGTINIVADALAQQDVFAHGEIRLDINFALYGNGTDSISDIKKVY
                     SIAPAISQTTNYIHLHQFDYDYVDSTIQSLTKIENGVAAIAPLGSGEAYGFTPIDTHI
                     EDYPHNVTRFLVIKNQQQFDQNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIE
                     SRPLKTQLGMYRFFVQADSAITTDIKKVIAILETLDFKVEMIGAFN"
     gene            7262..7369
                     /locus_tag="O6Y56_001434"
     CDS             7262..7369
                     /locus_tag="O6Y56_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574689.1"
                     /translation="MVDFLLFVLFLHDAAVYVSLPLVQAIANVTFYFSF"
     gene            complement(7380..8942)
                     /locus_tag="O6Y56_001435"
     CDS             complement(7380..8942)
                     /locus_tag="O6Y56_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HDB5574690.1"
                     /translation="MAYFNQHQSMISKRYLTFFSKSKKKKPFSAGQLIGLILGPLLFL
                     LTLLFFHPQDLPWKGVYVLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQV
                     SSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSKILLGFMVATGFLS
                     MFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGT
                     LIGTPPLIILKGQYMQHFGHEISFAKWMIVGIPTVIVLLGITWLYLRYVAFRHDLKYL
                     PGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLLWITREFLLKKWEVTSSVADGTIAI
                     FISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGE
                     QLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAP
                     AAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYVMPIV
                     LGIDINQPLPLK"
     gene            complement(9147..10244)
                     /locus_tag="O6Y56_001436"
     CDS             complement(9147..10244)
                     /locus_tag="O6Y56_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pectate lyase"
                     /protein_id="HDB5574691.1"
                     /translation="MYINMKDYGLTGINKTKDTRAIQRALNHGRCKPTTVYIPKGTYD
                     ICKPLTIYGNTTLLLDNETILRRCHSGPLLKNGHRFGFYRGYNGHSHIHIKGGKFDMN
                     GVSYPYNNTAMCIGHAEDIQLIGVTIKNVVSGHAIDACGINGLYIKNCSFEGFVDYSG
                     ERFYSEAIQLDIQVPGAFPKFGTTDGTITKNVIIEDCYFGPSELPEMGSWNRAIGSHA
                     SRHNRYYENIHIRNNIFEDIQGYALTPLKYKDAFIINNKFINCEGGIRYLGVRDGKNA
                     ADVMTGKDLGSQAGINMNIIGNEFKGSMSKDAIHVRNYNNVKHKDVLIVGNTFNNSTQ
                     SIHLEDIDTVFLSPVEAGIQVTTINVDEIKK"
     gene            10616..11176
                     /locus_tag="O6Y56_001437"
     CDS             10616..11176
                     /locus_tag="O6Y56_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HDB5574692.1"
                     /translation="MTHRALLVVDYSYDFIADDGLLTCGKPGQNIEDFIVSRINDFNY
                     YQDHIFFLMDLHYLHDIHHPESKLFPPHNIVDTSGRELYGKVGKLYETIKAQPNVHFI
                     DKTRYDSFFGTPLDSLLRERSINQVEIVGVCTDICVLHTAISAYNLGYKISVPAEGVA
                     SFNQKGHEWALAHFKNSLGAEVEQHV"
     gene            11229..12158
                     /locus_tag="O6Y56_001438"
     CDS             11229..12158
                     /locus_tag="O6Y56_001438"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-dependent inorganic pyrophosphatase"
                     /protein_id="HDB5574693.1"
                     /translation="MAKTYIFGHKNPDTDAISSAIIMAEFEQLRGNSGAKAYRLGDVS
                     AETQFALDTFNVPAPELLTDDLDGQDVILVDHNEFQQSSDTIASATIKHVIDHHRIAN
                     FETAGPLCYRAEPVGCTATILYKMFRERGFEIKPEIAGLMLSAIISDSLLFKSPTCTQ
                     QDVKAAEELKDIAKVDIQKYGLDMLKAGASTTDKSVEFLLNMDAKSFTMGDYVTRIAQ
                     VNAVDLDEVLNRKEDLEKEMLAVSAQEKYDLFVLVVTDIINSDSKILVVGAEKDKVGE
                     AFNVQLEDDMAFLSGVVSRKKQIVPQITEALTK"
     gene            complement(12351..12524)
                     /locus_tag="O6Y56_001439"
     CDS             complement(12351..12524)
                     /locus_tag="O6Y56_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574694.1"
                     /translation="MNVVAVNFKWSFELYMLKVENRAMNRVHNNIYNFNHNEKGRKKT
                     KIYTQHRKYFKKM"
     gene            12576..13955
                     /locus_tag="O6Y56_001440"
     CDS             12576..13955
                     /locus_tag="O6Y56_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HDB5574695.1"
                     /translation="MNIIEQKFYDSKAFFNTQQTKDISFRKEQLKKLSKAIKSYESDI
                     LEALYTDLGKNKVEAYATEIGITLKSIKNARKELKNWTKTKNVDTPLYLFPTKSYIKK
                     EPYGTVLIIAPFNYPFQLVFEPLIGAIAAGNTAIIKPSELTPNVARVIKRLINETFDA
                     NYIEVIEGGIEETQTLIHLPFDYVFFTGSENVGKIVYQSASENLVPVTLEMGGKSPVI
                     VDETANIKVASERICFGKFTNAGQTCVAPDYILVHESVKDDLITALSKTLREFYGQNI
                     QQSPDYGRIVNLKHYHRLTSLLNSAQMNIVFGGHSDEDERYIEPTLLDHVTSDSAIMQ
                     EEIFGPILPILTYQSLDEAIAFIHERPKPLSLYLFSEDENATQRVINELSFGGGAIND
                     TLMHLANPKLPFGGVGTSGMGRYHGKYSFDTFTHEKSYIFKSTRLESGVHLPLYKGKF
                     KYIKAFFKN"
     gene            complement(14075..15103)
                     /locus_tag="O6Y56_001441"
     CDS             complement(14075..15103)
                     /locus_tag="O6Y56_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HDB5574696.1"
                     /translation="MTNGYIGSYTKKNGKGIYRFELNENQSRIDLLETGFELEASTYL
                     VRNNEVLYGINKEGEQCGVASLKIDDNGELHLLNKCLSSKAGTGCYVSISGDKRYLFE
                     AVYGAGIIRMYELNTHTGEIIRLIQELAHDFPTGTHERQDHPHAHYINQTPDGKYVAV
                     TDLGADRIVTYKFDDNGFEFYKESLFKDSDGTRHIEFHDNGKFAYVVHELSNTVSVAE
                     YNDGKFEELERHLTIPENFDGDTKLAAVRLSHDQQFLYVSNRGHDSIAIFKVLDNGQH
                     LELVTITESGGQFPRDFNIASSDDLLVCAHEQGDSVVTVFERNKETGKITLCDNTRVA
                     SEGVCVIF"
     gene            15374..15775
                     /locus_tag="O6Y56_001442"
     CDS             15374..15775
                     /locus_tag="O6Y56_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YolD-like family protein"
                     /protein_id="HDB5574697.1"
                     /translation="MTSYEEETDYRNVPRELLDNNIPMGRGMIKWAPFATLPEQFETI
                     QQYIIDQNKITRPVLSDDQLAELNIRLHEALQYAQPVEVKFYNNGFVDSVRLTIYRID
                     AINYEIDGYVYNQQQRQKISIFDILDIVLLP"
     gene            complement(15832..16005)
                     /locus_tag="O6Y56_001443"
     CDS             complement(15832..16005)
                     /locus_tag="O6Y56_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574698.1"
                     /translation="MWNFIKCVFKFVFSLVAITTLVAGVGLVAFAYIFKKDFEDIERK
                     TKEIISDIESKNN"
     gene            16456..17496
                     /locus_tag="O6Y56_001444"
     CDS             16456..17496
                     /locus_tag="O6Y56_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="linear amide C-N hydrolase"
                     /protein_id="HDB5574699.1"
                     /translation="MQQVTSDIMTFRGSHFELGVKTGKWLQQTPLLKNREKEWKKRVP
                     RFDIDVNETYQIFQTYAPQIWEELMGLQSILKMPTRQIILNFGHYRFTDLKESGCTVF
                     QGKDFMVRNYDYHPATYDGRYLLYQPTDSGLAQIGPVSRVTGRMDGMNESGLTMGYNF
                     MHRKKPANGFVCYMIGRLILENCQNVTEAIQLLKEIPHRSSFSYILMDKSLNHAIVEV
                     TPRSIDVRYDNICTNHFEILSHENRNYTKESKERLARTISQTNNNLDMTTAFKLFNNP
                     QYEIYSKLFKSWSGTIHTSMYHPETLTAYFTLGENAPPEIIDFKSWLDGQDLNITHFT
                     GNIDTDLTFANK"
     gene            complement(17553..18395)
                     /locus_tag="O6Y56_001445"
     CDS             complement(17553..18395)
                     /locus_tag="O6Y56_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat protein"
                     /protein_id="HDB5574700.1"
                     /translation="MKKFFFIGLLVFVVFFTAATIIWFSYDKNKYGTKQYDKTFKDDA
                     FDNVSINLDSTELRIKRGNQFRVKYDGDNDILINIVDKTLKVSDKRSKTRGYAIDMNP
                     FHENKKTLTIEMPDKMIKRLNISSGAGSVRISDVDLENTSIQSINGEVVIKNSNLDAL
                     DSKTNNSPTYISKSNIKNSNIKVVIGTLQIDKSQIKQSIFLNDHGDIEFKNMPSKVDA
                     KASTKQGDIRFKYDSKPEDTILKLNPGTGDSVVKNKTFTNGKVGKSDNVLEFYTIDGN
                     IKVE"
     gene            complement(18392..18949)
                     /locus_tag="O6Y56_001446"
     CDS             complement(18392..18949)
                     /locus_tag="O6Y56_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001669025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1700 domain-containing protein"
                     /protein_id="HDB5574701.1"
                     /translation="MNKITYLNELETALDALPRHLRDQKMYEYERYFYEQELNGVDEE
                     EILKKLKDPQDVAAETKARSVIDYAESKPTFENISRAVAASLSLGILSIFVILIPVSI
                     VGLFVLALFLISLLLLFCPIILLASAISRGIVDSISNVFFAISYSGLGLVFIIVIFKI
                     LEYIYRLILKYLLWYIKTVKGSVRK"
     gene            complement(19009..19533)
                     /locus_tag="O6Y56_001447"
     CDS             complement(19009..19533)
                     /locus_tag="O6Y56_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001641610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574702.1"
                     /translation="MLYLNKYKERVTSVRIQNRWVVFILFLICSFGVLIGLYQYRHTK
                     TVDLSNLEINDIKLNEKFDKKGYEVNKKIKFDRFKFYNSKAHPDLTVKVREKDNIVKG
                     IILVRDEKIHTNFDGGIGSPINNAIENLGFGYKRTKVGNDFSSVKYIDRDNHLKLNLL
                     YQDLEIKRIEFFSK"
     gene            19654..>20195
                     /locus_tag="O6Y56_001448"
     CDS             19654..>20195
                     /locus_tag="O6Y56_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDB5574703.1"
                     /translation="MTNLETYFKNSQPLNEYIDGMKTNQDTVLSIYQSFELPEDDSRI
                     KKIKEMNYSKILVITEDWCGDAMMNLPILKHISEALNLEVRVFHRDDDTKLIDQYLTN
                     GKSRAIPIFVFLNDQFEQETVWGPRANEVQKFVTDVRADKLPSKDHPDYADLEKETHL
                     VISNRYKTDASFWKAVYNSIL"
BASE COUNT         6916 a         3522 c         2886 g         6871 t
ORIGIN      
        1 ctttccaaaa ttaatagctt taagtttaat attttcttta agtattaccc ctattgcaaa
       61 cggtgagagc aattcaaata tcaaagcaaa agataagaag catgtgcaag ttaatgtcga
      121 ggacaagagt gttcctactg acgtacgtaa tttagcgcaa aaagactatc tttcttatgt
      181 tacttcactt gataaaatct ataataaaga gaaagcctcg tatacacttg gtgaaccttt
      241 taaaatttat aaattcaaca aaaagagtga tggtaattat tattttcctg ttttgaacac
      301 tgaaggtaat atcgattata tagttacaat ttcaccaaaa gtcactaagt attctagttc
      361 atctcctaaa tacacaatca atgtttcccc atttttatct aaagccttaa atcaatataa
      421 agatcaacaa attactattt tgacaaactc aaaaggttac tatgtggtta ctcaaaatca
      481 taaagctaaa ctcgtactaa aaacaccacg tctagaagat aaaaagttaa aaaagaccga
      541 gagtatacct actggcaata atgtaacgca actaaagcaa aaagcttctg tcactatgcc
      601 aactagtcaa tttaaaagta ataattatac ttacaacgag caatatgtaa ataaacttga
      661 gaatttcaag ataagagaaa ctcaaggtaa caatggttgg tgtgcaggct atacgatgtc
      721 tgcattacta aatgcgactt ataatactaa caaatatcat gcagaagctg tgatgagatt
      781 tttacaccca aacttacaag gacaacgatt ccaatttact ggtttaacgc caagagagat
      841 gatttatttt ggacaaactc agggaagaag tccacaactt cttaatagaa tgactacata
      901 taatgaagtt gacaatctta ctaaaaataa taaaggaatt gctgttttag gtagtagggt
      961 agaatcaaga aatggtatgc acgcagggca tgccatggca gttgttggga acgctaaatt
     1021 agataatgga caagaggtta taattatatg gaatccatgg gataatggtt ttatgactca
     1081 agatgctaaa aacaatgtta ttccagtatc caatggcgac cattatcgat ggtattcatc
     1141 tatttatggt tattaaaatt tgtattttag aaaggtaaat aatattatgg aacaaattga
     1201 attatttagt attgataaat tcaaatgtaa ttcagaggct acgtattatc ttaatattat
     1261 tgagggagaa tggcatcctc aagatttaaa tgatagccct ttaaaattta ttctcagtac
     1321 ctcagacgat tctgattaca tttgcaaata tataaataca gaacacaaac aactcacatt
     1381 atataataaa aataatagct caattgttat tgaaatattt ataccaaatg ataataaaat
     1441 actactaaca attatgaaca cagaagcttt gggaacttct cctagaatga ctttcattaa
     1501 gcataagtca taagactatc tagatatgat taagtaaact attaatctta ttaaaggtct
     1561 ctaggaagaa aaaatttcat gcgatgagat tgttttagaa aaagcgacga tatatatata
     1621 atctaacaat aattttaaaa tattaagaac ccccagcata tgctttatat agcttgctgg
     1681 gggtttctca tacaatatgg attaagcatc ttgcatgtat aaacacttag gctattcaaa
     1741 gtaaaattac tcaaactttg aatagccttt cctcttcaaa tagtctttat ttaaattgga
     1801 ttatgttatt ggattttctt acctacaaaa atgatttctt gatgcgatac ttcaaccgtg
     1861 ccatcatttt gttcttgaaa cacgggtttt tcaatacgtt ttaccggcat atacccttgc
     1921 attttcattc gtgacaaaca atcagcaatt gtttcattct catttacttt gaatttcatg
     1981 ttctactaca ctttccagtt cttctggttc ataatcttta agctttctac gacgaatgcc
     2041 tttagtccag aatccaccat gtatgtttcg aggttcatac gcaatgataa atgctttcgg
     2101 atctaaattt tttatcgtat ccatcaattt acgttcatat tttcttggtg ttaaaatttg
     2161 catcaccata cgactaccat ctctaccaaa cgcagcatag tgcgtaacgc catatcctaa
     2221 atttcgaagt tcattcggta aatctaactc atattctgct gaagttacat ttacaactgt
     2281 ataacctaat gccagttttt cttctatttt cataccaaca atgataccta ttgaaaaacc
     2341 aaatgcgtag gcaataatat tttgaatatg gtctaaatta gacataacca aacctaaacc
     2401 aacgatataa actaatactt ctaaaaaact aactgatgca gcaatataac gataaccttt
     2461 caacgttaaa attgttcgca tcgttaaaaa cgttacataa caaacgttaa tgataaatat
     2521 agttagtacc attaaccatg gattttctgt tacgaatgac ataagacgcc ccactctctt
     2581 tcaattacac tttaaatacc aaactgcttc aaactaacct taatgaatgc atattaatat
     2641 aatatagtac gaaaactctc ataaataaat agcgaatttg tcataaataa aaatttattc
     2701 tcaaatgaac atacttacat tagttcatac actatcaatt tatatactga agtagcctag
     2761 ctgaatgtgg tttaacgtta ttaattctaa ctcatattta atttaagtca cacgtttaga
     2821 agaaaaaatt aaactaggat tttggccacg tgtatcttgt atatgcaagt tcacgtttgt
     2881 gtgcatttcg tatataatga ttttcaatta ctttttgttc ttctggcgta actggcttac
     2941 cttctaaata attatcaatc gcctcataag ttacacctaa tgcatcttca tctggaagct
     3001 gtggtttatc atcttctaaa tcagcagttg gcgttttttc atataattcc tttggcgcac
     3061 caagatacgc taataattga cgaccttgtc gtttattcaa accaaatata ggtgcgatat
     3121 ctgcagcacc atcaccgtac ttcgtataaa aaccagttat attttcagct gaatgatctg
     3181 ttcctactac aataccttgt cggtttgaag caattgaaaa ttgtactttc atacgttcac
     3241 gcgctttttc atttcctttt tggaaatctg taagaacaat accggcttct tttaatgatt
     3301 gcacactttg atcaactgca ggtttaatat ttacagtaac tatttcgtct ggttcaatga
     3361 atcgcaaagc ttgctcaact tcatcagcat ctttttgaac tccataaggt aatttaactg
     3421 caataaacgt acaatcaatg ccttcttcac gtaattcgtt aacagacatt tgtactaatt
     3481 ttccaactaa tgtagaatct tgtcctcctg aaatacctaa cactaaagat tttataaatg
     3541 aatgtgattg tagataattt tttataaatt gctttaattc cataatttct tcagcactat
     3601 cgatgcgctt tttcactttc atttcttgta caataacgtc ttgtaattta ctcattatct
     3661 tcttccatct ccttaacgtg ttccgcaact tcaaaaatac gtttatgttt attatcccaa
     3721 catgccttgc ttaaatcgac tggatattct tgtggattaa ggaaacgctt attttcatcc
     3781 caaatagatt gtaatccttg tgctaaatat tcacgtgatt catcttctgt tggcatttga
     3841 tatactaatt taccattttc ataaatatta tgatgcaaat caatggcttc gaaagatttt
     3901 ataaacttca ttttataagt atgcactgga tggaataatt ttaaaggttg ttcatcgtat
     3961 ggattttcat tttccaaagt aatataatcg ccttctgctt tacctgtttt cttgtttata
     4021 atgcgatata catttttctt acctggcgtc gtaacctttt cagcgttatt tgataattta
     4081 atacgatcac tatatgaacc atcttcattt tcaatagcta caagtttata tactgcacct
     4141 aatgctggtt gatcgtatcc tgtaatcagc tttgtaccaa cgccccaaga atctactttt
     4201 gcaccttgtg ctttcaaact cgtaatcgtt tcttcatcca aatcattaga cgcgataatt
     4261 ttagtttcag taaatcctgc ttcatcaagc atacgtcttg cctctttaga taaataagcg
     4321 atatctccag aatccaatcg aatacctaca aagttaattt tgtcacctaa ttcttttgca
     4381 acttttattg catttggcac gccagatttt aaagtatgga atgtatctac taggaacaca
     4441 caatttttat gtctttcagc atattttttg aaggcaacat attcgtctcc ataagtttgg
     4501 acaaatgcgt gtgcatgtgt accagacaca ggtataccaa ataatttacc tgccctaaca
     4561 ttacttgtag aatcaaagcc cccgatgtaa gcagctctag cgccccacaa tgctgcatca
     4621 atttcttgcg cacgacgtgt accaaactcc attaatttat catttgatgc aatttgacga
     4681 attctactag cctttgttgt aattagtgta tggaaattta caatgtttaa taaaattgtt
     4741 tctattaatt gcgcttgaat caatggtgct tctacgcgta acaatggttc gttaccaaag
     4801 cataattcgc cttcttgcat cgaacggatg ctgcctgtga attttaaatc ttttaaatat
     4861 gataagaaat catccttgta gccaatagac tttaaatatt ccaaatcaga ttctgaaaat
     4921 ccaaaatgtt ctataaaatc aatgacgcgt tttaaaccat taaaaacagc atagccacta
     4981 ttaaatggca tttttctaaa atacaaatca aatacagcca ttttttcatg aatattatca
     5041 ttccaataac tttcagccat atttatttga tataagtcat tatgtaacat taaactgtcg
     5101 tcttctaatt ggtacacttg tatctctcca atcgacctaa atattttctt acattttatc
     5161 ataattcatt tttttatata cataagagcc ccttaatttc catactttta attaaaatca
     5221 accaacaatt taatgacata tacataattt ttaagagtat tttaataatg tagactataa
     5281 tataaagcga ggtgttgtta atgttattta aagaggctca agctttcata gaaaacatgt
     5341 ataaagagtg tcattatgaa acgcaaatta tcaataaacg tttacatgac attgaactag
     5401 aaataaaaga aactgggaca tatacacata cagaagaaga acttatttat ggtgctaaaa
     5461 tggcttggcg taattcaaat cgttgcattg gtcgtttatt ttgggattcg ttaaatgtca
     5521 ttgatgcaag agatgttact gacgaagcat cgttcttatc atcaattact tatcatatta
     5581 cacaggctac aaatgaaggt aaattaaagc cgtatattac tatatatgct ccaaaggatg
     5641 gacctaaaat tttcaacaat caattaattc gctatgctgg ctatgacaat tgtggtgatc
     5701 ctgctgaaaa agaagttaca cgcttagcaa atcacttagg ttggaaagga aaaggtacta
     5761 attttgacgt gttaccactg atttaccaat tacctaatga gtcagttaaa ttttacgaat
     5821 atcctacttc attaattaaa gaagtaccta ttgaacataa tcattatcca aaattaagaa
     5881 aattgaactt aaaatggtat gcagtcccta tcatttccaa tatggactta aaaatcggtg
     5941 gcattgtata tccaactgca ccctttaacg gttggtatat ggtaactgaa attggcgtac
     6001 gtaactttat tgatgattac cgttacaatt tactagaaaa agttgcagat gcgtttgaat
     6061 ttgatacact taaaaataat tcatttaata aagatcgagc acttgttgaa ttgaactatg
     6121 ctgtgtatca ttcctttaaa aaagaaggcg tatcaattgt cgatcatttg accgctgcaa
     6181 agcaattcga actattcgaa cgtaatgaag cacaacaagg tcgtcaagtt accggaaaat
     6241 ggtcttggct agcaccgcca ttatctccaa cattgacgtc aaattatcat cacggatatg
     6301 acaatacagt aaaagatcca aactttttct ataaaaagaa agaatcaaat gctaaccagt
     6361 gccctttcca tcattaagtt agtagaggtg tagcatatgc aattatatta tttaggccct
     6421 aaaggtacat tttcatattt ggcttgtcgt cagtattttt ctgaaaatga agcaactttt
     6481 caaccaaagt caaatttatt tgaagtcatc aaggcagttg cagatgatga cacatcgatt
     6541 ggtgttgtcc ctattgaaaa ttctatagaa ggaacaatca acattgtggc agatgcactt
     6601 gcacagcaag atgtctttgc acacggtgaa atacgtttag atattaactt tgcattatat
     6661 ggtaatggaa cagattccat ttctgatatt aaaaaagtgt attctattgc accagcgatc
     6721 agtcaaacaa caaattacat acatctacat caatttgact atgattatgt cgacagtaca
     6781 attcaaagtt tgactaaaat tgaaaatggc gttgcagcaa ttgcaccttt aggtagtggc
     6841 gaagcttatg gttttacacc tattgataca catattgaag actatccaca taacgtgaca
     6901 cgttttttag ttataaaaaa tcagcagcaa tttgatcaaa atgcgacatc attgatgttt
     6961 ttaattacac caatgcatga taaacctggg ttgttagcaa gtgtgcttaa tacatttgct
     7021 ttgtttaata ttaatttatc ctggattgag tctcgtcctt taaaaacaca attaggtatg
     7081 tatcgatttt tcgttcaggc tgattctgca attacaaccg atataaagaa agtcattgct
     7141 attttagaaa ccttagattt caaagtagaa atgattggcg cttttaatta aactttattt
     7201 tctaggttct acaatttaaa taaataaaga gtcaaccaag gattaaaata ggaatccatc
     7261 cttggttgac tttcttttgt ttgtattgtt tttacacgat gctgcggtat acgtttcgtt
     7321 accactcgtt caagcaattg ctaatgtaac tttttatttt tcgttctaat ccgcaattac
     7381 tatttcaatg gcagtggttg atttatatca atacctaaaa ctataggcat tacataatac
     7441 acgactaaaa taataattat tgcactaatt aagtttaccc agaatcctac tgatgccatt
     7501 tgtttgatag atattttacc tgaaccaaag ataattgcat tcggtggtgt ccctactggt
     7561 aacatgtatg cacagttagc cgccatagct gctggtgcca taagtagtaa tggatgcact
     7621 ccaacagcaa cagacaacgt tgctaaaatc ggtaaaatca tcgttgcagt tgcggtatta
     7681 gatgtcactt cagttaaaaa taagacaaag atcgttatga cgattacaat aagaatcgga
     7741 ctaacaccat ttaatgattt caactgttcg cctaaccatt ttgctaaacc actttctgat
     7801 atacctttag ctaatgctaa accgccacca aataaaatta atacacccca cgggagctct
     7861 tttgcaactt cccagtcaat gatacgacga tgtttttcag tatttttagc tggaataata
     7921 aataataata ttgatataaa aatagcaatc gtaccatctg caacggatga cgtaacttcc
     7981 cattttttca gaagaaactc tcttgtaatc cataataagc tggcaagtac aaagatagtt
     8041 tgtactacct tttcttcata cttcattttg ccaagctcgt ctaacttttg tttaattaac
     8101 gtctgaccac caggtaaata tttcaaatca tgtctaaacg caacatatct taaatagagc
     8161 caagtaatac ctaacaaaac aatgaccgtt ggaatcccta caatcatcca tttagcaaaa
     8221 ctaatttcat gtccaaaatg ttgcatgtat tgtcctttta aaataattag cggcggcgtt
     8281 ccgataagtg tacctaatcc gccaatcgta cctgcatagc caattgctaa aactagagat
     8341 ttttcaaact tttgaatact tgtttgattc gtattggctt cttgtaaatc atgtgcttcc
     8401 ttaataattg ctaaaccaat cggaatcatg atcattacag ctgcagtgtt cgatacaaac
     8461 atagataaga atcctgttgc caccatgaat ccaagtaata tttttgaagt gcttgcacca
     8521 attaaattaa taatagtcaa agctactctc gtatgtaaat tccatctttc cattgcaatt
     8581 gccaaaataa atccacctaa aaacaaaaag ataatatcat tgccatattc ggatgatact
     8641 tgttctggtg taagtatgtg acctaatggt aataacacaa ttggtaataa gcttgttgct
     8701 gcaataggaa ttgcttcagt aatccaccaa gtcgcaatcc ataaagtaat tgctaaaaca
     8761 tagacgcctt tccaaggtaa gtcttgtgga tgaaagaata ataatgttaa taggaaaagt
     8821 aatggaccta atattagtcc aataagttgt cccgcactaa acggtttctt tttctttgat
     8881 tttgaaaaga atgttaaata ccttttcgat atcattgatt gatgttgatt gaaataagcc
     8941 ataaatttcc ccctcatgat gattatgaca agctacttca actcactata ttagagtata
     9001 gaaagttgtc tatcttgtat tatcattacc gtcaaaatac cccttttatc agataattgg
     9061 gtttattata gcatatttat accgttttat gaatgcgctt tcaaaagatt atttactatc
     9121 ttaattctaa tgtcatgcga aactttttac ttttttattt catctacatt gattgtagta
     9181 acttgaatac ccgcttcaac aggacttaaa aacactgtat caatatcttc caaatgaatt
     9241 gattgagtcg aattattgaa tgtattacca acgattaata catctttatg tttaacatta
     9301 ttataattac gtacatgtat cgcatcttta gacattgatc ctttaaattc atttccaatt
     9361 atattcatat ttattcctgc ttgggaacct aagtcttttc ctgtcatcac atctgcagcg
     9421 tttttaccat ctctaactcc taaatatcta ataccaccct cacagttaat aaacttatta
     9481 ttaataatga aagcatcttt atacttcaag ggagttaatg cataaccttg tatatcttca
     9541 aatatattat ttctaatatg aatattctca tagtaacgat tatgtctact tgcatgtgag
     9601 ccaatagcac gattccaact tcccatttcg ggcaattctg aaggtccaaa ataacaatct
     9661 tcgataatga catttttcgt tatcgtacca tctgtcgttc cgaattttgg aaaagcacca
     9721 ggtacttgaa tgtctaattg tattgcttca gaataaaagc gttcgccact atagtctacg
     9781 aatccttcaa atgaacagtt tttaatatag agtccattaa tcccacaagc atcaattgca
     9841 tgaccactca ctacattctt aatggtcaca cctattaatt gaatatcttc agcatgccca
     9901 atgcacatag ctgtattgtt ataaggatac gatacgccat tcatatcaaa cttgcctcct
     9961 ttaatatgaa tatgactgtg tccattataa ccacgataaa aaccaaagcg atgaccattt
    10021 tttaataaag gaccagaatg acatcgacgt aaaatagttt cattatctaa caaaagtgtt
    10081 gtattgccat atatcgttaa tggtttgcaa atatcatacg tccctttcgg tatataaact
    10141 gtcgttggtt tacatcttcc atgatttaac gcacgttgta ttgctcgagt atctttagtt
    10201 ttgtttatac ctgttaaccc ataatctttc atattgatat acataaatcg tcatcctttg
    10261 tccattttct aattactcat atattaacca attattcaaa ttataatcgt gttaggttga
    10321 tttagcagat agtcataaat ctcgtgatgc catctattag catttttata ttcaaaacat
    10381 catcacttga tattagttct aagtttgtca catttagtat tctattacag ctattttaaa
    10441 actaccgtaa aaacatctta taatatttgt tgattgcgcg atttgctctt ccaaaaaagt
    10501 tgattaatct atatacttaa tctatattta tatattaacc attagggtta aaaattactc
    10561 tagcatttat gaatagatgg gagtttattt tattattata taggagagat gttgaatgac
    10621 acatcgcgca ctattagttg ttgactattc atatgacttt atcgcagacg acggcttact
    10681 aacatgcggt aaacctggac aaaatattga agattttatt gtttctcgta tcaatgactt
    10741 taattattat caagaccata tattcttttt aatggattta cattatttac atgacattca
    10801 tcatcctgaa agtaaattat tcccaccaca caatatcgta gatacaagtg gtagagaatt
    10861 atacggtaaa gtaggtaaat tatacgaaac aattaaagcg caacctaatg tacatttcat
    10921 tgataaaacg cgctatgatt cgttctttgg taccccgctt gatagtttat tgagagaaag
    10981 aagtattaat caagtcgaga tcgttggtgt atgtaccgat atttgtgtgt tacatacagc
    11041 aatttctgca tacaacttag gttataaaat ttcagtacct gctgagggag tggcttcatt
    11101 taatcaaaaa gggcatgaat gggcacttgc acatttcaaa aactcattag gtgcagaggt
    11161 agaacaacac gtttaaatcg tgctaaaata attataaaga atacaatata caagggagat
    11221 atttgacaat ggctaaaaca tatattttcg gacataagaa tccagacact gatgcaattt
    11281 catctgcgat tattatggca gaatttgaac aacttagagg taattcagga gccaaagcat
    11341 accgtttagg tgatgtgagt gcagaaactc aattcgcgtt agatacattt aatgtacctg
    11401 ctccggaatt attaacggat gatttagatg gtcaagatgt tatcttagtt gatcataacg
    11461 aattccaaca aagttctgat acgattgcct ctgctacaat taagcatgta attgatcatc
    11521 acagaattgc aaatttcgaa actgctggtc ctttatgtta tcgtgctgaa ccagttggtt
    11581 gtacagctac aattttatac aaaatgttta gagaacgtgg ctttgaaatt aaacctgaaa
    11641 ttgctggttt aatgttatca gcaattattt cagatagctt acttttcaaa tcaccaacat
    11701 gtacacaaca agatgttaaa gcagctgaag aattaaaaga tattgctaaa gttgatattc
    11761 aaaagtacgg cttagatatg ttaaaagcag gtgcttcaac aactgataaa tcagttgaat
    11821 tcttattaaa catggatgct aaatcattta ctatgggtga ctatgtgact cgtattgcac
    11881 aagttaatgc tgttgacctt gacgaagtgt taaatcgtaa agaagattta gaaaaagaaa
    11941 tgttagctgt aagtgcacaa gaaaaatatg acttatttgt acttgttgtt actgacatca
    12001 ttaatagtga ttctaaaatt ttagttgtag gtgctgaaaa agataaagtt ggcgaagcat
    12061 tcaatgttca attagaagat gacatggcct tcttatctgg tgttgtttct cgaaaaaaac
    12121 aaatcgtacc tcaaatcact gaagcattaa caaaataata ctatattact gtctaattat
    12181 agacatgttg tatttaacta acagttcatt aaagtagaat ttatttcact ttcaatgaac
    12241 tgttttttat ttacgtttga ctaatttaca accttttcaa tagcagtttt cattccttta
    12301 gctatcctaa cccacagatt agtgatttct atacaatttc cctttggtct ttacattttc
    12361 ttaaaatatt tgcgatgttg agtataaatt tttgttttct tcctaccttt ttcgttatga
    12421 ttaaagttat aaatattatt atgtacacga ttcatcgctc tattttcaac tttcagcata
    12481 tataattcga aagaccattt aaaattaacg gccacaacat tcaaatcaat taatcacttt
    12541 ttccaaaata atcatataag gaggttcttt tcattatgaa tatcattgag caaaaatttt
    12601 atgacagtaa agcttttttc aatacacaac aaactaaaga tattagtttt agaaaagagc
    12661 aattaaagaa gttaagcaaa gctattaaat catacgagag cgatatttta gaagcactat
    12721 atacagattt aggaaaaaat aaagtcgaag cttatgctac tgaaattggc ataactttga
    12781 aaagtatcaa aaatgcccgt aaggaactta aaaactggac taaaacaaaa aatgtagaca
    12841 cacctttata tttatttcca acaaaaagct atatcaaaaa agaaccttat ggaacagttt
    12901 tgatcattgc accatttaac tatcctttcc aactagtgtt cgaaccttta attggtgcta
    12961 ttgcagcagg taatacagca attattaaac catctgagtt gacaccaaat gttgcacgag
    13021 tgattaaacg attaatcaat gaaacatttg atgcaaatta cattgaagtt attgagggag
    13081 gaattgaaga aacgcaaacg ttaattcact taccttttga ctatgtcttc tttacaggaa
    13141 gtgaaaatgt aggcaaaatc gtttatcaat ctgccagcga aaatttagtt cctgtgacat
    13201 tagaaatggg cggtaaatct ccagtcatcg ttgatgaaac agcgaatatt aaagttgcca
    13261 gtgaacgcat ttgttttggg aaattcacta atgccggcca aacatgtgtt gcaccagatt
    13321 acattttagt acacgaatct gtaaaagatg atttaatcac agccctatca aaaacgttgc
    13381 gtgaatttta tggtcaaaat atacaacaaa gtccagatta tggccgcatt gtaaacctta
    13441 aacattatca tcgtctgacg tcattactta acagtgcaca aatgaatatt gtatttggtg
    13501 gtcatagtga tgaggatgaa cgttatatag aaccaacatt gttagatcac gttacaagtg
    13561 attcagcaat tatgcaagaa gaaatttttg gtcctatctt accgatttta acgtatcagt
    13621 cattggatga agcaatagcc tttattcacg aaagaccaaa acctttgagt ttatatttat
    13681 ttagcgaaga tgaaaatgct acacaacgtg taataaacga gctatcattt ggcggcggcg
    13741 ctattaatga tacattgatg cacctagcga atcctaaatt accatttggt ggtgttggca
    13801 cctcaggtat gggacgctat catggtaaat attcattcga cacttttaca catgaaaaaa
    13861 gctacatttt caaatctaca cgattagaat caggtgtcca tttaccacta tataaaggta
    13921 aatttaaata catcaaagct ttctttaaaa attaattttt gagacaaaaa taaaccatgc
    13981 ttccataatt tgatgttctt gaaaacaata aatttcaagg tatacacaaa ttttttggaa
    14041 acatggtttt ctttttatca tgattaatta aagattaaaa tatgacacat acaccttcag
    14101 atgctacacg agtgttatca catagcgtaa ttttacctgt ttctttattt ctttcgaaaa
    14161 cagttacaac tgaatctcct tgctcatgag cacaaactaa aaggtcatct gatgaggcaa
    14221 tattaaaatc tcttgggaat tgaccaccac tttcagtaat tgttactagt tctaagtgtt
    14281 gaccattatc aagaacttta aaaattgcaa tgctatcatg ccctctatta gatacatata
    14341 agaattgttg gtcatgagat aaacgcactg ctgcaagttt agtatctcca tcaaagtttt
    14401 caggaattgt taaatgacgc tcgagctctt caaatttacc gtcattatat tctgcaacac
    14461 tcacagtatt tgataattca tgtacgacat aagcaaattt tccattatca tgaaattcaa
    14521 tatgtcttgt cccgtcacta tctttaaata aagattcttt ataaaattca aacccgttgt
    14581 catcaaattt ataagtaacg atacgatcag cacctaaatc tgttactgca acgtacttac
    14641 catctggagt ttgattaata taatgtgcgt gtggatgatc ttgtctttca tgtgtacctg
    14701 ttggaaaatc atgcgcaagt tcttgaatta gacgtataat ttcacctgtg tgcgtattta
    14761 attcatacat acgtatgatg ccagcaccat ataccgcttc aaataaatat cgtttatctc
    14821 ctgaaatcga tacataacaa cctgtaccag cttttgaaga caaacattta tttaataaat
    14881 gcaattcacc attgtcatca attttcaaac tcgcaacacc gcattgttct ccttctttat
    14941 tgattccata taaaacttcg ttattacgca ccaaatatgt agacgcttct aattcaaatc
    15001 ctgtttctaa taaatcaata cgtgactgat tttcgtttaa ttcaaaacga taaatccctt
    15061 taccattctt tttagtgtaa gaaccaatat atccatttgt cattactttt acccctccat
    15121 gttagtctta ttttcatttt attaaatttt agctagaatt aacaatcatt tatcatttcc
    15181 ttaaagctaa aactgtttaa ctactttaaa agaactattt gctggtgata tgtcattatt
    15241 cgattttaat taatccctct tttttactta cacgagcatt cattattaac gcgtttatgc
    15301 ttccacaaaa tttctgttgc aaaatagaac acatgttcgt ataatgtaat tatcagattg
    15361 gagtgaatta aggatgacaa gttatgaaga agaaactgat tatcgtaacg ttccaagaga
    15421 attactagat aacaatatac ctatgggaag aggcatgatt aaatgggctc cttttgcaac
    15481 attacccgaa caattcgaaa cgattcaaca atacattatc gaccaaaaca aaattacacg
    15541 tcctgtatta tcagatgatc aattggctga gctaaacatt cggctacacg aggcgctaca
    15601 atatgcccaa cctgtagaag ttaaatttta taataatggc tttgtagatt cagtacgctt
    15661 aaccatttat cgtattgatg ctattaatta tgaaattgat ggttatgttt acaatcagca
    15721 acaacgtcaa aaaatttcta tctttgatat cttagatatt gtcttgttac cttaatgctt
    15781 tgaacataat taaaggcaag aacaatctat attgtccttg cctaaatgtt attagttatt
    15841 tttactttcg atatcagaaa taatttcttt agtttttctt tcaatatctt caaaatcttt
    15901 tttaaagata taagcaaatg ctactagacc aacaccagca actaatgttg taatagcaac
    15961 taagctaaat acgaatttaa acacacattt aataaaattc cacatctcaa tttcacctct
    16021 gttaaattaa atacctatct acatttcatt atactatcat atatagaata atcattaaat
    16081 aaatacccaa ttttacgaaa tatattcatc aaattatata gcgagcaagc taatgattat
    16141 tttcaaaaat gccgaggaac ctctgtttca acgtgacatg accttatatg ctaatgttaa
    16201 caatgactat tatcgtgaat gctaacttaa gattgttatt tatgataaga tgattttaag
    16261 tttttaactt aatatcccca ccatctataa aaatatgttt taactgattg ataagtctta
    16321 tacaccgaga aatcacctca aacaatttta tatttcattt agtaaaatat aactttattt
    16381 aacatgacat tcaatataca tacgattact atttatttac aatatattac aactaaaaag
    16441 aaaggggccg atgatatgca acaagtgaca tcagatatta tgacttttag aggttcacat
    16501 ttcgagttag gtgttaaaac tggtaaatgg cttcaacaaa cacctcttct aaaaaatcga
    16561 gaaaaagaat ggaaaaaacg tgtcccacgt ttcgatatag atgtaaatga aacttatcaa
    16621 atattccaaa cttacgcacc tcaaatatgg gaagaattaa tgggactaca aagtatactc
    16681 aaaatgccaa cacgccaaat tattttaaac tttggacatt atcgttttac cgatttaaaa
    16741 gaaagtggtt gcacggtctt tcaaggcaaa gacttcatgg ttagaaatta tgattatcac
    16801 cctgcaactt atgatggtcg ctacttacta tatcaaccta cagatagcgg tttagctcaa
    16861 attggtcctg tatcaagggt aactggaaga atggatggta tgaatgagtc aggattaact
    16921 atgggctata actttatgca ccggaagaaa ccagcaaatg gttttgtatg ttatatgatt
    16981 ggtcgtctaa ttcttgaaaa ttgccaaaat gtaacagaag caatccaatt attgaaagaa
    17041 ataccacaca gaagctcatt tagctacata ctgatggaca aatcattgaa ccatgcaatt
    17101 gttgaagtga cgccgagatc aatagatgtt cgttatgata atatatgtac aaatcatttt
    17161 gaaatattat cacatgaaaa tcgcaattat acaaaagaat ctaaagaaag actagcgcgt
    17221 accatttcac aaactaataa taatttagat atgactacag catttaagtt attcaataat
    17281 cctcagtatg aaatttacag taaactattc aaaagctggt ctggcaccat ccatacatca
    17341 atgtatcacc ctgaaacatt aactgcatat tttacattgg gagaaaatgc gccaccagaa
    17401 ataatagatt tcaaatcatg gttagatggt caagacctta atatcactca ctttactggc
    17461 aatatagata ccgacttaac ttttgccaac aaataaataa caccgatatt agagaaatta
    17521 tgcttcctaa tatcggtgct tacatccttt atttattcaa ctttgatatt accatcaatc
    17581 gtataaaatt ctaaaacatt gtcgcttttc ccaactttac cattagtaaa tgttttattt
    17641 ttaactacgc tatcacccgt tcccggattt agctttagta tagtatcttc aggtttacta
    17701 tcatacttaa aacgaatatc tccttgttta gtagaagctt ttgcatctac ttttgatggc
    17761 atgtttttaa attcaatgtc accatgatcg tttaaaaata tggattgttt aatttgactc
    17821 ttgtcgattt gtagcgtacc aataacaact ttaatattac tatttttaat gttactttta
    17881 ctaatataag taggactatt atttgtcttt gaatctagtg cgtcaagatt tgagttttta
    17941 ataactactt caccgttaat gctttgaata cttgtgttct ctaaatcaac atcactgatt
    18001 ctaacacttc ctgctccaga cgatatattt aaacgtttaa tcattttatc aggcatttca
    18061 atcgttaacg ttttcttatt ctcatgaaaa ggattcatat caattgcata tcctcttgtc
    18121 ttagaccttt tatcactaac cttcaacgtc ttatctacta tattaattaa tatatcattg
    18181 tcaccatcat atttaactct aaattgattc ccccgtttta tacgaagttc tgtactatcc
    18241 aaatttatag atacattgtc aaaagcatcg tctttgaatg ttttatcata ttgtttagta
    18301 ccatatttgt ttttatcata gctgaaccaa ataatggttg ctgctgtaaa aaagacaaca
    18361 aacactaaaa gcccaataaa aaagaatttc ttcattttct aacgcttcct ttgacagttt
    18421 taatatacca aagtaaatat tttaagatta aacgataaat gtattctaaa atcttaaata
    18481 tgacaatgat aaatactaat cctaaccctg aatatgatat ggcaaaaaat acattactaa
    18541 ttgagtctac aattcctctg gatattgctg atgctaataa aataattgga caaaacagca
    18601 gcaaaagtga tattaaaaat aatgctaata caaataatcc aactatagat actggtataa
    18661 ggatgacaaa aatagataga atgcctaaac ttaatgaagc agcaacagct cttgaaatat
    18721 tttcaaatgt tggtttagat tcagcataat caataacact tctagctttt gtttcagctg
    18781 caacgtcttg tgggtctttt aacttcttta aaatttcctc ttcatcaacg ccattaagtt
    18841 cttgctcata aaaataacgt tcatattcat acattttttg atctcttaaa tgcctaggta
    18901 gcgcatcaag tgctgtttct aattcattta aataagtaat cttgttcata taggtcactc
    18961 atcccaataa aattattcat tcgtttttta taactttaag acctaaaact atttactaaa
    19021 aaattcaata cgcttaattt ctaaatcttg ataaagtaag tttaatttta aatggttatc
    19081 tctatcaata tactttaccg atgagaaatc attgccaact tttgttcttt tatatccgaa
    19141 tccaagattt tcaatcgcat tatttattgg cgaaccaatt cccccatcaa aattagtatg
    19201 tatcttttca tctcttacta atattatccc cttaacgatg ttatcctttt ctctcacttt
    19261 aacggtaagg tcaggatgag ctttactgtt ataaaattta aaacgatcaa acttaatttt
    19321 tttatttact tcatagcctt ttttatcaaa cttctcattt aatttaatat cgtttatttc
    19381 aagattagac aaatccacag ttttcgtatg acgatattga tataaaccaa ttaatacacc
    19441 aaaagaacag attaaaaata atataaacac aacccagcga ttttgaatac gcactgatgt
    19501 caccctttct ttgtacttat ttaaatatag cataaggtgc ttcccgtttc atccttaaca
    19561 aaaattaaca aagaatttgc aattaattta tttcattacc ttttattact ataaattggt
    19621 ataatgttgt aaatgctaaa ggaggttttt acaatgacaa atttagaaac ttatttcaaa
    19681 aatagccaac ccttaaatga atacattgat ggaatgaaga caaatcaaga taccgttctc
    19741 agtatctatc aatcatttga gttaccagaa gatgattcac gcatcaaaaa aataaaagag
    19801 atgaattatt ctaaaatatt agtaattact gaagactggt gtggagatgc aatgatgaat
    19861 ctcccaattc taaaacacat cagtgaagca ttaaatttag aagtacgcgt gttccataga
    19921 gatgatgata caaaactgat cgatcaatat ttaacaaatg gtaaatcacg tgcaattcct
    19981 atcttcgtat tcttgaatga tcaattcgaa caagaaacag tttggggacc aagagcaaat
    20041 gaagtccaaa aatttgtaac tgatgttcgt gctgataaat taccgagcaa agatcatcca
    20101 gactatgcag atttagaaaa agaaacacac ttagttatat caaaccgcta taaaactgac
    20161 gcttcatttt ggaaagcagt ttataattcc atcct
//
LOCUS       DALMNS010000049        20159 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.049, whole genome shotgun sequence.
ACCESSION   DALMNS010000049 DALMNS010000000
VERSION     DALMNS010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20159)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20159)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20159
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.049"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            237..539
                     /gene="gatC"
                     /locus_tag="O6Y56_001449"
     CDS             237..539
                     /gene="gatC"
                     /locus_tag="O6Y56_001449"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HDB5574704.1"
                     /translation="MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDS
                     ADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA"
     gene            541..1998
                     /gene="gatA"
                     /locus_tag="O6Y56_001450"
     CDS             541..1998
                     /gene="gatA"
                     /locus_tag="O6Y56_001450"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HDB5574705.1"
                     /translation="MSIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFL
                     ALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPI
                     YESTVMEKLHNENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAA
                     AVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTR
                     NVKDNAIVLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDV
                     KEAVQNAVETLKSLGAVVEEVSLPNTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSK
                     EAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKV
                     FENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQSNGRP
                     IGLQFIGKPFDEKTLYRVAYQYETQYNLHDVYEKL"
     gene            2011..3438
                     /gene="gatB"
                     /locus_tag="O6Y56_001451"
     CDS             2011..3438
                     /gene="gatB"
                     /locus_tag="O6Y56_001451"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HDB5574706.1"
                     /translation="MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAY
                     PGVLPVVNKRAVDWAMRAAMALNMEIATESKFDRKNYFYPDNPKAYQISQFDQPIGEN
                     GYIDIEVDGETKRIGITRLHMEEDAGKSTHKGEYSLVDLNRQGTPLIEIVSEPDIRSP
                     KEAYAYLEKLRSIIQYTGVSDVKMEEGSLRCDANISLRPYGQEKFGTKAELKNLNSFN
                     YVRKGLEYEEKRQEEELLNGGEIGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIV
                     PLYIDDAWKERVRQTIPELPDERKAKYVNELGLPAYDAHVLTLTKEMSDFFESTIEHG
                     ADVKLTSNWLMGGVNEYLNKNQVELLDTKLTPENLAGMIKLIEDGTMSSKIAKKVFPE
                     LAAKGGNAKQIMEDNGLVQISDEATLLKFVNEALDNNEQSVEDYKNGKGKAMGFLVGQ
                     IMKASKGQANPQLVNQLLKQELDKR"
     gene            3478..3624
                     /locus_tag="O6Y56_001452"
     CDS             3478..3624
                     /locus_tag="O6Y56_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574707.1"
                     /translation="MIADLDAIEGLFISIEVILLLTLFIVHVNGKNINFINALALIIL
                     RQTV"
     gene            4205..5152
                     /locus_tag="O6Y56_001453"
     CDS             4205..5152
                     /locus_tag="O6Y56_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDB5574708.1"
                     /translation="MRKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKI
                     GDATLEAERAMHENYDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMGTVNDFGRAL
                     HIPNDIMGALDVIIEGHSTKVDIGKMNNRYFINLAAGGQLTQVSYETPSKLKSIVGPF
                     AYYIKGFEMLPQMKAVDLRIEYDGNVFQGEALLFFLGLTNSMAGFEKLVPDAKLDDGY
                     FTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSFTDLQLNVDGEYGG
                     KLPANFLNLERHIDVFAPNDIVNEELINNDHVDDNLIEE"
     gene            5233..6594
                     /gene="rlmD"
                     /locus_tag="O6Y56_001454"
     CDS             5233..6594
                     /gene="rlmD"
                     /locus_tag="O6Y56_001454"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HDB5574709.1"
                     /translation="MQAIAKNDIKTGTVVDLTHEGHGVVKIDRFPIFIPQALINEQIE
                     YKIIKVKKNFAIGKLLNINTRSENRVAPPCIYYERCGGCQLQHLSYEAQLEMKKEQVI
                     NLFQRKAHFDNSKINDTVGMTDPWRYRNKSQIPVGKNEQNEVIMGFYRQRSHDIIDME
                     SCLIQDSQHQEVMNEVKSILKDLNVSIYQEQLKKGLMRHLVVRTGYHTDEMMIIFVTN
                     GKKWPQKNAVVEKILDAFPNVTSIKQNINDSHSNVIMGRQSITLYGKDTIIDQLTDST
                     FKISDQSFYQINSEQTEKLYNKAIEYAQLTGNEVVLDTYCGIGTIGLYMAPHAKHVYG
                     VEVVPSAIEDAQQNATINQCNNTTFVCGKAEEVILQWKAQGIKPDVVMVDPPRKGCDE
                     TFIQTLLTLEPKRIVYISCNPATQQRDALLLAEKYQLEEVTPVDMFPQTTHVETVALF
                     NLK"
     gene            6764..7294
                     /locus_tag="O6Y56_001455"
     CDS             6764..7294
                     /locus_tag="O6Y56_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HDB5574710.1"
                     /translation="MHKIDLTTNNFQMRRFIILQLVIALFVILFTYKWALGVTAVVDQ
                     NIIINLVYGFAGFIILLILHELIHRALFLLFKKDSKPMFNIKKDRILFQTADAYFNKW
                     QFSIIMLSPLILLSTGLLILIKVFGYSSLIFMFSMHTAYCFIDILLVALTISSSFKYV
                     QQDEDSIYLYHQKPTQ"
     gene            7541..8611
                     /gene="dinB"
                     /locus_tag="O6Y56_001456"
     CDS             7541..8611
                     /gene="dinB"
                     /locus_tag="O6Y56_001456"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011302771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HDB5574711.1"
                     /translation="MTERRIIHIDMDYFFAQVEMRDNPKLKGKPVIVGGKASSRGVVS
                     TASYEARKYGVHSAMPMSQAHKLCPNGYFVTSNFGAYRETSAQIMSIFRSYTDKVEPM
                     SLDEAYLDITELVRPDLPASKIAQYIRKDILEQTHLTASAGVSYNKFLAKLASGMNKP
                     DGMTVIDYQNVHDILMTLDIGDFPGVGKASKKVMHDNGIFNGRDLYEKTEFELIRLFG
                     KRGRGLYNKARGIDHSEVKSSRVRKSVGTERTFATDVNDDEEILRKVWELSGKTAERL
                     NKLQKSAKTVTVKIKTYQFETLSKQMSLRDSVSSEEDIYNIAYLLYNDLKDPDVPIRL
                     IGVTVGNLEQSTYKNMTIYDFI"
     gene            complement(8678..9232)
                     /locus_tag="O6Y56_001457"
     CDS             complement(8678..9232)
                     /locus_tag="O6Y56_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDB5574712.1"
                     /translation="MIQDAFVALDFETANGKRTSICSVGMVKVIDSQITETFHTLVNP
                     QDYFSQQNIKVHGIQPEDVENAPTFDYVFPYMMQFIADLPVVAHNAAFDMNVLHQSIQ
                     NIGLPTPNLTYFCSYQLAKRTVDSYRYGLKHMMEFYQLDFHGHHDALNDAKACAMITF
                     RLLKNYENLTYVTNIYGKNLKDKG"
     gene            9449..9541
                     /locus_tag="O6Y56_001458"
     CDS             9449..9541
                     /locus_tag="O6Y56_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574713.1"
                     /translation="MTKNTIISLENEKTQINDSENESSDLRKAK"
     gene            complement(9623..10123)
                     /gene="ftnA"
                     /locus_tag="O6Y56_001459"
     CDS             complement(9623..10123)
                     /gene="ftnA"
                     /locus_tag="O6Y56_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H-type ferritin FtnA"
                     /protein_id="HDB5574714.1"
                     /translation="MLSKNLLEALNDQMNHEYFAAHAYMAMAAYCDKESYEGFANFFI
                     QQAKEERFHGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFY
                     NLSEIARQDKDYATISFLNWFLDEQVEEESMFETHINYLTRIGDDSNALYLYEKELGA
                     RTFDEE"
     gene            10415..11728
                     /gene="murT"
                     /locus_tag="O6Y56_001460"
     CDS             10415..11728
                     /gene="murT"
                     /locus_tag="O6Y56_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II isoglutaminyl synthase subunit MurT"
                     /protein_id="HDB5574715.1"
                     /translation="MRQWTAIHLAKLARKASRAVGKRGTDLPGQIARKVDTDILRKLA
                     EQVDDIVFISGTNGKTTTSNLIGHTLKANNIQIIHNNEGANMAAGITSAFIMQSTPKT
                     KIAVIEIDEGSIPRVLKEVTPSMMVFTNFFRDQMDRFGEIDIMVNNIAETISNKGIKL
                     LLNADDPFVSRLKIASDTIVYYGMKAHAHEFEQSTMNESRYCPNCGRLLQYDYIHYNQ
                     IGHYHCQCGFKREQAKYEISSFDVAPFLHLNINDEKYDMKIAGDFNAYNALAAYTVLR
                     ELGLNEQAIKNGFETYTSDNGRMQYFKKERKEAMINLAKNPAGMNASLSVGEQLEGEK
                     VYVISLNDNAADGRDTSWIYDADFEKLSKQQIEAIIVTGTRAEELQLRLKLAEVEVPI
                     IVERDIYKATAKTMDYKGFTVAIPNYTSLAPMLEQLNRSFEGGQS"
     gene            11730..12461
                     /locus_tag="O6Y56_001461"
     CDS             11730..12461
                     /locus_tag="O6Y56_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HDB5574716.1"
                     /translation="MHELTIYHFMSDKLNLYSDIGNIIALRQRAKKRNIKVNVVEINE
                     TEGITFDECDIFFIGGGSDREQALATKELSKIKTPLKEAIEDGMPGLTICGGYQFLGK
                     KYITPDGTELEGLGILDFYTESKTNRLTGDIVIESDTFGTIVGFENHGGRTYHNFGTL
                     GHVTFGYGNNDEDKKEGIHYKNLLGTYLHGPILPKNYEITDYLLEKACERKGIPFEPK
                     EIDNEAEKQAKQVLIDRANRQKKSR"
     gene            12547..12657
                     /locus_tag="O6Y56_001462"
     CDS             12547..12657
                     /locus_tag="O6Y56_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574717.1"
                     /translation="MDGNNQIDVCFFVLVNNYYTMSIYPRIINSNGDYAT"
     gene            12686..13099
                     /locus_tag="O6Y56_001463"
     CDS             12686..13099
                     /locus_tag="O6Y56_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574718.1"
                     /translation="MKPTKVILRDASYVHSKTSITFILKDVVIEEDNKIYYFDTSATF
                     EDQEIKFEFALFDSDMDNLKHMEYDNPVTEIYFIEPDLHFTIIDFNQELLCIYIDFDS
                     GLRHSNMATESGISLRINVTKSDFNKFINELASLH"
     gene            complement(13532..14518)
                     /locus_tag="O6Y56_001464"
     CDS             complement(13532..14518)
                     /locus_tag="O6Y56_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HDB5574719.1"
                     /translation="MNDQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVV
                     TIEPTAKASLIKGYRRLPATVIGAGFAVLFTYLFGDQSPFTYALSATFTILFCTKLKL
                     QVGTNVAVLTSLAMIPGIHDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEE
                     KLSKTDALMYKLFYDRCQELILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYH
                     KKKECDWKLLNQLTKRAYTNRLFITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKD
                     IFYDGSFKREDDSVETLRSTIKAHEISGENQIKSHILYEVLMIYRLLDSRYA"
     gene            15047..15805
                     /gene="map"
                     /locus_tag="O6Y56_001465"
     CDS             15047..15805
                     /gene="map"
                     /locus_tag="O6Y56_001465"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDB5574720.1"
                     /translation="MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAK
                     ELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYY
                     ADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLK
                     VIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNE
                     WAFETSDKSFVAQIEHTVIVTKDGPILTTKIEEE"
     gene            16022..16408
                     /locus_tag="O6Y56_001466"
     CDS             16022..16408
                     /locus_tag="O6Y56_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574721.1"
                     /translation="MNYVERYIEQFLRATVRNNIKHYLLMLDEKMKNLDDYMRYLITK
                     KEQLSKLIDSLMLTLENKYIDIAEAFQIQCAREINNQEIENIKSELNKVEAYYAQIET
                     QIQQTSTEKIATEKTSYLINYMNAVA"
     gene            16423..17124
                     /locus_tag="O6Y56_001467"
     CDS             16423..17124
                     /locus_tag="O6Y56_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall-active antibiotics response protein"
                     /protein_id="HDB5574722.1"
                     /translation="MTHKYISTQMLIIFTALMIIANFYYIFFEKIGFLLVLLLGCVLV
                     YVGYLYFHKIRGLLAFWIGALLIAFTLLSNKYTIIILFVFLLLLIVRYLIHKFKPKKV
                     VATDEVMTSPSFIKQKWFGEQRTPVYVYKWEDVQIQHGIGDLHIDLTKAANIKENNTI
                     VVRHILGKVQVILPVNYNINLHVAAFYGSTYVNEKSYKVENNNIHIEEMMKPDNYTVN
                     IYVSTFIGDVEVIYR"
     gene            17121..18164
                     /locus_tag="O6Y56_001468"
     CDS             17121..18164
                     /locus_tag="O6Y56_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDB5574723.1"
                     /translation="MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIF
                     GIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKTQIERSMEGETVGINDQNIEIYS
                     ETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
                     QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLG
                     EGIKDLVIDLQKKVPMKVVHEIQDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVE
                     LFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGATFHIVSLPDSGTRIE
                     VKAPLNKEDSYDD"
     gene            18154..18783
                     /gene="vraR"
                     /locus_tag="O6Y56_001469"
     CDS             18154..18783
                     /gene="vraR"
                     /locus_tag="O6Y56_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator VraR"
                     /protein_id="HDB5574724.1"
                     /translation="MTIKVLFVDDHEMVRIGISSYLSTQRDIEVVGEGASGKEAIAKA
                     HELKPDLILMDLLMEDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSY
                     ILKTTSAKDIADAVRKTSRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIA
                     KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ"
     gene            complement(18896..20113)
                     /locus_tag="O6Y56_001470"
     CDS             complement(18896..20113)
                     /locus_tag="O6Y56_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HDB5574725.1"
                     /translation="MSKKDHSSSKYLNSVKEAQEESKKKNKSNPKIDVDRTYIEPQQF
                     QSKKPKKEDQVFFLSRLNKPAKYKKDSNFLSYLIYRIGKDDASGLAAQMTYHFVLAMF
                     PMLLFLLTLLPFFNIKQSQITNMLSNAPAETSTLIKSVIGDITQNSSGGLLSIGLILA
                     IWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLSVVFTVVMGVVFVVALALPTLGSVI
                     SHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLYSVAPNVKTKLKSVLPGAVFT
                     SIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAEINAIIHQR
                     SVIKGKTPEEAALEHDDNNKNHYNENTRYEYAEDTNATHQRTYHVDEHPSDTYPEDDK
                     NIKDKIVDKLKKD"
BASE COUNT         7244 a         2884 c         3672 g         6359 t
ORIGIN      
        1 ctttagtatt ttttggatat gggcaaattt ttataattaa aattgcataa tcataatatt
       61 gaattgggtt gtctaatatt aaagggtgtt gttttcataa aaaaataatt tggtaaacga
      121 atgataatgt ttatatagtt tatatgaaat taaagtagca cctcataaat acttagattt
      181 ttaattggaa atttgataca atttagtgat gaatgactta aaggaggctt ttattaatga
      241 caaaagtaac acgtgaagaa gttgagcata tcgcgaatct tgcaagactt caaatttctc
      301 ctgaagaaac ggaagaaatg gccaacacat tagaaagcat tttagatttt gcaaaacaaa
      361 atgatagcgc tgatacagaa ggcgttgaac ctacatatca cgttttagat ttacaaaacg
      421 ttttacgtga agataaagca attaaaggta ttccgcaaga attagctttg aaaaatgcca
      481 aagaaacaga agatggacaa tttaaagtgc ctacaatcat gaatgaggag gacgcgtaag
      541 atgagcattc gctacgaatc ggttgagaat ttattaactt taataaaaga caaaaaaatc
      601 aaaccatctg atgttgttaa agatatatat gatgcaattg aagagactga tccaacaatt
      661 aagtcttttc tagcgctgga taaagaaaat gcaattaaaa aagcgcaaga attggatgaa
      721 ttacaagcaa aagaccaaat ggatggcaaa ttatttggta ttccaatggg tataaaagat
      781 aacattatta caaacggatt agaaacaaca tgtgcaagta aaatgttaga aggatttgtg
      841 ccaatttacg aatctactgt aatggaaaaa ctacataatg agaatgccgt tttaatcggt
      901 aaattaaata tggatgagtt tgcaatgggt ggttcaacag aaacatctta tttcaaaaaa
      961 acagttaacc catttgacca taaagcagta ccaggtggtt catcaggtgg atctgcagca
     1021 gcagttgcag ctggcttagt accatttagc ttaggttcag acacaggtgg ttcaattaga
     1081 caaccggctg catattgtgg cgttgtcggt atgaaaccaa catacggtcg tgtatctcga
     1141 tttggattag tagcttttgc atcttcatta gaccaaattg gtccattgac tcgaaatgta
     1201 aaagataatg caatcgtatt agaagctatt tctggtgcag atgttaatga ctctacaagt
     1261 gcacctgttg atgatgtaga ctttacatct gaaattggta aagatattaa aggattaaaa
     1321 gttgcattac ctaaagaata cttaggtgaa ggtgtagctg atgatgtaaa agaagcagtt
     1381 caaaacgctg tagaaacttt aaaatcttta ggtgctgtcg ttgaggaagt atcattgcca
     1441 aatactaaat ttggtattcc atcatattac gtgattgcat catcagaagc ttcgtcaaac
     1501 ctttctcgtt ttgacggtat tcgttatggt tatcattcta aagaagctca ttcattagaa
     1561 gaattatata aaatgtcaag atctgaaggt ttcggtaaag aagtaaaacg tcgtattttc
     1621 ttaggtacat ttgcattaag ttcaggttac tacgatgctt actataaaaa atctcaaaaa
     1681 gttagaacat tgattaaaaa tgactttgat aaagtattcg aaaattatga tgtagtagtt
     1741 ggtccaacag cgcctacaac tgcgtttaat ttaggtgaag aaattgatga tccattaaca
     1801 atgtatgcca atgatttatt aacaacacca gtaaacttag ctggattacc tggtatttct
     1861 gttccttgtg gacaatcaaa tggccgacca atcggtttac agttcattgg taaaccattc
     1921 gatgaaaaaa cgttatatcg tgtcgcttat caatatgaaa cacaatacaa tttacatgac
     1981 gtttatgaaa aattataagg agtggaaatc atgcattttg aaacagttat aggacttgaa
     2041 gttcacgtag agttaaaaac ggactcaaaa atgttttctc catcaccagc gcattttgga
     2101 gcagaaccta actcaaatac aaatgttatc gacttagcat atccaggtgt cttaccagtt
     2161 gttaataagc gtgcagtaga ctgggcaatg cgtgctgcaa tggcactaaa tatggaaatc
     2221 gcaacagaat ctaagtttga ccgtaagaac tatttctatc cagataatcc aaaggcgtat
     2281 caaatttctc aatttgatca accaattggt gaaaatggat atatcgatat cgaagtcgac
     2341 ggtgaaacaa aacgaatcgg tattactcgt cttcacatgg aagaagatgc tggtaagtca
     2401 acacataaag gtgagtattc attagttgac ttgaaccgtc aaggtacacc gctaattgaa
     2461 atcgtatctg aaccagatat tcgttcacct aaagaagcat atgcatattt agaaaaatta
     2521 cgttcaatta ttcaatacac tggtgtatca gacgttaaga tggaagaagg atctttacgt
     2581 tgtgatgcta acatctcttt gcgtccatat ggtcaagaaa aatttggtac taaagccgaa
     2641 ttgaaaaact taaactcatt taactatgta cgtaaaggtt tagaatatga agaaaaacgc
     2701 caagaagaag aattgttaaa tggtggagaa atcggacaag aaacacgtcg atttgatgaa
     2761 tctacaggta aaacaatttt aatgcgtgtt aaagaaggtt ctgatgatta ccgttacttc
     2821 ccagagcctg acattgtacc tttatatatt gatgatgctt ggaaagagcg tgttcgtcag
     2881 acaattcctg aattaccaga tgagcgtaaa gctaagtatg taaatgaatt aggtttacct
     2941 gcatacgatg cacacgtatt aacattgact aaagaaatgt cagatttctt tgaatcaaca
     3001 attgaacacg gtgcagatgt taaattgaca tctaactggt taatgggtgg cgtaaacgaa
     3061 tatttaaata aaaatcaagt agaattatta gatactaaat taacaccaga aaatttagca
     3121 ggtatgatta aacttatcga agacggaaca atgagcagta aaattgcgaa gaaagtcttc
     3181 ccagagttag cagctaaagg tggtaatgct aaacagatta tggaagataa tggcttagtt
     3241 caaatttctg atgaagcaac acttctaaaa tttgtaaatg aagcattaga caataacgaa
     3301 caatcagttg aagattacaa aaatggtaaa ggcaaagcta tgggcttctt agttggtcaa
     3361 attatgaaag cgtctaaagg tcaagctaat ccacaattag taaatcaact tttaaaacaa
     3421 gaattagata aaagataatt ttaatcatca aacgatgaag atttaaaaat taaacccttg
     3481 attgctgact tagatgcaat cgagggttta tttatatcta tagaagtcat attactttta
     3541 actttattca ttgtacatgt taatggtaaa aatattaatt ttattaatgc gttagcttta
     3601 attatattaa ggcaaactgt ataataaaaa ggtataaaac atttttgtat aaagacaaca
     3661 ttatatttac aacatcattt taaaggtaaa atagcataat tgacgaagtc tatataacga
     3721 agaacggcaa aaatgctgaa taaataacaa cctttgtaca tattgagata gtatttgttt
     3781 aagatacaag ttggtcttta acgatattaa gaatgatgaa ataagactga gcctgggtca
     3841 taaattcaat gtcctaggca ctacaatgtt atattggcag tagttgactg aaagaaaata
     3901 cgcttgtaac aagctttttt caattagatt cgggccccaa catagaagct gactttctgt
     3961 cagcttacaa taatgtgcaa gttggcgggg ccccaacata gaagctgact ttctgtcagc
     4021 ttacaataat gtgcaagttg gggtggggcc ctcaacaaag agaatttcga aaggaaattc
     4081 tacagacaat gcaagttggg gtagagcgaa ataaattttg ttaaatatta tttctgtccc
     4141 actccctagt agacgaaacc aagatgaagt taaaatatat gaattttaag tagagggata
     4201 agatatgagg aaacgtgcta gaatcattta taacccgaca tcaggtaaag agcaatttaa
     4261 aagagaatta cctgatgcct taataaaatt agaaaaagcg ggatatgaaa cgagtgcata
     4321 tgcaaccgag aaaatcggtg atgccacact tgaagcagaa agagctatgc atgaaaatta
     4381 tgatgtatta atcgctgcag gtggtgacgg aacattaaat gaagtagtta atggtatcgc
     4441 agaaaagcct aatcgtccta agctaggtgt cattcctatg ggtactgtta atgactttgg
     4501 acgtgcattg catataccta atgacatcat gggggcactt gatgtcatca ttgaaggtca
     4561 ttctactaaa gtagatattg gtaaaatgaa taatcgatac tttattaatt tagctgcagg
     4621 cggacaattg acgcaggtct cttatgaaac accgagtaaa ttgaaatcta ttgttggtcc
     4681 atttgcttat tacatcaaag gtttcgaaat gttacctcaa atgaaagctg tagatttaag
     4741 aattgaatat gatggtaatg ttttccaagg agaagcatta ttattctttt taggtttaac
     4801 aaattcaatg gcaggatttg aaaaattagt gccggacgct aagttagatg acggctattt
     4861 tacgttaatt atagttgaaa aatcaaacct tgcagaactt ggtcatatta tgactttagc
     4921 ttcaagagga gaacatacta agcatcctaa agttatttat gaaaaagcaa aggcaattaa
     4981 tatttcatca ttcacagact tacaactaaa tgtagatgga gaatatggtg gtaaattacc
     5041 agcgaatttc ttgaatctag aacgtcatat agatgtcttt gcacctaatg atattgtaaa
     5101 tgaagagtta ataaataatg atcatgttga tgacaattta atcgaagaat aaacagaagt
     5161 agtgaaatat ataatggcag gttaggaagc gcataatttt gttcctaacc tgttcctttt
     5221 ggaggtaaaa ttttgcaagc aatagctaaa aatgacatta aaacgggaac agttgttgat
     5281 ttaacgcatg aaggccatgg tgtcgtaaaa atagatcgct ttcctatttt cataccacaa
     5341 gctttaatta atgaacaaat tgaatataaa attatcaaag taaaaaagaa ctttgcgata
     5401 ggtaagttgc ttaatataaa tacgagaagt gagaatcgtg ttgcaccgcc atgtatatat
     5461 tatgaacgtt gtggtgggtg ccaacttcaa cacttatcat acgaagcaca acttgaaatg
     5521 aaaaaggaac aagtgattaa tttgtttcag cgaaaagcgc attttgataa ttctaagatt
     5581 aacgatacag ttggcatgac agatccttgg agatatcgaa acaagtccca gattccagtt
     5641 ggtaagaatg aacagaatga agttattatg ggcttttatc gtcaaagaag ccatgacatt
     5701 attgacatgg aaagttgttt aatacaagat tcacaacatc aagaagtgat gaatgaagtt
     5761 aaatctattt taaaagattt aaatgtaagt atttatcaag aacaattgaa aaaaggttta
     5821 atgagacatt tggttgtaag aacaggatat catacagacg aaatgatgat tatttttgta
     5881 actaatggta aaaagtggcc acaaaaaaat gctgttgttg agaagatatt agatgcattt
     5941 cctaatgtga caagcattaa acaaaacatt aatgatagcc actctaatgt tattatggga
     6001 cgtcagtcta taacgctata tggtaaagat acaattattg atcaattaac agatagtaca
     6061 tttaaaataa gtgatcagtc attctaccaa attaattctg aacaaacaga gaaattatat
     6121 aataaagcaa ttgagtatgc gcaattgaca ggtaatgaag ttgtattaga tacctattgt
     6181 ggtattggaa caatagggct atatatggca ccacatgcaa aacatgtata cggtgttgaa
     6241 gtagtacctt ctgcaattga agacgcacaa caaaatgcga ctataaacca atgcaataat
     6301 acaacttttg tctgtgggaa agctgaagaa gttattttac aatggaaagc acaagggatt
     6361 aaaccagatg ttgtaatggt tgatccgcca agaaagggct gtgacgaaac gtttattcag
     6421 actttgctta cattagaacc taagcgtatt gtctatattt catgtaatcc cgcaacacag
     6481 caacgtgatg cattattatt agctgaaaaa tatcaacttg aagaggtaac accggtagat
     6541 atgtttccac aaacaacaca tgttgagaca gtggcattat tcaatttgaa atagcgcaca
     6601 tgatttgaga taaaatttcg ccttaataag tgaagaaaga agtcgtatat taaaatttta
     6661 ttacagccaa tttactttct tgatatgaac tttttaaatt aaatgtgaca ttgtatacta
     6721 tatttaaaga agaataagaa tgtcatgatc gggagggttg gcaatgcata aaattgattt
     6781 aacgacaaat aattttcaaa tgcgaaggtt tattatcttg caacttgtta ttgcgttatt
     6841 cgtgatttta tttacgtata agtgggcgtt aggtgtcaca gcggttgtcg atcaaaatat
     6901 catcatcaat cttgtatatg ggtttgctgg attcattatt ttattgattt tacatgaact
     6961 tatccataga gcattatttc ttttatttaa aaaagatagc aaacctatgt ttaatataaa
     7021 aaaagacaga atcttattcc aaacagcaga tgcttacttc aacaaatggc aattctcaat
     7081 tattatgctg tcaccactaa tcctattaag tactggcttg cttattttaa ttaaggtatt
     7141 tggttattca tcacttattt ttatgtttag tatgcatacc gcttattgct ttatagatat
     7201 tttgcttgtt gcattaacaa tatctagtag ttttaaatat gttcaacaag atgaagatag
     7261 tatttatttg tatcatcaaa agccgactca ataataaatt ttaatatgat gataccaaca
     7321 aaatgaattt gcttgaatta tttcagatta cctatgtttt cttactcaat cgtcttcatc
     7381 atcatgctta aatagcaatt gattttataa caacttgtag ttatctcaat atagttatcg
     7441 ctaagtgcaa gatttatgta aaaaaatcgt acacagcgta taattatgtt gagatatttt
     7501 tgtgcgttat aaaagtaaaa attagtaggg aggtgagcac ttgactgaga gacgaattat
     7561 tcatatagat atggactact tttttgcaca agtcgaaatg agagataacc ccaaattgaa
     7621 agggaaacca gtcattgttg gtggtaaagc aagtagtagg ggtgttgtct ctacggcatc
     7681 ttatgaagca cgaaaatacg gcgtccattc agcaatgcct atgtcacaag cgcataaatt
     7741 atgtccaaat ggatactttg tcacaagtaa ttttggtgct taccgagaaa catctgcgca
     7801 gattatgtct attttccgaa gttatacaga taaggtagaa ccgatgtcat tggatgaagc
     7861 gtatttagat attacagaat tagtgagacc agaccttcct gcttcgaaaa ttgctcagta
     7921 tattagaaaa gatattctag agcagacaca tttaacagca tctgcaggtg tttcttataa
     7981 caaattttta gctaaattag cgagtggtat gaataaacct gatggtatga ctgtgattga
     8041 ttatcaaaat gtccatgata ttttgatgac attggatatt ggagattttc cgggcgtagg
     8101 taaagcttcc aaaaaagtaa tgcatgataa tggtattttt aacggtagag atttatatga
     8161 gaaaacggaa tttgaattaa tacgtttgtt tggaaaaaga ggtcggggtt tatataacaa
     8221 ggcacgcggt attgaccata gtgaagtgaa atcatcaaga gtaagaaaat cagtagggac
     8281 agaacgcaca tttgcaacag acgtgaatga tgatgaggag attttaagaa aagtatggga
     8341 gttgtcaggt aaaacagctg aacgtctaaa taaattacag aagtcagcta aaactgtaac
     8401 ggttaaaatt aaaacttatc aatttgaaac gttatctaaa cagatgagtt taagagattc
     8461 ggttagttct gaagaagata tttataatat tgcatattta ctttataacg atttaaaaga
     8521 ccctgatgta ccaattcgac ttattggtgt cactgtaggt aatttagaac aatcaactta
     8581 taaaaatatg acgatatatg actttatata aaataaagct ccctgcaaag tttacatttt
     8641 tacaatgctt actttgaagg gagtatttta tttagtccta gcctttatct tttagatttt
     8701 taccataaat attagttaca tatgttaaat tttcataatt tttcagtagc ctaaaagtaa
     8761 tcattgcgca tgctttggca tcattcaatg catcatgatg accatgaaaa tctaattgat
     8821 aaaactccat catatgtttt aaaccgtatc gatacgaatc aacggttctt ttagcaagtt
     8881 gataactaca aaagtaagtt aaatttggag ttggtaaacc aatattttga atgctttgat
     8941 gtaagacgtt catatcaaat gccgcgttat gtgcgacaac aggtaaatct gcaataaatt
     9001 gcatcatata tggaaatacg tagtcaaacg taggtgcatt ttcaacatct tctggttgta
     9061 tgccatgaac tttaatattt tgttgtgaaa aatagtcttg cggattcaca agagtatgaa
     9121 atgtttctgt tatttgacta tcaatgactt taaccattcc gacagaacaa atacttgtac
     9181 gtttaccatt tgctgtttca aaatcaagtg caacaaacgc atcttgtatc atgtagtcaa
     9241 tcctttcaat taattaaatg tatatattaa tagacttttt agtcatttgc ttacaaacga
     9301 tacataatat tatacgtgaa ggtataacgt gaaatctatc atttggatgt aactctgatt
     9361 aaaaagtaaa tgatgatatg ctttaaaatc ggtcaaatta attcaacatt aaatttagag
     9421 ttattaacat tagtagttta aaaaataaat gactaaaaat acaataatta gccttgaaaa
     9481 tgaaaaaacg cagatcaatg attcagaaaa tgaatctagt gatctccgta aagcaaaata
     9541 atatagacat tgggttattg tatgtgaccc aaatgtctat catgtcgtat gatatttatc
     9601 tgtctattgt agtgatgttt aattattctt cgtcgaatgt acgagcgcca agttcttttt
     9661 cgtaaagata taatgcattg ctgtcatcgc cgatacgagt taaataattg atgtgagttt
     9721 caaacattga ttcttcttcg acttgttcat ctaagaacca gtttaagaat gagatagttg
     9781 cataatcttt atcttgacga gcgatttcag ataagttata gaaacgtctt gttacttctt
     9841 gttcttgaga taagctgtct ttgaaagttt ctagtatgct tgaaaagtca atttttggtg
     9901 ctgaaactgc tctgaattct gcatgtgcac ctctgtcgtt aatatagtta taaatctttt
     9961 gtccatggaa acgttcttct ttagcttgtt gaatgaagaa gtttgcaaat ccttcgtacg
    10021 attctttatc acagtatgct gccattgcca tatatgcatg tgctgcaaag tactcatggt
    10081 tcatttgatc atttaatgct tctaataaat ttttacttaa cattttgata cacctcttat
    10141 ttgtaaatta aaattactat gaattaaact tagtataaca aactcattct caattgtaaa
    10201 taataataat tataatttaa tgcccgattt cagcgctcta attgagaaaa tgtatcattt
    10261 agcgagattt aattgagaat aaatatcatt tttaattatc taaatgagaa tgattataat
    10321 ttagaaacac tgtatcaatt tgtgattgag aaactttttt gaagttgcct tgtcatgtta
    10381 taattatgcg agtggaaatt tgaggaggaa acacatgaga cagtggacgg caatccatct
    10441 agcgaaattg gcgcgtaaag caagtagagc agtaggtaaa agaggaacag atttacctgg
    10501 acaaatcgct agaaaagtgg atacagatat attaagaaaa ttagcagagc aagttgatga
    10561 tattgtattt atcagtggaa caaatggtaa aacaacgact tcaaacttaa ttggacatac
    10621 tttaaaagca aataatattc aaattataca caataatgaa ggtgctaata tggctgcagg
    10681 tataacttct gcattcatca tgcaatcaac acctaagact aaaattgcgg taatcgaaat
    10741 tgatgaaggt tcgattccac gtgtgttaaa agaagttaca ccttcaatga tggtatttac
    10801 taatttcttt agagatcaaa tggatcgctt cggtgaaatt gatattatgg ttaacaacat
    10861 tgcagagaca attagtaata aaggcatcaa attattgcta aatgctgatg atccatttgt
    10921 gagtcgtttg aaaatcgcaa gtgatacgat tgtgtactat ggtatgaaag cacatgccca
    10981 tgaatttgaa caaagtacga tgaatgaaag tagatattgt ccaaactgtg gtcgcttatt
    11041 gcaatacgat tatattcatt ataatcaaat tggtcattat cactgtcagt gtggtttcaa
    11101 acgagagcaa gcaaaatatg aaatatcaag ttttgatgtg gcaccgtttt tacatttaaa
    11161 tatcaatgat gaaaaatatg atatgaaaat tgcaggtgac tttaacgctt ataacgcgtt
    11221 agcagcatat acagttttaa gagagctagg gttaaatgaa caagcaatta aaaatggctt
    11281 tgaaacgtat acatcagaca atggtcgtat gcagtacttt aaaaaagaac gaaaagaagc
    11341 gatgatcaat ttagctaaaa accctgcagg aatgaatgca agtttatcag ttggtgaaca
    11401 attagagggc gaaaaagtgt atgttatttc gctaaatgat aacgctgcag atggtcgaga
    11461 tacttcatgg atttatgatg cagattttga aaaattatct aagcaacaaa ttgaagctat
    11521 catcgtgaca ggtacacgag cagaagaact tcaattgcga ttgaagttag cagaggttga
    11581 agtaccaatt atagttgagc gtgatattta taaagcaacg gcaaagacta tggattataa
    11641 aggtttcaca gttgcaatac caaactatac atcattagcg cctatgcttg aacaattaaa
    11701 ccgttcgttt gaaggaggtc aatcataata tgcatgaatt gactatttat cattttatgt
    11761 cagataaatt gaatttatac agtgatatag gaaatattat tgctttaaga caacgtgcaa
    11821 aaaaacgaaa tattaaagtt aatgtcgtag aaatcaatga aacagaaggt attacctttg
    11881 atgaatgtga tattttcttt atcggtggtg gaagtgatag agaacaagca ttagcaacaa
    11941 aagaattaag taaaattaag acaccactta aagaagcgat tgaagatggt atgccgggat
    12001 taacgatttg tggaggctat caatttttag gaaaaaaata tatcacgcct gatggtacag
    12061 aattagaagg gttaggtatt ttagattttt atactgaatc aaagacaaac cgattaacag
    12121 gagatattgt tatcgaaagt gatacttttg gaactattgt aggttttgaa aatcacggtg
    12181 gtagaacata tcataatttc ggtacacttg gtcatgttac ttttggttat ggtaataatg
    12241 atgaagataa aaaagaaggc attcattata aaaatttatt aggtacttat ttacacggac
    12301 caattttacc taaaaattac gaaatcactg attatctgtt agaaaaagct tgtgaacgta
    12361 agggtattcc gtttgagcct aaagaaatag ataatgaagc ggaaaagcaa gcgaaacaag
    12421 tattaataga cagagcaaat agacagaaga aatctcgtta actctgaaca tcgcatcaat
    12481 ggatttaaaa ttgataaacg atgaagtata gtaattaatc atatatgtat aaacacacac
    12541 attattttgg atggaaacaa ccaaattgat gtgtgttttt ttgttctagt gaataattat
    12601 tatacaatga gtatctatcc tagaattatc aatagtaatg gtgattatgc aacatgaaaa
    12661 aatgaatgat gaaaggaatt tgacgatgaa gcctactaaa gtgattttaa gagatgcatc
    12721 ttatgtacat agtaaaacat cgataacatt tattttaaaa gatgtagtta tcgaagaaga
    12781 taataaaatt tattatttcg acactagtgc aactttcgaa gatcaagaaa ttaaatttga
    12841 atttgcactt tttgatagtg acatggacaa tttgaaacat atggaatacg acaatcctgt
    12901 tactgaaata tattttatag aacctgattt acattttacg attattgatt ttaatcaaga
    12961 actgctttgt atttatattg attttgattc tggtttaagg cattcaaaca tggcaacaga
    13021 atctggtatt tcattaagga taaacgttac taaatcagat tttaataaat ttattaatga
    13081 attagcctcg ttacattaat gatttaaatc tgatacacaa ttacaatcaa aaaagacagc
    13141 cacatccctc cgtagtttag gtgtgtggct atatttgagt ctgaatattt atgcttgtaa
    13201 tttaaaaaag ggacatgcta tatacgataa aaatgaggct tggacataaa tcaatgttct
    13261 atgctctacg aagttaaatt ggcagtagtt gactgaacga aaatgcactt gtaacaagca
    13321 tttttcactt cttgtccggg gccccaacaa agagaaattg gattcccaat ttctacagac
    13381 aatgcaagtt ggggtgtggg ccccaacaca gaagctgacg aaaagtcagc ttacaataat
    13441 gtgcaagttg gggtgggacg acgaaataaa ttttgcgaaa atatcatttc tgtcccactc
    13501 ccatggtgcc aattagcatg aggtacttaa attaagcata tctgctgtct agcagtcgat
    13561 aaatcattag aacttcgtat agtatatgac ttttaatttg attttcacca ctaatttcat
    13621 gtgcttttat tgtcgaacgt aaagtttcta cagaatcatc ttctctctta aaagaaccat
    13681 cataaaatat atctttgatg ctactactaa tttttagtaa tgccattttt tcgtcacctg
    13741 aaaagttaac acgagtattt ttaggcaagt aaatgatatt tgataaatga gtgataaaca
    13801 aacgattcgt atatgcacgt ttagttaatt ggttgagtaa tttccaatca cattcttttt
    13861 tcttatgata gcttaattca tcacgttgat aacttattaa cgtttcaact tgattgttta
    13921 aattgaaaat atttttatat gctttttcgc ttttatcaga ttgcagtctt gataagataa
    13981 gttcttggca gcgatcgtaa aataatttat acatcaaggc atctgtctta cttaattttt
    14041 cttcgacctg accataatac ttaggtggaa acaccatgaa gttaattaaa cctgatgtca
    14101 cgagtccaat aatcgctgtc aatgttcgag acaagaagtt gaatatgtag gcatcatgaa
    14161 tacctggaat catagctaat gatgttagta cagcaacatt cgtaccaact tgcaatttga
    14221 gttttgtaca gaataaaatc gtgaacgtcg cactcaatgc atatgtaaaa ggtgattgat
    14281 cgccgaataa atatgtaaat aatactgcaa agcctgcacc aattaccgta gcaggtaatc
    14341 tacggtaacc tttaataagt gatgccttgg cagttggttc aattgtgact acagccgtta
    14401 aaatggcata gatgggagtt aaatctagtg ccatacaaaa gacagctgtt aaaaaaatgg
    14461 caataccagt cttaattgtt ctggcaccaa ttaaatgttt ataccattga tcgttcattt
    14521 tttaacctct aatcatcgta aaatcttagc gagcgcttta taataatagt atcgtacatt
    14581 ggaaaagttc atgtatgtaa aatatttgaa ataatcatgc ttaagcatta ctttgatttt
    14641 catatacatt aatcaaagtt ctgggctcca caatgttata ttgttagtag ttgactgaaa
    14701 taaaatgcac ttgtaacaag catttttcaa ttctagtccg gggcctcaac atagagaaat
    14761 tggaatacca atttctacag acaatgcaag ttggcggggc cccaacatag agaatttcga
    14821 aaaaagaaat tctacaggta atgcaggttg gcggggcccc aacacagaag ctgacgaaaa
    14881 gtcagcttac gataatgtgc aagttggggt acaacgataa agaaatattt tttctttatc
    14941 acactatgtc ccactcactt tccaaaatac taaagtaaca tctttagtat atcaaagaat
    15001 ttttgctata ataagttata attatataaa aaaggaacgg gataaaatga ttgtaaaaac
    15061 agaagaagaa ttacaagcgt taaaagaaat tggatacata tgcgctaaag tgcgcaatac
    15121 aatgcaagct gcaaccaaac caggtatcac tacgaaagag cttgataata ttgcgaaaga
    15181 gttatttgaa gaatacggtg ctatttctgc gccaattcat gatgaaaatt ttcctggtca
    15241 aacgtgtatt agtgtgaatg aagaggtggc acatgggatt ccaagtaagc gtgtcattcg
    15301 tgaaggagat ttagtaaata ttgatgtatc ggcattgaag aatggctatt atgcagatac
    15361 aggcatttca tttgtcgttg gagaatcaga cgatccaatg aaacaaaaag tatgtgacgt
    15421 agcaacgatg gcatttgaga atgcaattgc aaaagtaaaa ccgggtacta agttaagtaa
    15481 cattggtaaa gcggtgcata atacagctag acaaaatgat ttgaaagtca ttaaaaactt
    15541 aacaggtcat ggtgttggtt tatcattaca tgaagcgcca gcacatgtac ttaattactt
    15601 tgatccaaaa gataaaacat tattaactga aggtatggta ttagctattg aaccgtttat
    15661 ctcatcaaat gcatcatttg ttacagaagg taaaaatgaa tgggcttttg aaacgagcga
    15721 taaaagtttt gtcgctcaaa ttgagcatac ggttatcgtg actaaggatg gtccgatttt
    15781 aacgacaaag attgaagaag aatagttcaa catatactaa gactaaagta tgaacatcat
    15841 ttagttccgg agcctattca tattggtttc ggaactgttt tataataatt aagaacacaa
    15901 tcaatgcgtc atttcaaaaa tatgttgtaa taaagtagtt tttaagcaaa catatcatcg
    15961 acatcaacga agatacatag cgcatttggt attttaaaac ttattataaa aggtgatagt
    16021 tatgaactat gttgaacgtt atattgaaca gtttttgaga gcaacagtaa gaaataatat
    16081 caagcactac cttttaatgt tagatgaaaa aatgaaaaat ttagatgatt atatgcgtta
    16141 tttaattact aaaaaagaac aacttagcaa gttaattgac agtctaatgc taacattaga
    16201 aaataaatat attgatattg ctgaagcatt tcaaattcaa tgtgcaagag aaatcaataa
    16261 tcaagaaatt gaaaatatta aatcagagtt gaataaagtt gaagcatatt atgcacaaat
    16321 tgaaactcaa attcaacaaa cttcaactga aaaaatagca acagaaaaaa catcgtatct
    16381 aataaattat atgaacgctg tggcatagaa aggcggcgaa acatgacaca caaatatata
    16441 tcaacgcaaa tgttgatcat ttttactgca ttaatgatta ttgccaattt ttactacata
    16501 ttttttgaaa aaattggctt tttactcgtt ctattattgg gatgtgtatt agtttatgta
    16561 ggatatcttt attttcataa aatacgtggc cttttggcgt tttggatagg cgcgctatta
    16621 attgcattca cattattgtc taataagtat acaatcatca tcttgttcgt ctttttatta
    16681 ctacttattg tgcgttattt aatacacaaa tttaaaccaa aaaaagtagt tgcgacggat
    16741 gaggttatga cttcaccatc ttttattaaa caaaagtggt ttggtgagca acgcacacca
    16801 gtttatgtat ataagtggga agatgtccaa attcaacatg gaattggcga cctacatatt
    16861 gacttaacaa aagctgcaaa tattaaggaa aataatacca ttgttgttag acacatttta
    16921 ggtaaagtgc aggttatatt gccggttaat tacaatatta atttacatgt agctgctttt
    16981 tatggaagta cttatgtgaa tgaaaaatca tataaagttg aaaataacaa tattcatatt
    17041 gaagaaatga tgaaaccgga taactataca gttaatatct acgtatcaac gtttatcgga
    17101 gacgtagagg tgatttatcg atgaaccact acattagaac aattggttca atgctcatct
    17161 tagtatatag catgctagct gcatttctgt tcatcgataa agtttttgta aatatcatct
    17221 attttcaagg tatgttttat acacaaatat tcggaatacc agttttttta tttttaaatc
    17281 tcatcatcat attattgtgt attattgttg gttcggtact cgcttacaaa atcaatcagc
    17341 aaaatgattg gattaagacg caaattgagc gttcaatgga aggcgaaaca gttggtatta
    17401 atgatcaaaa tatagaaata tatagtgaaa cgttagattt ataccataca ctcgtacctt
    17461 taaatcaaga attgcataag ttgcgactta aaactcaaaa cttaaccaat gaaaattata
    17521 atattaatga tgtgaaagtt aaaaagatta ttgaagatga acgtcaacga ctagcacgag
    17581 aacttcacga ttctgttagt cagcaacttt ttgcggcaag tatgatgcta tctgctatca
    17641 aagaaacgaa gttagaacca ccattagatc aacaaattcc gattttagag aaaatggttc
    17701 aagattcgca gttagaaatg cgtgctttgc tgttacattt aagaccgctt ggtttaaaag
    17761 acaaatcttt aggtgagggt attaaagatt tagttattga tttacaaaaa aaagtgccaa
    17821 tgaaagttgt gcatgaaata caagatttta aagtgcctaa aggtattgaa gatcatttgt
    17881 tcagaattac acaggaagca atttcgaata cattgcgtca ttcaaacggt acaaaagtga
    17941 cagtagaatt gtttaataaa gacgattatt tattgttgag aattcaagac aatggtaaag
    18001 gttttaatgt tgatgaaaaa ttagaacaaa gttatggact taaaaatatg cgtgaaagag
    18061 ctttggaaat tggtgcaacg ttccatattg tatcattgcc agattcaggt acacgtatcg
    18121 aggtgaaagc acctttaaat aaggaggatt cgtatgacga ttaaagtatt gtttgtggat
    18181 gatcatgaaa tggtacgtat aggaatttca agttatctat caacgcaaag ggatattgaa
    18241 gtagttggtg aaggcgcttc tggtaaagaa gcaattgcca aagcccatga gttgaagcca
    18301 gatttaattt taatggattt acttatggaa gacatggatg gtgtagaagc gacgactcag
    18361 attaaaaaag atttaccgca aattaaagta ttaatgttaa ctagttttat tgaagataaa
    18421 gaggtatatc gtgcattaga tgcaggtgtc gatagttaca ttttaaaaac aacaagtgca
    18481 aaagatatcg ccgatgcagt tcgtaaaact tctagaggag agtctgtttt tgaaccggaa
    18541 gttttagtga aaatgcgtaa ccgtatgaaa aagcgcgcag agttatatga aatgcttaca
    18601 gaacgagaaa tggaaatatt attattgatt gcgaaaggtt actcaaatca agaaattgct
    18661 agtgcatcgc atattactat taaaacggtt aagacacatg tgagtaacat tttaagtaag
    18721 ttagaagtgc aagatagaac acaagctgtt atctatgcat tccaacataa tttaattcaa
    18781 tagttcatat cgaattaaga aaagttactt acgccaatca caatataaca tcaaatagac
    18841 accaaaaaac agaggtcttc gcaatcatta gcgaaaacct ctgttttgtt gatgtttagt
    18901 ctttttttag cttatcaacg attttgtctt ttatattttt atcatcttct ggataggtat
    18961 cactaggatg ttcatcaaca tgatacgtac gttgatgtgt tgcattagta tcttcagcat
    19021 attcgtacct agtgttctca ttataatgat ttttattatt gtcatcatgt tctaatgctg
    19081 cttcttcagg tgttttacct ttaattacac tacgctgatg aatgattgca ttgatttcag
    19141 caccgacaat tataataaaa cttgtgatat ataaccatag taacaaaatg atgatacccg
    19201 cgatactgcc atatgtttta gaatagttac caaaatttga aatataccaa ccaaaaccaa
    19261 atgaaccagc taaccaaata attgaagtaa atactgcacc tggtaatacc gatttaagtt
    19321 ttgttttaac gttaggtgca accgaatata acacgataaa cacgataaat ataataatga
    19381 ttggtaacac aattctaata agattaaaaa tccatttcac ttgttcgtca aatccaagtg
    19441 gaccgaatag gaaatgacta attacagaac caagcgttgg taatgctaga gcaactacaa
    19501 acacaacgcc cataactaca gtgaagacaa cacttagtag ttttaatacg attccattac
    19561 ggctatcttc tacatcgtaa gcaacattga aagaattcat aattgcagtc attccatttg
    19621 aagctgacca aattgctaaa atcaaaccga tagataataa gccaccactg gagttttgag
    19681 ttatatcacc aattacactc ttaattagag tagatgtttc agcgggtgca ttacttaaca
    19741 tattagtaat ttgactctgc ttaatattga aaaatggtaa tagtgttaat aggaaaagca
    19801 acatagggaa catagcaagt acgaaatggt aagtcatttg cgctgctaat cctgaggcat
    19861 catcttttcc tatgcgatag atgagatatg ataagaaatt agagtctttc ttatattttg
    19921 caggtttatt taatcttgat aagaagaaaa cctgatcctc ttttttaggt ttcttagatt
    19981 ggaattgttg aggttcaata tatgtacgat caacatcaat tttgggatta cttttatttt
    20041 tcttttttga ctcctcttgc gcttccttaa cagaattaag gtattttgaa gaagagtgat
    20101 cctttttcga catgtgcact ccttaacctt tctctatgta atgttttata aagtaacta
//
LOCUS       DALMNS010000050        20013 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.050, whole genome shotgun sequence.
ACCESSION   DALMNS010000050 DALMNS010000000
VERSION     DALMNS010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 20013)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20013)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20013
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.050"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..567
                     /locus_tag="O6Y56_001471"
     CDS             <1..567
                     /locus_tag="O6Y56_001471"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDB5574726.1"
                     /translation="NNQITSIIFKYLQENGIESHFIKQLSETEQLVKPVKIIPLEVVV
                     RNIASGSITKRLGFENGEVFREPLVEFFYKNDALNDPLITDDHIKLLNIATDKDIETL
                     KTKALEINQVLKNLMDAMNLKLVDFKIEFGKTETGQILLADEISPDTCRIWDKATSAN
                     FDKDVYRNNTGSLIETYQIFLNKLEDLK"
     gene            567..830
                     /gene="purS"
                     /locus_tag="O6Y56_001472"
     CDS             567..830
                     /gene="purS"
                     /locus_tag="O6Y56_001472"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HDB5574727.1"
                     /translation="MKTIELHITLQPQVLDTQGQTLTRAVHDLGYAQVNDIRVGKVLY
                     MTVDEVSDEKVHNIITTLSEKLFANTVIEEYSYKVLDDEKENA"
     gene            832..1503
                     /gene="purQ"
                     /locus_tag="O6Y56_001473"
     CDS             832..1503
                     /gene="purQ"
                     /locus_tag="O6Y56_001473"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase I"
                     /protein_id="HDB5574728.1"
                     /translation="MKFAVLVFPGSNCDRDMFNAAIKSGVEAEYVDYRETSLSGFDGV
                     LIPGGFSFGDYLRSGAMASVAPIISEVKRLAAEGKPVLGVCNGFQILTEIGLLPGALL
                     HNDSHLFISRNEELEIVNNQTAFTNLYEQGEKVIYPVAHGEGHYYCTDEIYQQLKANN
                     QIILKYVNNPNGSYDDIAGIVNEKGNVCGMMPHPERALETLLGTDSGVKLFEAMVKSW
                     REQHV"
     gene            1496..3685
                     /gene="purL"
                     /locus_tag="O6Y56_001474"
     CDS             1496..3685
                     /gene="purL"
                     /locus_tag="O6Y56_001474"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HDB5574729.1"
                     /translation="MSKFIEPSVEEIKLEKVYQDMGLSDQEYEKVCDILGRQPNFTET
                     GIFSVMWSEHCSYKHSKPFLKQFPTSGEHVLMGPGEGAGVVDIGDNQAVVFKVESHNH
                     PSAIEPYQGAATGVGGIIRDIVSIGARPINLLNSLRFGELDNKQNQRLLKGVVKGIGG
                     YGNCIGIPTTAGEIEFDERYDGNPLVNAMCVGVINHDMIQKGTAKGVGNSVIYVGLKT
                     GRDGIHGATFASEELTEESESKRPSVQIGDPFVGKKLMEATLEAITFDELVGIQDMGA
                     AGLTSSSSEMAAKGGSGLHLRLEQVPTREPGISPYEMMLSETQERMLLVVEKGTEQKF
                     LDLFDKHELDSAVIGEVTDTNRFVLTYDDEVYADIPVEPLADEAPVYILEGEEKNYNT
                     SKNDYTHIDVKDTFFKLLKHPTIASKHYLYDQYDQQVGANTIIKPGLQASVVRVEGTN
                     KAIASTIDGEARYVYNNPYEGGKMVVAEAYRNLIAVGATPLAMTDCLNYGSPEKKEIY
                     QQLIDSTKGMAEACDILKTPVVSGNVSLYNETKGTSIFPTPVVGMVGLIENVNYLNDF
                     EPQVGDKLYLIGDTKDDFGGSQLEKLIYGKVNHEFESLDLSSEVEKGESIKTAIREGV
                     LSHVQTVGKGGLLITLAKLSAHYGLGLKSSIDITNAQLFSETQGRYVVSVKSGKTLNI
                     DNAIEIGLLTDSDNFKVTTPYTEISENVSDIKQIWEGAIAQCLTTQD"
     gene            3664..5148
                     /locus_tag="O6Y56_001475"
     CDS             3664..5148
                     /locus_tag="O6Y56_001475"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDB5574730.1"
                     /translation="MFNYSGLNEECGVFGIWNHPEAAQLTYMGLHSLQHRGQEGAGIV
                     VSNQNELKGERGLGLLTEAIKDDQMERLKGYQHAIGHVRYATSGNKGIENIQPFLYHF
                     YDMSVGICHNGNLINAKSLRQNLEKQGAIFHSSSDTEVIMHLIRRSKAPTFEEALKES
                     LRKVKGGFTFAILTKDALYGAVDPNAIRPLVVGKMKDGTYILASETCAIDVLGAEFVQ
                     DIHAGEYVVINDKGITVKSYTHHTTTAISAMEYIYFARPDSTIAGKNVHAVRKASGKK
                     LAQESPVNADMVIGVPNSSLSAASGYAEEIGLPYEMGLVKNQYVARTFIQPTQELREQ
                     GVRVKLSAVKDIVDGKNIILVDDSIVRGTTIRRIVKILKDSGANKVHVRIASPEFMFP
                     SFYGIDVSTTAELISASKSPEEIKDYIGADSLAYLSVDGLIESIGLDYDAPYSGLCVE
                     SFTGDYPAGLYDYEANYKAHLSHRQKQYISKNKHFFDSEGNLNV"
     gene            5141..6169
                     /locus_tag="O6Y56_001476"
     CDS             5141..6169
                     /locus_tag="O6Y56_001476"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDB5574731.1"
                     /translation="MSKAYEQSGVNIHAGYEAVERMSSHVKRTMRKEVIGGLGGFGAT
                     FDLSQLNMTAPVLVSGTDGVGTKLKLAIDYGKHDSIGIDAVAMCVNDILTTGAEPLYF
                     LDYIATNKVVPEVIEQIVKGISDACVETNTALIGGETAEMGEMYHEGEYDVAGFAVGA
                     VEKDDYVDGSEVKEGQVVIGLASSGIHSNGYSLVRKLINESGIDLASNFDNRPFIDVF
                     LEPTKLYVKPVLTLKKEVSIKAMNHITGGGFYENIPRALPAGYAARIDTTSFPTPKIF
                     DWLQQQGDIDTNEMYNIFNMGIGYTVIVDEKDASRALKILAEQNVEAYQIGHIVKNES
                     TAIELLGV"
     gene            6172..6738
                     /gene="purN"
                     /locus_tag="O6Y56_001477"
     CDS             6172..6738
                     /gene="purN"
                     /locus_tag="O6Y56_001477"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDB5574732.1"
                     /translation="MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFC
                     IDRAKKHDIPVYINEPKQFDSKAAYEQHLVTLLNKDKVEWIILAGYMRLIGPDLLASF
                     EGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQRQCDIRP
                     DDSKEQLEEKVKKLEYELYPSVIAKIVK"
     gene            6753..8231
                     /gene="purH"
                     /locus_tag="O6Y56_001478"
     CDS             6753..8231
                     /gene="purH"
                     /locus_tag="O6Y56_001478"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDB5574733.1"
                     /translation="MKKAILSVSNKTGIVEFAKALTQLNYELYSTGGTKRILDEANVP
                     VRSVSDLTHFPEIMDGRVKTLHPAVHGGILADRNKPQHLNELSEQHIDLIDMVVVNLY
                     PFQQTVANPDVTMDEAIENIDIGGPTMLRAAAKNYKHVTTIVHPADYQEVLTRLRNDS
                     LDESYRQSLMIKVFEHTAEYDEAIVRFFKGDKETLRYGENPQQSAYFVRTSNAKHTIA
                     GAKQLHGKQLSYNNIKDADATLALVKKFDTPAAVAVKHMNPCGVGIGDTIEQAFQHAY
                     EADSQSIFGGIVALNRAVTPELAEQLHSIFLEVIIAPKFTGEALDILKQKKNVRLLEI
                     DMIIDSNEEEFVSVSGGYLVQDKDNYVVPKEEMKVVTEVAPTDEQWEAMLLGWKVVPS
                     VKSNAIILSNNKQTVGIGAGQMNRVGAAKIALERAIEINDHVALVSDGFFPMGDTVEL
                     AAQHGIKAIIQPGGSIKDQDSIDMANKHGIAMVVTGTRHFKH"
     gene            8253..9500
                     /locus_tag="O6Y56_001479"
     CDS             8253..9500
                     /locus_tag="O6Y56_001479"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDB5574734.1"
                     /translation="MNVLVIGAGGREHALAYKLNQSSLVKQVFVIPGNEAMTPIAEVH
                     TEISESDHQGILDFAKQQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEG
                     SKLFAKKIMEKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTI
                     EAARSAIEIMYGDEEEGTVVFETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHD
                     EGPNTGGMGAYCPVPHISDDVLKLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDG
                     PKVIEFNARFGDPEAQVLLSRMESDLMQHIIDLDEGNRTEFKWKNESIVGVMLASKGY
                     PDAYEKGHKVSGFDLNENYFVSGLKKQGDTFVTSGGRVILAIGKGDNVHDAQRDAYEK
                     VSQIQSDHLFYRHDIANKALQLK"
     gene            complement(9766..10572)
                     /locus_tag="O6Y56_001480"
     CDS             complement(9766..10572)
                     /locus_tag="O6Y56_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HDB5574735.1"
                     /translation="MYEQWKVRQSFVDDVNIITKLFLGIILFFFIIFVHNFDFMLYIT
                     ILMLVFLLMFNGTQFKITAIFITISIGFALLSSLFMILYGNGSHTILKFGFIHITTES
                     LVRGLHVSLRTIAISFFGILIALTSQVVMIFYSLMQHLKVKSKVAYAFMAAIRMIPLM
                     ISSLIQLRRSLKMRYQMIDAANYRGLKRFKHLIIPLLSQNIRKAHQLSVAMESKGFRD
                     GPRTYYYNVPFSYKDVIFIIVLIAIITLAYYCSITLPITGIDDVRLGRVG"
     gene            complement(10565..11965)
                     /locus_tag="O6Y56_001481"
     CDS             complement(10565..11965)
                     /locus_tag="O6Y56_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574736.1"
                     /translation="MLKVSDLRLKYPSGQRKIFDHLNITIQDKEKVLLLGPSGCGKST
                     LLNVLSGIVPNLIELPMKYDELIVDPLSGVIFQDPDSQFCMPKVYEELAFVLENRQVP
                     REDMDALIINALNMVNLNVTPETYIKDLSGGMKQKLAIVETILQQSKTLFLDEPTAML
                     DVQATEDLWTKLIELWEDQTVVIVEHKVKHIWNHVDRVILMDYNGNIIADECPEIILQ
                     KYVHLLSEYGVWHPRAWEFAPSRVDFPTTNSHLLQFKNGRIIRGKSTLLSFSDLEIGL
                     GEWITITGANGSGKTTLLESIMQLIKYQGDVYFENQRLTKIKHAAKHMYLVYQNPELQ
                     FITNSVYDEINIHFNHLSKDQSDDETIQLLKLLDLENVKDQHPYELSIGQKRRLSVAT
                     ALSSKADIIFLDEPTFGLDSHNTFQLIKLFQKRINLGQSIVMVTHDDEIIERYPSRRL
                     KISDGALLDCDGDTNV"
     gene            complement(11980..12555)
                     /locus_tag="O6Y56_001482"
     CDS             complement(11980..12555)
                     /locus_tag="O6Y56_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HDB5574737.1"
                     /translation="MSKGLKLSEILVTVLISVVFAVIYNLWWFVYNGVQATGLHLEQL
                     TNGVWFMAAIVCYLIIPKPGIALLAEFAAGAGETIIMGRFDIPTIVYAFIQGLACELV
                     FAIFKYQSRSVMVAMLAGFCTAIAAFPIDYFYGYLNEVAGWNLTLFIVFRLISGAVVA
                     GVLSYLLVKALDKTGVTKLFRPAAKEDYDNL"
     regulatory      complement(12632..12732)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(13139..13273)
                     /gene="graF"
                     /locus_tag="O6Y56_001483"
     CDS             complement(13139..13273)
                     /gene="graF"
                     /locus_tag="O6Y56_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycopeptide resistance-associated protein GraF"
                     /protein_id="HDB5574738.1"
                     /translation="MSNENQNKKAAEKAKEVEEKLKDKKEEKTEDINQTKQDIQDTLN
                     "
     gene            13425..14720
                     /locus_tag="O6Y56_001484"
     CDS             13425..14720
                     /locus_tag="O6Y56_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574739.1"
                     /translation="MSFLRKHAEIIFSYLIGIVSLFTGLIILINLPLIKQLNGGKKVD
                     THVHNVREFLNAFFSEIIKVMSRFIGNFPIVSAIVIIIFGILVMLIGHTLLRTIKYDY
                     DISIFFLVIGIMYFIITLILMTQVYGFFAVIFIIPFTIHIGYIVYKDELNQENVKNHY
                     MWIIVSYGISYLITQIALYGRIDANEIESIDILSVNAFFIIMWLLGQMAIWNFLFLRR
                     ALPLTKQELGEEEPELSRTSKGNVTNQTKIHLKQLQDKTTEYARKTRRSVDLDKIRAK
                     RDKFKKKVNDIIDIQEDDIPDWMRKPKWVKPMYVELFCGVVIFLFTFLEFNNRNALFV
                     SGDWKLSQTQYVIEWVTLLILLFIIIAYIATTLTFHLKGKFYYLQLFMGSILFFKLLT
                     EFINIMIHGLLLSVFITPTLLLMLLAIIISYSLQLRERP"
     gene            15145..16317
                     /locus_tag="O6Y56_001485"
     CDS             15145..16317
                     /locus_tag="O6Y56_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HDB5574740.1"
                     /translation="MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDIFQIVTDK
                     SQYVATAYVGRQHKGLGWVLTYDKAQEINTAFFVKLFNTALAERDYYFNIDGTNAFRL
                     FNAEGDGVGGLTIDNYDGHLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDS
                     EYSGGFVEGDAPEFPIVIEENFTFYNVDLEDGLMTGIFLDQKEVRKKLRDQYAKERHV
                     LNLFSYTGAFSVIAASEASSTTSVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDF
                     YKYAARHGHSYDTIVIDPPSFARNKKRTFSVQKDYDKLINGALNILSSEGTLLLCTNA
                     SVYPLKQFKNTIKKTLEESGVDYELTEVMGLPKDFKTHPHYKPSKYLKAVFVNIRH"
     gene            16371..16913
                     /locus_tag="O6Y56_001486"
     CDS             16371..16913
                     /locus_tag="O6Y56_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF697 domain-containing protein"
                     /protein_id="HDB5574741.1"
                     /translation="MGFKNNLTSNLTNKIGNSVFKIENINEKGAMPTTIKELNERRQR
                     AEAIVKRKSLMSSTMSVVPIPGLDFGVDLKLMKDIIEDVNKIYGLDHKQVNSLGDDMK
                     ERVMSAAAIQGSQFIGKRISSAFLKIVIRDVAKRTAAKQTKWFPVVGQAVSASISYYF
                     MNKIGKDHIQKCENVIKNVM"
     gene            17067..17333
                     /locus_tag="O6Y56_001487"
     CDS             17067..17333
                     /locus_tag="O6Y56_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein HPr"
                     /protein_id="HDB5574742.1"
                     /translation="MEQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNL
                     KSIMGVMSLGVGKDAEITIYADGSDESDAIQAISDVLSKEGLTK"
     gene            17336..19054
                     /gene="ptsP"
                     /locus_tag="O6Y56_001488"
     CDS             17336..19054
                     /gene="ptsP"
                     /locus_tag="O6Y56_001488"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HDB5574743.1"
                     /translation="MSKLIKGIAASDGVAIAKAYLLVEPDLTFDKNEKVTDVEGEVAK
                     FNSAIEASKVELTKIRNNAEVQLGADKAAIFDAHLLVLDDPELIQPIQDKIKNENANA
                     ATALTDVTTQFVTIFESMDNEYMKERAADIRDVSKRVLSHILGVELPNPSMIDESVVI
                     VGNDLTPSDTAQLNKEFVQGFATNIGGRTSHSAIMSRSLEIPAIVGTKSITQEVKQGD
                     MIIVDGLNGDVIVNPTEDELIAYQDKRERYFADKKELQKLRDADTVTVDGVHAELAAN
                     IGTPNDLPGVIENGAQGIGLYRTEFLYMGRDQMPTEEEQFEAYKEVLEAMNGKRVVVR
                     TLDIGGDKELSYLNLPEEMNPFLGYRAIRLCLAQQDIFRPQLRALLRASVYGKLNIMF
                     PMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDF
                     FSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMA
                     GDETAIPLLLGLGLDEFSMSATSILKARRQINGLSKNEMTELANRAVDCATQEEVIEL
                     VNNYVK"
     gene            complement(19291..19524)
                     /gene="nrdH"
                     /locus_tag="O6Y56_001489"
     CDS             complement(19291..19524)
                     /gene="nrdH"
                     /locus_tag="O6Y56_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HDB5574744.1"
                     /translation="MSEIIVYTQNDCPPCTFVKNYLTEHQIVFEERNINNQQYRNEMI
                     DFDAFSTPFILLNGNPMYHVDLDEINKVLNIQD"
     gene            19722..>20013
                     /locus_tag="O6Y56_001490"
     CDS             19722..>20013
                     /locus_tag="O6Y56_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDB5574745.1"
                     /translation="MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKND
                     LQYIAMAKRWAKAYTITVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFM"
BASE COUNT         7032 a         2801 c         3797 g         6383 t
ORIGIN      
        1 aataatcaaa ttacttctat tatatttaaa tatttacaag aaaatggaat agaaagtcac
       61 tttattaagc aattatctga aacagaacaa ttagttaagc ctgtgaaaat aattccatta
      121 gaagtagttg ttcgtaatat tgctagtgga tctattacaa agcgtttagg ttttgaaaat
      181 ggtgaagttt ttagagaacc acttgtggaa tttttctata aaaatgatgc attaaatgat
      241 ccgttgatta cagatgatca catcaaatta ctgaatattg cgacagataa agatattgaa
      301 acattaaaaa cgaaagcgct agaaattaat caagtattaa aaaatttaat ggatgctatg
      361 aatttaaaat tagtagattt taaaatcgaa tttggaaaga ctgagactgg tcaaattttg
      421 ttagcggatg aaatatctcc agatacatgt cgaatttggg ataaagctac cagtgcaaac
      481 tttgataaag atgtatatag aaataacact ggatcactga ttgaaacata tcaaatattt
      541 ttaaacaaat tggaggattt aaaataatga aaacaattga actacatatc acattacaac
      601 cacaagtatt agatacgcaa ggacaaacgc ttactcgagc tgtacatgat ttaggttatg
      661 cacaagtgaa tgatattcgt gtaggaaaag tattatatat gacagtggat gaggttagtg
      721 atgaaaaggt acacaacatt attacaactc taagtgaaaa attgtttgca aatacagtga
      781 ttgaagaata tagctataaa gtgttagatg atgaaaagga gaatgcataa aatgaaattt
      841 gcggttcttg tttttccagg ttcgaattgt gatagagaca tgtttaatgc tgctattaaa
      901 agtggtgttg aagcggaata tgtagattat agagaaacat cactaagtgg atttgatggc
      961 gtacttattc ctggtggatt ttcattcggg gattacttaa gatctggggc aatggctagt
     1021 gtagcgccga ttatttctga agttaaacgt cttgcagctg aaggtaagcc agtattaggt
     1081 gtttgtaatg gatttcaaat tttaactgaa ataggtttat tacctggtgc attattgcat
     1141 aacgattcac atttatttat tagtagaaat gaagagttag aaatagtgaa taatcaaaca
     1201 gcatttacaa atctttatga acaaggtgaa aaagttatat atcctgtagc tcacggcgaa
     1261 ggtcattatt attgtactga tgaaatatat caacaattaa aagctaacaa tcaaattatt
     1321 ctgaaatatg tgaataatcc gaacggttca tatgatgata ttgcaggaat tgttaacgaa
     1381 aaaggcaatg tatgtggcat gatgccacat cctgaaagag ctttagaaac gttgttaggt
     1441 actgatagtg gtgtgaaatt atttgaagcg atggtaaaaa gttggaggga acaacatgtc
     1501 taaatttatc gaaccaagcg ttgaagaaat taaacttgaa aaagtatatc aagatatggg
     1561 attaagtgat caagaatatg aaaaagtttg cgatatttta ggcagacaac ctaactttac
     1621 agaaacaggt atcttttctg ttatgtggag tgaacattgc tcttataaac attctaaacc
     1681 gtttttaaag caatttccta cgtcaggtga gcatgtgctt atggggccag gtgaaggtgc
     1741 aggggtagtc gatataggtg ataatcaagc cgtagtattt aaagtagagt ctcacaatca
     1801 tccatcagca attgaaccat atcaaggggc tgctacaggc gttggcggaa tcattcgtga
     1861 cattgtctct attggggcta gacctattaa tttgttaaac agtcttagat ttggagaatt
     1921 agataataaa caaaaccaaa gattacttaa aggggttgta aagggtatcg gaggttatgg
     1981 taactgcatt ggtattccaa caactgccgg tgaaatcgaa tttgatgaac gttatgatgg
     2041 caatccactt gttaatgcaa tgtgtgttgg tgttatcaat cacgacatga ttcaaaaagg
     2101 cacagcaaaa ggtgtaggta attcggtcat ttatgttggt ttgaaaactg gtcgagatgg
     2161 tattcatggt gctacttttg catctgaaga attgacggaa gaaagcgaaa gtaaacgacc
     2221 ttctgtacaa atcggtgatc catttgtagg taaaaaatta atggaagcaa cacttgaagc
     2281 aattacattt gatgaattag ttggtattca agatatgggt gctgctggtt taacatcttc
     2341 atcttctgaa atggcagcaa aaggtggtag tggtttacat ttgagattag aacaagtgcc
     2401 aacacgtgag ccaggtattt ctccttatga aatgatgctt tcagaaactc aagaacgtat
     2461 gttactagtt gttgaaaaag gtactgaaca aaaattctta gatttatttg ataagcacga
     2521 attggatagt gctgttatag gtgaagttac agatacaaat cgttttgttt taacatatga
     2581 tgacgaagtt tatgctgaca ttccagttga accactagct gatgaagcac ctgtatatat
     2641 tttagaagga gaagaaaaaa attataatac ttctaaaaat gattatacac acatcgatgt
     2701 taaagatact ttctttaaat tacttaaaca tccgactata gcatctaaac actatttata
     2761 tgatcaatac gaccaacaag ttggtgccaa tacgataatt aagccaggac ttcaagcatc
     2821 ggtagtacgt gtggaaggca caaataaggc aattgcttca acaattgatg gtgaagcgcg
     2881 ttatgtatat aacaatccat atgaaggtgg aaagatggta gtagctgaag cttatcgaaa
     2941 tttaattgcc gtgggtgcaa caccattagc aatgacagat tgtttaaatt atggttctcc
     3001 tgaaaagaaa gaaatctatc aacagttgat agattcaacg aaaggtatgg cagaagcatg
     3061 cgacattctt aagacaccag tagtttctgg taatgtatct ttatataacg aaacgaaagg
     3121 tacttctatt ttcccaacac cagttgttgg aatggtaggt ttaattgaaa atgtaaatta
     3181 tttaaatgat tttgaacctc aagttggaga taaattatat ttaatcggtg atactaagga
     3241 cgactttggt ggtagtcaac ttgaaaagtt aatttatggc aaagttaatc atgaatttga
     3301 gtcattagat ttgagttcag aagttgaaaa aggtgaatca atcaagactg ctattcgtga
     3361 aggggtatta tcacatgttc aaacggttgg taaaggtggc ttactgatta ccttagctaa
     3421 actaagtgcg cattacggtt taggattaaa gtcttcaata gatataacaa atgcacaatt
     3481 gtttagtgag acacaaggcc gatatgttgt ttctgttaaa tcaggtaaaa ctttaaatat
     3541 tgataatgca atagaaattg gacttttaac agatagtgat aatttcaaag taacaacacc
     3601 atatacagag attagtgaaa atgtttcaga tattaaacaa atatgggaag gggcaattgc
     3661 tcaatgttta actactcagg attaaacgaa gaatgtggcg tgtttggtat ttggaatcat
     3721 cctgaagcag cgcaactaac atatatggga cttcatagtt tgcaacatcg tggtcaagaa
     3781 ggtgcaggta tagttgtttc taatcaaaat gaattaaaag gcgagcgagg attaggctta
     3841 ctaactgaag cgattaaaga tgaccaaatg gaacgattaa aaggatatca acatgcaatt
     3901 ggtcacgtcc gttatgctac ttcaggtaat aaaggtattg aaaatattca accgtttctg
     3961 tatcactttt atgatatgag tgtaggtatt tgtcataatg gtaacctcat taatgctaaa
     4021 tcattgcgtc agaatttaga aaaacaaggt gctatcttcc attcgtcttc tgatactgaa
     4081 gtcattatgc atttgatacg tcgaagtaaa gctcctactt ttgaggaagc gttgaaagaa
     4141 agtttgcgaa aagttaaagg cggttttaca tttgcgattt taactaaaga tgcgttatat
     4201 ggcgcagtag atccaaatgc tatcagacct cttgttgtag gtaaaatgaa agatggtaca
     4261 tacatccttg caagtgaaac atgtgcaata gatgtgttag gtgcagaatt tgttcaagat
     4321 attcatgcag gtgaatatgt cgtgattaac gataaaggta ttacagttaa atcttataca
     4381 catcatacga caactgcaat ttctgcgatg gaatatattt attttgctag accagattca
     4441 acaatagctg gtaaaaatgt ccatgcagta cgtaaagctt ctggtaaaaa attagcccaa
     4501 gaaagccctg taaatgctga tatggtcatc ggtgtaccca attcatcgct atcagctgcg
     4561 agtggttatg ctgaagaaat aggtttgcca tatgaaatgg gactagttaa aaatcaatat
     4621 gttgcaagaa catttattca accaactcaa gaattacgtg agcaaggtgt gagagtgaag
     4681 ttatctgcgg taaaagatat agtagatggg aaaaatatca ttcttgttga tgattccatt
     4741 gttcgcggta cgacaattag acgcattgtg aaaatattaa aagattctgg tgcaaataaa
     4801 gtgcatgtgc gtatagcatc accggaattt atgttcccaa gtttttatgg aatcgatgtt
     4861 tcaactacgg cagaattaat ttctgcaagc aaatcacctg aagaaattaa agattatatt
     4921 ggcgctgatt cattagcata tctatctgta gatgggttaa ttgaatcaat tggtttagat
     4981 tatgacgcgc catatagtgg cttatgtgta gaaagtttca ctggagatta tcctgcaggg
     5041 ttatatgatt atgaagcaaa ttataaagca catttaagtc atcgacaaaa gcaatatatt
     5101 tctaaaaaca aacacttttt tgatagcgag ggaaatttaa atgtctaaag catatgaaca
     5161 atctggtgta aatattcatg ctggttatga agctgtagaa agaatgtcta gtcatgttaa
     5221 acgtacgatg cgtaaagaag ttatcggtgg tttaggtgga ttcggtgcta catttgattt
     5281 atcacaatta aatatgacag caccagtttt agtttctgga acagacggag taggaacgaa
     5341 attaaaacta gctatcgact atggtaaaca tgattcgata ggtatcgatg cagttgcaat
     5401 gtgtgttaat gatattttaa cgacaggtgc agaaccatta tattttttag attacatcgc
     5461 tacaaacaaa gttgttcctg aagttattga acaaattgtt aaaggtatta gtgatgcatg
     5521 tgttgaaacg aatactgcac ttatcggtgg agagactgct gaaatgggtg aaatgtatca
     5581 cgaaggcgaa tatgatgtag ccggatttgc tgttggagca gttgaaaagg atgactatgt
     5641 agatggttca gaagtgaaag agggacaagt tgttataggg cttgcgtcaa gtggcattca
     5701 ttcaaatgga tacagtttag tgcgcaaatt aattaatgaa tcaggcattg atttggcatc
     5761 aaacttcgat aatcgtccat ttatagatgt ctttttagaa ccaactaaat tgtatgtcaa
     5821 acctgtactt actttgaaaa aagaagtttc tattaaggca atgaatcata ttactggtgg
     5881 aggtttttat gaaaatattc cacgtgcatt gccagccgga tatgctgcta gaattgatac
     5941 aacatcattt ccaacgccaa aaatatttga ttggttacaa caacaaggcg atatagacac
     6001 aaatgaaatg tataacattt ttaatatggg tattggctat acggttatcg ttgatgaaaa
     6061 agatgcatca cgcgctttga agattttagc agaacaaaat gtggaagcct atcaaattgg
     6121 tcatattgtg aaaaatgagt caactgcaat cgaattgttg ggggtataac aatggttaaa
     6181 attgcgattt ttgcatcagg ttcaggaagt aactttgaaa atatagttga gcatgttgaa
     6241 tcaggaaaac ttgaaaatat tgaagttacg gcgctatata cggatcatca aaatgcgttt
     6301 tgtatagata gagcaaaaaa gcacgatatt cctgtttata ttaatgaacc aaaacaattt
     6361 gattcaaaag cagcgtatga acaacattta gtaacattat taaataaaga taaggtagag
     6421 tggattattt tagctggcta catgcgtcta attggtccag acttattagc ttcatttgaa
     6481 ggtaaaatat tgaatataca tccatctcta ttgccgaaat ataaggggat tgacgcaata
     6541 ggccaagcat atcatagtgg cgatactatt actggttcga cagtacatta tgttgatagt
     6601 ggtatggata cgggagaaat tattgaacag agacaatgtg atattagacc ggacgattca
     6661 aaagaacaat tagaagagaa agtaaaaaaa ttggaatatg agttatatcc aagtgttatt
     6721 gctaaaattg taaaataagg agtatgtatg tgatgaagaa agctattttg agcgtatcaa
     6781 ataaaacagg tattgtagag tttgctaaag cgttaacgca attaaattat gaattatatt
     6841 caacaggtgg aactaaacgt atattagatg aagcaaatgt accagttcgt tctgtttcag
     6901 acttaacaca ttttccagaa ataatggatg gccgtgttaa aacattacat ccggctgttc
     6961 atggtggcat tttagctgat cgaaataaac cgcagcattt aaatgaatta tcagaacaac
     7021 atatagattt aattgatatg gtagtagtta atttatatcc attccaacaa actgttgcaa
     7081 accctgatgt gacgatggac gaagcaattg aaaatattga tattggtggt ccaacaatgt
     7141 tacgtgctgc agctaaaaac tataaacatg taacaacaat tgtacatcct gcagattatc
     7201 aagaagtatt gacgcgatta agaaacgatt cgttagatga gtcatataga caatcattaa
     7261 tgatcaaagt ttttgagcat actgcagaat atgatgaagc gattgtacgt ttctttaaag
     7321 gggataaaga aactttaaga tatggagaaa atccacaaca atcagcgtat tttgtgagaa
     7381 cttcgaatgc taagcacacg attgcaggcg ctaaacaatt acatgggaaa caattaagct
     7441 ataacaatat taaagatgca gatgctacac tagctttagt taaaaagttt gatacacctg
     7501 ctgcagttgc ggttaaacac atgaatccat gtggtgttgg tatcggtgac acgatagaac
     7561 aagcatttca acatgcgtat gaagcggata gtcaatcaat atttggtgga attgttgcat
     7621 taaaccgagc tgtaacacct gagttagcag agcaattgca tagtatcttt ttggaagtta
     7681 ttattgcacc aaaatttaca ggtgaagcat tagatatttt aaaacaaaag aagaatgtaa
     7741 gattattaga aattgatatg attatagaca gtaacgaaga agagtttgtt tcagtatctg
     7801 gcggatattt agttcaagat aaagacaatt atgtcgtgcc aaaagaagaa atgaaagttg
     7861 ttacagaagt tgcacctact gatgaacaat gggaagcaat gttattagga tggaaagttg
     7921 taccatcagt aaaaagtaat gcaattattt taagtaataa taaacaaact gtaggtatag
     7981 gtgctggaca aatgaatcgt gtcggtgctg ctaaaattgc gttagagaga gctattgaaa
     8041 tcaatgatca tgtagcgtta gtatctgatg gatttttccc tatgggagat acagttgaac
     8101 ttgcagcaca acatggtata aaggcaatta tccaaccggg tggttcgatt aaagatcaag
     8161 attcaattga tatggctaat aaacatggta ttgcaatggt agtcacaggc actcgacatt
     8221 ttaaacacta attttaaagg ggcgtaacat aaatgaatgt attagtaatt ggtgctggtg
     8281 gacgagaaca tgcacttgca tataaactta atcaatcgag tctagttaaa caagtgtttg
     8341 tcattccagg taatgaggca atgacaccta tagctgaagt acacactgaa atttcagaat
     8401 ctgatcatca agggatacta gattttgcta aacagcaaaa tgttgattgg gtagttatag
     8461 gtccagaaca accgctaatt gatggattag cagacatttt acgagcgaat ggtttcaaag
     8521 tgtttggtcc aaataagcaa gcagctcaaa tcgaaggctc aaaattattt gctaaaaaga
     8581 taatggaaaa atataatatt ccaactgctg attataaaga agttgagcga aaaaaggatg
     8641 ctttaacata tattgagaac tgtgaattgc ccgttgttgt caagaaagat gggttagctg
     8701 ctgggaaagg cgttattatt gcagatacta ttgaagcagc cagaagtgct attgagatta
     8761 tgtatggtga tgaagaagaa ggtactgttg tatttgaaac gtttttagaa ggtgaagagt
     8821 tctcgctaat gacatttgtt aatggtgatt tagcagttcc tttcgactgt attgcacaag
     8881 atcataaacg cgcatttgat catgatgaag gaccaaatac tggtggtatg ggggcttatt
     8941 gtccagtacc acatattagt gacgatgttt taaaacttac aaatgaaacg attgcacaac
     9001 ccattgcaaa ggcaatgctt aatgaaggtt atcaattctt cggtgtatta tacattggtg
     9061 ctattttaac taaagatggt ccaaaagtaa ttgaatttaa tgcccgtttt ggtgatcctg
     9121 aagctcaagt attattaagt cgcatggaaa gtgatttaat gcagcatatt attgatttag
     9181 atgaaggaaa ccgtactgaa ttcaaatgga aaaatgaatc tattgtaggg gtcatgttgg
     9241 cttcaaaagg atatcctgat gcatatgaaa aagggcataa agtaagtggc tttgatttaa
     9301 atgaaaacta ttttgttagt ggattaaaga agcaaggtga tacctttgtt acttcaggtg
     9361 gtagagttat acttgccatc ggaaaaggtg acaatgtaca tgatgcacag cgagacgcat
     9421 acgaaaaagt atctcaaata caaagtgacc atttattcta tcgtcatgac attgcgaata
     9481 aagcactaca acttaaataa gtatatttaa aaatactaag attagctatg aacgaatcta
     9541 taacgataga ttttttcata gcttttttag ttgtagagtc taggacattg atttctgtac
     9601 caaatttgtg attatgtata tgtaataaaa aagaggcgcc acaacatgtt tggatgaaca
     9661 aaataacatg tttgtggcac ctcttttgtt tagtatggaa taaatggttt tctttttcta
     9721 tacaatgaat ttctaattta gtatctatac aattatggat aaaatttaac ctacacgacc
     9781 aagacgaaca tcatctatgc ccgtgatggg taaggtgatt gaacaataat atgccaaagt
     9841 aataatggca attaaaacta taataaagat tacatcttta tatgagaaag gtacgttgta
     9901 atagtaagta cgaggaccat ctctaaatcc tttcgactcc atcgcaactg ataattgatg
     9961 agcctttcta atgttttggc ttaatagagg tatgattaaa tgcttaaatc gctttaatcc
    10021 tctataattt gctgcgtcta tcatctgata gcgcattttt aaagatctgc gaagctgtat
    10081 taaagaacta atcattaaag gtatcatacg aatggcagcc atgaatgcat aagcaacttt
    10141 tgatttaacc tttaaatgtt gcattaaact ataaaaaatc atgacaacct gagatgtgag
    10201 tgcgattaag ataccgaaaa atgaaatagc aatggttctt aatgaaacat gtaaaccacg
    10261 aactaaactt tctgttgtaa tatggataaa tccgaatttc aaaattgtat ggctaccgtt
    10321 cccgtataaa atcatgaaca gggaagagag taatgcaaag ccaatactta tagttataaa
    10381 aattgctgta attttaaact gagtaccatt aaacatcaat aagaaaacta acattaagat
    10441 agtgatataa agcataaaat cgaaattatg cacaaatata ataaagaaaa atagtataat
    10501 tccaagaaat agtttcgtta taatgttgac atcatcaaca aatgattgcc gaactttcca
    10561 ttgctcatac attcgtatca ccatcacaat ctagtaacgc accatctgaa attttaagtc
    10621 ttcttgatgg ataacgttca attatttcat cgtcatgtgt aaccatgaca atactttgtc
    10681 ccaaattaat tcgtttttgg aaaagtttga tcaactggaa tgtattatgg ctatcaagtc
    10741 caaatgtcgg ttcatctaaa aagatgatat cagctttaga acttagtgcg gtagctacgc
    10801 taaggcgtcg tttttgacca atagacaact cataaggatg ttgatctttt acattttcta
    10861 aatctaaaag ttttaaaagt tgtatcgttt catcatcact ttgatcttta gaaaggtgat
    10921 taaaatgaat gttaatttca tcataaaccg aatttgttat aaattgtaat tctgggtttt
    10981 gataaactag atacatgtgt tttgctgcat gtttaatttt tgttaaacgc tgattttcaa
    11041 aataaacatc accttgatat ttaatcaatt gcataattga ttcaagcaag gttgttttac
    11101 cactaccatt tgcccctgta attgtaatcc actcacctag accaatttct aaatctgaga
    11161 atgagagcaa cgttgattta ccgcgaataa tacgtccatt tttaaattgt aataagtgtg
    11221 agtttgttgt tggaaagtca acacgacttg gtgcgaattc ccatgcacgt ggatgccaca
    11281 caccatattc actgagtaaa tgaacatact tctgtaatat gatttcagga cattcatcgg
    11341 caatgatatt tccgttataa tccatcaaaa tgacgcggtc gacatgattc cagatgtgtt
    11401 taactttatg ttcaacgatt acaacagttt gatcttccca aagttcaatt agtttagtcc
    11461 ataaatcttc cgttgcttga acatctaaca ttgctgtcgg ttcatctaaa aacaatgttt
    11521 ttgattgttg aagaatggtt tcaacaattg ccaatttctg tttcatcccg ccacttaaat
    11581 ctttgatata cgtttcaggg gtaacattta aattgaccat atttaaagca ttgataatta
    11641 acgcatccat gtcttcacgt ggtacttgtc tattttctaa aacgaatgca agttcttcgt
    11701 atacttttgg catacaaaac tggctatcag ggtcttggaa aataacgcca cttaatgggt
    11761 caacgattag ttcatcatat ttcataggta attcaattaa attaggaaca ataccactta
    11821 atacattcag aagtgtactt ttaccgcaac cagaaggacc gagtaaaagt actttttctt
    11881 tgtcttgaat agtgatattt aaatgatcga aaattttacg ctgaccactt ggatatttta
    11941 atcgtaaatc acttactttt aacactctga atgctcctct tataagttgt cgtaatcttc
    12001 tttagcagct ggtctaaata attttgttac gcctgtctta tctaaagctt ttactaaaag
    12061 gtaagatagg acgccggcga ctactgcacc actaattaat ctaaatacga tgaataatgt
    12121 taagttccaa cctgcaactt catttaaata accatagaaa taatctatcg ggaaagccgc
    12181 gattgctgta caaaaacctg ctaacatagc taccataact gaacgagatt gatatttaaa
    12241 aattgcaaag acaagttcac acgctaaacc ttgtataaaa gcgtaaacga ttgtcggaat
    12301 atcgaaacga cccataatga tagtttcgcc ggcacctgca gcaaattcag ccagtaaagc
    12361 aatacctggt tttggaataa ttagatagca gacaatcgct gccatgaacc aaaccccgtt
    12421 tgttaattgt tcgaggtgaa ggcctgtagc ttgcacacca ttgtaaacaa accaccataa
    12481 attgtaaata actgcgaata ctactgaaat aagtacggtt actagtattt cagatagctt
    12541 taaacctttt gacattttta catcctccta ataaaaaaac gcacaaccat ccataggaaa
    12601 gttatgcgtt cacaatatat attagtaaaa catatgtata gtaacacttt cctacgctag
    12661 ttcaagctag atcaggttca aagggtttga gggcaagcct catctcagta taaaacaccc
    12721 ctagtgtgtg cgatttattt aattaattat actgtaagac gtttataaac ttatgtcaat
    12781 aggttgtctt catgaaatgt cgtttaattc gatttaaaat ttataatatt agtattggat
    12841 ttaaattgaa gatgtagtag gaatgttagt aattaaagat ataaaaatat gtgacatgta
    12901 ataatattga gctgataaat gaagaggggt acttatcaat catacctatt taacaacagt
    12961 gaagaatccg tgcataatgg cttatgaatt atagtttgta aggtaaaaga gggatacttg
    13021 cgtcgagcgc aagcaaaaaa gcccctaaca actaaaggtt gtaaggtaaa agagggatac
    13081 ttgcgtcgag cgcaagcata aaagccccta acaactaaaa gttgtaaggg gctctaaatt
    13141 aatttagtgt atcttggata tcttgttttg tttgattaat atcttctgtt ttttcttctt
    13201 ttttatcttt taatttttct tcaacttctt tagctttttc tgctgctttt ttattttgat
    13261 tttcattaga catgattaat tcctcccaaa ttggataatt atttatatat aaatcttacc
    13321 cggttgtact ttcgttaaac ttttctaagt ctatagcact atttattcat ttatctaaag
    13381 acaacaacat tagattaata tataatgatt ttgaggtgaa cataatgtct tttcttagga
    13441 aacacgccga aattattttt agctatttaa tcggtatcgt ttcactcttc actggtctca
    13501 ttattttaat taacttgcca ttaattaaac aattaaatgg tggtaaaaaa gttgatacac
    13561 atgttcataa tgtgcgggaa tttctgaatg catttttcag tgaaattatt aaagtaatga
    13621 gtcgttttat aggtaatttc cctatagtta gtgcaattgt gataattata ttcggtattt
    13681 tagttatgtt gattggtcat acattactta gaactattaa gtatgactat gatatttcta
    13741 tctttttctt agttatcggt atcatgtact ttattattac tcttatatta atgacacaag
    13801 tttatggatt ctttgcagtg attttcatta ttccatttac aattcatata ggatatatcg
    13861 tctataaaga tgaattgaat caggaaaatg taaaaaatca ttacatgtgg ataattgtga
    13921 gttatggtat aagttactta attacacaaa ttgcattgta tggcagaatt gatgctaatg
    13981 aaatagagtc aattgatatc ttaagtgtca atgctttctt tataattatg tggttacttg
    14041 gtcaaatggc tatttggaat ttcttgttct tgcgccgagc tttaccttta acaaagcaag
    14101 aattaggtga agaggagcca gaattatcaa gaacaagtaa agggaatgtc acgaatcaaa
    14161 ctaaaattca cttgaaacaa ctccaagata agactacaga atatgcacgt aagacaagaa
    14221 gaagtgtcga tttagataaa attagagcta aaagagataa attcaaaaag aaagttaatg
    14281 atattatcga tattcaagaa gacgatattc ctgattggat gagaaaaccg aaatgggtta
    14341 aaccaatgta tgtcgaacta ttttgtggtg tcgtcatctt tttattcaca tttttagaat
    14401 ttaataatcg taatgcatta tttgtatctg gtgattggaa attatcacag acacaatatg
    14461 ttattgaatg ggttacatta ctaattctgt tattcattat tatcgcatat atcgctacca
    14521 cgttaacttt ccacttgaaa ggtaagtttt attatttaca actatttatg gggagcattt
    14581 tattctttaa attgttaacg gaatttataa atataatgat tcatggacta ctactttcag
    14641 tgttcattac gccaacatta ctattaatgt tattggcaat catcatttct tattcgttac
    14701 aattacgaga gcgaccataa ttaaaagcat tataaaagta ctatctatta aacattttga
    14761 tgtgtacgct ataagttaga tatatctcta acttatttag atacaggtca atgaagttta
    14821 tggatagtac tttttttgta actagatttg attgattcag gtgatgcgaa ttaagtattg
    14881 aaaattgtat acaaagtttt agtgcaaata aaatagttga aaagttatcc atttgtaaaa
    14941 tcaagaaaac tagtaaatag ttgaagcgac atatggaatt ggcgaaacga tatatagtat
    15001 ttcctgtgta gaaatttaac atatatcatt cgaattacta atttgttaaa atcaacagta
    15061 agattagaag tagatgatat tgaaatttgg caaaaaattt aatctatata aaactacaac
    15121 gaaacacaga aaggaagttg tcagatgaaa atagcaactc tgaacaaagg caaagaaaca
    15181 aaatatttta atggatatcc tttaattgaa gaagaggata tctattcaca agatcattta
    15241 aaagaaggag atatttttca aattgtgact gataaatcac aatatgttgc aacggcttat
    15301 gttggtcgcc aacataaagg attaggttgg gttctaacat acgataaagc tcaagaaatc
    15361 aacacagctt tctttgtgaa attgtttaat actgcattag cagaacgtga ttattatttt
    15421 aatatagatg gaacaaatgc ttttagatta tttaatgctg aaggtgatgg tgttggggga
    15481 ttaacgatcg acaattacga tggccatttg ttgattcaat ggtactcaaa aggtatttat
    15541 aaatttaaat atgccattct tgaagcggtt agaaaagtat ttgattataa atctatttac
    15601 gaaaaagtaa gatttaaaga cagcgaatat agtggtggtt ttgttgaagg cgatgcacct
    15661 gagtttccaa ttgttatcga agaaaacttc acattttata acgtagacct tgaagatggt
    15721 ttgatgacag gtatcttttt agatcaaaaa gaagtgcgca agaaattaag ggatcaatat
    15781 gccaaagaac gccatgtttt aaacttattt agttatacag gtgctttttc tgtaatagca
    15841 gcaagtgagg catcttcaac aacaagtgta gatttggcta atcgttctcg tagtttaact
    15901 gaagaaaatt ttggattaaa tgctattgat cctaaatctc aatatattta tgtcatggac
    15961 acttttgatt tctataaata tgctgcacgt catggacata gttatgacac gatcgtgatt
    16021 gatccaccta gctttgcacg caacaaaaaa cgtacatttt cagtgcaaaa agattatgac
    16081 aaattaatta atggcgcctt aaatatctta tcatctgaag gaacattatt attatgtaca
    16141 aacgcaagtg tatatccatt aaagcaattt aaaaatacta ttaaaaagac acttgaagag
    16201 agtggtgttg attatgaatt aactgaagtt atgggattac caaaagattt taaaacgcat
    16261 ccacattata agccatctaa atatttaaaa gctgtttttg taaatattag acattaattt
    16321 gataaaaagg ggtatagtaa cttattgaga aaaagaaggg tgataatatt atgggattca
    16381 aaaataattt aacgtcaaat ttaactaata aaattggtaa ttcagttttt aaaatagaaa
    16441 acattaatga aaagggtgca atgcctacga caattaaaga attaaatgaa agacgacaac
    16501 gcgctgaagc aattgtaaag agaaagtctt taatgtcatc aacaatgagc gttgttccaa
    16561 ttcctggatt agattttggt gttgatttaa aattaatgaa agatattatc gaagatgtta
    16621 ataaaattta tggtttagat cataagcaag ttaatagcct tggagatgat atgaaagaaa
    16681 gagttatgtc tgcagcagca attcaaggta gtcaatttat tggtaaaaga atttcaagtg
    16741 catttttaaa aatagttatt agagatgtag ctaaacgtac tgctgcaaaa caaacgaaat
    16801 ggttcccggt agtaggacaa gctgtatctg catcaattag ttattatttt atgaataaaa
    16861 ttggaaaaga tcacattcaa aaatgcgaaa atgttattaa aaatgtcatg taggtgctat
    16921 aatagttttg caatttgcaa attttactga aaccggtttt aaacgaattg aatttaaagc
    16981 atggttttgg taaagttaat gtataaaact aagttagtat tgtaataata ttgaagattc
    17041 taactatacg aaggagaaat gtaattatgg aacaaaattc atatgtaatc atcgacgaga
    17101 ctggtattca cgctagacca gcaacaatgt tagtacaaac agcttcaaaa ttcgattctg
    17161 atattcaatt agaatataac ggtaagaaag ttaacttaaa atcaatcatg ggtgttatga
    17221 gccttggtgt tggtaaagat gctgaaatta caatttatgc agacggtagt gatgaatctg
    17281 acgccattca agcaatcagt gacgtcttat caaaagaagg attgactaaa taatcatgtc
    17341 taaattaatt aaaggtattg ccgcatctga tggtgtcgca attgctaaag cttatttatt
    17401 agttgagcca gacttaacat tcgacaaaaa tgaaaaagtc actgatgttg aaggagaagt
    17461 tgcaaagttc aatagcgcta tcgaagcttc taaagttgag ttaactaaaa ttagaaataa
    17521 tgcagaggtt caactaggtg ctgataaagc tgctatcttt gatgcacatt tattagtttt
    17581 agatgaccct gaattaattc aaccaatcca agataagatt aaaaatgaaa acgctaatgc
    17641 tgctacagca ttaacggatg taacaacaca atttgttaca atttttgaat ctatggataa
    17701 cgaatacatg aaagaacgtg cggctgatat tcgcgacgtt tctaaacgtg tgttatcaca
    17761 tattttaggt gtagaattac cgaatccgag tatgattgat gaaagcgttg ttattgtagg
    17821 gaatgactta acgccatctg atactgctca attaaataaa gaatttgtac aaggttttgc
    17881 tacaaacatt ggcggaagaa caagtcactc tgcgattatg agtcgttctt tagaaattcc
    17941 agcaattgtt ggtacaaaat caattactca agaagttaaa caaggcgaca tgattatcgt
    18001 agatggatta aatggtgatg taatcgttaa tccaactgaa gatgagttaa tcgcttatca
    18061 agataaacgt gagcgttatt ttgctgacaa gaaagaatta caaaaactac gtgatgctga
    18121 tactgttaca gttgatggtg ttcacgcaga gcttgctgca aatattggta cacctaatga
    18181 tttgccaggt gttattgaaa atggtgcaca aggtatcggt ttatatagaa ctgagttttt
    18241 atatatgggt cgtgaccaaa tgcctacaga agaagagcaa tttgaagctt ataaagaagt
    18301 attagaagca atgaacggta aacgtgttgt tgtacgtact ttagatatag gtggagataa
    18361 agaattatca tacttaaact tgcctgaaga aatgaatcca ttcttaggtt atcgtgcgat
    18421 tcgcttatgc cttgctcaac aagatatttt cagaccacaa ctacgtgcat tattacgtgc
    18481 atcggtttat ggtaagttaa atatcatgtt cccaatggtt gcaacaatta acgaatttag
    18541 agaagctaaa gctatattat tagaagaaaa agaaaacctt aaaaatgaag gtcatgacat
    18601 ttcagatgat atagaattag gaatcatggt agagatacct gcaacagcag cattagctga
    18661 tgtctttgcc aaagaagtag atttcttcag tatcggtaca aatgatttaa ttcaatacac
    18721 attagctgct gatcgtatgt cagagcgtgt atcatatcta taccaaccat ataacccttc
    18781 aatcttacgt ttagttaaac aagttattga agcgtcacat aaagaaggta aatggacagg
    18841 tatgtgtggt gaaatggctg gagatgaaac agctattcca ttattacttg gtttaggttt
    18901 agatgagttc tctatgagtg caacgtctat tctgaaagca agaagacaaa ttaatggttt
    18961 aagtaaaaat gaaatgactg aacttgctaa ccgtgcagtc gactgtgcaa cgcaagaaga
    19021 agttattgaa ttagttaaca actacgtaaa ataattaatt ctttcgaaag acagaattat
    19081 aaataaaccc gaagtattca ttgtgagtaa ttatgaatac ttcgggttct tttttatgat
    19141 ttatgttaat ttcaatggaa tgttgttgct aactaattaa aaaactatgt gtcattaaca
    19201 aaatgttgtt ctttaattaa tgttagttaa tttaaaaatc gatatttaat ttatgatagc
    19261 taaaaatgat gaagttgatt tagatgaaaa ttaatcttgg atatttaata ctttgttgat
    19321 ttcatcaaga tcaacatggt acattggatt gccattcaac aaaataaacg gagttgaaaa
    19381 agcatcaaaa tctatcattt cgtttcgata ttgttgattg ttgatatttc tttcttcaaa
    19441 aacaatttga tgctcagtta gataattttt tacaaatgta caaggtggac aatcattctg
    19501 cgtataaacg attatttctg acatgtatca tgctccttcg tgctttattc taatgtaata
    19561 tacacaatta tacattgaaa ttcaaatttg tgaacacatt gtgaactgac ataaattata
    19621 cacaatttca tagcgcataa tgttttaaaa atacacatta tagcaattat aattaagttc
    19681 attgtgttgt catcaaaaaa agaaaaaggt gatgttttta aatggataca gttgaaatca
    19741 gtcggttttt gacagctatg actttagcag ttcatatcat ttttgcaacg attggtgttg
    19801 gtatgccttt aatgttcgca attgcagaat ttttaggtat tcgcaaaaat gatcttcaat
    19861 atatagctat ggccaaaaga tgggctaaag cttatacaat tactgtagca gtgggagttg
    19921 ttacaggtac aattataggg cttcaattat cattgatttg gcctacattt atggaaatgg
    19981 gtggacacgt tattgcactt ccattattta tgg
//
LOCUS       DALMNS010000051        19568 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.051, whole genome shotgun sequence.
ACCESSION   DALMNS010000051 DALMNS010000000
VERSION     DALMNS010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19568)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19568)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19568
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.051"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            222..377
                     /locus_tag="O6Y56_001491"
     CDS             222..377
                     /locus_tag="O6Y56_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574746.1"
                     /translation="MFYFTLSKQNTHSEKLNFSLIANINKIDTKLFERLLKLWSKNAT
                     INEKYYQ"
     gene            416..1387
                     /locus_tag="O6Y56_001492"
     CDS             416..1387
                     /locus_tag="O6Y56_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5574747.1"
                     /translation="MKYLLKGNILLLLLILLTIISLFIGVSELSIKDLLHLTESQRNI
                     LFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVSPTTAGTMEWAKLGILIALLFFP
                     TGHILLKLVFAVICSICGTFLFVKIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLR
                     TNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGL
                     SYEKLINIALFITATITALVVVTVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGA
                     IFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNYAQQ"
     gene            1374..2330
                     /locus_tag="O6Y56_001493"
     CDS             1374..2330
                     /locus_tag="O6Y56_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDB5574748.1"
                     /translation="MRNNNKKIMLLIAVTLLISMLYLFVGIDFEIFEYQFSSRLRKFI
                     LIILVGAAIATSVVIFQAITNNRLLTPSIMGLDAVYLFIKVLPVFLFGIQSVWVTNVY
                     LNFIITLITMVLFALILFQGIFKIGHFSIYFILLIGVLLGTFFRSITGFIQLIMDPES
                     FLAIQSSMFANFNASNSNLVTFSAVLLVILLVITIFLLPYLDVLLLGRAEAINLGISY
                     EKLTRILLVIVSVLVSVSTALVGPITFLGLLTVNLAHELMKTYEHKYILIATICLSWI
                     SLFSAQWVVENVFEATTEMSILIDLIGGSYFIYLLVRRRNAQ"
     gene            2327..3088
                     /locus_tag="O6Y56_001494"
     CDS             2327..3088
                     /locus_tag="O6Y56_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574749.1"
                     /translation="MIQVGNLTKTINNQTILEDISIDIEKGKLTSLIGPNGAGKSTLL
                     SAICRLIRFDNGEVKIDGQLMSDYKNNDLSKKISILKQTNHTEMNITVEQLVNFGRFP
                     YSKGRLTKEDHDIVNDALDLLQLQDIRNRNIKSLSGGQRQRAYIAMTIAQDTEYILLD
                     EPLNNLDMKHAVQIMQTLKMLAHKMNKAIVIVLHDINFASCYSDQIVALKNGQLVKSD
                     LKDNVIQSSVLSDLYDMDIQIEHIRNQRICLYFKD"
     gene            3207..4235
                     /locus_tag="O6Y56_001495"
     CDS             3207..4235
                     /locus_tag="O6Y56_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HDB5574750.1"
                     /translation="MKKTVLYLVVAVMFLLAACGNNSDKEQSKSETKGSKDTVKIENN
                     YKMRGEKKDGSDAKKVKETVEVPKNPKNAVVLDYGALDVMKEMGLSDKVKALPKGEGG
                     KSLPNFLESFKDDKYTNVGNLKEVNFDKIAATKPEVIFISGRTANQKNLDEFKKAAPK
                     AKIVYVGADEKNLISSMKQNTENIGKIYDKEDKAKELNKDLDNKIASMKDKTKNFNKT
                     VMYLLVNEGELSTFGPKGRFGGLVYDTLGFNAVDKKVSNSNHGQNVSNEYVNKENPDV
                     ILAMDRGQAVSGKSTAKQALNNPVLKNVKAIKEDKVYNLDPKLWYFAAGSTTTTIKQI
                     EELDKVVK"
     gene            complement(4552..4866)
                     /locus_tag="O6Y56_001496"
     CDS             complement(4552..4866)
                     /locus_tag="O6Y56_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574751.1"
                     /translation="MPKVYGSLIDTETRCRHYFTEEDIIAIKFKCCNKYYPCYKCHNE
                     FEKHAIKRWSEPSFNEKAILCGVCKHELTINEYMMVERCPNCQSRFNNRCKYHYHIYF
                     EI"
     gene            complement(4884..5807)
                     /locus_tag="O6Y56_001497"
     CDS             complement(4884..5807)
                     /locus_tag="O6Y56_001497"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDB5574752.1"
                     /translation="MINKDIYQALQQLIPNEKIKVDEPLKRYTYTKTGGNADFYITPT
                     KNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGIVISLLSLDHIEVSDDAIIAG
                     SGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQ
                     GSLIKLTTKELELDYRNSIIQKEHLVVLEAAFTLAPGKMTEIQAKMDDLTERRESKQP
                     LEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYEN
                     LIHYVQKTVKEKFGIELNREVRIIGEHPKES"
     gene            complement(5934..6452)
                     /locus_tag="O6Y56_001498"
     CDS             complement(5934..6452)
                     /locus_tag="O6Y56_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrpB family protein"
                     /protein_id="HDB5574753.1"
                     /translation="MYSNVQPFINSDLTNCFQSQYTEIESLLFNLLDSPVKYTKHIGG
                     THHFKYSTEPILDILVGVENLHDITSLDEKRLNYVGFYRLHHKYNKKVMMAKFNNFHE
                     LKQQVRLHIIQMNTQTFESYLALDNLLSTNDDIALQFNTKKHQILQHSLTIRQYEMQK
                     QQYFEKLCKKYL"
     gene            6572..7450
                     /locus_tag="O6Y56_001499"
     CDS             6572..7450
                     /locus_tag="O6Y56_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EMYY motif lipoprotein"
                     /protein_id="HDB5574754.1"
                     /translation="MKKIVIIAVLAILFVVISACGNKEKEAQHQFTKQFKDVEQKQKE
                     LQHVMDNIHLKEIDHLSKTDTTDKNSKEFKALQEDVKNHLIPKFEAYYKSAKNLPDDT
                     MKVKKLKKEYMTLANEKKDAIYQLKKFIGLCNQSIKYNEDILDYTKQFEKNRYKVESE
                     IKLADNKSEAANLTTKLEHNNKALRDTAKKNLDDSKENEVKGAIKNHIMPMIEKQITD
                     INQTNISDKHVNNARKNAIEMYYSLQNYYNTRIETIKVSEKLSKVDVDKLPKKGIDIT
                     HGDKAFEKKLEKLEEK"
     gene            7604..7924
                     /gene="ytxJ"
                     /locus_tag="O6Y56_001500"
     CDS             7604..7924
                     /gene="ytxJ"
                     /locus_tag="O6Y56_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol system redox-active protein YtxJ"
                     /protein_id="HDB5574755.1"
                     /translation="MAIKLSSIDQFEQVIEENKYVFILKHSETCPISANAYDQFNKFL
                     YERDMDGYYLIVQQECDLSDYIAKKTNVKHESPQAFYFVNGEMVWNRDHGDINVSSLA
                     QAEE"
     gene            8349..9473
                     /locus_tag="O6Y56_001501"
     CDS             8349..9473
                     /locus_tag="O6Y56_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HDB5574756.1"
                     /translation="MKVLVAMDEFHGIISSYQANRYVEEAVASQIETADVVQVPLFNG
                     RHELLDSVFLWQSGQKYRIPVHDADMNEVEGVYGQTDTGMTVIEGNLFLKGKKPIVER
                     TSYGLGEMINHALDNDAKHVVISLGGIDSFDAGAGMLQALGAQFYDDEGRVVDMRQGA
                     GVIKYIRRMDMSNLHPKMETARIQVMSDFSSRLYGKQSEIMQTYDAHQLNHNQAAEID
                     NLIWYFSELFKSELKIAIGPVERGGAGGGIAAVLNGLYQAEILTSHALVDQLTHLENL
                     VEQADLIIFGEGLNENDQLLETTTLRIAELCHKHQKVAIAICATAEKFDLFESQGVTA
                     MFNTFIDMPETYTDFKMGLQIRHYTVQSLKLLKTHFNVEV"
     gene            complement(9662..10888)
                     /gene="pepT"
                     /locus_tag="O6Y56_001502"
     CDS             complement(9662..10888)
                     /gene="pepT"
                     /locus_tag="O6Y56_001502"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HDB5574757.1"
                     /translation="MKNQLIDRLTRYTTIDTQSDPKSTTTPSTEKQWDLLHLLEKELQ
                     QLGLPTDLDENGYLFATLESNIDADVPTVGFLAHVDTSPDFNASNVKPQIIENYDGKP
                     YKLGNTKRVLDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPE
                     IKHGTIRIGFTPDEEIGRGPHKFDVDRFNADFAYTMDGSQYGELQYESFNAAEAVITC
                     HGVNVHPGSAKNAMVNAIRLGEQFDSLLPDSEVPERTEGYEGFYHLMNFEGTVEKATL
                     QYIIRDHDKKQFELRKKRILEIRDDINAHFENYPVKVDISDQYFNMAEKILPLPHIID
                     IPKRVFAKLDIPANTEPIRGGTDGSQLSFMGLPTPNIFTGCGNFHGPYEYASIDVMEK
                     AVQVIIGIVEDIAENN"
     gene            complement(10902..11396)
                     /locus_tag="O6Y56_001503"
     CDS             complement(10902..11396)
                     /locus_tag="O6Y56_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HDB5574758.1"
                     /translation="MLFYLFHFTISFISTVLFSIIFNAPKRLLVACGFVGAIAWTIYQ
                     LTVDLEFGKVGASFLGSLILGLMSHTMSRRYKRPVIIFIVPGIIPLVPGGAAYQATRF
                     LVSNDYTSAVNTFLEVTLISGAIAFGILVSEILYYLYTRIKQLYGKIKGKTYKKSYNM
                     NNRV"
     gene            complement(11414..12175)
                     /locus_tag="O6Y56_001504"
     CDS             complement(11414..12175)
                     /locus_tag="O6Y56_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HDB5574759.1"
                     /translation="MPDSITIIDENKVIDVVLIAGRILLESGAETYRVEDTMNRIAHS
                     YGLHNTYSFVSSTAIIFSLNDRTSTRLIRVQERTTDLEKIALTNSLSRKISNKELTID
                     EAKSEFIHLQHASLQYSFLTNFFAAAIACGFFLFMFGGVASDCWIAVIAGGSAFLTFS
                     FVQRYIQIKFFSEFVAAAVVISIAATFTKLGIATNQDIITIASVMPLVPGILITNAIR
                     DLLAGELLAGMSRGVEAALTAFAIGAGVAIVLLII"
     gene            complement(12371..13441)
                     /locus_tag="O6Y56_001505"
     CDS             complement(12371..13441)
                     /locus_tag="O6Y56_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDB5574760.1"
                     /translation="MFEAFIYNISVIVAGIYLFHRLQYSENKRMVFSKAYVTVLMTIV
                     SLLLSVYPIPYREDYLIHLTFVPLLFLGRFTNMVYTLSATVIVAIVEIVVFNNSIMYG
                     VTLIVIAAVTSAIGPFLKQNDVLSLLILNVVTIIILFGVALVSPIYTLSEVIILIPIS
                     LIITLASAITFVDIWHFFSLVNRYENEDKYDYLTGLGNVKEFDRHLNEISRKAEKEHQ
                     SIALLLIDIDGFKDVNDTYSHKSGDAVLKQMSQLLKNYVPNQFKIFRNGGEEFSVVIH
                     NYSLDQSVKLAENIRSGVEKSSFHLPNKEVIKLSVSIGVGYLTDDDPKSQRKVFKDAD
                     DMVHVAKNQGRNKVMFNPIINL"
     gene            13759..14814
                     /locus_tag="O6Y56_001506"
     CDS             13759..14814
                     /locus_tag="O6Y56_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl/decaprenyl-phosphate
                     alpha-N-acetylglucosaminyl 1-phosphate transferase"
                     /protein_id="HDB5574761.1"
                     /translation="MVTLLLVAVTMIVSLTITPIVIAISKRLNLVDKPNFRKVHTKPI
                     SVMGGTVILFSFLIGIWIGHPIETEIKPLIIGAIIMYVLGLVDDIYDLKPYIKLAGQI
                     AAALVVAFYGVTIDFISLPMGTTIHFGFLSIPITVIWIVAITNAINLIDGLDGLASGV
                     SAIGLITIGFIAILQANIFITMICCVLLGSLIGFLFYNFHPAKIFLGDSGALMIGFII
                     GFLSLLGFKNITIIALFFPIVILAVPFIDTLFAMIRRVKKGQHIMQADKSHLHHKLLA
                     LGYTHRQTVLLIYSISILFSLSSIILYVSPPLGVVLMFVLIIFSIELIVEFTGLIDNN
                     YRPILNLISRKSSHKEE"
     gene            complement(14986..15627)
                     /locus_tag="O6Y56_001507"
     CDS             complement(14986..15627)
                     /locus_tag="O6Y56_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDB5574762.1"
                     /translation="MTQNIITVKKEHIIENVISKSRFIAHIKPVQNEDEAKAFIAAIK
                     KEHKDATHNCSAYTIGPEMNIQKANDDGEPTGTAGVPMLDILKKLDVHNACVVVTRYF
                     GGIKLGGGGLIRAYSGAVRDVIYDIGRVELREAVPCIVTLNYDQTGKFEYELASTHFM
                     LRNQTYTDKVSYYIDVVKSDYEAFINFLNQMTAGNFDLTEETPKQLPFDIPTE"
     gene            15771..16637
                     /gene="fakB1"
                     /locus_tag="O6Y56_001508"
     CDS             15771..16637
                     /gene="fakB1"
                     /locus_tag="O6Y56_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000686350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid kinase binding subunit FakB1"
                     /protein_id="HDB5574763.1"
                     /translation="MKIAVMTDSTSYLSQDLIDKYNIQIAPLSVTFDDGKNFTESNEI
                     AIEEFYNKMASSQTIPTTSQPAIGEWITKYEMLRDQGYTDIIVICLSSGISGSYQSSY
                     QAGEMVEGVNVHAFDSKLAAMIEGCYVLRAIEMVEEGYEPQQIIDDLTNMREHTGAYL
                     IVDDLKNLQKSGRITGAQAWVGTLLKMKPVLKFEDGKIIPEEKVRTKKRAIQTLEKKV
                     LDIVKDFEEVTLFVINGDHFEDGQALYKKLQDDCPSAYQVAYSEFGPVVAAHLGSGGL
                     GLGYVGRKIRLT"
     gene            17001..18083
                     /locus_tag="O6Y56_001509"
     CDS             17001..18083
                     /locus_tag="O6Y56_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDB5574764.1"
                     /translation="MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRM
                     RQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVSPRVDVVVEISKRIKHAFLNEDI
                     DILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
                     VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYR
                     ILQDQINKQRYTLVFFNNIETMIKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHF
                     DVIFTTTILERGFTMTNLDVVVIDAHQYTQEALIQIAGRVGRKLECPTGKVLFFHEGV
                     SMNMIQAKKEIQKMNKLALKRGWIDE"
     gene            18076..18750
                     /locus_tag="O6Y56_001510"
     CDS             18076..18750
                     /locus_tag="O6Y56_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HDB5574765.1"
                     /translation="MNNCLSCGAKLYENITIYNLFKKPNRLCDRCKENWDNIKLDIKA
                     RRCSRCLKHLNQNEAYCLDCKFLSAHFNLMEQLYCQFQYDGLMKEMIHQYKFLKDYYL
                     CELLAHLIEIPQTSYDYIVPIPSSPAHDLSRTFNPVEAVLKAKGIRFDKILKMSNRPK
                     QSHLTKKERLADENPFIIDTELDLNGKEILLVDDIYTTGLTIHRAGCKLYAKNIRKFK
                     VFAFAR"
     gene            18811..19383
                     /gene="raiA"
                     /locus_tag="O6Y56_001511"
     CDS             18811..19383
                     /gene="raiA"
                     /locus_tag="O6Y56_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HDB5574766.1"
                     /translation="MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKV
                     KTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD
                     RGDQEVFVAELQEMQETQVDNDAYDDNEIEIIRSKEFSLKPMDSEEAVLQMNLLGHDF
                     FVFTDRETDGTSIVYRRKDGKYGLIQTSEQ"
BASE COUNT         6893 a         2789 c         3353 g         6533 t
ORIGIN      
        1 ggggccccaa cactgagaat ttcgaaatga aattctacag acaatgcaag ttggggtgtg
       61 ggtctcaaca taaagaaaaa ctttttcttt agaaattatc atttccactc atgtattcct
      121 ttttaagtac acattagctg aggctaatgt taagaatcac tacataatca atcattagta
      181 gtttacatca tttcctctat tcccagatat caaaatctta agtgttctat tttactttaa
      241 gtaaacaaaa tacacattct gaaaaattaa atttcagttt aattgcaaat atcaataaaa
      301 ttgacactaa attatttgaa aggctattga aattatggtc aaaaaacgct actattaatg
      361 agaaatatta tcaatgataa tggttatcat taatttaaag ggagaaaaat ttgtaatgaa
      421 gtatttatta aagggaaata ttttgcttct attactaata ttgttgacaa ttatttcgtt
      481 gtttataggt gtgagtgaac tatcaattaa agatttacta catttaactg agtcacagcg
      541 gaatatttta ttctcaagcc gaataccaag gacgatgagt attttaattg ctggaagttc
      601 gttggcttta gcaggcttga taatgcaaca aatgatgcaa aataagtttg ttagtccgac
      661 tacagctgga acgatggaat gggctaaact aggtatttta attgctttat tgttctttcc
      721 aaccggtcat attttattaa aactagtatt tgctgttatt tgcagtattt gcggtacgtt
      781 tttatttgtt aaaatcattg attttataaa agtgaaagat gtcatttttg tgccgctttt
      841 aggaattatg atggggggga ttgttgcaag tttcacaacc ttcatctcat tgcgcacgaa
      901 tgctgttcaa agcattggta actggcttaa cgggaacttt gccattatca caagtggacg
      961 ctatgaaatt ttatatttaa gtattcctct tttagcattg acatatcttt ttgctaatca
     1021 tttcacgatt gtaggaatgg gtaaagactt tactaataat ttaggtttga gttacgaaaa
     1081 attaattaac atcgcattgt ttattactgc aactattaca gcattagtag tagtgactgt
     1141 tggaacatta ccgttcttag gactagtaat accaaatatt atttcaattt atcgaggtga
     1201 tcatttgaaa aatgctatcc ctcatacgat gatgttaggt gccatctttg tattattttc
     1261 tgatatagtt ggcagaattg ttgtttatcc atatgaaata aatattggtt taacaatagg
     1321 tgtatttgga acaatcattt tccttatctt gcttatgaaa ggtaggaaaa attatgcgca
     1381 acaataataa aaaaataatg cttttaattg cagtaacgtt attaattagt atgctgtact
     1441 tatttgtagg tattgatttt gaaatatttg aatatcaatt ttcaagtcgt ttaagaaagt
     1501 tcatattaat tattttagta ggtgctgcca ttgcaacttc agtggtgatt tttcaagcga
     1561 ttacaaacaa ccgtctattg acaccatcaa taatgggctt agatgcagtt tatttattta
     1621 tcaaagtatt gccagtcttt ttatttggaa ttcaatcggt atgggttact aatgtatatt
     1681 tgaactttat aataacactt ataacgatgg tgttattcgc actaatccta ttccaaggta
     1741 tctttaaaat tggacatttt tcaatttatt ttatcttact tattggtgtc cttttaggaa
     1801 cattttttag aagtattaca ggttttattc aattgattat ggatcctgag tcatttttag
     1861 caatacaaag tagtatgttt gcaaatttta atgcttctaa ttcgaattta gttactttct
     1921 cagcagtgct attagtaatc ttattagtca ttacaatttt tctattgcct tatttagatg
     1981 tattgctttt aggtcgtgct gaagcaatta atcttgggat atcgtatgaa aaattaacgc
     2041 gaattctact tgtaatagtc tcagttttag tttctgtgtc aactgcatta gtaggaccaa
     2101 ttacattttt aggtttatta actgtaaatc tagcgcatga actaatgaag acgtatgaac
     2161 ataagtatat tttaattgcg acaatttgct tgagttggat tagtttattt agtgcgcaat
     2221 gggtagttga aaatgtgttt gaagctacga cagaaatgag tatacttatt gatttgattg
     2281 gtggaagtta tttcatttat ctattagtta gaaggagaaa tgcgcaatga ttcaagttgg
     2341 aaatttaact aaaactataa ataatcaaac gatattggaa gatattagca tagatatcga
     2401 aaaaggtaaa ttgacttctt taattggacc taatggtgcg ggtaagagta cgttactttc
     2461 agcgatatgt aggttaattc gttttgataa cggtgaagtg aaaatagatg gacagctcat
     2521 gtctgattat aaaaataatg acttgtcgaa aaaaatatct atattaaaac aaacaaacca
     2581 tacagaaatg aatattacgg tagagcagtt ggtaaacttt ggacgattcc cttattctaa
     2641 aggtcgtttg acgaaagagg atcatgatat tgtcaatgat gcgctagatt tgttgcaact
     2701 acaagatatc agaaatcgta atattaagtc attatctggt gggcaacgtc agcgtgcata
     2761 cattgcaatg acaatagcac aagatactga atatattttg ctagatgaac cattaaataa
     2821 tttagatatg aagcatgctg ttcaaattat gcaaacgtta aaaatgttag cacataaaat
     2881 gaataaagcg attgtcattg tattacatga tattaacttt gcgtcctgtt attcagatca
     2941 gattgtagca ttgaaaaacg gacaactagt taaatctgat ttgaaagaca atgtcattca
     3001 aagcagtgtt ttaagtgatt tatatgacat ggatattcaa attgaacata taagaaatca
     3061 aaggatttgt ttatacttca aggattgata attaggaaac actttaaagg ggtgatgcac
     3121 caattaaaga aagtttaact ataaagcatt tatttatttt tcacatcaag cacacagatt
     3181 aagccaaaag aggagaaaat tatattatga agaaaacagt cttatattta gtagtagcag
     3241 taatgttttt attagcggca tgcggtaaca attctgataa agaacaatca aaatcagaaa
     3301 ctaaaggttc taaagataca gtaaaaattg aaaataacta taaaatgcgt ggcgagaaaa
     3361 aagatggtag cgatgctaaa aaagttaaag aaactgttga agtaccaaag aaccctaaaa
     3421 atgcagttgt gttagactat ggcgcattag atgtaatgaa agaaatgggc ttatcagaca
     3481 aagtaaaagc attacctaaa ggggaaggcg gtaagtcatt accgaatttc ttagaatcat
     3541 ttaaagatga taaatataca aacgttggta atttaaaaga agtgaatttt gataaaattg
     3601 ctgcgacgaa acccgaagta atctttatct ctggacgtac agctaatcaa aagaatttag
     3661 atgaattcaa aaaagctgca cctaaagcga aaattgttta cgttggtgca gatgaaaaga
     3721 acttaattag ttcaatgaaa caaaatactg aaaatatcgg taaaatatac gataaagaag
     3781 ataaagctaa agaattaaat aaagatttag ataataaaat tgcttcaatg aaagataaaa
     3841 cgaaaaactt caataaaact gttatgtatt tactagttaa cgaaggtgaa ttatcaacat
     3901 ttggacctaa aggtcgtttt ggtggattag tttacgatac attaggattc aatgcagttg
     3961 ataaaaaagt aagtaatagc aatcatggac aaaatgtttc taacgaatat gttaataaag
     4021 aaaatccaga tgttatttta gcgatggata gaggtcaagc ggtaagtggt aaatcaactg
     4081 cgaaacaagc attaaataat cctgtattaa aaaatgttaa agcaattaaa gaagacaaag
     4141 tttataattt agatcctaaa ttatggtact ttgcagctgg atcaactaca actacaatta
     4201 aacaaattga ggaacttgat aaagttgtaa aataatttta aaagagggga acaatggtta
     4261 aaggtcttaa tcattgtttc cctcttttct ttaaaaaagg aaatctggga cgttaatcaa
     4321 tgtcctagac tctaaaatgt tctgttgtca gtcgttggtt gaatgaacat gttcttgtaa
     4381 caagctcatt tcaataccag tgggctccaa acatagagaa attggatttc caatttctac
     4441 agacaataca agttggcggg ccccaaatat agagaatttc aaaaaggaat tctccagaag
     4501 tggtgcttta tcgtgtctgt cccactcctt ataatgtttt ggctatgttg tttaaatttc
     4561 aaaataaata tgatagtgat atttgcagcg attgttaaac cgagattggc aatttggaca
     4621 acgctcaacc atcatatatt cattgattgt taattcgtgt ttgcatacac cgcataagat
     4681 tgctttttcg ttaaatgaag gctcagacca acgcttaatg gcgtgctttt caaactcatt
     4741 atggcactta tagcatggat agtatttatt acaacattta aatttaatag caataatatc
     4801 ttcttcggta aaataatggc gacagcgtgt ttcagtatcg attaatgaac cataaacttt
     4861 aggcatagac aaagctcctt aacttatgat tcctttggat gttcaccaat aatgcgaact
     4921 tcacgattta attcaatgcc aaatttttct ttgacggtct tttgtacata atgaataagg
     4981 ttttcataat ctgtagcagt tccattgtct acatttacca taaaaccagc gtgtttagtt
     5041 gaaacttcaa cgcctccaat acggtgacct tgcaaattag aatcttgtat caatttacct
     5101 gcaaaatggc caggcggtct ttggaataca ctaccacatg aaggatactc taaaggttgt
     5161 ttagattctc tacgttctgt taaatcatcc attttagctt gtatttcagt cattttacca
     5221 ggagctaaag taaatgcagc ttctaataca actaagtgtt ctttttgaat aatgctatta
     5281 cgataatcta attctaattc ttttgttgta agtttaatta acgagccttg ttcgtttacg
     5341 caaagcgcat agtctataca atctttaact tcgccaccat aagcgccagc attcatatac
     5401 acagcaccac caattgaacc tggaatacca catgcaaatt caaggccagt aagtgcgtaa
     5461 tcacgagcaa cacgtgagac atcaataatt gcagcgccgc taccggctat tatcgcatca
     5521 tcagatactt cgatatgatc tagtgataat aaactaatta caatgccacg aataccacct
     5581 tcacggataa taatatttga gccatttcct aaatatgtaa caggaatctc attttgatag
     5641 gcatatttaa caactgcttg tacttcttca tttttagtag gggtaatata aaagtccgca
     5701 ttaccacctg ttttagtata agtgtatcgt tttaaaggtt catcaacttt aattttttca
     5761 tttgggataa gttgttgtaa agcttgatag atgtctttat ttatcacttc tcagtacatc
     5821 ctttctcatg tctttaatat catatagtat tataccaatt ttaaaattca tttgcgaaaa
     5881 ttgaaaagaa agtattagaa ttagtataat tataaaatac ggcattattg tcgttataag
     5941 tattttttac atagtttttc aaagtattgt tgcttttgca tctcatattg tctaattgtt
     6001 aagctatgtt gcaatatttg gtgctttttt gtattgaatt gcaaagcaat atcatcatta
     6061 gttgataaga gattatcaag tgcaagataa gattcaaatg tttgggtatt catttgaatg
     6121 atatgcagac gcacctgttg ttttagttca tgaaaattgt taaacttcgc catcataacc
     6181 tttttattat atttatgatg caaacgataa aaccctacat aatttaagcg tttttcatct
     6241 aaggatgtaa tatcatgcaa attttctaca cctactaaaa tatctaaaat tggctctgtt
     6301 gaatatttaa aatgatgcgt accgccaata tgttttgtat attttactgg gctgtctaag
     6361 aggttgaata ataatgattc aatttcagtg tattgtgatt gaaaacaatt agttaaatca
     6421 ctattaatga atggttgaac atttgaatac atgataaact cctttgatat tgaaaattaa
     6481 tttaatcacg ataaagtctg gaatactata acataattca ttttcataat aaacatgttt
     6541 ttgtataatg aatctgttaa ggagtgcaat catgaaaaaa attgttatta tcgctgtttt
     6601 agcgatttta tttgtagtaa taagtgcttg tggtaataaa gaaaaagagg cacaacatca
     6661 atttactaag caatttaaag atgttgagca aaaacaaaaa gaattacaac atgtcatgga
     6721 taatatacat ttgaaagaaa ttgatcatct aagtaaaact gatacaactg ataaaaatag
     6781 taaagaattt aaggcactac aagaagatgt taaaaaccat ctcataccta aatttgaagc
     6841 atattataag tcagcaaaaa atttgcctga tgatacaatg aaagttaaga aattaaaaaa
     6901 agaatatatg acgcttgcaa atgagaagaa ggatgcgata tatcaattaa aaaaattcat
     6961 aggtttatgt aatcaatcta tcaagtataa cgaagacatt ttagattata cgaaacaatt
     7021 tgaaaaaaac agatacaaag ttgaatcaga aattaaatta gctgataata aaagtgaagc
     7081 agctaatctt acgacaaaat tagaacataa taataaagcg ttaagagata ctgcgaaaaa
     7141 gaacctagat gatagtaaag aaaatgaagt aaaaggcgcg attaaaaatc acattatgcc
     7201 aatgattgaa aaacaaatta ccgatattaa ccaaactaat attagtgata agcatgttaa
     7261 taatgcaagg aaaaacgcaa tagaaatgta ttacagtctg cagaactatt ataatacacg
     7321 tattgaaaca ataaaggtta gtgagaagtt atcaaaagtc gatgtagata agttgccgaa
     7381 aaagggtata gatataactc acggcgataa agcctttgaa aaaaagcttg aaaaattaga
     7441 agaaaaataa ctataatcat ttttcaaagt taaaaatttt gaatttatgg ttaacatgtc
     7501 aacttactat gtgtataatg gtaaacattg atattaacta tatgtataaa aatgtcacgc
     7561 agatgctatt taaatgtgat aaatattttt agaggtgaat agagtggcta taaagctaag
     7621 ttcaattgac caatttgaac aggttattga ggaaaataaa tatgttttta tattaaaaca
     7681 tagtgaaact tgtccaatat cggcaaatgc gtacgatcaa tttaataaat ttttatatga
     7741 acgcgatatg gacggttatt atttgattgt ccaacaagaa tgcgatttgt cagattatat
     7801 tgctaaaaaa acgaacgtta aacatgaatc acctcaagca ttttattttg taaatggtga
     7861 aatggtttgg aatagagacc acggtgatat taatgtgtcg tcattagcac aagcagaaga
     7921 ataatgaaac tatagggttg gaacattttg ccttacacta ctagacgtga atagcacaac
     7981 ttaaattcgt gtgaatcata gtagtttggc tataatgatg ttctgacctt ttattttata
     8041 taacctttag aagcagttaa gttagtactt ttttacaaac atatgtataa tgtattcgag
     8101 tatttttatt gaaaatattt tggaaaacga cgaatccaat aagaaaattt aaacatgatt
     8161 tgtaagttag tttaatagga aatatatgct aaaccagaag aagtatactg ttatttactg
     8221 gaataattaa taatcatgtc atgttaaatg ttcgcatata atcacgagat aaaatctgaa
     8281 atttaagatt aatcttttat gaataaaaaa cgtatcacaa caaataataa agtaaggtgg
     8341 tcaaggttat gaaagtatta gtagccatgg atgagtttca tggaattatt tcgagttatc
     8401 aagctaatag atatgttgaa gaggcagttg caagccaaat tgaaactgca gatgtagttc
     8461 aagtaccatt gtttaatgga agacatgaat tattagattc tgtattttta tggcaatctg
     8521 ggcaaaaata tcgtatacca gtacatgatg cagatatgaa tgaagttgaa ggtgtttacg
     8581 gacaaactga tacagggatg accgttatcg aggggaattt atttttaaaa ggtaaaaaac
     8641 caattgttga acgaacaagt tatggtttag gagaaatgat taaccatgca ttagataacg
     8701 acgcaaaaca tgttgtaatt tcattaggtg ggattgatag ttttgatgct ggtgcaggta
     8761 tgttacaagc attaggtgct caattctatg atgacgaagg acgtgtcgta gatatgagac
     8821 aaggtgctgg tgtaattaaa tatattcgtc gtatggatat gtcgaactta caccctaaaa
     8881 tggaaacagc aagaattcaa gtaatgtcgg atttttcaag tcgattatat ggtaagcaaa
     8941 gtgaaatcat gcaaacttat gatgcgcatc agttgaatca taatcaagca gcagaaatcg
     9001 ataatttaat ttggtatttt agcgagttat ttaaaagtga attgaaaatt gcaattggtc
     9061 cagttgaacg tggtggtgct ggtggtggaa ttgcagcagt cttgaatgga ctgtatcaag
     9121 ctgaaatatt aaccagtcat gcattagtag accaactaac acatttagaa aatttagttg
     9181 aacaagcgga tttaattatt tttggagaag gattaaatga aaatgatcag ttgctagaaa
     9241 cgacaacatt gcgtattgca gaactttgtc ataaacatca aaaggtagcc attgcaattt
     9301 gtgcaactgc tgaaaagttt gatttatttg aatcacaagg ggttacagca atgtttaata
     9361 cctttatcga tatgccggaa acttatactg actttaaaat gggattacaa attaggcatt
     9421 atactgttca gtctttaaaa ctgttgaaaa cacattttaa tgttgaggtt tagtaaagaa
     9481 ggactaaatt ggtgatgctg tcatgatggt taataacaat tatgatggtt agcaaaacga
     9541 attagaagat tgaaagtata cgtaaaaaat atgaaaaatc acgctatcat tgcactgaat
     9601 gttagcgtga tttttttata ttaattaagc ctgagttgaa ctagtatata atcgttggtt
     9661 tttagttatt ttcagcgata tcttctacaa ttccaatgat tacttgtact gccttttcca
     9721 tgacatcaat ggatgcatat tcatatgggc cgtggaagtt accgcaacct gtaaagatgt
     9781 ttggagttgg taaccccata aatgacaatt gtgaaccatc tgtaccacca cgaataggtt
     9841 cagtgtttgc tggaatatct aatttagcaa agacacgttt aggtatatca ataatatgag
     9901 gcaatggtaa tattttttct gccatattga aatattgatc cgatatatca actttaactg
     9961 gataattttc aaaatgggca ttgatatcgt cacgtatttc taaaatacgt ttcttacgca
    10021 attcgaattg ttttttatca tgatcacgaa taatgtattg caaagttgct ttttcaacag
    10081 ttccttcaaa gttcattaag tgataaaagc cttcgtatcc ttcagtgcgc tccggaactt
    10141 cactatcagg tagcaaacta tcgaattgtt cacctaaacg tattgcgttt accattgcat
    10201 ttttagctga accagggtga acattcacac cgtggcatgt aataaccgct tcagcagcgt
    10261 taaagctttc atattgtaat tctccatatt gactaccatc catagtataa gcaaaatcag
    10321 cattgaagcg gtcaacatca aatttatgtg gaccacgacc gatttcttcg tctggtgtaa
    10381 atccaatgcg aatggtacca tgtttaattt ctggatgttc ttgtaaataa caaatagctt
    10441 ccataatttc cacaataccc gctttatcgt ctgcacctag taacgatgta ccatcagtta
    10501 ccattaatgt atgaccaact aaactgttaa gttctggaaa tactttagga tctaagacac
    10561 gtttagtatt gcctagtttg tatggcttac catcatagtt ttcaataatt tgcggtttaa
    10621 catttgaagc attgaaatca ggtgatgtat caacatgcgc caaaaatcca actgttggga
    10681 cgtcggcatc gatgttactt tctaatgtag caaataagta gccattttca tctaaatcag
    10741 ttggcaatcc taattgttgt aattcttttt ctaataaatg taacaaatcc cattgctttt
    10801 cagttgaagg tgttgttgta gattttggat cagattgcgt atcaattgtc gtatatcttg
    10861 ttaatctatc tatcaattgg ttcttcatta tattcgaccc cttaaactct attattcatg
    10921 ttgtaagatt ttttatatgt cttacctttg attttaccat acagttgttt gatacgtgtg
    10981 tataggtaat atagaatttc agaaactaat ataccgaaag caatcgcacc tgaaatcagt
    11041 gtaacttcta aaaatgtatt tacagcactt gtgtaatcat tcgatactaa aaaacgagtc
    11101 gcttgataag ctgcaccacc aggtactaat ggtataatgc ctggcactat gaatataatt
    11161 accggtcgtt tatatctgcg actcatagta tgactcatta agcctaaaat taagcttccc
    11221 aaaaatgaag cgccaacttt tccaaactct aaatctaccg ttaattggta aatcgtccat
    11281 gcaatggcac ctacaaatcc acatgctact aagagacgtt tgggtgcatt gaaaatgata
    11341 gagaaaagta ctgttgatat aaagctgatt gtaaaatgaa ataaataaaa tagcatgctt
    11401 taacagtcct tccttaaatg attaataaaa cgattgcgac accagcaccg attgcgaatg
    11461 ctgttaatgc agcttcaaca cctcgggaca tacctgcaag taattcaccc gctaataaat
    11521 ctcgaatggc attggtaatt aatataccag ggacaagtgg catgacactg gctatagtaa
    11581 tgatatcttg attggttgca atacctaatt tagtaaatgt ggctgcaatg gatatgacca
    11641 cagcggctgc aacaaactct gagaaaaatt taatttgtat atagcgttgc acaaagctga
    11701 atgttaaaaa tgcggatcca ccagcaatga ctgcaatcca acaatctgat gcgacaccac
    11761 caaacataaa taggaagaag ccacatgcaa tggcagctgc aaagaaattc gttaaaaaag
    11821 aatattgtaa tgatgcatgc tgtaaatgaa taaattcaga tttagcttca tcaattgtga
    11881 gttctttatt tgatatttta cgtgaaagac tattcgttaa agcgattttc tctaaatctg
    11941 ttgtacgctc ttgtacacga attaatcttg tacttgttcg atcgtttaat gaaaaaataa
    12001 ttgcagttga actgacaaaa ctatatgtat tatgaagacc ataactatgt gcgatacggt
    12061 tcattgtatc ttcaactcga tatgtttcag cacctgattc aagtaaaatt ctacctgcaa
    12121 ttaatacaac atcaatcact ttgttttcat ctataattgt gattgaatct ggcatatcaa
    12181 ttcacctcca atgatatgtg ttatttattt gaacaattga agtttacaac ttgttgttgc
    12241 aactttcaat agtgagactt tgtgttagta tgatgaactt gtatggttca aatttaaata
    12301 agaaaaactg ttaatctttg ctattatact atgatttaat aatagcaaag gattaacagt
    12361 tttgtcgttg ttataaattg ataatagggt taaacattac tttgtttcgc ccttgatttt
    12421 tggctacatg caccatatcg tctgcatctt taaacacttt acgctgtgat tttggatcgt
    12481 catctgttag ataaccaaca ccgatagaca ctgacaattt aataacttct ttgtttggta
    12541 aatggaatga tgatttttca acacctgaac gaatattttc agctaattta acactttgat
    12601 caagtgaata gttgtgaatg acaactgaga actcttcgcc accatttcta aaaattttaa
    12661 attgattcgg cacatagttt ttaagtaatt gagacatttg ttttaataca gcatcacctg
    12721 atttgtgtga gtaggtatca ttgacatctt taaatccatc gatatcgatt aataataatg
    12781 cgatactttg atgttctttt tcagcttttc gtgaaatttc atttaaatgt ctatcaaatt
    12841 cttttacatt acctaagcct gttaagtaat catatttatc ttcgttttca taacgattta
    12901 cgagtgagaa gaaatgccaa atatcgacaa atgttatcgc tgaagctaaa gtgataatta
    12961 atgaaattgg tattaaaatg ataacttccg atagtgtgta aataggactc actaatgcga
    13021 caccaaataa aatgattatt gtaacaacat taagtattaa taatgatagc acatcatttt
    13081 gttttaaaaa tggtccaata gcacttgtta ctgcggcaat aacaatcaac gtaacaccgt
    13141 acataatcga gttgttaaat actacaattt caacaattgc tacaattact gtggcagata
    13201 atgtatagac catatttgta aatctaccta aaaacaataa aggaacgaat gttaagtgaa
    13261 ttaaataatc ttcacgataa gggatagggt agacagataa taataatgat acgattgtca
    13321 ttaaaacagt gacataagcc ttagaaaaaa ccatacgttt gttttctgaa tactgtaagc
    13381 gatggaataa atagatccca gcgactataa cagatatatt gtatataaat gcttcgaaca
    13441 tgtctgaatc gactccttta attgaccact agctattgta agtgaaaact tacaatttgt
    13501 cattagttta catataaaat taatgtatga tatagacttt gatgttaaaa tgttgcctta
    13561 aatgatatga tgaaaaaatg aataataggc gatatataag aaatgaatcg tatagttgta
    13621 aatatgatat cattgattga gcgaattaat ttataataaa gctataagat atacgtagaa
    13681 aatagatata tcattctata aagacaatat taaataaata taacgttaaa aacaattaat
    13741 atcgatgaag gtgaataaat ggttacatta ttactagttg cagtaacaat gattgtcagt
    13801 ctgacgataa caccaattgt tattgcaata tcgaaaagat taaatttagt tgataaacca
    13861 aattttagaa aagtacacac taaacctatt tcagttatgg gtggtacagt gattctcttt
    13921 tcatttttaa taggtatttg gattggtcat cctattgaaa cagaaatcaa accacttatt
    13981 attggtgcga ttattatgta cgtacttggg cttgtagatg atatctacga tttgaaaccg
    14041 tatataaaat tggctggtca aattgccgct gccttagtag ttgcttttta tggtgtgact
    14101 attgatttta tttcgttgcc aatgggtaca acgattcatt ttggatttct tagtattcca
    14161 attactgtga tttggattgt tgctattaca aatgcaatta acttaattga tggactcgat
    14221 ggtttggcgt cgggtgtttc tgcaataggg ctcattacaa taggattcat tgcaatttta
    14281 caagctaata ttttcataac gatgatttgt tgtgttttat taggctcttt aattgggttt
    14341 ttattttaca atttccatcc tgccaaaata tttttaggtg atagtggggc tttaatgatt
    14401 ggatttatca tcggattcct ttctttactc ggattcaaaa atattacaat tattgcattg
    14461 ttcttcccaa ttgttatctt agcagttcca ttcattgata ctttgttcgc aatgattcga
    14521 cgtgtgaaaa aaggacagca tataatgcaa gctgataaat cgcatttgca tcataaacta
    14581 ttagctttag gctacacaca tagacaaaca gtattattaa tctattcaat ctctatttta
    14641 tttagtcttt cgagcattat cttgtatgta tcgccaccat taggtgttgt attaatgttt
    14701 gtattaatca tatttagtat tgaattaatt gttgaattta caggattaat agataacaac
    14761 taccgaccaa tattaaattt aattagtcgt aagtcatctc ataaagagga atagggaatg
    14821 aaagcatagc tgtatggaat aatttgtatt atatggcttt actctttaca attttttatg
    14881 tattaaattt caaatataaa aaagcactgc cataaacgtg tacttcaatt gtcatttaat
    14941 aatacgcaat tgatatttac cgtcttatga tagtgctttt tatttttatt cagttggtat
    15001 atcgaaaggc aactgctttg gagtttcttc agtcaaatcg aaatttccag cagtcatttg
    15061 atttaaaaag ttaataaacg cttcatagtc acttttaacg acatcgatat agtagcttac
    15121 cttatcagtg taagtttggt ttcttaacat aaaatgagtt gaagctaatt catattcaaa
    15181 tttaccagtt tgatcataat tcagtgttac tatacatggt actgcttctc gtagttcgac
    15241 acgtccgata tcataaatga cgtctctaac agcaccgcta taggcgcgaa ttaaaccgcc
    15301 accacctaat ttaataccac caaaatatct tgttactacg acacacgcat tatgaacatc
    15361 gagctttttt aatatgtcta acattgggac accggcagtt cctgtcggtt caccatcatc
    15421 attcgctttt tgaatattca tttcaggtcc aatagtatat gcagaacaat tatgagtggc
    15481 atctttatgt tcttttttta ttgcagcaat aaatgcttta gcttcatctt cattttgaac
    15541 aggtttgata tgagcaatga atcttgattt actaatcaca ttttcaataa tgtgttcttt
    15601 tttaacagta atgatatttt gtgtcataat aactccttaa ttcataagct taagattatt
    15661 taatcttcat tatacactga aaatgacatg actataaatc gtttgattgc cattttcttt
    15721 ttaactgaaa tattgtatca ttgctatgag tatattttag gaggacgact atgaaaattg
    15781 ctgtgatgac cgattctaca agttatctgt cgcaggactt aatcgataaa tataatattc
    15841 aaatagcgcc attaagtgtg acttttgatg atgggaagaa ctttacagaa agtaatgaaa
    15901 tagcaattga agaattttat aataaaatgg catcgtctca aacgattcca acaacaagcc
    15961 aaccagcaat tggcgaatgg attactaaat atgaaatgtt aagagatcaa ggttacacag
    16021 atatcattgt catttgctta tcaagtggaa ttagtggaag ttatcaatct agttatcaag
    16081 caggggaaat ggttgaaggt gttaatgtac atgcatttga tagtaagctt gcagcaatga
    16141 ttgaaggatg ttatgtatta cgtgctattg aaatggttga agaaggatac gaaccacagc
    16201 aaattattga tgatttaact aatatgcgtg aacacacagg tgcatattta attgttgatg
    16261 acttaaagaa tttacaaaaa agtggtcgaa ttactggtgc tcaagcatgg gttggaacat
    16321 tattgaaaat gaagccagtt cttaagtttg aagatggcaa gattatacca gaagaaaaag
    16381 ttcgtactaa aaagcgtgct attcaaacat tagaaaagaa agtattagat attgtaaaag
    16441 actttgaaga agtaacttta tttgtcataa atggagatca tttcgaagat ggtcaagcgt
    16501 tatacaaaaa gttacaagat gattgtcctt cagcttatca agtagcatac tctgagtttg
    16561 gtccagttgt tgcagcacat ttaggttctg gtggattagg tttaggctat gttggcagaa
    16621 aaataagatt aacataatta taaaatttta ataaaagagt ctatattgta attggaaatt
    16681 atctcttgca tacatggctt taaatgttca tcatttgaaa gtcaaaatgc taaagatata
    16741 agaaaatcat tataatatta ggctcttttt tacgttgaaa tgaggtttta agcattaaac
    16801 attacgggaa attaattcat cctcatactt cacttactaa tgaaaaaatt aaaaaagaag
    16861 taacaggtgt catcaaacaa aattcaaact attattgtgt tcaatgtgaa agtacaaatc
    16921 caaagcattt ttatcaatat gattcctcag tacattccaa gaaaattgta tattgcagaa
    16981 attgtatatc actggggcga atggataatg taacaagata taaaataaca gagagctcgc
    17041 aaagttcatc gcaagcatat tatcatctct catttgaatt gtcagaacag cagtcttatg
    17101 cctcagaaca tattgttcga gccattagaa tgagacaaac gattttgtta tatgcagtaa
    17161 caggtgcagg taagacagaa atgatgtttc aaggcattca atatgcaaga cgacagggag
    17221 ataatatagc tattgtgtca ccacgtgtag atgttgttgt agaaattagt aaacgtatta
    17281 aacacgcatt tcttaatgaa gatatagaca tactacacca gcaatcaagt caacaatttg
    17341 aagggcattt tgttgtatgc acagtgcatc aactttaccg attcaaacag cactttgata
    17401 ctatttttat tgatgaagtc gatgcctttc ctttatcaat ggataaaagt ttacaacaag
    17461 cattgaagtc atcttctaaa gttgaacatg caacgattta tatgacagca acaccaccga
    17521 aacaactttt gtcagagatt ccccacgaaa atataattaa attgccagct cgctttcata
    17581 aaaaatcact tccagttcct aaatatcgct atttcaaact taataataat aagattcaga
    17641 aaatgttata tcgaatttta caagatcaaa ttaataaaca acgttataca ctggtgtttt
    17701 ttaacaatat agaaacaatg attaaaacat tttcggttta taagcagaaa attactaaat
    17761 taacatatgt ccatagcgag gatgtttttc gctttgaaaa agttgaacaa ttaaggaatg
    17821 gacatttcga tgtcattttt actacgacaa tattagaacg tggatttaca atgacaaatt
    17881 tggatgttgt tgttatcgat gcacatcaat atactcaaga ggctttaata caaattgctg
    17941 gacgtgttgg acgaaaatta gaatgtccta ctggaaaagt attgtttttt catgaaggag
    18001 taagtatgaa tatgattcaa gctaaaaaag agattcaaaa gatgaacaaa ttagcattaa
    18061 aaagaggttg gattgatgaa taattgtttg agttgtggtg ctaagttata tgaaaatata
    18121 accatttata atttgttcaa gaaacctaat agattatgtg acagatgcaa agagaattgg
    18181 gacaatatta aacttgatat taaagcaagg cgatgttcaa ggtgcttaaa acacttaaat
    18241 caaaatgaag catattgttt agactgcaag tttctatcgg cacactttaa tttaatggaa
    18301 caattatatt gtcaatttca atatgacggt ttaatgaaag agatgataca tcagtataaa
    18361 tttttgaaag actattattt atgtgaatta ttggcacatt tgattgaaat accacaaaca
    18421 tcttatgact atattgtgcc aattccttct tcgccggcac atgatttatc tagaacattt
    18481 aacccggtag aagcagtact aaaagctaaa gggattcgct ttgataagat tttaaagatg
    18541 tcaaatagac ctaaacagtc tcatttaact aagaaagagc gtctggcaga tgaaaatcca
    18601 tttattattg atacggaatt agatttaaat ggcaaggaaa tattactcgt tgacgatatt
    18661 tatacaactg gattaacaat tcatcgtgca gggtgtaaat tatatgctaa aaatatcaga
    18721 aaattcaaag tgtttgcgtt tgcacgatag cgtaaaaatg ttaaaatata ataaagagtt
    18781 accaataaag aggtttaagg agagattact atgattagat ttgaaattca tggagataac
    18841 ctcactatca cagatgctat tcgcaactat attgaggaaa aaattggtaa gttggaacgt
    18901 tattttaatg acgtaccaaa tgcagtggcg catgttaaag ttaaaactta ttcaaattca
    18961 gctactaaaa ttgaagtaac aattccattg aaaaatgtta cgttaagagc tgaagagcga
    19021 aacgatgatt tatacgcagg tattgattta attaataata aacttgaaag acaagttcga
    19081 aaatataaaa cacgtattaa tcgtaagagc cgtgatcgag gagatcaaga agtgtttgtt
    19141 gccgaattac aagaaatgca agaaacacaa gttgataatg acgcttacga tgataacgag
    19201 atagaaatta ttcgttcaaa agaattcagc ttaaaaccaa tggattcaga agaagcggta
    19261 ttacaaatga atctattagg tcatgacttc tttgtattca cagacagaga aactgatgga
    19321 acaagtatcg tttaccgccg taaagacggt aaatatggct tgattcaaac tagtgaacaa
    19381 taaattaagt ttaaagcact tgtgtttttg cacaagtgct tttttatact ccaaaagcaa
    19441 tttctgacta tttcatagtt cgataatgta atttgttgaa tgaaacatag tgactatgct
    19501 aatgttaatg gatgtatata tttgaatgtt aagttaataa tagtatgtca gtctattgta
    19561 tagtccga
//
LOCUS       DALMNS010000052        19433 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.052, whole genome shotgun sequence.
ACCESSION   DALMNS010000052 DALMNS010000000
VERSION     DALMNS010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19433
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.052"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..383
                     /locus_tag="O6Y56_001512"
     CDS             <1..383
                     /locus_tag="O6Y56_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDB5574767.1"
                     /translation="ITEERLIFVTNKEMKDFKLNDIQNHTLLVTEKGCSYREQLEKIL
                     YKYSFSTKQMIEFLGIESLKKHLKNSDGIALLPEFIVADELENKSLFQIDVDVDITNL
                     ETTLIINPESSKQVLESFVKDVFL"
     gene            974..4126
                     /locus_tag="O6Y56_001513"
     CDS             974..4126
                     /locus_tag="O6Y56_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA2/NAM7 family helicase"
                     /protein_id="HDB5574768.1"
                     /translation="MNQLVNDTLSAWLLIESLSPGEVSFTAEDILLAENFKNGAKQAQ
                     LQSFDEYFEIWNDERFIISEEKSEIGEIIFKFYRHCFLYNEINLKIQDIFDDYSDIHN
                     PNETHCYGYTFNIDKHGKVIVDSIHIPMIMSALKEIEKNKNANIEEKFNDSVEKFVQK
                     VKEILADEPINEFKLKKIDKAYDEYFSVLNSKKDGLFAHYVAIEYVKDSDLPQPEFNS
                     FFISDIEKARKSPNQTLIDYIEGVEESQRIEVDENKEMFDKFLHPSRLPDGRWPSQTE
                     FRLSLMQQLAVNQITSGNERISSVNGPPGTGKTTLLKDIFAHLVVERGKELAKLNNPK
                     DAFVKTKIHETDDKYVYLLQESIAKYKMVVASSNNGAVENISKDLPKIEEIIRNPEKC
                     KFPEYETAYANLAYELKDFAEIAEDLIGESAWGLFSGVFGKSTNINQVLDHMLKQDVN
                     DIGFARLLQNENNRMGYHELMTEWQAHQRAFLEELKHVEMLKEESIRAYDVYKSCESY
                     SKMEHELNSKKMNVKEKLNHLEIQISCDNKEIEDLDDRINYNTKQIETLNELIKSIKE
                     SNKGFINKLKAMFNSEEDESYKDHNKEKQQLLTQQLELEKCKKNKHEDLVSKLKEKEK
                     LIKQLTKVQLQLDELNSQLQELEAYRIESKITIPEKDFWSDNNYDERQVTNLWTSDEL
                     QYRRAMLFLRAMILHKLLLIANNTTIYYAINDFKDRRKLIDANPDKVHNAWNVMHLIF
                     PVVSTTFASFKSMYGGIPKDFIDYLFIDEAGQAIPQAAVGALYRSKKVVAVGDPIQIE
                     PVVTLESHLIDNIRKNYHVPEYLVSKEASVQSVADNANQYGFWKSDATDSNQKTWIGI
                     PLWVHRRCLKPMFTIANQIAYNNKMVLPSNITNVGKTGWYDVKGNSVQKQFVKEHGEK
                     VVGLLADDWIEAIKEGKNEPSSFVISPFSAVQQQIKRMLKQQLPTRIDIERTKINQWV
                     DKSIGTVHTFQGKEAQKVYFVIGTDNTQDGAVNWSCEKPNLLNVAVTRAKKEFYVIGD
                     MQRIQSKPFYETIFKERNVK"
     gene            4216..4698
                     /locus_tag="O6Y56_001514"
     CDS             4216..4698
                     /locus_tag="O6Y56_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574769.1"
                     /translation="MKKFNNWILNAISGSQTDKNGTTEELKGAKFIILYAYSMLVLLA
                     IVISNIFIHILEPKLSITTQIIIVLILIESLIGLRFFKGYDVRRGKDKENKKNSKDFV
                     KLKSILVAILFTSLALTAGTVADIYGFTDLGNTRSDLIVWSIGGIIFGLVCYTMEDKK
                     "
     gene            4903..5889
                     /locus_tag="O6Y56_001515"
     CDS             4903..5889
                     /locus_tag="O6Y56_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylinositol-specific phospholipase C"
                     /protein_id="HDB5574770.1"
                     /translation="MKKCIKTLFLSIILVVMSGLYHSAHASDSLSKSPENWMSKLDES
                     KRLTEINIPGSHDSGSFTLTDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMI
                     SVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYY
                     YNNPQYQNLFYTGSNANPTLKETKGKIVLFNRMGGTYIKSGYGADTSGIQWADNATFE
                     TKINNGSLNLQVQDEYKDYYDKKVEAVKNLLAKAKTDSNKDNVYVNFLSVASGGSAFN
                     STYNYASHINPEIAKTIKANGKARTGWLIVDYAGYPWPGYDDIVSEIIDSNK"
     gene            6110..6878
                     /locus_tag="O6Y56_001516"
                     /pseudo
     CDS             6110..6878
                     /locus_tag="O6Y56_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498659.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
     gene            6976..9213
                     /locus_tag="O6Y56_001517"
     CDS             6976..9213
                     /locus_tag="O6Y56_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020808042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDB5574771.1"
                     /translation="MQRDYLIRVETESMSDFKRLNGLMIGFVIKGEAHIYDENNMTQC
                     NSGDIFIINHRDLYRFQLQQDGIICYIQFQMKYLADKFDDVHCLYFHLTDATTTKNIH
                     QLRNIMARLVSTHIRHNELSKLTEQQLVIQLLMHMIHYVPRTYHSNQSILNDDKVNQV
                     CDYIELHFHEDLSLSELSEYVGWSESHLSKKFAESLGVGFQHFLNTTRIEHAKLDLTY
                     TDETITDIALQNGFSSAASFARTFKHFTHQTPKQYRGDRPAITENQQSAQHNYHDREL
                     ILLLNDYIEEMNHFIEDIEKVNYKEITFQPTNHQLNQFNHIIQVGYLRNLLNTQYQSQ
                     LLTCHHDFRVNEVLAYDVMPYIMKKLNAPFTYDAEISNIFYDIDLCLDFLLDHNFSLT
                     MHLDQYDSRDYIDAFKIFIHHVALHVSHRKDLKFNLYVTTLHTSLIEMIDYFKALFPN
                     GGLYIHLDQATERHLPLLKRLEPHIDHFVFDANSNDAVDFNKMNDDEFKTASQMIINK
                     TNYLIDLMHRHHLKRPLILLNWNTLTGDTFITNGEYFRGGIIIEQLLKLSSKVEGIGY
                     WLNYDLHVSHCRNERDYMNSIELFHQYNGKRLVYFTALLFNKLTSNILYSDDTCIVTG
                     TDSNFQILLYDAKHFNPYLALDNQMNMRATEMIHLNINALEEGMYKIKHFTLDKENGA
                     LFNLWRKHHTIHGMDKDSIDYVNRMSFPKLEVYDIDVTDTLALNIKMITNGIHLIEVK
                     RYPSS"
     gene            9364..10542
                     /locus_tag="O6Y56_001518"
     CDS             9364..10542
                     /locus_tag="O6Y56_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDB5574772.1"
                     /translation="MNQQLIEALKSKEDKMIEIRRYLHQHPELSFHEDETARYIAEFY
                     KGKDVEVETNVGPRGIKVTIDSGKPGKTLAIRADFDALPITEDTGLSFASQNKGVMHA
                     CGHDAHTAYMLVLAETLAEMKDSFTGKVVVIHQPAEEVPPGGAKAMIENGVLDGVDHV
                     LGVHVMSTMKTGNVYYRPGYVQTGRAFFKLKVQGKGGHGSSPHMANDAIVAGSYFVTA
                     LQTVVSRRLSPFETGVVTIGSFDGKGQFNVIKDVVEIEGDVRGLTDATKATIEKEIKR
                     LSKGLEALYGVTCTLEYNDDYPALYNDPEFTEYVAKTLKEADLEFGVEICEPQPPSED
                     FAYYAKERPSAFIYTGAAVEDGEIYPHHHPKFNISEKSLLISAEAVGTVVLDYLKGDN
                     "
     gene            10544..11932
                     /locus_tag="O6Y56_001519"
     CDS             10544..11932
                     /locus_tag="O6Y56_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5574773.1"
                     /translation="MNETYRGGNKLILGIVLGVITFWLFAQSLVNVVPNLQQSFGADM
                     GTISIAVSLTALFSGMFVVGAGGLADKIGRVKMTNIGLLLSIIGSALIIITNLPALLI
                     LGRIIQGVSAACIMPSTLAIMKTYYEGAERQRALSYWSIGSWGGSGICSLFGGAVATT
                     MGWRWIFIFSIIVAVLSMLLIKGTPETKSEVTNTHKFDVAGLIVLVVMLLSLNVVITK
                     GAALGYTSLWFFGLIAIVIVAFFIFLNVEKKVDNPLIDFKLFENKPYTGATISNFLLN
                     GVAGTLIVANTFVQQGLGYTALQAGYLSITYLIMVLLMIRVGEKLLQKMGSKRPMLLG
                     TFIVVIGIALISLVFLPGIFYVISCVVGYLCFGLGLGIYATPSTDTAISNAPLDKVGV
                     ASGIYKMASSLGGAFGVAISGAVYAGAVAATSIHTGAMIALWVNVLMGIMAFIAILFA
                     IPNDDKRVKDAK"
     gene            complement(12421..14082)
                     /locus_tag="O6Y56_001520"
     CDS             complement(12421..14082)
                     /locus_tag="O6Y56_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HDB5574774.1"
                     /translation="MSVTEVIFSFLGGLGIFLYGLKIMGDGLQASAGDRLRDILNKFT
                     SNPVLGVIAGIVVTILIQSSSGTTVITIGLVTAGFMTLKQAIGVIMGANIGTTVTAFI
                     IGIDLGEYAMPILALGAFLIFFFKRSKINNIGRILFGFGSLFFGLEFMGDAVKPLASL
                     DGFKQLMLDMSTNPILAVIVGAGLTALVQSSSATIGILQEFYQQDLISLNAAIPVLLG
                     DNIGTTITAILASLAGSIAAKRAALVHVIFNLIGVIIFTIFLPVVIHLISLLQDVWHL
                     KPAMTIAVSHGIFNITNTLIQLPFVAGLAWIVTKLVPGKDIADDYKPQHLNKDLVYHA
                     PGVALQETQKELQNVGQIVLSMFEDIREITKDDKKLIKKLEQKHQAVETINDSIRNYL
                     VRISTKAITKADVERLAVMFDVNRSILKVAELTEEYVAQLKRQHDEDIRITEDAQRGM
                     DKLFNHVAESFDKAIDMLDVYDKTKKDEIVERSRESFNIEHKLRKGHIKRLNRGECTT
                     KGGLLYIDMIGVLERIGYHSRNVSEALVGLNDDVPTDEEIATTEI"
     gene            complement(14407..16182)
                     /locus_tag="O6Y56_001521"
     CDS             complement(14407..16182)
                     /locus_tag="O6Y56_001521"
                     /EC_number="4.2.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oleate hydratase"
                     /protein_id="HDB5574775.1"
                     /translation="MYYSYGNYEAFARPKKPENVENKSAYLIGSGLASLAAACFLIRD
                     GQMEGSKIHILEELPKAGGSLDGENMPLKGYVVRGGREMENHFECLWDLFRSIPSLEI
                     NHASVLDEFYWLNKEDPNYSRCRVIEKQGQRLVTDGDFTLTKTAIKEILDLCLTNEED
                     LDDVKITDVFSDDFFNSNFWIYWKTMFAFEPWHSAMEMRRYLMRFVHHIGGLADFSAL
                     KFTKYNQYESLVLPMVEYLKSHGVQFEYDVKVEDIKVDVTTSQKIAREILIHRHGNAE
                     SIKLTINDLVFVTNGSITESSTYGDNDTPAPPTDELGGSWTLWKNLARQSPEFGNPDK
                     FCQNIPQKSWFVSATSTTNNKDIIDTIESICKRDPLAGKTVTGGIITINDSAWQISFT
                     INRQQQFKDQPKNEISTWIYALYSDVNGDHIKKPITECSGNEICQEWLYHLGVPTDKI
                     EDLAKHASNTIPVYMPYITSYFMTRAIGDRPLIVPHQSQNLAFIGNFAETERDTVFTT
                     EYSVRTAMEAVYQLLNIDRGIPEVINSTFDLRVLMDAIYELNDHQDLREITKDSKMQK
                     LALAGFLKKIKGTYIESLLKEHKLL"
     gene            complement(16356..17228)
                     /locus_tag="O6Y56_001522"
     CDS             complement(16356..17228)
                     /locus_tag="O6Y56_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDB5574776.1"
                     /translation="MNKLRDTTFLSYLFTIILWGSAFPIIKIALNDFSAESLSAFRLI
                     LATIILLPFVIIKKLPTPELRDIPVIFILGFCGFVIYHTALNFGETLISAGISGILVS
                     TTPIFSSALAYMFLKEHFSKWNWLSSLVAFIGISIISISKDDYTTINVLGVFIILLAS
                     FSESLYFTFQKKYIEKYGFIAFTLYTIMASSPFMLIFIPEIINDIHGATFTSIVSVLY
                     LAIFPTIIPYVLLAYIVKSVGVSDATMSLYLTPIVSLLLSYLLLDELPTTLAIIGGII
                     TLLGVSLSNFFQNT"
     gene            17342..18739
                     /locus_tag="O6Y56_001523"
     CDS             17342..18739
                     /locus_tag="O6Y56_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDB5574777.1"
                     /translation="MTKYKDIASDIRDKIIAGDWFYGMKIPSQRQLAIQYNVNRVTII
                     KSIELLEAEGFIYTKVGSGTYVNDYLNEAHITNKWSEMMLWSSRQRSQYTVQLINKIE
                     TDDSYIHISKGELGQPLMPHIQLKKAMSNTASQIEDLSFGYNNGYGYIKLRDIIVERM
                     SKQGINVGRENVMITSGALHAIQLLSIGFLGQDAIIISNTPSYIHSTNVFEQLNFRHI
                     DVPYNQINEINTIIDRFINFKNKAIYIEPRFNNPTGCSLTNEQKQNIITYSERHNIPI
                     IEDDIFRDIFFSDPTPAIKTFDKLGKVIHISSFSKTIAPAIRIGWIVASEKIIEQLAD
                     VRMQIDYGSSILSQMVVYEMLKNKSYDKHLVKLRYVLKDKRDFMLNILNNLFKDIAHW
                     EVPSGGYFVWLVFKIDIDIKYLFYELLSKEKILINPGYIYGSKEKSIRLSFAFESNEN
                     IKHALYKIYTYVKKV"
     gene            18929..19402
                     /locus_tag="O6Y56_001524"
     CDS             18929..19402
                     /locus_tag="O6Y56_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1648 domain-containing protein"
                     /protein_id="HDB5574778.1"
                     /translation="MSKIRSFTILSLLIYLAMMCYTVVTYSKLPTKVPIHYNLAGDAD
                     NFADKWVLLLINSAFIVIWLIFFIAGRYYERFAKWSHYNHTPREIRAIKLFLSTLNLE
                     IMSYMSIFTVLEIWQIQHHHQFNLLWFNMIFIIIIGLTLVIFCLLPTIHKMRDSQ"
BASE COUNT         6946 a         2809 c         3475 g         6203 t
ORIGIN      
        1 ctataactga agaacgttta atatttgtta ctaacaaaga gatgaaagat ttcaaattaa
       61 acgatattca aaaccataca ttacttgtta ctgaaaaagg gtgtagttac agagaacagt
      121 tagaaaagat tctctataaa tatagctttt caacaaaaca aatgattgaa tttctaggaa
      181 ttgagtcatt gaaaaaacac ttaaaaaatt cagatgggat tgcgctattg ccggagttta
      241 ttgttgcaga tgaattagaa aataaaagtt tgtttcaaat agatgtcgat gtcgatatta
      301 cgaatttaga aacaactttg ataattaatc ctgaatccag taagcaagta ctagaatctt
      361 ttgtaaaaga tgtcttttta taaatattgg tgaaaacgtg tagttatagt gaaacttaaa
      421 gataatcatt tattggaaag gacataggag caattacaat ttccaaacaa ggtacacgag
      481 tgcctctgaa tttatcggca cgcttttaca tagatcaaaa gaacgcgcac taaaataatc
      541 agtttatcta tgtaacttac atcttttata ctacagaagt atttgaatca ccatatttaa
      601 cttttaagtt tgtactacta tgaagtaatc taactaccac tttagtcaat acaaatataa
      661 cggaaagata attaagtgag tgctcattca agggtgctct tttttcatgt atttattgaa
      721 caaaaataaa gatgcttaag aaatttataa aaagttttat aatcatttac tgatattcgt
      781 gaatagttat agtatttgtt caatattgaa ttactggtca tacagatcta ttttaccagt
      841 gagaagtcta caaagaatta ttggatagtt atggtattga taatataaga atatttttga
      901 aaaaactcaa atatggttaa tttatttgtt aaaataacat taagtataaa aacagggaac
      961 aaggtgggtt atcatgaatc aattggtaaa tgatacgtta tcggcttggt tgttgattga
     1021 atctttaagt ccaggagaag ttagttttac agcggaagat atattattag ctgaaaattt
     1081 taaaaatggt gcaaagcaag cacaacttca aagttttgat gaatattttg aaatatggaa
     1141 tgatgaacgc tttattatat cagaagaaaa atcagagatt ggcgaaatca tttttaaatt
     1201 ttacagacat tgtttcctct ataatgaaat taatttgaaa attcaggata tttttgatga
     1261 ttattcagat attcataatc caaatgagac acactgttat ggttacacat ttaatataga
     1321 taaacacggt aaagtgatag ttgattctat acatattccg atgattatga gtgcattgaa
     1381 agaaattgaa aagaacaaaa atgccaatat agaagaaaaa tttaatgatt ctgttgaaaa
     1441 atttgttcaa aaagtaaaag aaattttagc agatgaacca attaatgaat ttaaattgaa
     1501 gaagatagac aaagcttatg atgagtactt ttctgtatta aattcaaaga aagatggatt
     1561 atttgcgcat tatgtagcaa tagaatatgt gaaagatagt gatttaccac agccggaatt
     1621 taacagcttc ttcataagtg atattgagaa agcaagaaaa tctcccaacc aaactttaat
     1681 tgattacatt gaaggtgtag aagaaagtca gcgcatagaa gtagatgaaa ataaagaaat
     1741 gtttgacaaa tttttacatc cttcacgttt gcctgatgga cgctggccat cacagactga
     1801 gtttagattg tctttaatgc aacaacttgc tgtaaaccaa atcacgagtg gtaatgaaag
     1861 aataagttct gttaatgggc caccagggac aggtaagacg actttattaa aagatatatt
     1921 tgctcatcta gtagttgaaa gaggcaaaga gttagccaaa ctaaataatc ctaaagatgc
     1981 atttgtcaaa acaaaaattc atgaaacaga tgataaatac gtctatttac ttcaggaatc
     2041 tattgctaaa tataagatgg tagttgcgtc tagtaataat ggcgctgttg aaaatatatc
     2101 taaagattta ccgaaaattg aagaaattat aagaaatcct gaaaaatgta aattcccgga
     2161 atatgaaaca gcttatgcaa atttagcata tgaattaaaa gattttgctg aaatagctga
     2221 agatttgatt ggggaaagtg cctggggctt attttctggg gtgtttggaa aaagtaccaa
     2281 tattaatcaa gtattggatc acatgttaaa acaagatgtg aatgatattg gctttgctag
     2341 attacttcaa aatgaaaata atcgtatggg ttatcacgag ttaatgactg aatggcaagc
     2401 acatcaacgt gcatttttag aagagttgaa gcatgttgaa atgttaaaag aagaatctat
     2461 tagagcctat gatgtttata aaagttgtga gtcttactct aagatggaac atgaactaaa
     2521 tagcaaaaaa atgaatgtta aggaaaagtt gaatcattta gaaattcaaa tatcttgtga
     2581 caataaagaa attgaagatt tggatgatcg aattaattat aatacaaagc aaatagaaac
     2641 tttaaatgag ttaattaaat ccatcaaaga aagcaacaaa ggttttatta acaaactgaa
     2701 ggcgatgttt aactcagaag aagatgaaag ctataaagat cataataaag agaagcaaca
     2761 attattaaca caacagttag agttagagaa atgtaaaaaa aacaaacatg aagaccttgt
     2821 tagcaaacta aaagaaaaag agaaattaat taaacaatta actaaagtac agttgcaatt
     2881 agacgagtta aattcacagt tacaagagtt agaagcatat cgtattgagt caaaaattac
     2941 aattccagaa aaagattttt ggagtgacaa caattatgat gagcgccaag ttactaattt
     3001 gtggacgagt gacgaacttc aatatagacg tgccatgctc tttttaagag caatgatatt
     3061 gcataaatta ttattgattg ctaataatac aactatttat tatgcgatta atgattttaa
     3121 agatagaaga aaattaattg atgcaaatcc agataaagta cacaacgcat ggaatgtgat
     3181 gcatttaata tttccagtag ttagtacgac gtttgcaagc tttaaatcta tgtatggggg
     3241 cataccaaaa gatttcatag actacttatt tattgatgaa gcaggacaag caatacctca
     3301 agcagctgtg ggagcattat atcgttcaaa aaaagttgta gctgtaggtg atccgattca
     3361 aatagaaccg gttgtgactt tagaaagtca tttaattgat aacattcgta aaaattatca
     3421 tgttccggaa tatctagttt ctaaagaagc ttctgtgcag tctgttgcag acaacgccaa
     3481 tcaatatggc ttttggaaat ctgatgctac tgatagtaat caaaaaacct ggataggcat
     3541 acctttatgg gtgcacagac gatgtttaaa acctatgttc acgatagcta atcaaatcgc
     3601 ttataataat aaaatggtgc tacctagtaa tattacaaac gtaggtaaga ccggttggta
     3661 tgacgttaaa ggaaactcag tacaaaaaca atttgtgaaa gagcatggcg aaaaagtagt
     3721 gggattatta gctgatgatt ggattgaagc aattaaggaa ggtaagaatg aaccgagctc
     3781 atttgtaata tcgccttttt cagcagtaca gcaacagatt aaacgtatgt taaagcaaca
     3841 actaccgact agaattgata ttgaacgtac aaaaattaat caatgggtcg ataaatccat
     3901 tggtactgtt catacttttc aaggtaaaga ggctcagaag gtgtattttg taataggtac
     3961 tgataatacc caagatggtg ctgtgaactg gtcatgcgaa aaaccaaact tgttaaacgt
     4021 tgcagtgaca agagctaaaa aggaatttta tgtaattggt gacatgcaaa gaatacagtc
     4081 gaaaccattt tatgagacga tttttaaaga aagaaatgta aaatgaaatt gaaaataaca
     4141 gcatttctat aggctaatca agtgatactt aataaccgcg caatttatac attttaaaag
     4201 gagtaaaatt gaataatgaa gaaatttaac aactggatat taaatgcaat aagtggatct
     4261 caaacagaca agaatggaac aactgaagaa ttaaaaggcg caaaatttat cattttatat
     4321 gcatattcaa tgctcgtttt gcttgcgata gtaatttcta acatattcat tcacattttg
     4381 gagcctaaat tatcaatcac cactcaaatc atcatcgttt tgattttaat tgaatcacta
     4441 attggactac gtttctttaa agggtacgat gttaggcgtg gcaaagataa agaaaataag
     4501 aaaaatagta aggatttcgt taaactaaaa tcaattttag tagcaatttt atttacatca
     4561 ttggcgctga cagcaggtac tgtagctgat atatacggtt tcactgactt aggaaatact
     4621 agaagtgatt taatcgtttg gagcataggt ggtattatat ttggcctcgt atgttacaca
     4681 atggaagata aaaaataacg ataaggagct ggcgattata aagctagctc cttaaatttt
     4741 acgtacaact ataaagttaa atcacatggt ttgaatcaca tgtcaataat tcccataata
     4801 cattattaaa acatcaatta aataagtttt aaaattttac acatattttt atttaaaaaa
     4861 gatgtataat taatgtatta aatatagaaa gaagttgata ttatgaaaaa gtgtattaag
     4921 actttgtttt taagtatcat tttagtagtg atgagtggtt tatatcattc agcacatgcg
     4981 tcagattcgt tgagtaaaag tccagaaaat tggatgagta aacttgatga aagcaaacgt
     5041 ttaactgaga ttaatatacc gggttcacat gatagtggct cattcacttt aactgatccg
     5101 gtaaaatcag tttgggcaaa gactcaagat aaagattacc ttacacaaat gaagtcagga
     5161 gtcagatttt ttgatattag aggcagagca agtgctgata atatgatttc ggttcatcac
     5221 ggcatggttt atttgcatca tgaactaggg aaatttttag atgatgctaa atattacttg
     5281 agtgcttatc caaatgaaac aattgtgatg tctatgaaaa aggactacga tagcgattct
     5341 aaagttacga agacatttga agagattttt agagaatatt attataataa cccgcaatat
     5401 caaaatcttt tttacacagg aagtaatgcg aatcctactt taaaagaaac aaaaggtaaa
     5461 attgtcctat tcaatagaat gggtggtaca tacataaaga gtggttatgg tgctgacacg
     5521 tcaggtattc aatgggcaga caatgcgaca tttgaaacga aaattaataa tggtagctta
     5581 aatttacaag tacaagatga gtataaagat tactatgata aaaaagttga agctgttaaa
     5641 aatttattgg ctaaagcaaa aacggatagt aacaaagaca atgtatatgt gaatttcttg
     5701 agtgtggcgt ctggaggcag tgcatttaat agtacttata actatgcatc acatataaat
     5761 cctgaaattg caaaaacgat taaagcaaat gggaaagcta gaacgggttg gctgattgtt
     5821 gactatgcag ggtatccgtg gccaggatat gatgatattg taagcgaaat tatagatagt
     5881 aataaataag gattcaataa tgatattaag acgagtatga aaatagttag attctaatta
     5941 ttttcactac tcgtttttat tttgaaaata agtaatgatt caacaatatt ataaattgaa
     6001 cagattgttt gtgaaatttt tgataatatt aaagtgaaaa agtgttataa attgatatta
     6061 atatgtaatt tgcaaaagta aatcatttta aaaagaagag agttgtaagg tgatgaaacg
     6121 attaaataaa ttaatgctag gtattagttt cttattttta acaattttta ttggtggttg
     6181 tggcataggt aaagaagcgg aaattaagaa aagttttgaa aaaacattaa gtatgtatcc
     6241 gattaaaaac ctagaggatt tatatgataa agaaggttat cgtgatgatc agtttgataa
     6301 aaaggataaa gggacgtgga ttattaattc tcaaatggcg actcaaaata aaggaaaagc
     6361 tctaaaaaca aatggaatgc ttttgaaaat aaatagaaat acaagaagtg caaaaggatt
     6421 ttactatgtt aattcgataa agaatgatga ggatggtaga cctcaagata atcaaataga
     6481 atatccggtt aaaatggtcg acaataaaat cattccaact aaagatatca atgacgaaaa
     6541 aataaaaaaa gaaatcgaaa actttaagtt ctttgcgcaa tatggcaact ttaaagattt
     6601 gtcggagtac aaagatggcg atatatcata caatccagag gtgccgagtt attcagccaa
     6661 atatcaatta acgaatgatg attataatgt aaagcaatta cgtaaaagat ttaatatacc
     6721 aacgaataaa gcaccaaagt tattgttgaa aggtacaggt aatttaaaag gctcatcagt
     6781 tggatataaa gatattgaat ttactttcgt ggagaaaaaa aggagaaaat atatacttta
     6841 gtgatagtct acattttaaa ccgagtgagg ataaataacc tcactgcctc ccacacgatt
     6901 caatatgaaa ttcaaatatg ttgctgtaaa ataatgtaaa ataaacgtat tcatattact
     6961 gaattgaggg atagtatgca acgtgattat ttaattcgag tagaaactga gagtatgtca
     7021 gatttcaaaa ggctcaatgg tttaatgatt ggttttgtta ttaaaggtga ggcgcacatt
     7081 tatgatgaaa ataatatgac gcaatgcaac agtggcgaca ttttcatcat taaccaccgc
     7141 gacttgtatc gatttcaact tcaacaagat ggcatcatat gttatatcca atttcaaatg
     7201 aaatatttag cagacaagtt tgatgatgtg cattgtctat attttcactt aacagatgcg
     7261 accacaacaa aaaatataca tcaactgaga aatataatgg caagactggt ttcaacacat
     7321 attcgacata atgagttgtc taaattgact gagcaacaac ttgtgattca gttgcttatg
     7381 catatgattc attatgtccc gcgtacatat cattcgaacc aaagtatctt aaatgatgat
     7441 aaagtgaatc aagtatgcga ctatatcgag ttacattttc atgaagactt aagcctttcg
     7501 gaattaagcg aatatgttgg gtggtcagag agccatctgt ctaaaaagtt tgcagaatcg
     7561 ctaggtgtag gattccagca tttcttaaat acgacgcgaa ttgagcatgc gaaactcgat
     7621 ttgacataca cagatgaaac gattactgat attgcattgc aaaatggctt ttcaagtgca
     7681 gcgagctttg cgagaacatt taaacacttt acgcatcaaa cacctaaaca atatcgaggt
     7741 gatcgtccag caatcactga aaatcaacaa tcggcacaac ataattatca cgaccgtgaa
     7801 ttgatattac ttttaaatga ctacattgaa gaaatgaatc atttcattga agatattgaa
     7861 aaggtgaact ataaagagat tacctttcaa ccaaccaatc accaactaaa tcaatttaat
     7921 catattattc aagtgggcta tttgaggaat ttgctcaata cacagtatca atcacagttg
     7981 cttacatgtc atcatgattt ccgtgtcaat gaagtattag catatgatgt gatgccatat
     8041 atcatgaaaa agctcaatgc gccattcacg tatgatgcag aaatttcgaa tatattttat
     8101 gatatcgatt tgtgcttaga ctttttatta gatcataact ttagtttgac aatgcatttg
     8161 gatcagtatg actcacgtga ttatatcgat gcatttaaaa tttttatcca tcacgttgcc
     8221 ctgcatgtca gtcatagaaa agatttgaag ttcaacttgt atgtgacgac attgcacacg
     8281 tctttgattg aaatgattga ttattttaaa gcattattcc ctaatggtgg cttgtacatt
     8341 cacttagatc aagctacgga aagacatcta ccattgctga aacgacttga gccacacatc
     8401 gaccattttg tatttgatgc caattcaaat gatgctgttg attttaataa aatgaatgat
     8461 gatgaattta aaaccgcaag tcaaatgatt attaataaaa cgaattacct tatcgattta
     8521 atgcatcgtc atcacctaaa gcgtccactc attttactca attggaatac attgacaggt
     8581 gatacattta ttacaaacgg cgaatatttt agaggtggta tcatcattga gcaattatta
     8641 aaattaagtt ctaaagtaga gggtatcggg tattggttga attatgattt gcacgtcagt
     8701 cattgtagaa atgaacggga ttatatgaat tctattgaac tgtttcatca atacaatgga
     8761 aaacgtctgg tctatttcac ggcattgcta tttaataaat taacaagcaa tattttatat
     8821 tctgatgata catgtattgt cacgggaact gattcaaatt ttcaaatatt gttatatgat
     8881 gcaaagcatt ttaatccgta cttagcgttg gacaatcaaa tgaatatgcg tgcaacggaa
     8941 atgatccatt tgaacattaa tgccctagaa gaaggtatgt ataagattaa acattttacc
     9001 ttagataaag aaaacggtgc attatttaat ctttggcgca aacatcatac gatacatggt
     9061 atggacaagg actctataga ttacgttaat cgaatgagtt ttccaaaatt agaagtgtat
     9121 gatatagatg tgacggatac gctggcatta aatattaaaa tgattacaaa tggaattcac
     9181 ttaattgaag taaaacgtta cccaagttca taaaatgatc acaaatcaca atttatgtta
     9241 tacataattt gtgatttttc atattcaaag ttaaaattgc aaaaaattaa tggttaacat
     9301 ctctgttgtt ggcaatataa ataatgatca atcatatatg atgtaactaa ggagatgaat
     9361 gatatgaatc aacaattaat tgaagcttta aaatcaaaag aagacaaaat gattgagatc
     9421 agacgttatt tacatcagca tccagaatta tcttttcatg aggatgaaac ggcgagatac
     9481 atcgctgaat tttacaaagg taaagatgta gaagtagaaa cgaatgtcgg accacgtgga
     9541 attaaagtaa cgattgattc agggaaacct ggtaaaacat tagcaatccg tgcagacttt
     9601 gatgcattac ctattactga agatacagga ttatcttttg catcacaaaa taaaggtgtt
     9661 atgcacgcat gtggtcacga tgcacataca gcatacatgc ttgtattagc agagacgctt
     9721 gctgaaatga aagatagttt tacaggaaaa gtcgttgtga tacatcaacc agctgaagaa
     9781 gtaccaccag gtggtgctaa agcaatgatt gaaaatggtg tattagacgg tgttgatcat
     9841 gtattaggtg tacacgtcat gagcacaatg aaaacaggta atgtgtatta cagacctggt
     9901 tatgttcaaa caggacgcgc atttttcaaa ttgaaagttc aaggtaaagg tggccatggt
     9961 tcatcaccac atatggccaa tgatgccatt gttgcaggta gctacttcgt cacagcgtta
    10021 caaacagttg tatctagacg actaagtcca tttgaaaccg gtgttgtcac aatcggttca
    10081 tttgacggta aaggtcaatt caatgtcatt aaagatgttg ttgaaattga aggtgatgta
    10141 cgtggattaa cagatgctac aaaagcaaca attgaaaaag aaattaaacg tttatcaaaa
    10201 ggattagaag cattgtatgg tgtaacttgc acattagaat ataacgatga ctatcctgca
    10261 ttatacaatg atccagagtt tactgagtac gtggctaaga cgctaaaaga agcagacctt
    10321 gaatttggtg tcgaaatatg tgaaccacaa ccaccttcag aagactttgc atactatgct
    10381 aaggaacgac caagtgcctt tatttataca ggtgcagctg tggaagatgg tgaaatttac
    10441 ccacatcatc atcctaaatt taacatttca gaaaaatcat tacttatttc ggcagaagct
    10501 gtagggacag ttgttttaga ttaccttaaa ggagataact aacatgaatg aaacgtatcg
    10561 cgggggcaac aagttaatct taggtattgt attaggtgtt attacatttt ggttgtttgc
    10621 acaatcactt gtaaatgttg tgccaaattt acaacaaagt tttggtgcag acatgggaac
    10681 aattagtatt gcggtaagtc taaccgcact attttcaggc atgtttgttg ttggagcagg
    10741 cggcctagca gataaaattg gacgcgtgaa aatgacgaat atcggcttat tattaagtat
    10801 tattggttca gcattaatta ttattacaaa tttaccagca ttgttaattt taggtcgtat
    10861 tatacaaggc gtatcagcag cgtgtattat gccttccaca ttggccatta tgaaaactta
    10921 ttatgagggt gctgaacgtc agcgtgcctt aagctactgg tctatcggtt cttggggtgg
    10981 aagtggtatc tgttcactct tcggtggggc agttgcgaca actatgggtt ggagatggat
    11041 tttcatcttc tcaattatcg ttgccgtact ttcaatgtta ctcatcaaag ggacgcctga
    11101 aacgaaatca gaagttacca atacacataa atttgacgtt gcaggtctaa ttgttctagt
    11161 agttatgtta ttaagtttaa acgttgttat tactaaaggt gcagcacttg gttatacatc
    11221 attatggttc tttggtttga ttgcaatcgt aattgtagca ttctttattt tcttaaatgt
    11281 tgagaaaaaa gtagataatc cacttattga ttttaaatta tttgaaaata aaccttatac
    11341 aggtgcaacg atttcgaact tcttattaaa cggtgttgca ggtacattaa ttgtagcgaa
    11401 tacattcgtg caacaaggtt taggttatac agcattgcag gcaggatact tatcaattac
    11461 ttatttaatc atggtgttat tgatgattcg agttggtgaa aaattattac aaaaaatggg
    11521 ttctaagcga ccaatgttat taggtacatt cattgtggtc attggtattg cacttatttc
    11581 attagtattc ttaccaggca tattttatgt tatcagttgt gtcgtaggat atttatgttt
    11641 cggactaggc ttaggtattt atgcaacacc ttctacagat acagctattt cgaatgcacc
    11701 gttagataaa gttggcgttg cttcaggtat ttataaaatg gcttcatcac ttggtggcgc
    11761 attcggtgtc gcaattagtg gtgcagtata tgccggtgca gttgctgcaa cgagcattca
    11821 tacaggtgcg atgattgcac tttgggttaa cgtattaatg ggaatcatgg catttatcgc
    11881 aattttattc gcgattccta atgatgataa acgtgtcaaa gatgcgaaat aataacgatg
    11941 acacgcccag tgttttgata atgatttaaa tgaaagtaaa gcaaattaaa tgaggaaatg
    12001 tatagagcag tgcatataga taaatctatg attgggttaa cactaatata aatataaatg
    12061 aaaaaccatc cacttaaact tttgataagt taggtggatg gttatttatt gcgttgttct
    12121 aaaaatttgg acacttatat ggaaagaact atatataatg tgaagataat ggcaattcgc
    12181 ttcaatgaag gcgacgtgta aaagtgtata ttaaacgttt cggggtcaga ctccgagaac
    12241 aatgtccgtc atgcttaccg catactaatg aagcattatt atatcagtgt ttatagccga
    12301 tttaagataa taaagtttgc taaacaaaaa agccaaccca tgaatgttgg attggctttg
    12361 tataagcata ttaagttcta atttttatat aaggtatgaa tataaataag acattaaaaa
    12421 ttaaatttca gttgttgcaa tttcttcatc tgtaggtaca tcatcgttaa gaccaacaag
    12481 tgcttcagaa acatttcgtg aatgataacc gatacgttca agaacaccaa tcatatcgat
    12541 atatagtaat ccgccttttg ttgtacattc accacgatta aggcgtttaa tatgaccttt
    12601 gcgtagttta tgttcaatat taaatgattc tctactacgt tctacaattt catctttttt
    12661 cgttttgtca taaacatcta acatgtcgat ggctttatca aatgactcag caacatggtt
    12721 gaataattta tccataccac gttgtgcatc ttctgtaatg cgaatatctt catcatgttg
    12781 gcgttttaat tgagcgacat actcttctgt tagctctgct acttttaaaa tagagcgatt
    12841 gacatcaaac ataactgcta aacgctcaac gtctgccttc gtaatggctt ttgtagaaat
    12901 tctaactaaa taatttcgaa tactatcatt gattgtttca acagcttgat gcttttgttc
    12961 aagctttttg atcaattttt tatcgtcttt tgtaatttcg cgaatgtctt caaacattga
    13021 taagacaatc tgacccacat tttgtaattc tttttgagtt tcttgtaatg caacaccagg
    13081 tgcgtgataa acaagatctt tgtttaagtg ctgaggttta tagtcatcag caatatcttt
    13141 acctgggaca agctttgtaa ctatccatgc taaacctgct acaaatggta attgaatcaa
    13201 agtatttgtt atgttgaaga taccatgtga tactgcaatc gtcatcgctg gttttaagtg
    13261 ccatacatct tgtaacaaac taatcaaatg aatcacaact ggcaagaaaa ttgtgaagat
    13321 aattaccccg attaagttaa agatgacgtg tacaagcgcc gcacgttttg cagcgattga
    13381 gccggctaaa ctagctaaga tagctgtaat cgttgtacca atattatcgc ctagtaacac
    13441 agggattgct gcgtttaagc tgattaaatc ttgttgataa aattcttgta aaataccaat
    13501 cgtcgcactt gaactttgaa ctagtgctgt taaccctgcg ccgacaatga cagcgagtat
    13561 tggatttgta gacatatcaa gcattaattg cttaaatcca tctaatgatg ctaaaggttt
    13621 aacggcatca cccataaatt ctagaccgaa aaatagagaa ccgaaaccga atagtatgcg
    13681 gccaatgtta ttgattttag agcgtttaaa gaaaaagatt aaaaatgcac ctaatgctaa
    13741 aattggcatt gcatattcgc ctaaatctat accgataata aatgcagtta ccgttgttcc
    13801 gatattagca cccattatca ctccaatggc ttgtttcaat gtcataaatc cagctgttac
    13861 cagtccgatt gtgataactg ttgtacctga actactttgt attaaaatag ttacaacgat
    13921 acctgcaata acacctaata ctggatttga tgtaaatttg tttaaaatat ctcgtagcct
    13981 gtctcctgct gatgcttgaa gcccgtctcc catgattttt aagccgtaaa ggaaaatacc
    14041 taaaccacct aaaaaggaga aaatgacttc tgtaaccgac atttccatta tttcacctca
    14101 aataagcttt atatttagat tatcgcttat aattgtaaat ttaatgttaa gattaggtaa
    14161 aattatttaa caatatatgt tatttgtata tgacttgtaa aatatcgtca cttattatgt
    14221 aaattttcag tgtgaaatgg caggtttgca atcacttgtt taacaaaatg atgcaatcaa
    14281 tcatacaatt atgtgtcatc aaaaaaatca tgtgagtggg ataacgaaat aaagtttgtg
    14341 aacatatcat ttctttccca ctccatgatt tgaaatcacc atatagacat gatttaatgt
    14401 gcctcgttat aacaatttgt gttcttttaa taatgactca atgtaagtac cttttatctt
    14461 tttaaggaat cctgctaatg cgagtttttg cattttcgaa tctttagtaa tctcgcgcaa
    14521 atcttgatgg tcattcagtt cgtatatggc atccattaag acgcgaagat caaatgtact
    14581 attgatgacc tctggaatac cacgatctat atttagtaat tgataaacag cttccatggc
    14641 agtacgaacc gaatattctg ttgtaaatac agtatctcgc tctgtttctg caaagttacc
    14701 aataaatgct aaattttgtg attggtgcgg aacgattaaa ggtctgtcgc cgatagcacg
    14761 tgtcatgaaa taagaggtaa tatatggcat ataaacagga atcgtattag atgcatgttt
    14821 tgctaagtct tcaattttgt cagttggtac acctaagtga tatagccatt cttgacatat
    14881 ttcattacca ctacattctg tgattggctt tttaatatga tcgccgttta catctgaata
    14941 taaggcgtaa atccacgtag atatttcatt tttaggttgg tctttaaact gttgctgacg
    15001 attgattgta aaactgattt gccatgcaga atcattgatt gtaataatac caccagtaac
    15061 cgttttgcct gcaagtggat cacgtttaca aatgctttct attgtatcga taatatcttt
    15121 attgtttgtt gtcgatgttg ctgaaacaaa ccaacttttt tgaggaatat tttggcaaaa
    15181 cttatcagga ttaccaaatt caggactttg tcgtgctaaa tttttccata gtgtccaact
    15241 accacctaat tcgtcagttg gtggcgctgg tgtatcatta tcaccatacg tagagctttc
    15301 tgtaatacta ccgtttgtca caaagacaag atcgtttata gtcagtttaa tagattctgc
    15361 attaccatgt cggtgaatta atatttctcg ggcaattttt tgacttgtcg taacatctac
    15421 tttaatatct tcgactttta catcgtattc aaattgaacc ccatgcgatt ttaaatattc
    15481 aaccataggt aatactaaag attcatattg attatattta gtgaatttta aagctgaaaa
    15541 gtctgcgaga ccaccaatat gatgaacgaa tcgcattaga tagcgacgca tttccattgc
    15601 agaatgccac ggttcaaatg caaacatcgt tttccagtaa atccaaaagt ttgaattaaa
    15661 gaaatcgtcg gaaaatacat ctgttatttt gacatcatct aaatcttctt cattcgttaa
    15721 gcataaatct aaaatttctt taatcgccgt tttagtcaaa gtgaagtctc catctgtgac
    15781 taaacgttga ccctgcttct caataacacg acaacgagaa tagttagggt cttctttgtt
    15841 taaccaatag aattcatcta atactgacgc atgattaatt tcaagtgaag ggatagatct
    15901 gaataaatcc cacaaacatt caaagtggtt ctccatttca cgaccacctc ggacaacata
    15961 gccttttaaa ggcatatttt caccatcaag actaccgccc gctttgggta actcttctaa
    16021 aatatgaatc ttagaacctt ccatttgacc atcccttatt aaaaaacaag ctgcagcaag
    16081 tgaagctaga ccagatccga ttaagtaagc ggatttgttt tctacatttt caggtttttt
    16141 agggcgcgca aatgcttcat aatttccata actgtaatac atatccacca agtcctttcg
    16201 tattagaata cactcagact ataccccttt gtgaattgca aatattagta tttatattgg
    16261 taaatttgac gaaattagat catttttata tttttgattt ttaaaatttt atcattcgaa
    16321 tgtttttgga ttctgaggtg cgggacttgg aataattatg tattttgaaa gaagttactt
    16381 aaactaacgc ctagtagagt gataattccg cctataatag caagggttgt tggtagctcg
    16441 tctaataaca gataagataa taataaagaa acgataggtg ttaaataaag agacattgtt
    16501 gcatcagaga caccaactga cttcacgata taagcaagca aaacgtatgg aattatagta
    16561 gggaatatag ctaaataaag taccgatact attgatgtaa aagtggcgcc gtgtatatcg
    16621 ttgatgattt caggaataaa aataagcata aatggtgagc ttgccattat tgtatatagt
    16681 gtgaaagcga tgaagccgta tttttctatg tattttttct ggaaagtaaa atacaaactt
    16741 tcactaaaag atgcaagtaa aataataaaa acacctaata cattaatagt tgtgtaatca
    16801 tctttactta ttgaaataat ggatattcct ataaatgcga cgagtgaact taaccaattc
    16861 cattttgaaa aatgctcttt taaaaacata taagctaaag cactagaaaa aataggcgtt
    16921 gtagagacta gaattccaga tatacctgca ctaatcaaag tttcaccaaa atttaaagct
    16981 gtgtgatata tcacaaatcc acaaaatcct aaaataaaaa taacagggat atctcttagt
    17041 tctggggtag gcaatttctt tataattacg aacggcaaga gaattattgt tgctaaaatt
    17101 aaacgaaatg ccgacaatga ttctgcacta aaatcattta acgcaatctt tataattgga
    17161 aatgcagatc cccacaatat gatagtaaat aaatatgata gaaaagtagt gtctcgaagc
    17221 ttattcatta atatcatcac tcctttaatt atgtgtttct atattaaaaa atatgattta
    17281 aaatgagtac aaccaatttt gattagattt acctatccaa tttataaaaa ggggggagaa
    17341 gatgacgaaa tataaagata ttgctagtga catcagagat aaaataatcg caggggattg
    17401 gttttatgga atgaagatac cttcacagag gcagttggcg atacaataca acgtaaatag
    17461 agtgacgatt attaaaagta ttgagttatt agaggctgaa ggatttatct atactaaagt
    17521 ggggagtgga acatatgtta atgactattt gaacgaagca catattacaa ataaatggtc
    17581 tgaaatgatg ttatggtcct ctcgacaaag aagtcagtat acggtgcaat taattaataa
    17641 aattgagaca gatgactcgt atatacatat aagtaaaggt gaattgggtc aaccattaat
    17701 gccacatatt caattgaaaa aagccatgtc taatacagcc agtcaaattg aagacttatc
    17761 ttttggttat aataatggct atggttatat caagttaaga gatatcatcg ttgaacgaat
    17821 gtcaaagcaa ggtataaatg taggtagaga aaatgtaatg atcacttcag gcgctttaca
    17881 tgccattcaa cttttatcta ttgggttttt aggtcaagat gccataataa tttcaaatac
    17941 accatcatat attcactcta caaatgtttt tgagcaattg aattttagac atattgatgt
    18001 tccttataat caaattaatg aaattaatac catcattgat agatttatta attttaaaaa
    18061 taaagcgatt tatatagaac ctaggtttaa taacccgaca ggttgttctt taacgaatga
    18121 gcaaaagcaa aatataatta cttatagcga aagacataat atacctatca ttgaagatga
    18181 tatctttaga gatattttct ttagcgatcc aactcctgct atcaaaactt ttgataaatt
    18241 gggaaaagtt atacatataa gcagtttttc aaaaacgatt gcaccagcaa taagaatagg
    18301 ttggattgtt gcttctgaaa aaataataga gcaattggca gatgtaagaa tgcaaattga
    18361 ctatggatcc agtattttgt cacaaatggt tgtatatgag atgttgaaaa ataagtctta
    18421 tgataaacac ttagtaaagt taaggtatgt tttaaaagac aaacgagact ttatgttaaa
    18481 catcctcaat aatttattta aggatatagc acattgggaa gttccaagtg gaggttattt
    18541 tgtatggtta gtctttaaaa tagatataga tattaaatat ttattctacg aattgttaag
    18601 taaagaaaaa atactaatca atccgggtta catttatggc agtaaagaaa agagtataag
    18661 gctatctttt gcctttgaat caaatgaaaa tattaagcat gcgctctata aaatttatac
    18721 atatgtgaaa aaggtttaat taaaacaata attcgaatca ttatgtggca tgttaaacag
    18781 ctaaatataa gctatgcaca attaacaagc ggatactcct gacgcaatta tagtatcatt
    18841 acatattgtt taatcgtttg gggtaatgta attaaaaggt aaaataggca gagtgttata
    18901 cataaaatgt aaagaaagag gcgatagaat gtctaaaatc aggtctttta caatattaag
    18961 tctacttatt tacttagcta tgatgtgcta tacagtagtg acctattcaa aattaccaac
    19021 caaagtacct attcactata atttagcagg ggatgctgat aactttgctg ataaatgggt
    19081 gctgcttttg attaatagcg catttatagt gatttggctt atatttttca ttgcaggtag
    19141 atactatgaa cgatttgcca aatggtcaca ttataatcat acaccacgtg aaattcgagc
    19201 gattaaatta tttttaagta cgttaaattt agagattatg agctatatgt ctatcttcac
    19261 agtattagaa atttggcaaa tacaacacca tcatcaattc aatttactat ggtttaatat
    19321 gatatttatc attatcattg gtttgacgct tgtcatattt tgtttacttc ctacaattca
    19381 taaaatgaga gattctcaat aaaaatataa actgtcatga tgcagttttg aag
//
LOCUS       DALMNS010000053        19272 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.053, whole genome shotgun sequence.
ACCESSION   DALMNS010000053 DALMNS010000000
VERSION     DALMNS010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19272)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19272)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19272
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.053"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            229..603
                     /locus_tag="O6Y56_001525"
     CDS             229..603
                     /locus_tag="O6Y56_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4467 domain-containing protein"
                     /protein_id="HDB5574779.1"
                     /translation="MKRILVVFLMLAIVLAGCSNKGEKYQKDIDKVYKEQNQMNKIAS
                     KVQNTIKTDIKQEDSNTHVYKDGKVIVIGIQLYKDREKMYYFAYEIKDGKAEINREID
                     PIKYMKDHKADYEDENVEVEKD"
     gene            753..1151
                     /locus_tag="O6Y56_001526"
     CDS             753..1151
                     /locus_tag="O6Y56_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HDB5574780.1"
                     /translation="MEKSIKIMTIIGIVVQGLATVFSLLLMVLAASGVMTTDVSTTVN
                     GEVDPVDAETAAAIFTVLFLFLFIFGIISIILGAIGMFKASKNKKMSGILLIIGAVIS
                     GNIITFALWLVSGIKLLTNNKPKDQISDLS"
     gene            complement(1401..2225)
                     /locus_tag="O6Y56_001527"
     CDS             complement(1401..2225)
                     /locus_tag="O6Y56_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HDB5574781.1"
                     /translation="MKEKHIKWDKIFYGDDWVNNVVETIRTKDILQSVYLKRYLLRAM
                     MAGFIIGIITVFVLSVKATHEPDLPPGIVNMASAITFSFALVLILFTNSELLTSNFMY
                     FTVGLYYKVIKPTRVLKIFLLCFAGNILGAAILFSFMRFSNVMTPDMLNQLSAVIEHK
                     TLSTGFVSILMKAIFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYN
                     SCLFMGGLIYQVDTLHFIPAISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKNN"
     gene            complement(2460..3770)
                     /gene="brnQ"
                     /locus_tag="O6Y56_001528"
     CDS             complement(2460..3770)
                     /gene="brnQ"
                     /locus_tag="O6Y56_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000745093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HDB5574782.1"
                     /translation="MKKQVIISGLMLFSLFFGAGNLIFPPMLGHTAGQNMWIGMFGFA
                     LTGILLPFITVIVVAFYDEGVESVGNRIHPWFGFIFAVVIYMSIGAFYGIPRAANVAY
                     EIGTRHILPVHNQWTLIIFAAIFFAIVYWISLNPSKIVDNLGKLLTPLLLLMVALLSI
                     AVIFNPESALSAPKDKYITHPFISGSLEGYFTMDLVAALAFSVVIVNGYKFKGLTDRM
                     KILKYVCFSGLIAAILLGMIYFALAYVGASTAPGNFKDGTDILTYNSLRVFGSFGNLV
                     FGMTVILACLTTCIGLVNACATFTKKHVPKFSYKIFALVFSIIGFLFTTLGLEMILKI
                     AVPLLTLIYPVSIALVLISFANMFSTFRFSWAYRLATVITLIISILQILNSFDLLHGV
                     ILKWFMMLPLADIDLAWLVPFILLAIIGFIIDVVIRRPKQATTK"
     gene            4354..5244
                     /locus_tag="O6Y56_001529"
     CDS             4354..5244
                     /locus_tag="O6Y56_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase, lipoprotein e(P4) family"
                     /protein_id="HDB5574783.1"
                     /translation="MNKISKYIAIASLSVAVTVSAPQTTNSTAIAKSSAEVQQTQQAS
                     IPASQKVNLGNQNIMAVAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIAL
                     DLDETVLDNSPYQGYASIHNKPFPEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYY
                     ISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESRRQIVQKDHKLVMLFG
                     DNLLDFTDPKEATAESREALIEKHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKA
                     KDKLRKNAIKQFDPKTGEIK"
     gene            5493..6542
                     /locus_tag="O6Y56_001530"
     CDS             5493..6542
                     /locus_tag="O6Y56_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDB5574784.1"
                     /translation="MFLAWNEIRRNKLKFGLIIGVLTMISYLLFLLSGLANGLINMNK
                     EGIDKWQADAIVLNKDANQTVQQSVFNKKDIENKYNKQATLKQTGEIVSNGHQKDNVL
                     VFGVEKSSFLVPSLIEGHKATKDNEVLADETLKNKGFKIGDTLSLSQSDEKLHIVGFT
                     ESAKYNASPVIFTNDATIAKINPRLTGDKINAVVVRDTNWKDKKLNQELEAVSINDFI
                     ENLPGYKPQNLTLNFMISFLFVISATVIGIFLYVMTLQKTSLFGILKAQGFTNGYLAN
                     VVISQTLILALFGTAFGLLLTGVTGAFLPDAVPVKFDVLTLLVFAIVLMIVSVLGSLF
                     SILTIRKIDPLKAIG"
     gene            6555..7232
                     /locus_tag="O6Y56_001531"
     CDS             6555..7232
                     /locus_tag="O6Y56_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574785.1"
                     /translation="MLKFENVTKSFKDGNRNIEAVKDTNFEINKGDIIALVGPSGSGK
                     STFLTMAGALQTPTSGHILINNQDITTMKQKALAKVRMSEIGFILQATNLVPFLTVKQ
                     QFTLLKKKNKNVMSNEDYQQLMSQLGLTSLLNKLPSEISGGQKQRVAIAKALYTNPSI
                     ILADEPTAALDTENAIEVIKILRDQAKQRKKACIIVTHDKRLKAYCDRSYHMKDGVLN
                     LENETVE"
     gene            7440..8471
                     /locus_tag="O6Y56_001532"
     CDS             7440..8471
                     /locus_tag="O6Y56_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000364852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDB5574786.1"
                     /translation="MDLLIGTLFLFLVLVIFTLFTYKAPNGMRAMGALANAAIATFLV
                     EAFNKYVGGEVFGIKFLEELGDAAGGLGGVAAAGLTALAIGVSPVYALVIAAACGGMD
                     LLPGFFAGYMIGYVMKYTEKYVPDGVDLIGSIVILAPLARLIAVLLTPVVNSTLIRIG
                     DIIQSSTNTNPIIMGIILGGIITVVGTAPLSSMALTALLGLTGVPMAIGAMAAFSSAF
                     MNGTLFHRLKLGDRKSTIAVSIEPLSQADIVSANPIPIYITNFFGGAIAGLIIAMSGL
                     INDATGTATPIAGFLVMFGFNHPTTIVIYGVVMAIVGALVGYLGSIVFKKYPIVTKQD
                     MINRGAVDA"
     gene            8814..9932
                     /locus_tag="O6Y56_001533"
     CDS             8814..9932
                     /locus_tag="O6Y56_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDB5574787.1"
                     /translation="MSDSEKEILKRIKDNPFISQRELAEAIGLSRPSVANIISGLIQK
                     EYVMGKAYVLNEDYPIVCIGAANVDRKFYVHKDLVAETSNPVTSTRSIGGVARNIAEN
                     LGRLGETVAFLSASGQDSEWEMIKRLSTPFMNLDHVQQFENASTGSYTALISKEGDMT
                     YGLADMEVFDYITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTTKHQIKLVIT
                     TVSSPKMKNMPDSLHAIDWIITNKDETETYLNLKIESTDDLKIAAKRWNDLGVKNVIV
                     TNGVKELIYRSGEEEIIKSVMPSNSVKDVTGAGDSFCAAVVYSWLNGMSTEDILIAGM
                     VNAKKTIETKYTVRQNLDQQQLYHDMEDYKNGKFTKVY"
     gene            9907..10830
                     /locus_tag="O6Y56_001534"
     CDS             9907..10830
                     /locus_tag="O6Y56_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HDB5574788.1"
                     /translation="MANLQKYIEYSREVQQARKNNQPIVALESTIISHGMPYPQNVEM
                     ATTVEQIIRNNGAIPATIAIIDGKIKIGLESEDLEILATNKDVAKVSRRDLAEIVAMK
                     RIGATTVATTMICAAMAGIQFFVTGGIGGVHKGAEHTMDISADLEELSKTNVTVICAG
                     AKSILDLPKTMEYLETKGVPVIGYQTNELPAFFTRESGVKLTSSVETPERLADIHLTK
                     QQLNLEGGIVVANPIPYEHALSKAYIEAIINEAVVEAENQGIKGKDATPFLLGKIVEK
                     TNGKSLAANIKLVENNAALGAKIAVAVNKLM"
     gene            10841..12061
                     /locus_tag="O6Y56_001535"
     CDS             10841..12061
                     /locus_tag="O6Y56_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDB5574789.1"
                     /translation="MNILFAITGIAFALFVAFLFSFDRKNIDFKKTLIMIFIQVLIVL
                     FMMNTTIGLTILTALGSFFEGLINVSKAGINFVFGDIQNKNGFTFFLNVLLPLVFISV
                     LIGIFNYIKVLPFIIKYVGIAINKITRMGRLESYFAISTAMFGQPEVYLTIKDIIPKL
                     SRAKLYTIATSGMSAVSMAMLGSYMQMIEPKFVVTAVMLNIFSALIIASVINPYKSDD
                     TDVEIDNLTKSTETKTLNGKTGKPKKVAFFQMIGDSAMDGFKIAVVVAVMLLAFISLM
                     EAINILFGSVGLNFRQLIGYVFAPIAFLMGIPWSEAVPAGSLMATKLITNEFVAMLDF
                     KNVLGDVSARTQGIISVYLVSFANFGTVGIIVGSIKGISDKQGEKVASFAMRLLLGST
                     LASIISGSIIGLVL"
     gene            complement(12167..13699)
                     /locus_tag="O6Y56_001536"
     CDS             complement(12167..13699)
                     /locus_tag="O6Y56_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HDB5574790.1"
                     /translation="MKEVGFGTLNWVAVIIYLLAMLFIGVYFTKRASQSTNSFFTASG
                     RLPSWVVGFSIYATTLSAITFMSTPEKAFLTDWSYIAGNIAIVAIIPLLIYFYVPFFK
                     KLKVTSAYEYLEARFGPSIRVIGSLLFVVYHLGRVAIVIYLPTLAITSVSDMNPYIVA
                     SLVGLLCILYTFLGGFEGVVWSDFIQGVILLGGALVIIILGVMNIKGGFGTVFADAIE
                     HKKLISADNWKLNTAAAAIPIIFLGNIFNNLYQYTASQDVVQRYQASDSLKETNKSLW
                     TNGILALISAPLFYGMGTMLYSFYAHEAVLPKGFNTSSVVSYFILTEMPPFVAGLLIA
                     AIFAAAQSTISSSLNSISACISIDIKQRFFGKGSERHEVNFARFIIIIAGIFGFGMSL
                     YLIASNSNDLWDLFLFVTGLFGVPLAGVFAVGIFTKRTNTFGVICGLILGIIFAYVYN
                     GVGKGNSPFYVSTISFTVAFVFAYILSFIVPSKHKKDITGLTIFEKDKPSTYISKTAT
                     KK"
     gene            complement(13739..14620)
                     /locus_tag="O6Y56_001537"
     CDS             complement(13739..14620)
                     /locus_tag="O6Y56_001537"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HDB5574791.1"
                     /translation="MNKDLKGLYAALLVPFDENGQVNEQGLKQIAQNAIETEELDGLY
                     VNGSSGENFLLNTEQKKQVFKVAKEAVGDKVKLIAQVGSLDLNEAIELGKYATELGYD
                     ALSAVTPFYYPFTFEEIRDYYFDIIEATQNNMIIYAIPDLTGVNISIEQFSELFNHEK
                     IVGVKYTAPNFFLLERIRKAFPDKLILSGFDEMLVQATISGVDGAIGSTYNVNGRRAR
                     KIFDLARQGQIQEAYQLQHDSNDIIETVLSTGIYPTLKEILRHRGIDAGLPKRPFKPF
                     NEAHRQTLDQLIAKYDL"
     gene            14779..15639
                     /locus_tag="O6Y56_001538"
     CDS             14779..15639
                     /locus_tag="O6Y56_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HDB5574792.1"
                     /translation="MYYIAIDIGGTQIKSAVIDKQLNMFDYQQIPTPDNKSELITDKV
                     YEIVTGYMKQYQLIQPVIGISSAGVVDEQKGEIVYAGPTIPNYKGTNFKRLLKSLSPY
                     VKVKNDVNAALLGELKLHQYQAERIFCMTLGTGIGGAYKNNQGHIDNGELHKANEVGY
                     LLYRPTENTTFEQRAATSALKKRMIDGGFTRSTHVPVLFEAAEEGDDIAKQILNEWAE
                     DVAEGIAQIQVMYDPGLILIGGGISEQGDNLIKYIEPKVAHYLPKDYVYAPIQTTKSK
                     NDAALYGCLQ"
     gene            complement(15916..16716)
                     /locus_tag="O6Y56_001539"
     CDS             complement(15916..16716)
                     /locus_tag="O6Y56_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDB5574793.1"
                     /translation="MKFENRVQRYQHLFTKTDKRIVNYIRQNGYSDAFSTINSLAHAI
                     GTSPATMTRFSHKLDYENFQDLKFNIQQEMTETVIENSPIIQRIHKYHQQIIQQTGEF
                     IDNDIIQTFIDKLQSSRHILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISA
                     SLLSHSDMFIAMSNSGNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLTTD
                     QSRNTDHQFINTQIATLFLIDIVSYHLLENTNLSQTYQHTKSIILDNK"
     gene            16856..17524
                     /locus_tag="O6Y56_001540"
     CDS             16856..17524
                     /locus_tag="O6Y56_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HDB5574794.1"
                     /translation="MLPHGLIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRANTK
                     EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQRPK
                     ETLDELVTYIRTHAPNVEIMADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQ
                     NDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITRPKEITKRFVQ
                     VMED"
     gene            complement(17650..18963)
                     /locus_tag="O6Y56_001541"
     CDS             complement(17650..18963)
                     /locus_tag="O6Y56_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiH family protein"
                     /protein_id="HDB5574795.1"
                     /translation="MNQYHSNAQQPSAWRFFVYSLVGILCFFIPFTINGNNTIFVDHV
                     HLAIRSIIGPLMPYVALIMILIGTALPIVRRTFMTSITNLVITLFKVAGAIIGIMYVF
                     KIGPSILFKANYGPFLFEKLMMPLSILIPVGAIALSLLVGYGLLEFVGVYMEPIMRPI
                     FKTPGKSAVDAVASFVGSYSLGLLITNRVYKQGMYNKREATIIATGFSTVSATFMIIV
                     AKTLGLMPHWNLYFWITLVITFVVTAITAWLPPITNESTEYYNGQEGEQEVAIEGSRL
                     KTAYAEAMKQNALTPSLVKNVWDNLKDGLEMTVGILPSILSIGFLGLIVANYTPFIDW
                     LGYIFYPFIYIFPIADQAVLAKASAISIVEMFLPSLLVTKAAMSTKFVVGVVSVSAII
                     FFSALVPCILATEIKIPVWKLIIIWFLRVALSLLITIPVALLIFG"
BASE COUNT         6791 a         2917 c         3553 g         6011 t
ORIGIN      
        1 tttattatga tgacataatt ttcagtagat agttgtaaat taacactgaa atagatgttt
       61 atattaagaa gactttaata tcataattaa tcaaaatctt gcgtcaaaca tttaaacgaa
      121 ttttaagttt ataacaattg gttaaacatt gttcaaacat tacaatgata aagtatatta
      181 tcagtattgt agtgtgtgga aaatggcagc catctgagga gaaaaatgat gaaaagaata
      241 ttggtagtat ttttaatgtt agcaattgta ttggcaggtt gttctaataa aggtgaaaag
      301 tatcaaaaag atattgataa agtgtacaaa gaacagaatc aaatgaataa aattgcctcg
      361 aaagtacaaa acactattaa aacagacatt aaacaagaag acagtaatac acatgtttat
      421 aaagatggta aagtcattgt tattggtatt caattgtata aagatcgtga aaaaatgtat
      481 tatttcgcat atgaaataaa agatggtaag gcagaaatca atagagaaat agatccaatt
      541 aagtatatga aagaccataa agcagattat gaagatgaaa atgtagaagt ggaaaaagat
      601 taacgtatgc tttctttaaa acttttaacc agtttcaaaa agtaaatgag ctttagcgac
      661 aataattttt aaaataaaca cgatataaat ttaaacattt atatataaga acacaaacgt
      721 aagtttgtaa ataataataa aggagtaagt caatggaaaa atcgatcaaa ataatgacaa
      781 taataggaat tgttgttcaa ggtttagcaa cggtatttag tttactattg atggttttag
      841 cagcatcagg tgtaatgact acagatgtgt caacaacagt taatggtgag gttgacccag
      901 ttgatgcaga aacagcagca gcaattttca ctgtattatt cttattccta tttatatttg
      961 gaatcatttc aattatttta ggtgcaatcg gtatgtttaa agcatctaaa aacaaaaaaa
     1021 tgagtggtat attgttgatt attggagctg taataagtgg taacataatt acatttgctt
     1081 tatggttagt cagtggtatt aaactactta ctaataacaa gcctaaagat caaataagcg
     1141 acttatcata aacatcgtat attgaaattt caagatttct taagtaatta tatttctgtt
     1201 aggttttaac aaattaaccg attaaataaa gtgctctctt agaagtagat tttcagtcaa
     1261 taactgcttt taagagagta ttttgtattt gataataagc atgccatcgg acaaaaagca
     1321 ttgacgaact ttaaaaaaat acgttagaca atgcacttct aaatattaaa ggcatcgact
     1381 aacgcattgt ttaaatagag ttaattattt ttataaaatt gatgatgatc attcaagtaa
     1441 gcatagaata aacctataat gagaccgcct ccgatatagt taccgataaa agcggcagca
     1501 atatttgaaa tagcaggaat gaagtgcaat gtatcaactt gataaattaa gccgcccata
     1561 aacaagcaac tgttgtaaac gacatgttca taacccataa aggcgaatat ggtaacaccg
     1621 aacatcatga caaacatttt tgcaagtaca tcgtcaattt gcatggcgat aactaatgaa
     1681 atattaataa aaaagttggc gaatatcgct ttcattaata tacttacaaa cccagtagac
     1741 aacgttttat gttctataac tgctgataat tgatttaaca tatctggcgt cattacattt
     1801 gaaaaacgca tgaaactaaa taaaatagca gcacctaaaa tatttcctgc aaagcataat
     1861 aaaaatattt tcaatactct agttggttta attactttat aatacaggcc tacagtaaag
     1921 tacatgaagt tactagttag tagttcggag tttgtaaata aaatgagtac taacgcaaaa
     1981 ctgaatgtaa tggcgctggc catattcaca atgcctggcg gtaaatctgg ttcgtgtgtt
     2041 gctttaactg ataatacgaa gaccgtaata atcccgataa taaatcctgc catcatagcg
     2101 cgtaatagat aacgttttaa ataaacgctt tgtaatatat ctttcgttct tatcgtttcg
     2161 actacgttat ttacccagtc gtccccataa aatattttat cccatttaat atgtttctcc
     2221 ttcacaatga catcctcact tttcatttgt taatcagagt atactatgaa tcgccttatt
     2281 tgtgaataat ttcacaaaat taattttaaa aactaatatt tttgaataac agctaggatt
     2341 ttttaacaaa tcatttattt taaaataatt aatcgccagt tagtatcaat gaataaatac
     2401 agattttcat acaaaaaacc tagtaatgat gcgacgatca ttactaggag attatgcttc
     2461 tatttagttg tcgcttgttt cggacggcgt ataactacat cgatgatgaa acctatgatt
     2521 gccaaaagaa tgaatggtac aagccaagct aaatcgatat ctgctaaagg taacatcata
     2581 aaccatttca aaataacacc gtgtaataag tcgaaactgt ttagtatttg taaaattgaa
     2641 ataatcaatg taataacagt tgcgagtcga taggcccaac tgaatctgaa tgtgctaaac
     2701 atgttagcaa atgatatcag tacaagtgca atagacacgg gatatattaa tgtcaacaat
     2761 ggtacagcaa tttttaaaat catttctaaa ccaagtgttg taaataaaaa tcctatgata
     2821 gagaaaacaa gtgcgaatat tttataagaa aacttaggca cgtgtttctt agtaaatgtt
     2881 gcacaagcgt tgacgagtcc tatacatgtt gttaggcatg caagaataac cgtcattcca
     2941 aatacgaggt taccgaacga accaaatacg cgtaatgagt tgtacgtcaa tatatctgta
     3001 ccatctttaa agtttcctgg agccgttgat gccccaacgt atgcaagtgc aaagtaaatc
     3061 attccaagta atatggctgc aataagacct gaaaagcaga catattttaa aattttcatg
     3121 cgatctgtga gccctttaaa cttatagcca ttgacaatga ctaccgaaaa agctaacgca
     3181 gcaacaagat ccattgtaaa atagccttcc aaacttcctg aaatgaaagg atgtgttata
     3241 tatttatcct taggtgcact tagtgcagat tcagggttga aaatgacagc aatacttaat
     3301 agagcgacca tcaatagtaa taatggtgtt aataatttac ctaaattatc aacgattttc
     3361 gatggattta aactaatcca gtaaacgatg gcaaaaaaga ttgctgcgaa tataattaaa
     3421 gtccattggt tgtgcacagg taaaatgtgt cttgtaccaa tttcgtacgc gacatttgca
     3481 gcacgtggaa taccgtaaaa tgctccgata gacatgtaaa tgacgacagc gaaaataaac
     3541 ccgaaccatg gatgtatacg attgcctaca ctttcaacac cttcatcata aaatgcgaca
     3601 acgataacag taataaaggg tagtaaaatg ccagtaaggg caaagccaaa catgccaatc
     3661 cacatatttt gacccgctgt atggccgagc atgggcggga atattaaatt tccggctcca
     3721 aaaaatagtg aaaataacat gaggcccgaa ataataactt gttttttcaa tgtaatttcc
     3781 ttcctaaaac tagatattca taataattta aaaaatctga aaaataaaaa cgtacttact
     3841 ttatctttaa atgacaatac tatgattcta ttattttata aaaaagattg caataataac
     3901 gtcttgctat tattggataa tgacaattaa agtgtcgttt ttatgaatta aaataggtga
     3961 aagtaagttg gaaatacgtt ggagcgttgt gatttttatg agaaattgtg tgagtgagga
     4021 ctgctattta taaaaggtaa actatggatg agtttatggt tgttccaata ggtaaataag
     4081 agatagcaca ctgtacacat aatgatacat ggatgagtga atatgtctga tagaaaggcc
     4141 tagtcactca aatgaattta agtttattac gtgataaatc acaaatctct ctcatgtgat
     4201 aggtctccca ttaaatcatg cttatatgaa atgttcacat atttgttagc ttttcaagaa
     4261 ataatattaa atatcttttc atagtatagc aatattaaat aaatgcattt ataattttaa
     4321 ctgtatttta aatattaatc atgaggtgat aagatgaata aaatttcaaa gtatattgca
     4381 atagcatcat tatcggtagc ggttacagtt tctgcaccac aaacgacaaa ttctacagcg
     4441 attgccaaaa gttctgctga agttcaacaa acgcaacaag cttctatacc agcatcacaa
     4501 aaggtgaatc ttggtaatca aaatattatg gcagtggctt ggtatcaaaa ttcagctgaa
     4561 gcaaaagcat tatatttaca aggttataac agtgcaaaga ctcagttaga taaagagatt
     4621 aaaaagaata aaggtaaaca taagttagct attgctttgg atttagatga aacagtttta
     4681 gataattctc catatcaagg ctatgcatca atacataata aacctttccc ggaaggttgg
     4741 catgaatggg tacaagctgc taaagctaaa cctgtctatg gcgcaaaaga attcttgaaa
     4801 tatgctgaca aaaaaggcgt cgatatctac tatatttctg atagagataa agaaaaagat
     4861 ttaaaggcaa cacaaaagaa cttaaaacaa caaggtatcc ctcaagctaa gaagagtcat
     4921 attttactaa aaggtaaaga tgataagagt aaagaatcac gtagacaaat agttcaaaag
     4981 gatcataaac ttgtcatgct atttggagat aatttattag actttacaga tccaaaagaa
     5041 gctacagctg aatctcgtga agcattaatt gaaaaacata aagacgattt cggtaagaaa
     5101 tatatcattt tccctaaccc aatgtatggt agttgggaag ctacaattta caacaataac
     5161 tataaagcaa gtgacaaagc aaaagataaa ttacgtaaaa atgctattaa gcaattcgat
     5221 cctaaaacag gcgaaattaa ataatatatg aattggacgt ctacatgtac ttaaaggtat
     5281 atgtaggcgt ttttaaattg atccgtaatt ttaaatgtac cgtacaaaaa taataggcaa
     5341 ttaattgcat tttctataaa tttgctttta atataaaaag ttcgggtata atgaaggata
     5401 agtgtatgta tagcattaca gagcgcaaca cgacgtacgt gcatctaaga atataaacaa
     5461 tgtttaaatc atagtagtag ggagagaaat gcatgttttt agcttggaat gaaatacggc
     5521 gcaacaaatt gaagtttgga ctaattattg gtgtgttaac gatgattagt tacttgctat
     5581 ttttattatc tggattggcg aatggtctta tcaatatgaa taaagaaggt attgataagt
     5641 ggcaagcaga tgccattgtt ctaaataaag atgccaatca aactgtgcaa caatctgttt
     5701 ttaacaagaa agatattgaa aataaataca ataagcaagc tactttgaag caaacagggg
     5761 aaattgtgtc taatggccat caaaaagaca atgttttagt gttcggtgtt gaaaagtcat
     5821 catttttagt tccgagttta atagaagggc ataaagcgac taaagataat gaagtgttag
     5881 ctgatgaaac gcttaaaaat aaaggattta aaattggcga cacattatca ctatctcaat
     5941 cagatgaaaa attgcatatc gtaggtttta cagaaagtgc aaaatataat gcgtcaccag
     6001 tcattttcac gaatgacgct accattgcca agatcaatcc tagattgact ggagataaaa
     6061 ttaatgcagt tgttgtacgt gatacaaatt ggaaagacaa aaaattaaac caagagcttg
     6121 aagcggtaag tattaatgac tttattgaaa atttaccagg ttataaacca cagaacttaa
     6181 cattaaactt tatgatttca ttcttatttg tcatttcagc tacagttata ggcattttct
     6241 tatatgtcat gacattacaa aaaacaagtt tatttggcat attaaaggct caaggattta
     6301 cgaatggcta tttagcgaac gtagttattt cgcagacgct catattagca ttattcggta
     6361 cggcatttgg cttactgtta acaggcgtta caggtgcatt tttacctgat gcagtacctg
     6421 tcaaattcga tgtactaaca ttactcgtat ttgcaattgt gttaatgatt gtctctgtat
     6481 taggaagttt attctccatt ttaacaatta gaaaaataga tccgttaaag gcgattgggt
     6541 aggaggtgta gcaaatgttg aaatttgaaa atgtaacaaa gtcatttaaa gatgggaatc
     6601 gtaacattga agcggttaaa gatacgaatt ttgagataaa taaaggtgat attatagcat
     6661 tggttggacc ttctggctct ggtaaaagta catttctaac tatggcaggt gctttacaaa
     6721 cgccgacatc tgggcacatt ttaatcaata accaagatat tacgacaatg aagcaaaaag
     6781 cattggcaaa agttagaatg tctgagatag gttttatttt acaagctaca aatcttgtgc
     6841 catttttaac ggtaaagcaa caatttacat tactgaaaaa gaaaaataag aatgttatgt
     6901 ctaatgaaga ctatcagcaa cttatgtcac aattagggct aacatcattg cttaataagt
     6961 taccttcaga aatttcaggt ggtcagaaac aacgtgtggc gatagccaaa gcgttatata
     7021 cgaatccgtc gattatttta gcggatgaac ctaccgcggc tttagatact gaaaatgcga
     7081 ttgaagtcat taaaattcta cgtgatcaag ccaaacaaag aaagaaagca tgtattattg
     7141 ttacacatga taaacgactt aaagcatatt gtgatcgttc atatcatatg aaagatggcg
     7201 tccttaatct tgaaaatgaa acagtagaat agttttatta agccggtaca tcatgtgccg
     7261 gtatttttat gtttatgtat tatttgaata aactttcaca ttcaattaat aataattatt
     7321 atcgaaaatt agaaatattc cgtgaaatat aatatttttt gtagtaaaat ggcctctaag
     7381 tattcaatat ttaaatatgg ggattgaata taaatttatc gtaatggggg tcaatggtta
     7441 tggatttatt gataggtact ttatttttat ttttggtctt agtgattttt acattattta
     7501 catataaagc acctaatggt atgcgcgcca tgggagcatt agcaaatgca gcaatcgcaa
     7561 catttttagt agaagcattt aataaatatg ttggtggcga agtattcggt attaaatttt
     7621 tagaagagct aggagacgct gcgggaggtc taggtggtgt cgctgccgct ggattaacag
     7681 cattagctat cggggtgtca ccagtatatg cattagttat agcagccgcg tgcggtggta
     7741 tggatttatt accaggtttc tttgcgggtt atatgattgg atatgtgatg aaatatacag
     7801 agaaatatgt gccggatggt gtcgacttaa ttggatcgat tgtcatctta gcgccattag
     7861 ctcgtcttat tgcagtatta ttaacgccag tagtgaatag tacattgatt agaattggtg
     7921 atattatcca aagtagtacg aatacgaatc caattatcat gggtatcatt ttaggtggta
     7981 ttatcacggt tgtcggcaca gcgccattga gttcaatggc attgacagca ttattaggtt
     8041 taacgggtgt acctatggct attggtgcca tggcagcatt tagttcggca tttatgaatg
     8101 ggacgctatt ccatcgctta aaattaggtg atcgtaagtc tacgattgca gtaagtattg
     8161 aacctttatc acaagcagat attgtatcag ccaatccaat tccaatctat attacaaatt
     8221 tctttggtgg tgcgattgct ggtttaatta ttgctatgtc aggtttaatt aacgatgcga
     8281 caggtacagc tacaccgatt gcaggatttt tagttatgtt tggatttaat catccgacga
     8341 caattgtgat ttatggtgta gtaatggcga ttgtaggtgc gcttgtaggt tatcttggtt
     8401 caatcgtatt taaaaaatac ccaattgtta ctaagcaaga catgattaat cgaggtgcag
     8461 tagacgcata gcatcatcat attgaatagt aaaaacaaat aaaacatagt aacgtgattc
     8521 agtcgatgta acagtcgata atgagtcacg tttttttata gaaaaatata agacataaaa
     8581 atgtcataat ttatagtcga caaatatcat actgtataaa catttatcat tttctcaggt
     8641 gccttttacg cgatggaatg aacttacttt ttacgaaatt atgcgtattt tataaacaaa
     8701 tatcattgat ataacggtaa atgtaagcgt ttacaacaga aataactgca tgctacgata
     8761 tttttgtaaa ttcactgatt caagtatttt aagtcaatat gaggagggat gttatgagcg
     8821 attctgagaa agaaatttta aaaagaatta aagataatcc gtttatttca caacgtgaac
     8881 ttgctgaggc aattggatta tctagaccca gcgtagcaaa cattatttca ggattaatac
     8941 aaaaggaata tgttatggga aaggcatatg ttttaaatga agattatcct attgtttgta
     9001 ttggcgcagc gaatgtagat cgtaagtttt atgtgcataa agatttagtt gcagaaacat
     9061 caaatcctgt aacgtcaaca cgctctattg gtggcgtagc aagaaatatt gctgagaact
     9121 taggtaggct tggcgaaacg gtcgcttttt tatctgctag tggacaagat agtgaatggg
     9181 aaatgattaa acgattgtcc acaccattta tgaatttgga tcatgttcaa caatttgaaa
     9241 atgcgagtac aggttcatat acagctttaa ttagtaaaga aggcgacatg acatatggct
     9301 tagcagatat ggaagtgttt gactacatta cgcctgaatt tttaattaag cgttcacact
     9361 tattgaaaaa ggctaagtgc attattgtcg atttgaattt aggcaaagag gcattaaact
     9421 tcttatgtgc ctataccacg aaacatcaaa tcaaattagt tatcaccacg gtttcttccc
     9481 caaaaatgaa aaatatgcct gattcattac atgctattga ttggattatc acgaataaag
     9541 atgaaacaga aacatactta aatttaaaaa tagaatctac tgatgattta aaaatagctg
     9601 ctaaacgctg gaatgattta ggtgttaaaa atgttattgt gacaaatggc gtgaaagaac
     9661 tcatttatcg aagtggtgag gaagaaatca tcaagtcagt tatgccatca aatagtgtga
     9721 aagatgttac aggtgcaggt gattcattct gtgctgcagt agtgtatagc tggttaaatg
     9781 ggatgtctac tgaagatata ttaattgctg gtatggttaa cgcaaagaaa acgatagaaa
     9841 cgaaatatac agttaggcaa aacctagatc aacagcaact ttatcacgat atggaggatt
     9901 ataaaaatgg caaatttaca aaagtatatt gagtattctc gagaagttca gcaagcacgg
     9961 aagaacaatc aacctattgt agcattagaa tcaacaatta tttcacatgg tatgccgtac
    10021 ccgcaaaatg ttgaaatggc aacaacagta gagcaaatta tcaggaataa tggtgccatt
    10081 ccagcaacca tagccattat agatggcaaa attaaaattg gtttagaaag tgaagattta
    10141 gaaatacttg caactaataa agatgttgct aaagtgtcta gaagggattt agcagaaatt
    10201 gttgcgatga agcgtattgg tgctactact gtagcgacga cgatgatatg tgctgcaatg
    10261 gctggtattc aattttttgt tactggaggt attgggggtg tccataaagg tgcagaacat
    10321 acgatggaca tttcagcaga cttagaagaa ctgtctaaaa caaatgtcac tgttatctgt
    10381 gcaggtgcca aatcaatttt agacttacct aagacaatgg agtatttaga aacaaaaggc
    10441 gttccagtta ttggatatca aacgaatgaa ttgccagcat tcttcactcg cgaaagcggt
    10501 gttaagttaa caagttcggt tgaaacgcca gaacgacttg ctgacattca tttaacaaaa
    10561 cagcagttaa atcttgaagg tggcattgtt gttgctaatc ccattccata tgagcatgcc
    10621 ttatcaaaag catatattga ggcaatcata aatgaagctg ttgttgaagc cgaaaatcaa
    10681 ggtattaaag gtaaggacgc cacaccgttc ttgttaggga aaattgtaga aaaaacgaat
    10741 ggtaaaagtt tagcagcaaa tataaaactt gttgaaaaca atgcggcgtt gggtgctaaa
    10801 attgctgtcg ctgttaataa attaatgtag gtgatgatac atgaatattt tattcgctat
    10861 cacagggata gcatttgcac tatttgttgc gtttttattc agttttgatc gtaaaaacat
    10921 agacttcaaa aagacgttaa taatgatatt tattcaagtg ttgattgtgt tatttatgat
    10981 gaacacaacg attggtttaa caatcttaac tgcattaggt tcattttttg aagggttaat
    11041 aaatgttagt aaagcaggta taaactttgt ttttggagat atacaaaata aaaatggctt
    11101 tacattcttt ttaaatgtgt tgctgccatt agtattcatt tctgtattaa taggcatttt
    11161 taattatatt aaggtattac catttattat caaatatgta ggtattgcta ttaataaaat
    11221 aacgagaatg gggcgtttag aaagttactt tgctatttcg acagcgatgt ttggacagcc
    11281 agaagtgtat ttaactataa aagatattat accaaagttg tctagagcaa aattatatac
    11341 aattgcgaca tctggtatga gtgctgttag tatggcaatg ttgggttcat atatgcaaat
    11401 gattgaacct aagttcgtag ttacagcagt aatgttaaat atttttagtg cgcttatcat
    11461 cgccagtgta atcaatccct ataaatctga tgatactgat gttgaaattg ataacttaac
    11521 gaaatccaca gaaactaaaa cattgaatgg aaaaacagga aaacctaaga aagttgcctt
    11581 tttccaaatg attggtgata gtgcaatgga tgggtttaaa atcgctgttg tagtagccgt
    11641 aatgttgtta gcatttattt cattaatgga agcaattaat atcttgtttg gtagtgttgg
    11701 tttgaacttt agacagctta ttggctatgt gtttgcacca atcgcatttt taatgggtat
    11761 tccatggagt gaagcagttc cagctggctc tttaatggcg accaaattaa ttacaaatga
    11821 gtttgtagca atgcttgatt ttaaaaatgt cctgggtgat gtatctgctc gaacacaagg
    11881 tatcatttca gtttacttag taagcttcgc taattttggt acggttggta tcatcgttgg
    11941 ttcaattaaa ggcattagtg ataaacaagg agaaaaagtt gcatcctttg caatgaggtt
    12001 gctacttggt tcaactctag cttcaatcat ttcaggatca attattggct tagtattgta
    12061 aattaatcga agtatctaaa ttaaattcat ggcaacatca aaaccccatc accaagttgg
    12121 cgcaacagcg catcataact tggtgatggg gttttatcat aacagtctac tttttcgtag
    12181 ccgtttttga aatgtatgtt gatggtttat ctttttcaaa aattgttaat cccgttatat
    12241 cttttttatg ttttgaaggg acaatgaagc taagtatata agcaaagaca aaagcaactg
    12301 taaatgaaat ggtagataca tagaaaggtg agttaccttt gccaacacca ttatagacgt
    12361 aagcaaagat gatacccaat attaatccac aaataacacc gaatgtattc gtacgtttag
    12421 tgaaaatacc aactgcaaat acaccagcca atggaacgcc gaataatcca gttacaaaca
    12481 agaataaatc ccataggtca tttgaattag aagcaattaa gtatagtgac attccaaaac
    12541 cgaaaatacc tgcaatgatg ataatgaaac gtgcaaagtt aacttcgtgt cgctcgctac
    12601 cttttccgaa gaagcgttgc ttaatgtcga ttgaaataca agcagatata gaatttaaac
    12661 tagatgaaat ggtagactgt gcagcggcga aaatggctgc aataagtaat cctgctacaa
    12721 atggtggcat ctcagtcaaa atgaaatatg acactacaga tgatgtattg aagccttttg
    12781 gtaaaacagc ttcatgtgca taaaatgaat acagcattgt acccatacca taaaataagg
    12841 gtgctgaaat taaagctagg ataccatttg tccataacga tttatttgtt tcttttaaac
    12901 tatcagaagc ttgataacgc tgcacgacgt cttgactcgc tgtgtattga tacaaattgt
    12961 tgaaaatatt tcctaggaaa ataattggaa tggcagctgc tgcagtattt agtttccaat
    13021 tgtctgcact aattaatttt ttgtgctcaa tcgcatctgc aaagacagtg ccaaaaccgc
    13081 ctttgatatt cataacacca agaatgatga taactaaagc gccgcctaat aaaatgacgc
    13141 cttgaatgaa atcactccaa accacacctt cgaatccacc taaaaatgta tataaaatac
    13201 atagtaaacc aacgagtgat gcaacgatat aaggattcat gtctgataca gatgtaatcg
    13261 ctaatgttgg taagtagata acgattgcta cacgccctag atgataaact acaaatagta
    13321 aagagccaat gacacgaatg ctaggtccga aacgtgcttc tagatattca tatgcagatg
    13381 ttacctttaa ctttttaaag aatggaacat agaaataaat gagtaatgga ataattgcta
    13441 cgatagcgat gttacctgca atatatgacc aatctgttaa aaatgctttc tctggtgtag
    13501 acataaacgt aattgcactt aatgtagtgg cataaattga aaacccaact acccaagatg
    13561 gcaagcgacc acttgcggta aagaaactat tcgtactttg gctcgcgcgc ttggtaaaat
    13621 aaacgccaat gaacaacata gctagtagat aaatgataac ggcaacccag ttcagtgtgc
    13681 caaatccaac ttctttcatg gacaacatcc cctttacaat gtattgattc tttgatgtct
    13741 ataaatcgta ttttgcaatg agttgatcta atgtttgtcg atgtgcttcg ttaaaaggtt
    13801 tgaatggacg tttcggtaat cctgcatcaa tgccacggtg acgtagtatt tctttcaatg
    13861 ttggataaat acccgttgat aacactgttt cgatgatgtc gtttgaatca tgttgtagtt
    13921 ggtaagcttc ttgaatttga ccttgtcttg ctaagtcgaa gatttttcta gcgcggcgac
    13981 cattaacgtt atatgtagaa ccaattgcac catctacgcc agaaatcgta gcttgaacta
    14041 acatttcatc aaagccagat aagattaatt tgtctgggaa tgcttttcta atacgttcga
    14101 gtaggaagaa gttcggcgct gtatatttaa caccaacaat tttttcgtga ttaaaaagct
    14161 cgctgaattg ttcaatagaa atattcacac ctgttaaatc tggtattgca taaataatca
    14221 tattgttctg tgttgcttcg ataatatcga aatagtaatc tctaatttct tcaaaagtaa
    14281 atggatagta gaatggtgtt acggcagaaa gtgcatcata accgagttct gtggcatatt
    14341 ttccgagttc aatggcttca tttaaatcta acgaacctac ttgagcaatc aattttacct
    14401 tatccccaac tgcctctttg gcaaccttga aaacttgctt cttctgttct gtatttaata
    14461 aaaagttttc gcctgagcta ccatttacat aaagaccgtc taattcttca gtttcaatgg
    14521 cattttgagc aatttgttta agtccttgtt catttacttg accattttca tcaaaaggaa
    14581 cgagtaacgc tgcatataaa ccttttaaat ctttgttcat tatgaagtcc ctccaaaaaa
    14641 tcatttgata atatagttta cagctataat tgtaaacgct atcataaaat gtaacaatat
    14701 ctttttgaaa attgtagtca tatttatgta taattaatga aaatattttt caaaatcaat
    14761 agaaatggag tgagtaaggt gtattacatc gcaatcgata ttggaggcac tcaaattaaa
    14821 tcggcagtta ttgataagca attgaatatg tttgactatc aacaaatacc aacgccggac
    14881 aataaaagtg agcttattac tgacaaagta tatgagattg taacaggata tatgaagcaa
    14941 tatcagttaa tccaacctgt cataggtatt tcatcagcag gcgttgttga tgaacaaaaa
    15001 ggcgaaattg tatacgcagg gccaaccatt ccgaattata aaggtactaa ttttaagcga
    15061 ttattaaaat ccctgtctcc ttatgtcaaa gtaaaaaatg atgtgaacgc tgcattacta
    15121 ggcgaattga aattacatca atatcaagca gaacggatct tttgtatgac gcttggtaca
    15181 ggcattgggg gtgcgtacaa aaataatcaa ggacatattg ataatggtga acttcataag
    15241 gcaaatgaag ttgggtattt attgtatcgt ccaactgaaa atacaacgtt tgagcaacgt
    15301 gctgcaacga gtgcattgaa aaagcgcatg attgacggag gatttacgag aagcacacat
    15361 gtgccagtat tgtttgaagc agctgaagaa ggtgatgata ttgcaaaaca aatattgaat
    15421 gagtgggcag aagatgtagc agaagggatt gcccaaatac aagtcatgta tgatccaggg
    15481 cttatattaa ttggtggcgg tatatctgaa caaggagaca atctcattaa atatatcgag
    15541 ccgaaagttg cacactattt accaaaagac tatgtttatg caccgataca aacgactaag
    15601 agtaaaaatg atgcagcatt atatggctgt ttgcaatgat ggttgaaaga aggagtcatt
    15661 ctaaaataga atttgaaacc gatacgagag atgagagcag ttgttagttc cacacatcac
    15721 actctatcta ggaccaatct aaactatatc aaccaacagt gtgccacggg catattaaat
    15781 tgaagacgct tgaacgtata gatttcaaaa atgtaaaaaa gtatttggta ttgaaattaa
    15841 aaaagcacct agcaacttgt tgggacaatc acgatgattg tttacagttg caggtggatt
    15901 tgaatatact actagttatt tgttgtctag gataatagat ttagtatgtt gataagtttg
    15961 actcagattt gtattttcta ataaatgata actcacgata tcgattaaaa agagtgtcgc
    16021 aatttgtgtg ttgataaatt gatggtcggt attacgcgat tgatccgttg ttaaaagtac
    16081 taaatctgca caatctgtaa gtttactacc ttcgaaattt gtgatggcaa cgacatatgc
    16141 accatgagat ttggcgactt ccgctgctga aattaattcc gaagtattac cactatttga
    16201 catagcaata aacatgtccg aatgagatag tagagatgcc gatattttca ttaaatgtga
    16261 atcggtagta acattacctt ttagccccat acgaatcata cgataataaa attcagtcgc
    16321 tgataaacca gagctaccta gtccagcaaa gagtatatgt cgacttgatt gaagtttgtc
    16381 gataaaggtt tggataatgt cgttatcaat aaattcacca gtttgttgaa tgatttgttg
    16441 atgatattta tgaattcttt gaatgattgg gctattttca ataactgtct ctgtcatttc
    16501 ttgttgaata ttaaatttta aatcttggaa attctcataa tccagcttat gactaaagcg
    16561 tgtcatcgtt gctggtgatg taccaatcgc atgggctaag gagttaatcg ttgaaaaggc
    16621 atcgctataa ccattttgtc ttatataatt gacgatgcgt ttatcagttt ttgtaaataa
    16681 atgttgataa cgttgaacac gattctcaaa tttcattgtg tcaccccttc atcttaatga
    16741 ttactattat atatgaaaaa tattttcaag atagtaaaaa gcattgataa aaattatctt
    16801 aatgatatat tgtaaatgac tttacgtgaa aaaacgactt atggagtgag gaataatgtt
    16861 accacatgga ttaatagtat cttgtcaggc actaccagat gaaccattac attcatcttt
    16921 tattatgtcg aaaatggcat tagctgcgta tgaaggtggt gctgttggta ttcgcgcaaa
    16981 tactaaggaa gacattttag caattaaaga aacggtagat ttaccagtta ttggcattgt
    17041 gaaacgtgac tatgatcact cagatgtttt cattactgca acgtcaaaag aagttgatga
    17101 actgatagaa agccaatgtg aagtcattgc attggatgca acgttacagc aacgtccgaa
    17161 agaaacgtta gacgaattag tgacatatat tagaacacat gcacctaacg ttgaaatcat
    17221 ggctgatatc gcgaccgttg aagaagctaa aaatgcggca cgacttggct ttgattatat
    17281 tggcacgacg ttacatggtt atactagtta tacgcaagga caattacttt atcaaaatga
    17341 cttccaattt ctaaaagatg tactacaaag tgttgatgca aaagttattg cggaaggtaa
    17401 tgtcattaca ccggatatgt ataaacgcgt gatggactta ggcgttcatt gttcagtcgt
    17461 tggtggtgcg ataacacgac caaaagaaat tacgaaacgt tttgttcaag ttatggaaga
    17521 ttaaatgata acgataaaaa acgagatgac catcattaat taaaggtacc taattatctt
    17581 aggtggctca atgaatgtaa tgggttcatc tcgttttgtt tgtttatgat agtgatttta
    17641 ttttcaactt tatccaaaaa tgagtaaagc gacggggata gtgattaata gcgacaatgc
    17701 cacgcgtaaa aaccaaatga tgatgagttt ccagacaggt attttaattt cagttgctag
    17761 tatacatggc actaatgctg agaaaaagat aatggctgat acgcttacta caccgacgac
    17821 aaatttagta ctcattgcag ctttagttac taacaaagat ggtaaaaaca tttctacaat
    17881 agaaatcgct gaagcttttg caagtacagc ctgatcagca attgggaaaa tataaataaa
    17941 tggatagaat atatagccaa gccaatcaat gaatggtgta tagttcgcta caatcagtcc
    18001 taaaaaacca atcgataata tagagggcaa aataccaaca gtcatttcta aaccgtcttt
    18061 caaattgtcc caaacgttct tcacgaggga tggcgttaat gcattttgtt tcatcgcctc
    18121 tgcatatgca gttttcagtc tgcttccttc aatagcaact tcttgttctc cttcttgtcc
    18181 gttataatat tctgttgatt cattggtgat tggcggtagc catgcagtaa ttgcagtcac
    18241 gacaaatgtg atgactaaag ttatccaaaa gtataaattc caatgcggca ttaatcctaa
    18301 agttttagca acgataatca taaaagttgc tgaaactgtt gaaaagccag tcgcaataat
    18361 cgtggcttct cttttgttgt acatcccttg cttatagaca cgattagtaa tcaataatcc
    18421 taaggaataa ctgccgacaa acgaagccac tgcatcgaca gcggattttc ctggtgtttt
    18481 aaaaataggt ctcataatag gctccatata aacaccgaca aattctaata agccatagcc
    18541 tactaataaa gaaagcgcaa ttgcacctac tggaattaag atacttaatg gcatcattaa
    18601 tttttcaaac aaaaacggac catagttagc tttaaatagt attgatggac cgattttaaa
    18661 tacatacatt ataccgatta ttgcacctgc aactttaaat aatgtaatga ccaagtttgt
    18721 gattgaagtc ataaaagtac gtctcactat tggtaacgct gtaccaatta aaatcataat
    18781 cagtgcaaca tatggcataa gtggacctat gattgagcga atggctagat gaacatgatc
    18841 gacgaaaata gtgttgttac cattaatcgt aaaaggaata aagaaacata gtatgcccac
    18901 taaactatag acaaaaaaac gccatgcact tggttgttgt gcattagaat gatattgatt
    18961 cattaaagca acccctttgt ttaaatgaat acacaaaact gtatgatgca tcttcccctt
    19021 aatgagatga atcattattt taatttagaa aaatctgaaa acttaatata attgtatagt
    19081 ttgaattatt ttcagaccaa tacaaattaa ctaattatat atagattgaa actatatagc
    19141 ttaataaaat atttatctta aatgttgttg tgttgattca acgtcacaat taaagtgttt
    19201 ataaattatt tgaggataca gatatttgta aataattagt atcgatttaa tatcgtatta
    19261 ttaaattttt at
//
LOCUS       DALMNS010000054        19173 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.054, whole genome shotgun sequence.
ACCESSION   DALMNS010000054 DALMNS010000000
VERSION     DALMNS010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19173
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.054"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            216..1028
                     /gene="tagG"
                     /locus_tag="O6Y56_001542"
     CDS             216..1028
                     /gene="tagG"
                     /locus_tag="O6Y56_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acids export ABC transporter permease
                     subunit TagG"
                     /protein_id="HDB5574796.1"
                     /translation="MSAIGTVFKEHVKNFYLIQRLAQFQVKIINHSNYLGVAWELINP
                     VMQIMVYWMVFGLGIRSNAPIHGVPFVYWLLVGISMWFFINQGILEGTKAITQKFNQV
                     SKMNFPLSIIPTYIVTSRFYGHLGLLLLVIIACMFTGIYPSIHIIQLLIYVPFCFFLT
                     ASVTLLTSTLGVLVRDTQMLMQAILRILFYFSPILWLPKNHGISGLIHEMMKYNPVYF
                     IAESYRAAILYHEWYFMDHWKLMLYNFGIVAIFFAIGAYLHMKYRDQFADFL"
     gene            1127..2230
                     /locus_tag="O6Y56_001543"
     CDS             1127..2230
                     /locus_tag="O6Y56_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDB5574797.1"
                     /translation="MNVLIKKFYHLVVRILSKMITPQVIDKPHIVFMMTFPEDIKPII
                     KALNNSLYQKTVLTTPKQAPYLSELSDDVDVIEMTNRTLVKQIKALKSAQMIIIDNYY
                     LLLGGYNKTSNQRIVQTWHASGALKNFGLTDHQVDVSDKVMVQQYRKVYQATDFYLVG
                     CEQMSQCFKQSLGATEEQMLYFGLPRINKYYTADRATVKAELKDKYGITNKLALYVPT
                     YREDKADNRAIDKAYFEKCLPGYTLINKLHPSIEHSDIDDVSSIDTSTLMLMSDIIIS
                     DYSSLPIEASLLDIPTIFYVYDEGTYDKVRGLNQFYKAIPDSYKVYTEEDLIMTIQEK
                     EHLLSPLFKDWHKYNTDKSLHQLTEYIDKMVTK"
     gene            2227..3288
                     /locus_tag="O6Y56_001544"
     CDS             2227..3288
                     /locus_tag="O6Y56_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDB5574798.1"
                     /translation="MRLTIIIPTCNNEATIRQLLISIESKEHYRILCIDGGSTDQTIP
                     MIERLQRELKHISLIQLQNASIATCINKGLMDIKMTDSHDSDAFMVINPTSIVLPGKL
                     DRLTAAFKNNDNIDMVIGQRAYNYHGEWKLKSADEFIKDNRIVTLTEQPDLLTMMSFD
                     GKLFSAKFAELQCDETLANTYNHAILVKAMQKATDIHLVSQMIVGDNDIVPHATSNNE
                     DFNRYITEIMKIRQRVMEMLLLPEQRLLYSDMVDRILFNNSLKYYMNEHPAVTHTTIQ
                     LVKDYIMCMQHSDYVSQNMFDIINTVEFIGENWDREIYELWRQTLIQVGINRPTYKRF
                     LIQLKGRKFAHRTKSMLKR"
     gene            3351..3749
                     /gene="tagD"
                     /locus_tag="O6Y56_001545"
     CDS             3351..3749
                     /gene="tagD"
                     /locus_tag="O6Y56_001545"
                     /EC_number="2.7.7.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate cytidylyltransferase"
                     /protein_id="HDB5574799.1"
                     /translation="MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIK
                     HKKSYYDYEQRKMMLESIRYVDLVIPEKGWGQKEDDVEKFDVDVFVMGHDWEGEFDFL
                     KDKCEVIYLKRTEGISTTKIKQELYGKDAK"
     gene            complement(3866..5161)
                     /gene="pbp4"
                     /locus_tag="O6Y56_001546"
     CDS             complement(3866..5161)
                     /gene="pbp4"
                     /locus_tag="O6Y56_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein PBP4"
                     /protein_id="HDB5574800.1"
                     /translation="MKNLISIIIILCLTLSIMTPYAQAANSDVTPVQAGNQYGYAGLS
                     AAYEPTSAVNVSQTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTM
                     TNKEYIMSTLPELSNTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVD
                     LMNNKAKAIGMKNTHFVNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKE
                     TPKILDFTKQLAPTTHAVTYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKR
                     GKFRINQVIMGAGDYKNLGGEKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYY
                     VENDLYDVLPSDFSKKDYKLVVEDGKVHADYPREFINKDYGPPTVEVHQPIIQKANTV
                     AKSMWAEHPLFTIIGGACLVAGLALIVHMIINRLFRKRK"
     gene            5582..7309
                     /locus_tag="O6Y56_001547"
     CDS             5582..7309
                     /locus_tag="O6Y56_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574801.1"
                     /translation="MKRENPLFFLFKKLTWPVGLIVAAITISSLGSLSGLLVPLFTGR
                     IVDKFSVSHINWNLIALFGGIFVINALLSGLGLYLLSKIGEKIIYAIRSVLWEHIIQL
                     KMPFFDKNESGQLMSRLTDDTKVINEFISQKLPNLLPSIVTLVGSLIMLFILDWKMTL
                     LTFITIPIFVLIMIPLGRIMQKISTSTQSEIANFSGLLGRVLTEMRLVKISNTERLEL
                     DNAHKNLNEIYKLGLKQAKIAAVVQPISGIVMLLTIAIILGFGALEIATGAITAGTLI
                     AMIFYVIQLSMPLINLSTLVTDYKKAVGASSRIYEIMQEPIEPTEALEDSENVLIDDG
                     VLSFEHVDFKYDVKKILDDVSFQIPQGQVSAFVGPSGSGKSTIFNLIERMYEIESGDI
                     KYGLESVYDIPLSKWRRKIGYVMQSNSMMSGTIRDNILYGINRHVSDEELINYAKLAN
                     CHDFIMQFDEGYDTLVGERGLKLSGGQRQRIDIARSFVKNPDILLLDEATANLDSESE
                     LKIQEALETLMEGRTTIVIAHRLSTIKKAGQIIFLDKGQVTGKGTHSELMASHAKYKN
                     FVVSQKLTD"
     gene            7668..8897
                     /locus_tag="O6Y56_001548"
     CDS             7668..8897
                     /locus_tag="O6Y56_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDB5574802.1"
                     /translation="MFLLINIIGLIVFLGIAVLFSRDRKNIQWQSIGILVVLNLFLAW
                     FFIYFDWGQKAVRGAANGIAWVVQSAHAGTGFAFASLTNVKMMDMAVAALFPILLIVP
                     LFDILMYFNILPKIIGGIGWLLAKVTRQPKFESFFGIEMMFLGNTEALAVSSEQLKRM
                     NEMRVLTIAMMSMSSVSGAIVGAYVQMVPGELVLTAIPLNIVNAIIVSCLLNPVSVEE
                     KEDIIYSLKNNEVERQPFFSFLGDSVLAAGKLVLIIIAFVISFVALADLFDRFINLIT
                     GLIAGWIGIKGSFGLNQILGVFMYPFALLLGLPYDEAWLVAQQMAKKIVTNEFVVMGE
                     ISKDIASYTPHHRAVITTFLISFANFSTIGMIIGTLKGIVDKKTSDFVSKYVPMMLLS
                     GILVSLLTAAFVGLFAW"
     gene            9152..9244
                     /locus_tag="O6Y56_001549"
     CDS             9152..9244
                     /locus_tag="O6Y56_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574803.1"
                     /translation="MFCYYKQHKGDNFSIEEVKNIIADNEMKVN"
     gene            9422..10255
                     /locus_tag="O6Y56_001550"
     CDS             9422..10255
                     /locus_tag="O6Y56_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HDB5574804.1"
                     /translation="MNKTVKDLILVVLGSFIFAAGVNAFIISGNLGEGGVTGLAIILY
                     YAFHISPAITNFLVNAVLIAIGYKFLSKRSMYLTILVTILISIFLSLTESWQVETGNS
                     IVNAIFGGVSVGLGIGVIILAGGTTAGTTILARIATKYLDVSTPYALLFFDMIVVAIS
                     LTVIPLDKVLVTVISLYIGTKVMEYVIEGLNTKKAMTIISTNPDKLAKAIDEQIGRGL
                     TILNGHGYYTREEKDVLYVVISKTQVSKAKRLIKQIDKDAFLVIHDVRDVYGNGFFAD
                     E"
     gene            10537..11334
                     /locus_tag="O6Y56_001551"
     CDS             10537..11334
                     /locus_tag="O6Y56_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574805.1"
                     /translation="MNRLHGQQVKIGYGDNTIINKLDVEIPDGKVTSIIGPNGCGKST
                     LLKALSRLLAVKEGEVFLDGENIHTQSTKEIAKKIAILPQSPEVADGLTVGELVSYGR
                     FPHQKGFGRLTAEDKKEIDWAMEVTGTDTFRHRSINDLSGGQRQRVWIAMALAQRTDI
                     IFLDEPTTYLDICHQLEILELVQKLNQEQGCTIVMVLHDINQAIRFSDHLIAMKEGDI
                     IATGSTEDVLTQEILEKVFNIDVVLSKDPKTGKPLLVTYDLCRRAYS"
     gene            11370..12374
                     /locus_tag="O6Y56_001552"
     CDS             11370..12374
                     /locus_tag="O6Y56_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDB5574806.1"
                     /translation="MTNRENPTPLKFLSYIIGLSMILLITLFISTLIGDAKIQASTII
                     EAIFNYNPSNQQQNIINEIRIPRNIAAVIVGMALAVSGAIIQGVTRNGLADPALIGLN
                     SGASFALALTYAVLPNTSFLILMFAGFLGAILGGAIVLMIGRSRRDGFNPMRIILAGA
                     AVSAMLTALSQGIALTFRLNQTVTFWTAGGVSGTTWSHLKWAIPLIGIALFFILTISK
                     QLTILNLGESLAKGLGQNVTIIRGICLIIAMILAGIAVAIAGQVAFVGLMVPHIARFL
                     IGTDYAKILPLTALLGGILVLVADMIARYLGEAPVGAIISFIGVPYFLYLVKKGGRTI
                     "
     gene            12371..13387
                     /locus_tag="O6Y56_001553"
     CDS             12371..13387
                     /locus_tag="O6Y56_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDB5574807.1"
                     /translation="MISSNNKRRQWIALAVFSILLFLGCTWSITSGEYNIPVERFFKT
                     LIGQGDAIDELILLDFRLPRMMITILAGAALSISGAIVQSVTKNPIAEPGILGINAGG
                     GFAIALFIAIGKINADNFVYVLPLISILGGITTALIIFIFSFNKNEGVTPASMVLIGV
                     GLQTALYGGSITIMSKFDDKQSDFIAAWFAGNIWGDEWPFVIAFLPWVLIIIPYLLFK
                     SNTLNIIHTGDNIARGLGVRLSRERLILFFIAVMLSSAAVAVAGSISFIGLMGPHIAK
                     RIVGPRHQLFLPIAILVGACLLVIADTIGKIILQPGGVPAGIVVAIIGAPYFLYLMYK
                     TKNV"
     gene            13621..14589
                     /gene="dhaK"
                     /locus_tag="O6Y56_001554"
     CDS             13621..14589
                     /gene="dhaK"
                     /locus_tag="O6Y56_001554"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HDB5574808.1"
                     /translation="MMKKLINKKETFLTDMLEGLLIAHPELDLIANTVIVKKAKKEHG
                     VAIVSGGGSGHEPAHAGFVAEGMLDAAVCGEVFTSPTPDKILEAIKAVDTGDGVLLVV
                     KNYAGDVMNFEMAQELAEMEGINVETVIVRDDIAVTNEAQRRGVAGTVFVHKLAGYLA
                     EKGYSLTEIKSRVEALLPEIKSIGMAIEPPLVPTTGKYGFDIEDDKMEIGIGIHGEKG
                     IHREEVKDIDHIVGTLLDELYKEVTANDVILMVNGMGGTPLSELNIVTKYIQQNLAAR
                     TVNVAKWFVGDYMTSLDMQGFSITIVPNKPEYLEAFLAPTTSQYFK"
     gene            14631..15215
                     /gene="dhaL"
                     /locus_tag="O6Y56_001555"
     CDS             14631..15215
                     /gene="dhaL"
                     /locus_tag="O6Y56_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000867196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit L"
                     /protein_id="HDB5574809.1"
                     /translation="MKVNDMKARLLNLEETFKKHESELTELDRAIGDGDHGVNMVRGF
                     SSLKDKLDDSSMQSLFKSTGMALMSNVGGASGPLYGFSFVKMSAVAKDDMHNQDFITL
                     IQAFAEAVESRGKVTLNEKTMYDVVARAAEKLKNGETLTFNDLQQLADNTKDMVATKG
                     RAAYFGEESKGYIDPGAQSMVYILNALIGDEDND"
     gene            15208..15570
                     /locus_tag="O6Y56_001556"
     CDS             15208..15570
                     /locus_tag="O6Y56_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HDB5574810.1"
                     /translation="MTKIILVSHSKEIASGTKSLLKQMAGDVDIIPIGGLPDGSIGTS
                     FDIIQEVLTKLEDDALCFYDIGSSEMNVDMAIEMYDGNYRVLKVDAPIVEGSFIAAVK
                     LSIGGSIDDALAEIKQSF"
     gene            15686..16183
                     /locus_tag="O6Y56_001557"
     CDS             15686..16183
                     /locus_tag="O6Y56_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574811.1"
                     /translation="MQHLIKKHVLNGEFDLVRQLMSETDFMEFEEAYISSAHEVESMM
                     FYTCILDMIKYEESSEMHDLAFLLLVYPLSEYEGALDSAYYHADASIKLTDGKEVKSL
                     LQMLLLHAIPTPVISDKKAFDIAKQILKLDPNNNVARNVLKDTAKRMDNVVVDINELH
                     QRNAR"
     gene            16640..17707
                     /locus_tag="O6Y56_001558"
     CDS             16640..17707
                     /locus_tag="O6Y56_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574812.1"
                     /translation="MMMNKEATKIGFAYVGIVVGAGFSTGQEVMQFFTKYGLWAYLGV
                     IISGFILAFIGRQVAKIGTAFEATNHESTLQYVFGEKFSKVFDYILIFFLFGIAVTMI
                     AGAGATFEESYNIPTWLGALIMTLAIYVTLLLDFNKIVRALGVVTPFLIVLVVLIAGV
                     YLFKGHVSLAEVNQVVPEASIWKGIWFGTIYGGLAFSVGFSTIVAIGGDTEKRTVSGA
                     GAMYGGIIYTVLLALINFALQSEYPTIKNASIPTLTLANNIHPLIATVLSVIMLAVMY
                     NTILGLMYSFAARFTEPYSKKYHIFIIIMMVAGYLLSFVGFAELINKLYTIMGYVGLF
                     IVVAVIIKYFKRKNADKKHIA"
     gene            17858..18901
                     /locus_tag="O6Y56_001559"
     CDS             17858..18901
                     /locus_tag="O6Y56_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDB5574813.1"
                     /translation="MNKDNKWTMITALFITVISVLLAFHLKQHYDQTTNENHANKDKI
                     NIKNKNVRIYQNLTYNRVFPNSKLDIITPVDMSSNAKLPVIFWMHGGGYIAGDKQYKN
                     PLLAKIAEQGYIVVNVNYALAPQYKYPTPLIQMNQATQFIKENKMNLPIDFNQVIIGG
                     DSAGAQLASQFTAIQTNNQLREAMKFDQSFKPSQIKGAILFGGFYNMQTVRETEFPRI
                     QLFMKSYTGEEDWEKSFKNISQMSTVKQSTKNYPPTFLSVGDSDPFESQNIEFSKKLQ
                     ELNVPVDTLFYDGTHHLHHQYQFHLNKPESIDNIKKVLLFLSRNTSSSGIQTEEKPQI
                     ENPSNELPLNPLN"
BASE COUNT         6569 a         2666 c         3520 g         6418 t
ORIGIN      
        1 taatcatcaa tgataacaat gatatttaaa aactaaactt atttcaactt acatgattgt
       61 atactataat gtatttgtaa taaactaata ttttaaagaa ctagacaata attttgatag
      121 catccatgta tagtgatagt atttacaaca attattataa tactatttag ttaagtagag
      181 aaatagttaa acatttgaaa gtgtggttta atggaatgtc agcaatagga acagttttta
      241 aagaacatgt aaagaacttt tatttaattc aaagactggc tcagtttcaa gttaaaatta
      301 tcaatcatag taactattta ggtgtggcat gggaattaat taaccctgtt atgcaaatta
      361 tggtttactg gatggttttt ggattaggaa taagaagtaa tgcaccaatt catggtgtac
      421 cttttgttta ttggttattg gttggtatca gtatgtggtt cttcatcaac caaggtattt
      481 tagaaggtac taaagcaatt acacaaaagt ttaatcaagt atcgaaaatg aacttcccgt
      541 tatcgataat accgacatat attgtgacaa gtagatttta tggacattta ggcttacttt
      601 tacttgtgat aattgcatgt atgtttactg gtatttatcc atcaatacat atcattcaat
      661 tattgatata tgtaccgttt tgttttttct taactgcctc ggtgacgtta ttaacatcaa
      721 cactcggtgt gttagttaga gatacacaaa tgttaatgca agcaatatta agaatattat
      781 tttacttttc accaattttg tggctaccaa agaaccatgg tatcagtggt ttaattcatg
      841 aaatgatgaa atataatcca gtttacttta ttgctgaatc ataccgtgca gcaattttat
      901 atcacgaatg gtatttcatg gatcattgga aattaatgtt atacaatttc ggtattgttg
      961 ccattttctt tgcaattggt gcatacttac acatgaaata tagagatcaa tttgcagact
     1021 tcttgtaata tatttatatg acgaaacccc gctgaccatt aataaatgga agtggggttc
     1081 atttttgttt ataatttaag taaataacat attaagttgg tgtattatga acgttttaat
     1141 aaagaaattt tatcatttgg tagttcgaat actttctaaa atgattacgc ctcaagtgat
     1201 tgataaaccg catatcgtat ttatgatgac ttttccagaa gatattaagc ctatcatcaa
     1261 agcattaaat aattcgttgt atcagaaaac tgttttaaca acaccaaaac aagcgcctta
     1321 tttatctgaa cttagcgacg atgttgatgt gatagaaatg actaatcgaa cattggtaaa
     1381 acaaattaag gctttgaaaa gcgcgcagat gattattatc gataattatt acctattact
     1441 aggtggatat aataagactt ctaatcaacg cattgttcaa acgtggcatg caagtggtgc
     1501 attaaaaaac tttggcttaa cagatcatca agtcgatgtg tctgacaagg taatggttca
     1561 gcagtatcgt aaagtttatc aagcgacgga tttttactta gtgggttgtg aacaaatgtc
     1621 acaatgtttt aaacagtctt taggtgcaac agaagagcaa atgttgtatt ttgggcttcc
     1681 gagaattaat aaatattaca cagctgatag agcaacggtt aaggcagagt taaaggataa
     1741 atatggaatt acaaataagt tggcattata tgtaccaaca tatagagaag ataaagcaga
     1801 taatagggct attgataaag cttattttga aaaatgttta ccaggatata cactgattaa
     1861 taaattacat ccatcaattg aacattcaga cattgatgac gtatcttcaa tcgacacgtc
     1921 tacattaatg ttaatgtcag atataattat tagcgactat agttcgctgc caatagaggc
     1981 tagcttgtta gatattccaa ctatatttta tgtgtatgat gaaggaacat atgataaggt
     2041 gagaggcctg aatcaatttt acaaagcaat accggatagc tacaaagtgt atactgaaga
     2101 agatttaata atgacgatac aagaaaaaga acatctatta agtccgttat ttaaagattg
     2161 gcataagtat aatactgata aaagtttaca tcagctcaca gaatatatag ataagatggt
     2221 gacaaaatga ggcttacgat aatcatacct acatgtaata atgaggcaac aattcgacaa
     2281 ttgttaatat ctattgagag taaagaacac tatagaatcc tttgtattga tggtggttct
     2341 actgatcaaa caattcctat gattgaacgg ttacaaagag aactcaagca tatttcatta
     2401 atacaattac aaaatgcttc gatagctacg tgtattaata aaggtttgat ggatatcaaa
     2461 atgacagatt ctcatgatag tgacgcattt atggtcataa atccaacatc aatcgtattg
     2521 ccaggtaaat tagataggct aactgcagca ttcaaaaata atgataatat tgatatggta
     2581 atagggcagc gagcttacaa ttaccatggt gaatggaaat tgaaaagtgc tgatgagttt
     2641 attaaagaca atcgaatcgt tacattaacg gaacaaccag atttgttaac aatgatgtct
     2701 tttgacggaa agttattcag tgctaaattt gctgaattac agtgtgacga aactttagct
     2761 aacacataca atcacgcaat acttgtcaag gcgatgcaaa aagctacgga tatacattta
     2821 gtttcacaga tgattgtcgg agataatgat atagttccac atgctacaag taacaatgaa
     2881 gattttaata gatatatcac agaaattatg aaaataagac aacgagtcat ggaaatgtta
     2941 ctattacctg aacaaaggct attatatagt gatatggttg atcgtatttt attcaataat
     3001 tcattaaagt attatatgaa tgaacaccca gcagtaacgc acacgacaat tcaactcgta
     3061 aaagactata ttatgtgtat gcagcattct gattatgtat cacaaaatat gtttgacatt
     3121 ataaatacag ttgaatttat tggtgagaat tgggatagag aaatatacga attgtggcga
     3181 caaacattaa ttcaagtggg cattaatagg ccgacttata aaagattctt gatacaactt
     3241 aaagggagaa agtttgcaca tcgaacaaaa tcaatgttaa aacgataacg tgtacattga
     3301 tgaccataaa ctgcaatcct atgatgtgac aatatgagga ggataactta atgaaacgtg
     3361 taataacata tggcacatat gacttacttc actatggtca tatcgaattg cttcgtcgtg
     3421 caagagagat gggcgattat ttaatagtag cattatcaac agatgaattt aatcaaatta
     3481 aacataaaaa atcttattat gattatgaac aacgaaaaat gatgcttgaa tcaatacgct
     3541 atgtcgattt agtcattcca gaaaagggct ggggacaaaa agaagacgat gtcgaaaaat
     3601 ttgatgtaga tgtttttgtt atgggacatg actgggaagg tgaattcgac ttcttaaagg
     3661 ataaatgtga agtcatttat ttaaaacgta cagaaggcat ttcgacgact aaaatcaaac
     3721 aagaattata tggtaaagat gctaaataaa ttatatagaa ctatcgatac taaacgataa
     3781 attaacttag gttattataa aataaatata aaacggacaa gtttcgcagc tttataatgt
     3841 gcaacttgtc cgtttttagt atgttttatt ttctttttct aaataaacga ttgattatca
     3901 tatgaacaat tagtgctaat ccagcgacaa ggcatgcacc accaatgata gtgaataatg
     3961 gatgttctgc ccacatactt ttagcaacag tatttgcctt ttgaataatt ggctgatgaa
     4021 cttctacagt tggaggccca taatctttat taataaattc tcttggatag tccgcgtgta
     4081 ctttaccatc ttcgactaca agtttataat cttttttact aaaatcactt ggtaaaacat
     4141 cgtaaagatc attttcaaca taatatttct taccatttat cctttgctca cctttagaca
     4201 atatttttac atatttatac tgatcaaatg aacgttccat taatgcattc cccatcatat
     4261 tacgttgctt ctcgccacca aggtttttat agtctcctgc acccatgata acttgattaa
     4321 ttctaaattt acctcgtttg gtagtaatcg tatggttgta atttgctgta tcacttgatc
     4381 cagtttttaa accatctgta ccaggcaaac tcatttttgc accttctaat gaaaagttga
     4441 atgtgtaata cgtaactgca tgcgttgttg gtgctaactg ctttgtaaag tctaatattt
     4501 taggtgtctc tttaatcacg tgtaaatcta aaatggcata gtctctagca gttgttacag
     4561 tacgttcttg gtctttatac tttgttggtg caaatgtacg taatcttgaa ttttcagcac
     4621 ctgttggatt gacgaaatgt gtatttttca ttccgatagc tttagctttg ttattcatta
     4681 aatcaacgaa atcgctggtg ttttttgata ccttcttagc taaaattaat gccgcggcat
     4741 tgctagaatt agatactgta atttgtaata ggtctgcgat tgtccatact tgtccaggat
     4801 atagcttcgt attactcagc tcaggtagtg tagacataat atattctttg ttcgtcattg
     4861 tgacagtgtc atcaagtgaa agctgcccct tatttacagc ttccaatgtt aagtacattg
     4921 tcattaattt agtcatagac gctggattcc acttagtatc gatattgtat tgatacagta
     4981 attgtccagt ttgacttaca ttaacagcac tcgttggttc gtatgcagcc gacaaacctg
     5041 cataaccata ttgatttcct gcttgtacag gggttacgtc actgttagca gcttgtgcat
     5101 atggtgtcat aatacttaat gttaaacata aaatgatgat aatagatatt aaatttttca
     5161 taaagcgtta atcttccctt ttccaattct taaatattcc ctaaaagcaa tggtcattcc
     5221 tacttacgga aatcattgct aattcacttc accttaatta aattgttgaa aataaagttt
     5281 tctgtagtta atttgaaaaa taatgcaaat atattacgtg cgtagctaaa ggtgttataa
     5341 tgtttgtacg aagagcaaac ttactcaaaa gcgattaatt atcatgtttt aatataaaga
     5401 ctttgagaag ttattacaaa aaatgcaata gaaatattct atcatataaa tgttatgagc
     5461 ggtattttgg ggcaatactt tatttgattt ttaaagtttt gttgggagaa agtatatgat
     5521 agaaatgcat gtatctatct aaatgaatta actataaatt tcaaacagaa gaggtaaaac
     5581 tatgaaacga gaaaatccat tgtttttctt atttaaaaaa ctaacatggc cagtgggtct
     5641 tatcgttgca gctatcacta tttcatcact agggagctta agtggactat tagtgccact
     5701 gtttactgga cgaattgtag ataaattttc cgtgagccat atcaattgga acctaatcgc
     5761 attatttggt ggtatctttg tcatcaatgc tttattaagc ggattaggtt tatatttatt
     5821 aagtaaaatt ggtgaaaaaa ttatttatgc gatacgctca gttttatggg agcatatcat
     5881 acaattaaaa atgccattct ttgacaaaaa tgaaagtggt caattaatga gtcgattaac
     5941 tgatgatacg aaagtgataa atgaatttat ttcacaaaag ctacctaact tattaccatc
     6001 aatcgttaca ttagttgggt cactaatcat gttatttatt ttagattgga aaatgacatt
     6061 attaacattt ataacgatac cgatatttgt tttaattatg attcctctag gacgtattat
     6121 gcaaaagata tcgacaagta cacaatctga aattgcaaac ttcagtggtt tgttagggcg
     6181 tgtcctaact gaaatgcgtc ttgttaaaat atcaaataca gagcgacttg aattagataa
     6241 tgcacataaa aatttgaatg aaatatataa attaggttta aaacaggcta aaattgcggc
     6301 agttgtacaa ccaatttcag gtattgttat gttgctaaca attgcaatta ttttaggttt
     6361 tggtgcatta gaaattgcga ctggtgcaat cactgcaggt acattaattg caatgatatt
     6421 ttatgttatt caattatcga tgcctttaat caatctttca acgttagtta cagattataa
     6481 aaaggcagtt ggtgcaagta gtagaatata cgaaatcatg caagaaccta ttgaaccgac
     6541 agaagctctt gaagattctg aaaatgtatt aattgatgac ggtgtgttgt catttgaaca
     6601 tgtagacttt aaatatgatg tgaagaaaat attagatgat gtgtcattcc aaatcccaca
     6661 agggcaagtg agtgcttttg taggtccttc tggatctggt aaaagtacga tatttaatct
     6721 gatagaacgt atgtatgaaa ttgagtcagg tgatattaaa tatggccttg aaagtgtcta
     6781 tgatatcccg ttatctaagt ggcgacgtaa aattggatat gttatgcaat caaattcgat
     6841 gatgagtggt acaattagag acaatatttt atacggaatt aatcgtcatg tttcagatga
     6901 agaacttatt aattatgcta aattagctaa ctgtcatgat tttatcatgc aatttgatga
     6961 aggatatgac acgcttgtag gtgaacgagg attgaaactg tctggcggac aacgtcaacg
     7021 tattgatatt gctagaagtt ttgttaaaaa tcctgatatt ttgttacttg atgaagcaac
     7081 agctaatctc gatagtgaaa gtgaattgaa aattcaagaa gctttagaaa cattgatgga
     7141 aggtagaaca acgattgtca ttgcgcatcg tttgtctaca attaaaaaag ccggtcaaat
     7201 tatattctta gacaaaggac aggtaacagg taaaggtacg cattcagaac tgatggcatc
     7261 acatgcgaag tataaaaatt ttgtagtgtc tcaaaaatta acagattaat tttatatata
     7321 taagtaagct tggagcaaat acacatatac catcgaggaa attaaagtgt ggcacattga
     7381 tggatataga tgttaataaa ttgcttcaag cttttgtcta ttttaaatca tttgagaagt
     7441 tacgacataa taattcttaa attaatgaaa tcgatatttt aagaaaaaaa tgctcatggt
     7501 ataatacaag ttataagcaa acatacatat attaaatact gtagccacga gtcataattc
     7561 ttcatatttt acatagcaat ttaactgatt ttagagtcca cggtacagaa gtttgatatt
     7621 tcaatgtttc taaattttta aaaaattaaa tcataggtgg gtgccaaatg tttttattaa
     7681 tcaacattat tggtctaatt gtatttcttg gtattgcggt attattttca agagatcgca
     7741 aaaatatcca atggcaatca attgggatct tagttgtttt aaacctgttt ttagcatggt
     7801 tctttattta ttttgattgg ggtcaaaaag cagtaagagg agcagccaat ggtatcgctt
     7861 gggtagttca gtcagcgcat gctggtacag gttttgcatt tgcaagtttg acaaatgtta
     7921 aaatgatgga tatggctgtt gcagccttat tcccaatttt attaatagtg ccattatttg
     7981 atatcttaat gtactttaat attttaccga aaattattgg aggtattggt tggttactag
     8041 ctaaagtaac aagacaacct aaattcgagt cattctttgg gatagaaatg atgtttttag
     8101 gaaatactga agcattagcc gtatcaagtg agcaactaaa acgtatgaat gaaatgcgtg
     8161 tattaacaat cgcaatgatg tcaatgagct ctgtatcggg agctattgta ggtgcgtatg
     8221 tgcaaatggt accaggagaa ctggtactaa cggcaattcc actaaatatc gttaacgcga
     8281 ttattgtgtc atgcttgttg aatccagtaa gtgttgaaga gaaagaagat attatttaca
     8341 gtcttaaaaa caatgaagtt gaacgtcaac cattcttctc attccttgga gattctgtat
     8401 tagcagcagg taaattagta ttaatcatca tcgcatttgt tattagtttt gtagcgttag
     8461 ctgatctatt tgatcgtttt atcaatttga ttacaggatt gatagcagga tggataggca
     8521 taaaaggtag tttcggttta aaccaaattt taggtgtgtt tatgtatcca tttgcgctat
     8581 tactcggttt accttatgat gaagcgtggt tggtagcaca acaaatggct aagaaaattg
     8641 ttacaaatga atttgttgtt atgggtgaaa tttctaaaga tattgcatct tatacaccac
     8701 accatcgtgc ggttattaca acattcttaa tttcatttgc aaacttctca acgattggta
     8761 tgattatcgg tacattgaaa ggaattgttg ataaaaagac atcagacttt gtatctaaat
     8821 atgtgcctat gatgctatta tcaggtatcc tagtttcatt attaacagca gctttcgttg
     8881 gtttatttgc atggtaatat gtcgaagaga gactatgata atacatttta actaataaat
     8941 aggttcaagc atgtcgtcta ttgatatagg tgagatgctt ggactttttt attattgata
     9001 taaagatatt taaatatttt taaagttacc gaaattgaag cattataaaa accaagtgca
     9061 catggtaata cacttggctt ttatgggaaa tgaatattat tgtacatatg acagtaagga
     9121 ctaggtacag tcatagtact tcgagcaaaa tttgttttgt tattataaac aacacaaagg
     9181 agataacttc tctattgaag aagttaaaaa cattatagca gacaatgaaa tgaaagtaaa
     9241 ttaaaaattc agaatatttt taattattgt attgtgagtg atatttatta gggaaagtta
     9301 ttcttcatat aaattagtta aatagtaaat ctttgttaga actctttcca tagagttgtg
     9361 acagtatttt tgttatgcta ctatttttat agtctaataa atatataaag gggatggttt
     9421 cgtgaataaa acggttaaag atttaatact agttgtctta ggttcattta tctttgctgc
     9481 aggtgtaaat gcatttatta tttctggtaa cttaggtgaa ggcggggtta caggtttagc
     9541 aattatttta tattatgcgt ttcatatttc accagccatc actaacttct tggtcaacgc
     9601 agtattgatt gccataggtt ataaattttt gagtaagaga agtatgtact taactattct
     9661 tgtaacaatt cttatttcaa tatttttgag tttaacagaa tcatggcaag tagaaactgg
     9721 aaacagtatt gtgaatgcca tttttggtgg tgtaagcgtt ggactaggaa tcggagtaat
     9781 tatccttgca ggcggtacaa cagcaggtac aacaattttg gcgagaattg caacgaaata
     9841 cctcgatgta agcacgccat atgctttgct tttcttcgat atgatcgttg ttgcaatttc
     9901 acttacagtt attccacttg ataaagtatt agtaacagta atatcacttt atataggaac
     9961 aaaagtgatg gaatatgtca tagaaggttt aaacactaaa aaagctatga cgattatttc
    10021 aactaatccc gacaaacttg ccaaagcaat agacgagcaa attggaagag gtttaaccat
    10081 tttaaacgga catggttatt atacgcgtga agaaaaagat gtcttatacg ttgttatttc
    10141 taaaacacaa gtttccaaag caaagcgatt aattaaacaa atcgataaag atgcattcct
    10201 cgtaattcat gatgtaagag atgtctatgg taatggcttt tttgcagatg aataaataaa
    10261 tggtatgagc acacatactt aaatagaagt ccacggacaa gtttttgaat tatgaagact
    10321 tatctgtggg cgtttttaat tttataaaag taatatacaa gacataacaa atcgagctat
    10381 ctaatttaaa aagtaatgtt agtcaataag attgaaaaat gttataatga tgttcgtgat
    10441 aatcattatc aattgggatg cctttgaaaa ttgataattt aaaaatagaa attatttttt
    10501 ataaacagaa agaattttat tgaaagtagg gaaattatga atcgtttgca tggacaacaa
    10561 gttaaaattg gttacgggga taacacgatt ataaataaat tagatgttga aataccagat
    10621 ggcaaagtga cgtcaatcat tggtcctaac ggctgcggga aatctacttt gctaaaggca
    10681 ttgtcacgtt tattggcagt taaagaaggt gaagtatttt tagatggtga aaatattcat
    10741 acacaatcta cgaaagagat tgcaaaaaaa atagctattt tacctcaatc acctgaagta
    10801 gcagatggct taactgttgg agaattagtt tcatatggtc gttttccaca tcaaaaagga
    10861 tttggtagat taactgctga ggataagaaa gaaattgatt gggcaatgga agttacagga
    10921 actgatacat tccgacaccg ttcaatcaat gatttaagtg gtggtcaaag acaacgtgtt
    10981 tggattgcaa tggcattagc acaaagaact gatattatct ttttagacga accaacaaca
    11041 tatttagata tctgtcatca attagaaata ctagaattag ttcagaagct aaatcaggaa
    11101 caaggttgta caattgtcat ggttcttcat gatatcaacc aagcgattcg tttctcagat
    11161 catcttattg cgatgaaaga aggcgatatc atcgctacag gttcaacaga agacgtatta
    11221 acacaggaaa ttttagaaaa agtttttaat attgatgttg ttttaagtaa agatcctaag
    11281 actggaaaac cgttactggt aacttatgac ttatgtcgca gagcttattc ttaattaagt
    11341 aagttaatat gataaaaagg acaattaaca tgacaaatag agagaatcca acgccattga
    11401 agtttttatc ctatattata ggtttaagta tgatactact aatcacacta tttatttcta
    11461 cattaatagg tgacgccaaa attcaagcct ctacaattat agaggctatt tttaattata
    11521 atcctagcaa tcaacagcaa aacatcatca atgagattag gattcccaga aatatagcag
    11581 cagtaattgt gggtatggcg cttgcagttt ctggtgcgat tatacaaggt gttactcgta
    11641 atggtcttgc tgatccggcg ctcataggtt taaattcagg tgcttcattt gctttagcat
    11701 taacatatgc agttttacca aacacttcat ttttaatatt gatgtttgct ggatttttag
    11761 gtgctattct aggaggtgct attgtattaa tgataggccg atctagacgt gatggattta
    11821 atccgatgcg tattatttta gcgggtgcag cagtaagtgc tatgttaaca gcgctaagtc
    11881 aaggtattgc attaactttt agactaaatc aaacagtaac attttggact gctggaggcg
    11941 tttcaggcac aacgtggtca caccttaagt gggcaattcc attaattggt attgcgttat
    12001 tctttatatt aacaattagt aaacaactta ccattttaaa tcttggtgaa tcattagcta
    12061 aaggtttagg tcaaaatgta acaataatca gaggcatatg tttaattatt gctatgattc
    12121 tagcaggtat agcagttgct atcgctggac aagttgcatt tgtaggtttg atggtgcctc
    12181 atatagcaag atttttaatt ggaactgatt atgctaaaat tctaccatta acagccttgt
    12241 taggtgggat actcgtgctt gttgccgata tgatagcacg atatttagga gaagcgcctg
    12301 ttggtgcaat catttcattt attggtgttc cttacttttt atatttagtt aaaaaaggag
    12361 gacgcacaat atgattagtt caaataataa acgcagacaa tggatagcac tggctgtttt
    12421 tagcattcta ctatttctag gttgtacttg gagtattacc tcaggtgaat acaacatacc
    12481 tgtagaaaga tttttcaaaa ctttaattgg acaaggtgat gccattgatg agttaatctt
    12541 attagatttc agattacctc ggatgatgat tactattttg gctggcgcag cgcttagtat
    12601 tagtggtgca atagtgcaaa gtgtcacgaa aaatccaata gctgaaccag gtatattagg
    12661 tattaacgca ggcggcggat ttgcaatcgc attatttatt gcaattggta aaattaatgc
    12721 tgacaacttt gtttatgtac tgccgttaat aagtatacta ggtggtatca ccactgcatt
    12781 gattattttt attttcagtt ttaataaaaa tgaaggtgtt acacctgcga gtatggtatt
    12841 aataggtgta ggtttacaaa cagcattata tggtggctca attacaatta tgtcaaaatt
    12901 tgatgataag caatctgatt tcatcgctgc ttggtttgca ggtaatattt ggggtgacga
    12961 atggccattt gtcattgcat ttttaccgtg ggtgttgatt attattcctt acttactatt
    13021 taaatcgaat acactaaata ttattcatac aggtgataat attgcacgag gtctaggtgt
    13081 aaggttaagc agagaacgtt taatattatt ctttatcgca gtgatgttat catctgctgc
    13141 tgtagcagta gcaggttcaa tttcgtttat cggattaatg ggcccgcata ttgccaaacg
    13201 tatcgttgga ccacgtcacc agttgttttt accaattgcc attttagtag gggcatgttt
    13261 acttgttata gctgatacaa ttggcaaaat tatattacaa ccaggtgggg ttccagcagg
    13321 tatagtcgta gcaattattg gtgcaccgta tttcttatat ttaatgtaca aaacgaaaaa
    13381 tgtatagtgt caaaggacac aacttattgc tatgaaaggc actttattat aaggcttttc
    13441 atagcatttt ttatttaatg agccactcga tactatttat tttttcaata atgaaccatt
    13501 aagtcatcaa gacggtctga tcaaaaatat atttgataac ggtatcaggt taattcttta
    13561 tgatagcgca ttcatttatt ctgttttata ctatgactga taataccaag gaggtacaac
    13621 atgatgaaaa agttaatcaa taaaaaagaa acatttttaa ctgatatgct tgaaggattg
    13681 ttaattgcgc acccagagtt agatctgatt gctaatacag ttattgtaaa aaaagctaag
    13741 aaagaacatg gtgtagcaat agtctctgga ggtggaagcg gacatgaacc tgcgcatgcc
    13801 ggttttgttg cagaaggtat gctagatgca gcggtttgtg gcgaagtatt tacatcacct
    13861 acaccagata aaatattaga agctattaaa gcagtagata ctggtgacgg tgtattacta
    13921 gttgtaaaaa actatgcagg tgacgtgatg aatttcgaaa tggcacaaga gcttgcagaa
    13981 atggaaggta taaatgttga aactgttatt gttcgtgacg acattgctgt gacaaacgaa
    14041 gcacaacgtc gtggtgttgc aggaacggtg tttgttcata agcttgccgg ttatcttgct
    14101 gaaaaaggtt attcattaac agagattaaa tcgcgtgtag aagcgttgtt acctgaaatt
    14161 aaaagtattg gtatggcaat tgaaccaccg cttgttccaa ctactggaaa atatggcttt
    14221 gatattgaag acgacaaaat ggaaatcggt attggtatac atggtgaaaa aggtattcat
    14281 agggaagaag taaaggatat tgatcatatt gttggaacat tgttagacga attgtataaa
    14341 gaagttactg ccaatgatgt catattaatg gtaaatggta tgggtggtac gccgttatct
    14401 gaattaaata tcgtaactaa atatattcaa caaaatttgg ctgcaagaac ggttaatgtt
    14461 gctaaatggt ttgttggtga ttatatgaca tctttagaca tgcaaggttt ttctataact
    14521 atcgtgccta ataaaccaga atatttggaa gcatttttag caccaacaac aagtcaatac
    14581 tttaaataag aagtgaatat gaataaatat acatttatga ggtgacacaa atgaaagtga
    14641 atgatatgaa agcacgttta ttaaatttag aagaaacatt taaaaaacat gaatctgaat
    14701 taactgaatt agatcgagca attggtgatg gtgaccacgg ggttaacatg gttcgtgggt
    14761 ttagtagtct taaagacaaa cttgatgata gctcaatgca atcattgttc aaatcgactg
    14821 gtatggcatt gatgtcaaat gttgggggtg catcaggacc actgtatggc tttagctttg
    14881 ttaaaatgtc tgcagtcgcc aaagatgata tgcataatca agatttcatt acactaattc
    14941 aggcatttgc cgaagcggtt gaatcacgtg gtaaagttac tttaaatgaa aagacaatgt
    15001 atgatgtagt agcgcgagca gcagagaagc ttaaaaatgg tgaaacttta acattcaatg
    15061 atttacagca attagcagat aatacaaaag atatggtagc aacgaaaggt agagctgcat
    15121 attttggaga agaatcaaaa ggttatatag atccaggtgc tcaaagtatg gtttatattt
    15181 taaacgcttt gattggagat gaagataatg actaaaatta tacttgttag ccacagtaaa
    15241 gaaattgcaa gtggtacaaa atctttgtta aagcaaatgg ctggtgacgt tgatattata
    15301 ccaatagggg gattaccaga tggttcaatt ggaacttcat ttgatatcat ccaagaagtt
    15361 ttgactaaat tagaggatga tgcattgtgt ttttacgata ttggatcttc agaaatgaat
    15421 gtagatatgg caattgaaat gtatgatggg aattatcgtg tgttaaaagt tgatgcacca
    15481 attgttgaag gcagttttat tgcagcagta aaactgtcaa tcggcggttc aattgatgat
    15541 gcattagcag aaatcaaaca atcattttag ttaaaattta ctaataatga aaaatgtaaa
    15601 cctttttcaa atgaaacttt ataaaaaata tgatagtata tatgtaaatg tttaataaaa
    15661 tctggagaaa taggaggaca ttgccatgca acaccttata aaaaaacatg tattgaatgg
    15721 cgagtttgat ttagtacgac aattgatgtc cgaaacagat tttatggaat ttgaagaagc
    15781 atatatttca agtgcgcatg aagtagaaag tatgatgttt tatacatgta ttttagatat
    15841 gattaagtac gaagaatcat ctgaaatgca tgacttagca tttttattgc ttgtgtatcc
    15901 actaagtgaa tatgaaggtg ctttggattc tgcttattat catgcagacg cttccataaa
    15961 acttactgac ggcaaagaag ttaaaagttt gttacaaatg ttattattgc atgcgatacc
    16021 aacacctgtt atttcagata agaaggcttt tgatatcgcc aagcaaattt taaaattaga
    16081 tcctaataat aatgttgctc gtaacgtctt aaaagacact gccaaacgta tggacaacgt
    16141 tgttgttgat ataaatgaat tacaccaacg taatgcacgt taattacatt tcaattatat
    16201 tagcttaata atagttttaa catttggttg ggttgggaca tatgttccag ccttttttaa
    16261 tacttaaaaa ctaacgaagt aaacttgtgt gcacaaatgt tttttataca acattttata
    16321 aatttataca ttttaataaa gaacatacga tagatagttt aaaccttttt aactgagaaa
    16381 ttttgatatg tatttttcga aatttaacta aaaatacgta agtcaagaag cacaattatt
    16441 aatcattttt cctatacaaa agttcgtatg actgcattat aaaagcataa atttataatt
    16501 tttttaaatg tcattgaacg tgataatgtg aatggattga gcaattttga aaaagtgaaa
    16561 aataacctat gcgacttgca attaattttc agtacgttat aatgcacact gtgcaaaatt
    16621 aaggaggtct attattcaca tgatgatgaa taaagaagca acaaaaattg gatttgccta
    16681 cgtcggcatt gtagtgggcg caggattttc aacaggacaa gaagttatgc aatttttcac
    16741 taaatatggc ttgtgggctt atttaggtgt cattatatct ggttttattt tagcttttat
    16801 tgggcgccaa gtagcaaaaa ttggtactgc ctttgaagcg acaaaccatg aatcaacatt
    16861 acaatacgta ttcggtgaaa agtttagtaa agtctttgat tatattttaa tcttcttctt
    16921 atttggtata gctgtaacca tgatagcagg tgcaggcgca acatttgaag aaagttataa
    16981 catacctaca tggctaggtg cattaattat gacattagca atttatgtaa cattgctatt
    17041 agactttaat aaaatagtac gtgcccttgg tgtcgttaca ccatttttaa ttgttttagt
    17101 tgtattaatc gctggcgttt atttatttaa aggtcatgtt tcattagcag aagttaacca
    17161 agtagtgcct gaagcaagta tctggaaggg aatctggttt ggtacaatat atggtggatt
    17221 agctttttct gtaggtttta gtaccatcgt agcaatcggt ggggatactg aaaagcgtac
    17281 agtgtcaggt gcaggcgcga tgtatggtgg tattatctac actgtattac tagcattgat
    17341 caactttgca ttgcaaagtg aatatccaac tattaaaaat gcctcaattc caacattgac
    17401 gttagcaaat aatatccatc ctttaatagc aacagtgtta tctgttatta tgctggcggt
    17461 tatgtataat actattctag gactaatgta ttcatttgca gcacgtttta cagaaccata
    17521 cagtaaaaaa tatcatatct ttattattat aatgatggta gcaggttatt tattaagttt
    17581 cgtaggattt gctgaattaa ttaataagtt atatacaatt atgggatatg taggcttatt
    17641 tattgtagta gctgtaatta ttaaatattt caaacgtaaa aatgcggata aaaaacatat
    17701 tgcttaatat catatgatgg atatccgaaa ctttacaatt gaatcacttt gttttaacct
    17761 taaaagcaat tcgtctctac tcttatcggg cgaattgctt tttatattta ttcagtcttt
    17821 taatatgagc gtctaacaaa tagagaggta cgatgtaatg aataaagata ataaatggac
    17881 gatgataact gcgcttttta taactgtaat cagtgtattg ttagcatttc atctgaaaca
    17941 acattatgac caaactacaa atgagaacca tgctaataaa gacaaaatta atattaaaaa
    18001 taaaaatgtg cgtatttatc aaaaccttac atacaataga gttttcccta acagtaaatt
    18061 agatattatt acacctgttg atatgtcttc taatgccaaa ctgccagtta ttttttggat
    18121 gcacggtggt ggttatattg cgggtgataa gcagtataaa aacccattat tagcgaaaat
    18181 tgctgaacaa gggtacattg ttgtgaatgt aaattatgca ttggcgccac aatataaata
    18241 tcccactcca ttaattcaaa tgaatcaagc aactcaattc attaaagaaa ataaaatgaa
    18301 tttacctatt gattttaatc aagtaattat tggcggtgat tctgcaggtg ctcaattagc
    18361 tagccaattt actgcaatac agacaaacaa tcaattaaga gaagccatga aatttgatca
    18421 gtcattcaaa ccatcgcaaa ttaaaggtgc tatactattt ggtggttttt ataatatgca
    18481 aacagttaga gaaactgagt ttccaagaat acagttattt atgaaaagtt atactggcga
    18541 agaagattgg gaaaagagtt ttaaaaatat ttcacaaatg tcgacagtaa aacaatcgac
    18601 aaaaaattat ccaccaacat ttttatctgt tggagatagc gatccattcg aaagtcaaaa
    18661 tatagaattc agtaagaaat tacaagaatt gaatgtacca gtagatactt tgttttatga
    18721 tggtacgcat catttacatc atcagtatca atttcacctt aataaacctg aatcgataga
    18781 taatatcaaa aaagtgttac ttttcttaag tcgtaataca tcttctagtg gtattcaaac
    18841 tgaagagaaa ccacaaatag aaaatccgag taatgaatta ccgttaaatc ctttaaacta
    18901 atgataaaca gtagtaattt attacttaag taacatttaa gatcttcaaa ttgaaaacga
    18961 agaatttaaa acatgtgggg ctaatgtgta agagtctgag atataataaa ttgttagcgg
    19021 ttctttatca tttctatctc accctattat gatgtgacat ttattttaca aactaatttg
    19081 ttttgaacct gaaaataact ttttacaact aaattgtcga aaaacagtgt gtacatgata
    19141 taataaattt ataaattgaa aagaattcaa aag
//
LOCUS       DALMNS010000055        19015 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.055, whole genome shotgun sequence.
ACCESSION   DALMNS010000055 DALMNS010000000
VERSION     DALMNS010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 19015)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19015)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19015
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.055"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            300..1271
                     /locus_tag="O6Y56_001560"
     CDS             300..1271
                     /locus_tag="O6Y56_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HDB5574814.1"
                     /translation="MSQQDLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQ
                     LEGLNFDRHGQLFLLDVFEGNIFKVNPETKEIKQPFVSHKANPAAIKIHKDGRLFVCY
                     LGDFKSTGGIFAATENGDNIQDIIEDLSTTYCIDDMVFDSKGGFYFTDFRGYSTNPLG
                     GVYYVAPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQP
                     FGATIPYYFTGHEGPDSCCIDRDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGH
                     MLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAKGHQSFQFQ"
     gene            complement(1414..1929)
                     /locus_tag="O6Y56_001561"
     CDS             complement(1414..1929)
                     /locus_tag="O6Y56_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HDB5574815.1"
                     /translation="MTNFTFDGAHSSLEFQIKHLMVSKVKGSFDQFDVAVEGDINDFS
                     TLKATATIIPSSINTKNEARDNHLKSGDFFGTDEFDKITFETKSVSESKVVGDLTIKG
                     ITNEETFDVEFNGVSKNPMDGSQVTGVIVTGTINREKYGINFNQALETGGVMLGKDVK
                     FEASAEFSISE"
     gene            2309..3157
                     /locus_tag="O6Y56_001562"
     CDS             2309..3157
                     /locus_tag="O6Y56_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosyl-l-methionine hydroxide
                     adenosyltransferase family protein"
                     /protein_id="HDB5574816.1"
                     /translation="MGNYLVLQSDFGLSDGAVSAMYGVAYTVSDDIRVENLTHDIPPY
                     DIWVASYRLYQTVKYWPKGTVFVSVVDPGVGSDRRSIACLTESGHYIITPDNGSLSHI
                     KHYEGIKKVIEIDEVKSRLPHSEESHTFHGRDVYAYNGARLAAKKIAFESLGQAINVN
                     SIEALEIREATKNEDAVIGSIDILDIRFGSLWTNIPLTFLKSLEIVHGNNLVVTIYHQ
                     DKKVYQNIIKFARSFADVNVGEPLVYVNSLVNIGVAVNQDSFSDLYHIGTGNDWTIHL
                     SKAPSI"
     gene            3186..3740
                     /locus_tag="O6Y56_001563"
     CDS             3186..3740
                     /locus_tag="O6Y56_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF-type riboflavin transporter
                     substrate-binding protein"
                     /protein_id="HDB5574817.1"
                     /translation="MKKQDISVKTVVAIGIGAAVFVILGRFVVIPTGFPNTNIETSYA
                     FLALISAIFGPFAGLMTGLIGHAIKDFTTYGSAWWSWVICSGIIGCLYGWIGLKLNLS
                     SGRFSRKAMIYFNIGQIIANIICWALIAPTLDILIYNEPANKVYTQGVISAVLNIISV
                     GIIGTILLKAYASSQIKKGSLRKE"
     gene            3793..5505
                     /locus_tag="O6Y56_001564"
     CDS             3793..5505
                     /locus_tag="O6Y56_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574818.1"
                     /translation="MTEPIISFKDFSFQYHSQATPTLQNINVDIYPGEKVLVVGASGS
                     GKSTFANCINGLIPFKTKGNVTGELHINNQDATVSCLHERSNVVGTVLQDTDGQFIGL
                     TAAEDMAFLLENNCVEQDDMKKNVSYWAEKVDMIEHLNHRPQDLSGGQKQRVSLGGIL
                     IHRTPILILDEPLANLDPATGHETLRLLNNIHEETKSTMIIVEHRLEESLDDTFDRVL
                     LFKDGKIIANTTPSDLLKSSKLKEAGIREPLYCTALKYAEVDVESIDNLANLREVCMS
                     EHVKFKVKKWIEKTSSNNDNKYKSEPLLELNEVCVQYSDYSNSVLNNVQLNVYRREML
                     SIVGHNGAGKSTLAKAICGFLDITGNIQFCNKGFNQLSISERSEFVGYVMQNPNHMIS
                     EKMIYDEVALGLRARGMKESDIKIRVENVLKICGLYAFRNWPIAALSYGQKKRVTIAS
                     VLVLNPEIIILDEPTAGQDFYHYNEIMSFLIELNRQGKTIIMITHDMHLLSEYSSRTV
                     VLSKGQVVADTTPVLVLNDKKICEIASLRQTSLFEMAEYIGISEPQKLVQLFINHDRK
                     VRRQ"
     gene            5502..6335
                     /locus_tag="O6Y56_001565"
     CDS             5502..6335
                     /locus_tag="O6Y56_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HDB5574819.1"
                     /translation="MNQYNTIGYHPGNSRIHQLNATVKLLFLLVVSISAMVTYDTRYL
                     ILISASSILLFKYAHIEWKKVRFVVKFILFFTILNIIAVYIFDPEYGVKIYNQRTELI
                     NGIGRFTLTSQELFYLFNLILKYISTVPLALIFLFTTNPSHFVASLNQLGVNYKISYA
                     VSLALRYIPDIQETYFNISQAQQARGYDNSKKAKFTSRVKGIKRIVLPLIFSSIERID
                     TISTAMELRQFGQYKRRTWYVKKQLKKDDYVVLCLTLILLMLVVTLFFLNNSRYFNPW
                     H"
     gene            6382..6879
                     /locus_tag="O6Y56_001566"
     CDS             6382..6879
                     /locus_tag="O6Y56_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5574820.1"
                     /translation="MINTERLNLMIPSSSHLIELYNICSHPQANIYTPKGLHNSKLDT
                     QRWIEKWRNHWQQYQFGYFVLVKKIDCSVIGICGYEYRQLKQETVLNLFYKLHPSFEG
                     QGYACEAITAITNFVNYIDQETVKVIRTNKCNQRSINLAERLNFKRDDTMDDIISQGD
                     IVFYK"
     gene            6997..8121
                     /locus_tag="O6Y56_001567"
     CDS             6997..8121
                     /locus_tag="O6Y56_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HDB5574821.1"
                     /translation="MHKKYLLLFFLLLSVALLYSCSKQNEKAQNKSVNPNEYAKHKSK
                     MDEHWETYHGQVYHVFYHPLITDPKVAFTGDTHQAKGNNDWMITVSEFKKSLNELYKN
                     NYIIVNPHDVYDLSSHHVKAKKIKLPKGKKPLIISIDDMNYYSYMRHHGYADRLVLDK
                     NKHVVSETTDSKGHATYSDDNDIVPILNKFVKEHPDFSLNGEKGVVALTGYEGVLGYR
                     TNELTSKDYTKNKKAAEEVVRAMKRDGWSFASHSYGHINFEKTSLDGIKRDTKRWKNE
                     VEPIVGKTDMFVFPHGAQDRHTQAYDYLVDEAEFKFIAGVGPNNFTDISATNVYQDRV
                     AIDGLNLFEFKYKLKPFFNPENVYSKQDRQFFKGNRDYEE"
     gene            8433..9251
                     /locus_tag="O6Y56_001568"
     CDS             8433..9251
                     /locus_tag="O6Y56_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HDB5574822.1"
                     /translation="MNNSEQLIALKESETAFLKYFNKADYELVDFSVVEKLDWKQLNH
                     EDLQQMGERNFWQHEHQIYALRNDFTDQLLRYYSMYPTAATKVAYTGLIIRNNEAAVQ
                     VGLENYAPSLANVQQSLKLFIQFIQQQLRDNVHFVVLGHYQLLDALLDKSLQTPDILS
                     MIEERNLSGLVTYLSTEHPIVQILKENTQQQLNVLEHYIPNDHPALVELKIWERWLHT
                     QGYKDIHLDITAQPPRSYYTGLFIQCHFAENESRVLTGGYYKGSIEGFGLGLTL"
     gene            9269..9883
                     /locus_tag="O6Y56_001569"
     CDS             9269..9883
                     /locus_tag="O6Y56_001569"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDB5574823.1"
                     /translation="MLRIAIAKGRLMDSLINYLDAIEFTTLSETLKNRERQLLLSVDN
                     IECILVKGSDVPIYVEQGIADIGIVGSDILDERHYNVNNLLNMPFGACHFAVAAKPET
                     TKYHKIATSYVHTAEAYFKSKGIDVELIKLNGSVELACVVDMVDGIVDIVQTGTTLEA
                     NGLVEKQHISDINARLITNKAAYFKKSQLIEQFIRSLEVSIANA"
     gene            9876..11126
                     /locus_tag="O6Y56_001570"
     CDS             9876..11126
                     /locus_tag="O6Y56_001570"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDB5574824.1"
                     /translation="MLNAQQFLNQFSLEAPLDESLYPIIRDICQEVKVHGDKALKMYN
                     LTFDHTKTDHLEISHEQIKAAFDTLDEKTKQALQQSYERIKAYQESIKQTNQQLEKSV
                     ECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVL
                     AACYITQVNQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGID
                     QIAGPTEIALIIDDTADLDAIVYDVFAQAEHDELARTYVISEDAQVLKDLESRIAKAL
                     PNVDRYDIVSKSIANQHYLIHASNFDEACHVMNTIAPEHASIQTVNPQPYIEKVKYVG
                     ALFIGHYSPEVIGDYAAGPSHVLPTNRTARFTNGLSVNDFLTRNTVIHLSKDTFDQIA
                     DSAQHIAHVEALYNHQQSILIRQS"
     gene            11142..12155
                     /locus_tag="O6Y56_001571"
     CDS             11142..12155
                     /locus_tag="O6Y56_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate aminotransferase family
                     protein"
                     /protein_id="HDB5574825.1"
                     /translation="MIYIDKNESPVTPLDEKTMTAIISATPYNLYPDAAYEQFKDAYA
                     KFYGLSSEQIIAGNGSDELIQKLMLIMPEGPALTLNPDFFMYQAYAAQVNREIAFVDA
                     GSDLTFDLETILTKIDEVQPSFFIMSNPHNPSGKQFDTAFLTAIADKMKAINGYFVID
                     EAYLDYGMAYDVEMAPHILRMRTLSKAFGIAGLRLGVLISTAGTIKRIQKIEHPYPLN
                     VFTLNIATYIFRHRDETSRFLTMQRQLAEQLKQIFDTHVADKMSVFPSNANFVLTKGS
                     AAQQLGQYVYEQGFKPRFYDEPVMKGYVRYSIATAPQLNQLEEIVKEWSAKYDLSKTT
                     KHS"
     gene            12124..12702
                     /gene="hisB"
                     /locus_tag="O6Y56_001572"
     CDS             12124..12702
                     /gene="hisB"
                     /locus_tag="O6Y56_001572"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HDB5574826.1"
                     /translation="MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFH
                     SGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLAR
                     VVVDISGRPYLSFNATLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHE
                     IEAIFKAFSRALGIALTATDDQRVPSSKGVIE"
     gene            12699..13277
                     /gene="hisH"
                     /locus_tag="O6Y56_001573"
     CDS             12699..13277
                     /gene="hisH"
                     /locus_tag="O6Y56_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDB5574827.1"
                     /translation="MIVIVDYGLGNISNVKRAIEHLGYEVVVSNNPKIIDQAETIILP
                     GVGHFKDAMSEIKRLNLNAILAKNTDKKMIGICLGMQLMYEHSDEGDASGLGFIPGNI
                     SRIQTEYPVPHLGWNNLVSKHPMLNQDVYFVHSYQAPMSENVIAFAQYGTDIPAIVQF
                     NNYIGIQFHPEKSGTYGLQILRQAIQGGFIND"
     gene            13270..13974
                     /locus_tag="O6Y56_001574"
     CDS             13270..13974
                     /locus_tag="O6Y56_001574"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-((5-
                     phosphoribosylamino)methylideneamino)imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDB5574828.1"
                     /translation="MIELWPAIDLIGSTSVRLTEGKYDSEEKMSRSAEESIAYYSQFE
                     SVNRIHIVDLIGAKAQHAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFAAGINYC
                     IVGTKGIQDTDWLKEMAHTFPGRIYLSVDAYGEDIKVNGWEEDTELNLFSFVRQLSDI
                     PLGGIIYTDIAKDGKMSGPNFELTGQLVKETTIPVIASGGIRHQQDIQRLASLNVHAA
                     IIGKAAHQASFWEGLK"
     gene            13971..14729
                     /gene="hisF"
                     /locus_tag="O6Y56_001575"
     CDS             13971..14729
                     /gene="hisF"
                     /locus_tag="O6Y56_001575"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000592599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDB5574829.1"
                     /translation="MIKKRIIPCLDVKDGRVVKGIQFKGLRDIGNPVDLAMYYNEAGA
                     DELVFLDISKTEEGHSLMLEVIEQTASRLFIPLTVGGGIQSLDDITQLLNHGADKVSL
                     NSSALKNPQLIKQASDKFGRQCICIAIDSYYDSERKAHYCCTHGGKKMTNIKVYDWVQ
                     QVEQLGAGELLVTSMGHDGMKQGFDIEHLAKIKSLVNIPIIASGGGGNAQHFVQLFDQ
                     TDVSAGLAASILHDRETTVQSIKEVIRQGGIAVR"
     gene            14726..15358
                     /locus_tag="O6Y56_001576"
     CDS             14726..15358
                     /locus_tag="O6Y56_001576"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000170495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDB5574830.1"
                     /translation="MTNYKIDFSKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGV
                     VCFYSRSKQRLWTKGETSGHTQRVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTE
                     VPFSVQTLAQTVQDSAQSNNEKSYTKYLLTEGIEKITKKYGEEAFEVVIEAIKGDKKA
                     FVSEVADELYHLFVLMHALGVDFSEIEAELARRHHKRNNFKGERQNIEQW"
     gene            16877..18919
                     /gene="lip1"
                     /locus_tag="O6Y56_001577"
     CDS             16877..18919
                     /gene="lip1"
                     /locus_tag="O6Y56_001577"
                     /EC_number="3.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK domain-containing triacylglycerol lipase
                     Lip1"
                     /protein_id="HDB5574831.1"
                     /translation="MKSQNKYSIRKFSVGTSSILIATLLFLSGGQAQAAEKQVNMGNS
                     QEDTVTAQSIGDQQTRENANYQRENGVDEQQHTENLTKNLHNDKTISEENHRKTDDLN
                     KDQLKDDKKSSLNNKNIQRDTTKNNNANPSDVNQGLEQAINDGKQSKVASQQQSKEAD
                     NSQDSNANNNLPSQSRTKEAPPLNKSDQTSQRKIVNKTEIEKVQPQQNNQANAKITKH
                     NFNNEQEVKPQKDEKTLSVSDLKNNQKSPVEPTKDNDKKNGLNLLKSSAVATLPNKGT
                     KELTAKAKGDQTNKVAKQGQYKNQDPIVLVHGFNGFTDDINPSVLAHYWGGNKMNIRQ
                     DLEENGYKAYEASISAFGSNYDRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGI
                     YKDWKPGQKVHLVGHSMGGQTIRQLEELLRNGNREEIEYQKKHGGEISPLFKGNNDNM
                     ISSITTLGTPHNGTHASDLAGNEALVRQIVFDIGKMFGNKNSRVDFGLAQWGLKQKPN
                     ESYIDYVKRVKQSNLWKSKDNGFYDLTREGATDLNRKTSLNPNIVYKTYTGEATHKAL
                     NSDRQKADLNMFFPFVITGNLIGKATEKEWRENDGLVSVISSQHPFNQAYTNATDKIQ
                     KGIWQVTPTKHDWDHVDFVGQDSSDTVRTREELQDFWHHLADDLVKTEKVTDTKQA"
BASE COUNT         6881 a         2743 c         3594 g         5797 t
ORIGIN      
        1 tgttcagggt catcaatcgt cgtatattta taatataaaa gaacttgata gttcataggt
       61 taatctcctt ctaaaaacat gttataagca tgttaatttt taaaataaag cgtcaatacg
      121 catatttgtc tacgtccatc attttaacag agttgtattg tcattcaata tttctagctt
      181 gaaatcagcc actagaccga taaaatagat aaatgaaaac gttatcattt gatttaaatg
      241 ttcccttgtt taaaataaaa atgatagtta aaacgaatga aatgaaagga atgatcatga
      301 tgtcacaaca agatttacct acattatttt atagcgggaa gtctaatagt gctgttccaa
      361 ttatatctga aagtgaatta caaacaatta cagctgaacc atggcttgaa atttcaaaaa
      421 aaggattgca attagaagga ttaaattttg atcgacatgg ccaattattt ttattggatg
      481 tattcgaagg taatattttc aaagtcaatc ctgaaacgaa ggaaattaaa caaccttttg
      541 taagtcataa agcgaatcct gcagcaatca aaatacataa agatggccga ttattcgttt
      601 gttatttagg agattttaaa tctacaggag gcatttttgc agcgacagaa aatggtgaca
      661 acatacaaga tattattgaa gatctttcaa caacatattg tattgatgac atggtatttg
      721 attctaaagg tggattttat tttacagatt ttagaggata ctctaccaac ccactaggag
      781 gcgtttatta tgttgcgccg gactttagaa cagtgacgcc tatcattcaa aatattagcg
      841 tagccaatgg tattgcttta agtacagatg aaaaagtact atgggtaaca gaaacaacag
      901 ccaatcgatt acatcgcatt gcacttgaag atgatggtgt gacgatacaa ccatttggag
      961 ctaccatacc gtactatttt acaggtcatg aaggaccaga ctcatgttgt attgatagag
     1021 atgataattt atatgtggca atgtatggtc aaggccgagt attagtattt aataaaaggg
     1081 gttatccaat aggacaaata ttgataccag gccgagatga agggcatatg ttacgttcta
     1141 cgcatccgca atttatacct ggcacaaatc aactcatcat ttgttccaat gatatagaaa
     1201 tgggcggagg atctatgctt tatacggtta atggctttgc aaaaggtcat caaagttttc
     1261 agtttcaata agacctacct gaatgaaagg tgtcttaata taagtttaaa tcttagcgat
     1321 ttttaattag aagttaaaaa atgccaacta tacctaggga tgatatagtt ggcatttcgt
     1381 atatattaaa acaatgagga ttgtgtaatg agattattct gagattgaaa attcagctga
     1441 tgcttcgaat ttcacatctt tacctagcat tactccacca gtttcaagtg cttggttaaa
     1501 gttaatgcca tatttttctc tattgattgt accagtaaca ataacacctg ttacttgaga
     1561 accatccatt ggatttttac ttactccgtt gaattcaaca tcgaatgttt cttcgttagt
     1621 gatgccttta attgttaaat caccaacaac tttgctttca gatactgatt ttgtttcaaa
     1681 tgtgatttta tcaaattcat cagtaccaaa gaaatcacca gattttaagt ggttatcacg
     1741 tgcttcgttt ttagtgttaa ttgagcttgg aataattgtt gcagtagctt tcaaagtact
     1801 gaagtcatta atatctcctt caacagctac atcaaattga tcaaatgaac ctttcacttt
     1861 agaaaccatt aaatgtttaa tttggaattc taaactactg tgtgcaccat caaaagtaaa
     1921 gttagtcata atataaaacc tccatatttt tatctcttag atatattttt tatacttgat
     1981 atacatacaa taccacctac aaaataaaga tgcaagcatt ttatttcgaa ttcgaatatt
     2041 tttctgtgat gtatttaaag aatgacctat aaaacaccac actattgtta taccctagtc
     2101 aattaattca aacataaaga agtgattaca agtccgtgaa atttagttaa tgagataaat
     2161 ctgactatta ttatcatttt tatagtcact actattgact ttgcatcaag tgactcgtac
     2221 tattttaata taattctgaa aattcaaaat atagaacatt aaatatgtag ataatatttt
     2281 tttgaagttt aaaaaaagga ggcattttat gggaaattat ttggtattgc aatcagattt
     2341 tggacttagt gatggcgctg taagtgcaat gtatggagtt gcatatactg taagtgatga
     2401 tatacgtgtc gaaaacttaa cgcatgatat accaccgtat gacatttggg tagcgtcata
     2461 tcgtttatat caaactgtaa aatactggcc taaaggcaca gtttttgtat cagtggtaga
     2521 cccgggtgta ggtagtgata ggcggagcat tgcttgctta acagaatcgg gtcattacat
     2581 tattacacct gataatggct ctttaagtca tatcaaacat tacgaaggta ttaaaaaagt
     2641 tatcgaaatt gatgaagtga aaagccgatt gcctcattcg gaagaaagtc atacttttca
     2701 tggtagggat gtttatgcat acaatggagc gagattagct gccaaaaaga tagcatttga
     2761 aagcctcggt caggcaatta acgttaatag tattgaagca ttagaaataa gagaagcgac
     2821 aaaaaatgag gatgctgtta taggaagtat tgatatttta gatatcagat ttgggtcatt
     2881 atggacaaat attccattga cattcttaaa atccttggaa attgttcatg gtaataattt
     2941 ggtggtaaca atttatcatc aagataagaa agtctatcaa aatattatta aatttgcgcg
     3001 atcatttgca gatgttaatg tgggtgaacc tcttgtatat gttaactcgc tagtgaatat
     3061 tggtgtagca gttaatcaag actcattttc agatttatat catattggta ctggaaatga
     3121 ttggacaatt catttatcta aagcaccatc gatttaatga attttttatg taaggagtaa
     3181 tgaagatgaa aaaacaagat atttcagtta aaactgttgt tgcaattggt ataggagcag
     3241 cggtctttgt aattttaggg cgttttgttg taataccaac agggtttcct aatacgaata
     3301 tagaaacatc ttatgcattt ttagcattaa tatctgcaat atttggacct tttgctggtt
     3361 taatgactgg attaattggt cacgctatta aagatttcac gacatacggt agtgcctggt
     3421 ggagttgggt tatttgctcg ggaattatag gctgtttata tggatggatt ggcctaaaat
     3481 taaatctttc ttcaggccga ttttctagga aggcgatgat ttattttaat atcggtcaaa
     3541 ttattgcgaa tattatatgc tgggcactta ttgcaccaac attagatatt ttgatttata
     3601 acgaaccagc taacaaggtt tatacacaag gtgttatctc tgcagtatta aatattattt
     3661 cagttggcat tattgggaca atattattaa aagcatatgc ttcatctcaa ataaaaaaag
     3721 gtagtttacg taaagaataa ttattttgtt gaatcagata tgtaaatgaa tgtagaaagg
     3781 taatgatata tcatgactga accaattatc tcgttcaaag actttagttt tcaatatcat
     3841 agtcaagcaa cacctacatt acagaatata aatgttgata tttatccggg agaaaaagta
     3901 ttagtagttg gtgcttcggg tagtggtaaa tcgacttttg caaattgcat aaatggatta
     3961 attccattta aaactaaagg taacgtaact ggggaactac atataaataa tcaagatgca
     4021 actgttagtt gtttacatga aagatctaat gttgttggta cagttttaca agatacagat
     4081 ggacagttca taggcttaac agcagctgaa gatatggcct ttttattgga aaataattgt
     4141 gttgaacaag atgatatgaa gaaaaatgtg agttattggg ctgaaaaagt tgatatgata
     4201 gaacatttaa atcaccgacc gcaagattta tctgggggtc aaaaacaacg cgtttcatta
     4261 ggtggtatat taatccatcg tacccctatt ttaatattgg atgagccact ggccaattta
     4321 gatcctgcga caggacatga aacgctgaga ttgttaaata atattcatga agaaacaaag
     4381 tcaacgatga ttattgtcga acatcgatta gaagaatcat tagatgatac gtttgataga
     4441 gttcttcttt ttaaagatgg aaaaatcatc gctaatacaa cgcctagtga tttgctaaaa
     4501 tcatctaagc ttaaagaagc aggcatacgt gaaccattat actgtacagc gcttaaatat
     4561 gcagaagtag atgttgaatc cattgataat ttagcgaatt tacgtgaagt ttgtatgagt
     4621 gaacatgtta aatttaaagt gaaaaaatgg atagaaaaaa catcttcaaa taatgataat
     4681 aagtacaaat ctgaaccgct attagaatta aatgaggtgt gtgttcaata tagtgactat
     4741 agtaatagtg tacttaataa tgttcaatta aatgtttata gaagagaaat gcttagtata
     4801 gttggtcaca atggtgccgg caaatcaaca cttgctaaag caatttgtgg atttttagat
     4861 ataacaggta atatccaatt ttgtaataag ggatttaatc aattgtcaat tagcgaacga
     4921 tctgaattcg taggttatgt gatgcaaaat ccaaatcata tgatttccga aaaaatgatt
     4981 tacgatgaag tagcattagg gttaagagca cgaggtatga aagaatcaga tataaagata
     5041 cgggtagaga atgtgctcaa aatatgcgga ctttatgcat ttcggaattg gccaattgcc
     5101 gctttaagct atggtcaaaa aaagagggtc actatagcat ctgttttagt cttaaatccg
     5161 gaaataatca tattggatga accgactgct ggtcaagatt tctatcatta taatgagata
     5221 atgtcatttt taattgagct aaacagacag gggaagacga ttattatgat tacgcatgat
     5281 atgcatttat tgtctgagta tagttcaaga acagttgtat tatcaaaagg tcaagtcgtt
     5341 gctgatacca cgccagtatt ggttttaaat gataaaaaaa tctgtgagat tgcatcattg
     5401 agacaaacat cgctatttga aatggccgaa tatataggga ttagtgagcc acagaaatta
     5461 gtacaattat ttattaacca tgataggaag gtgagacgcc aatgaatcaa tataatacta
     5521 taggttatca cccgggaaat agtcgtattc atcaattaaa tgcgactgtt aaacttttat
     5581 tcttattagt tgtttctatt tctgcaatgg tgacttatga cacaagatat ttaattttaa
     5641 ttagtgcttc atctatttta ttgttcaaat atgctcatat tgaatggaaa aaagttcgtt
     5701 ttgttgttaa attcattctg tttttcacaa tattaaatat tattgccgta tacatatttg
     5761 atcctgaata tggtgtgaag atttataatc agcgtacaga gttaatcaat ggtattggtc
     5821 gatttacgct aacatcacag gaattattct atctttttaa tctaatatta aaatatatta
     5881 gtacagttcc tttagcgtta atatttttat tcacaacgaa tccgagtcat tttgttgcaa
     5941 gtttaaatca gctaggtgtg aattataaaa tcagttacgc agtctcacta gcattaaggt
     6001 atattccaga tattcaagaa acatatttta atatttcaca agcgcaacaa gcaagaggat
     6061 atgataattc gaaaaaagcg aaatttacta gccgtgttaa aggtatcaaa cgcattgtgt
     6121 tacctttaat attttctagt atcgaaagaa ttgacactat tagtactgct atggagttaa
     6181 gacaattcgg acagtataaa aggagaacct ggtacgtcaa aaaacaatta aaaaaagatg
     6241 attatgttgt tttgtgtttg acattaatac ttctgatgtt agtagttaca ttattctttt
     6301 taaataatag tcgatatttc aacccgtggc attagtattc atataaatag tctttaaata
     6361 gaaataggag ggagacattt aatgataaat actgaaagat taaatttaat gattccgagt
     6421 tcctcgcatt taattgaact ttataatatt tgtagtcatc cacaagcaaa tatatacact
     6481 cccaaaggtt tacataattc caaattagac acacaacggt ggattgaaaa atggcgaaac
     6541 cattggcaac aatatcaatt tggttacttt gtattggtga aaaaaataga ttgtagtgtt
     6601 attggtattt gtggatatga atatcgacaa ttaaagcaag aaacagtact aaatttattt
     6661 tataaattac atccaagttt tgaaggacaa gggtacgcat gtgaggctat tacagcaatc
     6721 acaaattttg tgaattatat cgatcaagaa acagtaaaag ttatcaggac aaataagtgt
     6781 aaccaacgtt caataaattt agcagaaagg cttaatttca agcgagacga tacaatggac
     6841 gacattatca gtcaaggaga tattgtgttt tataaataaa atactatgac attatctaaa
     6901 aaataaaatt aaaatcccaa cagtttctta aaaagttatg agccgcataa taaaaatgtt
     6961 ataattgtgc ataataaaac atagggagaa tgtttaatgc ataaaaaata tttattgcta
     7021 ttttttctgt tattatcagt tgcattgtta tatagctgtt ccaagcaaaa tgagaaagct
     7081 caaaataaat ctgttaatcc aaatgagtat gcaaagcata aatcgaaaat ggatgaacat
     7141 tgggaaacat atcacggcca agtatatcat gtgttttatc atccattaat tacagaccca
     7201 aaagttgcgt ttacaggaga tacacaccaa gctaagggca acaatgattg gatgattact
     7261 gtaagtgaat ttaaaaaatc attgaacgaa ttatataaaa ataattacat catcgttaat
     7321 ccacatgatg tatacgactt atcatctcat catgtaaaag ccaaaaaaat aaaattgccg
     7381 aaaggtaaaa agccactaat catctcaatt gatgatatga attactatag ttacatgaga
     7441 caccatggtt atgctgaccg cttagtactt gataaaaata agcatgttgt atctgaaacg
     7501 acagactcaa aaggccatgc tacttattct gatgacaatg atatcgtgcc aattttaaat
     7561 aaatttgtaa aagagcatcc agatttttct ttaaatggtg aaaaaggtgt tgttgcttta
     7621 accggttatg agggtgtatt aggttatcgc acgaatgaat taacgagtaa agattataca
     7681 aagaataaaa aggcggctga ggaagttgtt cgcgcaatga aacgggatgg atggtcattt
     7741 gcgagtcatt catatggtca cattaatttt gaaaaaacat ctttagatgg tattaaacgt
     7801 gatactaaaa gatggaaaaa tgaagttgaa ccaattgtag gtaaaacaga tatgtttgta
     7861 tttccacatg gcgcacagga tagacataca caagcgtatg attatttggt agatgaagca
     7921 gagtttaagt ttattgcagg tgtcggtcca aacaatttta cagatatatc agcaacgaac
     7981 gtttaccaag atagggttgc gattgatggt ctaaacttat ttgaatttaa atataaactc
     8041 aaaccatttt ttaatcctga aaatgtatat agtaaacaag atagacaatt ctttaaaggt
     8101 aatcgggatt atgaagaata agttgaaatg aatagagtaa tcctgaaaaa aagataatgt
     8161 attaactcat taggcaagga caatatgtgc aagaagtaca acttcaatat aaaaatcttg
     8221 gttaagcatt tttataggca caaatgtctt gcctttttct tttgaaaaaa tttaaaacca
     8281 atacaccgaa ttttctgaaa aaaaggttgt aatgtattgc taaaaatgat aagttattaa
     8341 gcatattaca ctttagtatg gtagagaagt aaagtgaaca acaaaaatac caagtgattt
     8401 taaatacagt attgaaagta aagggtggtc gagtgaataa ttcagaacaa ttaattgcgt
     8461 taaaagaatc ggaaacagca tttttaaaat attttaataa agcggattat gagttagttg
     8521 attttagtgt ggttgaaaaa ttggactgga aacaattgaa ccatgaggat ttgcagcaga
     8581 tgggtgagcg aaatttttgg caacatgagc atcaaattta tgcacttcga aatgatttta
     8641 cagatcaatt attacgttat tactcaatgt atccaactgc agcaacaaaa gtggcataca
     8701 caggtttaat cattcggaat aatgaagcgg ctgtacaagt tggtttggaa aactatgcac
     8761 catcattagc gaatgtacaa cagagcttaa agctatttat tcagtttatt caacagcagt
     8821 tgagagacaa cgtgcatttt gttgtattgg gacattatca attgcttgat gccttactcg
     8881 ataaatcgtt acaaacacca gacatactat caatgattga ggaacgtaat ttatcgggac
     8941 tggttacata tttgtcgact gaacatccaa ttgtgcaaat cttgaaagag aatacgcaac
     9001 aacaattaaa tgtattggaa cactatattc caaatgacca tccagcactc gttgaattaa
     9061 aaatatggga acgttggtta catacacaag gttacaaaga catccattta gatattactg
     9121 cgcagccacc tagatcctat tacacaggtt tatttattca atgtcacttt gctgaaaatg
     9181 aatctcgagt tttaacaggt ggttattaca aaggaagcat cgaagggttt ggattaggat
     9241 taacacttta agtaagggag tatgcacaat gttaagaatc gccatagcaa aagggcgtct
     9301 aatggatagt ttaattaact atttagatgc aattgaattt acgacattat cagaaacatt
     9361 aaaaaataga gaacgccaat tattattaag tgtagataat atagaatgca ttttagtaaa
     9421 agggagtgac gtgccaatct atgtggaaca aggaattgca gatattggta tcgttggtag
     9481 cgacatttta gatgagcgtc attacaatgt taataatttg ttgaatatgc ctttcggagc
     9541 atgtcatttt gcggttgcag cgaaacccga aacgacaaaa tatcataaaa tcgcaacgag
     9601 ttatgtccat actgccgaag catattttaa atcaaaaggc attgatgtcg aattgattaa
     9661 attgaatggt tctgttgaat tagcttgtgt tgtcgatatg gtagacggaa ttgtcgacat
     9721 cgttcaaaca ggtactactc tagaagcgaa tggactggtt gaaaagcaac atattagtga
     9781 tatcaatgca agattaataa ctaataaagc agcttatttt aaaaaatcac aattaataga
     9841 gcaatttatt cgctctttgg aggtgtctat agccaatgct taatgcacaa caatttttaa
     9901 atcaattttc attagaagca ccattagatg agtcattgta tccaattatt cgcgatattt
     9961 gtcaggaagt taaagttcat ggagataagg ctttgaaaat gtataatcta acattcgatc
    10021 atacgaaaac agatcattta gaaattagtc atgaacaaat taaagcagca tttgacacat
    10081 tagatgaaaa aaccaaacaa gcattacaac aaagttatga aagaattaaa gcatatcaag
    10141 aaagtattaa gcagacgaat caacagttag aaaaatcagt ggagtgttat gaaatatacc
    10201 atccattaga aagtgtgggt atttatgtgc ctggtggcaa agcaagttat ccatcaacgg
    10261 ttctaatgac agcgacttta gcacaagtag cgggtgtaga aaatattgtt gttgtgacac
    10321 cacctcaacc taacggagta tcccaagagg tattagctgc atgttatatt acgcaagtta
    10381 atcaagtgtt tcaagttggt ggtgctcaaa gtattgctgc attgacttat ggaacagaaa
    10441 cgatacctaa agttgataag attgtaggtc caggtaacca atttgttgca tatgccaaaa
    10501 aatatttatt tggacaggta ggtattgatc aaattgcagg accaacagaa atagcactga
    10561 ttattgatga caccgcagat ttagatgcca tcgtatatga tgtatttgcg caagcagaac
    10621 atgatgaatt agcacgtaca tatgtcatta gtgaagatgc gcaagtcctt aaagatttag
    10681 aatcacgtat tgctaaagca ttgcctaatg tggacagata cgacattgtt tctaaaagta
    10741 tcgctaatca acactacctt atccatgcta gtaattttga tgaagcatgc catgtcatga
    10801 atacaatcgc gcctgaacat gcgtcgattc aaacagtaaa tcctcaacca tatattgaaa
    10861 aagtgaaata tgtgggcgca ttgtttattg gacattattc gccagaggtc ataggagatt
    10921 acgctgcagg acctagtcat gtattaccta caaatagaac agctagattt actaatgggt
    10981 tatcggtcaa tgatttctta acacggaaca cggtcatcca tttatcaaaa gatacatttg
    11041 atcaaattgc tgattcagca caacatattg ctcatgttga agcattatac aatcaccaac
    11101 agtccatatt aatacgtcag tcttagggga gtgtaattga aatgatttat attgataaaa
    11161 atgaaagtcc agttacgccg ttggatgaaa aaacaatgac ggctattatt agtgcaacgc
    11221 catataattt atatcctgat gcagcatatg aacaattcaa ggacgcttat gctaagtttt
    11281 acggattatc gtctgaacaa attattgcag gaaatggctc tgatgaattg attcagaagt
    11341 taatgctgat aatgccagaa ggtccggcat taacgctaaa tccagatttt tttatgtatc
    11401 aagcatatgc ggcacaagta aatcgtgaaa ttgcatttgt agatgcagga tcagatttaa
    11461 cgtttgattt ggaaaccatt ttaacgaaaa tcgatgaagt acaaccatca ttttttatta
    11521 tgagtaatcc acataatcct tcaggcaagc aatttgatac ggcattttta acagctattg
    11581 cagataagat gaaagcaata aacggatact ttgtcattga tgaagcatat ttagattatg
    11641 gcatggcata tgacgttgaa atggcaccac acattttaag aatgcgcaca ttatcaaagg
    11701 cgtttggaat tgccggctta agattaggcg tcttaattag tactgcagga acgataaagc
    11761 gtattcaaaa aatagaacat ccctacccat taaatgtatt tacgctgaat attgcgactt
    11821 atatttttag acatagagat gagacaagtc gatttttaac aatgcaacgc caattagctg
    11881 agcagttaaa acaaatattt gatacacatg ttgcagataa aatgtcagta ttcccatcaa
    11941 atgccaattt tgtacttact aaaggttcag cggcgcaaca attaggacaa tacgtatatg
    12001 aacaaggatt taaacctcgc ttttatgatg agccggtgat gaagggctat gtaagatact
    12061 caattgcaac agcaccacag ttaaaccaat tagaagaaat tgttaaagaa tggagcgcaa
    12121 aatatgattt atcaaaaaca acgaaacaca gctgaaacgc aactaaatat ttcaatatct
    12181 gatgatcagt caccatcgca tattaataca ggtgtgggct ttttaaatca tatgttaacc
    12241 ttgtttacgt ttcatagtgg actgtcgtta aacattgagg cacaaggtga tattgacgta
    12301 gatgatcacc acgtaactga agatatcggc attgtcattg gccaattgtt acttgaaatg
    12361 attaaagata aaaagcattt cgttcgttat ggaacgatgt acattccaat ggatgaaaca
    12421 ttagcacgtg tcgttgtgga tataagtggg cgtccatact tatctttcaa tgcaacgtta
    12481 agtaaagaaa aagttggtac gtttgatacg gagttagttg aagaattttt tagagcagtc
    12541 gtaatcaatg caagattaac aacgcatatt gatttgattc gtggtggtaa tacacaccat
    12601 gaaattgaag ctatattcaa agcattttcc cgtgcattag gcatagcgct aactgcaact
    12661 gatgatcagc gtgtgccatc atcgaaaggt gtgattgaat gattgtcatc gttgattatg
    12721 gattagggaa tattagtaat gtaaaacgcg ctattgaaca tttggggtat gaggtggttg
    12781 tctcaaataa cccaaaaata atcgaccaag cagaaacaat catattgccc ggtgtcggcc
    12841 attttaaaga tgcgatgtca gagataaaac gattaaatct caatgcaata ttggctaaga
    12901 atactgataa gaagatgatt ggtatttgtt taggcatgca attaatgtat gagcatagtg
    12961 atgaaggcga tgcatctgga ttagggttta tcccaggaaa tatttcgcgt atccaaacag
    13021 aatacccagt gccgcactta ggttggaata atttagtgag taagcatcct atgttaaatc
    13081 aagatgttta cttcgtacat tcttaccaag cgccgatgtc agaaaatgtc attgcatttg
    13141 cgcagtatgg tactgatatt ccagcaattg ttcaatttaa caattatatt ggtattcaat
    13201 tccatcctga aaaaagcggt acatatgggt tacaaatttt gcgtcaggca atacaagggg
    13261 gatttataaa tgattgaatt atggccagcg attgatttga ttgggtcaac aagtgtgagg
    13321 ttaacagagg ggaaatatga tagtgaagaa aaaatgtcgc gttcggctga agaaagtatt
    13381 gcttactata gtcaatttga aagtgtgaat cgtattcata tcgtcgactt gataggtgct
    13441 aaggcacagc atgcccgaga gtttgattat attaagtcat tgaggagatt aacaaccaaa
    13501 gatattgaag taggtggtgg cattcgtacg aagtcacaaa tcatggacta ctttgccgca
    13561 ggaattaatt attgcatagt tggaacgaaa ggcattcaag atactgattg gcttaaagag
    13621 atggcacata catttccagg tcgtatttat ctgtcagttg atgcttatgg agaagatatt
    13681 aaagtgaacg gatgggaaga ggacacagag ttaaatttat ttagttttgt gagacagtta
    13741 tcggatatac ctcttggagg cattatatat actgatattg ctaaagatgg caaaatgtcc
    13801 ggtcctaact ttgaattaac tggtcaatta gtaaaggaaa cgacgattcc tgtcatcgcg
    13861 tctggtggta ttagacatca gcaagatatt caacgattag cgtcgctaaa tgttcacgct
    13921 gctattatag gaaaggccgc acatcaagca tcattttggg aggggcttaa atgattaaaa
    13981 aacgtatcat tccatgttta gatgtcaaag atggtcgtgt cgttaaaggg attcaattta
    14041 aaggattaag ggatattggg aatcctgttg atttagcaat gtattacaat gaagcgggtg
    14101 ctgatgagtt agtattttta gacatctcta agacggaaga gggtcatagc ttaatgttag
    14161 aagtgattga acagacagcg tcacgcttgt ttatccctct tactgtagga ggtgggattc
    14221 aaagcctcga tgatattacc caattgttaa atcatggtgc agataaagta tcattaaatt
    14281 caagtgcttt aaaaaatcca cagctcatta aacaagcgag tgataaattc ggtagacaat
    14341 gcatctgtat agcaattgat agctattatg attctgaaag aaaagcacat tattgttgta
    14401 cgcatggtgg taaaaagatg acaaatatta aagtatatga ctgggtacag caagtagaac
    14461 agttaggcgc aggtgagctc ctcgtaacga gtatgggaca tgatggtatg aagcaaggct
    14521 ttgatattga gcatcttgca aaaataaaat ccctcgtaaa tattccaata attgcttctg
    14581 gtggtggtgg caatgcacaa cactttgtac aattatttga tcagacggat gtttctgcag
    14641 gtttagctgc aagtatatta catgatcgag aaacgacggt tcaatctatt aaagaagtga
    14701 tacggcaagg gggtatagca gtaagatgac caattacaaa attgatttta gcaaaggttt
    14761 agtgccagca attttacaag ataatcaaac aaaacaagta ttgatgttgg gttatatgaa
    14821 tcaagaagct tttgataaaa cgatagaaga tggtgtggta tgtttctatt cgcggtcgaa
    14881 acaacggcta tggacaaaag gtgaaacatc tggtcatacg caacgtgtta aagatattca
    14941 tgtagattgc gacaatgaca ctattttaat tgatgtcata cccaatggac caacatgcca
    15001 tacaggcagt caaagttgtt tcaacacaga agttccattt tcagtgcaaa cattagcgca
    15061 gacagttcaa gatagtgccc aatccaataa tgaaaagtca tatacaaaat atttattaac
    15121 agaaggtata gaaaagatta caaaaaaata tggtgaagaa gcttttgaag tcgtaattga
    15181 agcaattaaa ggtgataaaa aagcatttgt aagtgaagta gcagatgaac tttatcattt
    15241 atttgtcttg atgcatgcgc taggcgtcga tttttcagaa attgaggcag aattagcgcg
    15301 tagacatcat aagcgcaata actttaaagg cgaacgacaa aatatcgaac agtggtaaag
    15361 caagtatgga ctgagatata gagaaaagga tcatggctta tacacttaca aatattgtgg
    15421 aaaacgtgac attttcaatt ttaaaatacg aaccaacata ttttaactat gaatgctgtg
    15481 atggtactaa agttgcgaac tcgttataga taagtagtgg ataatcacaa cacgaaatca
    15541 aaaatgatta tgaaaagtaa attgagcaac tcaggaatag atgtcactgt taaagatgtc
    15601 gaaaagtata tgaatcgata taattgaagt tatgaaggga aaaaatggcg aaaaagctaa
    15661 agagaattta gtagccttta ataaagaagt agaaaaacaa cagaaaaaat actataagca
    15721 atagagatac ttgtgatgct ctaactgtaa ctggttttgc acatacaact gctacaacgg
    15781 gagcgatggc tgctctaggt gttagtggtc ctattggctg gggtgtcggt actggaatgg
    15841 cagcacttta tgctggcgga tctattgctt gtaataatat gtaggtgaaa aatatgaaaa
    15901 aattattcaa tgaatatttt tttactacga gtcaagcaac tgcattaatt attttttcgt
    15961 taccaatgac agacttattc actaagaacc ttttattata tatgcttcta tttattgtaa
    16021 taattggaag tacacattta ttgagagaga gttaagtaaa aaatattcat tacaggaaaa
    16081 agctaaaaag ttatgtttgt cgttactacc tattaatatc atagttgtct ttatattctt
    16141 tgtatttata ctgtgaataa aaatatatct agcctgaaat agaaatgtca tagcctattt
    16201 aaaagacaat ctccattaga actaagatgt gcatcccgaa agttggacta aaaaactaac
    16261 tttatggggt gtatttttat gctaatcatc ataaattcga gattaagtta aaggtagttc
    16321 aagagtaatt aaacaataaa ttaaaaataa cacgacatat actttgagaa gagaacatgc
    16381 aatggtatat atcaatcaaa gttacgagca taatggttta tcctgataca atcattgtag
    16441 aagaaatgat atttttaggt ttaaaatacg acaccagcaa acattataac tgtgatagct
    16501 cataaatccc cccatacagc taatctaaaa aataatacat cattggaatc aagacccaag
    16561 catgtaaata ttaaaaatca caaaagatat atgtaaaaaa gttacaattt gcataattaa
    16621 attgtgtcta attattgact aattaaattt tgccaaatat aatattaatt aataatttga
    16681 aatgattagc gtatacactt taaattctct ttggagaata tattttttaa atacaaatgt
    16741 aaacgctttc tcttcaaatt aaacaataga aaggatggtc attatgagtg cttggttaag
    16801 taaattattt gagtttattc ctcgaataat tatcaatttg tttatctaaa ataaaaaaat
    16861 agaggtgctg acaatgatga aaagtcaaaa taagtatagt attcgtaaat ttagtgtagg
    16921 tacatcttcc attttaatag ctacattact atttttaagt ggtggacaag cacaagcagc
    16981 tgagaagcaa gtgaatatgg gaaattcaca ggaggataca gttacagcac aatctattgg
    17041 ggatcaacaa actagggaaa atgctaatta tcaacgtgaa aacggtgttg acgaacagca
    17101 acatactgaa aatttaacta agaacttgca taatgataaa acaatatcag aagaaaatca
    17161 tcgtaaaaca gatgatttga ataaagatca actaaaggat gataaaaaat catcgcttaa
    17221 taataaaaat attcaacgtg atacaacaaa aaataacaat gctaatccta gcgatgtaaa
    17281 tcaagggtta gaacaggcta ttaatgatgg caaacaaagt aaagtggcgt cacagcaaca
    17341 gtcaaaagag gcagataata gtcaagattc aaacgctaat aacaatctac cttcacaaag
    17401 tcgaacaaag gaagcaccac cattaaataa gtcagatcaa acaagccaac gaaaaattgt
    17461 taataagaca gaaatagaaa aagtacaacc acaacaaaat aatcaagcga atgctaaaat
    17521 tactaaacac aattttaaca atgaacaaga agtgaaacct caaaaagacg aaaaaacact
    17581 atcagtttca gatttaaaaa acaatcaaaa atcaccagta gaaccaacaa aggacaatga
    17641 caagaaaaat ggattaaatt tattaaaaag tagtgcagta gcaacgttac caaacaaagg
    17701 gacaaaggaa cttactgcaa aagcgaaagg tgatcaaacg aataaagttg ccaaacaagg
    17761 gcagtataaa aatcaagatc ctatcgtttt agtgcatggt ttcaatgggt ttacagatga
    17821 tattaatcct tcagtgttag ctcattattg gggcggtaat aaaatgaaca ttcgccaaga
    17881 tttagaagaa aatggttaca aagcttatga agcaagtata agtgcttttg gaagtaacta
    17941 tgaccgcgca gttgaacttt attattatat caaaggcggt cgtgtagatt atggtgcagc
    18001 acatgcagca aaatatggac atgaacgtta tggaaaaaca tacgaaggaa tttacaaaga
    18061 ctggaaacca ggacagaagg tacacctagt tggacatagt atgggcggtc aaacgatacg
    18121 tcaactagaa gaattactgc gtaatggtaa tcgtgaagaa atagagtatc aaaagaaaca
    18181 tggtggtgaa atttctccac tattcaaagg taataatgac aatatgattt catcaattac
    18241 tactttagga acaccacata atggtacaca cgcatcagat ttagctggta atgaagcttt
    18301 agtgagacaa atcgtatttg atatcggtaa aatgtttggt aataaaaatt caagagtaga
    18361 cttcgggttg gctcaatggg gtctaaaaca gaagccaaat gaatcatata ttgattatgt
    18421 caaacgcgtt aaacaatcta atttatggaa atcaaaagat aatggatttt acgatctgac
    18481 gcgtgagggt gcaacagatt taaatcgtaa aacgtcgttg aaccctaaca ttgtgtataa
    18541 aacatacact ggtgaagcaa cgcacaaagc attaaatagc gatagacaaa aagcagactt
    18601 aaatatgttt ttcccatttg tgattactgg taacttaatc ggtaaagcta ctgaaaaaga
    18661 atggcgagaa aacgatggtt tagtatccgt tatttcttct caacatccat ttaatcaagc
    18721 ttatacaaat gcgacggata aaattcaaaa aggcatttgg caagtaacgc ctacaaaaca
    18781 tgattgggat catgttgact ttgtcggaca agatagttct gatacagtgc gcacaagaga
    18841 agaattacaa gatttttggc atcatttagc agacgattta gtgaaaactg aaaaggtgac
    18901 tgatactaag caagcataat ttataaagta aagggaggta tatacaatga cagcagactt
    18961 ctttcaatta atcggatcat tatttagaat tctaaaagaa ttattcaagt aatat
//
LOCUS       DALMNS010000056        18707 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.056, whole genome shotgun sequence.
ACCESSION   DALMNS010000056 DALMNS010000000
VERSION     DALMNS010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 18707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18707
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.056"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..721)
                     /gene="csbB"
                     /locus_tag="O6Y56_001578"
     CDS             complement(<1..721)
                     /gene="csbB"
                     /locus_tag="O6Y56_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoteichoic acid-specific glycosylation protein
                     CsbB"
                     /protein_id="HDB5574832.1"
                     /translation="MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFID
                     DGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQH
                     PPEYIPKMIEGFMEGYDQVIAKRDRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGD
                     FRLLSQRAVKSIASLEEYNRFSKGLFEWIGYNTKVFTYQNVARQKGESKWSFKKLFNY
                     GIDGLISFNSKPLRMMIYLGLF"
     gene            complement(853..1692)
                     /locus_tag="O6Y56_001579"
     CDS             complement(853..1692)
                     /locus_tag="O6Y56_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDB5574833.1"
                     /translation="MLNEIQILNNGYPMPSVGLGVYKISDEDMTKVVNAAIDAGYRAF
                     DTAYFYDNEASLGRALKDNGVDREDLFITTKLWNDYQGYEKTFEYFNKSIENLQTDYL
                     DLFLIHWPCEADGLFLETYKAMEELYEQGKIKAIGVCNFNVHHLEKLMAQSSIKPMVN
                     QIEVHPYFNQQELQEFCDRHDIKVTAWMPLMRNRGLLDDPVIVKIAEKYHKTPAQVVL
                     RWHLAHNRIIIPKSQTPKRIQENIDILDFNLELTEVAEIDALNRNARQGKNPDDVKIG
                     DLK"
     gene            complement(1914..3263)
                     /locus_tag="O6Y56_001580"
     CDS             complement(1914..3263)
                     /locus_tag="O6Y56_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDB5574834.1"
                     /translation="METSTIISLIIFILLIALTTVFVGSEFALVKIRATRIEQLADEG
                     NKPAKIVKKMIANLDYYLSACQLGITVTSLGLGWLGEPTFEKLLHPIFEAINLPTALT
                     TTISFAVSFIIVTYLHVVLGELAPKSIAIQHTEKLALVYARPLFYFGNIMKPLIWLMN
                     GSARVIIRMFGVNPDAQTDAMSEEEIKIIINNSYNGGEINQTELAYMQNIFSFDERHA
                     KDIMVPRTQMITLNEPFNVDELLETIKEHQFTRYPITDDGDKDHIKGFINVKEFLTEY
                     ASGKTIKIANYIHELPMISETTRISDALIRMQREHVHMSLIIDEYGGTAGILTMEDIL
                     EEIVGEIRDEFDDDEVNDIVKIDNKTFQVNGRVLLDDLTEEFGIEFDDSEDIDTIGGW
                     LQSRNTNLQKDDYVDTTYDRWVVSEIDNHQIIWVMLNYEFNEARPTIGQSDEDEKSE"
     gene            complement(3484..4665)
                     /gene="nagA"
                     /locus_tag="O6Y56_001581"
     CDS             complement(3484..4665)
                     /gene="nagA"
                     /locus_tag="O6Y56_001581"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HDB5574835.1"
                     /translation="MSELIIYNGKVYTEDGKIDNGYIHVKDGQIVAIGEVNDKAAIDN
                     DTTNKIQVIDAKGHHVVPGFIDIHIHGGYGQDAMDGSYDGLKYLSENLLSEGTTSYLA
                     TTMTQSTDKIDKALINIAKYEVEQDVHNAAEIVGIHLEGPFISENKVGAQHPQYVVRP
                     FIDKIKHFQETANGLIKIMTFAPEVEGAKEALETYKDDIIFSIGHTVATYEEAVEAVE
                     RGAKHVTHLYNAATPFQHREPGVFGAAWLNDALHTEMIVDGTHSHPASVAIAYRMKGN
                     KRFYLITDAMRAKGMPEGEYDLGGQKVTVQSQQARLANGALAGSILKMNHGLRNLISF
                     TGDTLDHLWRVTSLNQAIALGIDDRKGSIKVNKDADLVILDDDMNVKSTIKQGKVHTF
                     S"
     gene            complement(4973..6943)
                     /locus_tag="O6Y56_001582"
     CDS             complement(4973..6943)
                     /locus_tag="O6Y56_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDB5574836.1"
                     /translation="MRVTELLTKDTIAMDLMANDKNGVIDELVNQLDKAGKLSDVASF
                     KEAIHNRESQSTTGIGEGIAIPHAKVAAVKSPAIAFGKSKEGVDYQSLDMQPAHLFFM
                     IAAPEGGAQTHLDALAKLSGILMDENVREKLLHASSPEEVLAIIDHADDEATKEEEAE
                     AEAEAQQVAAVEANQDTNGSNEPYVLAVTACPTGIAHTYMARDALKKQADKMGIKIKV
                     ETNGSSGIKNHLTEQDIKNATGIIVAADVHVETDRFDGKNVVEVPVADGIKRPEELIN
                     KALDTSRKPFVARDGQRKGNSNDSQEKLSPGKAFYKHLMNGVSNMLPLVISGGILMAI
                     VFLFGANSFNPKSSEYNAFAEQLWNIGSKSAFALIIPILSGFIARSIADKPGFASGLV
                     GGMLAISGGSGFIGGIIAGFLAGYLTQGVKAMTRKLPQALEGLKPTLIYPLLTVTATG
                     LLMIYVFNPPASWLNHLLLDGLNNLSGSNIVLLGLVIGAMMAIDMGGPFNKAAYVFAT
                     GALIEGNAAPITAAMIGGMIPPLAIATAMLIFRRKFTKEQRGSIIPNYVMGMSFITEG
                     AIPFAAADPLRVIPSMMIGSGIGGAIALGLGSRITAPHGGIIVIVGTDGAHLLQTLIA
                     LLVGTLVSALIYGLIKPKLTETEIEASKSMDE"
     gene            complement(6949..7869)
                     /gene="pfkB"
                     /locus_tag="O6Y56_001583"
     CDS             complement(6949..7869)
                     /gene="pfkB"
                     /locus_tag="O6Y56_001583"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HDB5574837.1"
                     /translation="MIYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSR
                     VLKTLDVESTALGFAGGFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKLKTGQETEIN
                     APGPHITSTQFEQLLQQIKNTTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVV
                     DAEKELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSL
                     GGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLTIEKAFQQAVACG
                     TATAFDEDLATRDAIEKIKSQVTISVLDGE"
     gene            complement(7866..8630)
                     /locus_tag="O6Y56_001584"
     CDS             complement(7866..8630)
                     /locus_tag="O6Y56_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDB5574838.1"
                     /translation="MMIITEKRHELILEELSHKDFLTLQELIDRTGCSASTIRRDLSK
                     LQQLGKLQRVHGGAMLKENRMVEANLTEKLATNLDEKKMIAKIAANQINDNECLFIDA
                     GSSTLELIKYIQAKDIIVVTNGLTHVEALLKKGIKTIMLGGQVKENTLATIGSSAMEI
                     LRRYCFDKAFIGMNGLDIELGLTTPDEQEALVKQTAMSLANQSFVLIDHSKFNKVYFA
                     RVPLLESTTIITSEKALNQESLKEYQQKYHFIGGTL"
     gene            complement(8879..9361)
                     /gene="ybaK"
                     /locus_tag="O6Y56_001585"
     CDS             complement(8879..9361)
                     /gene="ybaK"
                     /locus_tag="O6Y56_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HDB5574839.1"
                     /translation="MAKNKKTNAMRMLDRAKIKYEVHSFEVPEEHLSGQEVAELIQAN
                     VKTVFKTLVLENTKHEHFVFVIPVSETLDMKKAAALVGEKKLQLMPLDNLKNVTGYIR
                     GGCSPVGMKTLFPTVVDKSCENYSHISVSGGLRTMQITIAVEDLITITKGKIGAVIHE
                     "
     gene            complement(9535..9987)
                     /locus_tag="O6Y56_001586"
     CDS             complement(9535..9987)
                     /locus_tag="O6Y56_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574840.1"
                     /translation="MTVKNLFLGFVAVILTVCLIGLLILATNEDALAKVHKTINTLNA
                     INVSTEDTYKKKMDILNIHTAKASEVNENVKKQNHFKHRVNANKSNSFNEQECQVIAD
                     RYADKHINDNYALERISKTNHGYNYVYSNDNSTSKQHVSISNKGIITK"
     gene            complement(10280..11446)
                     /gene="norA"
                     /locus_tag="O6Y56_001587"
     CDS             complement(10280..11446)
                     /gene="norA"
                     /locus_tag="O6Y56_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter NorA"
                     /protein_id="HDB5574841.1"
                     /translation="MNKQILVLYFNIFLIFLGIGLVIPVLPVYLKDLGLTGSDLGLLV
                     AAFALSQMIISPFGGTLADKLGKKLIICIGLILFSVSEFMFAVGHNFSVLMLSRVIGG
                     MSAGMVMPGVTGLIADVSPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVSHRMPFY
                     FAGALGVLAFIMSIVLIHDPKKVSTNGFQKLEPQLLTKINWKVFITPAILTLVLAFGL
                     SAFETLYSLYTADKVNYSPKDISIAITGGGIFGALFQIYFFDKFMKYFSELTFIAWSL
                     LYSVVVLILLVFANGYWSIMLISFVVFIGFDMIRPAITNYFSNIAGERQGFAGGLNST
                     FTSMGNFIGPLIAGALFDVHIEAPIYMAIGVSLAGVVIVLIEKQHRAKLKEQNM"
     gene            11656..12078
                     /locus_tag="O6Y56_001588"
     CDS             11656..12078
                     /locus_tag="O6Y56_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDB5574842.1"
                     /translation="MKLQKSNHTILLVLEKGEDIVECITNFADDQDLTFTSVSGIGAC
                     DDVVLKFFNLTTKQYEEKHITEPLELTSLLGNISRLDNGHFAHLHATFGTQSYQTYSG
                     HLSKAIVSATAEIVLTVTDLDIQRSFNDAVGLNLLDPQ"
     gene            12265..12882
                     /locus_tag="O6Y56_001589"
     CDS             12265..12882
                     /locus_tag="O6Y56_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1361 domain-containing protein"
                     /protein_id="HDB5574843.1"
                     /translation="MNSRYIARIYFLVLFIASLFENKIYQFMTLNLFLAYIPFELSLL
                     LRLFKPNKKYEWPLFVIYSFIFVLLLPNTFYMVTDLIHLNQFQFNFYAGLNLFEWKYF
                     TYLLLGVFLAIYVMILIYFEILTLTSHPWLNRIIVVILMFLNGFGIYIGRFLRLHSVY
                     FFNEPIRVLNHILKSLTIDTAIFVCFMVMMQAAILLFGKGVRLKK"
     gene            12879..13163
                     /locus_tag="O6Y56_001590"
     CDS             12879..13163
                     /locus_tag="O6Y56_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000154460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574844.1"
                     /translation="MTLDITVFMISIIVLQMIIGHLWHDIGLSYIRSILLMLFPLGIG
                     VFVQQMIYFERQYPKWDVPQHIKIRLKYIYIITFLEYVLLYFTMFTDIFR"
     gene            complement(13235..14608)
                     /locus_tag="O6Y56_001591"
     CDS             complement(13235..14608)
                     /locus_tag="O6Y56_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HDB5574845.1"
                     /translation="MAIAVLLNRMFRIEHNPLFEYIYQQKEDIDACYFIIPEEDMSSA
                     SDLKAQFYRGTLQRFYQSLHAEKLTPYVMSYDDIISFCKENNISEVVIAGDIMSYHLE
                     EYDILHQRSLFNDARIAVTLIRGNHYFKASKTMNQQGEPYKVFTSFYKKWRPYLRHRD
                     VYHYDLKSFEDFVIASPDDLVFDDIAFGSSQIIEQNKWQHFLDQDIQNYESGRDYLPE
                     VLTSQLSVALAYGLLDIIEIFNDLLSRYEEDEANYEAFIRELIFREFYYVLMTQYPET
                     SYQAFKPKYRQIKWSQNEADFNAWCEGQTGFPIIDAAIMELTQTGFMHNRMRMVVSQF
                     LTKDLFIDWTWGEDFFRKYLIDYDAASNIHGWQWSASTGTDAVPYFRMFNPIRQSERF
                     DVKALYIKTYIPIFNQIDAKYLHDTHRNESELFKQGIELGRHYPRQMVDHQEKRSQVL
                     ATFKALD"
     gene            complement(14694..16247)
                     /locus_tag="O6Y56_001592"
     CDS             complement(14694..16247)
                     /locus_tag="O6Y56_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HDB5574846.1"
                     /translation="MSEEKKVVKHERQKNEKTKKQYKPFWIVMSFIILIVVLLLPAPS
                     SLPIMAKAVLAILAFAVIMWVTEAVSYPVSATLIIGLMILLLGFSPVQNLGEKLGNPK
                     SGSAVLTGSDLLGTNHALSLAFSGFATSAVALVAAALFLAAAMQETNLHKRLALIVLS
                     IVGNKTRNIVIGAIIVSIVLAFFVPSATARAGAVVPILLGMIAAFKVSKDSKLASLLI
                     ITSVQAVSIWNIGIKTAAAQNIVAINFINHQLGFDVSWGEWFLYAAPWSIVMSIALYF
                     IMIKVMPPEINTIEGGKDLIKEELHKLGPVSAREWRLIVISMLLLLFWSTEKVLHPID
                     SASITIIALGVMLMPKLGVMTWKHVENKIPWGTIIVFGVGISLGNVLLKTGAAQWLSD
                     QTFGVLGLKHLPIIATIALITLFNILIHLGFASATSLSSALIPVFISLTSTLHLGDQS
                     IGFVLIQQFVISFGFLLPVSAPQNMLAYGTGTFTVKDFLKAGIPLTIVGYILVIVFSM
                     TYWKWLGLL"
     gene            complement(16530..16817)
                     /locus_tag="O6Y56_001593"
     CDS             complement(16530..16817)
                     /locus_tag="O6Y56_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574847.1"
                     /translation="MTNEDKRFEQLRFERKFIVIPYVIYAVIVLLLNIFYSDLKITMT
                     LFGLFFAYNVVILFIAFIKHYKRTLLLSLILTVLSGAAFFGIIYVYGINHF"
     gene            complement(16852..17760)
                     /locus_tag="O6Y56_001594"
     CDS             complement(16852..17760)
                     /locus_tag="O6Y56_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase family oxidoreductase"
                     /protein_id="HDB5574848.1"
                     /translation="MEQIMINHYVHFSRLVQGFWRANEWKMTAKELNYFINELVERGI
                     TTMDHADIYGDYQCETLFGNALDLSPELRNKIQIVTKCGIILPSKQFDFTNGHRYDLS
                     SKHIVKSVEQSLINLNVDYLDSLLIHRPSPLMDPEQVADALTKLVKQGKLKSFGVSNF
                     NHSQYQLLNQYIMKERLHISINQLELSPYHVDSLQDGTMDSMYQNHVQIMAWSPFAGG
                     KIFDKEDIKAQRIMKVIQSIADKYGVSDTAVMIAWLVKIPHRIMPILGTSQLKRIDQA
                     IEGLQLNLDDQSWFDIYTAIIGQDIP"
     gene            complement(17863..>18707)
                     /locus_tag="O6Y56_001595"
     CDS             complement(17863..>18707)
                     /locus_tag="O6Y56_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HDB5574849.1"
                     /translation="YISELLKNDEKIKIIMNEFGTFDIDSNSISNEIEVHSLINGCVC
                     CDLKQELVYELKAIALKGDVNHVIIEATGIAHPLELLVACQDPQIVNFFEKPIIYGVL
                     DATRFLERHQYTENTVSLMENQLKLSDMIIINKIDLVTDDSLKKIDKQLSMICASIPT
                     YKTTYGQVSLEELDLLGKDREISSHHHHHHGIKSMTYTFTGPIDRQLFYQFIMKLPES
                     VLRLKGYVSFRDQPNAIYEFQYAYGLPDYGIIGMQLPLTIVIIGETLDTNHIRNQLDM
                     LQFT"
BASE COUNT         6101 a         3506 c         2541 g         6559 t
ORIGIN      
        1 taaataatcc aagatatatc atcatcctca aaggtttact attaaaggaa atcaatccat
       61 caataccata attaaataac tttttaaagg accacttaga ttctcctttt tgtctcgcaa
      121 cattttgata cgtaaacact ttagtattat atcctatcca ttcaaataac ccttttgaaa
      181 atcgattata ttcttcaagt gatgcaatgg atttaacagc tctttggctt aaaagtctaa
      241 aatcaccaac accatcatca aattgtactt cttctacaaa gcaattaact aacttatagt
      301 acaaatggct taatgttttg cgactaaaat tttcaccact tctatcacgc tttgcaatca
      361 cttgatcata gccttccata aaaccttcaa tcattttcgg aatatattca ggtggatgtt
      421 gcaaatcaca atctatcatg atgactgcat caaattcagt actatgctgg taacctgcaa
      481 tcatagctgc ttcttttcca aaatttctac taaaagaaat aaagctgaca tgcctatcta
      541 ttgtggcaag atgttgcatt tcatctatag tggtatccgt actaccatca tctatgaaaa
      601 gcatattata atcatagcct ttcacactac tatcttgtga aagtatttca gttaattgtt
      661 gatgtgtttg tgtaatgact tccccttcat taaaacaagg aatgacgact ctaattttca
      721 tctatgtcca tcctttttat ttaaaagatt ttgaatgtac ctgagtattg ttttatcaaa
      781 tagtaaaaac caactcattt attttaatgt acacattaaa aggcattcat aaacgtaaaa
      841 tttaacatcc agttatttta aatccccaat tttcacatca tctggatttt taccttgtct
      901 tgcatttcta tttaaagcat caatttcagc tacttctgtt aattctaaat taaaatctaa
      961 aatatctata ttttcttgaa tgcgtttagg tgtctgagat tttggaataa taattctatt
     1021 gtgtgctaaa tgccaacgca atacaacttg tgctggtgtt ttatgatatt tttcagcaat
     1081 tttaacaatg acagggtcgt ctagtagtcc tctatttctc atcaaaggca tccatgcagt
     1141 cactttaata tcgtgacgat cacaaaattc ttgtaattct tgttggttaa aatatggatg
     1201 tacctcaatt tgattcacca ttggtttgat acttgattga gccattaatt tttctagatg
     1261 atgaacatta aaattacata cacctattgc ttttatctta ccttgctcgt aaagttcttc
     1321 catagcttta tacgtttcta aaaatagacc atctgcttca caaggccaat gtattagaaa
     1381 taaatcgaga taatcagttt gtaaattttc aatcgatttg ttgaaatatt cgaatgtttt
     1441 ctcataacct tgatagtcat tccataactt cgttgttata aacaaatctt ctctatcgac
     1501 gccattatcc tttaatgctc gccctagtga agcctcatta tcataaaagt atgctgtatc
     1561 aaacgctcta tagcctgcgt caattgcagc atttacaact ttagtcatat cttcgtcaga
     1621 gattttataa acacctaacc caactgaagg catcgggtat ccattattta atatttgtat
     1681 ctcattcaac atctttatat ctctccaatc tatgtatctt ttatatcttt acattaccct
     1741 aaatttttca acaaactcaa ttaatacgaa ttatcgcttt caataaaaaa cattcattaa
     1801 atcattaaag atattgagtt ccaatactat tatcactttt cattaatttt agtcaaaaaa
     1861 ataaccaacc aaaaatgaat taaatcattc ttagttggtt tatatattaa tatctattct
     1921 gatttttcat cttcatcaga ctgtccgata gtaggtctcg cttcattaaa ttcatagttt
     1981 aacatcaccc aaataatttg gtggttatcg atttctgaaa caacccagcg atcataagtt
     2041 gtatccacgt aatcatcttt ttgtaagttg gtattacgag attgtaacca tccacctatc
     2101 gtatcaatat cctcagagtc atcaaattct ataccgaact cttcagttaa atcatccaat
     2161 agtactctac catttacttg gaatgtctta ttatcaattt taacgatatc attcacttca
     2221 tcatcatcaa attcatcacg aatttcccca acgatttctt ctaaaatatc ttccatcgtt
     2281 aaaatacctg ccgttccacc atattcatct ataataagac tcatatgaac atgttcacgt
     2341 tgcattctaa ttaatgcatc acttatacgt gttgtctctg aaatcattgg taactcatgt
     2401 atatagtttg ctattttaat cgtttttcca gaagcatatt cagttaaaaa ttctttgacg
     2461 ttaataaatc ctttaatgtg gtctttatca ccatcatcag taattggata acgcgtaaat
     2521 tgatgttctt ttattgtttc tagtaattcg tctacattaa aaggttcatt tagtgtaatc
     2581 atttgagttc taggtaccat tatatctttt gcatgtcttt catcgaatga aaagatattt
     2641 tgcatatatg ccaattcagt ttggttgatt tctccaccat tataactatt gttaataata
     2701 attttgattt cttcttctga cattgcatcg gtttgggcat caggatttac accaaacatt
     2761 ctaataataa cacgtgcaga accattcatc agccaaatca atggtttcat aatgttaccg
     2821 aaatagaaca atggtcttgc atatactaaa gcaagctttt cagtatgttg aatcgctata
     2881 gatttaggcg ctaattcacc aagtactaca tgcaaatacg taacgattat aaatgatact
     2941 gcaaacgaaa tcgtcgttgt taatgcagtt ggtaaattga ttgcttcaaa tatcgggtgt
     3001 aatagctttt caaacgttgg ttcaccaagc caacctaacc ctaaagatgt tactgttata
     3061 cctaactgac aagcagaaag ataataatct agattagcaa tcatcttttt tactatttta
     3121 gcaggtttat ttccttcatc tgctagctgt tcaattcttg ttgctctaat ttttactaat
     3181 gcaaattctg aaccaacaaa tacagtggtt aatgcaatta atagaataaa tataatcaaa
     3241 ctaattatgg tcgaagtttc caattaattc cctatttcta gggattcacc tccatgttat
     3301 atgtgtcact catgggtaac acgcattcaa atttatcact atgacttaaa ttacaactac
     3361 atgttatcgc cttcccattt agacaccccc agaaaaaaat gttattgcct ctattttatc
     3421 ataatataaa gtgcttatgt taacagatta aatctattgc atacatttaa ttatgattat
     3481 ttattagcta aatgtgtgaa ccttaccttg ttttattgta gattttacat tcatgtcatc
     3541 atctagaata acaagatctg catccttatt tactttaata ctaccttttc tatcatcgat
     3601 acctaatgca atggcttgat ttaaacttgt tacacgccat aaatgatcta atgtatcacc
     3661 tgtaaatgat attaagttac gtaacccatg attcattttt aaaatactac cagcaagcgc
     3721 accatttgca agacgtgctt gttgcgattg aacagttact ttttgaccac ccaaatcata
     3781 ttctccttca ggcatacctt ttgcacgcat tgcatcggta attaaataaa aacgtttatt
     3841 acctttcata cggtaagcaa ttgcaaccga tgccggatga gaatgtgtgc catcaacaat
     3901 catttcggta tgtaaagcat cattcaacca tgctgctcca aaaacacctg gttctctatg
     3961 ttggaatggc gtcgctgcat tatataaatg cgtgacatgt ttagctcctc gctcaacagc
     4021 ttcaactgct tcttcgtatg ttgccactgt atgaccaatt gaaaaaataa tgtcatcttt
     4081 atacgtttca agcgcttctt ttgcaccttc aacttcaggt gcaaacgtca taatctttat
     4141 taatccgtta gcagtctctt gaaaatgttt aattttatcg ataaatggac gtacaacgta
     4201 ttgcggatgt tgagcaccaa ctttattttc agatataaat ggcccttcca aatgtatacc
     4261 tacaatttcc gctgcattgt gaacatcttg ctccacttca tatttagcaa tatttataag
     4321 tgctttatct attttatcag tcgattgcgt cattgtagtg gccaagtatg atgtcgtccc
     4381 ttcagacaac aaattttcgg atagatattt taagccatcg tatgacccat ccattgcatc
     4441 ctgtccataa ccaccatgaa tatgtatatc gataaaacct ggcactacat gatgaccttt
     4501 tgcatcaatc acttgaattt tatttgtcgt atcattatca atcgctgctt tatcatttac
     4561 ttctccaatt gcaacaatct gcccatcttt cacatgaatg taaccattat cgattttgcc
     4621 atcttcagta taaactttgc cgttatatat aattaattct gacacgtata aacccttctt
     4681 tatttataaa ttttcacttt aagacactca tattttacta tatctgcttc gtttggcata
     4741 actttttgca aaatattaaa aaagtcttta catttgtggt gtctatttct tcattcattt
     4801 atctaaaaat aaaaacacct tcatatcaat tcataaaaac tgaattaata gaaagtgttt
     4861 ttacagcttt gtataagcta ccgttaacac gatatataaa actaacatat attcattgaa
     4921 cttacaactt aatatgaagc tctttgctaa caatcacttt aaatcattaa aactattcgt
     4981 ccattgattt tgaagcttcg atttctgttt cagttaactt tggtttaata agtccataaa
     5041 ttaatgctga aactaaggta ccaactagaa gtgcaataag agtttgaagt aagtgtgcac
     5101 catcagtacc aacaattaca ataataccac cgtgtggcgc agtaattcga gaacctaagc
     5161 ctaaagcaat tgcgccacct atacctgaac caatcatcat tgaaggaata acacgtaatg
     5221 gatcggcagc tgcaaatgga atcgcacctt ctgtaataaa cgacataccc atcacatagt
     5281 tagggataat tgaaccacgt tgttcttttg taaatttacg tctgaaaatt aacatcgctg
     5341 tcgcaattgc taacggtgga atcataccac caatcattgc agctgtaatt ggtgctgcat
     5401 taccttcaat caacgcacct gttgcaaaaa catatgccgc tttgttgaat ggaccgccca
     5461 tatcaatcgc catcatagcg ccaataacta aacctaataa tacaatatta gaacctgata
     5521 aattgtttaa tccatctaat aacaaatgat ttaaccaaga tgctggtgga ttaaagacat
     5581 aaatcatcaa taagcctgta gctgtcactg ttaatagtgg ataaattaat gtcggcttta
     5641 atccctctaa tgcttgtggt aacttacgtg tcatcgcttt aacaccttgt gttaagtaac
     5701 ctgctaagaa acctgcaata ataccaccaa taaatcctga accacctgaa attgctaaca
     5761 taccacctac aagacctgaa gcgaatccag gtttatccgc aatactacgt gcaataaatc
     5821 cagataaaat tggaatgatt aacgcgaatg cacttttact accaatgttc caaagctgct
     5881 ctgcaaacgc attgtactct gagctttttg gattaaatga atttgctcca aataaaaata
     5941 caattgccat taaaatacca ccagatatta caagtggtaa catgttagaa acaccgttca
     6001 ttaagtgttt atagaaagct ttacctgggc ttaatttttc ttgactgtca tttgagttac
     6061 cttttctttg accatcacgg gcaacaaaag gtttacgact tgtatctaat gctttattaa
     6121 ttaattcttc tgggcgttta ataccatctg ctactggtac ttctacgaca tttttaccat
     6181 cgaagcgatc cgtctcaaca tgaacatcag cagcaacaat gatacctgtt gcatttttaa
     6241 tatcttgttc cgttaaatgg tttttaatac cacttgaacc gttcgtttca actttaattt
     6301 taatgcccat tttatccgct tgctttttca atgcatcacg cgccatatat gtgtgtgcaa
     6361 tacctgttgg acaagcagtt acagctaata catatggctc gtttgatcca ttagtgtctt
     6421 gatttgcttc tacagcagca acttgttgtg cttcagcttc agcttctgcc tcttcttctt
     6481 ttgtcgcttc atcatcagca tgatcgataa ttgctaacac ttcttctgga gacgatgcat
     6541 gtaataattt ttcacgtaca ttttcatcca ttaaaatacc agatagttta gctaaagcat
     6601 ctaaatgtgt ttgggcacca ccttctggcg ctgcaatcat aaagaataaa tgagctggtt
     6661 gcatatctaa actttggtaa tcgacacctt ctttagattt accgaatgcg atagctggag
     6721 acttaactgc ggctactttc gcatgtggaa tagcaatacc ttcgccgata ccagtcgtac
     6781 tttgtgattc tcgattgtga atcgcttctt taaatgacgc gacatcactt aatttacctg
     6841 ctttgtctaa ttgatttact aactcatcaa taacaccatt tttgtcattt gccattaaat
     6901 ccattgctat tgtatctttt gttaataact ctgttactct cattattttc actccccatc
     6961 aagtacgcta atcgtaactt gtgattttat tttttctata gcgtcccgtg ttgctaagtc
     7021 ctcatcaaat gccgtggcag taccgcatgc gactgcttgt tggaatgctt tttcaatcgt
     7081 taaacctgaa gcaattccag ccaccatgcc tgcaactgta ctatcaccag agccaactgt
     7141 attaaccact ttcccttgtg gattaactgc tttaatactg atttctttat caatataaat
     7201 agcaccatca ccgccaagtg agacaataac agattgcgca cctttatcaa ctaacaaacg
     7261 accatattta ataacatctg cgtctgagtt cactgttgta ttaaacatca cttctaattc
     7321 atctttatta ggtttaataa atagtggatg atatggtaaa acgctttcag ccaattcttt
     7381 ttcagcgtcg actactaatt tagcacctgt ctgtgctgta atttgtgcaa tttgcgcata
     7441 tgcatcactt ggaatactac ttggtacact tccagcaaca ataactatat cttcgcttgt
     7501 tgtattttta atttgttgta acagttgttc aaattgtgtt gacgttatat gaggacccgg
     7561 tgcattgatt tctgtttctt gtcctgtttt taatttcaca ttaatacgtg tatcttcatc
     7621 aacttcaata aaattcgatt gaattgcact attatttaat gtatctataa tgaatttccc
     7681 aggaaatcca cctgcaaatc ccaaagcagt tgactcaaca tccaatgtct ttaaaacacg
     7741 tgagacatta ataccttttc ccccagcgaa tttatatgtt gctgttgctc tgttcaaacc
     7801 atcaatttta aaatcattcg taaaaatgac atagtcaatt gaaggattga aagtcactgt
     7861 ataaatcata aagtccctcc tataaagtga tacttttgtt ggtattcttt taacgattct
     7921 tgatttaatg ctttttcaga tgtgatgatt gtcgtacttt ctagcaaagg tacacgagca
     7981 aaatatactt tattaaactt agaatgatct ataagtacaa atgattgatt ggctaatgac
     8041 attgctgttt gtttaactaa tgcctcttgc tcatcgggag tagttaatcc aagttcaata
     8101 tctaatccat tcatcccgat aaaagcttta tcgaaacaat atcgtcttaa tatctccatg
     8161 gcacttgaac caatcgtagc aagtgtattt tctttaactt gaccacctag cataattgtt
     8221 ttaatacctt ttttaagtaa agcttctaca tgtgttaaac cattggttac cacaatgata
     8281 tctttcgctt gaatatattt aattagctcc aatgtagatg aaccagcatc gataaacaag
     8341 cattcattat cgttgatttg attagctgct attttagcaa tcattttctt ttcatcgaga
     8401 ttagttgcta atttttcagt taaattcgcc tcaaccatac gattttcttt taacattgca
     8461 ccaccatgca cacgttgtaa tttccctaat tgttgtagtt tagataaatc tcttcgtatt
     8521 gttgaagcac tgcatccagt tcgatctatt aattcttgta aagtcaaaaa atctttgtgc
     8581 gaaagttctt ctaatattaa ctcgtgtctt ttttctgtaa ttatcatcat caccccatct
     8641 cactttgtat tataatgagt acgctttcac ttttcaatca taaattacca aaaacaatca
     8701 caaacaatca aattgtgacg ataaaattac atttttatgt tcaaatactc aattatcatg
     8761 attgtttatg atcgtaaaat gctaattcaa tcaaaaagag tgtggcagaa atgaatttta
     8821 taaaaatttc atctctgtca cactcctaat cttgccccat actttttgtt gttattaatc
     8881 attcatggat aactgctcca attttgcctt tagttattgt aatcaaatcc tcaacagcta
     8941 tcgtgatttg cattgttcga agcccaccac tcacactgat atgactataa ttttcacagg
     9001 atttgtcaac gactgttgga aacaatgttt tcataccaac aggtgaacac ccaccacgaa
     9061 tgtatcccgt tacatttttt aaattatcta aaggcataag ttgcaatttc ttctctccaa
     9121 ctaaagcagc tgcctttttc atatctaaag tttcacttac tgggataaca aatacaaaat
     9181 gttcatgttt tgtattttct agaacaagtg ttttaaatac tgttttaaca tttgcttgta
     9241 tgagttctgc gacttcttgg ccagataaat gttcttctgg tacctcaaag ctatgaactt
     9301 cgtatttaat ttttgcacga tcaagcatac gcatcgcgtt agttttctta tttttagcca
     9361 tttcaacacc tcatttatac ttcttcagaa ctatattaac attttaaaat acattacaga
     9421 ttggttgatt ttgacataac atttacatca ttttataagt tgatttcagc tttttaaatt
     9481 aaaatattgc aaaataaaaa cagtatatcc aattagaata cactgttcca tctattattt
     9541 cgttattatg cctttatttg aaatacttac atgttgctta ctagttgaat tatcattgga
     9601 ataaacataa ttatatccat gatttgtctt agaaattctt tctaaagcat aattatcgtt
     9661 gatatgctta tctgcataac gatcagcaat aacttggcac tcttgttcgt taaaagaatt
     9721 tgatttattt gcattcacac gatgcttaaa atgattttgc tttttcacat tttcattcac
     9781 ttcagatgct ttagcagtat gaatattgag aatatccatt ttctttttat aagtatcttc
     9841 agttgataca tttatcgcgt taagcgtatt aatcgtttta tgtaccttag caagcgcatc
     9901 ttcatttgtt gctaatatta ataaaccaat taaacaaacg gttaatatta cagcaacaaa
     9961 gcctaaaaat aaatttttta ctgtcatccc cttacccaca tttccttact cattttttat
    10021 catcttaaca cattaacgtt aatgaattag gtatgtggat tgcaatttaa aaagaatgta
    10081 atatttgtaa catgtttatt actcaaaatc attttttgtt acatataaca tttaaatata
    10141 aagagtaaaa catttagtca atcgaatctt tttaaatgta aagcatcgaa ttttcttaat
    10201 aaaattcata agaaaaacga tgctaatcat tcataatatt acgctttact ttatatcaat
    10261 atacaccaaa atacttatgc tacatatttt gttctttcaa ttttgctcta tgttgctttt
    10321 caattaaaac aataacaaca cctgctaatg aaacacctat agccatataa attggtgctt
    10381 caatgtgtac atcaaataac gcacctgcga ttaaaggacc tatgaaatta cccatactag
    10441 tgaatgtcga gttcaatccg cctgcaaagc cttgcctttc tccagcaata ttagaaaaat
    10501 aatttgtaat ggctggtcgt atcatatcga aacctatgaa gacaacaaaa ctgattaaca
    10561 ttattgacca atagccatta gcaaaaacta ataatattaa gacaacaact gaatataata
    10621 atgaccaagc tataaatgtt aactctgaga aatacttcat aaatttatcg aagaaataga
    10681 tttggaaaag tgccccaaat ataccgccac ctgtaatagc aatcgaaata tctttaggtg
    10741 aataatttac cttgtcagct gtgtatagtg aatacaatgt ttcaaatgca gataaaccga
    10801 acgctaagac gagcgttaaa attgctggcg taataaagac tttccaatta atttttgtta
    10861 ataattgggg ctccaacttt tggaatccat ttgtcgaaac ttttttaggg tcatgaatca
    10921 atacaattga cattataaat gctagaacac ctaatgctcc tgcaaagtaa aatggcatac
    10981 gatgtgaaac ttctgccata aatccaccaa tccctggtcc taaaatgaat ccagaattga
    11041 taatcgctga catgtagcca aagttttttg ctttttgatg gcttggtgaa acatctgcaa
    11101 tcaaacctgt cacaccaggc attaccatac cagcactcat accaccaatc actctcgata
    11161 acatcaatac cgaaaaattg tggccaactg caaacataaa ttctgacact gaaaacaaaa
    11221 ttaatcctat acatataatt aatttctttc ctaatttatc agctaacgta ccaccgaatg
    11281 gcgatataat catttgagat aaggcgaaag cagcaactaa taatcctaaa tcactaccag
    11341 ttaaccccaa atcttttaaa taaacaggta agactggtat cactagaccg atacctaaaa
    11401 aaattaagaa aatattaaaa tataaaacca aaatctgttt attcatttgc tcacctcttt
    11461 tttctacttg tcactcttaa agctgttatt tttcttttcc acgacagatt gcaattcatg
    11521 ctaaatattc gtaaaaagtt tctatattgt attacaatat tgctacattt gacaatattt
    11581 ttttctttgt aattatcact attttccatt taattgtata attaatgaca tattaaaata
    11641 aaggggattg atcatatgaa attgcaaaaa agtaatcata ctatactact agtgttagaa
    11701 aaaggagaag atatcgttga atgtataaca aactttgcag atgaccaaga cttaacattt
    11761 acatctgtca gcggcattgg tgcatgtgat gacgtcgttt taaaattttt caatttaaca
    11821 acgaaacaat atgaagaaaa acatattact gagccactgg aattgacgag cttattaggc
    11881 aatatttctc gtctagataa tggacatttt gcacatttac atgcaacatt tggtacgcaa
    11941 tcatatcaaa catatagcgg acatttatca aaagctattg tttctgctac agctgaaatt
    12001 gtgcttactg taactgattt ggacattcaa cgttcattca acgatgcagt tggtttaaat
    12061 ttacttgatc cacaataaca cattactttt tagttgaaac acatcaactc aaacgttatc
    12121 ataagtgttt aattataaat gcattcgcac tttggtttag acatttctat agtaaataaa
    12181 cctttaaata aagttttgaa tgtaattata attaccacat taatatgaat aacttttttc
    12241 attagaaagt agtgtatatc atttatgaat tcacgataca tcgctagaat ttacttttta
    12301 gtattattta ttgcgtcact atttgagaat aaaatatatc aatttatgac attaaattta
    12361 tttttagcat atataccttt tgagctaagc ctacttttgc gtttatttaa acccaataaa
    12421 aaatatgaat ggccgctctt cgtcatatat agctttatat ttgtattact tttacctaac
    12481 acattttata tggtaactga tttaattcat ctaaaccaat ttcaatttaa cttttatgca
    12541 gggcttaact tatttgaatg gaagtacttt acttatttac tgttaggtgt ctttttagca
    12601 atttatgtaa tgattttaat ctattttgaa attttaacgc ttacttctca tccatggctt
    12661 aatagaataa ttgttgtaat tcttatgttt ttaaatggct tcggcattta tatcgggcgt
    12721 ttcttacgct tacattccgt atacttcttt aatgaaccta tacgcgtctt aaatcacatt
    12781 ctaaaaagtt taacaatcga cacagcaata tttgtatgct ttatggttat gatgcaagca
    12841 gctattttat tattcggaaa aggagttaga ttgaaaaagt gactttagat ataaccgttt
    12901 ttatgatatc aatcatcgtt cttcaaatga ttattggaca cctatggcat gatattggtt
    12961 taagttacat aagaagtatt ctgctgatgt tatttccgct aggtataggc gtttttgttc
    13021 aacaaatgat ttatttcgaa cgacaatatc ctaaatggga tgttcctcaa catataaaaa
    13081 taagactaaa gtatatttat atcattacat ttttggaata tgtcttgcta tatttcacta
    13141 tgtttactga catattcaga tagaacaatt taaacaagct aactatggca aaacatgtct
    13201 tagttagctt gttttatttt agttggaaca tcaattagtc taatgcttta aatgtcgcta
    13261 aaacttgaga tctcttttct tgatgatcta ccatttgtct tggataatga cgacctaact
    13321 caatcccttg tttaaataat tcagattcat ttcgatgtgt atcatgcaaa tatttagcat
    13381 caatttgatt aaaaatcgga atatatgttt tgatatacaa agctttaaca tcaaagcgtt
    13441 cactctgtct tattggatta aacattctaa aatacggcac tgcatccgta cctgtagaag
    13501 cagaccattg ccatccatga atatttgatg ctgcatcata atctataaga tactttctga
    13561 agaaatcctc tccccaagtc caatctataa ataaatcttt agttaaaaat tgcgacacaa
    13621 ccattctcat tcgattatgc ataaaaccag tttgtgtcaa ttccattatt gctgcatcaa
    13681 tgattggaaa tcctgtttgc ccttcgcacc atgcattaaa atccgcttca ttttgcgacc
    13741 attttatctg tcgatattta ggtttgaaag cttggtatga ggtttctgga tactgtgtca
    13801 ttaacacata ataaaattct ctaaaaatga gttcacgtat aaatgcttca tagtttgcct
    13861 catcttcttc atatcgtgat aacaaatcat tgaaaatttc aataatatct aataagccat
    13921 atgctaaagc aacacttagc tgacttgtta acacttcagg taaatagtct cttccgcttt
    13981 cgtaattctg tatatcttga tctaaaaaat gttgccattt attctgttca attatttgtg
    14041 aggatccaaa tgctatgtca tcaaacacta aatcatcagg tgatgcaatg acgaagtctt
    14101 cgaatgattt taaatcatag tgatatacgt ctctatgcct caagtaaggt cgccattttt
    14161 tataaaaact agtaaaaact ttgtatggct ccccttgttg attcattgtt ttactcgctt
    14221 taaagtaatg attcccacgt atcaaagtaa cggcaatacg tgcatcattg aataaagagc
    14281 gttgatgtaa aatatcatat tcttcaaggt gataactcat aatatcacct gcaatcacta
    14341 cttcagagat attgttttct ttacaaaatg aaatgatatc gtcataagac atgacataag
    14401 gtgtgagctt ttctgcgtgc aacgattggt aaaagcgctg caaagtaccg cgataaaact
    14461 gtgctttcaa atcagaagct gaagacatgt cctcttccgg aatgataaaa taacatgcat
    14521 caatgtcttc tttttgttga taaatatatt caaataatgg attgtgttct attcgaaaca
    14581 ttcgatttaa taacacagca attgccataa acaaaacacc cttcaattat ctttttattt
    14641 tattaagctt tttgtcactt taaaataacc tagattctta tttatatttt aaattaaagc
    14701 aaacctaacc atttccaata agtcatacta aaaactatca ctagaatata ccctacaatt
    14761 gtcaatggta tacctgcctt caagaaatct ttaactgtaa aagtaccagt gccataagcc
    14821 aacatatttt gaggtgcact aacaggtaat aagaaaccaa aactaataac aaattgttga
    14881 attaaaacaa atcctataga ctggtctcct aagtgtaacg tagaggttag cgaaataaaa
    14941 acaggtatta acgctgatga taaacttgtt gcactcgcaa agcccaaatg aatcaatata
    15001 ttaaaaagcg tgataagtgc aattgtcgcg ataataggta aatgttttaa acctaaaaca
    15061 ccaaaagttt gatcacttaa ccattgagct gcacctgttt tcaaaagaac gttacctagt
    15121 gaaataccta caccaaacac gataattgtt ccccatggta ttttattttc aacatgtttc
    15181 catgtcatga caccaagttt cggcattaac ataacaccta aagcaataat agtaatagat
    15241 gcagagtcaa tcggatgtaa tactttttca gttgaccaaa acagtaataa taacatcgat
    15301 ataacaatta atcgccattc acgcgcgcta acggggccaa gtttatgcaa ttcttctttt
    15361 attaaatctt tgccaccctc tatagtatta atttctggag gcatcacttt aatcatgatg
    15421 aaatataaag ctatagacat aactatggac caaggcgctg catataagaa ccactcgccc
    15481 catgaaacat caaatcctaa ttgatggttt ataaaattaa tcgctacgat attttgtgct
    15541 gccgccgttt tgataccaat attccaaatt gacacagctt gtactgaagt aattattaat
    15601 aaagacgcta acttgctatc tttagaaact ttaaatgctg caatcatacc cagcaagatt
    15661 ggtacaactg cccctgctct agctgttgca gaaggaacga aaaatgcaag tacaattgaa
    15721 acaataattg ctccaataac tatatttcta gttttattac caacaattga tagcactata
    15781 agagctagtc ttttatgcaa attcgtttct tgcatagcag cagccaaaaa taatgcggct
    15841 gcaacgagag ctacagctga tgttgcaaat ccactaaacg ctaatgataa tgcatgattt
    15901 gttcctagaa gatcacttcc agttaaaaca gcactaccac ttttcgggtt acccagcttt
    15961 tctcctaaat tttgaaccgg gctaaatcct aaaagtaata tcattaagcc aataattaaa
    16021 gttgctgaca ccggatatga tacagcttcc gttacccaca taataactgc aaaagctaaa
    16081 atagctagta ctgccttagc cattattggc agacttgaag gtgctgggag taatagtaca
    16141 actataagta ttataaaact cataacaatc caaaatggct tgtattgctt ttttgtcttt
    16201 tcattctttt gtcgttcatg tttaactacc tttttttctt ctgacataac agtcacccct
    16261 ttgtttaatc ttaatttaat tataacaatt ttttaaaaca tacattttta attaatgcaa
    16321 aatacacaat tttatcgaaa tattttgtaa ataatattgc taggtgatga gttatctcgg
    16381 ttaattacaa aaagatatct aagtttaaat attagaacat aaaaaaacta tctactgaat
    16441 atcctcatag catcattttt ctaagcaaaa gttaaactta gttagataaa atgcaaatga
    16501 gattattgta gatagtctct ttttaatatt taaaaatgat taatgccata aacataaata
    16561 attccaaaga atgccgcgcc actaagcact gttaatataa gacttagtaa caatgtgcgt
    16621 ttataatgtt taataaatgc tatgaacaaa atgactacat tatacgcaaa gaaaagtccg
    16681 aataatgtca ttgttatttt caaatcagaa tagaaaatat ttaatagtaa tacaatgact
    16741 gcataaatta catacggaat aactataaat ttgcgttcaa atcttaattg ttcgaaacgt
    16801 ttatcttcgt ttgtcatgat atgctccttt atgatttaaa agtaaataag tttacggaat
    16861 atcttgtccg ataatagcgg tgtaaatgtc aaaccacgac tgatcatcta aatttagttg
    16921 cagcccttcg attgcttgat caatacgctt taactgactt gttccaagta tcggcatgat
    16981 acgatgcggt atttttacta accatgctat catcacagct gtgtcactca caccatattt
    17041 gtcagctatt gattgaataa ctttcataat acgttgcgct ttaatatctt ccttgtcgaa
    17101 aattttaccg cctgcaaaag gactccaagc catgatttga acatggtttt gatacattga
    17161 atccattgtt ccatcttgta aactatcaac gtgatatggc gataattcta attgattgat
    17221 gctaatatgt agtctttctt tcataatata ttgatttaac aattggtatt gagaatgatt
    17281 aaaattcgac accccgaatg acttcaactt accttgttta acaagtttag ttaatgcatc
    17341 agcaacttgt tctggatcca tcaatggtga aggacgatga atgagtagac tatctaaata
    17401 atctacattc aaattgatta atgactgttc aacagatttc acgatgtgct tactactcaa
    17461 atcataacga tgtccatttg taaaatcaaa ttgcttagaa ggcaaaatga taccacattt
    17521 cgtaacaatt tgaattttat ttcttaattc gggtgataaa tccaaagcat taccaaacag
    17581 tgtttcacat tgataatccc cataaatatc agcatgatcc atcgttgtaa tcccacgttc
    17641 aactaattcg tttataaaat aatttaactc tttcgcagtc atcttccatt catttgcacg
    17701 ccaaaaacct tgtacaagcc tagaaaaatg aacatagtga ttaatcatta tttgttccat
    17761 atctcatcca ctccatccct caatgtcaca aaatattcac aataaaagta ttaagaaatt
    17821 aatgtgctat ttccgttaaa ttgaaacaac acattttctg atttacgtaa attgtagcat
    17881 atccaattga ttacgtatgt gatttgtatc taaagtttca ccaataataa caatcgttaa
    17941 tggtaattgc atgccaatta ttccatagtc tggtaaacca tatgcatatt gaaattcata
    18001 aattgcattt ggttgatctc taaatgatac ataacctttc aaacgtagaa cagattccgg
    18061 taatttcatt atgaattgat aaaacaattg acgatcaatc ggacctgtaa atgtgtaagt
    18121 catactttta atcccatgat gatggtgatg atgagacgat atctctctgt ctttaccaag
    18181 taagtccaat tcttccaacg aaacttgtcc ataggttgtt ttataagttg gaatacttgc
    18241 acaaatcata cttaattgct tatcaatttt cttaagactg tcatcagtta caagatcaat
    18301 tttattaata ataatcatgt cacttagttt caactgattt tccatcagcg aaactgtatt
    18361 ttcggtatat tgatgacgtt ccaaaaatcg agtcgcatct aatacaccat aaataattgg
    18421 cttttcaaag aaattaacga tttgcggatc ttgacatgca actagtaatt ctaaaggatg
    18481 cgcaatgcct gtcgcttcta tgatgacatg attaacgtcc ccttttaaag caatggcttt
    18541 tagttcatag acaagttctt gtttaagatc gcaacaaaca caaccattaa tcaatgaatg
    18601 gacttcaatt tcattcgaaa tactattgct atcaatatca aaagtaccga attcattcat
    18661 gatgatttta attttctcat cattttttaa taattcacta atataat
//
LOCUS       DALMNS010000057        18318 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.057, whole genome shotgun sequence.
ACCESSION   DALMNS010000057 DALMNS010000000
VERSION     DALMNS010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 18318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18318
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.057"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(793..1722)
                     /locus_tag="O6Y56_001596"
     CDS             complement(793..1722)
                     /locus_tag="O6Y56_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001574632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDB5574850.1"
                     /translation="MLLFYIIGVLVGMLIPIQTSVNSRLSLYTKSPFYTSFISFSVGT
                     ICLIVLNIFINPDVFSLHFFSNQTFDYTWFVGGLLGVGYLTGNLLLLPKLGATLTVIA
                     TVAGQIIMGVIIDTFGLFGATIHDFNLIKAIGVLLLIIGIVIMNQFNKNNLLLTDQRY
                     LLFWLLLGFIFGFFPPIQTTINSALASHTHSPAFASLVSFTIGSITLLILTAIFNRSL
                     KLKTSHLKFGKLKPIYFTGGILGMAFVTANIILMPHMGAALTTLIGMFGQILMGILID
                     HFGLFGSPKIAMTSRKTIGLLCILTGIILLRLF"
     gene            complement(1917..2141)
                     /locus_tag="O6Y56_001597"
     CDS             complement(1917..2141)
                     /locus_tag="O6Y56_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499185.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2922 domain-containing protein"
                     /protein_id="HDB5574851.1"
                     /translation="MTKTLELSFKSSLDKPVKLQLPQLNNVVTEQVARDSMNALVDLN
                     IIKSNSGTITKVHSAQIIDKTTTVLFEDKK"
     gene            complement(2158..2361)
                     /locus_tag="O6Y56_001598"
     CDS             complement(2158..2361)
                     /locus_tag="O6Y56_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1659 domain-containing protein"
                     /protein_id="HDB5574852.1"
                     /translation="MSKINHITIVLSFTKVDANGKQTEFKRRFANINPDASNDQIKTF
                     SKLIERLTGETYSNIELIKSLSI"
     gene            2520..3080
                     /locus_tag="O6Y56_001599"
     CDS             2520..3080
                     /locus_tag="O6Y56_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDB5574853.1"
                     /translation="MNKVEAIKFNDDIVKMYEALKIKSERDYLFFKLAIHSGLKVSEL
                     LTITVSQVNRLIEKCTLSEMCKAHFHSLIKIKLPETLSKELLQYIEDRSLSNEDVLFQ
                     SLRTNQVLSRQQAYRIIHQASIEAGIENVGLTTLRKTFAYHAYQKGIPIPVIQKYLGH
                     QSAIETLNFIGLENECEHSIYISLQL"
     gene            3099..5501
                     /gene="mnhA2"
                     /locus_tag="O6Y56_001600"
     CDS             3099..5501
                     /gene="mnhA2"
                     /locus_tag="O6Y56_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit A"
                     /protein_id="HDB5574854.1"
                     /translation="MSLVYLLIAILVIMAMILLMSKRRALAKYAGYIALIAPVISSIY
                     FLIQIPSVAKLQYLSTSIPWIKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYL
                     SSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQ
                     FGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADHIKNHGLFMPMIFMFLL
                     GAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYI
                     VTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHLQDAIASI
                     YVFVLFAALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIA
                     ALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIAIVFVGVIASVFTFTYALYM
                     VKEVFWTKYDSKVFTKKNIHEPWLFSLPSLILMVLVPVIFFVPNIFGKWIIVPALRAV
                     SAGNHQIDQLAPHVSQWHGFNIPLLLTIIIILLGSVLAIKVDWKKVFTGKIRQISVSK
                     SYEMIYRHFEKFATKRFKRVMQDRLNQYIIMTLGIFMVIIGYGYIRIGLPKVHQLHVS
                     EFGALEIILAIVTVTIGISLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLV
                     VETITTILFIVSFSRLPNVPRSNANKKREIIKISVSLLMALIVVSLIFITQQTDGLSS
                     ISDFYLKADKLTGGKNIVNAILGDFRALDTLFEGLVLIITGLGIYTLLNYQDRRGQDE
                     RE"
     gene            5488..5913
                     /gene="mnhB2"
                     /locus_tag="O6Y56_001601"
     CDS             5488..5913
                     /gene="mnhB2"
                     /locus_tag="O6Y56_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit B"
                     /protein_id="HDB5574855.1"
                     /translation="MKENDVVLRTVTKLVVFILLTFGFYVFFAGHNNPGGGFIGGLIF
                     SSAFILMFLAFNVEEVLESLPIDFRILMIIGALVSSITAIIPMFFGKPFLSQYETTWI
                     LPILGQIHVSTITLFELGILFSVVGVIVTVMLSLSGGRS"
     gene            5910..6254
                     /gene="mnhC2"
                     /locus_tag="O6Y56_001602"
     CDS             5910..6254
                     /gene="mnhC2"
                     /locus_tag="O6Y56_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit C"
                     /protein_id="HDB5574856.1"
                     /translation="MNLILLLVIGFLVFIGTYMILSINLIRIVIGISIYTHAGNLIIM
                     SMGTYGSSRSEPLITGGNQLFVDPLLQAIVLTAIVIGFGMTAFLLVLVYRTYKVTKED
                     EIEGLRGEDDAK"
     gene            6244..7740
                     /gene="mnhD2"
                     /locus_tag="O6Y56_001603"
     CDS             6244..7740
                     /gene="mnhD2"
                     /locus_tag="O6Y56_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit D"
                     /protein_id="HDB5574857.1"
                     /translation="MLSNLLILPMLLPFLCALILVFLKNNDRISKYLYLGTMTITTII
                     SLMLLIYVQRHRPITLDFGGWSAPFGIQFLGDSLSLIMVTTASFVITLIMAYGFGRGE
                     HKANRYHLPSFILFLSVGVIGSFLTSDLFNLYVMFEIMLLASFVLITLGQSVEQLRAA
                     IIYVVLNIIGSWLFLLGIGLLYKTVGTLNFSHIAMRLNDMGDNRTVTMISLIFLVAFS
                     AKAALVLFMWLPKAYAVLNTELAALFAALMTKVGAYALIRFFTLLFDQHNDLIHPLLA
                     TMAAITMVIGAIGVIAYKDIKKIAAYQVIISIGFIILGLGTNTFAGINGAIFYLVNDI
                     VVKTLLFFIIGSLVYITGYRQYQYLNGLAKKEPLFGVAFIIMIFAIGGVPPFSGFPGK
                     VLIFQGALQNGNYIGLALMIITSLIAMYSLFRILFYMYFGDKDGEEVNFKKIPLYRKR
                     ILSILVVVVIAIGIAAPVVLNVTSDATELNTSDQLYQKLVNPHLKGED"
     gene            7741..8223
                     /gene="mnhE2"
                     /locus_tag="O6Y56_001604"
     CDS             7741..8223
                     /gene="mnhE2"
                     /locus_tag="O6Y56_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit E"
                     /protein_id="HDB5574858.1"
                     /translation="MNQIVLNIIIAFLWVLFQDEDHFKFSTFFSGYLIGLIVIYILHR
                     FFSDDFYVRKIWVAIKFLGVYLYQLITSSISTINYILFKTKDMNPGLLSYETRLTSDW
                     AITFLTILIIITPGSTVIRISQDSKKFFIHSIDVSEKEKDSLLRSIKHYEDLILEVSR
                     "
     gene            8220..8522
                     /gene="mnhF2"
                     /locus_tag="O6Y56_001605"
     CDS             8220..8522
                     /gene="mnhF2"
                     /locus_tag="O6Y56_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000616642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit F"
                     /protein_id="HDB5574859.1"
                     /translation="MIQTITHIMIISSLIIFGIALIICLFRLIKGPTTADRVVTFDTT
                     SAVVMSIVGVLSVLMGTVSFLDSIMLIAIISFVSSVSISRFIGGGHVFNGNNKRNL"
     gene            8497..8934
                     /gene="mnhG2"
                     /locus_tag="O6Y56_001606"
     CDS             8497..8934
                     /gene="mnhG2"
                     /locus_tag="O6Y56_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit G"
                     /protein_id="HDB5574860.1"
                     /translation="MEITKEIFSLIAAVMLLLGSFIALISAIGIVKFQDVFLRSHAAT
                     KSSTLSVLLTLIGVLIYFIVNTGFFSVRLLLSLVFINLTSPVGMHLVARAAYRNGAYM
                     YRKNDDHTHASILLSSNEQNSTEALQLRAKKREEHRKKWYQND"
     gene            9274..11316
                     /locus_tag="O6Y56_001607"
     CDS             9274..11316
                     /locus_tag="O6Y56_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HDB5574861.1"
                     /translation="MEIFETILIFIAVVILSSFVHTFIPKVPLAFIQIFLGMLLFITP
                     IPVQFNFDSELFMVTMIAPLLFVEGVNVSRVHLRKYIKPVMMMALGLVITTVIGVGLF
                     IHWIWPDLPIGAAFAIAAILCPTDAVAVQAITKGKVLPKGAMTILEGESLLNDAAGII
                     SFKIAVGVLVTGAFSLVDAVQLFLIASIGGAVVGLLIGMALVRFRLTLMRRGYENINM
                     FTIIQLLTPFVTYLIAELFHASGIIAAVVAGLVHGFERDRIMQVRTQLQMSYNHTWNI
                     LGYVLNGFVFSILGFLVPEVIIKIIKTEPHNLIFLIGITIVVALAVYLFRFVWVYVLY
                     PYFYLAISPFQKMMTKNDDDNPTTEKPPKRSLYALIMTLCGVHGTISLAIALTLPYFL
                     AGHHAFTYRNDLLFIASGMVIISLVVAQVLLPLLTKPAPKTVIGNMSFKVARIYILEQ
                     VIDYLNQKSTFETSFKYGNVIKEYHDKLAFLKTVEKDDENSKELERLQKIAFNVETKT
                     LESLVDEGQITNSVLENYMRYAERTQVYRQASLIRRMIVLLRGALLKRRVQTRVNSAS
                     SLSVTDNLMELNKINKLVHYNVVSRLSKETTKDNTLEVGMVCDGYLMRIENLTPSNFF
                     NSASEDTITKIKLNALREQRRILRELIDTDEVSEGTALKLREAINYDEMVIVDSMT"
     gene            complement(12276..13205)
                     /locus_tag="O6Y56_001608"
     CDS             complement(12276..13205)
                     /locus_tag="O6Y56_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HDB5574862.1"
                     /translation="MKKLVPLLLALLLLVAACGTGGKQSSDKSNGKLKVVTTNSILYD
                     MAKNVGGDNVDIHSIVPVGQDPHEYEVKPKDIKKLTDADVILYNGLNLETGNGWFEKA
                     LEQAGKSLKDKKVIAVSKDVKPIYLNGEEGNKDKQDPHAWLSLDNGIKYVKTIQQTFI
                     DNDKKHKADYEKQGNKYIAQLEKLNNDSKDKFNDIPKEQRAMITSEGAFKYFSKQYGI
                     TPGYIWEINTEKQGTPEQMRQAIEFVKKHKLKHLLVETSVDKKAMESLSEETKKDIFG
                     EVYTDSIGKEGTKGDSYYKMMKSNIETVHGSMK"
     gene            complement(13202..14038)
                     /locus_tag="O6Y56_001609"
     CDS             complement(13202..14038)
                     /locus_tag="O6Y56_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDB5574863.1"
                     /translation="MLEFVEHLFTYQFLNRALITSIIVGIVCGTVGSLIVLRGLSLMG
                     DAMSHAVLPGVALSFLFGIPMFIGALITGMIASIFIGYITSSSKTKPDAAIGISFTAF
                     LASGIIIISLINTTTDLYHILFGNLLAITNSAFLTTIVIGSIVLILIIIFYRPLMIST
                     FDPTFSRMSGLNTTLLHYFVMLLLSLVTVASIQTVGIILVVALLITPASTAFLISKKL
                     YSMMIIASLISVISSIVGLYYSYIYNIPSGATIVLCTFVIYIITLFFTKFTNRKKRGS
                     LT"
     gene            complement(14032..14775)
                     /locus_tag="O6Y56_001610"
     CDS             complement(14032..14775)
                     /locus_tag="O6Y56_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDB5574864.1"
                     /translation="MLETKDLNLFLGNKHVLKNISLSIPVRGEIIGIMGPNGAGKSSL
                     IKSLIGEFNATGTKLLYNKPIQQQLQHITYIPQKAHIDLDFPISVEQVILSGCYKEIG
                     WFRRPNKSARDKLKQLLSDLELESLRHRQISELSGGQLQRVLVARALMSESEVYFLDE
                     PFVGIDFSSEKLIMTKIENLKQQGKLILIIHHDLSKAKQYFDRIILLNQTLRYFGDSE
                     EAMSVTRLNETFMSSTDCSDPSQRSNITC"
     gene            14897..15541
                     /locus_tag="O6Y56_001611"
     CDS             14897..15541
                     /locus_tag="O6Y56_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HDB5574865.1"
                     /translation="MLTEEKEDYLKAILTNNGDKNFVTNKILSQFLNIKPPSVSEMVG
                     RLEKAGYVETKPYKGVRLTEDGLTHTLDIIKRHRLLELFLIEILKYNWEEVHQEAEIL
                     EHRISDLFVERLDSLLNFPETCPHGGVIPRNNEYKEKYITTILNYEPGDIVTIKRVRD
                     KTDLLIYLSSKDISIGNEVEIVSKDEMNKVIIIKRNDNVIIVSYENAMNMFAEK"
     gene            complement(15621..16373)
                     /locus_tag="O6Y56_001612"
     CDS             complement(15621..16373)
                     /locus_tag="O6Y56_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M50 family metallopeptidase"
                     /protein_id="HDB5574866.1"
                     /translation="MNYLSNFFNTTIQLNIYIIVIVAACYIAIHQYRHKPVLNYLDVI
                     LNYIPVLTHEFGHVLFNKLAGGRAKDLVIVTSPRERQQTLQQGFAITQSRHLAGQWLT
                     TIGGYFMPPIMLLIGLASSHYQIPSFFIFTYLLIFIYFLILTSRKGSPIVVITLISIM
                     LYFILKDENIGEIQLLVTMSYQYILGVLLGEVLQSSWTIAKLTFQRPSPQWDGSALKE
                     LSHVPIFIYSTIWIIFNLYAVNILLKYTHLIN"
     gene            16609..17373
                     /locus_tag="O6Y56_001613"
     CDS             16609..17373
                     /locus_tag="O6Y56_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WecB/TagA/CpsF family glycosyltransferase"
                     /protein_id="HDB5574867.1"
                     /translation="MTVEERSNTAKVDILGVDFDNTTMLQMVENIKTFFANQSTNNLF
                     IVTANPEIVNYATTHQAYLELINQASYIVADGTGVVKASHRLKQPLAHRIPGIELMDE
                     CLKIAHVNHQKVFLLGATNEVVEAAQYALQQRYPNISFAHHHGYIDLQDETVVKRIEL
                     FKPDYIFVGMGFPKQEEWIMTHENQFESTVMMGVGGSLEVFAGAKKRAPYIFRKLNIE
                     WIYRALIDWKRIGRLKSIPIFMYKIAKAKRKIKKAK"
     gene            complement(17434..18228)
                     /gene="tagH"
                     /locus_tag="O6Y56_001614"
     CDS             complement(17434..18228)
                     /gene="tagH"
                     /locus_tag="O6Y56_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acids export ABC transporter
                     ATP-binding subunit TagH"
                     /protein_id="HDB5574868.1"
                     /translation="MNVSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDIS
                     LKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDRNGEVSVIAISAGLSGQLTG
                     IENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEFIYQPVKKYSSGMRAKLGFSINITV
                     NPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEG
                     GKLKDYGELDDVLPKYEAFLNDFKKKSKAEQKEFRNKLDESRFVIK"
BASE COUNT         6159 a         2640 c         3093 g         6426 t
ORIGIN      
        1 aactaattaa aaatgagaag taaacaaaaa agtgtttata aaacaaatta ttcattagac
       61 acagtgattg tatttctggg ttagcatttg gtttagtcaa aaatatcagc attttttata
      121 atttacctta atttaatcgt caatacaagg taatttattt aatgaaacga tttagcgcaa
      181 ttaaatgttt cgatattcaa tgtgtatcta aagtgattct ttgtcatagc ttaacgcttt
      241 caagttaact tcttctaata tttataccca tttttcgaac ttttatcact aaaaaagaaa
      301 aatttttata atttttttaa tttagtaatt cccagtgcag ttttaatgat aaggaaaata
      361 cactatttta atgacaaaag taaaactata gcactttaaa gtaaatgtat agtaatccga
      421 ttgataacaa gtaatcaata ttagaaagta cgattatggt tcataattta aagcatcttc
      481 aatctttaaa gtcgactcaa tgaatgaatt aaagttgtac attttgactt atttttaatt
      541 aatttaataa ccaactatga aatattagca cgaataacat aatttttgct attaatttgg
      601 tgtaaattat taaaaaataa cattaattta ggtcttaaga atgagttgac tatcgaattt
      661 gctaaattaa aatttgttgt gtcaaagcat actacccata ttaatactta ttaaaactaa
      721 tttagaccac aaaaaaatag cttatcactt ttaaaaataa ttacaagtta aaatgataag
      781 ctgaatgtta aattaaaata atcttaaaag tataatgcct gtcaaaatgc ataatagacc
      841 aatagttttt ctggatgtca ttgctatttt aggtgaacca aataatccaa agtgatctat
      901 caatattccc attagaatct ggccaaacat cccaataagt gttgttaatg ctgcacccat
      961 atgaggcatt aagataatgt tagctgttac aaaagccatg ccaagtatac cgccagtaaa
     1021 atagataggt tttaatttac cgaattttaa atgacttgtt tttagtttta aagaacgatt
     1081 aaaaatagcg gttaaaatca atagcgttat tgacccaatt gtaaatgata ctaatgatgc
     1141 aaaggctggt gaatgagtat gacttgctaa agcactattg attgtcgttt gaataggtgg
     1201 aaagaaacca aaaataaagc ctaagagaag ccaaaacagt aaataccttt gatcagttag
     1261 taataaatta ttcttgttaa attgattcat tatgacgatg ccgataatga gtaacaatac
     1321 tccaattgct ttaattaaat taaaatcatg aattgtagcg ccaaataagc caaatgtatc
     1381 aataatgaca cccataataa tttgacccgc aactgttgca attacagtta atgttgcacc
     1441 taattttggc aataacaata aattgccagt taaatagcca acaccgagta atccgccaac
     1501 gaaccaagta tagtcgaatg tttgattact aaaaaagtgt aatgagaaaa cgtcaggatt
     1561 tataaaaata tttaagacga ttaagcatat agtaccaact gaaaatgaaa tgaatgaagt
     1621 atagaaaggc gatttagtat acagtgatag tcttgaattg acagatgttt ggataggaat
     1681 aagcattcca actaggacac caatgatata gaaaagaagc atatgaataa agtctcactt
     1741 tccaaagtta ataataaaat catatgtata cattatcatt atagagaaaa tatacaactc
     1801 atttataata atgttgaaaa aagcaggaca ttaacaaaac aaaatcaccc tagacaatca
     1861 tgatgaaagt ctagggtgtt agtatttata ctaaattaat tgcgttttct ttatatctat
     1921 ttcttatctt caaataaaac agttgttgtt ttatcaataa tttgagctga atgtactttg
     1981 gtgatggtac cactatttga ctttataata tttaaatcta ctaatgcatt catactatca
     2041 cgtgcaactt gctcggtcac tacgttgttt aattgtggta attgcagttt tacaggcttg
     2101 tctagtgaag atttaaaact taattcaagt gttttagtca tgaatatgtc ctcctgatta
     2161 aattgataaa gatttgatga gttcgatatt gctatatgtt tccccagtaa gtcgctcaat
     2221 aagtttgctg aatgttttaa tttggtcgtt tgatgcatca gggttaatgt tggcgaatcg
     2281 acgcttaaat tctgtttgtt tgccgttagc gtctactttt gtaaatgata atacaatagt
     2341 gatgtggttt attttactca tattttaaaa cctcctttca cactatatat cgaaataaaa
     2401 taataaaatg gctaatttta ttttctatgt ttaaaatcta taaaaaaggt aatagatata
     2461 tgtaactaaa atataaaata gctatgatta agacacttaa ggcaagggga ggttgaggta
     2521 tgaataaagt agaagcgatt aaatttaatg atgatattgt taaaatgtat gaagcgctca
     2581 agataaaatc tgaacgtgac tatttattct ttaagttagc tatacatagt ggattgaaag
     2641 tatcagaatt attaacaatt acagtctctc aagttaatag actaattgaa aagtgtacgt
     2701 tatcagaaat gtgtaaagca cattttcatt cgttgattaa aattaaatta ccagaaacat
     2761 tatcgaaaga actacttcaa tatatagagg acaggagtct ttcgaatgaa gacgttcttt
     2821 ttcaatcact acgaacaaat caagtattat ctagacagca agcatatcga attattcatc
     2881 aagcatcaat tgaagctggc atagagaatg taggactaac gacattgcgt aagacatttg
     2941 catatcatgc ttatcaaaaa ggtataccta taccagtcat tcaaaagtat ttagggcatc
     3001 aatctgctat tgaaacacta aattttatcg gtttagaaaa tgagtgtgaa catagtattt
     3061 atatttcatt acaattatag aaacaaagga ggctaataat gagtttggtt tatttattaa
     3121 ttgccatact tgtgattatg gcgatgatac ttctaatgtc taaacgtaga gcattggcta
     3181 aatatgccgg gtacatagcg ttgattgcac ctgtaatttc atctatttat tttttgattc
     3241 aaataccatc agtagctaaa ctgcaatatc tttctacctc tattccatgg attaagacat
     3301 tagatatcaa tttagattta cgtttagatg gtttaagttt aatgttttct cttattattt
     3361 cacttattgg aattgcagta ttcttctatg caactcaata tttatcctct cgaaaagaca
     3421 atttaccaag gttttatttt tatttaacgt tatttatgtt cagtatgatt ggtattgtat
     3481 tatcagacaa tacgatattg atgtacattt tttgggaatt aacgagtgta tcatcatttt
     3541 tattgatttc atattggtat aacaatggtg acagtcaatt tggtgcgatt caatcattta
     3601 tgattacagt atttggtgga ttggcgttat tagttggttt tataatgctg tatatcatga
     3661 caggaacgaa taacatcact gacatattag gacaggcaga tcatattaag aatcatggat
     3721 tgtttatgcc tatgattttt atgtttttat taggtgcatt tacaaaatca gcacaatttc
     3781 catttcatat ttggctacct agagcaatgg ctgcacctac acctgtaagt gcttatttac
     3841 attcagccac gatggtaaaa gctggtatct ttttattact tcgatttaca ccattattag
     3901 gtcttagcaa tatgtacata tatatcgtaa cctttgtcgg gttaataact atgttatttg
     3961 gctcaatcac agctttaaaa caatgggatt taaagggaat tctagcgtat tcaacaatca
     4021 gtcaactagg aatgattatg gcaatggtcg gtatcggtgg tggatatgct caacacctac
     4081 aagacgcaat agcatctatt tatgtattcg tgttatttgc agcattgttc catctaatga
     4141 atcatgccat ctttaaatgt gcgcttttca tgggagtagg tattttagat catgaagcag
     4201 gttcaaggga catacgaatt ttaagtggaa tgcgtcaact atttcctaaa atgaatctag
     4261 tcatgacgat agcggctcta tctatggctg gagtaccatt tttaaatgga tttttaagta
     4321 aagaaatgtt cttagatgca ttaacacaaa ctggacaatt atcccaattt agtttgattt
     4381 caatgatagc tatcgtgttt gttggtgtta ttgcgagtgt ttttacattc acatatgcac
     4441 tatacatggt aaaagaggta ttttggacaa aatatgattc taaggttttt actaaaaaaa
     4501 atatccacga accatggttg tttagtttac catctcttat attaatggtg ctagtacctg
     4561 taatcttttt tgtaccaaat atatttggga agtggattat cgttccagca ttaagagctg
     4621 tatcagctgg taatcatcaa attgatcaat tggcaccaca tgtttcgcaa tggcatggat
     4681 ttaacatacc gcttctttta accatcatca ttattttatt gggtagtgta ctagcaatca
     4741 aagtagattg gaaaaaagtg ttcacgggta aaatcagaca gatttcagtt tcaaaaagct
     4801 atgagatgat atatagacat tttgaaaagt ttgctacgaa gcgatttaaa cgtgttatgc
     4861 aagatcgttt aaaccaatac attattatga cactgggcat atttatggta atcatcggat
     4921 acggttatat tcgaattgga cttcctaaag tacatcagtt acatgtttct gaatttgggg
     4981 cattagaaat tatattagca atcgtaactg tcacaattgg tatttcttta atttttatac
     5041 gtcaacgact aaccatggta attttaaatg gagtcatcgg ttttgttgtg accttattct
     5101 ttatagcaat gaaagcccct gatttagcat tgactcagct agtagttgaa acaataacga
     5161 cgatactatt tattgtcagt ttttcaagat taccaaacgt gccaagatct aacgctaaca
     5221 aaaaaagaga aataattaaa atttctgtat cactcttgat ggcacttatt gttgtatcat
     5281 taatttttat tacacaacaa acagatggtt tatcatcaat atcagacttc tatttaaaag
     5341 ctgacaaact aacaggtggt aaaaatattg taaatgcgat acttggtgac tttagagcat
     5401 tagatacatt atttgaagga ttagtgttaa ttattactgg gctaggtatt tacacattac
     5461 taaattatca agatcggagg ggacaagatg aaagagaatg atgtcgtgtt aagaacggtc
     5521 acgaaacttg ttgtatttat attattgact ttcggattct atgtcttctt cgcaggtcat
     5581 aataatcctg gtggtggctt tattggtggt ttaatattta gttcagcgtt tattttaatg
     5641 tttctggctt ttaatgttga agaggtttta gaaagtttac cgattgattt tagaatttta
     5701 atgattattg gagcattggt atcatctatt actgcgataa tacctatgtt ttttggaaaa
     5761 ccatttttgt ctcaatatga aacaacttgg atacttccaa ttttagggca aattcatgta
     5821 agtacaataa cactttttga attaggtatt ttattttcag ttgttggtgt tattgtcaca
     5881 gtgatgttgt cgcttagcgg aggtcgatca tgaatttaat attattacta gttataggat
     5941 ttttagtatt tataggaaca tatatgattt tatcaatcaa tttaattcgt attgtaatcg
     6001 gaatttcaat atatactcat gccggtaatc tcattatcat gagtatggga acgtatggtt
     6061 ctagtagatc agaaccatta ataactggtg gaaaccaatt gtttgttgat cccttgttac
     6121 aagctattgt actaactgca atagttatag ggtttgggat gactgcgttt ttacttgtac
     6181 ttgtttatag aacttataaa gtaacaaaag aagatgaaat cgaaggccta aggggggaag
     6241 atgatgctaa gtaacttatt gattttacca atgttattac cattcctttg tgccttaatc
     6301 cttgtatttt taaaaaataa tgaccgtatt tctaaatatt tatacttagg tacaatgact
     6361 atcaccacaa ttatttcatt aatgctatta atttatgttc agcgtcaccg tccaattacg
     6421 ctagactttg gaggatggtc agcgcccttt ggtatacagt ttttaggaga ttctttaagt
     6481 ttaattatgg ttacaaccgc ttcgtttgtg attactttaa ttatggcata cggatttggg
     6541 cgtggcgaac ataaagcaaa tcgttatcac ttgccatcgt tcatattatt tttaagcgtt
     6601 ggcgtgatag gctcttttct aacatcagat ttatttaatt tatacgtcat gtttgaaatt
     6661 atgttacttg cgtcatttgt actcattaca cttggacaat ctgtagaaca attacgtgct
     6721 gcaattattt atgttgtctt gaatattatt ggttcatggc tattcttatt aggtataggt
     6781 ttactttata aaacagtagg tacattaaac ttttcacata ttgcaatgcg tttgaatgat
     6841 atgggagata atcgcactgt aacaatgatt tcattaatct tcttagtcgc atttagtgct
     6901 aaagcagcgc tggtcctttt tatgtggcta cctaaagcat acgcagtgtt aaatactgag
     6961 cttgcagcat tatttgcagc gttaatgacc aaagtagggg cctatgcatt aattcgattc
     7021 ttcactctac tatttgatca acataatgat ctcatacatc cattgctagc aactatggct
     7081 gctataacta tggtcatcgg cgctataggt gtcattgctt ataaagatat taaaaagatt
     7141 gcagcttacc aagtcataat atcaatagga tttatcattt taggtttggg aacaaacacg
     7201 tttgcaggta ttaatggtgc aatattttat ttagtaaatg atattgttgt aaaaacattg
     7261 ctattcttta ttattggtag tttagtttac attacaggct atcgacaata tcaatatttg
     7321 aatggcttag ctaaaaaaga acctttattt ggagttgcgt ttattataat gatttttgct
     7381 attggcggcg tgcccccatt tagtggcttt ccggggaaag tacttatttt ccaaggtgca
     7441 ttgcaaaatg gcaattatat tggactagcg ttaatgatta ttactagtct aattgcaatg
     7501 tacagtttat ttaggatact tttttatatg tattttggag ataaagatgg ggaggaagtt
     7561 aattttaaga aaatcccact atatcgaaaa agaattttaa gtattttagt agttgtggtt
     7621 atcgcaatcg gaattgctgc gcctgttgtg ttaaatgtta caagtgatgc aactgagttg
     7681 aacacgagtg atcaattata tcaaaaactt gtaaatccgc atttgaaagg agaggactaa
     7741 atgaatcaaa tagttttaaa tattatcatt gcattcttat gggtattatt tcaagatgaa
     7801 gatcatttta aattctcgac tttcttttct ggatatctaa ttggtttaat tgtcatttat
     7861 atattacaca ggtttttcag cgatgatttt tatgttagaa aaatttgggt agctattaaa
     7921 tttttaggtg tttatttata tcaattaata acatctagca ttagcacgat taattatatt
     7981 ctttttaaaa caaaagatat gaaccctgga ttactttcat atgaaacaag actaactagt
     8041 gactgggcaa taacattttt aacaatttta attattataa ctccagggtc tacagtaata
     8101 cgaatttctc aagactctaa aaagtttttt attcatagta tcgacgtgtc agaaaaagaa
     8161 aaagatagtt tgttaagaag tattaagcat tatgaagact taatattgga ggtgtcgcga
     8221 tgatacaaac aataacacat attatgatta ttagttcact cattattttt ggaattgcat
     8281 taatcatctg tttatttaga ttaatcaagg gacctacaac agcagatcgt gtcgttacat
     8341 ttgatacaac aagtgctgtc gtaatgtcaa ttgtgggtgt gttaagtgta cttatgggca
     8401 ccgtttcttt cttagattca atcatgctca ttgccattat atcttttgta agttctgttt
     8461 caatatcgcg ctttattggt ggggggcatg tgtttaatgg aaataacaaa agaaatcttt
     8521 agtcttattg ctgctgtgat gttgttgtta ggtagtttta ttgctcttat tagtgcaata
     8581 ggtatcgtga aattccaaga tgttttctta agaagtcatg ctgcaacaaa aagttcgact
     8641 ttatccgtgt tattaacttt aatcggtgta ttaatttatt ttattgtgaa tacaggattt
     8701 ttcagtgtgc gtttattact atcacttgtt tttattaatt taacttcacc cgtcggcatg
     8761 cacttagtcg ctcgcgctgc ttatcgcaac ggcgcttata tgtatcgaaa aaatgatgat
     8821 cacacacatg catcaatatt attaagttca aatgaacaaa actctacaga agcattacaa
     8881 ttacgtgcta aaaaacgaga agagcatcgt aagaaatggt atcaaaacga ttgaattgtt
     8941 ggctaaattg ttaagcataa caatgctttt gaagatttgt tttcaaaatt aatcattaaa
     9001 tgagtacttt gaaattggct agtcgatttt aaggtgctca ttttttgtat tataagttaa
     9061 tgttgttatg tgaaagcaag ttgtttattt atacaaacaa ttagtgataa aataaaatta
     9121 aataattgca aatttaagta ctgcaatcgt agacatatat ctatattaaa gtgcttttgt
     9181 ggtcgctaac tcaatttatc ctctaaagta taattacaac gagatgtgat acttaatttt
     9241 caattaaaca atacttttta gagaggtgaa agtttggaaa tatttgaaac aattcttata
     9301 tttatagctg ttgtgatact aagttcgttt gtccatactt tcatacctaa agtaccccta
     9361 gcatttatac aaattttctt gggcatgtta ctatttatta ccccaatccc tgttcaattt
     9421 aattttgatt ctgaattgtt tatggtaaca atgattgcgc ctttgttatt tgtagaaggt
     9481 gttaatgttt ctagagtcca tttaaggaaa tatattaagc cagtgatgat gatggcatta
     9541 ggattagtta ttactactgt gataggtgta ggtttattta ttcattggat ttggccagat
     9601 ttacctattg gagcagcatt tgcaattgct gccattcttt gtcctactga tgcagtagca
     9661 gtgcaagcaa tcactaaagg aaaggtcttg ccaaaaggag caatgacaat tcttgaaggt
     9721 gagtcattat tgaatgatgc tgctggtatt atttcattta aaatagctgt tggagtatta
     9781 gttacaggtg ctttttcact tgttgatgct gttcagttgt ttttaattgc atcaattggt
     9841 ggcgcagtgg ttggtttact tataggtatg gcattagtaa ggttccgatt aacattgatg
     9901 cgtcgaggat atgaaaacat taatatgttt acaattattc aattgttaac accatttgtt
     9961 acgtatttaa ttgctgaatt gtttcacgca tcaggaatca ttgcggcagt agttgcagga
    10021 cttgtacatg gtttcgaacg tgacagaatt atgcaagtac gtacacaact acaaatgagt
    10081 tacaatcata catggaatat actaggttat gttttaaatg gctttgtttt ttcaatatta
    10141 ggatttttag tacctgaagt tattattaaa attatcaaaa cagaaccgca caatttaatc
    10201 tttttaatag gcatcactat tgttgttgct ttagctgtct atctatttag atttgtttgg
    10261 gtttatgtct tatatcctta tttttattta gccatcagtc cattccaaaa aatgatgact
    10321 aaaaatgatg atgataatcc aacaactgag aaaccaccaa agcgaagttt atacgcttta
    10381 attatgacgt tatgtggtgt gcatggaaca atttctttag caatcgcatt aacgttaccg
    10441 tattttttag caggtcatca tgcttttacg tatagaaacg acttattatt tattgcatct
    10501 ggtatggtta ttattagttt ggtagttgca caagtattat tgccattatt aacgaaacct
    10561 gcacctaaaa cagtaattgg caatatgtcg tttaaagttg ctagaattta tatattagaa
    10621 caagttattg attatctaaa tcaaaaatct actttcgaaa caagttttaa atatggtaac
    10681 gtgattaaag aatatcatga taaattagca tttttaaaaa ctgtagagaa agatgatgaa
    10741 aactctaaag aattagaacg tctacaaaaa attgctttta atgtagaaac aaaaacatta
    10801 gagtctttag tagatgaagg acaaataacg aatagtgtac ttgaaaacta tatgcgttat
    10861 gctgaaagaa cacaggtata tagacaagca tcattaataa gaagaatgat tgtattatta
    10921 cgaggtgctt tattaaaacg aagagtacaa acgagagtga actcggcatc ttcacttagt
    10981 gttacggata acttaatgga attaaataaa attaataaat tagtccatta taatgtggtt
    11041 agtcgtttgt ctaaggaaac aacaaaagat aatacacttg aagttggaat ggtttgtgac
    11101 ggttatttaa tgcgaattga aaacttaaca ccgtctaatt tcttcaactc agcaagtgaa
    11161 gatacgatta ctaaaattaa attaaatgca ttgagagaac aacgtcgcat tttacgtgag
    11221 ttgattgata cagatgaagt atcagaaggt acagcgttaa aactaagaga agccatcaat
    11281 tatgatgaaa tggttattgt agatagtatg acgtagttcg taattatgct aaaagggatt
    11341 gatgaaaaac tgaatggctt ttcatcaatc ccttttattt taggggaatt gaatagatag
    11401 ttttaaacta tacgaattat taatatttga gatttaattg aaataagttt taaaaattgg
    11461 aggagataga ttaatcgaag tcatttaaag atgaagataa gtgcattcac aaaaaatagc
    11521 cacactcata tgacatcgga tgagtgtggc ttaaggatct atggggggag gaaaccatag
    11581 atgtttactt tgataggcca gattaaatat caaagtatgc gattatttat agcttgatgc
    11641 aaaagtggta tgcctattaa aagttactgc acatagcttt taatattccg ttcaaaggaa
    11701 aggggcatac aattgaacaa tctgtattag tacttttaac cagctatgct aaaagtctag
    11761 tagggagaac agttgtccaa tcacataaga acctctaact tcgttagtac gattaagaaa
    11821 agctttttag ttagtatgta atacaattta ttgacgcgcg tgaatctctt ttataagagt
    11881 gtgtagggaa tggcgttgta taaattgtat tagaagaact tctaacgcat ctctgtggtt
    11941 aaaagagatg aagggaacga cagtttaatt aaaaccacat aaagctttta actttgctct
    12001 ttgatttaaa gagtgataaa tgtttacagt ttaattaaaa ctgcataaga acttctagct
    12061 tttctctctc gctcaaagag aagttctaat accaccatat cgtgcgatcg ggaacggtat
    12121 atatattaat aggagggtaa tatatattta acgcacgata tgggactatt agccttcgac
    12181 tttgttatgt tgatgtgtgg cctaaaatat tggagatacc aatattttag gttgcatcaa
    12241 catcaattca tcttacttca ttaaaacaca gcgtgttatt tcatgcttcc gtgtacagtt
    12301 tcaatatttg atttcatcat tttgtagtaa gagtcacctt tagtgccttc tttaccgatt
    12361 gaatctgtgt acacttcacc aaagatatct ttcttcgttt cttcagataa actttccatt
    12421 gctttcttat caacacttgt ttctactaat aagtgtttta atttgtgctt tttaacaaac
    12481 tcaatagctt gtctcatttg ttcaggtgta ccttgttttt cagtgttaat ttcccaaata
    12541 taacctggtg taataccgta ttgttttgag aagtacttga aggcaccttc acttgtaatc
    12601 atggcacgtt gttcttttgg aatgtcatta aatttgtctt tactgtcatt atttaatttt
    12661 tccaattgag caatgtattt gttaccttgc ttttcataat ctgctttatg ttttttgtcg
    12721 ttatcgataa atgtttgttg aattgttttt acgtatttaa taccgttatc taaacttaac
    12781 catgcgtgtg gatcttgttt atctttgttg ccttcttcac cgtttaaata gataggttta
    12841 acatcttttg atactgcgat aactttttta tcttttaatg atttaccagc ctgttctaag
    12901 gctttttcaa accaaccgtt accagtctct aaatttaatc cgttgtataa aataacgtca
    12961 gcgtcagtta actttttaat atctttaggt ttaacttcat attcatgagg atcttgacca
    13021 acaggtacaa tactatgaat atcgacgttg tctccaccaa catttttagc catatcatat
    13081 aaaattgaat tcgtcgttac tacttttaat ttgccatttg acttatcact gctttgttta
    13141 ccaccagtac cacatgcagc aactagaagt aataaggcta ataataaagg tactaatttt
    13201 ttcatgttaa acttcctcgt ttctttctat tcgtaaattt tgtgaaaaat aatgtgatga
    13261 tataaattac aaacgtacaa agtacgattg tcgcaccact aggaatgttg taaatatagc
    13321 tgtaataaag tccgacaatt gaacttatga cacttattaa acttgctata atcatcattg
    13381 agtatagttt tttactaatt aaaaatgctg tagatgcagg tgtaattaat agtgcaacta
    13441 caagaataat acctaccgtt tgaatacttg ctactgttac taatgagagt aacaacatca
    13501 caaagtaatg taataacgtc gtatttagac cactcattct actaaacgtt ggatcgaatg
    13561 tagaaatcat taatggacga tagaaaataa tgattagaat aaggacgatt gaaccaatca
    13621 caatagtagt taaaaatgca ctatttgtga ttgccagtaa attaccaaac agaatatggt
    13681 acaaatctgt cgtagtgttt attaagctaa taataataat ccccgaagct aagaaagcgg
    13741 taaaactaat tccaatagcg gcgtcaggtt tcgttttact actagatgtg atataaccga
    13801 taaaaatact tgcgatcata ccagttataa gtgcgcctat aaacattgga ataccaaata
    13861 agaatgatag ggcaacacca ggtaatactg cgtgactcat tgcatctccc attaatgaaa
    13921 gaccacgtaa tacaattaaa ctaccaactg taccacaaac tatccctaca ataattgaag
    13981 ttatcaatgc tcgattcaag aattgatatg taaataaatg ttcgacaaac tctaacatgt
    14041 tatattgctc ctttgactag ggtcactaca gtcagtgcta ctcataaatg tttcgtttaa
    14101 gcgagtgaca ctcatagcct cttcactatc accaaagtat cgtaatgttt gatttaatag
    14161 aataatgcga tcaaagtatt gctttgcttt tgataaatca tggtggatga taagaataag
    14221 ttttccttgt tgttttaagt tctcgatttt tgtcatgatt aatttttcgc tactaaaatc
    14281 aattccgaca aacggctcat ctagaaaata aacttcactt tcggacatca atgctcttgc
    14341 tactagcaca cgttgtaatt gtccaccact taattctgaa atttgtcgat gacgtaaaga
    14401 ttctaattct aaatcgctta ataactgttt gagtttatcc cttgctgatt tattaggtcg
    14461 tctaaaccat ccaatttctt tgtagcaacc tgataaaatc acttgttcca cacttatagg
    14521 aaaatctaaa tcaatatgtg ctttttgtgg aatatatgta atatgttgca gttgttgttg
    14581 tataggtttg ttatataata atttagtacc ggtagcatta aattcaccaa ttaaagactt
    14641 gataagggaa gatttaccag caccattcgg gcccatgata ccaattattt cgccgcgtac
    14701 tggtatcgat aaggaaatgt ttttaagtac atgcttatta cctaaaaaca gatttaaatc
    14761 ttttgtttct aacaaacgtt tatacctcct aattaaaagt ttaggctaac ctaattaatt
    14821 gtataataaa ctgagaatat ttatcatgtc aagtaaattc gtgatataat atagacaatg
    14881 tatgtgaggt gaaagtatgt taactgaaga aaaagaagac tatttaaagg caatccttac
    14941 gaataatggc gataaaaact ttgtaacaaa taaaatctta tctcaatttt taaatattaa
    15001 gcctccatct gtaagtgaaa tggtaggacg tctcgaaaaa gcaggctatg ttgaaacaaa
    15061 accgtacaaa ggtgttagat taacagagga tggtttaacg catacgcttg atattattaa
    15121 gagacatcga ctattagaat tatttttaat agaaatattg aaatataatt gggaagaagt
    15181 acatcaagaa gcagaaattt tagaacatcg aatttcagat ttatttgttg aaaggctgga
    15241 tagcttgtta aatttcccag aaacttgccc gcacggcggt gtgattccta gaaataatga
    15301 atataaagag aaatatataa caacgatatt gaattatgaa cctggcgata tcgttacaat
    15361 taaacgtgtg agagataaga ctgatttgct aatatatttg tctagtaaag atatctctat
    15421 tggtaatgaa gtggaaattg tatcgaaaga tgaaatgaat aaagttatta tcatcaaacg
    15481 taatgataat gtaattattg tcagttacga aaatgcaatg aacatgtttg ctgaaaaata
    15541 aaataaagaa gccataaaga tatccatgat tgtactgata aagacatatg gataattgct
    15601 ttaggcttct tttttattag ttaatttatc aagtgagtat atttgagtaa aatattcact
    15661 gcataaagat tgaagataat ccagattgta ctataaatga agataggtac atgactgagt
    15721 tctttaagtg cactaccatc ccactgtgga cttggacgct ggaaagtcaa tttagcaatc
    15781 gtccaactag attgtagaac ttcgcctaat aatacgccta aaatatattg ataactcatt
    15841 gtgacaagta gttgaatttc tcctatattt tcatctttta atataaaata caacatgata
    15901 gaaattaaag ttataacaac aatgggtgag ccttttctag atgttaatat taaaaaataa
    15961 ataaatatca ataaataggt aaatataaag aaactaggta tctgataatg gctcgacgct
    16021 aaacctatca ataacataat aggtggcata aaataaccac caatcgttgt aagccattgg
    16081 cctgctagat gtctagattg tgtaattgcg aatccttgtt gtaatgtctg ttgtcgctct
    16141 cgtggacttg ttacaatgac taaatctttt gcacggccac cagcgagttt attaaacagt
    16201 acatgaccaa attcatgtgt taaaacaggg atatagttta aaatgacatc taaatagttc
    16261 aaaacaggct tatgtctata ttgatgaata gcaatataac aagctgcaac aataacgata
    16321 atgtatatat taagttgaat tgtcgtatta aaaaagtttg ataaataatt cattgttaac
    16381 ctcatataag atagtaattt aaagtttgct tatcatttat tataaatgat attggcatca
    16441 atagcgttag actttagact taccttagtt aaactaattt taatttttga aaaggtgaat
    16501 atgtgttaaa ataaagcaaa atcatttcga tataaatagg atgaatataa atactgttaa
    16561 tattgattac actaacataa taatgaaata agataggaga ttcctgttat gactgttgaa
    16621 gaaagatcca atacagccaa agttgacatt ttaggggtcg actttgataa tacaacaatg
    16681 ttgcaaatgg ttgaaaatat taaaaccttt tttgcaaatc aatcaacgaa taatcttttt
    16741 atagtaacag ccaaccctga aatagtgaat tacgcgacga cacatcaagc gtatttagag
    16801 ttaataaatc aagcgagcta tattgttgct gatgggacag gagtagtcaa agcttcgcat
    16861 cgtttaaagc aacctctagc gcatcgtata cctggtattg agttgatgga tgaatgtttg
    16921 aaaattgctc atgtaaatca tcaaaaagta tttttgttag gggcaactaa tgaagttgta
    16981 gaagcggcac aatatgcatt gcaacaaaga tatccaaaca tatcgtttgc acatcatcac
    17041 ggttatattg atttacaaga tgagacggta gtgaaacgaa ttgaactgtt taaacctgat
    17101 tacatatttg taggtatggg attccctaaa caagaagaat ggattatgac acatgaaaat
    17161 caatttgaat ctacagtgat gatgggcgta ggtggttctc ttgaagtatt tgctggggct
    17221 aaaaagagag cgccttatat ctttagaaaa ttaaacattg aatggattta tagagcatta
    17281 atagattgga aacgtattgg tagattgaag agtattccta tatttatgta taaaatagcc
    17341 aaagcaaaaa gaaaaataaa aaaggcgaaa tagtcatgat gacaaaaata aaaccgagga
    17401 aatccttaaa tggagattct cggttttctc ggtttattta ataacgaagc gggactcatc
    17461 gagtttgttt ctaaattctt tttgttcggc tttggatttc tttttaaaat cgtttaggaa
    17521 agcttcatat ttaggtaata catcatcaag ttcaccgtaa tcttttaact ttccgccttc
    17581 aatccaagca atcttagtac aaaattgtct cacttggcct aagttatgac taacgaaaaa
    17641 gatggttttg ttttgctctt taaactcgta aattttatct aaacattttt gtgcaaaagt
    17701 ttggtcacct acagataaag cttcgtcaat gactaagata tctggattaa ctgtgatatt
    17761 aattgaaaaa ccaagttttg cacgcatacc acttgaatac tttttaactg gttgataaat
    17821 aaactcacca agttcactaa attcaataat cttaggtgtc atcgctttaa tttctttacg
    17881 cttaaagccc atacataaca ttttaaattc gatattttca atccctgtaa gttgtccgct
    17941 caagccagca ctaattgcga taacgctgac ttcaccatta cgatccactt ttccaacagt
    18001 aggcgacaaa gaaccgccaa tgatattact caacgttgat ttgccggaac cattgatgcc
    18061 aacaagccct atgacgtcac cttcatatgc ttttaaacta atgtcatcta aagcgaaaaa
    18121 tgttttgttt ttatgtttgg gaatgagcgc atctttcata cgttctttat ttgtacgata
    18181 aatacgatat tcttttgtta catttttaat gtttaccgaa acgttcattt gtagaccttc
    18241 cttattcaca tttatctaga ttataatata ctactcaaca gttgttaaat tttaaaacct
    18301 gttgtaaagt gtatagaa
//
LOCUS       DALMNS010000058        18144 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.058, whole genome shotgun sequence.
ACCESSION   DALMNS010000058 DALMNS010000000
VERSION     DALMNS010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 18144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18144
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.058"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(159..1130)
                     /gene="nrdF"
                     /locus_tag="O6Y56_001615"
     CDS             complement(159..1130)
                     /gene="nrdF"
                     /locus_tag="O6Y56_001615"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HDB5574869.1"
                     /translation="MIAVNWNTQEDMTNMFWRQNISQMWVETEFKVSKDIASWKTLSE
                     AEQDTFKKALAGLTGLDTHQADDGMPLVMLHTTDLRKKAVYSFMAMMEQIHAKSYSHI
                     FTTLLPSSETNYLLDEWVLEEPHLKYKSDKIVANYHKLWGKEASIYDQYMARVTSVFL
                     ETFLFFSGFYYPLYLAGQGKMTTSGEIIRKILLDESIHGVFTGLDAQHLRNELSESEK
                     QKADQEMYKLLNDLYLNEESYTKMLYDDLGITEDVLNYVKYNGNKALSNLGFEPYFEE
                     SEFNPIIENALDTTTKNHDFFSVKGDGYVLALNVEALQDDDFVFDNK"
     gene            complement(1248..3353)
                     /gene="nrdE"
                     /locus_tag="O6Y56_001616"
     CDS             complement(1248..3353)
                     /gene="nrdE"
                     /locus_tag="O6Y56_001616"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000855513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HDB5574870.1"
                     /translation="MKTMEEKKYNHIELNNEVTKRREDGFFSLEKDQEALVAYLEEVK
                     DKTIFFDTEIERLRYLVDNDFYFNVFDIYSEADLIEITDYAKSIPFNFASYMSASKFF
                     KDYALKTNDKSQYLEDYNQHVAIVALYLANGNKAQAKQFISAMVEQRYQPATPTFLNA
                     GRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIK
                     GVAKGVLPIAKSLEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRL
                     STISTGLIVPSKFFDLAKEGKDFYMFAPHTVKEEYGVTLDDIDLEKYYDDMVANPNVE
                     KKKKNAREMLNLIAQTQLQSGYPYLMFKDNANRVHPNSNIGQIKMSNLCTEIFQLQET
                     SIINDYGIEDEIKRDISCNLGSLNIVNVMESGKFRDSVHSGMDALTVVSDVANIQNAP
                     GVRKANSELHSVGLGVMNLHGYLAKNKIGYESEEAKDFANIFFMMMNFYSIERSMEIA
                     KERGIKYQDFEKSDYANGKYFEFYTTQEFEPQFEKVRELFDGMAIPTSEDWKKLQQDV
                     EQYGLYHAYRLAIAPTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPQTM
                     WYYKSAFNTDQMKLIDLIATIQTHIDQGISTILYVNSEISTRELARLYVYAHYKGLKS
                     LYYTRNKLLSVEECTSCSI"
     gene            complement(3316..3714)
                     /gene="nrdI"
                     /locus_tag="O6Y56_001617"
     CDS             complement(3316..3714)
                     /gene="nrdI"
                     /locus_tag="O6Y56_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HDB5574871.1"
                     /translation="MKIIYFSFTGNVRRFIKRTELENTLEITAENCMEPVHEPFIIVT
                     GTIGFGEVPEPVQSFLEVNHQYIRGVAASGNRNWGLNFAKAGRTISEEYNVPLLMKFE
                     LHGKNKDVIEFKNKVGNFNENHGREKVQSY"
     gene            4515..5381
                     /locus_tag="O6Y56_001618"
     CDS             4515..5381
                     /locus_tag="O6Y56_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001594836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDB5574872.1"
                     /translation="MNPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVA
                     MFIPLFFIYKYHQPMFGRLSSQPLLITRSTLGLIGVLLNIYAIDHMVLSDADSLMKLN
                     PFWTILLSIVFLHEKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAAS
                     AYTCVRALSTREAPYTIVFYFSLFSVIVLIPFTAYTYEPMSQMQILYLLGAGLAAAVG
                     QIGVTLAYSFAAAKDISIFTYASIIFTAILGFILFGESPDFYATLGYVVIIGASYYMF
                     EKARRDAKIIKK"
     gene            5401..5901
                     /gene="queF"
                     /locus_tag="O6Y56_001619"
     CDS             5401..5901
                     /gene="queF"
                     /locus_tag="O6Y56_001619"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDB5574873.1"
                     /translation="MAHGRQQDELQDITLLGNQDNTYNFDYRPDVLESFDNKHQGRDY
                     FVKFNCPEFTSLCPITGQPDFATIYISYIPNVKMVESKSLKLYLFSFRNHGDFHEDCM
                     NIIMNDLIELMDPHYIEVWGKFTPRGGISIDPYTNYGRPNSKYEKMAEHRLMNHDLYP
                     EKIDNR"
     gene            6241..7746
                     /locus_tag="O6Y56_001620"
     CDS             6241..7746
                     /locus_tag="O6Y56_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HDB5574874.1"
                     /translation="MTQQNSHGNQIQDIPQTGFFGHPRGLGVLFFVEFWERFSYYGMR
                     ALLIFYMYFAVTDNGLGIDKTTAMSIMSVYGSLIYMTSIPGGWIADRITGTRGATLLG
                     AVFIIIGHICLSLPFALIGLFTSMFFIIIGSGLMKPNISNIVGRLYPENDRRMDAGFV
                     IFYMSVNMGALLSPIILQHFVNVKNFHGGFLIAAVGMALGLVWYVLFNRKNLGSVGMK
                     PTNPLTPAEKKKYGLIIGSVVLAIVLIIVIGALTNSLSFNLVSNTVLVLGIALPIIYF
                     TLIIRSKDVTDTERSRVKAFIPLFILGMVFWAIQEQGSNVLNIYGIEHSDMKLNLFGW
                     KTNFGEAIFQSINPLFILLLAPIISLLWQKLGTKQPSLPVKFAIGTFLAGASYILIGI
                     VGYASGSSNFSVNWVILSYIICVIGELCLSPTGNSAAVKLAPKAFNAQMMSIWYLTNA
                     SAQAINGTLVKLIEPLGQTNYFIFLGVVAIIVTTIVLAFSPLIIKAMKGIR"
     gene            complement(7824..7925)
                     /locus_tag="O6Y56_001621"
     CDS             complement(7824..7925)
                     /locus_tag="O6Y56_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574875.1"
                     /translation="MVITDIDVYRVGRENIVIAVYNEHIKLLFILIS"
     gene            8018..8935
                     /locus_tag="O6Y56_001622"
     CDS             8018..8935
                     /locus_tag="O6Y56_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family lipid kinase"
                     /protein_id="HDB5574876.1"
                     /translation="MENKYTHGVLFYHEHSGLKNINQGIGEVTTALSSICKHLSIQLS
                     ENEGDIIKYCQEIKTKNYAKDVDILFILGGDGTVNELINGVMTHDLQLPIGILPGGTF
                     NDFTKTLNIAPNHKQASEQMISAQVGTYDVIKINNQYALNFVGLGLIVQNAENVQDGS
                     KDIFGKLSYIGSTVKTLLNPTQFNYQLSIDDKTYSGETTMILSANGPFIGGSRIPLTD
                     LSPQDGELNTFIFNEQSFSILNDIFKKRDSMNWNEITQGIEHIPGKKISLTTDPAMKV
                     DIDGEISLETPIDIEVIPNAIQLLTVNDL"
     gene            complement(9543..10085)
                     /locus_tag="O6Y56_001623"
     CDS             complement(9543..10085)
                     /locus_tag="O6Y56_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'(3')-deoxyribonucleotidase"
                     /protein_id="HDB5574877.1"
                     /translation="MTRKSIAIDMDEVLADTLGEIIDAVNFRADLGIKMEALNGQKLK
                     HVIPEHDGLITEVLREPGFFRHLKVMPHAQEVVKKLTEHYDVYIATAAMDVPTSFSDK
                     YEWLLEFFPFLDPQHFVFCGRKNIVKADYLIDDNPRQLEIFTGTPIMFTAVHNINDDR
                     FERVNSWKDVEQYFLDNIEK"
     gene            complement(10244..11302)
                     /gene="hisC"
                     /locus_tag="O6Y56_001624"
     CDS             complement(10244..11302)
                     /gene="hisC"
                     /locus_tag="O6Y56_001624"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDB5574878.1"
                     /translation="MKEQLNQLSAYQPGLSPRALKEKYGIEGDLYKLASNENLYGPSP
                     KVKEAISSHLDELYYYPETGSPTLKAAISKHLNVDQSRILFGAGLDEVILMISRAVLT
                     PGDTIVTSEATFGQYYHNAIVESANVIQVPLKDGGFDLEGILKEVNEDTSLVWLCNPN
                     NPTGTYFNHESLDSFLSQVPPHVPVIIDEAYFEFVTAEDYPDTLALQQKYDNAFLLRT
                     FSKAYGLAGLRVGYVVASEHAIEKWNIIRPPFNVTRISEYAAVAALEDQQYLKEVTHK
                     NSVERERFYQLPQSEHFLPSQTNFIFVKTKRVNELYEALLNVGCITRPFPTGVRITIG
                     FKEQNDKMLEVLSNFKYE"
     gene            complement(11542..13056)
                     /locus_tag="O6Y56_001625"
     CDS             complement(11542..13056)
                     /locus_tag="O6Y56_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease/substrate-binding
                     protein"
                     /protein_id="HDB5574879.1"
                     /translation="MTNFFDILSERKGQLFSTMIEHIQISFIALLIATAIAVPLGILL
                     TKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAIIALVVYALLPILRNTYT
                     GIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGVRTAMVLIIGTATLAALIG
                     AGGLGDLILLGIDRNNASLILLGAIPAALLAIIFDLILRLMAKLSYKKLLMTLGVIVM
                     IIILAIAIPMFAQKGDKITLAGKLGSEPSIITNMYKILIEEETKNTVEVKDGMGKTAF
                     LFNALKSDDIDGYLEFTGTVLGELTKEPLKSKEEKKVYEQAKQSLEKKYQMTMLKPMK
                     YNNTYALAVKRDFAKQHNIRTIGDLNKVKDQLKPGFTLEFNDRPDGYKAVQKAYNLNL
                     DNIRTMEPKLRYQAINKGNINLIDAYSTDAELKQYDMVVLKDDKHVFPPYQGAPLFKE
                     SFLKKHPEIKKPLNKLENKISDEDMQMMNYKVTVKNEDPYTVAKDYLKAKGLIK"
     gene            complement(13049..14026)
                     /locus_tag="O6Y56_001626"
     CDS             complement(13049..14026)
                     /locus_tag="O6Y56_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574880.1"
                     /translation="MIKFKNVTKRYGKHVAVDNISFNINEGEFFVLIGPSGCGKTTTL
                     KMINRLIHLSEGYIYFKDKPISDYPVYEMRWDIGYVLQQIALFPHMTIKENIAQVPQM
                     KKWKEKDIDKRVDELLEMVGLEPEKYKNRKPDELSGGQRQRVGVIRALAADPPVILMD
                     EPFSALDPISREKLQDDLIELQTKIKKTIIFVTHDIQEAMKLGDKICLLNEGHIEQID
                     TPEGFKNNPQSEFVKQFMGSHLEDDAPCVEENAIIRDLDIMKPIDEVTTMSAYPIVYD
                     NQQIEVLYQHLSESERVIVMQEDSVGQYVIDRKDIFKYLSQKKEVAQHD"
     gene            complement(14248..16029)
                     /gene="recQ"
                     /locus_tag="O6Y56_001627"
     CDS             complement(14248..16029)
                     /gene="recQ"
                     /locus_tag="O6Y56_001627"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HDB5574881.1"
                     /translation="MMQQTLSHYFGYETFRPGQEEIISKVLDHRNVLGVLPTGGGKSI
                     CYQVPGLLLGGTTIVISPLISLMKDQVDQLKAMGIQAAFLNSSLTQKEQQRIEKALSN
                     GEIQFLYVAPERFENRYFLNMLQRIKIHLVAFDEAHCISKWGHDFRPSYQNVISKVFT
                     LPQDFTIIALTATATVEVQQDIREKLNIAQTDQIKTSTKRRNLIFKVNPTYQRQKFVL
                     DYIKTHDEDAGIIYCSTRKQVEELQEALESQKIESVIYHAGLSNKEREEAQNDFLFDR
                     VKVVVATNAFGMGIDKSNVRFVIHYNMPGDLESYYQEAGRAGRDGLKSECILLFSERD
                     INLHEYFITVSQADDDYKDKMGEKLTKMIQYTKTKKCLEATIVHYFEPNEKLEECEQC
                     SNCVQQDKSYNMTQEAKMIISCIARMKQQESYSVIIQVLRGESTDYIKYKGYDQISTH
                     GLMKGYTTSELSHLIDELRFKGFLNENDEILMCDTSIKKLLSNEVEVFTTPFKQKATE
                     KVFINTVEGVDRVLFSQLVEVRKKLSDKLTIAPVSIFSDYTLEEFAKRKPASKQDMIN
                     IDGVGSYKLKHYCPAFLETIQNYKAKV"
     gene            complement(16041..17924)
                     /locus_tag="O6Y56_001628"
     CDS             complement(16041..17924)
                     /locus_tag="O6Y56_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDB5574882.1"
                     /translation="MGMEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGK
                     STLLKVIGGIDDDFTANVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQ
                     YEQAVQAYADDQSDKLFKRMMDAQEAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKEL
                     SGGQQKRVVLAKTLIEQPDLLLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYF
                     LNEVSTRIIELNRGKLASYPGNYESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAG
                     AKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQVFELEDLSKAINDKV
                     LFEHLTEIIQKGERIGVVGPNGAGKTTLLNVLSGEDQQFEGKLKTGQTVKVAYFKQTD
                     ETLDRDIRMIDYLREESEIAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKR
                     LYLLRLLVHQPNVLLLDEPTNDLDTETLTILEDYIHTFGGTVITVSHDRYFLNKVAQS
                     YWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLKQQSKSSTTVRKKNGLSYKEKLEYE
                     QLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIK
                     EQQ"
BASE COUNT         5705 a         3201 c         2598 g         6640 t
ORIGIN      
        1 ctgccaatat aaataacatt gtatatctta gaacattgat ttctgactca gtctcataat
       61 gatttaaata cacataaaaa aagaccttca acatgtagga gtcaagacga aacgaatcgc
      121 tatttccctt tacatgtgaa ggtcttttaa tttaattgtt atttgttgtc aaatacaaag
      181 tcatcatctt gtaatgcttc tacgtttaat gctaatacat aaccatcacc ttttactgag
      241 aagaagtcat ggtttttagt tgttgtatct aaggcattct caatgattgg gttaaattca
      301 ctttcctcaa aataaggttc aaagcctaag tttgaaagtg ctttgtttcc attatattta
      361 acatagttta gcacatcttc agtgattcca agatcatcgt ataacatttt tgtgtatgac
      421 tcttcattta aatacaagtc atttagcaat ttatacattt cttggtctgc tttttgtttc
      481 tcactttcag atagttcatt tcgtaaatgc tgtgcatcta aaccggtaaa tacaccatga
      541 atagattcat ctaaaagaat tttacgaatg atttcacctg atgtcgtcat ttttccttga
      601 ccagctagat atagtggata atagaaacct gagaagaata agaatgtttc taaaaataca
      661 ctcgtaactc tggccatata ttggtcgtat atcgaagctt ctttacccca aagtttgtga
      721 taattagcaa caattttatc agatttatat tttaaatgag gttcctctaa aacccattca
      781 tctaataagt agtttgtttc actagatggt aatagtgttg tgaaaatatg tgaatagctt
      841 ttcgcgtgta tttgctccat catcgccata aatgaataaa ctgctttttt ccttaagtca
      901 gtcgtatgta gcataactaa aggcatacca tcatctgctt gatgtgtatc taagcctgtt
      961 aaaccagcta atgctttttt aaatgtgtct tgttcagctt cagataaagt cttccaactt
     1021 gcaatgtctt ttgatacttt aaattctgtt tcaacccaca tttgagatat attttgtctc
     1081 caaaacatat tcgtcatatc ttcttgtgtg ttccaattaa cagctatcat gaatataatt
     1141 tcctcctgta atgttactca ataattgaca aatacagaca tagcagtcta atcatctgct
     1201 aattcagacc agatgattag ctgtttgtca ttttcaacat ttaattgtta gatagaacaa
     1261 cttgtacatt cttctacact taataattta tttctagtat agtaaagaga ttttaatcct
     1321 ttatagtgcg catatacata taatcttgct aactcacgtg tagaaatttc agaattaaca
     1381 taaagtatcg ttgagatacc ttggtcaata tgcgtttgaa ttgtcgctat taaatcgatt
     1441 aatttcatct gatcagtatt gaatgctgat ttgtagtacc acattgtttg tggtgataag
     1501 aatggcatag ggtaaaatgt ttccgcatta ccataagtac gacgttcaat ttggtcaacg
     1561 attggcatta cagagcttgt tgcattttga acataagaaa tactttgtgt tggagcaatt
     1621 gctaatctat atgcatgata taaaccatat tgttcaacat cttgttgtag tttcttccaa
     1681 tcctcagaag taggaatagc cataccgtcg aataattcac gtactttttc gaattgaggt
     1741 tcaaattctt gagttgtata gaactcgaaa tatttgccat tagcataatc agacttttca
     1801 aagtcttgat atttgatacc acgctcttta gcgatttcca ttgaacgttc gattgagtag
     1861 aaattcatca tcataaagaa gatatttgca aaatcttttg cttcttctga ctcataacca
     1921 attttatttt ttgctaggta accgtgtaaa ttcatcacac caagaccaac tgaatgtaat
     1981 tcactgttag cttttctaac tcctggtgca ttttgaatat ttgctacatc acttacaaca
     2041 gttaatgcgt ccataccaga gtgaactgaa tctctgaatt ttccgctttc cattacatta
     2101 acaatattta atgagcctaa gttacaagaa atatcacgtt tgatttcgtc ttcaatacca
     2161 tagtcgttaa taattgaagt ttcttgtagt tggaaaattt ccgtacataa gttactcatt
     2221 ttaatttgtc caatgtttga attcggatgc actctgttag cattatcttt aaacattaag
     2281 tatggataac ctgattgtaa ttgtgtttgc gcaattaaat tcaacatttc acgcgcattc
     2341 tttttctttt tctcaacatt tgggtttgca accatgtcat cataatattt ttctaaatcg
     2401 atatcgtcta atgtcacacc atattcttct ttaactgtat gaggtgcaaa catataaaag
     2461 tccttacctt ctttagctaa atcgaagaat ttagatggaa caattaaacc agttgatatt
     2521 gtagataaac gtaaatcttc atccgcattt acttttttag tatctaaaaa ttcttctaca
     2581 tcataatgga agatatttaa gtacactgca ccagcaccag ggcgttgacc aagttgatct
     2641 gcatagctaa agccaccttc aagtgactta gcaataggta aaacgccttt cgctacgcct
     2701 ttaattcctt taattgcttc accacgtgca cgcaatttag ataagttaat tgcaacgccg
     2761 cccccaattt tacttaattg ttttgcagtt gaatcaataa agttaattga atttaagctg
     2821 tcatccactt ctaataagaa acatgacact agctcaccac gacgcgcacg gcctgcgttt
     2881 aaaaatgttg gtgtcgctgg ttgatatctt tgttcaacca tagcagaaat aaattgttta
     2941 gcttgtgctt tattaccatt tgctaggtat aaagcaacaa tggcaacgtg ttgattatag
     3001 tcttctaaat attgactttt atcatttgtt ttcaaagcgt aatctttgaa aaatttacta
     3061 gctgacatat aacttgcaaa attaaacggg attgattttg cataatcagt gatttcaatt
     3121 aaatccgctt cactataaat atcaaacaca ttgaaataaa aatcgttgtc tactaaataa
     3181 cgcaaacgct cgatttcagt gtcgaagaag attgttttgt cttttacttc ttctaaataa
     3241 gctactaaag cttcttggtc tttttctaaa ctaaagaatc catcttctct tcgtttagtg
     3301 acctcattat ttaattcaat atgattgtac tttttctctt ccatggtttt cattaaaatt
     3361 acccaccttg ttcttaaatt caataacgtc tttgtttttt ccatgtaact caaacttcat
     3421 taataaaggg acattatact cttctgatat cgtgcgaccc gcttttgcga aatttagtcc
     3481 ccaatttcga ttaccgctag ctgccacacc tctgatgtat tgatgattaa cttctaaaaa
     3541 agattgaacg ggttctggta cttctccaaa tccaatagtg ccagtaacga taataaacgg
     3601 ttcatgaact ggttccatac aattttctgc tgtaatctca agcgtatttt caagttctgt
     3661 tctcttaata aaacgacgga catttccagt aaatgaaaaa tatattattt tcattggatc
     3721 accttctttc ttcaaccctt ttaaataaag tagtcattac aattaaaaaa tgctttaaca
     3781 acatggttac tatggttatc tcagcattgt attaactata atgaagctac ttattttctc
     3841 aaatgtaaac caattgcata gatttatatt tgagaaaata gtagcttata tgggttgaat
     3901 gtataaaaat cactatatgt agtgtttaca tcattggata tcttccattt gctcagtaca
     3961 ttttctaaaa atatgactat taattgataa taactattaa atttctgtgt taaattactt
     4021 ttaaatgtaa tttcttcata aataaagcat ttgcatacaa aacacaagat attgtgtctt
     4081 tttcgtttta ccaacactat attatgtgtt tcattataca taagacacac tatgatttaa
     4141 agtgccattt tctaatcgaa tgttcgtaaa acgttccaac taggcaccaa tactaaatta
     4201 gaaaaacttg aacaaatttt aaaaaaattt ttagtagata tcacttgatt tttttaaatc
     4261 tgtgtcaatc tcaattgtat caacagaaat caagaaaaag cttattagct tgatactgaa
     4321 ttgatatttg ttttatgtaa taacacaaac attcataaaa gtgtaatgcc ctattattcc
     4381 gacaaataaa cacagaacgt ttgttcggta aagtctatta tagtcttttt atagtaattt
     4441 tcaactattt atgcacaaca tgttgtttta tgctaatata aatacgttaa ttttatataa
     4501 aagaggcgat aaaattgaat cctaaagtaa aaggtatcat tgccatttta atttcggcta
     4561 ttggtttcag ttttatgtca gtgtttttca gacttgcagg tgaccttcct gtttttcaaa
     4621 aatcattagc acgaaactta gtagcaatgt ttattccatt attttttata tataaatacc
     4681 atcagccaat gtttggcaga ctttcaagtc aacccttatt aataacacga tcaacacttg
     4741 gacttattgg tgtattgtta aatatttatg ccattgatca tatggtgctt agtgatgccg
     4801 attcattaat gaaacttaat cctttctgga cgattttatt aagcattgtt ttcttacatg
     4861 aaaaggtaag gaagtatcaa ataacagcaa tgataattgc tattttaggt atgcttttaa
     4921 tagtgaaacc tgaattttca tcatctatga ttccatcatt agctggctta ttctcaggta
     4981 tttttgcagc atcagcatat acatgtgttc gagcacttag tacaagagaa gcaccatata
     5041 ctatagtatt ttacttctcc ttattttctg tcatcgtttt aatacctttc actgcatata
     5101 cttatgaacc aatgagtcag atgcaaatac tttatctatt aggggctggc ttagctgccg
     5161 ctgtgggtca aattggtgtt acattagcat atagttttgc agcagcaaaa gatatttcta
     5221 ttttcacgta tgcatctata attttcacag caatacttgg atttattcta ttcggagaat
     5281 ctccagattt ctatgcaaca ttaggttacg tcgttattat tggtgcaagt tattacatgt
     5341 ttgaaaaagc acgccgagac gccaaaataa taaaaaaata aatttaaagg agcgctttat
     5401 atggcacatg gccgtcaaca agatgaatta caagatataa ctttattagg aaatcaagac
     5461 aatacttaca attttgacta tcgtcccgat gtattagaat cgtttgataa taagcatcaa
     5521 ggtcgtgact atttcgtaaa attcaactgt ccagaattca catcattatg tccgattact
     5581 gggcaaccag attttgcaac tatctatatt tcatatattc caaacgttaa aatggtcgaa
     5641 tcaaaatctt tgaaattata cttatttagt ttcagaaatc acggtgattt ccacgaagat
     5701 tgtatgaata ttattatgaa tgatttgata gagcttatgg acccacatta tattgaagtc
     5761 tggggcaagt tcacaccacg tggtggaatt tctattgatc cttatacaaa ctatggacgt
     5821 ccaaattcta aatatgaaaa aatggctgag catcgtttaa tgaatcatga tttatatccc
     5881 gaaaaaatag ataatcgtta aatgaatcat ttaataaaca caccaataag ttgattttcc
     5941 taacttattg gtgtgttttt catttagcat acataatagg ttacattaaa ataacatttt
     6001 ataccaaagt acaccaaaag aatattagta cacgaattaa acaacatttt tatagaaacc
     6061 tattgcactt taacgtcaat aagtatattt ttatattatc tctaattaat tgtgcgcgct
     6121 taatagcaga atattctcaa tatttttatt tttttgtgat ttgtggaata tttagttgat
     6181 aaggcacaat caaatttact taaactattg tattagggga agaaaggatg ggatgtataa
     6241 atgacacaac aaaactccca tggaaatcaa attcaagaca tacctcaaac aggatttttc
     6301 gggcatcctc gaggactagg cgtactcttc tttgtagagt tctgggaaag gtttagttat
     6361 tatggcatgc gtgccctact cattttctac atgtactttg ccgtaacaga taatggcctt
     6421 ggaattgata aaacaacagc tatgtcaatt atgtcagttt atggttcatt aatctatatg
     6481 acatcaatac caggcggatg gattgctgac agaattacgg gcactagagg cgctacttta
     6541 ttaggtgccg tatttattat tatcggacat atttgtttaa gcttaccatt tgcattaatc
     6601 ggcttattca catcaatgtt cttcatcatt attggttcag gtttaatgaa gccaaacatt
     6661 tcaaatatcg ttggccgttt atatcctgaa aatgatagac gtatggatgc aggttttgtt
     6721 attttctata tgtcagttaa tatgggtgca ttattatcac ctattatttt gcaacacttt
     6781 gttaatgtta aaaacttcca cggcggattc ttgattgcag cagttggtat ggcattaggt
     6841 ttagtatggt atgtactttt caaccgcaaa aacttaggta gcgttggtat gaaacctact
     6901 aacccattga caccagctga aaagaaaaag tatggtctta ttatcggaag tgttgtctta
     6961 gcaattgtat taattatcgt tattggtgca ttaactaact cattatcatt taacttagtt
     7021 agtaatactg ttttagtatt aggtattgca ttaccaatca tttacttcac tttaattatt
     7081 agaagcaaag atgtcactga tactgaacgt tctcgtgtta aagcatttat tccattattt
     7141 attcttggaa tggtgttctg ggctattcaa gaacaagggt ctaatgtatt aaacatttat
     7201 ggaattgaac attcagatat gaaattaaac ctatttggtt ggaaaacaaa ctttggtgaa
     7261 gcgatcttcc aatcaattaa cccattattt attttattat tagctccaat tatttcactt
     7321 ttatggcaaa agcttggaac taaacaacct agcctgccag taaaatttgc aattggtacg
     7381 ttcttagcag gtgcgtcata catactaatt ggtattgtag gttatgcatc aggttcatca
     7441 aacttctcag ttaactgggt tattctatcg tacattattt gtgttatcgg tgagctttgc
     7501 ttatcaccaa cgggtaatag tgctgctgtt aagttagcac ctaaagcatt taatgcccaa
     7561 atgatgagta tttggtactt aactaacgct tctgcacaag caatcaatgg tactttagtt
     7621 aagttaatag aaccactagg tcaaacaaat tactttattt tcctaggtgt tgttgcaatt
     7681 attgttacaa caattgtatt agcattctca cctttaatca tcaaagcgat gaaaggtata
     7741 cgttaatatt gttggcctaa tttaaaaaac agtaagtcat ttaaatggct tactgttttt
     7801 ttataggttt ctattaatta aattcaagat atcagtataa ataaaagctt aatatgctcg
     7861 ttatagacag ctataactat attttctcgt cccactctat agacatcaat gtcagttatt
     7921 accattttct ctatttaaaa acatattttt ggtattaaca attaaaagtg ggtatatata
     7981 tatttaatga accaattttt agaaagtagg ctaaactatg gaaaataaat atacacatgg
     8041 tgtcctcttt taccatgaac atagtggatt aaaaaatatt aatcaaggta ttggggaagt
     8101 tacaacagca ttaagttcaa tttgtaagca tctttctatt caattgagtg aaaacgaagg
     8161 tgacattatt aaatattgcc aagaaatcaa aactaaaaac tatgcaaaag atgtagatat
     8221 attatttatt cttggcggtg atggcacggt taacgaactt ataaatggtg ttatgacaca
     8281 tgaccttcaa ctccctattg gcattttacc aggcggtact tttaatgatt ttacaaaaac
     8341 gctaaatata gcacctaatc ataaacaagc tagtgaacaa atgatttctg cacaagttgg
     8401 tacatacgat gtaattaaaa taaataatca atatgcactc aactttgttg gcttaggtct
     8461 aattgttcaa aacgctgaaa acgtacaaga tggttcaaaa gatatatttg gtaaattgag
     8521 ttatattgga tcaactgtca aaacactgct aaatccaaca caatttaatt atcaattatc
     8581 aattgatgat aagacatatt ctggcgaaac gaccatgata ctatcagcaa atggtccatt
     8641 tattggtggt agtcgtatac cattgactga tttgtctcct caagatggtg aactgaacac
     8701 tttcattttt aatgaacaaa gtttcagtat tttaaatgat atttttaaaa agcgtgatag
     8761 catgaattgg aatgaaatta ctcaaggtat tgagcatata cctggtaaaa agatttcact
     8821 tacaacagat ccagcaatga aagttgatat tgatggcgaa atttcattag aaacacctat
     8881 tgatattgag gttataccaa atgccattca gttacttact gtcaatgatt tgtaagcatc
     8941 cggaatgatc ttaacgggat attatattag gtttaaagtg taatcataag attcaacgta
     9001 cattatattc gttgttatta gctttaagct attaccctgt ttcaaaaaca gacatataat
     9061 tttggcgcat gccactaaaa tgattgatat tgtattttaa atcatagtgg tttatgcgtc
     9121 tttttcaaat tctataaaaa atcggatgac gtgtaatctg acatagatta acacattcat
     9181 ccgatttata ataatgagat agacttacat ttattgagag tgagacggaa atgataaaga
     9241 acgactaatg gttgattatg tagcgattct ttatcattag tcacagctaa tgtgtactta
     9301 aaaataggaa tgcatgagtg caactcatgc ataagaaata ctaatttcta aagaaaaagt
     9361 atttctttat gttggggccc accccaactc gcattgcctg tagaaattgg cgttccaatt
     9421 tctctgtgtt ggggccccac cccaactcgc attgtttgta gaatttcttt tcgaaattct
     9481 ctttgttggg gccccagtat atgattttat ttgctacatg aaatgcttca agtgatatat
     9541 ttttatttct caatattatc taaaaaatac tgttcaacat ctttccagct atttacgcgt
     9601 tcaaatcgat catcattaat attatgcact gctgtaaaca taatcggtgt accagtaaaa
     9661 atttcaagct gtctaggatt gtcatctatt aaataatcag ctttaacgat gttttttcta
     9721 ccacaaaaaa caaaatgctg aggatctaaa aatggaaaga actctagtaa ccattcatat
     9781 ttatcactaa atgatgttgg tacatccatt gctgctgtag caatatatac atcataatgt
     9841 tcagttaatt ttttcacaac ttcttgtgca tgcggcatca ctttaagatg tctgaagaag
     9901 cctggttctc tcaatacttc tgtaattaat ccatcatgtt cgggaataac atgtttaagt
     9961 ttttgaccat tcaaagcttc cattttaata cctaaatccg ctctaaaatt gacagcatca
    10021 atgatttctc ctaatgtatc tgccaatact tcatccatat caatcgcgat tgatttacgg
    10081 gtcattttaa tcttctcctc aaaatatcag tattgattca gtatagcaaa aaagcaattg
    10141 atacaaaaca atatcatcta ttgtcacatt ttaccactga atactctcgc ctcttaattc
    10201 acactgcatt ttagcacatt tttatacaat gtgacgacac ttactattcg tatttaaagt
    10261 ttgataaaac ttctaacatt ttatcatttt gttctttaaa accaattgta attctaacac
    10321 cggttggaaa tggtcgcgta atacacccta catttaaaag tgcttcataa agttcattta
    10381 cccgctttgt ttttacaaat ataaaattcg tttgacttgg taagaaatgc tcactttgag
    10441 gtaattgata aaatctttca cgttcaacac tatttttatg agttacctct tttaaatatt
    10501 gttgatcttc aagtgctgca actgctgcgt attcagatat acgtgtcaca ttaaatggtg
    10561 gtctaataat gttccatttt tcaattgcat gttcacttgc taccacatat cctacacgta
    10621 aacccgctaa tccatacgcc tttgaaaatg tacgtaataa gaatgcattg tcatattttt
    10681 gttgcaaagc aagtgtatcc gggtagtcct ctgctgtcac aaattcaaaa taagcttcat
    10741 ctataattac tggtacatgt ggaggtactt gagataaaaa cgaatctaag ctctcatgat
    10801 taaaatatgt acctgtagga ttatttggat tacataacca taccaatgac gtatcttcat
    10861 taacttcttt taaaatacct tctaaatcga agccaccatc ttttaaaggt acttgtatca
    10921 cattagctga ttcaacaatc gcattgtgat aatattgacc gaatgtcgct tcacttgtaa
    10981 caatagtatc ccctggcgtt aatactgctc tagaaatcat taatataact tcatctaatc
    11041 ccgcaccaaa taaaatgcgt gattgatcta catttaaatg tttactaatc gccgctttta
    11101 atgtcggtga tcctgtttca ggataataat ataactcatc taagtgtgat gatatcgctt
    11161 ctttaacttt aggcgatggt ccatacaaat tttcatttga tgcaagttta tataaatctc
    11221 cttcaatgcc atacttttct ttcaatgccc ttggagataa accaggctga tatgctgata
    11281 gttgattaag ttgttctttc ataataaaaa caacctcctt agaattaact gaaattttaa
    11341 aaaacttata ttcattatat cgctctatgt ttctaaaatg caatgctact attttcacat
    11401 cataataact tacattgtgt ttaacatgtc atatttttta atcattattg catgtttaaa
    11461 ttgaacataa ttatagattt aaatataaca acgccacata agatataatt tggtgttacg
    11521 catcttatgt ggcgttggtc gttatttgat taaccctttt gcttttaaat aatctttcgc
    11581 aactgtatat gggtcttcat ttttaactgt tactttatag ttcatcattt gcatatcttc
    11641 atcagatatt ttgttttcta gtttgtttaa cggtttctta atttctggat gtttctttaa
    11701 aaagctttct ttaaataatg gtgctccttg atatggtgga aatacgtgct tatcatcttt
    11761 taacacaacc atatcatatt gttttaattc agcgtcagtt gaatatgcat ctattaaatt
    11821 aatattacct ttattgatcg cttgatatct caacttaggt tccattgtac gtatgttatc
    11881 taaatttaaa ttataagcct tttgaacagc tttgtaacca tctggacgat cattaaattc
    11941 caaagtaaat cctggtttaa gttgatcttt aactttattt aaatcaccaa ttgtacgtat
    12001 attatgttgt ttagcaaaat cacgttttac agctaaagca tacgtattgt tatacttcat
    12061 tggttttaac attgtcattt gatatttctt ttcaagactt tgcttagctt gttcatatac
    12121 ttttttctct tcttttgact tcaatggttc ttttgttaat tcacctaaaa ctgttccagt
    12181 aaactctaaa tacccatcta tatcgtcaga ttttaaagca ttaaataaaa atgctgtttt
    12241 gcccatacca tctttcactt ctacagtatt tttggtctct tcttctatta aaattttata
    12301 catatttgta ataatcgaag gctcggagcc aagctttcca gctaacgtaa ttttatcacc
    12361 tttttgtgca aacataggaa tagcaatggc cagtataata atcatcacta taacacctaa
    12421 cgtcatcaat aactttttat aagataattt agccattaat cttaaaatta aatcaaatat
    12481 aattgccaat aaggctgctg gaattgcacc taataatatc aatgatgcat tgttacggtc
    12541 tatacctaat aaaattaaat ctcctagtcc gcctgcacca attaatgctg ctagtgttgc
    12601 tgtacctata attaatacca tagccgttct tacaccagcc attataacag gcattgctat
    12661 tggaagttca actttagtta aacgcctaaa tggcttcata cctatacctt tagccgcttc
    12721 aatgagtgat ggatcaactt ctttaattcc agtatacgta ttccttaaaa ttggtaacaa
    12781 cgcatacact acaagagcaa taattgctgg cacacgaccg ataccaaata aaggaatcat
    12841 taaacctaat aatgccaacg atggtatggt ttgaagaatt gccgcaatat tcattacgat
    12901 ttcagatatc gttttagtct tcgtcaataa aatacctaat ggtaccgcaa tagcagttgc
    12961 aatcaataat gcgataaatg atatttgaat atgttctatc attgtcgaaa atagttgccc
    13021 cttacgttca ctcaatatgt cgaaaaagtt agtcatgttg agctacctcc tttttctggg
    13081 acaaatattt gaagatatct ttcctatcaa taacatattg acctacgcta tcttcttgca
    13141 tgacaatgac acgctcgctc tctgataaat gttgatacaa tacttcaatt tgttgattgt
    13201 cataaacaat tggataagcg ctcatagttg taacctcatc gattggtttc ataatatcca
    13261 agtcacggat aattgcgttc tcttcaacac atggcgcatc atcttctaaa tgactaccca
    13321 taaattgttt aacaaattca ctttgaggat tatttttaaa tccttctggt gtgtcaattt
    13381 gttcaatatg accttcattc aaaagacaaa tcttatcacc aagtttcatc gcctcttgaa
    13441 tatcatgtgt aacaaatatg attgtcttct taattttagt ttgtaattca attaaatcat
    13501 cttgaagttt ttctcggctg attgggtcta atgcactaaa cggttcatcc attaaaataa
    13561 ctggtggatc agctgctaac gcacgtataa ctcctacacg ttgtcgttgt ccccctgaca
    13621 attcatcagg ttttctgttt ttatattttt caggttctaa tccaaccatt tcaagtaatt
    13681 catctactct tttatctata tctttttctt tccacttttt catttgtggc acttgtgcaa
    13741 tattttcttt aattgtcata tgtgggaata atgcaatctg ctgcaatacg tatccaatat
    13801 cccaacgcat ttcgtatact ggataatcac ttattggttt atctttaaaa taaatataac
    13861 cttcacttaa gtgaatgagt cgattaatca tttttaatgt cgtagttttt ccacaacctg
    13921 aaggtccaat tagtacaaaa aattcaccct cattaatatt gaaactaatg ttatcgacag
    13981 cgacatgttt gccataacgc ttagttacat ttttaaactt aatcactttg ccacctcttt
    14041 ttttctcata gcataaaacc gagattatat gtatgtattc cctatttaac cacgtttatt
    14101 acaattttca aatttaaatg atttatcctt gaactttttt aacaaaataa tgaataatag
    14161 gtaatctcca gttaagaaat agtgatattt taccttaaat tcaaaaaaac acccagtaaa
    14221 acaaggaatg cttactaggt gccttcacta tactttggct ttataatttt gaatcgtttc
    14281 taaaaatgct ggacaataat gttttaattt gtaactacct acgccatcaa tattaatcat
    14341 atcttgtttc gaagcaggct tacgtttagc aaattcctcc aacgtgtaat cagaaaatat
    14401 acttacaggt gctatcgtta atttgtcact taacttttta cgaacttcta ccaactgact
    14461 gaataatact cggtcaaccc cttcaaccgt atttataaat actttttcag tcgctttttg
    14521 cttaaatggt gttgtgaata cttctacttc attactgagt aattttttaa ttgaagtatc
    14581 acacattaat atttcatcat tttcatttaa gaaccctttg aatcttaatt catctattaa
    14641 gtgacttaat tctgatgttg tgtaaccttt cattaaacca tgggttgaaa tttgatcata
    14701 acctttatac ttaatataat ctgttgactc tcctcttagc acttgaatga taacactata
    14761 actctcttgt tgtttcatac gagcgatgca actaataatc atcttagctt cttgtgtcat
    14821 attatatgat ttatcttgtt gaacacaatt actacattgt tcacattctt ctaatttttc
    14881 attcggttca aaataatgga caattgttgc ttctaaacat ttttttgttt ttgtatattg
    14941 aatcatttta gttaactttt cgcccatttt atctttatag tcatcatcag cttgagagac
    15001 tgttataaaa tactcgtgta aattgatatc gcgttcacta aataacaaaa tacattcact
    15061 tttcaaccca tcacgacctg cacgacccgc ttcttgataa taagattcta aatctccagg
    15121 catattataa tgaataacaa aacgtacatt ggatttatca atacccatac caaaagcatt
    15181 tgtagcaacg actactttaa cacgatcaaa taagaagtca ttttgcgctt cttccctttc
    15241 tttattgctc aaacctgcat gatatataac actttcaatt ttctggcttt ctaaggcttc
    15301 ttgaagctct tcaacttgct tacgtgtaga acaataaata atacctgcat cttcatcgtg
    15361 tgttttaata taatctaata caaatttttg acgttggtaa gtaggattta ctttaaaaat
    15421 taagtttcta cgcttagtac tcgttttaat ttgatcagtt tgagcgatat ttaacttttc
    15481 tctaatatct tgctgtactt caaccgtggc agttgctgtc aacgctatta ttgtaaaatc
    15541 ttgaggtaac gtaaatactt tagaaatgac gttttgataa ctcggtctga aatcatgtcc
    15601 ccatttagat atacaatgcg cttcatcaaa cgcgactaag tgaatcttta tacgctgaag
    15661 catgtttaaa aaatatcggt tttcaaatcg ttctggtgca acatacaaaa attgaatttc
    15721 tccatttgat aatgcttttt caatacgttg ttgctctttt tgagtcaaac tactatttaa
    15781 aaaagcagcc tgaattccca tcgcttttaa ctgatccact tgatctttca ttaatgatat
    15841 aagtggactt attacaattg ttgtaccacc taacaataaa cctggtactt gatagcatat
    15901 agacttacct ccaccagttg gtaagacacc aagcacatta cgatggtcta atactttgct
    15961 aataatttct tcttgtcctg gtcgaaacgt ttcataccca aagtaatgcg ataatgtttg
    16021 ttgcatcata aattgacccc ttattgttgt tctttaattt cttctaactc actccatctt
    16081 gtgatgtcta aatcatattg aatttcaagt tgttcttttt cttcgtttaa ttctttaatt
    16141 ttcccataat ctgcacttgc ctcaatcatg agcacatcaa tttcttccat tcttacttcc
    16201 gcttgttcta tgcgtttcat caattgttca tattctaatt tttctttata tgataaccca
    16261 tttttcttac gtacagttgt agaagattta gattgttgct tcaatgtgga tttattttta
    16321 tctaatgatt ttttataact ttcataatct tcaaaagttc ctataatctt ttccatctga
    16381 ccatcatgaa taaaccaata tgactgtgca actttattta agaagtaacg atcatgactt
    16441 acggtaatca ctgtaccacc gaaagtatga atataatctt caagtattgt taaagtctca
    16501 gtatctaaat catttgtcgg ttcatctaac aacagaacat ttggctggtg tacgagtaga
    16561 cgtaataaat acaaacgctt ttgctctcca ccagataatt tataaacttt tttaccatga
    16621 gttgcacttg gaaataaaaa tcgttcaaga agttgtgtaa tagatactga tgttccatct
    16681 ttttcttttg cgatctcact ttcttctctt aaataatcaa tcatacgaat atctctatcc
    16741 agggtctcat ctgtttgctt aaaataagct actttaaccg tctgcccagt cttcaattta
    16801 ccttcgaatt gttggtcttc tccacttaaa acatttaaga gtgttgtttt accagctcca
    16861 tttggcccaa caacaccaat acgctcacct ttttgaataa tttccgtcag atgttcaaat
    16921 aatactttat cattaatagc ctttgataag tcttctaatt cgaacacttg cttacctaat
    16981 cttgaataag caagattcaa ttcaccttta tcgtctttat attgctggtt aacttcattt
    17041 tctaggtcat taaatcgatt aattctagct tgttgctttg tagtacgagc cttagctcca
    17101 gccctcatcc aagcaagttc ttccttatat aaagctcgtt gcttttgttg ttgcttttga
    17161 agtgttactt ctctttcagc gcgcatttca atataagatt catagttacc aggatatgac
    17221 gctagcttcc ctctgtttag ttcaataatt ctagtggaaa cttcatttaa aaaatatcga
    17281 tcatgggtta cgaataaaac tgtatgagga tattgcttca cataattgat caaccagctg
    17341 attgattcga agtctaaatg gttcgtaggt tcatctaata acaataaatc tggttgttct
    17401 attaatgttt tagcaagtac aacacgtttt tgttgtccgc cggataattc tttaatgtat
    17461 ttagtagtat catgtatacc tagttttgag aggattgttt taatttcagc gttatagtcc
    17521 caagcatcat gttgatccat agcttcttgc gcatccatca ttcgcttgaa caatttatca
    17581 ctttggtcat ccgcataagc ttgtactgcc tgctcatatt gcttgatgat gcgtaaagtt
    17641 gttgtatcag aacttaatac tgcatcaaaa actgtcatat cttcattcag gtcctgtttc
    17701 tgagacgaat atcgaattcg atattgattt ggatgcataa cattggctgt aaaatcatca
    17761 tcaataccac caattacttt taacaacgta cttttccctg taccatttat gcctaccaaa
    17821 cctatttttt caccttctga aattgataaa tctaggttat cgaatatagt cttatcggca
    17881 taagatttat ttaaatgttc aattttatat gcttccatac ccatcttcct tcttctgttg
    17941 aaatctctac gtacttaaat cagttctata cattatacac ctttttgaaa tcaaaagaaa
    18001 tcgataccgt taagtgtcat aatttaatat attgttgctt caactataaa taaaacttga
    18061 taaggctttg atgactatgc taatgatctt tataatatac ctttttatca acacatataa
    18121 tgtagaacat aataaaaaag aaca
//
LOCUS       DALMNS010000059        17939 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.059, whole genome shotgun sequence.
ACCESSION   DALMNS010000059 DALMNS010000000
VERSION     DALMNS010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 17939)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17939)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17939
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.059"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..90
                     /locus_tag="O6Y56_001629"
     CDS             <1..90
                     /locus_tag="O6Y56_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574883.1"
                     /translation="KYIVRYHLAFVFISSFSLNFSKQKYVTVN"
     gene            163..1152
                     /gene="ccpA"
                     /locus_tag="O6Y56_001630"
     CDS             163..1152
                     /gene="ccpA"
                     /locus_tag="O6Y56_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite control protein A"
                     /protein_id="HDB5574884.1"
                     /translation="MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRL
                     NYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDS
                     EKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
                     FTEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLAGLTEVLNKNGLQLGDTLNCSG
                     AESYKEGVKAFAKMKGNLPDAILCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRL
                     VEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPHRIEYRGTTK"
     gene            complement(1250..2419)
                     /locus_tag="O6Y56_001631"
     CDS             complement(1250..2419)
                     /locus_tag="O6Y56_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoin utilization protein AcuC"
                     /protein_id="HDB5574885.1"
                     /translation="MQQHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANL
                     LSPEQIVQPRIATDDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKHM
                     HRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLA
                     KEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGY
                     GHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTL
                     HSLYEIPYFVKYLADTYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLP
                     LEWINKWKHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIASWYESTRQ"
     gene            complement(2444..3076)
                     /locus_tag="O6Y56_001632"
     CDS             complement(2444..3076)
                     /locus_tag="O6Y56_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5574886.1"
                     /translation="MNHLKTYQSEDYYIHDKQFVIEGPLTYEDLKALTFDAHLTAFRD
                     AEDQYEALLEITTLPEGRIYVARQDQLIVGYVTFHYPDEIERWSTGNLPYLIELGAIE
                     VSINFRQLQLAEKLIQLSLSPPEFEDYIVITTEYYWHWDLKNSKLDVFDYKKLMQRLM
                     ATGGLEIFATDDPEITSHPANCLMARIGKNITLEQQQAFDDIRYMNRFFF"
     gene            3245..4951
                     /gene="acsA"
                     /locus_tag="O6Y56_001633"
     CDS             3245..4951
                     /gene="acsA"
                     /locus_tag="O6Y56_001633"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HDB5574887.1"
                     /translation="MKVEVYKGAQGKHNLKDYEETYNTFDWKDVEQAFSWSETGKMNM
                     AYECIDRHVDQGSGDKIALNYKDEHRKESYTYKDMQRLSNKAANVLSEHAEVDKGDRV
                     FIFMSRTPELYFALLGVLKIGAIVGPLFEAFMEKAVADRLENSEAKVLITNKALLPRV
                     PVDKLPNLKKIVVVDEDVEDNYIDFISLMETASDEFDIEWLKSDDGLILHYTSGSTGQ
                     PKGVLHVQQAMLVHYISGKYVLDLQEDDVYWCTADPGWVTGTSYGIFAPWLNGATNCI
                     AGGRFSPEHWYSMIEDFKVTIWYTAPTALRMLMSAGDDIVEKYDLSSLRSILSVGEPL
                     NPEVIKWAKKVYGLTVLDTWWMTETGGHMIVNYPTMDVKLGSMGKPLPGIQAAIIDDA
                     GNELPPNRMGNLAIKKGWPSMMYRIWKNPEKYKSYFIGDWYVSGDSAYKDEDGYFWFQ
                     GRVDDVIMTAGERVGPFEVESKLVEHEAVAEAGIIGKPDPVRGEIIKAFVALRKGYEP
                     TDELKEEIRLFVKEGLSAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELNLDAGDLST
                     ME"
     gene            5391..7058
                     /locus_tag="O6Y56_001634"
     CDS             5391..7058
                     /locus_tag="O6Y56_001634"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HDB5574888.1"
                     /translation="MTHLSDLDIANQSTLQPIKDIAASVGISEDALEPYGHYKAKIDI
                     NKITPRDSKGKVVLVTAMSPTPAGEGKSTVTVGLADAFHELKKNVMVALREPALGPTF
                     GIKGGATGGGYAQVLPMEDINLHFNGDFHAITTANNALSAFIDNHIHQGNELGIDQRR
                     IEWKRVLDMNDRALRHVNVGLGGPTNGVPREDGFNITVASEIMAILCLSRSIKDLKDK
                     ISRITIGYTRDRKPVTVADLKVQGALAMILKDAIKPNLVQSIEGTPALVHGGPFANIA
                     HGCNSILATETARDLADIVVTEAGFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRAL
                     KMHGGVAKDNLKEENVEAVKAGIVNLERHVNNIKKFGVEPVVAINAFIHDTDAEVEYV
                     KSWAKENNVRIALTEVWEKGGKGGVDLANEVLEVIDQPNSFKPLYELELPLEQKIEKI
                     VTEIYGGSKVTFSSKAQKQLKQFKENGWDNYPVCMAKTQYSFSDDQTLLGAPSGFEIT
                     IRELEAKTGAGFIVALTGAIMTMPGLPKKPAALNMDVTDDGHAIGLF"
     gene            complement(7304..7393)
                     /locus_tag="O6Y56_001635"
     CDS             complement(7304..7393)
                     /locus_tag="O6Y56_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574889.1"
                     /translation="MLLTTPIRLYLIDNNYQYQLLVLIVAHPN"
     gene            7392..10079
                     /gene="harA"
                     /locus_tag="O6Y56_001636"
     CDS             7392..10079
                     /gene="harA"
                     /locus_tag="O6Y56_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001032785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haptoglobin-binding heme uptake protein HarA"
                     /protein_id="HDB5574890.1"
                     /translation="MNKHHPKLRSFYSIRKSTLGVASVIVSTLFLITSQHQAQAAENT
                     NTSDKISENQNNNATTTQPPKDTNQTQPATQPANTAKTYPVADESLKDAIKDPALENK
                     EHDIGPREQVNFQLLDKNNETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFE
                     VYENNQKLPVRLVSYSPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGAETNYDYTKLV
                     FAKPIYNDSSLVKSDTNDAVATNDQSSSDASNQTNTNISNQNTSTTNNTSDQPQTTTN
                     MSQPAQPKSSANADQASSQPAHETNSNGNTNDKTNESSNQSDVNQQYPPADESLQDAI
                     KNPAIIDKEHTADNWRPIDFQMKNDKGERQFYHYASTVEPATVIFTKTGPIIELGLKT
                     ASTWKKFEVYEGDKKLPVELVSYDSDKDYAYIRFPVSNGTREVKIVSSIEYGENIHED
                     YDYTLMVFAQPITNNPDDYVDEETYNLQKLLAPYHKAKTLERQVYELEKLQEKLPEKY
                     KAEYKKKLDQTRVELADQVKSAVTEFENVTPTNDQLTDLQEAHFVVFESEENSESVMD
                     GFVEHPFYTATLNGQKYVVMKTKDDSYWKDLIVEGKRVTTVSKDPKNNSRTLIFPYMP
                     DKAVYNAIVKVVVANIGYEGQYHVRIINQDIKTKDEDTSQNNTSEPLNVQTGQEDKVS
                     DTDIAENSSTATNPKDASDKADVIEPESDMVKDADNNIDKDVQHDVDHLSDMSDNNHF
                     DKYDLKEMDTQIAKDTDKGVDNSVGMSSNVDTDKDSNKNKDKVIQMDHIADKNKVNNN
                     TGTETNIDTMQYHPISTIKVTDKKTTEHLPSDIHKTVDKTVKAKEKAGTPSKENKLSQ
                     SKMLPKTGETTSSQSWWGLYALLGMLALFIPKFKKNLNN"
     gene            10209..10301
                     /locus_tag="O6Y56_001637"
     CDS             10209..10301
                     /locus_tag="O6Y56_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574891.1"
                     /translation="MKIILLLFLIFGCIVVVTLKSEHQLTLFSI"
     gene            complement(10281..11186)
                     /locus_tag="O6Y56_001638"
     CDS             complement(10281..11186)
                     /locus_tag="O6Y56_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HDB5574892.1"
                     /translation="MTNQDNNHQLNHRIYHFEKIYKAIKHVIVFIFMIFIAIVAIAVI
                     AMSLYFHHLTKTSDSLSDDALIKKVRQIPGDELLDHNNKNLLYEYNHSQNSLIIGPKT
                     SSPNVIKALTSSEDTLFYKHDGILPKAILRAMIQDIFNTDQSSGGSTITQQLVKNQVL
                     TNEKTYSRKANELRLAIRLEHLLSKDEIIYTYLNIVPFGRDYNGANISGIASASYSLF
                     GIPPKDLSIAQSAYLIGLLQSPYGYTPYEKDGTLKSDKDLKYSIQRQHYVLKRMLIED
                     QITEKEYNDALKYDIKSHLLNRKKR"
     gene            11567..12829
                     /locus_tag="O6Y56_001639"
     CDS             11567..12829
                     /locus_tag="O6Y56_001639"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDB5574893.1"
                     /translation="MTNVLIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTAD
                     SLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEG
                     ISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRLE
                     HGISYTEFTYTILQAIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYG
                     LTIPLVTKSDGKKFGKSESGAVWLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGK
                     EEIDRLEQSKNEAPHLREAQKTLAEEVTKFIHGEDALKDAIRISQALFSGDLKSLSAK
                     ELKDGFKDVPQVTLSNDTTNIVEVLIETGISPSKRQAREDVNNGAIYINGERQQDVNY
                     ALAPEDKIDGEFTIIRRGKKKYFMVNYQ"
     gene            complement(12923..14197)
                     /locus_tag="O6Y56_001640"
     CDS             complement(12923..14197)
                     /locus_tag="O6Y56_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HDB5574894.1"
                     /translation="MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALL
                     VLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSKKFGTVHEMIKSVSPTIVGVINM
                     QKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
                     QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSV
                     TSGIISASERTIDAETTGGNTKVSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAA
                     TQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIPEEEREQLHTDSEDG
                     IYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKE
                     VKVKLKQQKEQPKRQSRSERQSPGQGDRDFFR"
     gene            14369..14986
                     /locus_tag="O6Y56_001641"
     CDS             14369..14986
                     /locus_tag="O6Y56_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HDB5574895.1"
                     /translation="MYSVISKILNFILVKMSKSLYVIGKDNIPKDSKYVVTCTHESYN
                     EVIMLGMALYPNQIHYMAKKELFKNKWIGKFLTSLNAFPVDRENPGPSTLKRPINLLK
                     DNKTVGIFPTGSRTSQEGAPLKRGASTIAMLSKSPILPVAYVGPTKIHGLLTGQAYIN
                     IGKPIDINDLPKDLKRNERIDYITKEIETRTAKLQQELHEIVKSL"
     gene            15114..16580
                     /locus_tag="O6Y56_001642"
     CDS             15114..16580
                     /locus_tag="O6Y56_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIBC"
                     /protein_id="HDB5574896.1"
                     /translation="MYKFFQNLGRSLMLPVAILPAAAIIAGIGNTLNALHAAPKIAMF
                     FTTVGTTILEQLGILFAIGVAIGMAKKNDGAVALAAALGYFLVTVVLSPMKLAPLLGM
                     KASEINSAFEKMNNGNVFVGIVIGLIAAYAYNKFSETELPLALSFFSGKRLVPIMTAF
                     YCTFLVVILLFLWPLLYSWIVKFGESIVGLGSFGAFVYGVANRLLIPTGLHHALNSVF
                     WFDTIGINDIGKFQSGKDAIKGITGRYQAGFFPIMMFGIPAAALAMYHTAKTTQKKQV
                     YGWFLASSVAAFFVGVTEPIEFAFMFVAPILYVVHALLTGLSLFIAATFHWTAGFSFS
                     AGLIDYVLSLINPVSNHPLMLLVQGVVFFILYYVIFRVVIQVFNLNTIGRGENELVDP
                     TVVKDNIAPGENDIKQSKYHNHAIQILEGLGGQENIVNLTNCATRLRLELKDTSIIDQ
                     QKIKNAGAVGVTVNGKHSTQVIVGTHVQQIADEIEKHL"
     gene            16687..17817
                     /locus_tag="O6Y56_001643"
     CDS             16687..17817
                     /locus_tag="O6Y56_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDB5574897.1"
                     /translation="MKKILFDVDGVFLSEERCFDVSALTVYELLMDKCYLGLHSHIDW
                     ETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIE
                     AFMYQDEPVKLKLQNISTNLADRFNLNEQLPLQFLDNVKVGKNNIYAALEEFAITELH
                     VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEEVEKKIARTTFKTGYIYQEIILRPVD
                     EVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMY
                     PQARPLGKPNPFSYIAALYGNNRDKYESYINKQNNIVNKDDVFIVGDSLADLLSAQKI
                     GATFIGTLTGLKGKDAASELEAHHADYVINHLGELRGVLDNL"
     gene            complement(17778..17873)
                     /locus_tag="O6Y56_001644"
     CDS             complement(17778..17873)
                     /locus_tag="O6Y56_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574898.1"
                     /translation="MKPLVQLFTSSYAVKQQSNYKLSSTPLSSPK"
BASE COUNT         6255 a         2620 c         3311 g         5753 t
ORIGIN      
        1 aaatatatcg ttcgttatca tttagcgttt gtttttattt caagcttttc gctaaatttt
       61 tccaaacaaa aatatgttac tgtaaattaa aatatggtaa actatgaaaa tgaaatgaaa
      121 acatgttatt ataatgaata aaacgtttac aaggaggaaa ttatgacagt tactatatat
      181 gatgtagcaa gagaagcgcg tgtctctatg gccacagtgt cgcgtgttgt taatgggaac
      241 caaaatgtta aagcagaaac taaaaataaa gttaacgaag tcattaagcg tttgaattat
      301 cgtccaaatg ctgttgctag aggtttagct agtaaaaaga caacaacagt aggtgtgatc
      361 attccagata tatctaatat ctattattca caacttgctc gtggacttga agatattgca
      421 acaatgtata aataccactc aattatttca aattcagata acgattctga aaaggaaaaa
      481 gaaattttta ataacttatt aagtaaacaa gttgatggta ttattttcct tggtggtaca
      541 attactgaag aaatgaaaga attgataaat caatcatctg tacctgtagt agtatcagga
      601 acaaatggta aggatgcaca tatagcatct gttaatattg attttactga agctgcgaaa
      661 gaaattacgg gagaattaat tgaaaaaggc gctaaatcat ttgctttagt aggtggagaa
      721 cattctaaaa aagctcaaga agatgtttta gcaggtttaa ctgaagtgtt aaataaaaat
      781 ggtcttcaat taggtgatac attgaattgt tctggtgctg aaagttataa agaaggcgta
      841 aaagcttttg ccaaaatgaa aggtaatctt ccagatgcta tattatgtat cagtgacgaa
      901 gaagctattg gtatcatgca tagtgcaatg gatgctggta ttaaagttcc agaggaatta
      961 caaattatta gtttcaataa tacacgctta gttgagatgg ttagaccaca actttctagt
     1021 gttattcaac cattatatga tatcggtgca gtagggatgc gcttattaac aaaatatatg
     1081 aacgatgaaa agatagaaga accgaatgta gttttaccac acagaattga ataccgagga
     1141 actacaaaat aaattcacaa aattaggcat tcatctaacg actcgactta tacgggtgtt
     1201 ggaagaatgc cttttattta tcttttaaaa tcgttgcaga ttaggtgact tattgacgag
     1261 tagattcgta ccaactcgct atatgtaaag ctaatttttt atttttttca ctaatttctt
     1321 ttgtgcgggg aacataggta taatcattta aacgatcttc ccatctttta ggtaataatt
     1381 cagatgaata atgtttccat ttattaatcc attctaacgg taaataacca ctttgaattg
     1441 gttgatcaat taaacttaag aatacatgac tccatgcacg tggtacgact ctccaaatat
     1501 tgtagcctcc gccaccaaac ataattacct ttccattcgt ataagtatca gctaaatatt
     1561 ttacaaaata tggaatttca tataatgaat gtaacgtaca atttagatga gttagtggat
     1621 cacgataatg tatatcgaca ccatttacgc ttagaataat atcaggttta aaactcttta
     1681 cgacaggctc aactgttaat ttaaaacact ccaaaaatga tgcatcttct gtatacggtt
     1741 caagtgggac atttacagtg tgcccatagc cgatatcttc accgcgctca gtatagtgac
     1801 cagagcctgg gaaaagaaat tttccggttt catggataga ataagtagta acatggttat
     1861 cggcatagaa actccattgt gtaccatctc catgatgtgc atcggtatct atgattaaaa
     1921 cgcgttgatt gtattcttta gctaagtatt gtgcggtaat tgcaatatca ttgtatatac
     1981 aaaaaccact tgctcgacca ggttgagcgt gatgcaaacc accacctaag tgacaaccat
     2041 ttaatacttt gcctgacata ataagatctg ctaaagttaa agcgcctcca acaattgtgg
     2101 cactatggcg atgcatatgc ttaaattgac cattctcttc atcatttaat ccatatttct
     2161 tagcctcatc ttcactgata atgccatgtg aagcatgctt aatagcttcg acgtaatcat
     2221 atttatgaat taacattaat tcgtcatctg ttgcaattct aggttgtact atttgttctg
     2281 gagacaataa atttgcattc aaaagtagct ctgttgttaa ttttaaacgc atttgattga
     2341 agggatgttg gtcatgaaat cgatattgta ataacttatc tgaataaaca tatgcagttt
     2401 ttgatgaatg ttgttgcata taatccctcc gatattccaa aaattaaaag aaaaaccgat
     2461 tcatatatcg aatatcatca aacgcttgtt gctgttctaa tgtaatattt ttgccaattc
     2521 ttgccattaa acaattagct ggatgacttg ttatttctgg atcatctgta gcgaatattt
     2581 caagtccacc agttgccatt aatcgctgca ttaatttttt atagtcaaat acatctaact
     2641 ttgaattttt taaatcccaa tgccagtaat attctgtagt tataacgata taatcctcga
     2701 attctggtgg agaaaggcta agttgtatta gcttttctgc aagttgtaat tgcctaaaat
     2761 tgatgctgac ttcaattgcc cccaattcga ttaaatatgg aaggttacct gtagaccagc
     2821 gctcaatttc atcaggatag tggaaagtga cataccccac aatgagttga tcttggcgag
     2881 caacataaat tctaccttct ggtaatgttg taatttctaa caaagcttca tactgatctt
     2941 cagcatctct aaatgcggtt aaatgcgcat cgaaagtaag cgctttcaaa tcttcgtatg
     3001 ttaaaggacc ttcaataaca aattgcttgt catgaatgta ataatcttcg gattgatacg
     3061 tctttaaatg attcatattt tcaactcctc aatcgacgtc gtgattgtat taaattcatt
     3121 atatagaaaa tttacaataa ttaatactag aaaaaggata aaagtaaaaa ttttgaataa
     3181 ttagaaatgt tatgtataat attgagaaag aaagcgtttt cacataacaa agggggagtt
     3241 tcaaatgaaa gtcgaagttt ataaaggagc gcaaggcaaa cataacctta aagattatga
     3301 agaaacatat aatacttttg attggaaaga cgtagaacaa gcattttctt ggagtgaaac
     3361 tggaaaaatg aacatggcat atgaatgtat agatcgccat gtagatcaag gatcagggga
     3421 taaaatagcg ttaaattaca aagatgagca cagaaaagaa tcgtatactt ataaagatat
     3481 gcaacggtta tctaataaag cagcgaatgt tttgtctgaa catgcagaag ttgacaaagg
     3541 tgacagagta tttatattta tgtctcgtac acctgaacta tattttgcgt tgttaggtgt
     3601 tttaaaaatt ggtgcaattg ttgggccgtt atttgaagca tttatggaaa aggcggttgc
     3661 ggatagatta gagaacagtg aagctaaagt gttaattact aataaggcat tgttacctcg
     3721 agtacctgta gataaattac cgaacttgaa aaaaattgtt gtcgtagatg aggatgtaga
     3781 agacaattac atagacttca ttagtttgat ggaaactgct agcgatgaat ttgacattga
     3841 atggttaaag tcagatgatg gtttgatttt acattataca tcaggttcta ctgggcaacc
     3901 taaaggtgta ttgcatgttc aacaagcaat gttagtgcac tatatttctg gaaaatatgt
     3961 attagattta caagaagatg atgtttattg gtgtacagca gatccaggtt gggttacagg
     4021 aacatcttat ggtatttttg caccatggtt aaatggcgct acaaattgta tagctggtgg
     4081 tcgcttttca ccagaacact ggtatagtat gattgaagat tttaaagtga cgatttggta
     4141 tacggcacca acagctttaa gaatgttaat gagtgctggt gacgatattg ttgagaaata
     4201 tgacttgtca tcgttacgtt cgattctatc agtaggtgag cccttaaatc ctgaagttat
     4261 aaaatgggcg aaaaaagtat acggtttaac ggtgttagat acttggtgga tgacagaaac
     4321 aggtggacat atgattgtta attatccaac gatggacgtc aagcttggct caatgggcaa
     4381 accattacct ggtattcaag ctgcaattat cgatgatgca ggtaatgaat taccaccaaa
     4441 tcgaatgggc aaccttgcta taaaaaaagg ctggccatca atgatgtatc gtatctggaa
     4501 gaatccagaa aaatataagt catattttat tggagactgg tatgtatctg gtgattcggc
     4561 atataaagat gaagatggtt acttctggtt ccaaggacgt gttgatgatg taattatgac
     4621 agctggtgaa cgagttggac catttgaggt tgagtctaaa ttggttgaac acgaagcagt
     4681 tgccgaagca ggaattattg gtaaacctga tccggttcgc ggtgaaataa ttaaggcgtt
     4741 tgttgcactg agaaaaggat atgaaccaac agacgaatta aaagaagaaa ttcgtttatt
     4801 tgttaaagaa ggtttgtcgg cacatgcagc accacgtgaa atcgaattta aagataaatt
     4861 acctaaaaca cgctcaggta aaattatgag acgtgtatta aaagcttggg aattaaattt
     4921 agatgcaggg gatttaagta caatggaata atgacatgaa tgtttttgaa gatttctttc
     4981 taagaataaa gggagacaac atatttcatg ttaatgttta aatattagtt tactttatga
     5041 taagcaatat aaagagctgt taacttgtgt catattattt cgtagaaagc atttgaaaat
     5101 gatgacataa caataatggc atatctttat attgcttttt atttttaata tgacctttgg
     5161 aatatgacta ttttaaataa tagaaaaata tagttatcaa tagtatcaag cgctaaaagt
     5221 tgtataatac aaaactttaa taagtgaatt tattgcaaaa atgaaagcgc taacccgatt
     5281 tagtcgacaa gtttttaaca gttcgttatt atatgaatgt aagtaaaaat ttcttagcta
     5341 caacttacat atttaaaatg cataaaataa acaaaaaggg gcgaaaaaag ttgactcatt
     5401 tatcagattt agatattgcg aatcaatcaa cactacaacc aattaaggat attgctgcat
     5461 cggtaggcat ttcagaggat gcattagaac cttatggtca ttacaaagct aaaatcgaca
     5521 ttaataaaat tacgccaaga gatagcaaag ggaaagttgt tttagtaact gcaatgagtc
     5581 caacaccagc aggtgagggc aaatcaacag ttactgttgg tttagctgac gcatttcatg
     5641 agttgaagaa gaacgttatg gtagcgttac gtgaacctgc cttaggacca actttcggta
     5701 ttaaaggtgg cgcaactggt ggtggttatg cgcaagtctt acctatggaa gatatcaact
     5761 tacattttaa tggggatttc catgcgatta caactgctaa taatgcattg tctgcgttta
     5821 tagataatca tattcaccaa ggtaatgaat taggaatcga tcaaagacgt attgaatgga
     5881 aacgtgtatt agatatgaat gatcgtgcac ttagacatgt aaacgttggg ttaggtggac
     5941 ctacaaatgg tgtaccacgt gaagatggct ttaatattac agtagcgtct gaaattatgg
     6001 cgattttatg tttaagtaga agtattaaag acttaaaaga taaaattagt cgtattacta
     6061 ttggttacac tagagatcgc aagccagtta cagttgcaga tttaaaagtg caaggtgcac
     6121 ttgcaatgat tttaaaagat gcaattaaac caaacttagt acaatcaatt gaagggacac
     6181 cagcattagt tcatggtgga ccatttgcga atatcgcaca cggttgtaac tcaattttag
     6241 caactgaaac agcacgtgat ttagctgata tcgttgtaac ggaagctgga tttggttcag
     6301 acttaggcgc tgaaaaattc atggacatta aggcacgtga agctggattc gacccagcag
     6361 cagttgtagt tgtagcaacg attcgtgcat taaaaatgca tggtggtgta gcaaaagata
     6421 atttaaaaga agaaaatgta gaagcagtaa aagcaggaat tgttaattta gagcgtcatg
     6481 ttaataatat taaaaaattc ggtgtagaac cggttgttgc aattaatgca tttatacatg
     6541 ataccgatgc agaagtagaa tatgtaaaat cttgggctaa agaaaataac gtacgaattg
     6601 ccttaactga agtttgggaa aaaggtggta aaggtggcgt tgacttagca aatgaagtat
     6661 tagaagtcat tgatcaacct aattcattta aacctttata tgaattagaa ttaccattag
     6721 agcaaaagat tgaaaagatt gtgactgaaa tctatggcgg ttcaaaagta acgtttagca
     6781 gtaaagcgca aaaacaatta aaacaattta aagaaaatgg ttgggataat tacccagtat
     6841 gcatggcgaa aacacaatat tcattctcag atgatcaaac gttgttaggt gcaccatcag
     6901 gatttgaaat tacaattcgt gaattagaag cgaaaacagg tgcaggattt atcgtagcat
     6961 tgacaggtgc aatcatgact atgcctggtt tacctaaaaa accagcagca ttaaacatgg
     7021 atgttactga tgatggtcat gcaattgggc tattctaata catcatggca attgtttaat
     7081 aaagttaagt aattagttta atagaccgga ctgttggaga tgcattattt cagcagttcg
     7141 gtttttttgc tgtgctaaaa atagattcaa tttggcgaat ctaacggcaa tgtttgaagg
     7201 tggttaataa atgtatttga agataaaaag tgtgcttgaa gaatagggaa gcgatgcaat
     7261 ggatattcat attaaaaatt tttaataaaa taggttgcaa tatttaattg ggatgcgcta
     7321 caattaacac taataattga tattgataat tattatcaat taaatacaat cttataggag
     7381 ttgttaacaa catgaacaaa catcacccaa aattaaggtc tttctattct attagaaaat
     7441 caactctagg cgttgcatcg gtcattgtca gtacactatt tttaattact tctcaacatc
     7501 aagcacaagc agcagaaaat acaaatactt cagataaaat ctcggaaaat caaaataata
     7561 atgcaactac aactcagcca ccaaaggata caaatcaaac acaacctgct acgcaaccag
     7621 caaacactgc gaaaacctat cctgtagcgg atgaatcact taaagatgca attaaagatc
     7681 ctgcattaga aaataaagaa catgatatag gtccaagaga acaagtcaat ttccaattat
     7741 tagataaaaa caatgaaacg caatactatc actttttcag catcaaagat ccagcagatg
     7801 tgtattacac taaaaagaaa gcagaagttg aattagacat caatactgct tcaacatgga
     7861 agaagtttga agtatatgaa aacaatcaaa aactgccagt gagacttgta tcatatagtc
     7921 ctgtaccaga agaccatgcc tatattcgat tcccagtttc agatggcaca caagaattga
     7981 aaattgtttc ttcaactcaa attgatgatg gagctgaaac aaattatgat tatactaaat
     8041 tagtatttgc taaacctatt tataacgatt cttcacttgt aaaatcagat acaaatgatg
     8101 cagtagcaac gaatgatcaa tcaagttcag acgcaagtaa tcaaacaaac acgaatatat
     8161 ctaatcaaaa tacatcaacg acgaacaata ctagtgatca accgcagaca acgaccaata
     8221 tgagtcaacc tgcacaacca aaatcgtcag cgaatgcaga tcaagcgtca agccaaccag
     8281 ctcatgaaac aaattctaat ggtaatacta acgataaaac gaatgagtca agtaatcagt
     8341 cggatgttaa tcaacagtat ccaccagcag atgaatcact acaagatgca attaaaaacc
     8401 cggctatcat cgataaagaa catacagctg ataattggcg accaattgat tttcaaatga
     8461 aaaatgataa aggtgaaaga cagttctatc attatgctag tactgttgaa ccagcaactg
     8521 tcatttttac aaaaacagga ccaataattg aattaggttt aaagacagct tcaacatgga
     8581 agaaatttga agtttatgaa ggtgacaaaa agttaccagt cgaattagta tcatatgatt
     8641 ctgataaaga ttatgcctat attcgtttcc cagtatctaa tggtacgaga gaagttaaaa
     8701 ttgtgtcatc tattgaatat ggtgagaaca tccatgaaga ctatgattat acgctaatgg
     8761 tctttgcaca gcctattact aataacccag acgactatgt ggatgaggaa acatacaatt
     8821 tacaaaaatt attagctccg tatcacaaag ctaaaacgtt agaaagacaa gtttatgaat
     8881 tagaaaaatt acaagagaaa ttgccagaaa aatataaggc ggaatataaa aagaaattag
     8941 atcaaactag agtagagtta gctgatcaag ttaaatcagc agtgacggaa tttgaaaatg
     9001 ttacacctac aaatgatcaa ttaacagatt tacaagaagc gcattttgtt gtttttgaaa
     9061 gtgaagaaaa tagtgagtca gtcatggatg gatttgttga acatccattc tatacagcaa
     9121 ctttaaatgg tcaaaaatat gtagtgatga aaacaaagga tgacagttac tggaaagatt
     9181 taattgtaga aggtaaacgt gtcactactg tttctaaaga tcctaaaaat aattctagaa
     9241 cgctgatttt cccatatatg cctgacaaag cagtttacaa tgcgattgtt aaagtcgttg
     9301 tggcaaacat tggttatgaa ggtcaatatc atgtcagaat tataaatcag gatatcaaga
     9361 caaaagatga ggacacatca caaaataaca caagtgaacc gctaaatgta caaacaggac
     9421 aagaagataa ggtttctgat acagatatag ctgaaaatag cagcactgca acaaatccaa
     9481 aagatgcgtc tgataaagca gatgtgatag aaccagagtc tgacatggtt aaagatgctg
     9541 ataataatat tgacaaagac gtgcaacatg atgttgatca tttatccgat atgtcggata
     9601 ataatcactt cgataagtat gatcttaaag aaatggatac tcaaattgct aaagacactg
     9661 ataagggtgt tgataatagc gttggaatgt catctaatgt cgatactgat aaagactcta
     9721 ataaaaataa agacaaagtc atacagatgg atcatattgc cgataaaaat aaagttaata
     9781 ataatactgg aactgaaaca aacattgata caatgcaata tcatcctatc agtactatca
     9841 aagttactga caaaaaaaca actgaacatc tgccgagtga tattcataaa actgtagaca
     9901 aaacagtgaa agcaaaagaa aaggctggca caccatcgaa agaaaacaaa cttagtcaat
     9961 ctaaaatgct accaaaaact ggagaaacaa cttcaagtca atcatggtgg ggcttatatg
    10021 cgttattagg tatgttagct ttattcattc cgaaattcaa aaaaaatcta aataattaac
    10081 tggatatagc atatgtatga ttaactttgt agacaatgtg aaagcaatta aattataaac
    10141 tattgattgg tttaatggct ttcctttaga gtatttaaaa taaagaacag cagtgagaaa
    10201 ttttctaatt gaaaataatc ttactgctgt ttttaatatt tggatgcatt gttgtggtta
    10261 ctttaaaaag tgagcatcaa ttaacgcttt tttcgattta acaaatgtga tttaatatca
    10321 tattttaatg cgtcgttgta ttctttttca gtgatttgat cttcgattaa catacgcttt
    10381 aatacataat gttgtctttg gatactatat ttcaaatctt tatctgattt taacgttcca
    10441 tctttttcgt agggtgtata gccatatggg ctttgcaaca aaccgataag gtatgcagat
    10501 tgtgcaattg ataaatcttt tggtggaata ccaaacaaac tatatgaagc ggatgcaatt
    10561 ccggaaatat tagcgccatt ataatctcta ccgaagggaa ctatatttaa atatgtatat
    10621 ataatttcat cttttgagag taggtgttct aatctaattg ctaggcgaag ttcatttgct
    10681 tttctactat atgttttttc gttggtaaga acttgatttt taacaagttg ttgtgtaatt
    10741 gtgctaccac ctgaactttg atcagtatta aaaatatctt gtatcattgc tcttaaaatt
    10801 gcctttggta agatgccatc atgtttataa aataaagtgt cttcagatga cgttaatgct
    10861 ttaatgacat ttggacttga tgttttaggg cctataatga gtgagttttg agaatggtta
    10921 tactcatata ataaattttt gttattatga tctaataatt catcgccagg tatttgtcga
    10981 acttttttta ttaaagcatc atctgataat gagtcggatg ttttagttaa atgatgaaaa
    11041 tataaagaca tcgcaatcac agcgatagca acgatggcaa tgaaaatcat aaatataaaa
    11101 acaatgacat gtttgatagc tttatatatc ttttcaaaat gatatatacg atgattcaat
    11161 tgatgattgt tgtcttgatt cgtcatcttt aacctcctaa attacgtata gtataccata
    11221 tttaagcaat ttgactttta ttttaacgtt aattataatt agagaaaatg cataaagaat
    11281 aggataaaag gacaagtaat attatttgaa atcatcagag agctagtggt cgctgtgaac
    11341 tagtgttttt aataatatga atacaccttt ataactaaca tgtcctacgt ttattaatga
    11401 acgtatcatt aatagagtga acattatctt atgattatgt ttaagtttgg tggtaacgtg
    11461 caatcgcgcc cttacatatt tgttgtaagg gtttttttac gttcaaaaac ctttaaagta
    11521 ttttaacaag tattcaataa ataattataa ataggaggaa ataataatga cgaatgtatt
    11581 aattgaagat ttaaaatgga gaggtcttat ttatcaacaa actgatgaac aaggtattga
    11641 agatttatta aataaagaac aagtgacgtt atactgcggt gctgatccaa cggcagatag
    11701 cttacacatt ggtcacttac taccattctt aacattaaga cgttttcaag aacatggaca
    11761 tcgtcctatc gttttaattg gcggtggtac aggtatgatt ggtgatccat caggtaaatc
    11821 agaagaacgt gtgctacaaa cagaagaaca agtagataaa aatatcgaag gtattagtaa
    11881 gcaaatgcat aatatttttg aatttggaac agaccatggt gcagtgcttg ttaataatag
    11941 agactggtta ggacaaattt cattaattag ctttttacgt gactatggta aacacgtcgg
    12001 cgttaattac atgttaggta aagattcaat ccaaagtcgt ttagaacatg gtatttcata
    12061 tacagaattc acatacacga ttttacaagc tattgatttc ggtcatttga atagagaatt
    12121 gaattgtaag attcaagtag gtggatcaga tcaatggggt aatatcacaa gtggtattga
    12181 attaatgcgc cgtatgtatg gtcaaacaga ggcatacggt ttaactattc cgcttgtaac
    12241 taaatcagat ggtaagaaat ttggtaaatc tgagtcaggt gctgtttggt tagatgctga
    12301 aaaaacaagt ccttatgaat tttatcaatt ctggattaat caatcagacg aagatgtaat
    12361 taaattctta aaatacttta ctttcttagg aaaagaagaa attgatcgct tagaacaatc
    12421 taaaaatgaa gcaccgcatt tacgtgaagc tcaaaaaaca ttagctgaag aagtaactaa
    12481 atttattcat ggtgaagatg cattaaaaga tgcaatccgt atttcacaag cattatttag
    12541 tggtgattta aaatcattat cagcgaaaga attaaaagat ggatttaaag atgtgcctca
    12601 agtgacatta tcaaatgaca caacaaatat cgttgaagtc cttattgaaa caggcatttc
    12661 tccttctaaa cgacaagcac gtgaagatgt taacaatggt gcgatttata ttaatggtga
    12721 gagacaacaa gatgttaatt atgctttagc accagaagat aaaattgatg gcgaatttac
    12781 gattattcgt cgcggtaaga aaaaatactt catggttaac tatcaataaa tataattgca
    12841 tagctcaata aattagagcc tactcattac attcttagga atgaatatga gtaggctctt
    12901 aatgtacttt tctgtctgta aattatctaa agaaatctct atcgccttgg ccaggtgatt
    12961 gacgttctga tcggctttga cgttttggtt gttctttttg ttgttttaat ttcactttaa
    13021 cttcttttgt tttaccatca cggataacgg taacagtgac tgattcacca ggttttttat
    13081 tttcatataa atagcttctt aaatcaacat catctttaat tttcttgcca tcaatttctg
    13141 taataatatc acctttttta agatcaatat cactatcagc ttttgcgaca taaataccgt
    13201 cttcgctatc agtatgaagt tgctcgcgct cttcttcagg aatatctttc aaattaatta
    13261 aaccaatacc aatcgaaggg cggtcaattt taccatgttt tacaagttgt tcaattgtta
    13321 ctttaacttc attacttgga atggcaaacc cgataccttc aacttgtgtc gcagcaattt
    13381 tcattgagtt aataccaact aaattaccat taatatctac taatgcgcca cctgagttac
    13441 ctgggttaat agcagcatct gtttgaagaa cgctgacttt tgtattgcca ccagttgtct
    13501 cagcgtcaat agtacgttca cttgctgaaa tgataccaga tgttacagag ttagcaaatt
    13561 gtaatcctaa tgggttaccc attgcgaata cgctatcacc agtttgtact tttgaagagt
    13621 tggcaaattg aatcgcttta ataccttttg tattttcaat tttaagtaca gcaatatcag
    13681 ttactgcatc tttaccaact aatttcgctt taacttgttt tttattatgt aattggactc
    13741 taatttcatt tgcgccatca ataacatgat tgtttgtaac gatataagct gaattgttgt
    13801 ttatttgata gatgacacct gaacctactc cggcttcaga tggtttagat gatttgcctt
    13861 ttaataagtc gtctacactt gatgcttttt gcatgttaat aactccaaca attgtagggg
    13921 agacagattt tatcatttca tgaacggtac cgaatttctt gctttgaccg tctaattgat
    13981 tgccaccttt attatttgtt gtctggacag ttgaaccatc tttatttaaa attgtactat
    14041 ttaatacttt gcctatacca agtactagaa gtgcaccaat gattccagca atcaatgcaa
    14101 cgatgactgt tttaaaccat ggaaatttag gtcttctgta tctaggtgtt tggctatggt
    14161 ttgttgtaga atgatctgta tgattaaaat ctgacatact taacctccat tatatgattt
    14221 atatatgctt taattatgtc ttttttttat aattattgct agtaatacac tatacaactt
    14281 tagatgtatt ttcagactat cttgttctag taaaaatata gtgataaaat ctagttgtta
    14341 taaacaaata agttaagtag gtggcacaat gtattcagtg attagtaaga ttttgaattt
    14401 cattttagtt aaaatgtcaa aatcattata cgtaatcggt aaagataata ttcctaagga
    14461 tagtaaatat gtcgtaactt gtacacatga aagttataac gaagtcatta tgctaggtat
    14521 ggcattatat cctaatcaaa ttcattatat ggctaaaaaa gaattattca aaaataaatg
    14581 gattggtaaa tttttaacgt ctttaaatgc atttcctgta gatcgtgaaa atccaggacc
    14641 tagtacttta aaacgtccaa tcaatttgtt gaaagataat aagacagttg gtatcttccc
    14701 aacaggttct cgcacatcgc aagaaggtgc acctttgaaa cgtggtgctt caacaattgc
    14761 catgttaagt aagtcaccaa tattacctgt tgcttatgtt ggtcctacta agattcacgg
    14821 tcttttaaca ggacaagcat acataaatat tggtaaacca atcgatatta acgatttacc
    14881 taaagattta aaacgaaacg agcgtatcga ttatattaca aaagagattg aaacacgaac
    14941 agcaaagtta caacaagaat tgcatgaaat tgtaaaaagt ttataaaata acttgaggta
    15001 gaaatatagc tggttagtaa gcctaggtga ctataacgga gtatcgaagt agttattcta
    15061 gttacattag taatctttat atttctacct tattttaaga aggatgacat tcaatgtata
    15121 aatttttcca aaatttaggg cgttcgttaa tgttaccagt tgccatttta ccggctgcag
    15181 caattattgc cggaattggt aatacgttaa atgcacttca tgcggcgccg aaaatcgcaa
    15241 tgttctttac tacggtaggt actacgattt tagagcaatt aggtatttta tttgcaattg
    15301 gtgtagctat aggaatggca aagaaaaatg atggtgcagt cgcgcttgca gctgcgttag
    15361 gatatttttt agttacagtt gtattatcac caatgaaatt agcgccttta ttaggaatga
    15421 aagcttcgga aataaattca gcttttgaaa agatgaataa tggcaatgtc tttgttggta
    15481 ttgtaatagg tttaatagca gcttatgcat acaataagtt tagtgaaaca gaattaccat
    15541 tagcattatc attttttagt ggtaaacgtc tagttccaat tatgactgca ttttactgta
    15601 catttttagt tgtcattttg ttattcttat ggccactact ttattcatgg attgtaaaat
    15661 ttggtgaatc tatagttggt ttaggatcat ttggtgcttt cgtatatggt gttgccaaca
    15721 gattattaat tcctacagga ttacatcatg cactgaatag tgtgttctgg tttgatacga
    15781 ttggtattaa tgatattggt aaattccaaa gtggcaaaga tgctataaaa ggtattacag
    15841 gacgctatca agcgggattc ttcccaatca tgatgttcgg tattccagcg gctgcgttag
    15901 caatgtatca tacagctaaa actactcaga aaaagcaagt ttacggttgg ttcctagcga
    15961 gttcagttgc agcatttttc gttggtgtta cagagccgat tgagtttgca tttatgtttg
    16021 ttgcgccaat cttatatgtt gttcatgcgt tattaacagg attatcttta tttatcgcag
    16081 ctacattcca ttggacagct ggattttcat ttagtgcagg tttgatagat tatgtgttat
    16141 cactaattaa tccggtatca aatcatccat tgatgttgct tgttcaaggt gttgtattct
    16201 tcatcttata ctatgtgatt ttccgtgtag taatccaagt atttaactta aatacgattg
    16261 gtagaggtga aaatgaatta gttgatccaa cagttgtaaa agataatatt gctcctggtg
    16321 aaaatgatat taaacaaagt aaatatcata atcatgctat acaaatatta gaaggtttag
    16381 gtggtcaaga gaatattgtt aatttaacta attgtgcaac aaggttgcgt ctagagttaa
    16441 aagacacatc tattattgat caacagaaga ttaaaaacgc cggtgcagtt ggtgttactg
    16501 ttaatggtaa acattcaact caagttattg tcggtacaca cgtacagcag attgctgatg
    16561 aaattgaaaa acatttataa aatttaaata gctaaagcgc aaatctaact tcaatagggt
    16621 ttgcgctttt tttagtcaaa tagtagaatg atttatatct gaattttcag aaatggagtg
    16681 gggattgtga agaaaatttt atttgatgtt gatggcgttt ttttaagtga agaacgttgt
    16741 ttcgatgtct ctgcattaac ggtatatgaa ttattaatgg ataagtgtta tttaggtctt
    16801 cattcacata tagattggga aactttgact gataacgata tacaagacat taggaatcga
    16861 atttttcaaa aagataagat tttaaacaaa ttaaaatcgc tagggctgaa ttcaaattgg
    16921 gatatgttat ttatcgtttt tagtattcat ttaattgata ttttgaaaaa gttatcacat
    16981 gatgaaattg aggcattcat gtatcaagat gagcctgtca aattgaagtt gcaaaatata
    17041 agcacaaact tagcagaccg ttttaattta aatgaacaac tacctttaca atttttggat
    17101 aatgtaaaag ttggtaaaaa taatatttat gctgctttgg aagagtttgc aataacagag
    17161 ttacatgttt cggatgctac tttatttagt ttgaagggtg cattatggac gttagcgcaa
    17221 gaagtttatc aagaatggta tctaggatcg aagttgtatg aagaggttga aaagaaaata
    17281 gcacgaacta cttttaagac aggttatatt tatcaagaaa ttattttgag accggtagat
    17341 gaagttaagg tacttctgaa tgatttaaaa ggtgctggtt tcgaattagg tattgcaaca
    17401 ggtcgtcctt atactgagac tgttgtgcca tttgaaaatt taggattgtt accatatttt
    17461 gaagctgatt ttattgcaac agcaagtgat gttttagaag cagagaatat gtatccgcaa
    17521 gcacgaccat taggaaagcc gaatcctttt agttatatcg cagctttata tggtaataat
    17581 cgcgataaat atgaatctta tatcaataag caaaataaca ttgtaaataa agatgacgta
    17641 tttatagtag gcgattcgtt agctgactta ttaagtgctc aaaaaatagg tgcaacgttt
    17701 attggaacat taacaggttt aaaaggtaag gatgctgcaa gtgagttaga agcgcatcat
    17761 gccgactatg ttattaatca tttaggtgaa cttagaggtg tactagataa tttgtaattt
    17821 gattgttgtt tgacagcata acttgaagtg aataattgaa ccaaaggttt catattgagt
    17881 tacaatgaaa ttaataatga aaaaatgcca agaagcaaca ggctgggaca taaatccct
//
LOCUS       DALMNS010000060        17510 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.060, whole genome shotgun sequence.
ACCESSION   DALMNS010000060 DALMNS010000000
VERSION     DALMNS010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 17510)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17510)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17510
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.060"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..1796
                     /locus_tag="O6Y56_001645"
     CDS             <1..1796
                     /locus_tag="O6Y56_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDB5574899.1"
                     /translation="EMQANTTEILGEDDVEGVKLADGREIPADLVVMAVGIRPYTEVA
                     KESGLDVNRGIVVNDVMQTSDSNVYAVGECAEHNGKVYGLVAPLYEQGKVLADHLTNK
                     ETNGYKGSTTFTSLKVSGCDLYSAGQIVENAEIKGIEIFNSVDNNYKKIFLKDGNVVG
                     AVLYGDIDDGSRFYNMMKKGESTEDYTLVSLLTKGGEEASLSIADMADDETICGCNGV
                     DKGTIVNAITENGFTTVEEVTAKTKAGNSCGKCKPQIAQILQHTLGDDFVAAKPAGIC
                     GCTDLTRDQIVTQIRAKGLKTSKEVRHVLNFKNKGGCPKCRPAINYYLNMVYPHDHED
                     ERESRFANERYHANIQNDGTFSVIPQMRGGVTDADQLIRLGEVAKKYHVPLVKVTGSQ
                     RVGLYGVKKEELPNIWEDLGMRSASAYGKKTRSVKSCVGKEFCRFGTQYTTRLGIRLE
                     KTFEYIDTPHKFKMGVSGCPRSCVESGVKDFGIISVENGFQIYIGGNGGTEVEKAEFL
                     TTVETEDEVIKLCGALMQYYRETGIYAERTAPWLRRLGFENVKEVLLNPERQNELFER
                     IMDAKKAVEAEPWEAITSNAQARKIFEVEKV"
     gene            1800..2114
                     /gene="nirD"
                     /locus_tag="O6Y56_001646"
     CDS             1800..2114
                     /gene="nirD"
                     /locus_tag="O6Y56_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HDB5574900.1"
                     /translation="METKEKIKVTTIDELTPLIGKKVIVKGKEVGLFLTESGKIHAIH
                     NICPHKQGPLSEGTVSGEYVFCPLHDQKIDLNTGIVQEPDEGCVDVYEVEVTDGNVYI
                     CL"
     gene            2105..3082
                     /gene="cobA"
                     /locus_tag="O6Y56_001647"
     CDS             2105..3082
                     /gene="cobA"
                     /locus_tag="O6Y56_001647"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HDB5574901.1"
                     /translation="MSVDEYGKVYLIGAGPGNPNYLTKKAERLICEADVILYDRLVNP
                     LILQYANLTTEIIDVGKKPYAKHIQQEKINDCIVEAARRYNKVVRLKGGDPAIFGRVQ
                     EEVDTLNEHHIAFEIVPGVTSASAAVATMQTGLTMRTVAKSVTFSTGHFKDSEENEVD
                     VNSLVNGGTLAIYMGVKRLGKIITQIQQYTDIDYPIAIVFQASCFNEFVVKGRLSNII
                     SKLQHYSIEAKPGICIIGEVVGYTENTPKSYDPTKQFYVVSGSKHDALMLCEHLYDEG
                     YGCLLNPNDTSNGTYHSSQYDYYDAFIKQQENVTYISTDRADANTVLCH"
     gene            3390..7079
                     /locus_tag="O6Y56_001648"
     CDS             3390..7079
                     /locus_tag="O6Y56_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HDB5574902.1"
                     /translation="MGKFGLNFFKPTEKFNGNWSILESKSREWEKMYRERWSHDKEVR
                     TTHGVNCTGSCSWKVFVKNGVITWENQQTDYPSCGPDMPEYEPRGCPRGASFSWYEYS
                     PLRIKYPYIRGKLWDLWTEALEENNGNRVAAWASIVENEDKAKQYKQARGMGGHVRSN
                     WKDVTEIIAAQLLYTIKKYGPDRIAGFTPIPAMSMISYAAGARFINLLGGEMLSFYDW
                     YADLPPASPQIWGEQTDVPESSDWYNASYIIMWGSNVPLTRTPDAHFMTEVRYKGTKV
                     ISVAPDYAENVKFADNWLAPNPGSDAAIAQAMTHVILQEHYVNQPNERFINYAKQYTD
                     MPFLIMLDEDENGYKAGRFLRVSDLGQTTEQGEWKPVIHDAISDSLVVPNGTMGQRWE
                     EGKKWNLKLETEDGSKINPTLSMTEGGYELETIQFPYFDSDGDGIFNRPIPTRQVTLA
                     NGDKVRIATIFDLMASQYGVRRFDHKLESKGYDDAESKYTPAWQEAISGVKQSVVIQV
                     AKEFAQNAIDTEGRSMIIMGAGINHWFNSDTIYRSILNLVMLCGCQGVNGGGWAHYVG
                     QEKCRPIEGWSTVAFAKDWQGPPRLQNGTSWFYFATDQWKYEESNVDRLKSPLAKTEE
                     LKHQHPADYNVLAARLGWLPSYPQFNKNSLLFAEEAKDEGIESNEAILKRAIDEVKSK
                     QTQFAIEDPDLKKNHPKSLFIWRSNLISSSAKGQEYFMKHLLGTKSGLLATPNEDEKP
                     EEITWREETTGKLDLVVSLDFRMTATPLYSDIVLPAATWYEKHDLSSTDMHPYVHPFN
                     PAIDPLWESRSDWDIYKTLAKAFSEMAKDYLPGTFKDVVTTPLSHDTKQEISTPYGVV
                     KDWSKGEIEAVPGRTMPNFAIVERDYTKIYDKYVTLGPVLEKGKVGAHGVSFGVSEQY
                     EELKSMLGTWSDTNDDSVRANRPRIDTARNVADAILSISSATNGKLSQKSYEDLEEQT
                     GMPLKDISSERAAEKISFLNITSQPREVIPTAVFPGSNKQGRRYSPFTTNIERLVPFR
                     TLTGRQSYYVDHEVFQQFGESLPVYKPTLPPMVFGNRDKKIKGGTDALVLRYLTPHGK
                     WNIHSMYQDNKHMLTLFRGGPTVWISNEDAEKHDIQDNDWLEVYNRNGVVTARAVISH
                     RMPKGTMFMYHAQDKHIQTPGSEITDTRGGSHNAPTRIHLKPTQLVGGYAQISYHFNY
                     YGPIGNQRDLYVAVRKMKEVNWLED"
     gene            7069..8628
                     /gene="narH"
                     /locus_tag="O6Y56_001649"
     CDS             7069..8628
                     /gene="narH"
                     /locus_tag="O6Y56_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009384084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HDB5574903.1"
                     /translation="MKIKAQVAMVLNLDKCIGCHTCSVTCKNTWTNRPGAEYMWFNNV
                     ETKPGVGYPKRWEDQEHYKGGWVLNRKGKLELKSGSRISKIALGKIFYNPDMPLIKDY
                     YEPWNYNYEHLTTAKSGKHSPVARAYSEITGDNIEIEWGPNWEDDLAGGHVTGPKDPN
                     IQKIEEDIKFQFDETFMMYLPRLCEHCLNPSCVASCPSGAMYKRDEDGIVLVDQDACR
                     GWRYCMTGCPYKKVYFNWKTNKAEKCTFCFPRIEAGMPTVCSETCTGRMRYLGVLLYD
                     ADRVHEAASAVDEKDLYEKQLDIFLNPFDEEVIAQAEKDGIGYDWIEAAQNSPIYKLA
                     IEYKLAFPLHPEFRTMPMVWYCPPLSPIMSYFEGKNTTQNPDAIFPAIEEMRLPIEYL
                     ANIFTAGDTEPVKGALQRMAMMRSYMRSQVTQQPFDTSRLERLGITERQTKDMYRLLG
                     LAKYEDRFVIPTSHKETYLDTYHAQGSTGYNYGGEHFGDNCEGCGVAIGSGKTGQEIY
                     NENFYGGIFRD"
     gene            8621..9196
                     /gene="narJ"
                     /locus_tag="O6Y56_001650"
     CDS             8621..9196
                     /gene="narJ"
                     /locus_tag="O6Y56_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000606770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HDB5574904.1"
                     /translation="MINFDNFKKYQESFGYMAQQLCFPEKLTFHPKTFEETISKDHPA
                     YEDLVAFRNVMMTFSLSEIKAIYTDTFDFTKKAPLYMTYNKFDTQKERGQMLAKLKVL
                     YEMFGLEMVDNELSDYLPLMLQFLQVAEWRNDPRAEENIQLIIMIIEDGTYVMANALG
                     EDNNPYAYVIQALRKTLKLCLTSPKGVKHHA"
     gene            9189..9866
                     /gene="narI"
                     /locus_tag="O6Y56_001651"
     CDS             9189..9866
                     /gene="narI"
                     /locus_tag="O6Y56_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HDB5574905.1"
                     /translation="MLNQFLWVIFPYLCLVVFVAGHIARYRYDKFSWTAKSSELIERK
                     RLMWGSLLFHLGIIPVFFGHVVGLLIPKSWMDAVGVSEHLYHIGAVYIGSIFGIITLV
                     GMFLLTARRVTTKSIRRLSSASDIFVNFLLLLIVFMGCYATLVTNIQHPDFNYRTSLS
                     IWFRQLFMLKPDASLMSGVPIAFKMHILLGFTIMACWPFTRLVHVWSVPLTYINRRYI
                     IYRKNKV"
     gene            9886..10338
                     /gene="nreA"
                     /locus_tag="O6Y56_001652"
     CDS             9886..10338
                     /gene="nreA"
                     /locus_tag="O6Y56_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate respiration regulation accessory nitrate
                     sensor NreA"
                     /protein_id="HDB5574906.1"
                     /translation="MTPEAIIEDRRFQETLDKIRKEEGYDFAAIAFYESNKPSSPIKW
                     HYVSGNKNNRFKLIILRKGRGLAGTVMKTGKRMVIANVGLALGPEEKIDYPILLSESL
                     TAVLAVPLWYKNQVYGVLLFGQRDGRPLPKIFDNDDIQRKFGIFNDDK"
     gene            10362..11396
                     /gene="nreB"
                     /locus_tag="O6Y56_001653"
     CDS             10362..11396
                     /gene="nreB"
                     /locus_tag="O6Y56_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501138.1"
                     /note="Involved in the regulation of the the nitrate
                     reductase operon narGHJI; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate respiration regulation sensor histidine
                     kinase NreB"
                     /protein_id="HDB5574907.1"
                     /translation="MINEDSIQLDTLLKKYYEHSIEKIVFADDNGKIIAMNDAAKDIL
                     SEEDNYSAVANAICHRCEGYTNAYDVQSCKDCFLESMQVQATNFQVFMKTKDQKVMPF
                     TATYQLIDQDRGIHAFTLQNVSSQIEQQEKLHQQRMMRKTISAQENERKRISRELHDS
                     VIQEMLNVDVQLRLLKYQEDTTKLLEDAENIEYIVAKLIDDIRNMSVELRPASLDDLG
                     LEAAFKSYFKQFEENYGIKIIYTSNIKNTRFDSDIETVVYRVVQEAILNALKYADVNE
                     INVGIRQTGRHLVAEVIDAGNGFDPSSKPKGSGLGLYGMNERAELVSGSVNIETKIGE
                     GTNVTLNIPI"
     gene            11419..12072
                     /gene="nreC"
                     /locus_tag="O6Y56_001654"
     CDS             11419..12072
                     /gene="nreC"
                     /locus_tag="O6Y56_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002464689.1"
                     /note="Involved in the regulation of the the nitrate
                     reductase operon narGHJI; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate respiration regulation response
                     regulator NreC"
                     /protein_id="HDB5574908.1"
                     /translation="MKIVIADDHAVVRTGFSMILNYQNDMEVVATAADGVEAYQKVME
                     YKPDVLLMDLSMPPGESGLIATSKIADSFPETKILILTMFDDEEYLFHVLRNGAKGYI
                     LKNAPDEQLLLAIRTVYKGETYVDMKLTTSLVNEFVSNSNQDTANTSDPFKILSKREL
                     EILPLIAKGYGNKEIAEKLFVSVKTVEAHKTHIMTKLGLKSKPELVEYALKKKLLEF"
     gene            complement(12330..13070)
                     /locus_tag="O6Y56_001655"
     CDS             complement(12330..13070)
                     /locus_tag="O6Y56_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDB5574909.1"
                     /translation="MAYTYTLKDIFEITGVTKRTLHYYDEIGLLVPDKNDKNYRVYKQ
                     QDLEKLQKILILKSFDFDIAKIKQYISYDNEQLRKLLSEQVSKLDKKISDLQLIRLSV
                     YEFIKGHSLIDTSILNKTLQSQYDKEASIKYGHTKAYQSFIRRKDSLQSQDIRHKLTT
                     IFNKFNHMSLSHYSIQDCSDLVFEWKAFMNTIADFDDETLCCIAKTYEDDTRFKDYFN
                     SYDNQNLASYISEAVNYFLSNENKSDNF"
     gene            complement(13049..13963)
                     /locus_tag="O6Y56_001656"
     CDS             complement(13049..13963)
                     /locus_tag="O6Y56_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000276756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2268 domain-containing protein"
                     /protein_id="HDB5574910.1"
                     /translation="MYKINIIRSDSVYKNILKAPLNDRDSIFTKEILVPFKKKFEAQH
                     MPIYNDDNQIMNANHFLNAFQISPKDLRMSDQMSIQYLNNDFWSNCEKYLKVAIDQFS
                     NYSISSQVSNYHFTVLLGDSQKPLMYLNKNRGGDGGIPGYIMIYLVPSTSTINSMKSL
                     IAHEVNHNMRYQYIDWDGGSLIELIIAEGLAENYVESLYGKAYIGPWVTNTNWSRDNV
                     KIKNTIYNHLHLKHIFESMSYLYGDDINKLQGRPIVGLSHAAGYACGYHLVKYFLQKT
                     NIPIEVATTLPAYKIINEVTEFWHTHTL"
     gene            14333..15502
                     /locus_tag="O6Y56_001657"
     CDS             14333..15502
                     /locus_tag="O6Y56_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NarK/NasA family nitrate transporter"
                     /protein_id="HDB5574911.1"
                     /translation="MYKTKGGFQLTLQTLSLVVGFMAWSIIAPLMPFIKQDVNVTEGQ
                     ISIILAIPVILGSVLRVPFGYLTNIVGAKWVFFTSFIVLLFPIFFLSQAQTPGMLMAS
                     GFFLGVGGAIFSVGVTSVPKYFPKEKVGLANGIYGMGNIGTAVSSFLAPPIAGIIGWQ
                     TTVRSYLIIIALFALIMFIFGDTQERKIKVPLMAQMKTLSKNYKLYYLSYWYFITFGA
                     FVAFGIFLPNYLVNHFGIDKVDAGIRSGVFIALATFLRPIGGILGDKFNAVKVLMIDF
                     VVMIIGAIILGISDHIALFTVGCLTISICAGIGNGLIFKLVPSYFSNEAGSANGIVSM
                     MGGLGGFFPPLVITYVANLTGSSHLAFIFLAVFGCIALFTMRQLYQKEYGSLKNG"
     gene            complement(15609..16037)
                     /locus_tag="O6Y56_001658"
     CDS             complement(15609..16037)
                     /locus_tag="O6Y56_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HDB5574912.1"
                     /translation="MILNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYE
                     TDELYYLEAELAGVNKEDISIDFNNNTLTIQATRSAKHKSEQLILDERNFESLMRQFD
                     FETVDKQHITASFENGLLTITLPKIKPSNETTSSTSIPIS"
     gene            complement(16253..16699)
                     /locus_tag="O6Y56_001659"
     CDS             complement(16253..16699)
                     /locus_tag="O6Y56_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDB5574913.1"
                     /translation="MYVENSYLSKQLCFLFYVSSKEIIKKYTNYLKEYDLTYTGYIVL
                     MAIENDEKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQG
                     KAIKTPLAEISVKVFNEFNISEREASDIIDNLRNFVSKNFDYSDKK"
     gene            17096..17461
                     /locus_tag="O6Y56_001660"
     CDS             17096..17461
                     /locus_tag="O6Y56_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3139 domain-containing protein"
                     /protein_id="HDB5574914.1"
                     /translation="MKKKKNAIKVIIILFISLIVAVAFFFGLKTYQGHKNIQLIDSYL
                     EEKNLKDKIKSEKTEYSAKKGLFYKEVTFKDEPGVTYVVQPISTNKGLFVEGFDTETK
                     KSLKTAKHKYFNQNYKPSK"
BASE COUNT         6049 a         2541 c         3428 g         5492 t
ORIGIN      
        1 ttgaaatgca agccaacaca actgaaatct taggagaaga tgatgttgaa ggtgttaaat
       61 tggctgatgg acgcgagatt ccggcagact tagttgttat ggcagtaggt attcgaccat
      121 acacagaagt agccaaagaa tcaggtctag atgttaatcg aggtattgtt gtcaatgatg
      181 tgatgcaaac aagtgatagc aatgtatatg cagttggtga atgtgcagaa cataacggca
      241 aagtttatgg actcgttgca ccactatatg aacaaggtaa agtattagct gatcatttaa
      301 caaataaaga aacgaacgga tacaagggat caacaacatt tacgtcatta aaagtttctg
      361 ggtgtgactt gtatagcgct ggtcaaattg tagaaaatgc tgaaattaaa ggtattgaaa
      421 tatttaatag cgttgataat aactataaaa aaatcttttt gaaagacggt aatgtagttg
      481 gcgcagtact atatggtgat atcgatgatg gttcacgctt ttataacatg atgaaaaaag
      541 gtgaatctac tgaagattac acactggtat cattgcttac taaaggtgga gaagaggcat
      601 cgctatcaat tgctgatatg gctgatgatg aaacaatttg tggttgtaat ggtgttgata
      661 aaggcactat agtaaatgcg attacggaaa atggctttac aacagttgaa gaagtaacgg
      721 ctaaaacaaa agcggggaat tcatgtggta aatgtaaacc gcaaattgct caaatattac
      781 agcacacctt aggagatgac tttgtcgccg caaaacctgc tggtatatgt ggttgtactg
      841 atttgacacg cgatcaaatt gtaacgcaaa taagagcgaa aggtttaaaa acatctaaag
      901 aagttcgaca tgttttaaac tttaaaaata aaggtggatg tccaaaatgt cgaccagcaa
      961 tcaactatta tttaaacatg gtttatccac atgatcatga agatgaaaga gaatcaagat
     1021 ttgctaacga acgttaccat gcgaatattc aaaatgatgg tacattttct gttatacctc
     1081 aaatgcgtgg gggtgttaca gatgcagacc aactgattcg tctaggagaa gtggctaaga
     1141 aatatcatgt accattagtt aaagtgacag gttcacaacg tgttggtttg tatggagtta
     1201 aaaaagaaga attaccaaat atatgggaag acctaggtat gcgttcagca tcagcttatg
     1261 gtaagaaaac acgctcagtt aaaagctgtg ttggtaaaga gttttgtcga tttggtacgc
     1321 aatacacgac acgacttggc attcgtttag aaaaaacatt tgaatacatc gatacacctc
     1381 ataaattcaa aatgggtgta tcaggctgcc caagaagttg tgttgaatca ggtgttaaag
     1441 attttggtat tatctcagtt gaaaatggat tccaaatcta tatcggtggt aatggtggta
     1501 cagaagttga aaaagccgaa tttttaacaa ctgtagaaac agaagatgaa gtaatcaaat
     1561 tatgtggtgc tttgatgcaa tattatcgcg aaacaggtat atatgctgaa agaacagcgc
     1621 catggttaag aagacttgga tttgaaaatg taaaagaagt cttacttaac ccagaaagac
     1681 aaaatgaact atttgaacgc attatggatg ctaaaaaagc agtcgaagct gaaccttggg
     1741 aagcaataac tagcaatgcg caagcacgta aaatttttga agtggagaag gtgtaataca
     1801 tggaaacaaa agaaaaaatt aaagtgacaa ctatagatga attaacaccc ctaattggaa
     1861 aaaaggttat tgtcaaaggc aaagaggtag gattgttttt aacagaaagt ggcaaaattc
     1921 atgcgattca caatatctgt ccacacaaac aaggaccatt gtctgaaggg acagtgagtg
     1981 gggaatatgt attttgcccg ctccacgatc aaaaaattga tttaaataca ggtattgttc
     2041 aagaacctga tgaaggttgt gtagatgttt atgaggtaga agttacagac gggaacgtat
     2101 atatatgtct gtagatgaat atggcaaggt ttacttgata ggtgcgggac caggtaatcc
     2161 gaattatttg actaaaaaag ctgagcgttt aatatgtgaa gcggatgtca ttctatatga
     2221 tcgattagtg aatccgttga ttttacaata tgcgaatttg actactgaaa ttatcgatgt
     2281 tggtaaaaag ccgtatgcaa aacatattca gcaagaaaaa ataaatgact gtatcgtgga
     2341 agcagcgcgt cgttataaca aggttgttag acttaaaggt ggcgatccag cgatatttgg
     2401 tcgtgtgcaa gaagaagtcg acacactaaa tgaacatcat attgcgtttg aaattgtacc
     2461 aggggtgaca tcagcgagcg cagcagttgc tactatgcag acaggtttga caatgcgtac
     2521 agttgctaaa agtgtgacat tttctacagg tcactttaaa gattcagaag aaaatgaagt
     2581 ggatgtcaat tccttagtga atggtggcac gttagcaatt tatatggggg taaaacgttt
     2641 agggaaaatt atcacacaga tacaacaata cacagatatt gattacccga tagcgattgt
     2701 ctttcaagca tcgtgtttta acgagtttgt tgttaagggg cgtttaagta atattatttc
     2761 aaaattgcaa cactattcaa ttgaggcgaa accaggtata tgtattattg gggaagttgt
     2821 tggctatact gaaaacactc ctaaatcata tgatcctacg aagcaatttt atgtagtaag
     2881 tggttctaaa catgacgccc ttatgctctg tgaacattta tatgacgaag gttatggctg
     2941 tttgctaaac ccaaatgata catcgaatgg cacatatcat tcgtcgcaat atgattacta
     3001 tgatgcattt attaagcagc aagaaaatgt aacatatatt tcaaccgatc gtgcagatgc
     3061 taatacagtg ttatgtcact aatttataaa aataaatgaa taagtaaggt ttcaaccgag
     3121 agaatatatt cgtgttgaag ccttatttgt cgttgtgcca aatttgaacg atttagattg
     3181 gcaataagca tgaccataca tgattgtgta ttatttcaat gaaatcccgt tattgatagg
     3241 gaaattcctt aagtaattag gtgattccct aatattttat gtttgtgaaa aaatgtacaa
     3301 tctaattaaa gcaatagtct tgggcatttt aaagtattta aaaacacgac atctacacat
     3361 cgtattttta tacgtaggag gatataaata tgggaaaatt tggattgaat ttctttaaac
     3421 caacagaaaa atttaatggg aattggtcga tcctagaaag taaaagtaga gaatgggaaa
     3481 aaatgtacag agaacgttgg agccatgata aagaagtaag aacaacacat ggtgttaact
     3541 gtacaggctc atgttcttgg aaagtatttg tgaaaaatgg tgttattacc tgggaaaatc
     3601 aacaaactga ctatccaagt tgtggtccgg atatgcctga atatgaaccg agaggctgtc
     3661 cacgaggtgc gtcattctct tggtatgaat acagtcctct tcgaatcaaa tatccatata
     3721 ttcgtggaaa actctgggat ttatggactg aagcattaga agaaaacaat ggtaatcgcg
     3781 ttgctgcatg ggcgtctatt gttgaaaatg aagacaaagc caaacaatat aagcaagccc
     3841 gaggtatggg agggcacgtg cgttcaaatt ggaaagacgt gacagagata atcgcagcac
     3901 aattactgta tacaataaaa aaatatggtc cagatcgaat cgcaggattt acacctattc
     3961 cagcgatgtc aatgattagt tatgcagcag gtgctcgatt catcaatttg cttggtggtg
     4021 aaatgcttag tttttatgac tggtatgcag atttaccacc tgcctctcca caaatttggg
     4081 gagagcaaac agatgtgcct gaatcaagtg actggtataa cgcatcatac attattatgt
     4141 ggggatctaa tgtaccttta acacgtactc cggatgcaca ttttatgaca gaagtccgct
     4201 ataaaggtac aaaagtcatt tcagtagcac cagattacgc agaaaatgtg aaatttgctg
     4261 ataactggct agcaccgaac cctggttcag atgctgcaat tgcacaagca atgacgcatg
     4321 ttattttaca agaacattat gttaatcaac ctaatgaacg ctttataaat tacgccaaac
     4381 aatatacaga tatgccgttt cttatcatgc tggatgaaga tgaaaatgga tataaagcgg
     4441 gtcgattttt aagagtgagt gacttaggtc aaacaacaga gcaaggcgaa tggaagccag
     4501 ttattcatga tgcaatcagc gatagtttag tagtacctaa tggcacaatg ggtcaacgtt
     4561 gggaagaagg taagaagtgg aacttaaaac tagaaacaga agatggttct aaaattaatc
     4621 ctacattatc aatgacagaa ggtggatacg aattagaaac gattcaattc ccatactttg
     4681 atagtgatgg agatgggata ttcaatcgtc caattccaac tcgacaagtc actttagcaa
     4741 atggtgacaa agtccgtatt gctacaattt ttgacttaat ggcaagtcaa tatggcgtgc
     4801 gtcgttttga tcataaatta gaatcaaaag gatacgacga tgcagaatca aaatatacac
     4861 ctgcttggca agaagccatt tcaggcgtaa aacaaagtgt tgtcattcaa gtagctaaag
     4921 aatttgcgca aaacgctatc gatactgaag ggcgttcaat gattatcatg ggtgcgggta
     4981 ttaaccattg gtttaactca gatacgattt atcgttcaat cttaaactta gttatgttat
     5041 gtggctgtca aggtgtgaat ggtggcggtt gggctcacta tgtgggacaa gaaaaatgtc
     5101 gcccgattga aggatggagt actgtcgcat ttgcgaaaga ctggcaagga ccaccacgtt
     5161 tgcaaaacgg aacaagttgg ttctattttg cgacagacca atggaaatat gaagagtcaa
     5221 atgtagatcg tttaaaatct ccattagcta aaacagagga gttaaagcat caacatccag
     5281 ctgattataa tgttttagca gctagacttg gttggttacc atcatatcca caatttaata
     5341 aaaatagttt gttgtttgca gaagaagcta aagatgaagg cattgagtcg aatgaggcaa
     5401 ttttaaaacg cgcgatagat gaagttaagt caaaacaaac gcaatttgcg atagaagatc
     5461 cggatctgaa aaagaatcat ccgaaatcac tgtttatatg gcgctcaaat ctaatctcaa
     5521 gttctgcaaa aggtcaagaa tactttatga agcatttact tggcacaaaa tcagggttat
     5581 tagctacacc aaatgaagat gaaaagccag aagaaattac gtggcgtgag gaaacaacag
     5641 ggaaattaga tttagtcgtt tctttagatt tcagaatgac agcaacaccg ttatattctg
     5701 acattgtatt gccagcagcg acttggtatg aaaagcatga tttgtcatct acagatatgc
     5761 atccatatgt acatcctttt aatccagcta ttgatccatt atgggaatcg cgttcagact
     5821 gggatattta taaaacgttg gcaaaagcat tttcagaaat ggcaaaagac tatttacctg
     5881 gaacgtttaa agatgttgtg acaacgccac ttagtcatga tacaaagcaa gaaatttcaa
     5941 caccatacgg cgtagtgaaa gattggtcga agggtgaaat tgaagcggta cctggacgca
     6001 caatgcctaa ctttgcaatt gtagaacgcg actacactaa aatttacgac aaatatgtca
     6061 cgcttggtcc tgtacttgaa aaagggaaag ttggagcgca tggtgtaagt ttcggtgtca
     6121 gtgaacaata tgaagaatta aaaagtatgt taggtacgtg gagtgataca aatgatgatt
     6181 ctgtgagagc gaatcgtcca cgtattgata cagcacgtaa tgtagctgat gcaatactaa
     6241 gtatttcatc tgctacgaat ggtaaattat cacaaaaatc ttatgaagat ctcgaagaac
     6301 aaactggaat gccgttaaaa gatatttcta gcgaacgcgc tgctgagaaa atttcgtttt
     6361 taaatataac ttcacaacca cgagaagtaa taccgacagc agtatttcca ggttcaaata
     6421 aacaaggtcg acgatattca ccatttacaa cgaatataga acgtctagta ccttttagaa
     6481 cattaacagg acgtcaaagt tattatgtgg atcacgaagt tttccaacaa tttggggaga
     6541 gcttaccagt atataaaccg acattgccgc caatggtatt tggtaataga gataagaaaa
     6601 ttaaaggtgg tacagatgct ttggtactac gttatttaac gcctcatgga aaatggaaca
     6661 tacactcaat gtatcaagat aataagcata tgttgacact atttagaggt ggtccaacgg
     6721 tttggatatc aaatgaagat gctgaaaaac acgatatcca agataatgat tggctagaag
     6781 tgtataaccg taatggtgtt gtaacggcaa gagcagttat ttcgcatcgt atgcctaaag
     6841 gtacaatgtt tatgtatcat gcacaagata aacatattca aacgcctggg tcagaaatta
     6901 cagatacacg tggtggttca cacaacgcgc cgactagaat ccatttgaaa ccaacacaac
     6961 tagtcggagg atacgcacaa attagttatc actttaatta ttatggacca attgggaacc
     7021 aaagggattt atatgtagca gttagaaaga tgaaggaggt taattggctt gaagattaaa
     7081 gcgcaagttg cgatggtatt aaatttagat aaatgcatag gatgccatac gtgtagtgtg
     7141 acatgtaaaa acacttggac aaatcgtcca ggtgctgagt acatgtggtt caacaacgta
     7201 gaaacgaagc caggtgtagg gtatccgaaa cgttgggaag accaagaaca ctacaaaggt
     7261 ggttgggtac taaatcgtaa agggaaactt gaattaaaat ctggaagtag aatttcaaaa
     7321 attgctttag gtaaaatttt ttataaccca gatatgccat taattaaaga ttattatgag
     7381 ccatggaact ataattatga acatttaaca actgcgaaat cagggaagca ttcgccagtt
     7441 gctagagcgt attcagaaat tacaggggat aacattgaaa ttgaatgggg acctaactgg
     7501 gaagatgact tagcaggtgg tcatgttaca ggcccaaaag atcctaacat ccaaaaaata
     7561 gaagaagata ttaaattcca atttgacgaa acttttatga tgtatttacc acgtttatgt
     7621 gaacattgct tgaatccaag ttgcgttgca tcgtgtcctt caggtgctat gtataaacgt
     7681 gatgaagatg gcattgtatt agttgaccaa gacgcatgtc gtggatggcg ttactgtatg
     7741 acaggttgtc catataagaa agtttacttc aattggaaaa cgaacaaagc tgaaaagtgt
     7801 acattctgtt tcccgagaat cgaggcgggt atgcctacgg tatgctctga aacttgtaca
     7861 ggacgtatgc gttacttagg tgttttatta tatgatgcag atcgagttca tgaagcagct
     7921 tcagcagtag acgagaaaga tttatacgaa aaacaattag atatattctt aaatccattt
     7981 gacgaagaag tcattgctca agctgaaaaa gatggtattg gttacgattg gattgaagct
     8041 gcacaaaact ctccaattta taagttagca attgaatata aacttgcatt tccgttacat
     8101 cctgaattta gaacgatgcc gatggtttgg tattgcccac cacttagccc aattatgagc
     8161 tattttgaag gtaaaaatac aactcaaaat ccagatgcga ttttcccagc cattgaagaa
     8221 atgcgtttac caattgaata cttagctaat attttcactg caggagatac agaaccagta
     8281 aaaggagccc tacaacgtat ggcaatgatg agaagttata tgagatctca agttactcaa
     8341 cagccatttg acacttctcg attagagcga ttaggtataa cggagcgcca aactaaagac
     8401 atgtatcgtt tattaggact agccaaatat gaagatcgat ttgttattcc aacatcacac
     8461 aaagaaacct atttagatac gtatcacgca caaggtagta caggatacaa ttacggcggc
     8521 gagcattttg gagataactg tgaaggctgt ggcgttgcaa taggttcagg gaaaactggt
     8581 caagaaattt ataatgagaa tttctatgga gggattttcc gtgattaatt tcgataattt
     8641 taaaaaatat caggaaagtt ttggatatat ggcacaacag ttatgttttc cagaaaaatt
     8701 aacttttcat ccaaaaactt ttgaagaaac aatttcgaaa gatcatccag catatgaaga
     8761 tttagtagca tttagaaatg taatgatgac attttcatta tcagaaatca aagcgattta
     8821 tacagataca tttgatttta cgaaaaaagc accattatat atgacgtata acaaatttga
     8881 tacgcaaaaa gaacgtgggc aaatgttagc taaattaaag gtattatatg aaatgtttgg
     8941 actagaaatg gtagataatg aactttctga ttatctaccg ttgatgcttc aatttttgca
     9001 agtggcagaa tggcgaaatg atccaagagc tgaagagaat attcaattaa tcattatgat
     9061 tattgaggat ggaacatatg tgatggcgaa tgcacttggt gaagataaca atccatatgc
     9121 ctatgtgatt caagcactta gaaaaacatt gaaattatgt ttgacatcac caaaaggagt
     9181 gaaacatcat gcttaatcag tttttatggg ttatatttcc gtatttatgt ttagttgtct
     9241 ttgtcgcagg tcatattgca cgttatcgtt atgataaatt ttcttggaca gctaaatcta
     9301 gtgaactaat agaaagaaaa agattgatgt ggggaagttt attatttcac ttaggtatta
     9361 ttccagtgtt ttttggacac gtagttggat tgttaatacc taaatcatgg atggatgcag
     9421 tgggtgtgtc tgagcattta tatcatatag gcgctgttta tattggtagc atctttggta
     9481 taataacttt ggtagggatg tttttattaa cagcgagacg tgttactacg aaaagtattc
     9541 gaagattaag ttcagcgtcg gatatatttg taaatttctt attattactt atcgtattta
     9601 tgggatgtta cgcaacatta gtaacaaata tacaacatcc agattttaac tacagaactt
     9661 cattatcaat ttggtttaga caattattta tgttaaaacc agatgcgtca ttgatgagtg
     9721 gtgtgccgat tgcatttaaa atgcatatat tgttaggttt cactattatg gcttgttggc
     9781 catttacacg tttggtgcat gtttggagtg tacctttgac atatataaat cgcagatata
     9841 ttatttaccg taagaataaa gtgtaagcat aagaggtgaa aggatttgac accagaagca
     9901 ataattgaag atcgtagatt tcaagagaca ttagataaaa tacgcaaaga agagggttat
     9961 gattttgcgg caatcgcttt ctatgaatct aacaaaccat catctccaat aaaatggcac
    10021 tatgtttcag gtaataaaaa taatcgattt aaattgatta ttctaagaaa aggtcgtgga
    10081 ttagctggaa ctgttatgaa aacaggaaag cgtatggtaa tagccaatgt tggtttagct
    10141 ttagggcctg aagaaaagat tgactatcca attttattga gtgaatcatt aacagcagtt
    10201 ttagcagtgc cgctttggta taagaatcaa gtgtatggcg tactattatt tggtcaaaga
    10261 gatggtcgtc ctttaccaaa aatatttgat aatgatgata ttcaacgtaa gtttggtatt
    10321 ttcaatgatg ataaataatg agatgaatta gggtgtaagt catgattaat gaggacagta
    10381 tacagttaga tactttattg aaaaaatatt atgagcattc aatcgaaaag atagtttttg
    10441 ctgatgataa cggtaaaatt attgcaatga atgatgctgc taaagatata ttatctgaag
    10501 aagataatta cagtgctgtg gcgaatgcga tttgtcacag atgtgaaggg tatacaaatg
    10561 cctatgatgt acaatcatgt aaagactgtt tcttagaatc gatgcaagta caagctacga
    10621 atttccaagt atttatgaag acgaaagatc aaaaagtgat gccatttaca gcaacatatc
    10681 agttgattga tcaagacagg ggaattcatg catttacgct tcaaaatgtt tcatcacaaa
    10741 ttgaacagca agagaaatta catcaacaac gtatgatgcg taaaacaatc tcagcccaag
    10801 aaaatgaaag aaagcgaatt tctagagagt tacatgatag tgtgattcaa gaaatgctca
    10861 atgtagatgt tcaattgaga ttattaaaat atcaagaaga tacaactaag cttttggaag
    10921 acgcagaaaa tattgaatat attgtcgcta aattaattga tgatatacgt aatatgtcgg
    10981 ttgaattaag acccgcttct ttggatgatc taggccttga agcagctttc aaatcatatt
    11041 ttaaacagtt tgaagaaaat tatggaataa aaatcatata tacatcaaat attaaaaata
    11101 ctcgctttga tagtgatatt gaaacggttg tttatcgagt agtgcaagaa gctattctaa
    11161 atgcgttgaa atacgctgat gtaaatgaaa taaatgtagg tatccgtcaa actgggcgcc
    11221 atttggtagc agaagtgata gatgcgggaa atggttttga tccaagttct aagcctaaag
    11281 gttctggact cggtttatat ggaatgaatg agcgagctga gttagtcagc ggtagcgtca
    11341 atattgaaac gaaaattggt gagggtacca atgttacatt gaacattcca atttgaaaca
    11401 tacattgggg gaataaaatt gaaaatagtc attgccgatg atcacgctgt tgtccgtacg
    11461 gggttctcta tgattttaaa ttatcaaaat gatatggaag ttgttgcaac ggctgcagat
    11521 ggcgtcgaag cttaccaaaa agtaatggaa tataaacctg atgtgttact aatggattta
    11581 agtatgccac caggcgagtc aggtcttatc gctacgagta aaattgctga cagttttcct
    11641 gaaactaaaa tactaatatt aacaatgttt gatgatgagg agtatttgtt ccatgtgttg
    11701 cgtaatggtg cgaaaggtta catattgaaa aatgcacctg atgaacaatt attgttagct
    11761 attcgaactg tatataaagg tgaaacatat gtagatatga aactaacaac atctttagtg
    11821 aatgaatttg tatctaattc aaatcaggac actgcaaaca catcagatcc ttttaaaatc
    11881 ttatcaaaac gagaactaga aatattgcca cttattgcca aaggttacgg aaataaagaa
    11941 attgcagaga aattatttgt atctgtgaaa acagtagaag cacataagac gcatattatg
    12001 acaaagcttg gcttaaagag taaacctgag ctagttgaat atgcattgaa aaagaaatta
    12061 ttagagtttt agagtttgaa attaatataa tttagtataa aagcgcgaga ggaaatgatt
    12121 atcttctggc gcttttgtat gtttcgaaat atattttttt ataaattgaa tgaaacctaa
    12181 tcctttctcc tttcggcaac ctatactaat tcgctttgca aaggtataac ttttaatata
    12241 gttattgatt tagagaataa ataattagtt ttctactttg aacaagtatt ttagttggtg
    12301 tattcagtgt tgtagcacct gtatgaggat taaaaattgt cgctcttatt ctcattgctc
    12361 aaaaaataat taacagcttc tgaaatgtat gatgctaaat tttgattatc atatgaatta
    12421 aagtaatctt tgaaacgcgt atcatcttca tatgttttag caatacagca taatgtttca
    12481 tcatcaaaat cagcgatagt gttcataaat gccttccact caaatacgag atcactacaa
    12541 tcttggattg aataatgact caaagacata tgattaaatt tattgaagat agttgtcaat
    12601 ttatgtctga tatcctgtga ttgtaagctg tctttacgtc taataaatga ttgatatgct
    12661 ttcgtatgac catattttat agatgcttct ttatcatatt gtgactgtag tgtcttgttt
    12721 aaaatgctgg tatctattag agagtgtcct ttaataaatt catatacaga gagtctaatt
    12781 aattgtaagt cagaaatctt tttatctaac ttgcttactt gctctgataa taactttcgc
    12841 aattgttcat tatcatatga aatgtattgt tttattttag cgatatcaaa atcaaaagac
    12901 ttgagtatta aaatcttttg taatttttct aagtcttgct gtttataaac gcgataattt
    12961 ttatcatttt tatctggaac taataatcct atttcatcgt aataatgtaa agttctttta
    13021 gttacacctg taatttcaaa aatatctttt aaagtgtatg tgtatgccaa aattcagtca
    13081 cctcatttat tattttatat gctggaagtg ttgtggcaac ttcaataggt atgtttgttt
    13141 tttgtaaaaa gtatttcacc aagtgataac cacatgcata cccggcagca tgagataagc
    13201 caacgatagg cctaccttga agtttattaa tatcatcacc atagagataa gacatcgatt
    13261 caaatatatg ctttaaatgt aaatgattat aaatagtatt tttgattttt acgttatcac
    13321 gactccaatt agtatttgtt acccacggtc caatatacgc tttaccatac aatgattcta
    13381 catagttttc agctaatcct tctgcaataa tcaattcaat caaacttccg ccatcccaat
    13441 caatatattg atagcgcata ttatgattta cttcatgtgc aattaagctt ttcatagaat
    13501 taattgtact tgtactcggc actaaataaa tcataatata acctggtatg ccaccatcac
    13561 caccgcgatt tttatttaga tacataagtg gtttttggct atctccaagt aatactgtga
    13621 aatgataatt agaaacttga gatgagatac tataatttga aaattgatct atagcaactt
    13681 ttaaatattt ttcgcaatta ctccagaaat cattattcag gtattgtatt gacatttggt
    13741 cagacatccg taaatctttg ggtgaaattt gaaaggcatt taaaaaatga tttgcattca
    13801 ttatctggtt gtcatcatta taaataggca tatgctgtgc ctcaaatttc tttttaaaag
    13861 gtactaatat ttctttagtg aaaattgaat cacggtcgtt taatggtgcc ttgagtatat
    13921 tcttatagac ggaatctgat ctaataatat tgattttata catgataaac ctccttacgt
    13981 tgtcagcata aagggtaacg taacgtgatt ttcaagcagt aattgtaact aattgaaaaa
    14041 attttaaaaa agtatgtgag tgttcctaaa taatatgatt aaaatgatgg cgaataagtg
    14101 tctaaaagta tcttaaaggg acattgtata gggtaaatta cttcataaat aagggaaaat
    14161 ccttatgttc actttttcac aatcataata aaatatatat gtagtcaata ctttgtctat
    14221 attgaatgtt ttcatataaa tgaaagcatt tttaaataac attgacctct aatatatagg
    14281 cagagtattg atatctatta aaaaataaat gattttggtg aaggtgaaac gtatgtacaa
    14341 aacaaaaggt ggctttcaac ttacattaca gacattaagt ttagtggttg ggtttatggc
    14401 ttggagtata attgcgccat taatgccctt tattaaacaa gatgtcaatg ttactgaagg
    14461 tcaaatatca atcattttag cgataccagt tattttggga tcggtgctcc gtgtgccatt
    14521 tggttatcta acaaacattg ttggcgctaa atgggtattc tttactagtt ttatcgtatt
    14581 gttattccca atatttttct taagccaagc acaaacaccg ggtatgttaa tggcgtcagg
    14641 atttttcctt ggcgtaggtg gtgcaatttt ctcagttggt gttacatcag ttcctaaata
    14701 tttccctaaa gaaaaagtag gtctagcaaa tggtatttat ggtatgggga atatcggtac
    14761 agcagtttct tcatttttag caccgccaat tgcgggtatt attggttggc aaacaactgt
    14821 tagaagttac ttaattatta tcgctttatt tgcattaatt atgtttatat ttggtgatac
    14881 acaagaacgt aaaattaaag tgccattaat ggcacaaatg aaaacattat ccaaaaacta
    14941 caaattatat tacttgagtt attggtattt cattactttt ggtgcttttg tagcatttgg
    15001 tattttctta cctaactact tagtaaatca ttttggaatt gacaaagtag atgctggtat
    15061 tcgatcaggt gtattcattg cgctggcaac attcttaaga ccaataggtg gcattttagg
    15121 tgataaattt aatgcagtta aagtattgat gattgatttt gttgttatga ttatcggtgc
    15181 cattatttta ggtatttcag accatatcgc attattcact gtaggttgtt taacaataag
    15241 tatttgtgca ggtattggta acggcttaat cttcaaatta gtaccatcat acttctcaaa
    15301 tgaagcggga tccgcaaatg gtatcgtatc aatgatgggt ggtttaggag gattcttccc
    15361 accactagta atcacatacg tagctaattt aacaggatca agtcatttag catttatttt
    15421 cttagcggta tttggatgta ttgcattatt tacaatgcgc caattatatc aaaaagaata
    15481 tggttcattg aaaaacggtt gatatgtaat acatgacatt catttggtta aatacaaagc
    15541 cttaatatca tgcgcaatat tcgtagcatg acattaaggc tttagtagtg tattcatttt
    15601 aaattttact atgaaattgg aatagatgtt gatgaagtag tttcattgct tggtttgatt
    15661 ttaggcaagg taatagttaa taacccattt tcaaaactag cagtaatatg ttgcttgtca
    15721 acagtttcaa aatcaaattg acgcattaat gattcgaagt tacgctcatc taaaatgagt
    15781 tgttcagatt tgtgttttgc gcttctagta gcttgaatag tgagcgtatt attattgaaa
    15841 tcgatactaa tatcttcttt atttacacct gctagttcag cttctaagta atataattcg
    15901 tctgtttcat atatattcgt tacaaatgaa ggtgttgaaa agtaattaaa tacttgttta
    15961 cctaaatctt taaatgtatc acttggatta ccgttaaaaa agttttgatt ctcgaattga
    16021 ttgaagttca atatcatcac ttccattata taaatttgta ttacaaagcc attatatgag
    16081 tagtattaaa aaagataaag taaaagggga gataaaaaag ttataaatgg atagatttgt
    16141 gcctgataag gaatcagggc aaaagaactg agcatcgaga tttatacaag caataaagat
    16201 aatgtataaa catagcgatg catacttctg cccatcacct tatgatagga agttactttt
    16261 tgtcggaata gtcaaaattt ttagaaacaa aattccgcaa attatcaatt atatctgatg
    16321 cttctcgttc tgaaatgttg aattcattaa agactttaac agaaatttca gcaagagggg
    16381 tttttattgc tttaccttgt tctgttagag aaatttgtag gtttctttca tctttctctt
    16441 cgcgtgttcg aacgacgtaa tctttctttt ctaatttctt tagtaatggt gtcagcgtac
    16501 cagaatctaa gaatacacgt tcacctaact ttttgatgtt aagtttttca tcattttcaa
    16561 tcgccattaa aacaatgtaa ccagtatagg ttaaatcata ttccttaaga tagtttgtgt
    16621 attttttaat tatttctttt gaagaaacat aaaataaaaa acacaactgt ttgctaagat
    16681 agctgttttc tacatacatc caatcactcc ttgttaaaat aaacaatatt atgaagtgta
    16741 atagttgtca agtactgatt tcatcgcaat tatcgaattg tctataattg aatttaaatg
    16801 ttaaataatg aaaaatatat caatatctta gtattttcat cggtaatgac tgatatgact
    16861 gattttttaa attgaaaaaa atgcaattgt atcatcctta attgttaaaa gtagtcaatt
    16921 attttgatag atagtaaaat gaaatttgtt attaaatttt ttaaaagcat cgtgtatgta
    16981 attcgatttc tataataata ttgagaataa aaaaattgtt acaatctggt aaaaactctt
    17041 tattaaataa attgattcgt tcatactgaa tagataagca aaaaggagtc acataatgaa
    17101 gaagaaaaaa aacgcgatta aagttattat tatattattt atttcgttaa ttgttgctgt
    17161 agcatttttc tttggtttga aaacatatca aggccataag aatattcaac taattgacag
    17221 ttacttggaa gaaaaaaatc taaaagataa aattaaatca gaaaaaacag agtatagtgc
    17281 taaaaaaggt ctcttctata aggaagttac gtttaaagat gaacctggtg taacttatgt
    17341 tgtgcaacca atcagtacta ataaaggatt atttgttgaa ggctttgata cagagactaa
    17401 gaaaagtttg aaaactgcaa agcataaata ttttaatcaa aattataaac catcaaaata
    17461 gtgaagcgta taactggtga aacagtttag tgccttcaat tttaattatt
//
LOCUS       DALMNS010000061        17211 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.061, whole genome shotgun sequence.
ACCESSION   DALMNS010000061 DALMNS010000000
VERSION     DALMNS010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 17211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17211
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.061"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            718..2730
                     /locus_tag="O6Y56_001661"
     CDS             718..2730
                     /locus_tag="O6Y56_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000370571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDB5574915.1"
                     /translation="MDNSYFFEHLDANTESNPRIHSIIRDLKKLSQEEKKQVYVINKP
                     VGERKYKYAYKDAVVILIPKVKLLVINVGNDTDAFEDFSADFIEDLGIISDKYNYNNF
                     LGRPRKWRDKLVKKVDFQTTDDITSIIESCSLTGIDARKGELLISLLTGSINDIDRVD
                     GELPGNTLEQIKKNITLFDGEQTRFIYKQPDKKVVTIQGLAGTGKTELLLHKLKDIYV
                     NEEKSKIFFTCYSKILAQDLNERIPAFFDFMKVNEQIKWGERLWVERSWGSKVDKNSG
                     LYSFICDYYEIPFQRYNWSISFESVCKDALEKLNQLESEGIFEPFFDYILIDESQDFN
                     EVFFELCKKVTIKQVYIAGDIFQSIYYYNENTEIVPDFLLNRVYRTDPKTLMFAHAIG
                     FGLLERPVVRWLSDEEWEACGYTIEKEGDYYSFSREPLKRFENIAEDITSLKLSVALD
                     DKYLDKVLSAIQDIREKNPTVEPGDIGVVFLEDNNSNYELAEQLIIKVDQMFGWKSIK
                     GYEVKNKTKNALFISNRNNIKGLEFPFIICITTSVLNSNTNIRNSLYMMLTRSFITSY
                     LILSEENGELNSKLGDAAEKLNDTGQLKVEKPKPDEIMDKSKLMLEASENKSQYQIVE
                     EILRQSFHIQDQKAKEKIHEMVNVLLPGSVDFEKIYKVINKNIDMV"
     gene            2740..3393
                     /locus_tag="O6Y56_001662"
     CDS             2740..3393
                     /locus_tag="O6Y56_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000657815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574916.1"
                     /translation="MKEFTVRMTKRFVEIASEPIRTKQHVIMLMLEAILLLKNADVLE
                     KPSNNYIILKVDKMKRLFFVIENKIFSFNFPFSVEVQEESNNLIIYDSITNLELNALN
                     LTVLKLAFKETFFGKEIQGILDLDSELMQVIDSFETKPNKDEVWQVLKNLQMFESGYL
                     RYDYDEVHENGKLHPLNHIDINYTPHGTFKIGIKDTLDCNAFMDILDLNTDSYFISK"
     gene            complement(3702..4274)
                     /locus_tag="O6Y56_001663"
     CDS             complement(3702..4274)
                     /locus_tag="O6Y56_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000414203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574917.1"
                     /translation="MEKNEYTAKYNEYSQLLDATYSQAVAYLLNKYGAVTDDYYKEKS
                     YTRFLNGEIKSISKGKYTRASEGLYCHHISEDKFQNLSDLRFISEFKYSYNYQKKENL
                     VYCDLIEHLILHAIITKESKGQFGVAGLCQMIKPTVIDWYIGEYNPKPAWMQATKARA
                     YLPGILVEKLLIKIDDMLKGIEIYDFLESR"
     gene            complement(4375..4716)
                     /locus_tag="O6Y56_001664"
     CDS             complement(4375..4716)
                     /locus_tag="O6Y56_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3969 family protein"
                     /protein_id="HDB5574918.1"
                     /translation="MITFENIQQLEKYTLMTMHGLFNQLKLGIISIDNAEHSLFTPYM
                     METLSSLDVKTDIIDLIHKGTELEDFAAFNLSIDDTVTVCLQRTEELLKQYKNVEFND
                     KILINWRIMQE"
     gene            complement(4757..5383)
                     /locus_tag="O6Y56_001665"
     CDS             complement(4757..5383)
                     /locus_tag="O6Y56_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574919.1"
                     /translation="MKFKAIVAITLSLSLLTACGANQHKENSSKSNDTNKKTQQTDNT
                     TQSNTEKQMTPQEAEDIVRNDYKARGANENQTLNYKTNLERSNEHEYYVEHLVRDAVG
                     TPLKRCAIVNRHNGTIINIFDDMSEKDKEEFEAFKKRSPKYNPGMSDQAEMDNESEDI
                     QHHDIDNNKAIQNDTPDQKVDDKNDKNAVNKEEKHDNRENNSAETKVK"
     gene            complement(5459..6454)
                     /locus_tag="O6Y56_001666"
     CDS             complement(5459..6454)
                     /locus_tag="O6Y56_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4352 domain-containing protein"
                     /protein_id="HDB5574920.1"
                     /translation="MSNQFKSEEERRQWEQFQAFQNQQNQQHQQYGQKKSKKGWFWGC
                     GGCLVLFILIIIGISACTAGITGNLGGNSSKETNKTHKIGETVKNGDLEVTVNSVETM
                     KSVGPSLAPTNAKGIFVVADVTIKNKGKEALTIDSSMFKLKSGDKTFEADNTGSMSAN
                     QSDNGSIENSFFLQRINPDSTAQGKIVFDVSENIANAKYKKLEVISSLFSVKKITFDL
                     SDAKKTSKAKKDKQDTEVAVASSNSDNVSYEASATTPATTSSEDSDSEDSEKSNKDED
                     KQNASKSDKSSVEKSESNEETTPVEPMRQSKPTTSEAPPSQNIHNEDSMYDASTE"
     gene            complement(6535..7185)
                     /locus_tag="O6Y56_001667"
     CDS             complement(6535..7185)
                     /locus_tag="O6Y56_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excalibur calcium-binding domain-containing
                     protein"
                     /protein_id="HDB5574921.1"
                     /translation="MKITYKYRGDLPLNTENNKNQNQSAKNSERRGMLKGCGGCLISF
                     ILLIILLSACSMMFSNNDNSTSNQSSKTQLTQKDEDKSENMPEEKSESETDKDLQSTE
                     EVPANENTENNQHEIDEITTTDQSDDEINTPNVAEEESQDDLKDDLNEKQQPSDHHQS
                     TQPKTSPSTETNKQQSFANCKQLRQVYPNGVTADHPAYRPHLDRDKDKRACEPDKY"
     gene            7488..7943
                     /locus_tag="O6Y56_001668"
     CDS             7488..7943
                     /locus_tag="O6Y56_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4909 domain-containing protein"
                     /protein_id="HDB5574922.1"
                     /translation="MKICLMLYLLIFLSSCGTNNKIVGQRFEIQQHNETIGSIYFSVD
                     YAHIRGIEKGTVKYFVDKVGSKRYLFIEYIPDNVLNCKPDFWKTLKYKKDKITYYVYL
                     IENLDDEVFHLSALQDMNRIPIDIADDVATMGKSPHQNDRMTLKLNKNN"
     gene            8103..9581
                     /gene="menE"
                     /locus_tag="O6Y56_001669"
     CDS             8103..9581
                     /gene="menE"
                     /locus_tag="O6Y56_001669"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HDB5574923.1"
                     /translation="MDFWLYKQAQQNGHHIAITDGQETYTYQNLYCEASLLAKRLKAY
                     QQSRVGLYIDNSIQSIILIHACWLANIEIAMINTRLTPNEMKNQMRSIDVQLIFCTLP
                     LELRGFQIVSLDDIEFAGTDITMNGLLDKTMDIQYDTSNETVVPKESPPNILNTSFNL
                     DDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLS
                     VLLRAAIEGFTVRIVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEPYDLQK
                     ILLGGAKLSATMIETALQYNLPIYNSFGMTETCSQFLTATPEMLHARPDTVGMPSANV
                     DVKIKNPNKEGHGELMIKGANVMNGYLYPTDLTGTFENGYFNTGDIAEIDHEGYVMIY
                     DRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISK
                     AQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKLYRG"
     gene            9586..10587
                     /gene="menC"
                     /locus_tag="O6Y56_001670"
     CDS             9586..10587
                     /gene="menC"
                     /locus_tag="O6Y56_001670"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HDB5574924.1"
                     /translation="MKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAY
                     FGECNAFQTDWYDHETIASVKHVIEQWFEDNRNKSFETYEAALKLVDSLENTPAARAT
                     IVMALYQMFHVLPSFSVAYGATASGLSNEQLESLKATKPTRIKLKWTPQIMYQIRVLR
                     ELDFHFQLVIDANESLDRQDFTQLQLLAREQVLYIEEPFKDISMLDDVVDGTIPPIAL
                     DEKATSLSAIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGVKVVIGGMYEYG
                     LSCYFTAMLARKGDYPGDVTPAGYYFEQDVVAHSGILKEGRLEFRPPLVDITQLQPY"
     gene            complement(10584..10841)
                     /gene="yidD"
                     /locus_tag="O6Y56_001671"
     CDS             complement(10584..10841)
                     /gene="yidD"
                     /locus_tag="O6Y56_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDB5574925.1"
                     /translation="MKKIFLAMIHFYQRFISPLTPPTCRFYPTCSEYTREAIQYHGAF
                     KGLYLGIRRILKCHPLHKGGFDPVPLKKDKSASKHSHKHNH"
     gene            10907..11380
                     /gene="ytkD"
                     /locus_tag="O6Y56_001672"
     CDS             10907..11380
                     /gene="ytkD"
                     /locus_tag="O6Y56_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphatase YtkD"
                     /protein_id="HDB5574926.1"
                     /translation="MKFRDKDNRQVNLTFKKDNEIADGNHVLAIPTFKNQLLFTKHNL
                     RGIEFPGGKRECGESSAEAVTRELYEETGAKVKNIHYIAQYTIETHDQTDFVKDVYFI
                     EVESLVSKNDYLETAGPVLFNCINDIELAQRSFLLQDSTILKCVERVQSLGFYQT"
     gene            11385..12131
                     /locus_tag="O6Y56_001673"
     CDS             11385..12131
                     /locus_tag="O6Y56_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HDB5574927.1"
                     /translation="MPIESFTHQFEEITYLSDDLQVKALMMTPHHEVKRIVVYLRGGK
                     GQVGRVRAGRLMQFSDSQTLVIGPYYRGNNGSEGKDEFYRGDLNDVTQLLRLLHNKYP
                     QAFIHMVGFSRGGLQGLLTFQDLPVSSYIIWGGVSDIDLMYEERVDLRGMLRRMIGHP
                     KKDRAAYEARQAIPNINENSPPILIVHGGKDQQVGIHHAYYLADQLELKGATHETFYQ
                     MAEGHVPRPPAMVETLTYIKEFMNQVELHR"
     gene            complement(12425..14017)
                     /gene="pckA"
                     /locus_tag="O6Y56_001674"
     CDS             complement(12425..14017)
                     /gene="pckA"
                     /locus_tag="O6Y56_001674"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDB5574928.1"
                     /translation="MSVDTYTETTKIDKLLKKPTSHFQLSTTQLYNKILDNNEGVLTE
                     LGAVNASTGKYTGRSPKDKFFVSEPSYRDNIDWGEINQPIDEETFLKLYHKVLDYLDK
                     KDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPESKEEATKIKPNFTIVS
                     APHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMS
                     MHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAK
                     AINLSKEKEPQIFDAIKYGAILENTVVSEDGSVDFEDNRYTENTRAAYPINHIDNIVV
                     PSKAAHPNTIIFLTADAFGVIPPISKLNKDQAMYHFLSGFTSKLAGTERGVTEPEPSF
                     STCFGAPFFPLHPTVYADLLGELIDLHDVDVYLVNTGWTGGKYGVGRRISLHYTRQMV
                     NQAISGKLKNAEYTKDSTFGLSIPVEIEDVPKTILNPINAWSDKEKYKAQAEDLIQRF
                     EKNFEKFGEKVEHIAEKGSFNK"
     regulatory      14172..14283
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            14389..15582
                     /locus_tag="O6Y56_001675"
     CDS             14389..15582
                     /locus_tag="O6Y56_001675"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDB5574929.1"
                     /translation="MLNNKRLFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVAC
                     ETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQS
                     PDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKR
                     LSDVRKDGTLNYLRPDGKVQVTVEYDENDNPVRIDTIVVSTQHAEDVTLEQIQEDIKA
                     HVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCF
                     SGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKV
                     SEGQLVEAVRKHFDLRPAGIIKMLDLKQPIYKQTAAYGHFGRTDVLFPWEKLDKVEEL
                     KDAVK"
     gene            15707..16615
                     /locus_tag="O6Y56_001676"
     CDS             15707..16615
                     /locus_tag="O6Y56_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NERD domain-containing protein"
                     /protein_id="HDB5574930.1"
                     /translation="MDLSSPVVIGLIIAVVIALIFFVLFLVALGSKKKVKRQTEEKYE
                     QQEQNIKKSHEEALEKERIQNKKTITKQQEDYNHMVSTKDREIDALKLFSKNHSEYVT
                     DMRLIGIRERLVKEKRIRPEDMHIMANIFLPKDGFNNIERISHLVLTRTGLYIIDSQL
                     LKGHVYNGISGGQFKDLPPMEQVFDTLDLDKSRPQTIVMDQNDDKRSLSFVNYSDQIE
                     AIKQLAEDLQKELGAKYTPTSILYFNPKNEGDVTISNYNQNSAVKVLVGAEQLDEFFN
                     KFVFHGRIQYNVEDLQQMMDKIESFN"
     gene            16827..>17211
                     /locus_tag="O6Y56_001677"
     CDS             16827..>17211
                     /locus_tag="O6Y56_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDB5574931.1"
                     /translation="MEVKTFYNGNTMPQIGLGTFRVENDENCMESVKYAIEQGYRSID
                     TAKVYGNEEQVGAGIRAGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGL
                     KYLDLYLVHWPGTNEAVMVDTWKGME"
BASE COUNT         5756 a         2545 c         3159 g         5751 t
ORIGIN      
        1 agttgatgct tgtcatacaa agtaagataa attaaattta atgattactt atgaggaagg
       61 tttacgaatc ggggaagtgt taatcgttaa gacataaaga ctttgtcact taggataatc
      121 aaattcattt catactcaga tatggtaatg accttcaggc caatattaaa ctaaagaagg
      181 aaagaacaat atatgtaagt aaagaactta tggcacttta ttcagggaat tatgtattga
      241 gtattgtgag gatcttgagc acaattatgt ctttattttt ttaacacaag catatttcgg
      301 aaaaccgcta aagtatcaaa gggttattga tctggtaaga agaattgtta aaagaactgg
      361 aatagaattt acgtcactct aatgcaacac agctaattag ggatggatag gttgttgcat
      421 cctttcaaaa gagattaggg catacacatg ttcaagcaac attaaacacc tatatacttt
      481 tttcagatca gtataagaaa tttaagttta ataaatatct ttagagaaag aaaaatgaat
      541 gattcaaata aaaggagaat tatcaatcaa attgagatta acaaaaaata gtttcattga
      601 aaatgaagag gtgtacacta aagattagtt tagatgttct tgaattaaag atattactta
      661 tcctttattt caaatgtatg gaatcatact tattaattag cgaaaggatg gaagttaatg
      721 gataatagct atttctttga acacttggat gctaatacag agagtaatcc aaggattcat
      781 tctataataa gggatctgaa aaaactatcc caagaggaaa aaaaacaagt atatgtaata
      841 aacaaaccag taggtgaaag aaaatataaa tacgcttata aagatgcggt tgtaattctt
      901 attccaaaag ttaagctatt agttattaat gttggtaatg atacggatgc gtttgaagac
      961 ttttctgcgg attttattga agatcttggg attatatcag ataaatataa ttataataat
     1021 tttttgggta gaccaagaaa atggagagat aagcttgtaa aaaaagttga cttccagact
     1081 actgatgata taacttcgat tatcgaaagt tgttcattaa ctggtataga tgcacgtaaa
     1141 ggtgagttat tgatatcttt actaactgga agtatcaatg atattgatcg tgttgatgga
     1201 gaactccctg gaaatacgtt agaacaaatt aagaaaaata ttactctatt tgatggagaa
     1261 caaacaaggt tcatttacaa acaaccagat aaaaaagtag taacaattca aggtttagca
     1321 ggcacgggta aaacggaatt actgttacat aaacttaagg atatttacgt taacgaggaa
     1381 aagtcaaaaa tatttttcac ctgttatagt aagattttag cacaagattt gaatgagcga
     1441 atccctgctt tttttgattt catgaaagtt aatgagcaaa ttaaatgggg cgagcgactt
     1501 tgggtagaac gtagctgggg ctctaaagta gataaaaatt caggtttata tagttttatt
     1561 tgtgattatt acgaaattcc ttttcaaagg tacaactggt ctatatcttt tgaatcggta
     1621 tgtaaagatg ctttagaaaa gctgaatcaa cttgaatcag aagggatatt tgagccgttc
     1681 tttgattaca ttctaatcga tgaaagtcaa gattttaatg aagttttttt cgaattatgt
     1741 aaaaaagtta caataaaaca agtttatatt gccggagaca tctttcaaag tatttattac
     1801 tataatgaaa acacagaaat agtgcctgac tttcttttga atagagttta taggactgat
     1861 ccaaaaacgc taatgtttgc acacgcaata ggatttggac ttttagagag gccggtagtt
     1921 agatggttaa gtgatgaaga atgggaagcc tgtggataca caattgaaaa agaaggggat
     1981 tattacagtt tttcaagaga gcctttaaaa agatttgaaa atattgcaga agatattacc
     2041 agcctcaaac tttctgttgc tttagatgac aagtatttgg ataaagttct atcggctatt
     2101 caagatattc gagaaaaaaa tcctactgtc gaaccaggtg atattggagt cgtattcctt
     2161 gaagacaata attcaaacta tgaacttgct gaacaattga ttattaaggt tgatcaaatg
     2221 tttgggtgga aatccattaa aggttatgaa gtaaaaaata aaacaaaaaa tgctttgttt
     2281 ataagtaatc gaaataatat aaaaggtcta gaatttccct ttattatttg tataaccacc
     2341 tctgtactta atagtaatac aaatattaga aactcactat atatgatgct taccaggtca
     2401 tttatcacaa gctatttaat actttcagaa gaaaatggag aactcaattc taaacttgga
     2461 gatgcagcag aaaagttaaa cgatacggga caacttaagg tggaaaagcc aaaacctgat
     2521 gaaataatgg ataaatctaa attgatgcta gaagctagtg aaaataaatc tcaataccaa
     2581 attgtagaag agattttgcg ccaatcgttt catattcaag atcaaaaagc aaaagaaaaa
     2641 attcatgaaa tggttaatgt attgttaccg gggagtgtgg attttgaaaa aatttataag
     2701 gtaattaaca aaaatattga tatggtatag ggtgttagta tgaaagagtt tacagtacga
     2761 atgactaaaa gattcgtaga aatagcttct gaaccaatta gaacaaaaca acatgttatt
     2821 atgttaatgc tagaagctat tctattactg aaaaatgctg atgttttaga aaaaccaagt
     2881 aataattata tcatcttaaa agttgataaa atgaaacggt tgttttttgt aattgagaat
     2941 aagattttct catttaattt tcctttcagt gttgaagttc aggaagaaag taacaattta
     3001 ataatttacg attctattac taatttagaa ttaaatgcgc ttaaccttac agttctgaaa
     3061 ttagcgttta aagaaacttt ttttggaaaa gaaattcagg ggattcttga tttggattct
     3121 gaattgatgc aagttataga cagttttgaa acaaaaccga ataaagatga agtatggcaa
     3181 gtacttaaaa acctacagat gtttgaatcg ggttatttac gatacgatta tgatgaggtg
     3241 cacgaaaatg gtaagttaca cccattaaat catattgata taaattatac tcctcacggt
     3301 acctttaaga ttggaattaa agatacactt gattgtaacg cttttatgga tattcttgac
     3361 ttaaatacgg atagttattt tatctcaaaa tgacgatatc ccaaaaacgt atgagtaaac
     3421 ctatagatta caaagatctt tcacctaaga aggaaattgc atagaaaaca attttgtata
     3481 ttcctatgca atcattgatg tacattttta tattgacttt tacagtcgat ttattaaaac
     3541 caaaagaaaa ctaatacaat tcaagaccat gcaaactcat ttataaacat tgtccgttta
     3601 tagataggta tgcgtggtct attttataaa atatatttaa ttacaggttt taatatctat
     3661 aacaaaatct caacagcaaa aaataaatat ccattaatca tttatctaga ctcaaggaaa
     3721 tcatatattt ctattccttt taacatatcg tcaattttaa tgagtaattt ctctactaat
     3781 attccaggca gataggcacg tgctttggtg gcttgcatcc atgctggttt tggattatat
     3841 tcgccaatgt accaatcaat gactgttggt ttgatcattt gacataatcc agctacgcca
     3901 aattggcctt tggattcttt tgtaataatt gcatgtaaaa ttaaatgctc gattaaatcg
     3961 cagtaaacta agttttcttt cttttgataa ttatatgagt acttaaattc ggaaatgaat
     4021 cttaggtcag ataagttttg gaatttgtct tcgcttatgt gatgacaata taatccttcg
     4081 ctagctctag tgtattttcc ttttgaaata cttttgattt ctccatttaa aaatcgtgtg
     4141 tatgattttt ccttataata gtcatcggtt acagcgccat atttatttaa aaggtatgct
     4201 acagcttgcg agtaagtagc gtctaataat tgactatatt cattatattt agctgtatat
     4261 tcgtttttct ccatttcaat atacctcttt tcaaacttta taaaatgaaa tacttgtaat
     4321 ttagaaagaa taaaatcaat atccacttag ttacgttcga cttttatatg tctattactc
     4381 ttgcataatg cgccaattga ttaatatttt gtcattgaat tctacatttt tgtattgttt
     4441 taatagttct tcagttcttt gtaaacagac tgtaactgta tcatcaattg ataaattaaa
     4501 tgctgcaaag tcttctaact ctgtcccttt gtgaattaaa tcgataatgt cggttttcac
     4561 atcaagggaa gagagtgttt ccatcatata aggtgtaaag agcgaatgct ctgcattgtc
     4621 gattgaaata ataccgagtt taagttgatt aaaaagacca tgcatagtca ttaaggtgta
     4681 tttttcaagt tgttgtatat tttcaaatgt tatcatagcg gttctcctaa aaattacgat
     4741 taatcaaagt atacccttat ttaactttag tttctgctga attattttca cggttatcgt
     4801 gtttttcttc tttattaaca gcatttttat cgtttttatc atcgactttt tgatctggtg
     4861 tatcattttg aatggctttg ttattgtcaa tatcatgatg ttgaatgtct tccgactcat
     4921 tatccatttc agcttgatca ctcatacctg ggttgtattt agggcttctc tttttaaatg
     4981 cttcaaattc ttctttatct ttttctgaca tatcatcaaa aatattaata atcgtaccat
     5041 tgtgtcgatt aacaatagcg caacgtttta aaggtgtacc aactgcatcg cggacaagat
     5101 gttcaacata atattcatgt tcattacttc gttcaagatt tgttttataa tttaaagttt
     5161 gattttcgtt agcacctctt gctttgtaat cgtttcgaac gatatcttcg gcttcttgtg
     5221 gtgtcatttg cttttctgta tttgactgtg tagtgttgtc agtttgttgc gtctttttat
     5281 tagtgtcatt tgatttacta ctattttctt tatgttgatt agcaccacag gcagttaata
     5341 gtgacaatga taatgtgatt gcaacgatag ctttgaattt cattttttta tctccttgat
     5401 ttgattatgt ataattaatt tttccgtaaa agaagggtag ccaagctacc ctgaaatttt
     5461 attctgttga agcgtcgtac atgctatctt cattgtgaat attttgacta ggtggtgctt
     5521 cactagtggt aggtttgctc tggcgcatgg gctctacagg agtagtttcc tcattagatt
     5581 cacttttttc tacactagat ttatcacttt tagacgcatt ctgcttatcc tcatctttat
     5641 tagacttttc gctatcttca gaatcactat cctcactaga agttgtagca ggtgtagtag
     5701 ccgaagcttc ataacttaca ttatcgctat ttgaactcgc aacagctact tctgtatctt
     5761 gcttgtcttt tttagctttt gatgtttttt tagcatcgga taaatcaaat gtaatcttct
     5821 tgacgctaaa taaactagaa ataacttcta attttttata ttttgcgttg gctatgtttt
     5881 ctgacacatc gaaaacaatt ttaccttgag cagtgctatc aggatttata cgctgtaaga
     5941 aaaatgaatt ttctatacta ccattgtcac tttgattagc agacattgaa cctgtattat
     6001 ctgcttcaaa tgttttatca ccggatttta gcttaaacat ggaactatca attgttaacg
     6061 cttctttacc tttgttttta atcgtcacat cagcaacgac aaatatacct ttagcgtttg
     6121 ttggtgcaag agatggtcct acagatttca tagtttccac tgaatttaca gtgacttcaa
     6181 ggtcgccatt tttaacagtt tcaccgattt tatgggtttt gttcgtttct ttagaactat
     6241 ttccgccaag gttaccagtg ataccagctg tacaagctga aataccgatg ataattaaaa
     6301 taaataatac tagacaacca ccacaacccc agaaccatcc ttttttagat ttcttttgtc
     6361 cgtattgctg gtgctgttgg ttttgttgat tttggaaagc ttggaattgt tcccattgtc
     6421 ttcgctcttc ttcgcttttg aattgattgc tcatgcctaa aaaatctccc tcattattta
     6481 ctatgtgatt agtgcataaa gctaaataca atttgaattc aattcgcttg ttgtttaata
     6541 tttatcaggt tcacatgcac gtttatcttt atctctatct aaatgtggtc gatatgctgg
     6601 atgatcggca gtgacaccat tcggatatac ttgtctaagt tgcttacaat tagcaaatga
     6661 ttgttgcttg tttgtttcag ttgatggtga agtcttaggt tgagtggatt gatgatgatc
     6721 acttggttgt tgcttttcat ttaaatcatc tttcaagtca tcttgtgatt cttcttctgc
     6781 aacgtttggt gtgttaattt catcatctga ttgatctgtt gttgttattt catcaatttc
     6841 atgttgatta ttttcagtat tttcatttgc gggtacttct tcggttgatt gtaaatcctt
     6901 atctgtttct gattctgatt tttcttcagg catattttca cttttatctt cgtctttttg
     6961 agttaattgc gtttttgatg attgattact agtggaattg tcattattac taaacatcat
     7021 tgaacaggct gataataaga taattaataa aataaaagaa ataaggcaac cgccgcatcc
     7081 ttttaacatg ccacgtcttt cagaattttt agcagattgg ttttgattct tgttgttctc
     7141 tgtattcaaa ggtaaatctc ctctatattt atatgttatt ttcatgattt actacataaa
     7201 acctggatgc atttaagagg gagttattaa gtgtaaaacg ctttcactat atcacataat
     7261 catattttac caaattagta gtggaaatac tttaattttt ttcaaaactt taaaaacatt
     7321 tttggattgt agaagtgtta atttaataat tgtaaagttg tattacgact caaaatgaca
     7381 cgaacatgac aacataattt aacaaaataa taatttctat ttgatataat atattgtatt
     7441 tatttttaga ggtgttgctt ttgaaaaagt ttttaaaatt caaggggatg aaaatatgtt
     7501 taatgctata tctactgatt tttttaagta gttgtggcac aaataataaa atagtaggcc
     7561 aacgatttga aatacaacaa cataatgaaa caataggtag tatttacttt tcagtagact
     7621 atgcacatat aagaggtata gaaaaaggca ctgtaaaata tttcgtagac aaggtaggca
     7681 gcaaacgtta cttatttatt gaatatattc cggataatgt attgaattgt aagccggact
     7741 tttggaaaac gttaaaatat aaaaaggaca agataacata ttatgtatat ctcattgaaa
     7801 atttagatga tgaagtattc catttaagtg cattacaaga catgaatcgt ataccaattg
     7861 acattgcaga tgatgtggca acaatgggta aatcaccaca tcagaatgac agaatgacac
     7921 taaaattaaa taaaaataac tgatatttag tagacgaatg atataacgat atgtattgag
     7981 cattataaca atcatatcaa tgaatcaatt cgtctacttt tttatatttt taaacataac
     8041 cactgctaga atgtcataaa atcgttataa ttataatgta aatgattttg gaggaatagc
     8101 gcatggactt ttggttatat aaacaagcac aacaaaatgg acatcatatt gcgataacag
     8161 acggtcaaga aacttataca tatcaaaatt tatactgtga agcgagtcta ttggctaaaa
     8221 gactcaaggc ttatcaacaa tctcgtgttg ggctatacat agataattcg attcaatcaa
     8281 tcattttaat acatgcatgt tggttggcaa atattgaaat tgcgatgatt aatacaaggt
     8341 tgacacctaa tgagatgaag aatcagatga ggtcaatcga tgtacaattg attttttgta
     8401 ccttgccact ggaattgcga gggtttcaaa ttgtatcgtt ggatgatatt gaattcgctg
     8461 gaacggatat tacaatgaac ggtttgttgg acaagacaat ggatatccaa tatgatacat
     8521 cgaatgaaac tgtggtgccg aaagagtcgc cgcccaacat attaaataca tcatttaatt
     8581 tagatgacat tgcatcgatt atgtttacat cagggacaac tggccctcaa aaagcggtgc
     8641 cacaaacgtt tcgtaatcat tatgccagtg caatcggatg taaagagagc ttgggatttg
     8701 atcgtgatac taattggcta tctgtcttgc cgatttatca tatttcgggt ctcagtgtac
     8761 ttttaagagc tgctattgaa gggtttactg tgcgcattgt tgataaattc aatgccgaac
     8821 aaattttaac gatgataaaa aatgaacgca tcacacacat ttcgcttgtg ccacaaactt
     8881 taaattggct tatgcaacaa ggtttacatg aaccttatga tttacaaaaa atattactcg
     8941 gcggtgctaa attatctgcc actatgatag agacggcatt acaatataac ctgccaattt
     9001 ataattcatt tggtatgact gagacatgtt cgcaattttt aacagcaaca ccggaaatgt
     9061 tgcatgcacg tcctgacact gtagggatgc caagtgccaa tgttgacgta aaaattaaaa
     9121 atcctaataa agaaggtcat ggagaattaa tgattaaagg cgccaatgtg atgaatggat
     9181 atttgtatcc aacagattta acgggtacgt ttgaaaatgg ttattttaat acgggtgaca
     9241 ttgctgaaat agatcatgaa ggttatgtca tgatttatga ccgacgtaaa gatttaatta
     9301 ttagtggcgg tgaaaatatt tatccatatc aaattgaaac ggtagcgaag caatttccag
     9361 gtatcagtga cgcagtatgt gtagggcatc ctgatgatac ttggggccaa gtgcctaaat
     9421 tatattttgt cagtgaaagt gacatttcaa aggcacaatt gattgcatat ttatcacaac
     9481 atttagcgaa atataaagta ccgaaacact ttgaaaaggt tgatacttta ccttatacat
     9541 caacaggtaa attacaaaga aataagttgt atagaggatg atttgatgaa gttgacagct
     9601 ttgcattttt ataaatatag tgagccattt aagtcacaaa ttgtaacacc gaaagtcact
     9661 ttaacgcatc gtgattgttt gtttatcgaa ttgattgatg ataaaggaaa tgcatatttc
     9721 ggggaatgta acgcttttca aacagattgg tatgatcatg aaacaattgc ttcagtgaaa
     9781 catgtaattg agcaatggtt cgaagataat agaaataaat catttgaaac gtatgaagca
     9841 gcactaaaat tagtagattc attggaaaat acgcctgctg caagggcaac tattgtcatg
     9901 gcattgtatc aaatgtttca tgtactgcct tcattttcag tagcatatgg agcgacagcg
     9961 agcggcttat caaatgaaca actagagtca ttgaaagcaa caaagccgac cagaattaaa
    10021 ttaaaatgga cgcctcaaat catgtatcaa attagagtgt tacgggaatt agacttccac
    10081 tttcaattgg ttatagatgc aaatgagtcc ttggatcgtc aagattttac acagttacag
    10141 ttattagcgc gtgaacaggt tctttatatc gaagagccat ttaaagatat ctccatgctt
    10201 gatgacgtag tggatggaac aatacctcca attgctcttg atgaaaaggc gacgtcactg
    10261 tcggccataa ttaatttgat agaattatac aatgtgaaag ttgtcgtatt aaaaccattt
    10321 cgtttaggtg gcattgataa agtgcaaacg gcaattgata ctttgaaaag tcatggtgta
    10381 aaagtggtta ttggcggcat gtacgaatat ggtttaagct gttattttac agcgatgctg
    10441 gctcgtaaag gtgattatcc aggagatgtt acaccagcag gttattattt tgaacaagat
    10501 gtggtggcgc attcaggcat attaaaagag gggcgactcg aatttcgccc ccctttagtg
    10561 gatataactc aattacaacc atattaatgg ttatgtttat gtgaatgctt gcttgctgac
    10621 ttgtcttttt ttaacggaac agggtcaaag ccacctttat gaagcggatg acattttaaa
    10681 atacgacgga tgcctaaata aaggcctttg aaagcaccgt ggtattgaat cgcttctcta
    10741 gtgtactctg aacatgttgg ataaaaacga caagttggtg gagtgagtgg cgaaatgaaa
    10801 cgctgataaa aatgaatcat cgccaagaat atctttttca taattaatgc ctccaacgat
    10861 agtaattaac tattatatta acatacaatg tagggatgtg atgcgcgtga agtttaggga
    10921 taaagataat cgtcaagtta atttgacatt taaaaaggat aatgagatag cagatggcaa
    10981 tcatgtgcta gctattccaa cgtttaaaaa tcaattgctt tttaccaaac ataatttacg
    11041 aggtattgaa tttcctggtg gtaaaaggga atgcggggaa agtagtgctg aagcagttac
    11101 ccgtgaatta tatgaagaaa caggtgccaa agttaaaaat attcattaca tagcacaata
    11161 taccattgaa acacatgatc aaactgattt tgtaaaagat gtatatttta tcgaagttga
    11221 atcattggta agcaagaacg attatttaga aacagcaggg ccagtgttgt ttaactgtat
    11281 caatgatatt gaactcgcac aacggagttt cttactgcaa gatagtacca ttttaaaatg
    11341 cgtagagagg gtgcaatcac ttggatttta tcaaacgtaa acgaatgcca attgaatctt
    11401 ttacgcatca attcgaagaa attacatatt tgtcagatga cttacaagta aaagctttaa
    11461 tgatgacacc acatcatgaa gtaaaacgca ttgtagtata tttgcgaggt ggcaaaggcc
    11521 aagtaggacg tgtgcgcgca ggtagattaa tgcaattttc agatagtcaa actttagtga
    11581 ttgggccata ctaccgaggt aacaatggca gtgaaggtaa agatgaattt tatcgtggcg
    11641 atttaaatga tgtgacgcaa ctattaaggt tgctacataa taaatatccg caagctttta
    11701 ttcatatggt tggtttttca agaggtggac tacaagggtt gttgacgttt caagatctac
    11761 cagtaagtag ttatatcatc tggggtggag tctcagatat tgatttgatg tatgaagagc
    11821 gcgttgattt aagagggatg ttacgtagaa tgattggtca tccgaaaaaa gatcgagcag
    11881 catatgaggc acgccaagcg attccaaaca ttaatgaaaa cagtccacca atattaattg
    11941 tacatggagg gaaagaccag caagttggta ttcatcatgc gtattattta gcggatcaac
    12001 tagagttaaa aggtgccacg catgaaactt tttatcaaat ggcagaagga catgtgccaa
    12061 gaccaccagc gatggttgaa acattgactt atattaaaga gtttatgaac caagttgagt
    12121 tgcataggta gtatgaaacg tggtgtgcac atgggaacta tcaatctttg aagatgtgtg
    12181 atatacgttg aatgaggaat cggtatttaa tgcaaagtgg ggcaacatgc atagcgttag
    12241 gaatcggtac tttatgtgaa gacgtgctgc ttccattgaa tgagtgatgc gagtttggca
    12301 cgaaggtcac cttaaatgtg ctttgttgta ataaaattgc ctataaactc ttaccatata
    12361 aaataagagg agccaaccat tgttaaaata taacagcggt tggctcttta attagtatgc
    12421 aaatttattt gttgaagcta cctttttcag caatatgttc aactttttca ccaaattttt
    12481 cgaagttctt ttcaaaacgt tgaattaaat cttctgcttg tgctttatat ttctctttgt
    12541 cgctccaagc attaattgga tttaaaattg ttttcggtac atcttcaatt tctacaggaa
    12601 tgcttaaacc aaatgtacta tcttttgtat attctgcatt tttcaattta ccagaaatcg
    12661 cttggtttac catttgacgt gtgtaatgta agctgattct acgtcctaca ccatattttc
    12721 cgccagtcca tccagtatta acaagataaa catcaacatc atgtaaatcg ataagttcac
    12781 ctaataaatc agcgtaaaca gtagggtgta acgggaagaa cggtgcgccg aaacatgttg
    12841 agaatgatgg ttcaggttct gtcacaccac gctctgtacc agctaattta gaagtgaaac
    12901 cactcaagaa atgatacatt gcttggtctt tatttaactt tgaaatcggt ggaataacac
    12961 caaatgcatc cgcagttaag aaaataattg tatttggatg tgctgctttt gatggtacta
    13021 caatattgtc aatgtgatta attggataag ccgcacgtgt attttctgta taacgattat
    13081 cttcaaagtc cactgaacca tcttctgaaa caaccgtgtt ttctaggatt gcaccatatt
    13141 tgattgcgtc aaaaatctgt ggttcttttt ctttggaaag attaattgct tttgcatagc
    13201 agccaccttc gatattaaag accccgtttt tattccagcc gtgttcatca tcaccgatta
    13261 gtttacggtg tgggtcagcc gataaggttg ttttacctgt gccagataga ccaaagaata
    13321 atgcaacatc gcctttttca ccaacgtttg ctgagcaatg catgctcata atatcttgca
    13381 tcggtaagag ataattcatt acagagaaga tacctttttt catttcacca gcgtattcag
    13441 taccgccgat taaaatgact ttgtgtttaa atgaaataat gacaaaggtt tcagatttag
    13501 taccatcaac ttctggatct gctttaaaat gtggggcaga aacgatagtg aagttaggtt
    13561 taatctttgt agcttcttct tttgattcag gtctaataaa catattttta gcaaataaat
    13621 tatgccatgc taattcattg atgactgtaa gttttaacat tgtatcttta tcgctaccag
    13681 cgtagccttt aaatacgtat aattcatctt ttttatctaa atagtctagt actttatggt
    13741 ataacttcaa gaaagtttct tcatcgatag gttgattaat ttctccccaa tcaatgttat
    13801 ctctatatga aggttcagag acaaaaaatt tgtctttagg cgaacgacca gtatattttc
    13861 cagtacttgc attaacagca ccaagttctg ttaatacccc ttcgttattg tctaagattt
    13921 tattataaag ttgtgtcgtc gaaagttgaa aatgtgacgt tggttttttc agtaatttgt
    13981 caattttagt tgtttcagtg tatgtgtcta ctgacatcct aaatccctcc aaagcgataa
    14041 tttaaatgta agcctttaca tttaattagt ataacacatt aacataatta atctacaata
    14101 ttttactgta aatttatttg tgaaaaattg acattaattc attaattagg tactattatt
    14161 tttaacggat tctcttatcc tgagtggtgg agggacatgg acccaatgaa acccagcaac
    14221 ctcttttttt ataaaagaaa ggtgccaaac cgtttgcaga caaataggtc tgaacgataa
    14281 gagcgaatgg acgtattagg ccttctctct atattaatag ttagaaggtc ttttttattt
    14341 agctcacaga gagagaattt tcgtaatata aatttaaagg agcaaactat gttaaataac
    14401 aaacgattat ttacttcaga gtctgttaca gaaggacacc cagataaaat cgctgaccaa
    14461 gtgtcagatg caatattaga tgctatttta aaagacgacc caaatgcacg tgtagcttgt
    14521 gaaacaactg ttacaacagg tatggcattg atcgccggcg aaatttctac aacaacatat
    14581 gttgatattc cgaaagttgt tagagaaaca atcaaagaaa ttggatacac aagagcaaaa
    14641 tatggttatg attatgaaac aatggcaatt ttaactgcga ttgatgaaca atcacctgac
    14701 attgcacaag gcgtggataa agcattagag tatcgtgata aagatagcga agaagaaatt
    14761 gaagcaacag gtgcaggtga ccaaggttta atgtttggtt acgcaacgaa tgaaacagaa
    14821 acgtacatgc ctctagcaat ttatttatca catcaattgg caaaacgttt atctgatgtg
    14881 cgtaaagatg gtacgttaaa ttatttacga ccagacggta aagttcaggt cactgttgaa
    14941 tatgatgaaa atgataaccc tgtacgtatt gatacgattg tcgtatcaac acaacatgct
    15001 gaggatgtga cacttgaaca aattcaagaa gacatcaaag ctcatgtcat ttatccaact
    15061 gttccagaaa acttgattaa tgaacaaact aaattctaca tcaatcctac aggacgcttt
    15121 gtaatcggtg gacctcaagg tgatgcagga ttaacaggac gtaaaatcat tgttgatacg
    15181 tacggtggct atgcacgtca tggtggcgga tgcttcagtg gtaaggaccc tacaaaagta
    15241 gaccgttcag ctgcatacgc tgcacgttat gtggctaaaa atattgttgc agcaggttta
    15301 gcagatcaat gtgaagtaca attggcatat gcgattggtg ttgcagaacc agtgtcaatt
    15361 gcaattgata catttggaac aggtaaagtt tctgaaggac aacttgtcga agcggttaga
    15421 aaacactttg acctaagacc tgcaggtatt attaaaatgc ttgatttgaa acaaccgatt
    15481 tacaaacaaa ctgctgctta tggtcatttt ggacgtacag atgtcttatt cccatgggaa
    15541 aaattagaca aagtggaaga attaaaagac gcagtaaaat aataaaatga attgaatata
    15601 gctaaataaa agattttcgg tatataaatg ataatatgta tcgaaaatct ttggcttttc
    15661 tattataatt aaagttattc atatattaaa aaggagcgtt gttgtgatgg atttatcttc
    15721 accggtagtc attggactca ttattgcagt agtcattgca ttaatctttt ttgtcctttt
    15781 cttagttgcc ttaggtagta agaaaaaagt taagcgacaa acagaagaaa agtatgaaca
    15841 acaagaacaa aacattaaaa agtctcatga agaagcttta gagaaagagc gtattcaaaa
    15901 taaaaagaca attacaaaac aacaagaaga ttataatcac atggttagta caaaagatcg
    15961 tgagattgac gcattaaaat tgttctcgaa aaatcatagt gaatatgtaa cggacatgag
    16021 attaattggt attcgtgaaa gattagttaa agaaaaacga attcgaccag aagatatgca
    16081 cattatggca aatatctttt taccaaagga tggctttaat aatattgaac gaattagtca
    16141 tttagtatta acaagaactg gtctttatat cattgattct caattgttaa aaggtcatgt
    16201 ttataatggt ataagtggcg gtcaatttaa agatttacca cctatggaac aagtatttga
    16261 tacattggat ttagataaat ctagaccgca aactattgtg atggatcaaa atgatgacaa
    16321 acgttcatta tcatttgtaa attattcaga tcaaattgag gcgattaaac aattggctga
    16381 agacttacaa aaagaattag gtgctaaata tacaccgact tcaattttat actttaatcc
    16441 taaaaatgaa ggcgatgtaa cgatttcaaa ttataatcaa aatagtgctg tcaaagtgct
    16501 tgtcggtgct gaacaattag acgagttctt taacaaattt gtattccatg gtcgtattca
    16561 atacaacgtg gaagacttac aacaaatgat ggataaaatt gaatcattca attaaatgtt
    16621 aggctgaagt gatgactata tgttgttact tcggcttttt tagtttgtca taaattaaac
    16681 agaattactt ttacattttg attagtattt gagagatatt actataattt tagtggttga
    16741 ttgctataag tgttttttat catgtattca actcagattt gttatgataa cagggtataa
    16801 tacatcaaaa aggtgaggcg atatttatgg aggttaaaac attttataat ggaaacacga
    16861 tgccacaaat tggtttaggg acatttcgtg tggaaaatga tgaaaattgc atggaaagtg
    16921 ttaagtatgc cattgaacaa ggatatcgta gtattgatac cgcaaaagtt tatgggaatg
    16981 aagaacaagt aggtgctggc attcgtgccg gattggaatc aactggtatt gctagagaag
    17041 acttatttat tacttcaaaa ttatattttg aggattttgg tcgtgaaaat gtagcagctg
    17101 cctacgaagc tagtttatct agattaggtt taaaatactt agatttatat ctagttcatt
    17161 ggccaggtac gaacgaagcc gtaatggttg atacatggaa aggtatggaa g
//
LOCUS       DALMNS010000062        17056 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.062, whole genome shotgun sequence.
ACCESSION   DALMNS010000062 DALMNS010000000
VERSION     DALMNS010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 17056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17056
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.062"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..1010)
                     /gene="spa"
                     /locus_tag="O6Y56_001678"
     CDS             complement(<1..1010)
                     /gene="spa"
                     /locus_tag="O6Y56_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal protein A"
                     /protein_id="HDB5574932.1"
                     /translation="MKKKNIYSIRKLGVGIASVTLGTLLISGGVTPAANAAQHDEAQQ
                     NAFYQVLNMPNLNADQRNGFIQSLKDDPSQSANVLGEAKKLNDSQAPKADAQQNNFNK
                     DQQSAFYEILNMPNLNEAQRNGFIQSLKDDPSQSTNVLGEAKKLNESQASKADNNFNK
                     EQQNAFYEILNMPNLNEEQRNGFIQSLKDDPSQSANLLSEAKKLNESQAPKADNKFNK
                     EQQNAFYEILHLPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNDAQAPKADNKFNK
                     EQQNAFYEILHLPNLTEEQRNGFIQSLKDDPSVSKEILAEAKKLNDAQAPKEEDNNKP
                     GK"
     gene            complement(1431..2183)
                     /gene="sarS"
                     /locus_tag="O6Y56_001679"
     CDS             complement(1431..2183)
                     /gene="sarS"
                     /locus_tag="O6Y56_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarS"
                     /protein_id="HDB5574933.1"
                     /translation="MKYNNHDKIRDFIIIEAYMFRFKKKVKPEVDMTIKEFILLTYLF
                     HQQENTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQRE
                     KIAERVKLFDQIIKQFNLADQSESQMIPKDSKEFLNLMMYTMYFKNIIKKHITLSFVE
                     FTILAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILI
                     HMNDAQQDHAEQLLAQVNQLLADKDHLHLVFE"
     gene            complement(2552..3550)
                     /gene="sirC"
                     /locus_tag="O6Y56_001680"
     CDS             complement(2552..3550)
                     /gene="sirC"
                     /locus_tag="O6Y56_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000136636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B ABC transporter permease
                     subunit SirC"
                     /protein_id="HDB5574934.1"
                     /translation="MTEKINKKDNYHLIFALIFLAIVSVVSMMIGSSFIPLQRVLMYF
                     INPNDSIDQFTLEVLRLPRITLAILAGAALGMSGLMLQNVLKNPIASPDIIGITGGAS
                     LSAVVFIAFFSHLTIHLLPLFAVLGGAVAMMILLVFQTKGQIRPTTLIIIGISMQTLF
                     IALVQGLLITTKQLSAAKAYTWLVGSLYGATFKDTIILGMVILAVVPLLFLVIPKMKI
                     SILDDPVAIGLGLHVQRMKLIQLITSTILVSMAISLVGNIGFVGLIAPHIAKTIVRGS
                     YAKKLLMSAMIGAISIVIADLIGRTLFLPKEVPAGVFIAAFGAPFFIYLLLTVKKL"
     gene            complement(3547..4542)
                     /gene="sirB"
                     /locus_tag="O6Y56_001681"
     CDS             complement(3547..4542)
                     /gene="sirB"
                     /locus_tag="O6Y56_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B ABC transporter permease
                     subunit SirB"
                     /protein_id="HDB5574935.1"
                     /translation="MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFD
                     SENDLHDVVTGARASRTIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFV
                     IFSITFIQIQSFKMIVVIAFLGAIVVTVLVVALGMFRQTLFSPHRVILAGAAIAMLFT
                     AFTQGILIMNETDLQGLLFWLSGSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILM
                     TSDDIATGLGQNIKLIKWMIIMLISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYK
                     YLIPFTALAGAILMIISDIVARIIIKPLELPIGVVTAVIGAIVLIYIMKKGRQRL"
     gene            complement(4558..5550)
                     /gene="sirA"
                     /locus_tag="O6Y56_001682"
     CDS             complement(4558..5550)
                     /gene="sirA"
                     /locus_tag="O6Y56_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B ABC transporter
                     substrate-binding protein SirA"
                     /protein_id="HDB5574936.1"
                     /translation="MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAM
                     GTTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQ
                     EPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALG
                     KEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILN
                     DLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESE
                     WTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQSK"
     gene            5781..6761
                     /gene="sbnA"
                     /locus_tag="O6Y56_001683"
     CDS             5781..6761
                     /gene="sbnA"
                     /locus_tag="O6Y56_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000570808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diaminopropionate biosynthesis protein SbnA"
                     /protein_id="HDB5574937.1"
                     /translation="MIEKSQACHDSLLDSVGQTPMVQLHQLFPKHEVFAKLEYMNPGG
                     SMKDRPAKYIIEHGIKHGLITEDTHLIESTSGNLGIALAMIAKIKGLKLTCVVDPKIS
                     PTNLKIIKSYGANVEMVEEPDAHGGYLMTRIAKVQELLATIDDAYWINQYANELNWQS
                     HYHGAGTEIVETIKQPIDYFVAPVSTTGSIMGMSRKIKEVHPNAQIVAVDAKGSVIFG
                     DKPINRELPGIGASRVPEILNRSEINQVIHVDDYQSALGCRKLIDYEGIFAGGSTGSI
                     IAAIEQLITSIEEGATIVTILPDRGDRYLDLVYSDTWLEKMKSRQGVKSE"
     gene            6758..7768
                     /gene="sbnB"
                     /locus_tag="O6Y56_001684"
     CDS             6758..7768
                     /gene="sbnB"
                     /locus_tag="O6Y56_001684"
                     /EC_number="1.5.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate
                     dehydrogenase SbnB"
                     /protein_id="HDB5574938.1"
                     /translation="MNREMLYLNRSDIEQAGGNHSQVYVDALTEALTAHAHNDFVQPL
                     KPYLRQDPENGHIADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILN
                     DPETNYPIAVMEASLISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLE
                     QFDHIERVFVYDQFSEACARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQ
                     PYIEYDWLQKGAFISNISIMDVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFS
                     KEALHAELGQLVTGDVPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQNIGTTLN
                     LY"
     gene            7789..9543
                     /gene="sbnC"
                     /locus_tag="O6Y56_001685"
     CDS             7789..9543
                     /gene="sbnC"
                     /locus_tag="O6Y56_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B biosynthesis protein SbnC"
                     /protein_id="HDB5574939.1"
                     /translation="MQNHTAVNTAQTIILRDLVDALLFEDIAGIVSNSEITKENGQTL
                     LIYKRETQQIKIPVYFSALNMFRYESSQPITIEGRLSKQPLTAAEFWQTIVKMNRDLS
                     HEWEVARVEEGLTTAAKQLTKQLSELDLASHPFVMSEQFASLKDRPFHPLAKEKRGLR
                     EADYQVYQAELNQSFPLMVAAVKKTHMIHGDTANIDELENLTAPIKEQATDMLNDQGL
                     SIDDYVLFPVHPWQYQHILPNVFAKEISEKLVVLLPLKFGDYLSSSSMRSLIDIGAPY
                     NHVKVPFAMQSLGALRLTPTRYMKNGEQAEQLLRQLIEKDETLSKYVMVCDETAWWSY
                     MGQDNDIFKDQLGHLTVQLRKYPEVLAKNDTQQLVSMAALAANDRTLYQMICGKDNIS
                     KNDVMTLFEDIAQVFLKVTLSFMQYGALPELHGQNILLSFEDGRVQKCVLRDHDTVRI
                     YKPWLTAHQLSLPKYVVREDTPNTLINEDLETFFAYFQTLAVSVNLYAIIDAIQDLFG
                     VSEHELMSLLKQILKNEVATISWVTTDQLAVRHILFDKQTWPFKQILLPLLYQRDSGG
                     GSMPSGLTTVPNPMVTYD"
     gene            9536..10792
                     /gene="sbnD"
                     /locus_tag="O6Y56_001686"
     CDS             9536..10792
                     /gene="sbnD"
                     /locus_tag="O6Y56_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B export MFS transporter"
                     /protein_id="HDB5574940.1"
                     /translation="MINQTIWRSNFRILWLSQFIAIAGLTVLVPLLPIYMASLQNLSV
                     VEIQLWSGIAIAAPAVTTMIASPIWGKLGDKISRKWMVLRALLGLAVCLFLMALCTTP
                     LQFVLVRLLQGLFGGVVDASSAFASAEAPAEDRGKVLGRLQSSVSAGSLVGPLIGGVT
                     ASILGFSALLMSIAVITFIVCIFGALKLIETTHMPKSQTPNINKGIRRSFQCLLCTQQ
                     TCRFIIVGVLANFAMYGMLTALSPLASSVNHTAIDDRSVIGFLQSAFWTASILSAPLW
                     GRFNDKSYVKSVYIFATIACGCSAILQGLATNIEFLMAARILQGLTYSALIQSVMFVV
                     VNACHQQLKGTFVGTTNSMLVVGQIIGSLSGAAITSYTTPATTFIIMGVVFAVSSLFL
                     ICSTITNQINDHTLMKLWELKQKSAK"
     gene            10782..12518
                     /gene="sbnE"
                     /locus_tag="O6Y56_001687"
     CDS             10782..12518
                     /gene="sbnE"
                     /locus_tag="O6Y56_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2,3-diaminopropanoate--citrate ligase SbnE"
                     /protein_id="HDB5574941.1"
                     /translation="MQNKELIQHAAYAAIERILNEYFREENLYQVPPQNHQWSIQLSE
                     LETLTGQFAYWSAMGHHMYHPEVWLIDGKSKKLTTYKEAIARILQHMAQSADNQTAVQ
                     QHMAQIMSDIDNSIHRTARYLQSNTIDYAEDRYIVSEQSLYLGHPFHPTPKSASGFSE
                     ADLEKYAPECHTSFQLHYLAVHQDVLLTRYVEGKEDQVEKVLYQLADIDISEIPKDFI
                     LLPIHPYQINVLRQHPQYMQYSEQGLIKDLGVSGDSVYPTSSVRTVFSKALNIYLKLP
                     IHVKITNFIRTNDLEQIERTIDAAQVIASVKDEVETPHFKLMFEEGYRALLPNPLGQT
                     VEPEMDLLTNSAMIVREGIPNYHADKDIHVLASLFETMPDSPMSKLSQVIEQSGLAPE
                     AWLECYLDRTLLPILKLFSNTGISLEAHVQNTLIELKDGIPDVCFVRDLEGICLSRTI
                     ATEKQLVPNVVAASSPVVYAHDEAWHRLKYYVVVNHLGHLVSTIGKATKNEVVLWQLV
                     AHRLMTWKKEYANNAVFVDCVEDLYQTPTIAAKANLMSKLNDCGANPIYTHIPNPICH
                     NKEVSYCESNNS"
     gene            12427..14277
                     /gene="sbnF"
                     /locus_tag="O6Y56_001688"
     CDS             12427..14277
                     /gene="sbnF"
                     /locus_tag="O6Y56_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-(L-alanin-3-ylcarbamoyl)-2-[(2-
                     aminoethylcarbamoyl)methyl]-2-hydroxypropanoate synthase
                     SbnF"
                     /protein_id="HDB5574942.1"
                     /translation="MIVVQTLFIHIYQIQFVITRRYRIVNQTILNRVKTRVMHQLVSS
                     LIYENIVVYKASYQDGVGHFTIEGHDSEYRFTAEKTHSFDRIRITSPIERAVGDEVDT
                     TTDYTQLLREVVFTFPKNDEKLEQFIVELLQTELKDTQSMQYRESNPPATPETFNDYE
                     FYAMEGHQYHPSYKSRLGFTLSDNLKFGPDFVPNVKLQWLAIDKDKVETTVSRNVVVN
                     EMLRQQVGDKTYEHFVQQIETSGKHVNDVEMIPVHPWQFEHVIQVDLAEERLNGTVLW
                     LGESDELYHPQQSIRTMSPIDTTKYYLKVPISITNTSTKRVLAPHTIENAAQITDWLK
                     QIQQQDTYLKDELKTAFLGEVLGQSYLNTQLSPYKQTQVYGALGVIWRENIYHMLIDE
                     EDAIPFNALYASDKDCVPFIENWIKQYGSEAWTKQFLAVAIRPMIHMLYYHGIAFESH
                     AQNMMLIHENGWPTRIALKDFHDGVRFKREHLSEAASHLTLKPMPEAHKKVNSNSFIE
                     TDDERLVRDFLHDAFFFINIAEIILFIEKQYGIDEKLQWKWVKGIIEAYQEAFPELNN
                     YQHFDLFEPTIQVEKLTTRRLLSDSELRIHHVTNPLGVGGITDATTISET"
     gene            14252..15028
                     /gene="sbnG"
                     /locus_tag="O6Y56_001689"
     CDS             14252..15028
                     /gene="sbnG"
                     /locus_tag="O6Y56_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001186795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B biosynthesis citrate synthase
                     SbnG"
                     /protein_id="HDB5574943.1"
                     /translation="MQQLSLKHRLNNGDSVYGIFNSIPDPLMIEVIAASGYDFVVIDT
                     EHVAINDETLAHLIRAAEAAHIIPIVRVTAVIDRDIIKVLDMGARGIIVPHVKDRETV
                     EHIVKLSRYYPQGLRSLNGGRMARFGRTPLLDAMEMANEHIMVIAMIEDVEGVMAIDD
                     IAQVEGLDMIVEGAADLSQSLGIPWQTRDDQVTSHVQHIFEVVNAHGKHFCALPREDE
                     DIAKWQAQGVQTFILGDDRGKIYRHLSASLATSKQKGDED"
     gene            15028..16230
                     /gene="sbnH"
                     /locus_tag="O6Y56_001690"
     CDS             15028..16230
                     /gene="sbnH"
                     /locus_tag="O6Y56_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B biosynthesis decarboxylase
                     SbnH"
                     /protein_id="HDB5574944.1"
                     /translation="MRIVQPVIEQLKAQSHPVCHYIYDLVGLEHHLQHITSSLPSNCQ
                     MYYAMKANSERTILDTISQYVEGFEVASQGEIAKGLAFKPANHIIFGGPGKTDEELRY
                     AVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRVNLAGPFPNATLHMAGRPTQFG
                     ISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHVDVVKLYFKKAKAWSEKHRF
                     PLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEMEDVTLNFECGRFIVAHIG
                     YYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYRYKDNPYSFEKVSISR
                     QDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISHHDFLSHPHPEFIY
                     LTQTKEDE"
     gene            16234..16998
                     /gene="sbnI"
                     /locus_tag="O6Y56_001691"
     CDS             16234..16998
                     /gene="sbnI"
                     /locus_tag="O6Y56_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional transcriptional
                     regulator/O-phospho-L-serine synthase SbnI"
                     /protein_id="HDB5574945.1"
                     /translation="MNHIHEHLKLVPVDKIDLHETFEPLRLEKTKSSIEADDFIRHPI
                     LVTAMQHGRYMVIDGVHRYTSLKALGCKKVPVQEIHETQYSISTWQHKVPFGVWWETL
                     QQEHRLPWTTETRQEAPFITMCHGDTEQYLYTKDLGEAHFQVWEKVVASYSGCCSVER
                     IAQGTYPCLSQQDVLMKYQPLSYKEIEAVVHKGETVPAGVTRFNISGRCLNLQVPLAL
                     LKQDDDVEQLRNWKQFLADKFANMRCYTEKVYLVEQ"
BASE COUNT         5592 a         2727 c         3325 g         5412 t
ORIGIN      
        1 tctttaccag gcttgttatt gtcttcctct tttggtgctt gagcatcgtt tagcttttta
       61 gcttctgcta aaatttcttt gctcactgaa ggatcgtctt taaggctttg gatgaagccg
      121 ttacgttgtt cttcagttaa gttaggtaaa tgtaaaattt catagaaagc attttgttgt
      181 tctttgttga atttgttgtc agcttttggt gcttgagcat catttagctt tttagcttct
      241 gctaaaaggt tagcactttg gcttgggtca tcttttaagc tttggatgaa accattgcgt
      301 tgttcttcgt ttaagttagg taaatgtaag atttcataga aagcattttg ttgttctttg
      361 ttgaatttgt tatcagcttt cggtgcttga gattcattta actttttagc ttctgacaat
      421 aggttagcac tttgacttgg gtcatctttt aagctttgga tgaaaccatt gcgttgttct
      481 tcgttcaagt taggcatgtt caagatttca tagaaagcat tttgttgttc tttgttgaaa
      541 ttgttgtcag ctttcgatgc ttgagattca tttaattttt tagcttcacc taaaacgtta
      601 gtgctttggc ttggatcgtc tttaagactt tgaatgaaac cattgcgttg cgcttcgttt
      661 aagttaggca tgttcaaaat ttcatagaag gcgctttgtt gatctttgtt gaagttattt
      721 tgttgcgcat cagcttttgg agcttgagag tcattaagtt ttttagcttc acctaaaacg
      781 ttagcacttt ggcttggatc atctttaagg ctttggataa aaccattacg ttgatcagcg
      841 tttaagttag gcatatttaa cacttgataa aaagcatttt gttgagcttc atcgtgttgc
      901 gcagcatttg cagcaggtgt tacgccacca gatataagta atgtacctaa agttacagat
      961 gcaataccta cacctagttt acgaattgaa taaatgtttt tctttttcaa attaataccc
     1021 cctgtatgta tttgtaaagt catcataata taacgaatta tgtattgcaa tactaaaatc
     1081 tatatttata attaaattta aatgtaagtt ttacaactta taaaataaat attttgctca
     1141 aagatttatt caggaagtaa aaggattaaa accgcaaaat cacgctattt cgattaataa
     1201 aaacagataa aatatagaga tattttttat aatgaaagcg ttttaatgta tataagttaa
     1261 aaaatatttt taagaataaa gtggggcttt gaatgtgctg aggtttaatt tcggaaatgg
     1321 ttttaagaga tatagaaaat agaaagttgt tcataatgtg ctgaggtttt attaaaaaat
     1381 agaaaacaca agtgcacttt agaatacagc acacttgcgt aatagagata ttattcaaaa
     1441 acaagatgta aatgatcttt atctgctaat aattgattca cttgagctaa taattgttca
     1501 gcatggtctt gctgcgcgtc attcatatga attaaaattt ttctttcatc ttcagttgag
     1561 cgttctttta ttagatagcc ttgctttttt aaattattga gagctctaac agtttgaggg
     1621 tatttatggt ggattgtttc aattaaatct ttaagaagaa cgatgttttt attttgagaa
     1681 gtgataatag ctagaattgt gaattctaca aaacttaatg ttatatgctt tttgataata
     1741 ttcttgaaat acattgtata catcatcaag tttagaaatt ctttactatc ttttggtatc
     1801 atctgtgatt cactttgatc tgcaaggtta aattgtttaa tgatttgatc aaacaattta
     1861 acacgttctg caattttctc tcgttgttct tcagatattg aaatgtaagt attacgctcg
     1921 tcaattttac ttcgaacttt actaatatat gaatgtttca caagtacttt tatatgctgt
     1981 actaaatctg attgtttata acataaatct gaaacaatct tcttaaatgg aagtgtgttt
     2041 tcttgctgat gaaataaata agtcagtaat ataaattctt ttatagtcat atcgacttca
     2101 ggcttgactt ttttcttaaa acgaaacata tatgcttcaa tgattataaa atctctaatt
     2161 ttgtcatggt tattatattt cattgtttta tctccttgta tatgcacttt attttaatat
     2221 aacacaatat aataagaaaa ataatccata atttacaatt aaaaataata tgatattttt
     2281 gttaaaattt gtgtttttga ataaatgaca ttatcaaaca ctatatttaa ataagaaata
     2341 gctatcgata tttgaaaaat cgaagaatat tgattgatat tatagaatat gagtcggtgt
     2401 tatttgtata taaagtatta atatgtaatt aagaaagtcg acgcttgtta acattaacaa
     2461 caactatatg tataaaaaaa cctcgcaact gttagttagc tgaatcattt tgctaacgtt
     2521 gttgtgaggt cattttgttt taataatatc attataactt tttcacggtt aataataagt
     2581 atatgaagaa tggtgcacca aacgcagcaa tgaatacacc tgccggcact tctttaggca
     2641 agaatagggt gcgtccaatt aagtctgcaa taacaattga tatggcacca atcattgctg
     2701 acattagtaa ctttttagca taacttccgc gaacgattgt tttcgcgata tgtggtgcga
     2761 ttaaaccgac aaacccaatg ttacctacta aactgattgc catagatacg agtatagtag
     2821 aagtgattaa ttggattagt ttcatacgtt gcacatgtaa gcctaagcca atcgctacag
     2881 ggtcatcaag tatagatatt ttcatttttg gtataacaag aaataacaac ggcacaacag
     2941 ctaaaataac catacccaaa atgattgtat ctttaaacgt agcaccgtaa agacttccga
     3001 ctagccatgt atatgctttg gcagcagata attgcttcgt tgtaatgagt aatccttgga
     3061 caagcgcaat aaacaacgtt tgcatcgaaa taccgatgat tatgagtgtt gtcgggcgta
     3121 tttgtccttt cgtttgaaac actaatagta tcatcattgc aactgcgcca cctaatactg
     3181 caaatagtgg aagtaaatgt atcgttaaat ggctgaaaaa tgcaataaag acaacagcac
     3241 ttaagctagc accacctgtg attccgataa tatctggtga ggcaattgga tttttcaata
     3301 cattttgtaa cattaaacca ctcatcccta gtgcggcacc agctaatatc gcaagtgtaa
     3361 tgcgaggtaa gcgtaatact tctaaagtga attgatctat actgtcattt ggatttataa
     3421 agtacatcag tacgcgttgt aatggtataa agcttgaacc aatcatcata cttaccactg
     3481 aaacgatggc taaaaagatt aacgcgaaga tgagatggta attgtctttt ttattaatct
     3541 tttcggtcat aagcgttgac gtcctttctt cataatatag attaagacaa tagcgccaat
     3601 gacagcggta acgacaccga taggcaactc tagtggctta attattatac gagcaacaat
     3661 gtctgaaatg atcattagga ttgctccagc taatgcagta aaaggaatta aatacttata
     3721 gtttggtggc aataatcgtt tactaatatt cggtacgata agacccacaa agacgattga
     3781 tccagctacg gctaccgaaa taccggctaa catactgata agcataataa tcatccattt
     3841 gattaatttt atgttttgac cgaggccggt tgcaatgtcg tcacttgtca tcaagatgtt
     3901 gatgtgtgca gccatgctaa atgcaattaa aataagtatc aatacaagcg gaataatcca
     3961 tgggatatcc caaatgttac gtaatgaaac ggagccactc aaccaaaata ataggccttg
     4021 taagtctgtt tcgttcataa taagtatgcc ttgagtaaag gctgtaaata gcatcgcaat
     4081 cgcagcacct gccaaaatga cgcgatgagg tgaaaatagg gtttgtctaa acatacctag
     4141 tgcaacgact aagactgtaa caacaatagc ccccaaaaat gcgatgacaa caatcatttt
     4201 aaaagattga atttggataa atgtaatact aaagatgaca aaaaatactg cgcctgcatt
     4261 gacaccgaaa agccctggtg atgctattgg gtttcgtgta agtgcttgca tcaacaaacc
     4321 tgagacagca agggcagcac cagtcaataa cgcaatgatt gttctcgacg cccgtgcacc
     4381 agtgacaaca tcatgtaaat cgttttcact atcaaagttg aataacgcct gtatcaccgt
     4441 acctggtgac acaagcgtat ttccaatcat taaacttaag atagctacta ttgcaagaca
     4501 taaaccagca ataacgattt ggtattttgg tttaagtagc atcgtaaaac tccttaatta
     4561 ttttgattgt ttttcaatat ttaacttttc atataaatcg tcaataagtt ttaatgatga
     4621 tttatatccg ccagctaagt tccaagtgat ttcatctaaa tcatcagata cttggttgtt
     4681 tttaactgcg tctaaatttt tccactcttt acttgaagtc cattcgcttt cagtcttttt
     4741 aactaatgca gcatctttcg catttggatc tgattttact acaaaaatat gatcagcgtt
     4801 cattaatgga atgctttctt tagatgtaag ttggataata tctttaccat tatcaacttg
     4861 tttttgtaag tctttattac gtttgaatcc taaatcattt aagatttcac cagcatatcc
     4921 accagcataa attcttgtat gatcagcacg gaagttaaca actgaagctt tcaatggcca
     4981 tgcatcttta tactttgctt ttgcatcttt ttggaatgca gctactttat catcgtactt
     5041 tttaagtaaa tcttcagctt ctttttcttt ccctaaagct ttccccatta acttagttgt
     5101 atctttgaat ttgaaaactg tatcagtaga aactgttggt gcgattttag ataattgatc
     5161 gtaaactttt tcatttctaa cttttgacgc gacaattaag tccggtttta atttagagat
     5221 ttcctctaag ttaggcgcag gttcttgacc tacaatctta gtatctttta aatcattttt
     5281 tatgtattcg aatttcggtt tttgtgtcca tgattctaca gcacctacag gtttaacacc
     5341 taaagataca gcgacgtcag tggcaccttg atatagcgta acaacacgct ttggtttccc
     5401 tttaatttca gttgtaccca ttgcatgttt aattgaagtt gtttccttat ctttgttatc
     5461 agatgattgc ttatttgaat tcccactaca tcctgctaaa acaagtagga aagcaagcgt
     5521 aacaacaagc attttaatta ctttattcat tgactaatta gcctccttcg tgatgtatga
     5581 caatgagaat cattatcacg gtttagtatg aattaaattt tttcctaagt caataaaata
     5641 tttatgattt acatgcaact tataattatt tgacatataa atgcataaaa aatataatcc
     5701 taattacttg atagtgagaa ttattatcaa ttaggtaaca cacaatatta tagaatttta
     5761 aatttgagga ggaagcgctt ttgattgaaa aaagtcaagc atgtcacgat tcattgttag
     5821 attctgtagg gcaaacacct atggttcaac ttcatcaact atttccgaaa catgaagtgt
     5881 ttgcaaagtt agagtatatg aatcctggag gcagcatgaa agatcgacct gccaagtaca
     5941 tcattgaaca tggtattaaa catggtttaa tcactgagga tacacattta attgaaagta
     6001 cttctggtaa tttaggcatt gcgttggcaa tgatagctaa aatcaaggga ttaaaactca
     6061 cgtgtgttgt tgatcctaaa atatcaccaa caaatttgaa aattattaaa agttatggtg
     6121 ccaatgtaga aatggttgaa gaacctgatg cacatggggg ttatttaatg actcgtattg
     6181 caaaggtgca agaactgtta gccactattg acgatgcata ttggattaat caatatgcga
     6241 atgagttaaa ttggcaatcc cattatcatg gtgcaggcac agagattgtt gaaacaatta
     6301 agcaacctat agattatttt gtcgcgccag tcagcacgac aggtagcatt atgggtatga
     6361 gtagaaaaat aaaagaagtg catccaaacg cacaaattgt tgctgttgat gcgaaagggt
     6421 cagtcatttt tggtgacaaa cctattaata gagaattacc tggtatcggt gctagtcgtg
     6481 tacccgaaat attgaataga tcagaaatta atcaagtgat ccatgtagat gattatcaat
     6541 ctgctttggg ctgtcgaaaa ctgattgatt atgaaggtat atttgccgga ggttcaacag
     6601 gttcgattat tgcagcgatt gagcagttga taacgtcaat tgaagaaggt gcaacaattg
     6661 tcacgatttt accagatcga ggcgatcgtt acttagattt agtttattca gatacatggt
     6721 tagaaaaaat gaaatcaaga caaggagtta aatcagaatg aatagagaga tgttgtattt
     6781 aaatagatca gatattgaac aagcgggagg aaatcattca caagtttatg tggacgcatt
     6841 aacagaagca ttaacagcgc atgcgcacaa tgattttgta caaccgctta agccgtattt
     6901 aagacaggat cctgaaaatg gacacatcgc agatcgaatt attgcaatgc caagtcatat
     6961 cggtggtgaa cacgcaattt caggtattaa gtggataggt agtaagcacg acaatccatc
     7021 gaaacgtaat atggagcgtg caagtggtgt cattattttg aatgatccag aaacgaatta
     7081 tccaattgca gttatggaag caagtttgat tagtagtatg cgtactgcag cagtttcagt
     7141 gattgcagct aagcatttgg ctaaaaaagg atttaaagac ttaacaatca ttggttgcgg
     7201 gctaatcgga gacaagcaat tacaaagtat gttagagcaa ttcgatcata ttgaacgcgt
     7261 gtttgtttac gatcaattct ctgaagcatg tgcacgcttt gttgatagat ggcaacaaca
     7321 gcgtccggaa attaatttta ttgcgacaga aaatgctaaa gaagcagtat caaatggtga
     7381 agtagtcatt acatgtaccg taacggatca accatacatt gaatatgatt ggttacaaaa
     7441 aggtgcattt attagcaaca tttctatcat ggatgtgcat aaagaagtct ttattaaagc
     7501 tgacaaagtc gtagtagatg actggtcaca atgtaatcga gaaaagaaaa ctattaacca
     7561 attggtgtta gaaggtaaat ttagcaaaga agcacttcat gctgaactag gacaacttgt
     7621 gacaggtgac gtaccaggac gtgaagacga tgatgaaatc atattactta atccgatggg
     7681 tatggctatc gaagatattt caagtgctta ctttatttat caacaggcac aacaacaaaa
     7741 tattgggaca acattgaacc tatattaaga atgcgaggtg tctgaacatt gcagaatcat
     7801 acagcagtca atacagcaca aacgataata ttaagagatt tagttgatgc attattattt
     7861 gaagatatag ccggaattgt atcgaatagt gagattacta aagaaaatgg acaaacgctt
     7921 ttgatataca aacgtgaaac acaacaaata aagatacctg tttattttag tgctttaaat
     7981 atgtttcgtt atgaaagttc acaaccaatt acgatagagg gaaggctgtc taagcaacct
     8041 ttaacggcag ctgaattttg gcaaacaatc gtcaaaatga atcgtgattt aagtcatgaa
     8101 tgggaagtgg ctcgcgttga agaaggactg actactgctg ccaaacagct tactaaacaa
     8161 ttatcagaat tagatttagc gtctcatcct tttgtgatgt ccgaacagtt tgcaagttta
     8221 aaagatcgtc catttcatcc attagctaaa gaaaaaagag gattaagaga agcggattat
     8281 caagtgtatc aagctgaatt aaatcaatca tttcctttaa tggttgcagc agttaaaaag
     8341 acacatatga ttcatggcga tactgcaaat attgatgaat tagaaaattt gacagcacct
     8401 ataaaagaac aagcgacaga catgttaaat gatcaagggt tatcaataga tgactatgta
     8461 ctatttccgg tacatccttg gcaatatcag catattctgc cgaacgtctt tgcgaaagag
     8521 attagtgaaa agttggttgt actattaccg ttaaaatttg gagattatct gtcatcttca
     8581 agtatgcgtt cattaattga tattggcgca ccgtataacc atgtcaaagt accatttgca
     8641 atgcagtcat taggcgcatt aaggctaacg cctacgcgtt acatgaaaaa cggagaacaa
     8701 gcagaacaat tattacgtca gcttatagaa aaagatgaaa cactatctaa gtatgtcatg
     8761 gtttgtgatg aaacagcttg gtggtcatat atgggtcaag ataatgatat tttcaaagat
     8821 caattaggcc atttaactgt tcagctaaga aaatatcccg aagtgctagc caaaaatgat
     8881 acgcaacagc tagtgtcaat ggcagcactc gcggcaaatg atcgcacctt atatcaaatg
     8941 atttgtggaa aagataatat ttctaaaaat gatgtcatga cgttatttga agatatcgca
     9001 caagtctttt taaaggtaac actatcattt atgcaatacg gcgcattacc tgagttgcat
     9061 ggtcaaaata tattgttgtc atttgaagat ggacgtgtac aaaaatgcgt gttacgtgat
     9121 catgatactg tcagaattta taaaccatgg ctaacagcac atcagctttc attgccgaag
     9181 tatgtcgtca gagaagatac acctaatacg ctaattaatg aagatttgga aacattcttt
     9241 gcttattttc aaacattagc tgtatcggta aatctatatg ccattattga tgcaattcaa
     9301 gatttatttg gtgtaagtga gcatgaactt atgtcgttgt taaaacaaat tttaaaaaat
     9361 gaagtggcaa ctatttcctg ggttacaact gatcagctag ctgtcagaca cattttattc
     9421 gataaacaga cgtggccatt taaacaaatt ctattaccat tgctatatca acgtgatagt
     9481 ggtggaggta gtatgccttc aggtttaact accgtaccaa atccaatggt gacatatgat
     9541 taatcagact atatggcgca gtaactttcg cattttatgg ctcagtcagt ttatagcgat
     9601 tgctggactg acagtacttg tgccattatt gccaatttat atggcatcac tacaaaatct
     9661 atcagtcgta gaaatacagt tgtggagtgg tatagcgatt gctgctccag ctgtaacgac
     9721 gatgatagct tcgccgatat gggggaagct aggtgataag attagccgaa aatggatggt
     9781 gttaagagcg ttacttggtt tggcggtatg cttattttta atggcattgt gtactacacc
     9841 attacagttt gtacttgtga ggttattgca gggactattt ggtggtgttg ttgatgcatc
     9901 aagtgcgttt gcgagtgcag aggcgccagc tgaagatcgt ggcaaggtat taggaagatt
     9961 acaaagttca gtcagtgcag ggtctcttgt aggaccatta atcggcggtg ttacagcttc
    10021 gatattaggt tttagtgcgt tactgatgag tattgccgtc attactttta ttgtctgtat
    10081 tttcggtgca ttaaaattga ttgaaacgac acatatgcca aaatcacaaa caccaaatat
    10141 taataaaggt attcgccgtt catttcaatg tctattatgc acacaacaaa catgtcgatt
    10201 tattatcgtt ggcgttttag caaactttgc tatgtatggc atgctaactg cattatcacc
    10261 acttgcttca tcagtgaatc atacagcgat agatgaccgt agtgtgattg gatttttaca
    10321 gtccgcattt tggacggctt cgatattaag cgcgccttta tggggtcgct ttaatgataa
    10381 atcatatgtt aaatcagtat atatatttgc cacgattgca tgtggttgta gtgcgatact
    10441 gcaaggttta gcgacgaata tagagttttt aatggctgca agaatacttc aaggattaac
    10501 atatagtgca ttgattcaaa gtgtcatgtt tgttgttgta aatgcttgtc atcagcaact
    10561 taaaggcaca tttgttggaa cgacgaacag tatgttagtt gttggtcaaa ttattggcag
    10621 tcttagtggc gctgccatta caagttatac tacaccagct actacattta tcattatggg
    10681 cgtagtattt gcagtaagta gtttattttt aatttgttca accatcacta atcaaatcaa
    10741 cgatcacaca ttaatgaaat tatgggagtt gaaacaaaaa agtgcaaaat aaagaattaa
    10801 tacaacatgc agcgtatgcg gctattgaac gtattttaaa tgaatatttt agagaagaaa
    10861 atttatatca agtaccacct caaaatcatc aatggtctat acaattatct gagctcgaaa
    10921 cgttaacagg tcaattcgct tattggtctg cgatggggca tcatatgtat catccagaag
    10981 tatggcttat tgatggtaaa agtaagaaat taacaacata taaagaagcc attgcgcgta
    11041 ttttacaaca tatggctcaa agtgcagata atcaaacggc agtgcaacaa catatggcgc
    11101 aaattatgtc tgacatcgat aatagcattc atcgcacggc gcgttatttg caaagtaaca
    11161 caatagacta cgcagaggat cgctatatcg tttcagaaca atctttatat ttaggtcatc
    11221 catttcatcc gactcctaag agtgcaagtg ggttttcaga agcagattta gagaaatatg
    11281 cacccgaatg tcatacgtca ttccaattgc attatttagc tgtgcatcaa gatgttctgc
    11341 tcacgcgcta tgtagaaggt aaagaagatc aggttgagaa agtgttgtat caattagcag
    11401 atatagacat atcagagata cctaaagatt ttattttatt accaatacat ccttatcaaa
    11461 taaatgtgtt gcgacagcat ccacagtata tgcaatatag tgaacaaggt ttaataaaag
    11521 accttggtgt ttccggtgat tcagtgtacc cgacgtcttc ggttagaact gtattttcaa
    11581 aagcattaaa catttatttg aaattaccga tacatgttaa aattactaat tttatacgta
    11641 cgaatgacct tgaacaaatt gaacggacaa tcgatgccgc acaagttatc gcatcagtca
    11701 aagatgaggt tgaaacaccc cattttaaat tgatgtttga agaaggatat cgtgcattgt
    11761 taccgaatcc attagggcaa acagttgaac ctgaaatgga tttattaaca aatagtgcca
    11821 tgattgttcg tgaagggata ccgaattacc atgctgataa agatattcat gtattggcgt
    11881 cattatttga aacgatgcct gattcaccga tgtctaagtt atcacaagtg attgagcaaa
    11941 gtggtttagc accagaagca tggcttgaat gttatttgga tcgtacatta ttgccgatat
    12001 taaagctgtt tagtaacaca ggcattagtc tagaagcaca tgtacaaaat acattaattg
    12061 aattaaaaga tggcataccc gacgtatgct ttgtcagaga tcttgaaggc atttgtctat
    12121 ctagaacgat tgctactgaa aaacagcttg tgccaaatgt tgtggcagca tcaagccctg
    12181 ttgtatatgc acatgatgaa gcatggcatc gtcttaaata ttacgttgta gtaaatcact
    12241 taggacattt agtatcaacc attggtaaag cgacaaagaa tgaagttgtg ttatggcaac
    12301 ttgtagcgca tcgtcttatg acttggaaaa aagaatacgc gaataacgca gtatttgttg
    12361 actgtgttga agatttatat caaacgccga ccattgcggc taaagcgaat ttgatgagta
    12421 aattgaatga ttgtggtgca aaccctattt atacacatat accaaatcca atttgtcata
    12481 acaaggaggt atcgtattgt gaatcaaaca attcttaatc gtgtaaagac tagagtgatg
    12541 caccaactgg tatcatcgct tatttatgag aatattgttg tgtataaagc gtcatatcaa
    12601 gacggtgtcg gtcattttac aatagaagga catgattcag agtatcgttt tactgctgaa
    12661 aagacacata gctttgatcg tatacgtatc acatcaccaa ttgagcgtgc cgtaggagat
    12721 gaggtagata ctacaacaga ctatacacaa ttactgagag aggttgtatt tacatttcct
    12781 aaaaatgatg aaaagctaga acaatttatt gtcgagttat tacagacaga actaaaagat
    12841 acgcaaagta tgcagtatcg agaatcaaac ccaccagcaa cacctgagac atttaacgac
    12901 tatgaatttt atgcgatgga agggcatcag tatcatccaa gttacaaatc acgtttagga
    12961 tttacgttga gtgataattt gaaatttggt cctgactttg taccaaacgt taaactgcaa
    13021 tggttagcta tcgacaaaga taaagtagaa acgacggtat caagaaatgt tgtagttaac
    13081 gaaatgttac gtcaacaagt tggcgataag acttatgaac attttgtaca gcaaattgaa
    13141 acgtctggca aacatgtaaa tgatgttgag atgatacctg tacatccatg gcagtttgaa
    13201 catgtcatcc aagttgattt ggctgaagaa aggcttaatg gcacagtact atggttaggg
    13261 gaaagtgatg agctatatca ccctcaacaa tcgattcgta cgatgtcgcc aatagacacg
    13321 acaaaatatt atttaaaggt accaataagt ataacgaata cttcaacgaa acgagtgttg
    13381 gcgcctcata caattgaaaa tgcagcgcaa attacggatt ggttaaagca gatacagcaa
    13441 caagatacgt atttaaaaga tgaattaaag acagcttttc taggggaagt cttaggacag
    13501 tcttatttaa atacacaact ttcgccttat aaacaaactc aagtttatgg tgcgttaggt
    13561 gttatatggc gtgaaaatat atatcatatg ttaatcgatg aagaggatgc gataccattt
    13621 aatgcacttt atgcgagtga taaggattgt gtaccattca ttgaaaattg gattaaacaa
    13681 tatggttctg aagcttggac aaagcaattt ttagctgtag cgattcgtcc aatgattcat
    13741 atgctttatt atcacggtat tgcctttgaa tcgcatgcac aaaatatgat gctcattcat
    13801 gaaaatggtt ggcctacacg tattgcctta aaagatttcc atgatggtgt tcgttttaag
    13861 cgtgagcatt taagtgaagc tgcttcacac ctgacattaa agccaatgcc agaagcacat
    13921 aaaaaagtga atagtaattc atttattgaa acagatgacg aacgtttagt acgcgacttt
    13981 ttacatgatg catttttctt tattaatatc gccgaaatca tcttatttat tgaaaagcaa
    14041 tatggtatcg atgagaaact gcaatggaaa tgggttaaag gcatcatcga ggcgtatcaa
    14101 gaagcatttc cagagttgaa taactatcaa catttcgatt tgtttgaacc tacgattcaa
    14161 gttgaaaagt taacgacacg tcgattatta agtgactccg agttaagaat tcatcatgtt
    14221 acaaatccat taggtgtagg aggtattact gatgcaacaa ctatctctga aacatagatt
    14281 aaacaatggt gattcagttt atggcatttt taattctata ccggacccat taatgataga
    14341 ggttatcgca gcaagcgggt atgactttgt tgtgattgat acagaacacg tggcgattaa
    14401 tgatgagaca ctagcgcatt taattcgtgc agctgaagca gcgcatatta taccaattgt
    14461 acgtgtcact gcagtgatag atagagatat cattaaagtg ttggatatgg gtgcgagagg
    14521 tattattgtg ccacacgtta aagatcgtga gacagttgag catattgtga aattaagtcg
    14581 ttattacccg caaggattaa gaagtttgaa tggtggtcgc atggcaagat ttggacgtac
    14641 accattactt gatgcaatgg agatggctaa tgagcatatt atggtgattg ccatgataga
    14701 agatgttgaa ggggttatgg ccattgacga tatagcacaa gtcgaaggtt tagacatgat
    14761 agtcgaaggt gccgcagatt tatcccagtc acttggcata ccatggcaaa cgcgtgatga
    14821 tcaagtaaca tcacatgttc aacatatttt tgaagttgtg aatgcacatg gtaaacattt
    14881 ttgtgcatta ccacgtgaag atgaagatat tgcaaaatgg caggcacaag gtgtacaaac
    14941 atttatttta ggtgatgatc gtggaaaaat atatcgccat ttaagtgcat ctctagcgac
    15001 gtctaaacag aagggggatg aagactaatg cgtatagttc aacccgttat tgaacaatta
    15061 aaagcacaat ctcatccagt ttgtcattat atctatgatt tagtcggact ggaacatcat
    15121 ttgcaacata ttacatcgtc attgcctagt aattgtcaga tgtactatgc aatgaaagca
    15181 aatagtgaac gaacaatact agatacaatt agtcagtatg ttgaaggatt cgaagttgca
    15241 tctcaaggtg aaatagcaaa aggtcttgct tttaaaccag caaatcatat tatttttggt
    15301 ggtcctggta agacagacga ggaactaaga tatgcagtaa gtgaaggtgt tcagcgtatt
    15361 catgttgaaa gtatgcatga attacaacgg ctaaatgcca tcttagaaga tgaagataag
    15421 acacaacaca ttttattgcg tgttaattta gcaggaccat ttcccaatgc aacgttgcat
    15481 atggcaggac gcccaacaca atttggtatt tctgaagacg aagttgatga tgtcattgaa
    15541 gctgcgctag caatgccaaa tattcatcta gatggatttc attttcattc tatttctaac
    15601 aatttagact cgaatttaca tgtcgatgta gtgaaacttt attttaaaaa agcaaaggca
    15661 tggtctgaaa aacatcgatt tccactcaaa catatcaatc ttggtggtgg tataggggtt
    15721 aactatgcag atttaactag ccaatttgag tgggataatt ttgtagaaaa ttttaaaaca
    15781 cttatcgttg agcaagaaat ggaagatgtg acattgaact ttgaatgtgg gcgctttatt
    15841 gtggcacata ttggttacta tgtgacagaa gtgctagata ttaagaaagt acatggtgct
    15901 tggtatgcca ttttaagagg aggtacgcaa caatttagac tgccggtatc ttggcagcat
    15961 aaccatcctt ttgacattta tcgctataag gacaatccat attcatttga aaaagtttca
    16021 atttcgaggc aggacacaac gttagtcggt caattatgta caccgaaaga tgtctttgct
    16081 agagaagtac agatagatgc aatcagtaca ggcgacgtta ttgttttcaa atatgcaggt
    16141 gcatacggat ggtctatttc acatcacgat ttcttaagcc atccacatcc tgaatttatt
    16201 tatttaacgc aaacaaagga ggatgaataa ctattgaatc atattcatga acatttaaaa
    16261 ttggtaccag tagataagat tgatcttcac gaaacattcg aacctttaag attggaaaag
    16321 acgaaaagta gtattgaagc agatgatttt atacgtcatc ctattttagt gacagcgatg
    16381 caacatggaa gatatatggt tatagatggt gtgcatcggt atacaagttt gaaagcgtta
    16441 ggatgtaaga aagttccagt gcaagaaatc catgaaacac aatattcaat tagtacgtgg
    16501 caacataaag ttccatttgg tgtgtggtgg gaaacgttac aacaagaaca tcgcttgcca
    16561 tggactactg agacaagaca agaagcgcca tttattacga tgtgtcatgg ggatacagaa
    16621 caatatttgt atacaaaaga tttaggcgaa gcacattttc aagtatggga aaaggttgtc
    16681 gcaagttata gtggttgttg ttctgtagag agaattgcac aaggtacata tccttgtctt
    16741 tctcaacaag atgtactcat gaagtatcag ccattgagtt ataaggaaat tgaagcggtt
    16801 gttcataaag gggaaactgt gccagcaggt gtgacacgct ttaatatttc aggacgatgt
    16861 cttaatcttc aagtaccact ggcattactt aaacaagatg atgatgttga acaactgcgc
    16921 aattggaagc agtttttagc agataagttt gccaatatga gatgctatac tgaaaaagta
    16981 tacttggtgg agcaatagtt ttactgtgat gttgagggaa atatgatgat ttagcgtatt
    17041 gatagcgaaa atataa
//
LOCUS       DALMNS010000063        17003 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.063, whole genome shotgun sequence.
ACCESSION   DALMNS010000063 DALMNS010000000
VERSION     DALMNS010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 17003)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17003)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17003
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.063"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(426..1580)
                     /locus_tag="O6Y56_001692"
     CDS             complement(426..1580)
                     /locus_tag="O6Y56_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDB5574946.1"
                     /translation="MKLSLNSNSKYLRAPSIRQFSNRMKGLDDCVNLTIGQPDFPMPD
                     VVKKAYVDAINNDKTSYSHNKGLLETREAISQYFKNRYHFSYDPEEIIVTNGASEAID
                     TTLRSIIEPGDEIIIPGPIYAGYIPLIEVLGGKPIYIDTTATQFKITPDALESHISPK
                     TKAVLLNYPTNPTGVVLKRNEVLNIVNVLKKYPIFIISDEIYAENTFSGKHVSFAEFE
                     DIRDQLILIGGLSKSHSATGIRIGFLLGPQYLIDKLTFMHAYNCICANVPAQIACITA
                     LNEGLEAPKYMNEAYVERRNYLVSELTKLGFEITAQPEGAFYIFPSIKHITDDDFEFC
                     VDLLESTHLAIVPGSSFTEFGKGFVRISYAYEMDVLKEGMKRLAKYLNTK"
     gene            complement(1776..2786)
                     /locus_tag="O6Y56_001693"
     CDS             complement(1776..2786)
                     /locus_tag="O6Y56_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HDB5574947.1"
                     /translation="MTSLKERDYFFDNARAILILLVVFGHMLQPYTSGDKYLSALYLV
                     IYSFHMPTFLFISGYFAKNIDKPYYLEKISKRLIVPYMIFFAFFSIYYFLTGKSDELQ
                     IDPFNPVFALWFLITLFFFHVILVIVRRFNPYKVLSVSIIISIGAGFSDNIDSYLSIS
                     RTIVFFPIFYLGYIFTKKHTAIFKNKKLIPVSIITFILFFIIYVIHPINADWLLGSSP
                     YTSLENEGQSVFSPFKRLILYGIILIAMTAFLNLMSTKKKLYTYIGSRTLYVYLLHGL
                     IIGIVRGFEWYPFDNPISLMTYLYLISISVIIVYVLSTNFVCKWTNPIINLQRPSQFK
                     DS"
     gene            2939..3358
                     /locus_tag="O6Y56_001694"
     CDS             2939..3358
                     /locus_tag="O6Y56_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDB5574948.1"
                     /translation="MYKQLEKLITLTNNDLNLVNRRFGQRTDITSEQLELLRILFNYD
                     RLSQYDLTMKISREQSIVSRWIKKLVLKGYITSQQSSEDLRCKELILTDQARTLISQI
                     NNARCELIEARCQCLSEVELDNLNQLLDKLNQRRISL"
     gene            3385..3495
                     /locus_tag="O6Y56_001695"
     CDS             3385..3495
                     /locus_tag="O6Y56_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574949.1"
                     /translation="MSLCTQQKLNHELQAKVAVIVKIDGKQSPLFLLVYV"
     gene            complement(3566..7330)
                     /locus_tag="O6Y56_001696"
     CDS             complement(3566..7330)
                     /locus_tag="O6Y56_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HDB5574950.1"
                     /translation="MAKKFNYKLPSMVALTLVGSAVTAHQVQAAETTQDQTTNKNVLD
                     SNKVKATTEQAKAEVKNPTQNISGTQVYQDPAIVQPKTANNKTGNAQVSQKVDTAQVN
                     GDTRANQSTTTNNTKPVAKSTSTTAPKTNTNVTNAGYSLVDDEDDNSENQINPELIKS
                     AAKPAALETQYKAAAPKAATTTAPKAKTEATPKVTTFSASAQPRSVAATPKTSLPKYK
                     PQVNSSINDYIRKNNLKAPKIEEDYTSYFPKYAYRNGVGRPEGIVVHDTANDRSTING
                     EISYMKNNYQNAFVHAFVDGDRIIETAPTDYLSWGVGAVGNPRFINVEIVHTHDYASF
                     ARSMNNYADYAATQLQYYGLKPDSAEYDGNGTVWTHYAVSKYLGGTDHADPHGYLRSH
                     NYSYDQLYDLINEKYLIKMGKVAPWGTQSTTTPTTPSKPSTPSTPSTGKLTVAANNGV
                     AQIKPTNSGLYTTVYDKTGKATNEVQKTFAVSKTATLGNQKFYLVQDYNSGNKFGWVK
                     EGDVVYNTSKSPVNVNQSYSIKPGTKLYTVPWGTSKQVAGSVSGSGNQTFKASKQQQI
                     DKSIYLYGSVNGKSGWVSKAYLVDTAKPTPTPKPSTPTTNNKLTVSSLNGVAQINAKN
                     NGLFTTVYDKTGKPTKEVQKTFAVTKEASLGGNKFYLVKDYNSPTLIGWVKQGDVIYN
                     NAKSPVNVMQTYTVKPGTKLYSVPWGTYKQEAGAVSGTGNQTFKATKQQQIDKSIYLY
                     GTVNGKSGWVSKAYLAEPVAPKKAVAQPKTAVKAYAVTKPQTTQTVSKIAQVKPNNTG
                     IRASVYEKTAKNGAKYADRTFYVTKERAHGNETYVLLNNTSHNIPLGWFNVKDLNVQN
                     LGKEVKTTQKYTVNKSNNGLSMVPWGTKNQVILTGNNIAQGTFNATKQVSVGKDVYLY
                     GTINNRTGWVNAKDLTAPTAVKPTTSAAKDYNYTYVIKNGNGYYYVTPNSDTAKYSLK
                     AFNEQPFAVVKEQVINGQTWYYGKLSNGKLAWIKSTDLAKELIKYNQTGMTLNQVAQI
                     QAGLQYKPQVQRVPGKWTDANFNDVKHAMDTKRLAQDPALKYQFLRLDQPQNISIDKI
                     NQFLKGKGVLENQGAAFNKAAQMYGINEVYLISHALLETGNGTSQLAKGADVVNNKVV
                     TNSNTKYHNVFGIAAYDNDPLREGIKYAKQAGWDTVSKAIVGGAKFIGNSYVKAGQNT
                     LYKMRWNPAHPGTHQYATDVDWANINAKIIKGYYDKIGEVGKYFDIPQYK"
     gene            complement(7558..7986)
                     /locus_tag="O6Y56_001697"
     CDS             complement(7558..7986)
                     /locus_tag="O6Y56_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5574951.1"
                     /translation="MFSKVNNQEMLEDCFYIRKKVFVEEQGVPEESEIDESESIHLIG
                     YDNGQPVATARIRPINETTVKIERVAVIKSHRGQGMGRMLMQAVESLAKDEGFYVATM
                     NAQCHAIPFYESLNFKMRGNIFLEEGIEHIEMTKKLTSLN"
     gene            complement(8141..8611)
                     /locus_tag="O6Y56_001698"
     CDS             complement(8141..8611)
                     /locus_tag="O6Y56_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499548.1"
                     /note="Essential protein for resistance to osmotic stress
                     from salt; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotic stress response protein"
                     /protein_id="HDB5574952.1"
                     /translation="MSRKTYEKIANINGMFNMLEQQIIHSQDMAHFRSEFFYVNHEHR
                     ENYEALLIYYKNSIENPIVDGACYILALPEIFNSVDVFESELPFSWVYDENGITETMK
                     SLSIPLQYLVAAALEVTDVNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL"
     gene            complement(8659..9885)
                     /locus_tag="O6Y56_001699"
     CDS             complement(8659..9885)
                     /locus_tag="O6Y56_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenyl-teichoic acid--peptidoglycan
                     teichoic acid transferase"
                     /protein_id="HDB5574953.1"
                     /translation="MNKFLKYFLILLALVLIVVPIVFATLLFKTSQDAFESSQDSKNA
                     NRQSNLRDNKVNPEEQPISILFLGIDDNDGRRKKGQDAEHSRSDAMILTTFNQSKHQI
                     RMLSIPRDTISYIPKVGYYDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFV
                     EAVNELGGIYYDVPYDLNEPNTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRG
                     QRQMELIKILFQKAQEVDSIDKLDNVIQIVGKNAKHNLTNSEIKALAKMYLTNDVEIK
                     TAQLKGKDDMLNGIYYYHPSVESIQKYANLLRNDLELSPINDKNDFLDQRVINRYGSL
                     IPLTPLDSSLLRKEQNDTTDKDKSSNNTDDSNNSNNNNGVNNQQQPTTGQNTNQDQGN
                     IQQTPQASNNQNGVVN"
     gene            10334..11527
                     /gene="fmtA"
                     /locus_tag="O6Y56_001700"
     CDS             10334..11527
                     /gene="fmtA"
                     /locus_tag="O6Y56_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acid D-Ala esterase FmtA"
                     /protein_id="HDB5574954.1"
                     /translation="MKFNKVKLVIHVCVLLFIIISIALIFHRLQTKTHSIEPIHKETK
                     LSDNEKYLVDRNKEKVAPSKLKEVYNSKDPKYKKIDKYLQSSLFNGSVAIYENGKLKM
                     SKGYGYQDFEKGIKNTPNTMFLIGSAQKFSTGLLLKQLEEEHKININDPVSKYLPWFK
                     TSKPIPLKDLMLHQSGLYKYKSSKDYKNLDQAVKAIQKRGIDPKKYKKHMYNDGNYLV
                     LAKVIEEVTGKSYAENYYTKIGDPLKLQHTAFYDEQPFKKYLAKGYAYNSTGLSFLRP
                     NILDQYYGAGNLYMTPTDMGKLITQIQQYKLFSPKITNPLLHEFGTKQYPDEYRYGFY
                     VKPTLNRLNGGFFGQVFTVYYNDKYVVVLALNVKGNNEVRIKHIYNDILKQNKPYNTK
                     GVIVQ"
     gene            complement(12064..12342)
                     /gene="qoxD"
                     /locus_tag="O6Y56_001701"
     CDS             complement(12064..12342)
                     /gene="qoxD"
                     /locus_tag="O6Y56_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit IV"
                     /protein_id="HDB5574955.1"
                     /translation="MKHTVGFIASIVLTLLAVYVTLYTSLTFHAKLTIIFGFAFVQAG
                     LQLLMFMHLTEGKDGRLQTFKVIFALVITLCFVVGTYWVMQGGHSSHL"
     gene            complement(12351..12956)
                     /gene="qoxC"
                     /locus_tag="O6Y56_001702"
     CDS             complement(12351..12956)
                     /gene="qoxC"
                     /locus_tag="O6Y56_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit III"
                     /protein_id="HDB5574956.1"
                     /translation="MSHDTNTIDSRTHEGELNKLGFWIFITAEFALFGTLFATLLTLQ
                     HGGDYAGKMTTELFELPLVLIMTFALLFSSYTCGIAIYYMRQEKQKLMMFWMIITLLL
                     GLVFVGFEIYEFAHYASEGVNPTIGSYWSSFFILLGTHGCHVSLGIVWAICLLIQIQR
                     RGLDKYNAPKLFIVSLYWHFLDVVWVFIFTAVYMIGMVYSG"
     gene            complement(12946..14934)
                     /gene="qoxB"
                     /locus_tag="O6Y56_001703"
     CDS             complement(12946..14934)
                     /gene="qoxB"
                     /locus_tag="O6Y56_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001010769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit I"
                     /protein_id="HDB5574957.1"
                     /translation="MNFPWDQLLVKGNWMITMAQIGAPFLVIGLIAVITYFKLWKYLY
                     KEWFTSVDHKKIGIMYLICAVLMFVRGGIDALLIRAQLTVPDNKFLESNHYNEIFSTH
                     GVIMIIFMAMPFIFGLWNIVVPLQIGARDVAFPVLNNVSFWLFFAGMILFNLSFIIGG
                     SPAAGWTNYAPLAGEFSPGPGVNYYLIAIQISGLGTLATGINFFVTILRCKTPTMKFM
                     QMPMFTVTTFITTLIVILAFPPLTVALALMTTDRIFDTAFFTVAHGGMPMLWANFFWV
                     WGHPEVYIVILPAFGIYSEIIPTFARKRLFGHQSMVWATAGIAFLSFLVWVHHFFTMG
                     NGALINSFFSISTMLIGIPTGVKLFNWLLTLYKGRITFESPMLFSLAFIPNFLLGGVT
                     GVMLAMASADYQYHNTYFLVAHFHYTLVTGVVFACLAGLIFWYPKMMGYKLNETLNKW
                     CFWFFMIGFNVCFLPQFILGLDGMPRRLYTYMPSDGWFLLNLISTIGALLMAIGFLFL
                     VVSIVYSHFKSPREATGDNWDGLGRTLEWTTASAIPPKYNFAITPDWNDYDTFVDMKE
                     HGRHYLDNHNYKDIHMPNNTPVGFWIGIFMTIGGFFLIFETVIPALICLFGIFGTMIY
                     RSFQIDHGYHIPAAEVAETEARLREARIKEREAVSHES"
     gene            complement(14934..16034)
                     /gene="qoxA"
                     /locus_tag="O6Y56_001704"
     CDS             complement(14934..16034)
                     /gene="qoxA"
                     /locus_tag="O6Y56_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit II"
                     /protein_id="HDB5574958.1"
                     /translation="MSKFKSLLLLFGTLILLSGCSNIEIFNAKGPVASSQKFLILYSI
                     VFMLVICFVVLGMFAIFIYKYSYNKNAESGKMHHNAIIETIWFVIPIIIVAALAIPTV
                     KTLYDYEKPPKSEKDPMVVYAVSAGYKWFFAYPDEHIETVNTLTIPKDRPVVFKLQAM
                     DTMTSFWIPQLGGQKYAMTGMTMNWTLEASQTGTFRGRNSNFNGEGFSRQTFKVNAVS
                     QKDYDKWVKEVKGKKTLDQDTFDKQLLPSTPNKALEFNGTHMAFVDPAADPEYIFYAY
                     KRFNFELKDPNFTSEENMFKDVSDKPLIPARKAQITNANYKRHGMKLMILGNDEPYNN
                     EFKKDESKNAKEMKKISKDAQDQDNDDHGGGH"
     gene            16339..16446
                     /locus_tag="O6Y56_001705"
     CDS             16339..16446
                     /locus_tag="O6Y56_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574959.1"
                     /translation="MERKRKHFNKEFAKSNLSLNNEKRKFVCSKSKHSF"
     gene            complement(16607..16924)
                     /locus_tag="O6Y56_001706"
     CDS             complement(16607..16924)
                     /locus_tag="O6Y56_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5011 domain-containing protein"
                     /protein_id="HDB5574960.1"
                     /translation="MNKLLQSLSALGVSATLVTPNLNADATTNTTPQIKGANDIVIKK
                     GQDYNLLNGISAFDKEDGDLTDKIKVDGQIDTSKSGKYQIKYHVTDSDGAIKISTRYI
                     EVK"
BASE COUNT         5660 a         2632 c         2804 g         5907 t
ORIGIN      
        1 gagtttacaa aaacattaag ggaattaaaa ttgaattgta ttatacttta ttcgattgag
       61 ttaaattgat aaggttgtca attgtttgca tttatctaaa agaataaata agaaaggaat
      121 tgagagcgaa gggaaagtat ttgtttataa taataaatag taacttttga ataataattg
      181 tttggccaaa ggtagattaa tatgaatggt gatatattat ttgagtgctt aagtttcgaa
      241 gaacaattat aagttagcat attaaaatct tttgatagaa tcattttgag tgaggtgttt
      301 aaaggagagg aatataactc ggtagtattt acagtctctt tagagtatta tttaaaactt
      361 atagaatata aaaaactgaa cgtactatga atttagttca cgacgtccag ttcaacatat
      421 catttttatt tagtatttaa atatttagca agtctcttca taccttcttt taaaacatcc
      481 atttcataag cataggaaat cctcacaaat cctttaccga attctgtaaa ggatgagcct
      541 ggaacgattg ctaaatgtgt tgattcaagt aaatcaacac aaaattcgaa atcgtcgtcg
      601 gtaatatgtt taatactagg aaaaatataa aatgcgcctt caggttgagc tgtaatctca
      661 aaacctaatt tagttaattc ggaaactaaa taatttctgc gttctacata agcttcgttc
      721 atatatttag gagcttctaa tccttcgtta agtgctgtta tacatgctat ttgagctgga
      781 acattggcac aaatacaatt ataggcgtgc ataaatgtta atttatcaat caaatattga
      841 ggtcctaata gaaaaccaat tcttattccg gttgctgagt gtgatttact taaaccacca
      901 attaatatta attgatcacg aatgtcttca aattcagcga aggatacatg tttaccacta
      961 aatgtatttt cagcataaat ctcatcgcta attataaata tcggatattt ttttaataca
     1021 tttacgatat ttaaaacttc atttcttttt aaaactacgc cagttggatt agtcggataa
     1081 tttaacaaga cagcttttgt ctttggagaa atatgacttt ctaacgcatc aggtgtaatt
     1141 ttgaattgtg ttgctgttgt atcaatataa attggtttac cacctagtac ttcgatgagt
     1201 ggtatgtagc ctgcataaat tggtcccggt attataattt catctccagg ctctatgata
     1261 gaacgtaacg ttgtgtctat tgcttcactt gctccatttg tcacaataat ttcttcagga
     1321 tcataggaaa aatgataacg atttttgaag tattgactaa ttgcttcgcg agtttctaat
     1381 aaccctttat tgtgagagta tgatgtcttg tcattgttaa tagcatcaac atatgccttt
     1441 ttcacaacat caggcatcgg gaagtctggt tggccaatag ttaaattaac acaatcatca
     1501 agtcctttca tgcggtttga aaattggcga atacttggtg ctcttaaata tttagaatta
     1561 gaatttaaag aaagtttcat ttgtgacacc tcaaatataa atcaaatatt gtctaaaaat
     1621 ttagaaatta ataatatcat aacatacttt taaagcaaaa aagggtaaat tacttaagct
     1681 ttatttgaaa aacgaaaaat gtctaaatac actgtagtaa ctacttttca aaatgaatga
     1741 agtggttaca gttaatgtac ttagacatta tataattatg agtctttaaa ctgtgatggt
     1801 ctttgtaaat taattattgg atttgtccat ttacaaacaa agtttgtaga taatacatat
     1861 acgatgatta cagatatact tattaaataa agatacgtca ttaatgaaat aggattatcg
     1921 aatggatacc attcaaatcc tctaacaatg ccaataatta aaccatgtaa taaatatacg
     1981 tatagcgtac gactaccaat ataagtatat aattttttct ttgttgacat taaatttaga
     2041 aacgcagtca ttgcgattaa tataattcca tataatataa gtcgtttaaa aggactgaat
     2101 acactctgtc cttcattttc aagtgaagta tatggtgaac ttcctaataa ccaatctgca
     2161 ttgataggat gaatcacgta aatgataaaa aacaaaataa aggtaatgat agatactggt
     2221 attagttttt tatttttaaa aatagccgta tgttttttgg taaaaatgta acctaggtaa
     2281 aatattggga aaaatacgat tgtccttgaa atgcttaagt agctatcgat gttatctgaa
     2341 aaacctgctc caatagatat aataattgaa actgatagca ctttatatgg attaaatctt
     2401 ctaactatta ctaaaatgac atgaaagaaa aatagcgtga tcaaaaacca taacgcaaat
     2461 actgggttaa aaggatcaat ttgtaattcg tcacttttac ctgttaagaa ataatatatt
     2521 gaaaagaatg caaaaaatat catataaggt actatcaaac gttttgaaat tttttctaaa
     2581 tagtatggtt tatcaatatt tttcgcgaaa taaccagata taaacaaaaa tgttggcata
     2641 tgaaaactat aaataactaa gtataatgct gataaatact tatcgccact agtgtagggt
     2701 tgtaacatat gtccaaatac gactaataat attaaaattg ctcttgcgtt gtcaaaaaaa
     2761 taatctctct cttttaatga agtcatattt tatctccttt atgtccataa gactcttact
     2821 aatttattat attttgtatt agttatgcaa caaatttgtc tattgtgtcg aatagtattg
     2881 taaaaattat aaaaaaagca tataatatta taaataatat gtagtggagt agaacaacat
     2941 gtataaacaa cttgaaaaac ttattacact gactaacaat gacttaaact tagtgaatag
     3001 aagatttgga caacgcacgg atatcacatc tgaacagcta gaacttctcc gtattttatt
     3061 taattacgat cgcttatcac agtatgattt gacgatgaag attagcaggg aacaatctat
     3121 agtttcaagg tggattaaga aattagtttt gaaagggtac atcacaagtc aacaatctag
     3181 cgaagattta agatgtaaag aattaatttt gactgatcaa gcacgtacat tgatttcaca
     3241 aataaataat gcacgttgcg aattgattga agcaagatgt caatgtttat cggaagtcga
     3301 attagacaat ttaaatcaat tacttgataa gttaaatcaa cgacgcatat cgttgtaaca
     3361 cggcaatagc aaacacataa tttagtgtca ttgtgcacac aacaaaaatt gaatcatgaa
     3421 ttacaagcaa aagtagcggt gattgttaaa attgatggta aacaatcacc gctatttttg
     3481 cttgtgtatg tataaaaaag ggatcaaagg tcatccccca tgattgatag tggggggatg
     3541 acttttgatc ctatgttcat gttgcttatt tatattgtgg gatgtcgaag tatttgccga
     3601 cttcgccaat tttatcatag tagcctttga tgattttagc attgatgtta gcccaatcta
     3661 catctgttgc atattggtgt gttcctggat gtgcaggatt ccatctcatt ttgtaaagcg
     3721 tattttgacc agcttttaca tatgagttgc cgatgaattt agcaccacca acgattgctt
     3781 ttgatactgt gtcccaacca gcttgtttag catatttaat accttcacgt aaaggatcgt
     3841 tatcatatgc agcaatacca aatacgttat ggtatttcgt gttagagtta gttacaactt
     3901 tgttgttcac aacatctgca ccttttgcta attgagaagt accgttacct gtttctaata
     3961 gggcatgtga gataagataa acttcattaa tgccatacat ttgagcagct ttgttaaatg
     4021 cagcaccttg gttttctaat acacctttac cttttaagaa ttgattaatt ttatcaatag
     4081 aaatattttg tggttggtct aagcgtaaga attgatattt taatgctgga tcttgagcta
     4141 aacgcttcgt atccattgca tgcttaacat cattaaagtt agcatcagtc cacttacctg
     4201 gtacacgttg tacttgtggt ttatattgta aaccagcttg tatttgagca acttggttta
     4261 atgtcatacc tgtttgatta tacttaatta attctttagc taaatcagtt gatttaatcc
     4321 atgctaattt accgttagat aatttaccat agtaccaagt ttgtccatta atgacttgtt
     4381 ctttaacaac tgcgaatggt tgttcattaa atgcttttaa tgagtattta gctgtatcag
     4441 aatttggtgt tacatagtaa taaccattac catttttaat tacataagtg tagttataat
     4501 ctttggcagc tgatgtagtt ggtttaacag cagttggtgc agttaaatct tttgcattta
     4561 cccaaccagt gcggttatta atagtaccgt ataaataaac atctttgcct acagatactt
     4621 gtttcgttgc attaaatgta ccttgagcaa tgttattgcc tgttaaaatg acttggtttt
     4681 tagtacccca aggaaccatt gataagccgt tatttgattt attaacagta tatttttgag
     4741 tcgttttaac ttctttgcct aagttttgaa catttaagtc ttttacattg aaccaaccta
     4801 atgggatgtt atggcttgta ttgtttaata atacatacgt ttcattacca tgagcacgct
     4861 cttttgttac atagaacgtg cggtctgcat atttcgcacc gtttttcgct gttttttcat
     4921 aaacagaagc acgaatacca gtgttgtttg gtttaacttg agcaattttg ctaactgttt
     4981 gagtcgtttg tggtttagta acagcataag cttttacagc tgtttttggt tgtgctacag
     5041 cttttttagg tgcaacaggt tcagctaaat atgctttact tacccaaccg gatttaccat
     5101 ttacagttcc atataaatag atagatttat caatttgttg ttgcttagtc gctttaaaag
     5161 tttggttacc tgtaccagat accgcaccag cttcttgttt ataagtaccc caaggtactg
     5221 aatataattt agtgccgggt tttactgtat atgtttgcat tacatttaca ggtgattttg
     5281 cattgttata aataacgtca ccttgtttaa cccaaccaat taaagttgga ctattgtaat
     5341 ctttaactaa gtagaatttg tttccaccta gacttgcttc ttttgttaca gcaaatgttt
     5401 tttgaacttc tttcgttggc ttaccagttt tgtcataaac tgtagtgaat aagccattgt
     5461 ttttagcatt aatttgagca acaccgttta atgatgaaac tgttaattta ttatttgttg
     5521 taggtgttga tggcttaggt gttggtgtag gtttagcagt atcaactaaa tatgctttac
     5581 ttacccaacc agatttacca ttcacagagc catataaata aattgattta tcaatttgtt
     5641 gttgctttga agccttaaat gtttggttac cagagccaga cacgctacca gcaacttgtt
     5701 tagatgtacc ccaaggtact gtataaagtt tcgtaccagg tttgattgaa tatgattgat
     5761 ttacatttac aggtgattta gatgtgttgt aaaccacatc gccttcttta acccaaccaa
     5821 atttattacc agaattgtaa tcttgaacaa gatagaattt ttgattacct aatgtagctg
     5881 ttttagatac agcaaatgtt ttttgaactt cattagttgc tttaccagtt ttgtcgtaaa
     5941 cagtagtata taagccacta tttgtcggtt taatttgagc aacaccattg tttgcagcaa
     6001 cagttaattt accagttgat ggtgtcgacg gtgttgatgg ttttgatggt gtagtagggg
     6061 tagttgtaga ttgtgtgccc caaggcgcaa ctttccccat tttaattaaa tatttttcat
     6121 taattaagtc atatagttga tcataactat aattatgact tcttaaatat ccatgtggat
     6181 cggcatggtc cgtaccacct aaatatttac ttacagcgta gtgagtccat actgtaccat
     6241 ttccatcata ttcagcacta tcaggtttca aaccataata ttgcaattgt gtagctgcat
     6301 agtcagcata gttattcatt gaacgtgcaa atgaagcata atcgtgtgta tgaacgattt
     6361 caacattgat gaatctagga ttaccgactg caccgacacc ccaagataag taatccgttg
     6421 gtgctgtttc gattatacga tccccatcaa caaatgcatg tacgaatgcg ttttgatagt
     6481 tgtttttcat ataactaatt tcaccattta tcgtcgaacg atcattagct gtatcatgaa
     6541 ctacgatacc ttcaggacgc ccaacaccgt tacggtatgc gtatttaggg aagtaagatg
     6601 tataatcttc ttcaatctta ggtgctttta agttattttt acgaatgtaa tcgttaattg
     6661 aagagtttac ttgtggttta tattttggca aactcgtttt tggtgttgca gcaactgatc
     6721 ttggttgtgc tgaagcgcta aaagtagtta ctttaggtgt cgcttcagtt ttagctttag
     6781 gtgctgttgt agttgcagct ttaggtgctg cggctttata ttgcgtttca agagctgcag
     6841 gtttagcagc tgatttaatt aattctggat taatttgatt ttctgaatta tcatcttcat
     6901 catcaactaa actataacca gcatttgtaa cattagtgtt agttttaggt gctgtagtgc
     6961 ttgttgactt tgcaacaggc ttcgtattat ttgtagtcgt tgattgatta gcacgagtgt
     7021 caccatttac ttgtgcagta tcaacttttt gacttacttg agcattgcct gttttgttat
     7081 ttgctgtttt tggttggaca atagcagggt cttgatatac ttgagtgcca gaaatgtttt
     7141 gcgttggatt ttttacctca gcttttgctt gttcagtagt tgctttaact ttattactat
     7201 ctaaaacgtt tttattagta gtttgatctt gtgtcgtctc agctgcttga acttgatgtg
     7261 cagtgactgc tgaacctaca agcgttaatg caaccattga tggtagtttg taattgaatt
     7321 ttttcgccat tctatttatt actcctaaca tttattaatt attactaaca ttatagtacc
     7381 tgttttgtat acctgtgcat atttaaccaa tttgtaatat actcttaatt tatattttca
     7441 ctgtaaaaaa atgaaaaaaa ttttgaatct caatggtgac gtgacaaatc aaatagaatt
     7501 gatgtcaatt taagaattgg tttattacaa atgtttctaa aatagataca acttttttta
     7561 attaagcgag gttaactttt ttgtcatttc aatatgctcg atgccttcct caagaaatat
     7621 attacctctc attttaaagt ttaaactttc ataaaatggg atagcatgac attgggcatt
     7681 catagtagct acgtaaaaac cttcatcttt agctaatgat tctacagctt gcataagcat
     7741 tctacccatt ccttgtccac gatgtgattt tatcacagcc actcgttcta ttttgacagt
     7801 tgtttcatta atagggcgta tacgagctgt ggcaactggc tgtccattat catatccaat
     7861 gaggtgaata gattcagatt catcaatttc actttcctct gggacgcctt gttcttctac
     7921 aaacactttc tttcttatat agaagcaatc ttctaacatc tcttgattgt ttacttttga
     7981 aaacataaaa ttcctccata tcctaacaaa atcatttaca tttaatttac taataataac
     8041 atagaataac gattgttatt ttccacaaaa ataattagac ataaaaaagc tataaagatg
     8101 attcacaaga atcatcttta tagctaatta attattattg ttatagtgct tcttttctaa
     8161 taattgctgt atattgccaa aagattcgca tttgagcaat attccaatta ttcattccca
     8221 ttgtaaaccc agaaggttta aagatgttca catcagttac ttctaaagct gctgcgacta
     8281 aatattgtaa tggaatacta agtgatttca ttgtttcggt aatgccattt tcatcatata
     8341 cccatgaaaa tggtaactct gattcgaaaa catctacact attgaaaatt tcaggtaggg
     8401 ctaaaatata acatgcacca tctacaatag gattctcgat actatttttg taataaatta
     8461 ggagtgcttc atagttttct cgatgctcat gattgacgta aaaaaattca cttctaaaat
     8521 gagccatatc ttggctatga ataatttgtt gttctaacat attaaacatc ccatttatat
     8581 ttgcaatctt ttcgtatgtt tttctactca tgtatgatgc tcctttcata aatagtaaat
     8641 gttaatcgtc atataatatt agtttacaac accattttgg ttatttgaag cttgtggcgt
     8701 ttgttgaata ttaccttgat cttggttagt gttttgaccc gtagtaggtt gttgctgatt
     8761 attgacacca ttgttgttat tactattatt actgtcgtca gtattattcg aagatttatc
     8821 tttatctgtc gtatcgtttt gttcttttct caataaacta ctatctaaag gcgttaatgg
     8881 tattaatgaa ccataacggt tgataacacg ttgatctaag aaatcatttt tatcattgat
     8941 aggtgataat tctaaatcat tacgaagtaa gttagcatat ttttgaatgc tttcaacgct
     9001 tggatgataa tagtaaatac catttaacat atcatcttta ccttttagtt gtgcagtttt
     9061 aatttcaaca tcatttgtta agtacatttt agctaaagct ttaatttcag agttagttaa
     9121 attatgctta gcatttttac ctacaatttg aatcacatta tcaagtttat caatagaatc
     9181 aacttcctgt gctttttgga ataaaatctt aattaattcc atttgacgtt gtccgcgttt
     9241 caagtctgaa tcatgatgtc tagttctagc aactgctaaa gcctcatcac catttaattt
     9301 ttggtaccct tttttaattt taatcttacc agtatcatct gtgttaggtt catttaagtc
     9361 gtacggcaca tcatagtata tgccaccaag ctcatttaca gcctcgacaa atgctttcat
     9421 attgactctc acataataat caacaggtac attcatggta gcttctaccg aatccattgc
     9481 ggcaattgga ccaccatatg catgtgcgtg ggtaatctta tcgtaatagc caactttagg
     9541 aatgtagctg atagtatcac gtggaatact aagcattcta atttgatgtt ttgattgatt
     9601 aaaagtagtt aaaatcatag cgtctgatct agagtgttca gcatcctgtc ctttttttct
     9661 tcttccatcg ttatcatcga tacctaagaa aagaatagag ataggttgtt cttcgggatt
     9721 gactttatta tctcttaagt tggattgacg attagcattt ttgctgtctt gagaagattc
     9781 gaatgcatct tgggacgttt taaaaagtaa cgtagcgaag actattggaa caacaatgag
     9841 aaccaatgct agaaggatca aaaagtattt taaaaattta ttcatgattg atgctcctat
     9901 attaaatttt tgttaaatca taatcataat tttaaaatat aattagttga acgatattta
     9961 tacaacttca ttactaatac attatagcct taaattgtag tactttatag taaaaaatac
    10021 aaatgttatg tcaaagttcc ttgtaatttg aatgttttgt taaaatcaaa aagcattttt
    10081 aaaaatataa tgcgacttta gtatgatgtc ttaaaaaatt taaaggcgta atataaattc
    10141 gagtgattta tacaaagtga taaggtataa ttaattttgt tgtatagata acatattaga
    10201 aaaacttatt actatgtagc gtaaagcata aatgaatgat aaattaattt ttgtaagttg
    10261 tattattagg aagctaggtt caaagtttta actatttaaa tatataatga atacattgtg
    10321 aggctattat caaatgaaat ttaataaagt aaaactagtt atacatgtgt gtgtactatt
    10381 atttatcatt atttctatag cgttaatttt tcatcgatta cagacgaaga cacattctat
    10441 agaaccaata cataaggaaa caaaattatc agacaatgaa aaatatttag tagatcgtaa
    10501 taaggaaaag gttgcgccgt ctaaactaaa agaagtatat aatagcaagg atcctaaata
    10561 taagaaaatt gacaagtatt tacaaagttc attatttaac ggttcagtag ctatatatga
    10621 aaatggcaaa ttgaaaatga gtaaaggtta tggatatcaa gattttgaaa aaggtattaa
    10681 aaacacaccg aatacaatgt ttttaatagg ttcagctcaa aaattttcaa cagggttact
    10741 gttaaaacag ttagaagaag aacataaaat aaatatcaat gatccagtaa gtaaatacct
    10801 tccatggttt aaaacatcta agcctatccc attgaaagat ttgatgttgc atcaaagtgg
    10861 attatataaa tataaatcct caaaagatta taaaaactta gatcaagcag ttaaagcgat
    10921 tcaaaaacgt ggtattgatc ctaagaaata caaaaagcat atgtataacg atgggaatta
    10981 tttagtactt gctaaagtta ttgaagaagt tacaggtaaa tcttatgctg agaattatta
    11041 tacaaaaata ggggatccat taaaacttca gcacacagca ttttatgatg aacaaccttt
    11101 taaaaaatat ctagcaaaag gttatgctta taatagtaca ggactttcgt tcttaagacc
    11161 taatattttg gaccaatact atggtgcagg taatttatat atgacaccaa cagatatggg
    11221 taaattaatt actcaaatac aacaatataa attattcagt cctaaaataa ccaatccatt
    11281 attacatgag tttggtacga aacagtatcc agatgaatat cgatatggtt tttatgttaa
    11341 accaacatta aatcgtttaa atggtggatt cttcggacaa gtctttactg tttactataa
    11401 tgataagtat gtagttgtac ttgcattaaa tgtaaaagga aacaatgaag ttcgaatcaa
    11461 acatatttat aatgatattt taaaacaaaa taaaccttac aatacgaagg gtgttattgt
    11521 tcaataatta atatagaaga tataacatgt atatggcatt aaggcatcga ccttatctga
    11581 ccagtatacg agttatatct tcttttttat agtggtaaaa agtttaaagt ataaggttga
    11641 agaaggatga gtttaaaaat ttgtgttaac tcataaaagt ggaaaacatt tgatgagctg
    11701 gcatcaaact aaaatgaatg aagacgaata cgttggtcca tgcgtggtct gaatgttttc
    11761 taaatctaac tggaaatgat aatttaataa tctacatgtt tgattgttta aacatgtaca
    11821 atttttaaaa acctagggat aattttattg aggtgaacaa cattgaaatt atctttagac
    11881 ataaatatgg attttgaagt tactatatta attagttgtg gctgttaatg tattaattga
    11941 attgataata atgattgtct tataagatat agaaggggac ttaaccattt aaaaattgaa
    12001 ggataataaa aaccagctaa caaaagtgtt agctggttaa actttacatt attaaaatgt
    12061 tgtttataag tgtgaagagt gaccgccttg cataacccaa tatgttccga caacgaaaca
    12121 aagtgtaatt acaagagcaa agataacttt gaatgtttgt aaacgtccat ctttaccttc
    12181 agttaaatgc atgaacatta ataattgaag tcctgcttgg acgaatgcaa agccaaagat
    12241 aattgtcaac ttcgcgtgga atgttaatga cgtgtatagt gttacgtaaa ctgctaaaag
    12301 cgttaatacg atagatgcga taaatcctac agtatgtttc attattgtac tcatccgcta
    12361 tacaccatcc ctatcatata tacggcagta aagatgaaaa cccaaacaac atctaagaag
    12421 tgccagtata aacttactat aaataatttt ggcgcattat atttgtctaa tccgcgtcgt
    12481 tggatttgga ttaataaaca aatggcccaa acgataccta gcgatacgtg acaaccatgc
    12541 gttcctaata ggataaagaa actagaccag taagagccaa ttgttgggtt aacgccttct
    12601 gatgcatagt gtgcgaattc ataaatttcg aatccaacaa agactaaacc taaaagtaac
    12661 gtaatgatca tccaaaacat cattaacttt tgtttttctt ggcgcatgta gtaaatagca
    12721 ataccacatg tgtaagaact gaataataat gcaaacgtca ttattaaaac aagaggcaat
    12781 tcaaataact cagtagtcat tttacctgca taatcgccac catgttgcaa agttaatagt
    12841 gtcgcaaata gggtaccgaa taacgcaaat tcggctgtaa tgaaaatcca aaagccaagc
    12901 ttatttaatt cgccttcatg tgtgcgtgaa tcaatagtgt ttgtatcatg actcatgact
    12961 tacagcctcc ctttctttaa tacgcgcttc tcttaatcta gcttcagttt cagcaacttc
    13021 agcagcaggg atatgatatc cgtgatcgat ttggaaactg cgataaatca tagtaccaaa
    13081 aataccgaat aaacaaatta atgctggaat tacagtttcg aaaattaaga agaaaccgcc
    13141 gatagtcata aagataccaa tccagaatcc aacaggagta ttgtttggca tatgaatgtc
    13201 tttgtaatta tggttgtcta agtaatgacg accatgttct ttcatatcaa caaatgtgtc
    13261 gtagtcattc caatctggtg taatggcaaa gttgtattta ggtggaattg ctgatgcagt
    13321 agtccactct agagtacgac caaggccatc ccagttatct cctgttgctt cacgtggaga
    13381 tttgaagtga ctgtatacga tactaacaac aaggaataag aatccgattg ccattaataa
    13441 tgcaccgata gttgaaatta agtttaataa gaaccaacca tctgatggca tataagtgta
    13501 taaacgacgt ggcataccat ctaatccaag aatgaattgt ggtaagaaac aaacgttaaa
    13561 tccgatcatg aagaaccaga agcaccattt gtttaatgtt tcgtttaatt tgtaacccat
    13621 catctttgga taccagaaga ttaaaccagc taagcaggca aatacaacac cagtaaccaa
    13681 tgtatagtgg aagtgagcta ctaagaagta cgtattgtga tattgatagt cagcagatgc
    13741 cattgctaac attacacccg taacaccacc taaaaggaag ttagggataa atgctaatga
    13801 gaatagcatt ggtgactcaa atgtaatacg tcctttatat aatgttaata accagttaaa
    13861 caatttcaca ccagttggaa taccaatcag cattgttgaa attgagaaga atgagttgat
    13921 taacgcacca ttacccattg tgaagaaatg gtgaacccaa actaagaaac taaggaacgc
    13981 gataccggca gttgcccata ccatactttg atgtccgaat aaacgcttac gagcgaatgt
    14041 cgggataatt tctgagtaaa taccaaatgc tggaaggata acgatataaa cttcagggtg
    14101 cccccatacc cagaagaagt tagcccaaag cattggcata ccgccatgtg caactgtgaa
    14161 gaatgctgtg tcaaatattc tatcagttgt cattaatgct aacgctactg ttaaaggagg
    14221 gaaagcaaga ataacaatta atgtagtaat aaatgttgtt actgtaaaca ttggcatttg
    14281 cataaacttc atagttggtg ttttacatct taaaattgta acaaagaagt tgatacctgt
    14341 agctaaggta ccaagccctg aaatttgtat agctattaag taatagttaa cacccggacc
    14401 aggactgaat tcacctgcta gtggcgcata gtttgtccaa ccagctgctg gtgaaccacc
    14461 aataataaat gacaggttga ataaaatcat acctgcaaag aatagccaga aacttacgtt
    14521 gtttaatact gggaatgcaa catcacgtgc tccaatttgt aatggaacaa cgatattcca
    14581 taaaccaaag ataaatggca ttgccatgaa gataatcatg attacaccat gtgtactaaa
    14641 aatttcgtta tagtggttag attctaaaaa tttgttatca ggtactgtta attgcgcacg
    14701 aataagtaac gcatcaatac caccacggac gaacattaat acggcacaga ttaaatacat
    14761 aataccgatt ttcttatggt ctacagatgt gaaccattct ttgtaaagat atttccataa
    14821 tttaaagtaa gtaattactg cgattaaacc aataactaag aatggggcac caatttgtgc
    14881 cattgtaatc atccagttac ctttaactag taattgatcc catggaaaat tcattaatgt
    14941 ccacctccat gatcatcatt gtcttgatct tgcgcatctt ttgaaatttt cttcatttct
    15001 ttcgcatttt tcgattcatc tttcttgaac tcattgttat atggttcgtc atttccaaga
    15061 atcatcaatt tcataccatg tcgtttatag ttcgcatttg taatttgagc tttacgagca
    15121 ggtattaatg gtttgtctga tacatcttta aacatatttt cttcactagt gaagtttgga
    15181 tctttcaatt cgaaattgaa acgtttatat gcatagaaga tgtattctgg atcggctgct
    15241 ggatcaacaa acgccatatg tgtaccatta aattctaaag ctttattagg tgtgcttggt
    15301 aataattgtt tatcaaatgt atcttgatct aacgttttct tacctttaac ttctttcacc
    15361 catttgtcgt agtctttttg actaacggca tttactttaa atgtttgacg tgagaatcct
    15421 tcaccattga agttagagtt acgacctctg aacgtaccag tttgagatgc ttctaacgtc
    15481 caattcattg tcatgccagt catggcatat ttttgaccac ctaattgtgg aatccagaaa
    15541 cttgtcattg tatccatagc ttgaagctta aatacaacag gacgatcttt agggattgtt
    15601 aatgtattaa cagtctctat atgttcatct ggataagcaa agaaccattt gtatcctgca
    15661 cttactgcat atactaccat tggatctttc tcactcttcg gtggtttttc gtaatcgtat
    15721 aaagttttaa ctgtaggaat agctaaagca gcaacgatta tgataggtat tacaaaccat
    15781 attgtttcaa tgatggcatt atggtgcatc ttaccagatt cggcattctt attataacta
    15841 tacttgtaaa taaaaatggc gaacatgcca agtacaacga aacaaataac aagcatgaag
    15901 acgattgaat aaagaatcaa gaacttctga ctacttgcta ctggcccttt tgcgttgaaa
    15961 atttctatat ttgaacaacc actaagtaaa attagtgtgc caaataatag aagcaaagac
    16021 ttaaattttg acactttttt gacctcctaa tactacaaat gtagggctta acattaattt
    16081 taagttatta cacaatattt acaagggctt atgggaaaaa aattaataaa attgtatcaa
    16141 aaatgttgat aaatcaaggt gtgacgtggg ttcacacatt tgttaaaatt atgtgtacat
    16201 tttgtgacta atagcgtttt tgaaaaaatt gcttcatatt taaaagggaa gttgagaata
    16261 gctttcaatt aaaggttatt tgaatgaaaa taaaaaaagt ttgaaattgt ctaataaatt
    16321 gaaaatgatg gctagttcat tgaaaggaag cgcaaacatt ttaataagga atttgccaaa
    16381 agtaatttat cgttaaacaa tgaaaagcgg aaatttgttt gttcaaaatc taaacattct
    16441 ttttaaaaag agcagttaag ttttaataat ttgataggta gtcctttggt atacagaaaa
    16501 aatacaatat ttgggttaaa gttgcagatg aagttggaat aacaaataaa atggtagcaa
    16561 aacatgttcg tttgctacca ttttatttgc agtatagtga tgagggctat ttaacctcaa
    16621 tatacctagt ggaaatttta attgcaccat ctgaatcagt gacatgatat ttaatttgat
    16681 atttaccaga tttagatgta tcaatttggc catcgacttt aattttatcg gttaaatctc
    16741 catcttcttt atcaaatgca cttatgccgt ttagaaggtt ataatcttga cctttcttaa
    16801 taacgatatc attagcgcct ttaatttgtg gtgtagtatt cgtcgttgca tctgcattta
    16861 aatttggtgt tactagtgta gcagaaacac cgagggctga taatgactgt aatagtttat
    16921 tcataatgta acctccgaat gataagtcat ttctgagtta gctttactat accttaattt
    16981 atattattta cacatcatac tat
//
LOCUS       DALMNS010000064        16877 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.064, whole genome shotgun sequence.
ACCESSION   DALMNS010000064 DALMNS010000000
VERSION     DALMNS010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16877
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.064"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(212..769)
                     /locus_tag="O6Y56_001707"
     CDS             complement(212..769)
                     /locus_tag="O6Y56_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000606891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HDB5574961.1"
                     /translation="MINFNKTALVLIDLQEGILKMDYAPYTAENVVQNANKLIDVFRK
                     NNSFIVFVRVKFYDGKDALKPNSMVSLPPKEGDDYSRFHHLLDKRDGDFVIDKRQFSA
                     FVGTDLDLQLRRRGIDTIVLGGVATHVGVDTTARDAYQLNYDQYFVTDMMSAQNETLH
                     QFPIDNLFPIMGQTVTTSELLNILN"
     gene            complement(835..2475)
                     /locus_tag="O6Y56_001708"
     CDS             complement(835..2475)
                     /locus_tag="O6Y56_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-keto acid decarboxylase family protein"
                     /protein_id="HDB5574962.1"
                     /translation="MKQRIGAYLIDAIHRAGVDKIFGVPGDFNLAFLDDIISNPNVDW
                     VGNTNELNASYAADGYARLNGLAALVTTFGVGELSAVNGIAGSYAERIPVIAITGAPT
                     RAVEQAGKYVHHSLGEGTFDDYRKMFAHIIVAQGYITPENATTEIPRLINTAIAERRP
                     VHLHLPIDVAISEIEIPTPFEVTAAKDTDASTYIELLASKLHQSKQPIIITGHEINSF
                     HLHQELEDFVNQTQIPVAQLSLGKGAFNEENPYYMGIYDGKIAEDKIRDYVDNSDLIL
                     NIGAKLTDSATAGFSYQFNIDDVVMLNHHNIKIDDVTNDEISLPSLLQQLTDISYTNN
                     ASFPAYHRPTSPDYTVGTEPLTQQTYFKMMQNFLKPNDVIIAEQGTSFFGAYDLALYK
                     NNTFIGQPLWGSIGYTLPATLGSQLADKDRRNLLLIGDGSLQLTVQAISTMIRQHIKP
                     VLFVINNDGYTVERLIHGMYEPYNEIHMWDYKALPAVFGGKNVEIHDVESSKDLQEVF
                     NVINDHPDVMHFVEVKMSVEDAPKKLIDIAKAFSQQNK"
     gene            2667..2768
                     /locus_tag="O6Y56_001709"
     CDS             2667..2768
                     /locus_tag="O6Y56_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574963.1"
                     /translation="MMLQNTIAKKKQARHLMKVYAPVYSKHYLASNN"
     gene            complement(2747..4792)
                     /locus_tag="O6Y56_001710"
     CDS             complement(2747..4792)
                     /locus_tag="O6Y56_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIABC"
                     /protein_id="HDB5574964.1"
                     /translation="MRKKLFGQLQRIGKALMLPVAILPAAGLLLAIGTAIQGEALQHY
                     LPFIQNGGVQNVAKLMTAAGSIIFENLPMIFALGVAIGLAGGDGVAAIAAFVGYIIMN
                     KTMGDFLQVTPKNVTDPASGYASILGIPTLQTGVFGGIIIGALAAWCYNKFYNINLPS
                     YLGFFAGKRFVPIMMATTSFILAFPMALIWPTIQTGLNAFSTGLLDSNTGVAVFLFGF
                     IKRLLIPFGLHHIFHAPFWFEFGSWKNAAGEIIHGDQRIFIEQIREGAHLTAGKFMQG
                     EFPVMMFGLPAAALAIYHSAKPENKKVVAGLMGSAALTSFLTGITEPLEFSFLFVAPL
                     LFFIHAVLDGLSFLTLYLLDVHLGYTFSGGFIDYVLLGVLPNKTQWWLVIPVGLVYAV
                     IYYFVFRFLIVKLKYKTPGREDKQSQAVTASATELPYAVLEAMGGKANIKHLDACITR
                     LRVEVNDKSKVDVPGLKDLGASGVLEVGNNMQAIFGPKSDQIKHEMQQIMNGQVVENP
                     TTMEDDKDETVVVAEDKSATSELSHIVHAPLTGEVTPLSEVPDQVFSEKMMGDGIAIK
                     PSQGEVRAPFNGKVQMIFPTKHAIGLVSDSGLELLIHIGLDTVKLNGEGFTLHVEEGQ
                     EVKQGDLLINFDLDYIRNHAKSDITPIIVTQGNITNLDFKQGEHGNISFGDQLFEAK"
     gene            5377..6432
                     /locus_tag="O6Y56_001711"
     CDS             5377..6432
                     /locus_tag="O6Y56_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000145567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF871 domain-containing protein"
                     /protein_id="HDB5574965.1"
                     /translation="MTGFSVYLGQPLDEAYIKRMIKQGYQMIFTSVQIPEEDDETKYH
                     YFTKLLNLLKHEQVTYLIDANPSILTPSFYKHLRQYDAQFMIRIDHSTSIEAIEAIMA
                     QGLKCCLNASIISRELLTSLHQQLNDFTLLSFCHNYYPRPDTGLSVDLVNKKNELIYQ
                     FNPKAQIYGFIVGSGLRGPLHKGLPTIEATRHSHPVVAAKLLQETGVSEVLVGDSLIE
                     MRQAKQLIDFCKHRHFTLCIEEVFDTTVTYLFDMCHKVRPDNPENVIRSETSRQICPH
                     SIQPQFTTQRRIGSVTVDNLNNGRYQGEMQIVRQTLSAHDNVNVVAQIIKEDLPLLSC
                     IEPNDTFDFQKTRECKK"
     gene            6432..7328
                     /gene="murQ"
                     /locus_tag="O6Y56_001712"
     CDS             6432..7328
                     /gene="murQ"
                     /locus_tag="O6Y56_001712"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HDB5574966.1"
                     /translation="MENSTTEARNEATMHLDEMTVEEALITMNKEDQQVPLAVQKAIP
                     QLTKVIKKTIAQYKKGGRLIYIGAGTSGRLGVLDAAECVPTFNTDPHEIIGIIAGGQH
                     AMTMAVEGAEDHKKLAEEDLKNIDLTSKDVVIGIAASGKTPYVIGGLTFANTIGATTV
                     SISCNEHAVISEIAQYPVEVKVGPEVLTGSTRLKSGTAQKLILNMISTITMVGVGKVY
                     DNLMIDVKATNQKLIDRSVRIIQEICAITYDEAMALYQVSEHDVKVATVMGMCGISKE
                     EATRRLLNNGDIVKRAIRDRQP"
     gene            7340..8794
                     /locus_tag="O6Y56_001713"
     CDS             7340..8794
                     /locus_tag="O6Y56_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDB5574967.1"
                     /translation="MTKEQQLAERIIAAVGGMDNIDSVMNCMTRVRIKVLDENKVDDQ
                     ELRQIDGVMGVIHDERIQVVVGPGTVNKVANHMAELSGVKLGDPIPHNHNDSEKMDYK
                     SYAADKAKANKEAHKAKQKNGKLNKVLKSIANIFIPLIPAFIGAGLIGGIAAVLSNLM
                     VAGYISGAWITQLITVFNVIKDGMLAYLAIFTGINAAKEFGATPGLGGVIGGTTLLTG
                     IAGKNILMNVFTGEPLQPGQGGIIGVIFAVWILSIVEKRLHKIVPNAIDIIVTPTIAL
                     LIVGLLTIFIFMPLAGFVSDSLVSVVNGIISIGGVFSGFIIGASFLPLVMLGLHHIFT
                     PIHIEMINQSGATYLLPIAAMAGAGQVGAALALWVRCKRNTTLRNTLKGALPVGFLGI
                     GEPLIYGVTLPLGRPFLTACIGGGIGGAVIGGIGHIGAKAIGPSGVSLLPLIADNMYL
                     GYIVGLLAAYAGGFVCTYLFGTTKAMRQTDLLGD"
     gene            8797..9672
                     /locus_tag="O6Y56_001714"
     CDS             8797..9672
                     /locus_tag="O6Y56_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDB5574968.1"
                     /translation="MTNILYRIDKQLSDFTKTEKIIADYILKNPHKIIDMTVNDLADV
                     TNVSTASIVRFSRKMTHQGFQELKIAISRYLPEDIATNPHLELIENESVETLKNKMIA
                     RATNTMRFVATNIMDAQIDAICDVLKNARTIFLFGFGASSLTIGDLFQKLSRIGLNVR
                     LLHETHLLVSTFATHDDRDCMIFVTNQGSHSELQSIAQVATHYSIPIITISSTANNPV
                     AQIADYALIYGRTDENEMRMAATTSLFAQLFTVDILYYRFVALNYHAILDCITQSKMA
                     LDNYRKHLATIDFKH"
     gene            9896..10750
                     /locus_tag="O6Y56_001715"
     CDS             9896..10750
                     /locus_tag="O6Y56_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000422380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574969.1"
                     /translation="MELNEMINFVKENNKIIVTLSLTIFTSVIFPELKSWYSKIINTE
                     NKYRIFDRAIIMIGTVLPMYFLLGFLNYKIYIKLLERPHSEFINTICFSLIGISYGLI
                     LFIAISTYRNYLAIVNRFQLYKMCGNCDYIHPYRFVVNKESTLIKDCFKVGNNDLYEP
                     GSNYKIINLNQTIYGHYEKVESFYQNKNDKIFHIITLNRKNLIRSWLFINNWSIILCR
                     FTMPIVFTLFIFSLSYFDNGIYNAFIPIVIYIFTFVFQSIIFNKIYTENKQLRTQYIQ
                     KLNSGIEV"
     gene            10929..13718
                     /locus_tag="O6Y56_001716"
     CDS             10929..13718
                     /locus_tag="O6Y56_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HDB5574970.1"
                     /translation="MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNER
                     HADKLEGNPLTDKEFQRLLTMIDGKSIFESARILRDKLPLRRDDESEVYLSFLDTKSW
                     CKNKFQVTNQVSVEDTYKARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQN
                     YTGLFRYIQMFIISNGVETRYFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRP
                     CQLAKMISRYMIINETDRILMAMRPYQVYAVESLIQQATETGNNGYVWHTTGSGKTLT
                     SFKASQILSQQDDIKKVIFLVDRKDLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDK
                     SLPLIVTTIQKMAKAIQGNAHLLEQYKTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQ
                     YFGFTGTPRFPENSSQDGRTTADIFGRCLHTYLIRDAIHDGNVLGFSVDYINTFKNKA
                     LKAEDNSMVEAIDTEEVWLADKRVELVTRHIINNHDKYTRNRQYSSIFTVQSIHALIK
                     YYETFKRLNKKLEQPLTVAGIFTFKPNEDDRDGEVPYHSREKLEIMISDYNKKFETNF
                     STDTTNEYFNHISKNVKKGVKDSKIDILIVVNMFLTGFDSKVLNTLYVDKNLMYHDLI
                     QAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRVFSQTNDTDTILMRSYEEYKKEFM
                     DAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAKIILRLKAFDEFEFTIDEIGMD
                     EQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIEMMRNDTINVNYIMNILRQI
                     DLEDKAEQRRNQEQIRRILDHADDPTLRLKRDLIREFIDNVVPSLNKDDDIDQEYVNF
                     ESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKKMIGDLPLKEKRKARK
                     AIESFVAETTEKYGV"
     gene            13923..14786
                     /locus_tag="O6Y56_001717"
     CDS             13923..14786
                     /locus_tag="O6Y56_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000370335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sce7726 family protein"
                     /protein_id="HDB5574971.1"
                     /translation="MDNRNMINRVFSQKILHQIAIKNKSDVVDEAYDFYIQGPKNINV
                     IQKMKSLYNYLKKSYRNEYFYKNTMLNKLLLGRHSVNTTTALSEMPIGESIADFILLN
                     GKGVVYEIKTELDKLDRLDNQINDYYEVFNYVVVITNDKHLNKVMARYKDTTVGILVL
                     TSRNTLSEVQKPKENNSLLNTKAMYNFLRKEERKRVIAQNHMDVPTYNDFTEYDVLFD
                     VFKEIPMTKLHNNMISELKKRGNMKEYKDEFLAAPTEIKFLLYFAKMTKKDKNKLYHF
                     LKDANNPPHFT"
     gene            complement(14992..16584)
                     /locus_tag="O6Y56_001718"
     CDS             complement(14992..16584)
                     /locus_tag="O6Y56_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5574972.1"
                     /translation="MSNLLEVNSLNVQFNYDETTVQAVKNVSFELRKKHILGIVGESG
                     SGKSITAKSILGLLPDYPDHTLTGEIIFNGQSLTNLSTSALQQIRGKDISMIFQDPLS
                     SLNPRLTIGKQITEVLFQHKRVSKSEAKSMTIDILEKVGIKHATQQFDAYPHELSGGM
                     RQRVMIAMALILKPQILIADEPTTALDASTQNQLLQLMKSLYEYTETSIIFITHDLGA
                     VYQFCNDVIVMKDGSVVESGTVESIFKSPQHTYTKRLIDAIPDIHQTRPPRPLNNDIL
                     LKFDHVSVDYTSPSGSLYRAVSDINLAIRKGETLGIVGESGSGKSTLAKTVVGLKEVS
                     EGFIWYNELPLSLFKDDELKSLRQEIQMIFQDPFASINPRFKVIDVIKRPLIIHGKVK
                     DNDDIIKTVVSLLEKVGLDQSFLYRYPHELSGGQRQRVSIARALAVEPKVIVCDEAVS
                     ALDVSIQKDIIELLKQLQLDFGITYLFITHDMGVINEICDRIAVMKNGEIVELNNTED
                     IIKHPQSDYAKQLISEVPVIAK"
     gene            16541..>16877
                     /locus_tag="O6Y56_001719"
     CDS             16541..>16877
                     /locus_tag="O6Y56_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5574973.1"
                     /translation="MNCTFRLLTSNKFDMMLCLPIHKCVNLFYTFVYHSNLLKIILQG
                     VIIIITYLESFKSLYHKAFYKFVLSVLSLPIFLYAVIKFFFSAKRKNFYANNSEISEI
                     EQALHQKYKY"
BASE COUNT         5711 a         2626 c         3134 g         5406 t
ORIGIN      
        1 aaacctaaag tgatacataa ttttgtaata aatactaaat tttttgaaaa ttccggaata
       61 aatactgttt tttatgtagt aagggattag gttaagaacg gtttaacaga tatagaatat
      121 gttaaatata gaaggttaga caacccgacg tattaatact ttgtaaaata aagcccccct
      181 tcaacataat cgaagggggg aaagtgtatg cttagttcaa tatatttagt aattcgcttg
      241 tggttactgt ttgccccatt atagggaata aattatctat tgggaattga tgtagcgttt
      301 cgttttgagc gctcatcatg tcagtaacaa aatactgatc gtagtttaat tgataggcgt
      361 ctcgtgcggt cgtatctaca ccaacatgtg ttgctacacc gccaagaaca atcgtatcaa
      421 ttcctcgacg tctcaactgt aagtctaaat ccgttcctac aaatgcacta aattgtcgct
      481 tgtctatgac aaaatcgcca tctctcttgt ctaataaatg atggaaacga ctgtagtcgt
      541 cgccttcttt tggtggtaat gataccatcg aatttggttt caatgcatct ttaccatcat
      601 agaatttaac acgaacgaat acgataaaac tattgttttt tctgaaaaca tctattaatt
      661 tattagcgtt ttgaacgaca ttttcagctg tatatggggc ataatccatt ttaagaatac
      721 cttcttgcag gtcgattaac actaaagcgg ttttattaaa attaatcatc ttatatcaga
      781 gtccttttcg tttaataaag tattcgctta aacttatacc ctaacgtgat gaaattattt
      841 attttgttgc gaaaaagctt tagcgatatc gatcagtttc tttggtgcat cttcgacaga
      901 cattttgact tcgacaaaat gcatcacatc gggatggtca ttaattacat taaacacctc
      961 ttgtaaatct tttgatgatt caacgtcatg aatttcaaca tttttaccac caaatacagc
     1021 tggtaaagct ttataatccc acatgtgaat ttcattataa ggttcataca tgccgtgaat
     1081 aagtcgttct accgtatagc cgtcattatt aatcacaaat aataccggtt taatatgctg
     1141 tctaatcata gttgaaatag cttgaacagt tagttgcaat gagccatcac caattaacaa
     1201 taagttacga cgatctttgt ctgctaattg tgaacctaat gttgcaggta atgtatagcc
     1261 gatagaaccc cataacggtt gccctataaa agtattgttt ttgtataatg ctaaatcata
     1321 agcaccaaag aatgatgtac cttgttcagc aataatgaca tcatttggtt ttaagaaatt
     1381 ttgcatcatt ttaaaataag tttgttgtgt taatggctct gtgccaacag tataatcagg
     1441 tgatgttgga cgatgataag cagggaacga tgcgttattc gtatatgata tatcggtcaa
     1501 ttgttgtagt aatgatggta gagatatttc atcatttgta acatcatcaa ttttgatatt
     1561 gtgatgattt aacataacga catcatcgat attgaattgg tatgaaaatc ctgctgttgc
     1621 tgaatctgtt aatttggctc caatatttaa aattaaatcg ctgttgtcca cataatctcg
     1681 tattttatct tcggcaattt tcccatcgta aatacccata taatatggat tttcctcatt
     1741 aaaagcacct tttcctaatg aaagttgtgc tactggtatc tgtgtttgat ttacaaaatc
     1801 ttctaattct tgatggaggt gaaaactgtt aatttcatgt ccagtaataa tgataggctg
     1861 cttcgattga tgcaatttag atgctaataa ctctatatat gttgatgcat cagtatcttt
     1921 ggctgccgtt acttcgaatg gtgtcggtat ctcaatttca gagattgcga catcgattgg
     1981 taaatgtaaa tgaactgggc gtctttcggc gattgctgta ttaattaaac gtggtatttc
     2041 ggttgttgca ttttcaggtg tgatataacc ttgtgcaacg attatatgtg caaacatttt
     2101 tcggtagtcg tcaaatgtac cttcaccaag tgagtgatgt acatatttac cggcttgttc
     2161 aacagcacgt gtcggcgcac ctgtaatcgc aatgacaggt atgcgttcag catatgaacc
     2221 tgcgataccg ttgacggcac ttaattcgcc aacaccaaat gtagtaacta atgcagcgag
     2281 tccattaaga cgggcataac cgtccgctgc gtaacttgcg tttaattcat ttgtatttcc
     2341 tacccaatct acattgggat tactgataat atcgtctaga aaagcgagat taaaatcacc
     2401 aggaacacca aaaattttat cgacgcctgc tcgatgaata gcgtcaatta agtaagctcc
     2461 aatgcgttgt ttcataaaaa aaccaccttt tctctatatt tacacttaaa atgatagcct
     2521 cgaatatagt gtaaggtcaa ggaagttgac tttgttgtga aaacgctaac aatagtgagc
     2581 aattaatatt ttttaggaaa tgagtatgaa gggggcttta attgatgatc ttaaaattca
     2641 aaatttaaag ggagagcgaa ctatcaatga tgctgcaaaa cacaatagca aagaaaaaac
     2701 aggcgcgtca ccttatgaag gtatacgcac ctgtttatag taagcattat ttagcttcaa
     2761 ataattgatc gccaaatgaa atgttgccat gttcaccttg tttaaaatca aggtttgtaa
     2821 tgtttccttg tgtaacgata ataggcgtaa tatcactctt tgcatgattg cggatgtagt
     2881 ctaaatcaaa gttgattaat aaatcacctt gtttaacttc ttgaccttcc tcaacatgta
     2941 aagtaaagcc ttctccgttt aatttaacag tgtctaaacc gatgtggatt aatagttcta
     3001 aaccactatc tgatacaaga ccaattgcat gttttgttgg gaaaatcatt tgtactttac
     3061 cgttgaatgg tgcacgaact tcaccttgtg aaggtttgat agcgataccg tcacccatca
     3121 ttttttcgct gaacacttga tcaggcactt ctgataatgg tgttacttca ccagttaatg
     3181 gtgcatgaac gatatggctc aattcgcttg ttgcagattt atcttctgca acaacaacag
     3241 tttcgtcttt atcgtcttcc atagtagtag ggttttctac tacttgacca ttcataatct
     3301 gctgcatttc atgcttgatt tggtcagatt ttggcccaaa aattgcttgc atattgttgc
     3361 cgacttctaa tacaccagat gcacctaaat ctttcaaacc aggaacatca actttagatt
     3421 tatcgttgac ttcaacacgt agacgtgtga tacaagcgtc taaatgttta atgtttgctt
     3481 tgccacccat agcttctaat actgcatatg gtaattcagt tgctgaagca gtaacagctt
     3541 gtgattgctt atcttcacga cctggtgttt tgtattttaa ttttacaatt aagaatcgga
     3601 atacgaagta gtaaatgact gcgtatacaa gacctacagg aataactaac caccattgtg
     3661 tcttattagg tagtacgcca agtaaaacgt agtcgatgaa accacctgag aatgtataac
     3721 ctaagtgaac atccaataag tacaatgtta agaatgataa accatcaagt actgcgtgaa
     3781 taaagaataa taatggtgct acgaataaga atgagaattc taaaggttct gtaataccag
     3841 ttaagaatga tgttaaagca gcagaaccca ttaaacctgc tactactttc ttgttttcag
     3901 gtttagctga gtgataaatt gctaaagctg ctgcaggtaa accgaacatc ataacaggga
     3961 attcaccttg catgaattta ccagctgtca aatgtgcgcc ttcacgaatt tgttcgataa
     4021 agatacgttg gtcaccgtga ataatttcac cagctgcatt tttccatgaa ccaaactcga
     4081 accagaacgg tgcgtggaaa atgtgatgta gaccgaatgg aattaataaa cgcttaataa
     4141 aaccaaataa gaatacggca acaccagtat ttgagtctaa taatcctgta ctgaatgcat
     4201 ttaatcctgt ttggattgtt ggccagatta atgccattgg gaatgctaaa ataaatgatg
     4261 ttgtagccat cataataggt acgaaacgct taccagcgaa gaaacctaaa taagatggta
     4321 agttaatgtt atagaacttg ttataacacc aagctgccag ggccccgata ataataccgc
     4381 cgaacacacc tgtttgtaat gttggaatac ctaaaatgct agcgtaacca ctcgctggat
     4441 cagtaacatt tttaggtgta acttgtaaaa agtcacccat tgttttgttc atgattatgt
     4501 aaccgacaaa tgctgcgata gctgctacgc catcaccgcc agctaatccg attgcgacac
     4561 ctaatgcgaa aatcataggt aagttttcaa aaataatact accggcagct gtcattaatt
     4621 tagcgacatt ttgaacgcca ccattttgta taaaaggcaa gtagtgttgt aatgcttcgc
     4681 cttgtatagc tgtaccgata gctaataaca gacccgctgc tggtaaaatt gcaacaggta
     4741 acattagtgc cttaccaata cgttgcaatt gaccgaaaag ttttttcctc acttgtccaa
     4801 cctccaaagt tgtatttatt atttaagatt caataaaaaa gacacgagca aatagactgt
     4861 gttggtaacc atcacagctt aatttaactc atgcctaatc ttacttagta acacgttggt
     4921 gtatgtaatt aatgtaaaag aagcaattga ctaagtagta tataaaactg atacgttagt
     4981 ttatctagct taccatcaca tcttattgaa tcttatttgt ttgcgactcc tattttagca
     5041 tggtgaagta tgcgttttca atacaattat taaattcaat ttcaaatatc ttaattgttc
     5101 acagattatt attaaaacat aatataagat aatcctgaat aaaatgtata aaagttgttg
     5161 taataatcca gtagtagcag ctattatcat cacttaaaag aaaggataat ctttaatggt
     5221 gtaataatta acttgtgaca aaaatatgta agattattac aatgaacagg ctttaactga
     5281 ttaatattgt aatgtgattt ctcttatagt aaaatgtaag cgattacaca actcaactat
     5341 attttcctaa taattatatt gttaaggagg gctactttga caggcttttc agtgtattta
     5401 ggacaacctt tagatgaagc gtatattaag cgaatgatta aacaaggtta ccaaatgatt
     5461 tttacatctg tacaaatacc agaagaagat gacgagacaa aatatcatta tttcacaaaa
     5521 ctactcaatt tattaaaaca tgaacaagtg acttacctca tagatgctaa tccatctata
     5581 ttaacaccat ctttttataa gcatcttcga caatatgatg cgcaatttat gattcgtatc
     5641 gatcatagta catcaattga ggcaatcgaa gcgataatgg cacagggttt aaagtgctgt
     5701 ttgaatgcaa gtattatttc ccgggaattg ttaacaagct tacatcaaca attgaatgat
     5761 tttacattac tttcattttg tcataactat tatccaagac cagatacggg attatctgtt
     5821 gacttggtca ataagaaaaa tgaactcatt tatcaattta atccaaaggc acaaatatat
     5881 ggttttattg tagggagtgg tttgcgaggt cctttgcata aaggcttgcc aacaattgaa
     5941 gcaacgagac atagtcatcc tgtcgttgca gctaaattat tacaagaaac tggtgtatct
     6001 gaagtgttag ttggagactc attgattgaa atgaggcagg caaaacaact tatagatttt
     6061 tgcaagcata ggcatttcac gttatgtatt gaagaagtgt ttgatacgac agtgacttac
     6121 cttttcgata tgtgtcataa agtacgtccg gataatccgg aaaatgtcat tcgttcggaa
     6181 acgtcaagac aaatatgtcc acattcgatt caaccacagt ttacgacgca acgacgcatt
     6241 ggttcagtaa ccgttgataa tttgaataac ggtcgttatc aaggtgaaat gcaaattgtg
     6301 agacaaacgc ttagtgcaca tgacaatgtg aatgttgttg cacaaattat taaagaagac
     6361 ttaccactgt taagttgtat cgagccgaat gatacatttg attttcaaaa aactagggag
     6421 tgtaagaagt gatggaaaat agtacgaccg aagcgcgtaa tgaagcgacg atgcatcttg
     6481 atgaaatgac tgtggaagag gctttaatta cgatgaataa agaagatcag caagtcccgt
     6541 tagcagttca aaaggcaata ccacaattga caaaagtaat taaaaaaaca attgcacagt
     6601 ataaaaaggg tggacgattg atctatatcg gtgcaggtac aagtggaaga ttgggtgtct
     6661 tagatgcagc ggagtgtgta cctacattca atactgaccc tcatgaaatt ataggtatta
     6721 ttgctggtgg acaacatgct atgacgatgg ctgtagaagg tgcggaagat cacaaaaaat
     6781 tagcggaaga agatttgaaa aatatagatt taacatcaaa agatgtcgtt ataggaattg
     6841 ccgcgagtgg caaaacgcca tatgttatag gcggtttaac atttgctaac acaatcggtg
     6901 ctacaacagt atctatttca tgcaatgaac atgcagttat aagtgaaatt gcgcagtatc
     6961 cagtagaagt taaagttggt ccagaagtat taactggttc aacgcgttta aagtctggta
     7021 cagcacaaaa attaatttta aatatgattt caaccatcac aatggttggt gtcggaaaag
     7081 tttacgataa cctcatgatt gatgttaaag caaccaatca aaaactgatc gaccgttcag
     7141 tgcgtattat tcaagaaata tgtgctatca catatgatga agcaatggcg ttatatcagg
     7201 tatctgagca tgatgtgaaa gttgcgacag ttatgggtat gtgtggcatt tctaaggaag
     7261 aagcaacaag acggttatta aacaatggtg acattgttaa acgagcaatc agagatagac
     7321 aaccttagga gggatttaaa tgaccaaaga acaacaactt gcagaaagaa ttattgctgc
     7381 agtaggtggt atggataata tagatagtgt catgaactgt atgacacgtg tgcgtattaa
     7441 agtattagat gaaaataaag tagatgacca agaactaagg cagattgatg gtgtcatggg
     7501 tgttatacac gatgaacgca ttcaagttgt ggttggacct ggtacagtca ataaagtggc
     7561 taatcatatg gcggaattaa gtggtgttaa actaggtgac ccaataccac acaatcacaa
     7621 tgatagtgaa aaaatggact ataaatcata tgcagctgat aaagcaaagg cgaataaaga
     7681 agcacataaa gcaaaacaaa agaatggtaa gttgaataaa gtattgaaat caattgccaa
     7741 tatctttata ccgttgattc ctgcatttat tggagctgga ttaattggtg gtattgcagc
     7801 agtactgagt aacttaatgg tggcaggcta tatttcaggt gcttggatta cgcaacttat
     7861 aacagtattt aatgtcatta aagacggtat gttagcatac ttagctattt tcactggtat
     7921 taatgcggct aaagaatttg gtgcgacacc aggacttggt ggcgtgattg gtggtacaac
     7981 gttattaacg ggtattgctg gtaaaaatat tttaatgaat gtcttcactg gagaaccatt
     8041 gcaacctgga caaggtggaa ttattggcgt tatttttgcc gtttggattt taagtattgt
     8101 cgaaaagaga ttgcataaaa ttgtgccaaa tgcgattgat attattgtaa cgccgactat
     8161 tgcattgttg attgtaggac tattaactat ctttatcttt atgccattag caggttttgt
     8221 ttcagacagt ttagtttcag tagttaacgg aattattagt attggtggcg tatttagtgg
     8281 atttatcatt ggtgcaagct tcctaccgtt agttatgtta ggacttcatc atatttttac
     8341 gccaattcat atagaaatga ttaaccaatc tggtgctact tacttattgc caatagcagc
     8401 gatggctggt gctggacaag taggtgccgc attagcactt tgggtaagat gtaaacgcaa
     8461 cacaacatta cgtaatactt taaaaggtgc attgccagtt ggtttcctag gtattggaga
     8521 accattaatc tatggtgtga ctttgccatt aggtcgacct ttcttaactg cttgtattgg
     8581 cggtggtatt ggtggcgctg taataggtgg aattggacat attggtgcca aagcaatagg
     8641 cccaagtggt gtgtcactat taccattaat cgcagataat atgtatttag gttatattgt
     8701 agggttactt gctgcgtatg ctggtggatt cgtttgtaca tatttatttg gaacgacaaa
     8761 ggcgatgcga cagacagatt tgttgggtga ttaatgatga caaatatttt atatcgcatt
     8821 gataagcagt tgagtgattt tacgaagaca gaaaagataa tcgctgatta cattttaaag
     8881 aatccacata aaatcattga tatgactgtg aatgatttgg cagatgttac gaatgttagt
     8941 acagcatcaa ttgttagatt tagtcggaaa atgacacatc aaggttttca agagctaaag
     9001 attgcgatat ctcgatactt acccgaagat attgcaacca atccacattt agaattgatt
     9061 gaaaatgaat ctgtagaaac tttgaaaaat aaaatgattg ctagagcaac gaatacgatg
     9121 cgatttgtag ctactaatat tatggatgcg caaattgatg caatttgtga tgtgttgaaa
     9181 aatgccagga caatattttt atttgggttt ggcgcatcga gtttgactat tggtgatctt
     9241 tttcaaaagt tatctcgtat tggcttaaat gtcaggttat tacatgaaac gcatttactt
     9301 gtgtcaacgt ttgcgacgca tgatgataga gattgcatga tttttgtgac gaatcaaggt
     9361 agtcatagtg aattgcagtc aattgcacag gtggccacac attacagtat tcccatcata
     9421 actatatcta gtacagctaa taatccagtg gctcaaattg cagactatgc attgatttat
     9481 ggcagaactg atgaaaatga aatgcgtatg gcggctacaa cgtcactatt tgcacagtta
     9541 ttcacggtag atatattgta ctatcgattt gtagcattaa attatcatgc gattctagat
     9601 tgtataaccc aatcgaaaat ggcacttgat aattacagga agcatcttgc gacgatagat
     9661 tttaaacatt agatattgtg tgcgttctaa tataaagtta gttgcagcgt aaacaattga
     9721 agtttttgat gtgattcagt tgcttgatga aaaattgttg atacaagttt gtaaaactgg
     9781 catagaggct attttgaaaa tgataaaggc gtgacaaatt aaagcaaagt tcagatttga
     9841 gctttgcttt tttcatagta tagaaattaa atgctgttat taagggggaa ttaatttgga
     9901 acttaacgag atgattaatt ttgtaaaaga aaacaataag ataattgtta ctttatcgct
     9961 aacaattttc acgtctgtaa tatttcctga gttaaaaagt tggtattcaa aaatcattaa
    10021 tactgaaaac aaatatagaa tattcgatag ggcaattatt atgattggca cagtgttacc
    10081 aatgtatttt cttttaggat ttttgaatta taaaatatat attaaactgc tagaaagacc
    10141 tcatagtgaa tttattaata caatatgttt ttcattaata ggcataagtt atggattaat
    10201 cttatttata gctatttcaa cttaccgaaa ttatttagcg attgttaata gatttcaatt
    10261 atataaaatg tgtggaaatt gtgattacat acatccctat aggtttgttg taaataaaga
    10321 aagtacatta attaaagatt gttttaaagt tggcaataat gacctttacg aacctggatc
    10381 aaactacaaa ataattaacc taaatcaaac catatatgga cactatgaaa aagttgaaag
    10441 tttttatcaa aataaaaacg acaaaatatt ccatatcatt acgctaaata gaaaaaactt
    10501 aataagaagt tggcttttta taaataattg gtctattatt ttatgtcgtt ttacaatgcc
    10561 gatagtgttc actttattta ttttttcttt atcctatttt gataatggca tttataatgc
    10621 ttttattcca attgtgatat acattttcac ttttgttttt caatcaatta tattcaataa
    10681 aatatataca gagaacaaac aattgaggac acaatatatt caaaagttga actctggcat
    10741 agaagtataa aaatataaag aatagtgtgt gttggtgttt ttaggatgcc acttacctca
    10801 aacacaaata ttaaaatata agacaataaa attagaataa atttacgttt gaagataaaa
    10861 aacaaacatt tttcattaaa gtttatgata tatttagagc aatagaaagt gtacggaagg
    10921 ggatatgaat ggcataccaa agtgaatacg cattagaaaa tgaaatgatg aatcaacttg
    10981 aacaattggg ttacgaaaga gtaacgatac gtgataataa gcaattgctt gataatttta
    11041 gaacgatttt aaatgagcgt catgcggaca aattagaagg caatccctta acagataaag
    11101 aatttcaacg tctgttaacg atgattgatg ggaaaagtat tttcgagagt gcccgtattt
    11161 tacgtgataa attaccactt agacgtgatg atgagtctga ggtttatttg tcgtttttag
    11221 atacgaaaag ttggtgtaaa aataagtttc aagtgacgaa tcaagtatct gtcgaggata
    11281 catataaagc acgttatgat gtaacgatat taatcaatgg actacccctt gtccaagttg
    11341 aattgaaacg tcgaggcatt gatattaatg aggcgtttaa ccaagtaaaa cgttaccgta
    11401 aacaaaatta cacaggctta ttccgctaca tacaaatgtt tatcattagt aatggtgttg
    11461 aaacgcgata cttttctaat aatgatagcg aactattgaa gagtcacatg ttttattgga
    11521 gtgataaaca gaataaccga atcaatacat tgcaatcgtt tgctgagtca tttatgagac
    11581 cttgtcaatt agctaagatg atatcgcgct atatgattat taatgaaaca gatagaatac
    11641 tgatggcaat gcgtccgtat caagtgtatg cggtagaatc acttattcaa caagcgactg
    11701 agacagggaa taatggatat gtatggcata caactggaag tggtaagacg ttgacttctt
    11761 ttaaagcgag tcagatttta tcacagcaag atgacattaa gaaagttatc tttttggttg
    11821 accgtaaaga cttggatagt caaacagaag aggaatttaa taaatttgct aagggtgctg
    11881 tagacaaaac ttttaatacc tcgcaactgg tacgccaact aaatgataaa agtttgccac
    11941 ttattgtaac gacgattcaa aaaatggcta aagcgattca aggtaatgcc catttattag
    12001 aacagtataa aacgaataaa gttgtattta ttattgatga gtgtcatcgc agtcaatttg
    12061 gtgacatgca tcgcctagtt aaacaacatt tcaaaaatgc ccaatatttt gggttcactg
    12121 gtacgccacg tttcccagaa aatagtagtc aagatggtag aacaactgca gatattttcg
    12181 gtagatgttt acatacgtat ttaattagag atgccattca tgatggtaat gtacttggtt
    12241 tctcagttga ctatattaat acttttaaaa ataaagcttt aaaagcagaa gataacagca
    12301 tggttgaagc aattgatacg gaagaagtct ggttagcgga taaacgtgtg gaattagtaa
    12361 cacgacatat catcaataat catgataaat atacacgtaa tcgtcaatat tcaagtatat
    12421 ttacagttca aagtattcac gcgcttatta aatattatga gacatttaag cgacttaaca
    12481 aaaagttgga acaaccatta acggtagctg gtatatttac gtttaaacct aatgaagatg
    12541 atcgtgatgg tgaagtgcca tatcattcac gtgaaaaatt agagataatg attagcgatt
    12601 ataataaaaa gttcgagacg aatttttcaa cagacacaac taatgagtat tttaatcata
    12661 tttcaaaaaa tgttaaaaag ggcgttaaag atagtaaaat tgatatctta atcgttgtta
    12721 atatgttctt aactggtttt gatagtaaag tactgaacac tttatatgtt gataagaatt
    12781 taatgtatca tgatttaatt caagcgtatt cacgtacaaa tagggttgaa aaagaatcaa
    12841 agccatttgg taaaattgta aactatcgtg acttgaaaaa agagacagac gatgcactga
    12901 gagtattctc acaaacaaat gatacggata caattttaat gcgtagttat gaagagtata
    12961 aaaaagaatt tatggacgct tatcgtgagc ttaaaatgat tgtgccgaca ccacacatgg
    13021 ttgatgacat tcaagatgaa gaagagctaa agcgctttgt tgaagcttat cgtttattag
    13081 ctaaaataat attacgttta aaagcatttg acgagtttga gtttacaatt gatgaaattg
    13141 gaatggatga acaagagaat gaagactata aaagtaaata tttagctgtg tacgatcaag
    13201 taaaaagagc gacggctgag aaaaataaag tatccatttt aaatgatatt gatttcgaaa
    13261 tagaaatgat gcgtaatgat acgattaatg tgaattatat tatgaatata ttgagacaaa
    13321 ttgatcttga agacaaagcg gaacaacgtc gtaaccaaga acaaattaga cgcattttag
    13381 atcatgcaga tgatccgaca ttgaggttaa aacgagatct aattagagaa ttcatcgata
    13441 atgttgtacc ttctttaaat aaggatgatg atatcgatca agaatatgtt aatttcgaaa
    13501 gtattaagaa agaagcggag ttcaaaggat ttgctggaga gagatctatc gatgaacaag
    13561 ccctaaaaac aatttcaaat gactaccagt atagtggtgt tgtaaaccca catcacctta
    13621 aaaaaatgat tggtgatttg ccattgaaag aaaaacgtaa agcaagaaaa gccattgaat
    13681 ctttcgtggc agaaacaact gaaaaatacg gtgtgtaatg attcagcccc ctcgctagat
    13741 tagtgtaggg ggcattatta ttttctatct tttgtaagtt accatgtgtt tggcaatcat
    13801 catttggttt caatacaatt ttatcatcgt atgtgtatag aaataatgtc tataggcatt
    13861 taaaatagtt tataatatta acaggataag tattaaatgt atgttgaagg aggtgcgtag
    13921 ctatggataa tagaaatatg attaatcgtg tttttagtca aaagatatta catcaaattg
    13981 caatcaaaaa taaaagtgat gttgttgatg aggcatatga tttttatata cagggaccta
    14041 aaaatatcaa tgtaatacag aagatgaaat ctttatataa ttatcttaaa aagtcttatc
    14101 gtaacgaata tttttacaaa aacacaatgc ttaataaact ccttctagga cgacattctg
    14161 ttaatacaac tactgcactt tctgagatgc ccatagggga aagtattgct gattttatat
    14221 tgttaaacgg caaaggtgtt gtctatgaga ttaaaacaga attagataag ttggatagat
    14281 tagataatca aattaatgat tattatgaag tgtttaatta tgtcgtagtc attacaaatg
    14341 acaaacacct gaataaagtt atggctagat acaaagatac aacagttgga attttagtgt
    14401 tgacttctag aaatacactg agtgaagttc aaaaacctaa agaaaacaat agtctcttaa
    14461 acacaaaagc gatgtacaac tttttacgaa aagaagaaag aaaaagagtt attgcacaaa
    14521 atcatatgga tgtgccaact tataatgatt tcacagagta tgatgtgtta tttgacgtgt
    14581 ttaaagaaat accaatgacg aaactgcata acaatatgat ttctgagttg aaaaaaagag
    14641 gcaacatgaa agaatacaaa gatgaatttt tagcagctcc gactgaaatt aagttcttgt
    14701 tatatttcgc aaaaatgaca aagaaagata aaaataaact atatcatttt cttaaggatg
    14761 caaataatcc cccgcacttc acatagtggc gggggattta tactggcgtc aaaatgccca
    14821 gagtatgggt gtgaccctta aatcatggca aagcatctaa cacttgatat ggtgccgagc
    14881 cctaacatag cacaatatag ttagtatgac aaagtcatct aacataacac atcagaagtt
    14941 gcccgattta ttccagacca tacagagata aagttgcaca acgcatgact tttatttagc
    15001 aataactggt acttctgaaa taagttgctt tgcatagtct gattgcggat gtttgataat
    15061 atcttctgtg ttattcagtt caacgatttc gccatttttc ataactgcaa ttcgatcaca
    15121 tatttcattg ataacaccca tgtcatgtgt gatgaataaa taagtgatgc cgaagtctaa
    15181 ctgtaattgt tttaataact cgatgatatc tttttgaatt gaaacgtcta aagctgacac
    15241 tgcctcgtcg caaacaatca ctttaggttc tacagcaagt gctctcgcga tacttacacg
    15301 ctggcgttgc ccaccagata attcgtgtgg atagcgatat aagaaacttt gatctaggcc
    15361 aactttttct aacaacgata cgacagtttt aataatgtca tcattatctt tgactttccc
    15421 atgaatgata agtggtcgtt taatcacatc aatgacttta aatcttggat taatagatgc
    15481 gaatggatct tggaaaatca tttgtatctc ttgtcgtaaa gatttcaatt catcatcttt
    15541 aaacaaactt aatggtaatt cgttatacca aataaaacct tctgacactt cctttagacc
    15601 gacgaccgtc ttagctaatg tcgatttccc tgaccctgat tcaccgacaa tgcctaatgt
    15661 ttcgcctttt ctaatagcca agttaatatc actaactgct cggtataggc tgccactcgg
    15721 tgaagtgtaa tccacgctca cgtgatcgaa ttttaataaa atatcattgt ttaacggtct
    15781 tggcgggcgc gtttgatgaa tatcaggaat cgcatctatt aagcgtttcg tataggtatg
    15841 ttgtggcgat ttaaaaatac tttcaaccgt gccactttca acgacacttc catctttcat
    15901 tacaatcaca tcgttgcaaa attgatacac agcacctaaa tcgtgagtga taaaaataat
    15961 agacgtttct gtgtactcat aaagggactt cattaactgc agtaattgat tttgtgtact
    16021 cgcatctaat gccgttgttg gttcatctgc aattaaaatt tgtggcttta aaatcaatgc
    16081 cattgctatc atgacacgtt gacgcatacc accagaaagt tcatgtggat aagcatcaaa
    16141 ttgttgagtt gcatgtttta tacctacttt ttctaaaatg tctattgtca tagactttgc
    16201 ttcagattta gatacacgtt tatgttgaaa tagtacttct gtaatttgtt tgccaatcgt
    16261 taatcttgga ttcaacgaag agagtggatc ttgaaaaatc attgaaatat ccttacctcg
    16321 aatttgttgt aacgctgaag ttgataaatt agttaacgat tgcccattaa aaataatttc
    16381 tcctgttaac gtgtgatccg gataatctgg tagtagccct aaaatagatt tagcggtaat
    16441 actttttcct gatcctgatt caccaacaat acctaggata tgtttttttc gtaattcgaa
    16501 agagacgttt tttaccgctt gaactgtagt ttcatcataa ttgaattgta cattcagact
    16561 gttgacttct aataaatttg acatgatgtt gtgcctccct attcacaaat gtgtaaattt
    16621 attctatact tttgtatatc atagtaatct actcaagatt attttacaag gagtgattat
    16681 cataattact tatttagaat cttttaagtc gttgtatcac aaggcatttt acaagtttgt
    16741 attatcggta ttaagcttgc caatattttt atatgcagtg ataaagtttt tcttttctgc
    16801 taagagaaaa aatttttacg ctaataattc tgaaatttca gaaattgaac aggcgttaca
    16861 tcaaaaatat aaatatt
//
LOCUS       DALMNS010000065        16721 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.065, whole genome shotgun sequence.
ACCESSION   DALMNS010000065 DALMNS010000000
VERSION     DALMNS010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16721)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16721)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16721
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.065"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(157..726)
                     /locus_tag="O6Y56_001720"
     CDS             complement(157..726)
                     /locus_tag="O6Y56_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDB5574974.1"
                     /translation="MSELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLK
                     KPHIKQYIQEQKDKIIDENVLTAKELLHVLTNAAVGDETETKEVVVKRGEYKENPKSG
                     KVQLVYNEHVELIEVPIKPSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGD
                     DEELDKAVKDVSNANPNHTVIVDDIPLED"
     gene            complement(723..935)
                     /locus_tag="O6Y56_001721"
     CDS             complement(723..935)
                     /locus_tag="O6Y56_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island family protein"
                     /protein_id="HDB5574975.1"
                     /translation="MADDNIDDHIVKNHLEMIVDRVANDKEFYIFDSLIQGRSFKDIS
                     NVLECSEQSVRLWYETLLDKIVEVIE"
     gene            complement(1067..1594)
                     /locus_tag="O6Y56_001722"
     CDS             complement(1067..1594)
                     /locus_tag="O6Y56_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore coat protein"
                     /protein_id="HDB5574976.1"
                     /translation="MKLLKTKNCLYYRNGDNKLSEYQLLTQFNPAFINKKIKMCEFQI
                     ESMYHMSASTTTCDEIMGVVSVSYPIEKLVIKIIETKAGLQNYKNRSINNMALLKKVL
                     NHYTEKEQKQVVKYMRSNGRYKPYNVIERLQVDLYQASIKQRSERQKQRNTAIENSKI
                     ARVNAYHQSSYVKVV"
     gene            complement(1645..1863)
                     /locus_tag="O6Y56_001723"
     CDS             complement(1645..1863)
                     /locus_tag="O6Y56_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001662729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsid morphogenesis B protein"
                     /protein_id="HDB5574977.1"
                     /translation="METKYELNNTKKVANAFGLNEEDTNLLINAVDLDIKNNMQEISS
                     ELQQSEQSKQKQLGTTLQNLAKQNRIIK"
     gene            complement(1881..2459)
                     /locus_tag="O6Y56_001724"
     CDS             complement(1881..2459)
                     /locus_tag="O6Y56_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000846286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDB5574978.1"
                     /translation="MKTESYFKEYNQFVIDQQKAIQELKQERNALESKIKIDKSTYKQ
                     LIMDGQDDKADNLYQATDADEKKLKALNKRLETKKSVSKEVKYQKTIELLKHQSELSS
                     LYESEKQSALGKLKKVVDAYNEIIDEIEDINDRYEDEHQQYASIYSQEQLYDDKEARE
                     ALNGYFRENIFTSYINGNDLPYEHNNKLFLKR"
     gene            complement(2471..2812)
                     /locus_tag="O6Y56_001725"
     CDS             complement(2471..2812)
                     /locus_tag="O6Y56_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001668138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDB5574979.1"
                     /translation="MQSIAEKETYHLPTEHLQVFNVIKNTSNKYITKTKILNQLGYEY
                     NSSNERWLRRVINSLVYDYGYPIGCSYKPSERGYYIITTEQEKQQAMRSIKKLADGSM
                     KRYEALKRIKV"
     gene            complement(3329..3970)
                     /locus_tag="O6Y56_001726"
     CDS             complement(3329..3970)
                     /locus_tag="O6Y56_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012990921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDB5574980.1"
                     /translation="MNIETIVNEFETRAGTLLRYYTGLLERSKVQPCCFKLYNDPFDM
                     VYVMMNSKLFSHVYIKDCKVRQSFELASPKHTEGLIRSIEGHYVGYELHDGKQLSISD
                     MMASQLFEDEYFMYGLQTYAESNNSDVFKCLENGFDTDTLEGIQSSNTDVIANIEMLY
                     QLATGINEPVPELVEGLKLVTEFVQDENATQEDYKALERKLNDLKASYYSLSK"
     gene            complement(3967..4251)
                     /locus_tag="O6Y56_001727"
     CDS             complement(3967..4251)
                     /locus_tag="O6Y56_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDB5574981.1"
                     /translation="MNDKEKIYNQLHHDAPIQIMPAPENLFVEYIEDGEVWYSPVVCI
                     ALSKAHNINFYDSDDVGCIDKAATCSIKKFNPETGEFEQFSKMAQKEITQ"
     gene            complement(4253..4615)
                     /locus_tag="O6Y56_001728"
     CDS             complement(4253..4615)
                     /locus_tag="O6Y56_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012990923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDB5574982.1"
                     /translation="MNKNQLKSEILEYIKAHAGTSFVEIERVFEENNFDYKGDGAYTS
                     GQHPNVVFWIGWNQEAFDVIAELKKDRRIEMDICEPIVYMVDGKGLDLPIVRSKNIKT
                     DHWLPVTFTISKKETECV"
     gene            complement(4901..6370)
                     /locus_tag="O6Y56_001729"
     CDS             complement(4901..6370)
                     /locus_tag="O6Y56_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000390454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence-associated protein E"
                     /protein_id="HDB5574983.1"
                     /translation="MEDVTNEEVFEMIDSRTGVLNANDWKSQLRRSATTQALKKTTTN
                     AEIILCNDESLKGLVQYDAFEKVTKLKRLPYWRSKGDTNYYWADIDTTHVISHIDKLY
                     NVQFSRDLIDTVIEKEAYQNRFHPIKSMIESKSWDGIKRIETLFIDYLGAEDNHYNRE
                     VTKKWMMGAVARIYQPGIKYDSMIILYGGQGVGKSTAMSKLGGHWYNQSIKTFKGDEV
                     YKKLQGSWICEIEELSAFQKSTIEDIKGFISAIVDIYRASYGKRTERHPRQCVFVGTT
                     NNYEFLKDQTGNRRFFPITTDKNKATKSPFDDLTPDVVQQMFAEAKVYFDEDPTDKAL
                     LLDKEASEMALKVQEAHSEKDALVGEIEEFLERPIPSDYWYRTLEEKRVSAHDVIDQD
                     YIKLYGDGKLIELPNTKPGAYVWRDKVCSMEIWKVMMKRDDQPQQHHLRKIDKALRNT
                     SYCGQSKSRHRFGEGIGRQYGFGINLISYYQGLKSKEQK"
     gene            complement(6387..7256)
                     /locus_tag="O6Y56_001730"
     CDS             complement(6387..7256)
                     /locus_tag="O6Y56_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primase alpha helix C-terminal domain-containing
                     protein"
                     /protein_id="HDB5574984.1"
                     /translation="MNEIKLKYDTQVSVVHYESLDSRSFKSFSMPKWSKLVNKLSVPI
                     EANYKYARGVAVYGDIKDNTNDHGEIIKKHRNDKNVIYRNVIVLDYDEINDVKQLHDA
                     ISSVLSSVAWYWHTSFSHTTEQARIRLYIPLNERISADDYRKYTKVLANKIGHKVDEG
                     SYQPSRCFALPVIQKGHIFIKRVNDCPIMDVDMLEQWSKEYKQSNGSPNIKGYTRRDS
                     AYWRDIAFGVSEGERNSTLASITGYLLRRYVDPNLVYGLVSAWASVCKPPINQSEVNN
                     TFKSILKKDSKNS"
     gene            complement(7320..7640)
                     /locus_tag="O6Y56_001731"
     CDS             complement(7320..7640)
                     /locus_tag="O6Y56_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001103931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1474 family protein"
                     /protein_id="HDB5574985.1"
                     /translation="MNWEIKDLMCDIEVIKQKINDVATKHAWFVEDRFVKNELETKRE
                     HINFSASYLEHRIQNEHTVELLHVYLKEFSELIQKFHEIEKASSENFDEESDDAKNSI
                     KVAE"
     gene            complement(7643..7852)
                     /locus_tag="O6Y56_001732"
     CDS             complement(7643..7852)
                     /locus_tag="O6Y56_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001058486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDB5574986.1"
                     /translation="MNNEQKEVIEHLVYQLELSVMNNLESYEHTEYVNGIEVVSEISR
                     EKHLELIMKWCAQELKNNFQLEKGE"
     gene            complement(7845..7991)
                     /locus_tag="O6Y56_001733"
     CDS             complement(7845..7991)
                     /locus_tag="O6Y56_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000784887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDB5574987.1"
                     /translation="MKMYLAYICLVSLLTILLLAISNMYVAFSVYAWLITLGCNLTGG
                     LENE"
     gene            complement(8003..8275)
                     /locus_tag="O6Y56_001734"
     CDS             complement(8003..8275)
                     /locus_tag="O6Y56_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002459646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HDB5574988.1"
                     /translation="MSRTKLHDVPAKENTITEPKQVVVNPLFAKPNALASIFGISYSS
                     VNRILKEWEKDSKGVDDLYYSLSSTMIVISIPRFEEYMKARHKKWM"
     gene            complement(8268..8531)
                     /locus_tag="O6Y56_001735"
     CDS             complement(8268..8531)
                     /locus_tag="O6Y56_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000243849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDB5574989.1"
                     /translation="MVLNLKRLRAERIACGITQDEMAHKMGWKTRTPYAKRENGIVDI
                     GANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILKGGELNV"
     gene            8724..9056
                     /locus_tag="O6Y56_001736"
     CDS             8724..9056
                     /locus_tag="O6Y56_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016170686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDB5574990.1"
                     /translation="MRTNDEIITIIKTSMKEQNMSLSELARRVGVAKSAVSRYLNLTR
                     EFPLNRAEDFAKVLGIKTEYLLGFAEREESTKQDTIAAHLDGDFTEEELIEIRKYAEL
                     VRKAHRNQ"
     gene            9068..9526
                     /locus_tag="O6Y56_001737"
     CDS             9068..9526
                     /locus_tag="O6Y56_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HDB5574991.1"
                     /translation="MYLYEKMVIENKEIPIDDGKSLGNFEGLYDNGVILINKNLSERR
                     KAEVLYEELAHHKLTYGNILDQSKFNNRKFENYARRHGFISAVPLREIVEAYNYGVRN
                     LYELSEYLQLSEEYILEAIEQYKKIYGIGTHYGEYSITFEPLRVFKYKEI"
     gene            9543..9974
                     /locus_tag="O6Y56_001738"
     CDS             9543..9974
                     /locus_tag="O6Y56_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001228759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5574992.1"
                     /translation="MRKLLGLALASTLILGACGSNDGDKKEESKSYTTNDIVKGFKDN
                     KLNVINEKEMTREDFGLAPMKTDEAKMFVVQDDKNARVMKFKNSDDLKQTKKYYDELG
                     KESAAFYSHTHSKGKFLIQMNGDIDDATFNKYKNSMDKTLK"
     gene            10044..10772
                     /gene="seq"
                     /locus_tag="O6Y56_001739"
     CDS             10044..10772
                     /gene="seq"
                     /locus_tag="O6Y56_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal enterotoxin type Q"
                     /protein_id="HDB5574993.1"
                     /translation="MNKIFRILTVSLFFFTFLIKNNLAYADVGVINLRNFYANYEPEK
                     LQGVSSGNFSTSHQLEYIDGKYTLYSQFHNEYEAKRLKDHKVDIFGISYSGLCNTKYM
                     YGGITLANQNLDKPRNIPINLWVNGKQNTISTDKVSTQKKEVTAQEIDIKLRKYLQNE
                     YNIYGFNKTKKGQEYGYQSKFNSGFNKGKITFHLNNEPSFTYDLFYTGTGQAESFLKI
                     YDDNKTIDTENFHLDVEISYEKTE"
     gene            10796..11524
                     /gene="sek"
                     /locus_tag="O6Y56_001740"
     CDS             10796..11524
                     /gene="sek"
                     /locus_tag="O6Y56_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000733775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal enterotoxin type K"
                     /protein_id="HDB5574994.1"
                     /translation="MKKLISILLINIIILGVSNSASAQGDIGIDNLRNFYTKKDFVDL
                     KDVKDNDTPIANQLQFSNESYDLISESKDFNKFSNFKGKKLDVFGISYNGQCNTKYIY
                     GGVTATNEYLDKSRNIPINIWINGNHKTISTNKVSTNKKFVAAQEIDVKLRKYLQEEY
                     NIYGHNGTKKGEEYGHKSKFYSGFNIGKVTFHLNNNDTFSYDLFYTGDDGLPKSFLKI
                     YEDNKTVESEKFHLDVDISYKETI"
     gene            11613..12833
                     /locus_tag="O6Y56_001741"
     CDS             11613..12833
                     /locus_tag="O6Y56_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000264629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDB5574995.1"
                     /translation="MWLEKFKNKNKETKYRYYEKYKDPLTAKWRRVSVVLNKNGKQSQ
                     KEAQRLLNERIEAKLNDKTPTTLKSLTFHVACDEWFQSYIKTSGSKRTTIKTKLSKLN
                     TLKKFVDEDILINKITLSYAQQVFDEMDNKGYVYQVNKDALSIFKNVFEYTRRIYKLQ
                     DLEFLKDITLNKRIKSYDEVKAKRNKYLELNEIQSIIKDINTKAQKMHSGIHKRFYLF
                     VALMTEFQALNGMRIGEMLAIQNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTE
                     SSYRTIGLSSRSCEILKKAILENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILR
                     EAAKDVGIDKEVSSHILRHSHISLLSQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQM
                     DKDMMNKLEQVKLG"
     gene            complement(12976..13797)
                     /locus_tag="O6Y56_001742"
     CDS             complement(12976..13797)
                     /locus_tag="O6Y56_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDB5574996.1"
                     /translation="MKKLFGLILVLTFAVVLAACGNGSKSGSDDKKITVGASPAPHAE
                     ILEKAKPLLEKKGYELDIKTINDYTTPNKLLDKGEIDANYFQHTPYLNTEKKDKGYKI
                     VSAGDVHLEPMAVYSKKYKSLKELPKGATVYVSNNPAEQGRFLKFFVDAGLIKIKKGV
                     KIEDAKFSDITENKKDIKFNNKQSAEFLPKIYQNEDADAVIINSNFAIEQKLNPKKDS
                     IAVESAKDNPYANLIAVKEGHQDDKKIKALIEVLQSKDIQDFINEKYNGAVIPAK"
     gene            complement(13815..14510)
                     /locus_tag="O6Y56_001743"
     CDS             complement(13815..14510)
                     /locus_tag="O6Y56_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5574997.1"
                     /translation="MGKSFSEIINEMITMPNIQWPEVWTAIVETLYMTVVSTIFAFIL
                     GLILGVLLFLSAKGKSIGARLFYSIVSFIVNLFRAIPFIILILLLIPFTSLILGTISG
                     PTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTWTVIRKVLLPEAMPAL
                     VSGITVTAIALVGSTAVAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQ
                     FIGDWLTNKLDKR"
     gene            complement(14503..15528)
                     /locus_tag="O6Y56_001744"
     CDS             complement(14503..15528)
                     /locus_tag="O6Y56_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HDB5574998.1"
                     /translation="MIELKEVVKEYRTKNKEVLAVDHVNLSIRAGSIYGVIGFSGAGK
                     STLIRMFNHLEAPTSGEVIIDGDHIGQLSKNGLRAKRQKVSMIFQHFNLLWSRTVLKN
                     IMFPLEIAGVPRRRAKQKALELVELVGLKGREKAYPSELSGGQKQRVGIARALANDPT
                     VLLCDEATSALDPQTTDEILDLLLKIREQQNLTIVLITHEMHVIRRICDEVAVMESGK
                     VIEHGPVTQVFENPQHTVTKRFVKEDLNDDFETSLTELEPLEKDAYIVRLVFAGSTTT
                     EPIVSSLSTAYDIKINILEANIKNTKNGTVGFLVLHIPYISSVDFGKFEKELIERQVK
                     MEVLRHG"
     regulatory      complement(15617..15720)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            complement(15778..16074)
                     /locus_tag="O6Y56_001745"
     CDS             complement(15778..16074)
                     /locus_tag="O6Y56_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDB5574999.1"
                     /translation="MNNSLDIKDVTTFYEEDKHLIFGYTPTCGTCKVSERMLDIANEI
                     LQLPLLKIDLNFYPQFCKDMQIMSTPILLLMNKDKEVKRIYAFKSVTDLLENLK"
     gene            complement(16067..16453)
                     /locus_tag="O6Y56_001746"
     CDS             complement(16067..16453)
                     /locus_tag="O6Y56_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HDB5575000.1"
                     /translation="MAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDM
                     IESLYDKQVFVLADSDDEGDRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHVLS
                     KHGFTCKKETPFLPNINNERLVLVNE"
BASE COUNT         5418 a         3044 c         2311 g         5948 t
ORIGIN      
        1 atcagggaaa taactataca tcacctaaac ttatatacga aaacatcttt aacaacatag
       61 tgttttctca taattatttt tctacctagt tctaatttta tgactgtata atgttatgaa
      121 cactatatag cacaattaag cgttgcttca atctcctcaa tcctctaacg gaatatcatc
      181 cacaatcaca gtatgattag gattagcgtt agatacatct ttcactgcct tatctaattc
      241 ctcatcatcg ccatcccatt caccaatgtt aatgaatata ggcacattcc cgttaatatc
      301 atgcttatct gtaaataact tatggtattt acccaacata tcacgagctt ttaaacgatc
      361 actaggtttt attggtacct ctatcagttc aacatgttca ttatagacta attgtacttt
      421 gccacttttt ggattctctt tatattctcc acgcttgact acaacttctt tcgtttctgt
      481 ttcatcaccg actgccgcat tcgtaagcac atgtagtaac tcttttgcgg ttaatacatt
      541 ctcatctata atcttatctt tttgttcttg tatatattgc ttgatgtgtg gcttcttcaa
      601 taacctacac cctgtcacat gtgcgctatt tgcgctatag cctgctttta tggcactttg
      661 tgttacatta agtgttctta tatactcatt cacaaaacgc gcttgttttg ccgttaactc
      721 actcattcta tcacctccac aattttatct aataaggttt cataccataa tcttacagat
      781 tgttctgaac actctaagac attactaata tctttaaaac tacgtccttg tattaaagaa
      841 tcgaaaatat aaaactcttt atcattagct actcggtcaa caatcatttc taagtgattc
      901 tttacaatat gatcatcaat gttatcgtct gccatccatt cattggaatt ttcatcacct
      961 attgaaaaga attcatcggt atttatttca tcatctatca acacatcact tctagttcgc
     1021 ttatgataat cacaaacgaa gtcttttatt tgctttttat ccattgttac accactttta
     1081 catatgaaga ttggtgatat gcatttactc gtgcaatctt actgttttca attgctgtat
     1141 ttctttgttt ttgacgttct gaacgttgtt taatacttgc ttgatacaaa tcaacttgta
     1201 agcgttcaat gacgttgtag ggcttatatc gtccatttga acgcatatat tttacaactt
     1261 gcttctgctc tttttctgta taatgattta gtaccttttt caacaacgcc atattattta
     1321 tagatctatt tttatagttt tgtaaccctg cttttgtttc aataattttg ataactaatt
     1381 tttcaatcgg atatgagaca gacacgaccc ccattatttc atcacatgtt gtggtcgacg
     1441 cactcatatg gtacatactt tcaatttgga attcacacat cttaattttt ttattaataa
     1501 atgctgggtt aaattgcgtt aatagttgat actcagatag tttattgtcg ccattacgat
     1561 aatataaaca attcttcgtt ttaagcagtt tcatttattc acccctataa acagagccta
     1621 cccgaattgg ataggcaatc attgctattt aataatcctg ttttgcttag ctaaattttg
     1681 tagcgttgta cctaattgct tttgcttaga ctgttctgat tgttgtaact cacttgaaat
     1741 ctcctgcata ttgtttttaa tatccaaatc aactgcattt attaatagat ttgtatcttc
     1801 ttcatttaaa ccaaatgcat ttgcgacctt tttagtatta tttaactcgt attttgtttc
     1861 catttaatta ccctttcttt ttaacgtttt aaaaacaact tgttattgtg ttcgtatggc
     1921 aaatcattac cattaatata tgatgtaaat atattttctc taaagtagcc attcaatgct
     1981 tccctagcct ctttatcatc atataattgt tcttgactat aaatactcgc atattgctga
     2041 tgctcatctt catatctatc attaatatct tctatttcat caatgatctc attatatgca
     2101 tcgactactt tttttaattt acctaaagct gattgctttt ctgattcgta taatgatgac
     2161 aactcgcttt gatgttttaa taattcaatt gtcttttgat atttaacttc tttcgacaca
     2221 cttttctttg tctctaagcg tttattaagt gcttttagtt tcttttcatc agcatctgtt
     2281 gcttgatata ggttatctgc tttatcatct tgtccatcca tgattaactg tttatatgtg
     2341 gacttatcta tctttatttt actctccaat gcattacgct cttgtttcaa ttcttgtata
     2401 gccttttgtt gatctattac aaattggttg tattctttaa agtacgattc agttttcatt
     2461 tttatcccct ttacacttta attcgtttca aagcttcata gcgtttcata ctgccatcag
     2521 ctaatttctt aatacttctc atcgcttgtt gcttttcttg ttctgtcgta atgatgtaat
     2581 aaccacgttc actaggttta taactgcacc cgataggata gccataatca tatactaatg
     2641 aattgattac tcttcgtaac catcgttcat tgcttgaatt atattcatat cccaattgat
     2701 ttaagatttt agttttagta atatatttat tggacgtatt ttttatcaca ttgaaaactt
     2761 gcaggtgttc ggtgggtaaa tgatacgtct ctttttctgc gatactttgc atttctacac
     2821 ctctttcttt taattatttc atacctaaat tataccattt tcactgacct aaaacaaact
     2881 tacgttcgct ttatagcacg ctttgtcagt tgtttagcct atctcatata acacttataa
     2941 aacaacatta taaaattaat aaggagcctt ttagatcatt caaatacaga acttaagttc
     3001 gataaaacag agcgaacaaa ttacgaacaa acttaacttt taggcctata ccaaaaacac
     3061 aaactttagc ttgtattagc gttaacaaag ttcgcacagc ttgcacaaat cttgccattt
     3121 tttcaattct caaagactgt ataccttccg attttaaaag ctagcacctt tatataacct
     3181 tattattttc aaagccataa aatagcttaa tatcaacgtt ttatactttt ttaaagttct
     3241 gtacctcaac cattttaaac tgctatacct cgtataaaat cgtagtattt tattagaagc
     3301 cacacactac atgtgacccc tcataacatt atttactcaa gctatagtaa gacgctttta
     3361 gatcattcaa tttacgttct aacgccttgt aatcctcttg tgtcgcattc tcatcttgta
     3421 caaactcagt tactaatttt aacccctcaa ctaactctgg tactggttca ttgattcccg
     3481 tagctaactg atacaacatt tcaatattcg ctatcacatc agtattactc gattgaatgc
     3541 cctcaagtgt atctgtatca aatccatttt ctaagcactt aaacacatca ctattatttg
     3601 attctgcata tgtttgtaat ccatacataa aatactcatc ttcaaacaat tgactggcca
     3661 tcatatcgct aatagaaagc tgtttaccgt catgtaattc ataacctaca taatgcccct
     3721 ctatgcttct tataagcccc tcagtgtgct taggtgacgc taattcaaat gattgcctta
     3781 ctttacaatc tttaatatat acatgactaa acaacttact attcatcatc acgtatacca
     3841 tatcaaatgg atcattgtat aacttaaagc aacacggttg cactttacta cgttctaata
     3901 atcctgtgta gtaccttagt aacgtgcctg ctcgtgtttc aaattcattt acgatagttt
     3961 ctatgttcat tgtgttatct ccttttgagc cattttgctg aattgttcaa actcacctgt
     4021 ctcaggatta aattttttaa tgctacatgt ggctgcttta tcgatgcacc ccacatcatc
     4081 actgtcataa aaattaatat tatgggcttt acttaaagct atacatacaa ctggtgaata
     4141 ccacacttcg ccatcttcta tatattcgac aaataaattt tcgggtgctg gcataatttg
     4201 aattggtgca tcatgatgaa gttgattata aattttctct ttatcattca tattagacac
     4261 actccgtttc tttcttacta atagtaaacg tgacaggtag ccaatgatct gttttaatgt
     4321 ttttcgacct tacaataggc aaatccaaac ctttaccatc aaccatataa acaattggct
     4381 cacaaatatc catctcaata cgtctgtctt ttttaagttc agcgataaca tcaaacgctt
     4441 cttgattcca cccaatccaa aacacaacat tgggatgttg accacttgta tatgcgccgt
     4501 cacctttata atcaaagtta ttttcttcaa atacacgttc tatttctaca aatgatgtac
     4561 cagcatgcgc ctttatatat tctaaaattt ctgactttaa ttgattttta ttcattttct
     4621 tcctcctaat ttttgatagg tgtcccattt cgctattttc aatatgtttc aggacattgt
     4681 caggacaatg ctcaaacacc actctcccaa tggattaaag ttatctgtcc cattgtccca
     4741 ctgttttatg cctacactta tatatttttt aatgtgtata tattatttta aaagtttagg
     4801 gtaaaagttg cgggacacag ggacaaacat aacataatgc ttactgccac aagagattga
     4861 aggtgtccta ccattgtccc ataatcgtct cgttgtcccg ttatttttgt tctttgcttt
     4921 ttaaaccttg ataataggat attaaattaa taccaaaacc atattgtcta ccaatacctt
     4981 caccaaatct atgacgcgac ttactttgcc cacaataact tgtatttctt aacgctttat
     5041 caatttttct taaatggtgt tgttgtggtt ggtcatctcg tttcatcatc actttccaaa
     5101 tttccatgct acataccttg tcacgccata cataagcacc tggttttgta ttcggtaatt
     5161 caatcaattt accatcacca tataatttaa tatagtcttg gtctataaca tcatgcgcag
     5221 acactctttt ttcttctaac gttctatacc aatagtctga cggaatagga cgttcaagga
     5281 attcttctat ttctccaact aaagcatctt tttcagaatg agcttcttgg acttttaaag
     5341 ccatctcact cgcttcttta tctaataaca atgctttatc cgtcggatcc tcatcaaaat
     5401 atactttagc ttcagcaaac atttgttgca caacatctgg tgttagatcg tcaaacgggc
     5461 ttttagttgc tttattttta tctgtcgtaa tagggaaaaa acgacgattg cctgtttggt
     5521 cttttaaaaa ctcatagtta ttggttgtcc ctacaaacac acactgtcta ggatgacgct
     5581 ctgttcgttt accatacgaa gctctataaa tatctacaat agcacttata aaccccttaa
     5641 tatcttcaat agtagacttt tgaaatgccg acagttcttc aatttcacat atccaagaac
     5701 cctgcaattt cttatagacc tcatcacctt taaacgtttt aatactttgg ttataccaat
     5761 gacctcccaa tttactcatt gccgtagatt ttccaacacc ttgaccacca tataaaataa
     5821 tcatggaatc atatttaata cctggctgat agattctagc aactgcgccc atcatccatt
     5881 tttttgtaac ttctctatta tagtggttat cttcagcacc taaataatca atgaagagcg
     5941 tttcaattct tttgattccg tcccatgatt tagattcaat catcgattta atagggtgaa
     6001 atctattttg ataagcttcc ttttcaatta cagtatcaat aagatcacgg ctaaactgca
     6061 cattatacaa tttatcaata tgtgaaatca catgtgtggt atctatatca gcccaataat
     6121 aattcgtatc tccttttgac ctccaatacg gtagacgttt cagtttggtt actttttcaa
     6181 aagcgtcata ttgtactagc ccttttaaac tctcatcatt acacaatatg atttcagcat
     6241 ttgtagtcgt ttttttcaat gcttgtgtag tagcagaacg ccttaattga cttttccaat
     6301 cattagcatt taaaacaccg gttctgctat caatcatttc aaatacttct tcgtttgtaa
     6361 catcttccaa acaaaaacct ccatttctaa ctgtttttac tatctttttt caaaatactt
     6421 ttaaaagtat tatttacttc actttgatta ataggtggtt tgcatacact cgcccacgca
     6481 ctcactaacc cataaactaa gtttggatct acatacctac gcaaaagata acctgtaatt
     6541 gaagccaatg ttgaattgcg ctctccctca cttacaccaa aagctatatc tcgccaatac
     6601 gcactatcac gtcgtgtgta ccctttgata ttaggactac catttgattg tttatactcc
     6661 tttgaccact gttcgagcat atcaacatcc ataattggac agtcattcac tcgcttaata
     6721 aatatgtgtc ctttttgaat aactggtaac gcaaaacatc tacttggctg atacgaacct
     6781 tcatccactt tatggccaat tttatttgct aatacttttg tatatttacg ataatcatct
     6841 gcacttattc gctcatttag agggatatac aagcgtattc tagcttgttc agttgtatgg
     6901 ctaaacgatg tgtgccaata ccatgcaaca ctgcttaaaa ctgagctgat tgcgtcatgt
     6961 agttgtttta catcatttat ttcatcgtaa tcaagtacaa tcacatttct atatatgaca
     7021 tttttatcgt ttcgatgctt tttgataatt tcaccatgat catttgtatt gtctttaata
     7081 tcaccatata cagcaacacc acgtgcatac ttataatttg cttctatagg cacagacagt
     7141 ttattaacca acttactcca tttaggcatt gaaaagctct taaatgaacg tgagtctaaa
     7201 ctttcataat gtaccaccga aacttgcgta tcatatttca atttaatttc attcattttt
     7261 tgcacctcta atgaaacaac agagtaaaga tgttataata agaatgtgta atttctaaat
     7321 tactctgcta cttttattga attctttgcg tcatctgatt cctcgtcaaa gttctctgat
     7381 gacgcttttt ctatttcatg aaatttttgt ataagttcac tgaattcttt taagtacaca
     7441 tgtaataact caactgtatg ttcattttgt atacgatgtt ctaaatagct agcagaaaaa
     7501 ttaatatgtt cccgttttgt ttctaattca ttttttacaa atctatcttc aacaaaccaa
     7561 gcatgtttgg tagctacatc attaattttt tgttttatca cttcaatgtc acacattaaa
     7621 tctttaattt cccaattcat ttttattctc ctttctctaa ttgaaaatta ttctttaatt
     7681 cttgtgcgca ccatttcatt atcaattcta agtgcttttc acgactgatc tctgaaacca
     7741 cttcaatacc attaacatat tctgtgtgtt cgtaactttc caaattattc atgacactta
     7801 actcaagttg ataaaccaag tgttctatta cttctttttg ttcattattc attttctaat
     7861 cctcctgtta aattacatcc taaagttatt agccaagcat aaacgctaaa agcgacatac
     7921 atgttagata ttgctagtaa taaaattgtt aacaatgaaa ctaagcagat ataagctaaa
     7981 tacattttca ttgccttgcc tcctacatcc attttttatg acgtgccttc atgtactcct
     8041 cgaatcgtgg aatacttata acaatcattg ttgatgataa cgagtaatat aaatcatcaa
     8101 cacctttaga atctttttcc cattctttta aaatgcgatt caccgaacta tatgaaattc
     8161 caaaaatact agctagtgca ttaggtttcg caaacaaagg attcactaca acttgctttg
     8221 gttctgtaat tgtattttct ttagctggta catcatgcaa ttttgttcta gacatttaat
     8281 tcacctcctt ttaagatgtt tttacgttct tttctgggaa cgttattggt aaaaaaaata
     8341 tctaggttat ttgtttcata acctaatatt tttgccattt taataaattc attcgctcca
     8401 atatctacta ttccattttc tctctttgca taaggcgttc ttgttttcca ccccattttg
     8461 tgagccattt catcttgcgt aataccacaa gctattcttt ccgctctcaa tctttttaaa
     8521 tttagtacca cgtttacacc tcctatcgtt ctcgtttgag aactaattac aatttaccat
     8581 ttacgttctc gttcgtcaac actttttact taaaaaaatt caaaaagttt tttctttctt
     8641 atatattgta ttcttttggg aacggtgtta taatcaaatc gttcacaaat aagaacaaat
     8701 attcaattca ggagatacaa gaaatgagaa ctaatgatga aataattaca ataattaaaa
     8761 catcaatgaa agaacaaaat atgtcactaa gtgaattagc tcgtcgtgta ggtgtagcaa
     8821 aatcagcagt atcaagatat ttaaatttaa ctagagagtt cccattgaat cgcgctgaag
     8881 attttgcgaa agtacttgga ataaaaacag aatatttatt aggatttgct gaacgcgaag
     8941 aatctacaaa acaagatact atcgccgcgc acttagatgg agattttaca gaggaagaat
     9001 taattgaaat tagaaagtat gcggagttag ttagaaaagc acatcgaaat cagtaagggg
     9061 ttattgtatg tatttatacg aaaagatggt tattgaaaac aaagagatac caattgatga
     9121 tgggaagtct ttaggtaatt ttgagggtct ctatgacaat ggagttattt taattaataa
     9181 aaatttatcc gaaaggcgta aagccgaagt gttatacgaa gaacttgccc accacaagtt
     9241 gacgtatggc aatattttag accaatcgaa gttcaacaat cgcaagttcg aaaattacgc
     9301 acgtagacac ggctttatct cagcagtccc gttacgtgaa attgtagaag cttacaatta
     9361 tggcgtacgt aacttgtatg aattgtctga gtatctacaa ttaagcgaag aatacatatt
     9421 agaagcaata gaacaatata aaaagatata tggtattgga actcactatg gcgagtattc
     9481 tattacattt gagccgttga gagtttttaa atataaagaa atataaatag gagaaatgaa
     9541 aaatgagaaa attattaggt ttagcattag caagtacgtt aattttaggc gcttgtggta
     9601 gcaacgacgg agataagaaa gaagaaagca agagctatac tacaaatgat atcgttaaag
     9661 gttttaaaga taataaatta aatgttatca atgaaaaaga aatgacacgt gaagactttg
     9721 ggcttgctcc aatgaagacg gacgaagcta aaatgtttgt tgttcaagat gataaaaatg
     9781 ctagagtaat gaaatttaaa aatagtgatg atctaaaaca aactaaaaaa tattacgatg
     9841 aattaggtaa agaaagtgca gctttctatt cacataccca ttctaaaggt aagtttttaa
     9901 tacaaatgaa cggtgatatc gatgatgcta ctttcaataa atacaagaat tctatggata
     9961 aaacattaaa gtgatgggaa aagttgtatt gtgattaaaa atgcctatat ggcgttgtaa
    10021 tataaaaaaa aggagccatc aaaatgaata aaatatttag aatactcact gttagcttgt
    10081 ttttcttcac atttttaata aaaaacaatc tagcatatgc tgatgtaggg gtaatcaacc
    10141 ttagaaactt ttatgctaat tatgaacctg aaaagcttca aggagttagt tctggaaatt
    10201 tttctacttc tcatcaatta gagtatattg atggaaaata cactttatat tcacagtttc
    10261 ataatgaata tgaagcgaag agattaaaag atcataaagt agatatcttt ggaataagtt
    10321 actcaggtct ttgtaataca aaatatatgt atggtggaat tacgttggcg aatcaaaatt
    10381 tagataaacc tagaaatata cctattaatc tctgggtcaa tggtaagcaa aatactatat
    10441 ctacagacaa agtttctact caaaaaaaag aggtaactgc tcaagagatt gatattaagt
    10501 tacgaaaata cctacaaaac gaatacaata tatatggttt taataaaaca aaaaaaggtc
    10561 aggaatatgg atatcagtca aaatttaatt ctgggtttaa caaaggaaaa attactttcc
    10621 atttaaataa tgaaccttct tttacatacg atttgtttta caccggaact ggtcaagcag
    10681 agagtttttt aaaaatttac gatgataata aaactataga tacagagaat tttcatttgg
    10741 atgtagagat ttcatatgag aagactgaat aaatataatt taaggagaaa aggcaatgaa
    10801 aaaattaata agcatcttat taataaatat aataatttta ggtgtctcta atagtgccag
    10861 cgctcaaggt gatataggaa ttgataatct caggaatttt tatacaaaaa aagacttcgt
    10921 agatttaaaa gatgtaaaag acaatgatac tcctatagct aatcaactac aattttcaaa
    10981 tgaatcttat gatttaattt cagaatcaaa agattttaat aaatttagta atttcaaggg
    11041 aaaaaaactt gatgtttttg gtattagtta taatggccag tgtaacacta aatacatata
    11101 tggcggagtc acagctacta acgaatatct agataaatct agaaatatac ctataaatat
    11161 atggattaat ggaaatcaca aaactatttc taccaataaa gtttcgacaa ataaaaaatt
    11221 tgttgccgct caagagattg atgtcaaatt aagaaagtac cttcaagaag aatacaacat
    11281 ttatggacat aacggcacta aaaaaggaga agaatatggt cataaatcaa aattttattc
    11341 tggatttaat attggtaaag taacgttcca tttaaataat aatgacactt tttcatatga
    11401 tttattctac acaggagatg atgggttacc aaaaagtttt ttaaaaattt acgaagacaa
    11461 taaaactgta gagtctgaga aattccattt ggatgtcgat atttcttata aagaaacgat
    11521 ataaatctat taattatatt ataatcatta tttttcgggt agcccgccta cccttattat
    11581 ttttttgcca attttgagga gggataagca aaatgtggtt agaaaaattt aaaaataaga
    11641 ataaagaaac taaatataga tattacgaga agtacaaaga ccctctcact gccaaatgga
    11701 gacgtgttag cgtggtactt aataagaatg gtaagcaatc acaaaaagaa gctcaaagac
    11761 tcttaaatga gcgtatagaa gcaaaactga atgataagac acctactaca cttaagtcac
    11821 taactttcca tgtcgcatgt gatgagtggt ttcagagtta tatcaaaacg tctgggtcaa
    11881 aaagaacaac tattaaaact aaattgagta agctaaacac tttgaagaaa tttgtagatg
    11941 aagatatttt aatcaataaa ataacacttt catatgcgca acaagttttc gatgaaatgg
    12001 ataataaagg ttatgtatat caagtaaaca aagatgcgtt aagcatattc aaaaatgtat
    12061 ttgaatacac tagacgtatc tataaactgc aagatttaga atttttaaaa gatataacgt
    12121 taaataaaag aattaagtct tatgatgaag tgaaagctaa acgtaataag tacctcgaat
    12181 taaatgaaat acaatctatc atcaaagata ttaatacgaa ggctcagaag atgcactcag
    12241 gtatccataa gcggttttat ttattcgttg cactcatgac agaattccaa gccttaaatg
    12301 gtatgcgtat tggtgaaatg ttagccattc aaaatgaaga tatagacttt gataataaga
    12361 gtttaaatat taacggaaca atccattggt ttcacgatga atctggtgga ttcggtgtaa
    12421 aagataccac taaaacagag tctagttata gaacaattgg attgagtagc agaagttgcg
    12481 agatattaaa gaaagcaata ctggagaaca aaaaggattc aaaatggaat gatggatatc
    12541 taaatagaaa ttttgtattt actaatcata aaggcaaccc aatgcagact gaaagattca
    12601 ataaaatcct tagggaagca gctaaagatg ttggtattga taaagaagtt tcttcacata
    12661 tattaagaca tagccacata tcattactct ctcaacaagg cgtgtcactt aaagctatta
    12721 tggatcgtgt aggccattcc gaccaccgta caacactttc catttattct cacgttactg
    12781 aacagatgga taaggatatg atgaacaaac ttgaacaggt aaaacttgga taatgcgctc
    12841 aaatctgagc gtattttttg tttgaaattc gataatttgc atataccgcc ccttttgcgc
    12901 ccttttttta ttttcaatac cacaaaaata accccttaat cgttttcatt aaagggtatt
    12961 tctatttaat tgatattatt tagcaggaat aactgcaccg ttgtattttt cattaatgaa
    13021 gtcttgaata tctttagatt gtaatacttc aattaatgct ttgattttct tatcatcttg
    13081 atgtccttct ttaacagcaa ttaagtttgc ataaggatta tctttcgcac tttctacagc
    13141 aatagaatct tttttaggat ttaatttttg ttcgattgca aagtttgaat taatgataac
    13201 agcatccgcg tcttcatttt gataaatttt aggtaagaat tctgctgatt gtttattatt
    13261 aaacttaata tcttttttat tctctgtaat atcactaaac ttagcatctt caatttttac
    13321 gccttttttg attttaatca aacctgcatc aacgaagaat tttaagaaac gtccttgttc
    13381 agctggatta ttagacacat agactgttgc accttttggt aattctttta aacttttata
    13441 ctttttagag tatacagcca taggttctaa gtgaacatca ccggcactta cgattttgta
    13501 acctttatcc tttttctctg tgtttaaata tggtgtatgt tggaaatagt ttgcgtcaat
    13561 ttcacctttg tctagtaatt tattaggcgt agtgtaatcg ttaattgttt taatatctag
    13621 ttcataacct tttttctcta ataatggttt tgctttttct aaaatttcag catgtggtgc
    13681 tggtgaagca cctactgtta ttttcttgtc gtcactgcca cttttgcttc cattaccgca
    13741 agctgctaat acaactgcaa atgttaatac taaaataaga ccaaataatt ttttcataaa
    13801 atgaaacccc caatttatcg tttatcaagt ttatttgtaa gccaatcccc aatgaattgg
    13861 attataaata caataattaa aataaaaact gttgatacta aaatgacatc attttgattt
    13921 cgagtgaaac ctgttaagta tgctaaattt cctaaaccac cggcaccaat tacacctgca
    13981 actgccgttg aaccaactaa agcgattgct gtaactgtaa tgccagacac tagcgctggc
    14041 atggcttcag gtaagaggac tttacgaatt actgtccaag tattagcacc cattgaccag
    14101 gccgcttcga tgacaccttt atcaatttct ttaaaagcaa tttctacgag ccttgcataa
    14161 aacggcgctg cgccaatgat caaggctggt aacgcacctg tcggaccact tatcgttcca
    14221 agtatcaaac ttgtaaatgg aattaataat aaaattaaaa taataaatgg tatcgctcta
    14281 aataagttaa caataaaaga aacgatagaa taaaataacc ttgcaccgat agacttacct
    14341 ttagcagaca agaataataa cacacctaaa ataagaccga gtataaatgc aaatatagtt
    14401 gagacaactg tcatgtatag tgtttcgact attgcagtcc aaacttctgg ccactgaata
    14461 ttaggcattg taatcatttc atttataatt tcactaaatg atttacccat gtcttaacac
    14521 ctccatttta acttgtcgct caattaactc tttttcgaat tttccgaaat ctacacttga
    14581 aatatatgga atatgcagaa ctaaaaagcc gactgttcca ttttttgtat ttttaatatt
    14641 tgcttctaaa atattaattt taatatcata ggcagttgat agactcgata caataggctc
    14701 ggttgttgtt gaaccagcga aaactaatct aacgatataa gcatcttttt ctaatggctc
    14761 taattctgtt aaagatgttt cgaaatcatc atttaaatct tctttcacaa atcgttttgt
    14821 cacagtgtgt tgcggatttt caaaaacctg tgttaccggt ccatgttcta tcactttacc
    14881 actttccata actgcaactt catcacaaat acgacgaatg acatgcattt catgcgtaat
    14941 tagtacaatt gttaaatttt gttgttctct aatttttagt agtagatcta aaatttcatc
    15001 tgttgtttgc ggatcaagtg cacttgttgc ctcatcacaa agcaagaccg ttggatcatt
    15061 agctaacgct cgtgcaatcc caacacgttg cttttgtccg cctgataact ctgatggata
    15121 agccttttct ctacctttta aaccgacgag ttcgacaagt tctaatgctt tttgctttgc
    15181 tctccttcta gggacacctg caatttcaag cggaaacata atatttttta acacagtcct
    15241 tgaccataac aaattaaaat gttggaagat catacttact ttttgtcttt ttgctcttaa
    15301 tccatttttg gacaattggc ctatatggtc tccatctata ataacttcac ctgatgtagg
    15361 cgcttctaaa tgattaaaca ttcgaatcaa agtacttttt cctgctccag aaaaaccaat
    15421 gacgccataa atcgatcctg ctcgaatcga taaattaacg tgatctacag caaggacttc
    15481 tttattttta gtccgatatt ctttaacaac ttcttttaat tcaatcacgt tgattcctcc
    15541 ctgtgttgct taataaaata aaaaatgctt tctcaatatc gatagaaaaa ttgagaaagc
    15601 aatagtagta ttgtttctct catcttcaaa agttaaaact ttatgtgaat tggcaccatt
    15661 tctatataag acggttgccg ggcttcgtag ggcacatccc tccaccactc tcgataagag
    15721 tttacgcatc atttaatttg tattaatcct aacacctaag taaaatttcg tcaataacta
    15781 ttttaaattt tctaacaaat cagtcaccga tttaaatgca taaattcgtt ttacttcttt
    15841 atctttattc atcaacaata aaatcggcgt agacatgatt tgcatatctt tacaaaactg
    15901 aggataaaag tttaaatcta ttttcaataa tggcaactgc aatatttcat tagcaatgtc
    15961 taacattctt tctgaaacct tacaagtacc acaagttggt gtataaccaa agattaaatg
    16021 tttgtcttcc tcataaaatg tagttacatc tttgatgtct aatgaattat tcatttacta
    16081 aaactaacct ttcattattt atattcggta agaaaggtgt ttctttctta caagtaaagc
    16141 catgttttga aagtacatgt gccaaatatt gtttggggca attcgcaact tgacagtaag
    16201 ttttatcaat aaatatatgt tcgctttcac tcaaataacg tttaaaccaa tttctaattc
    16261 gatctccttc gtcatcagaa tcggctaata caaaaacttg tttatcatat agtgattcta
    16321 tcatatcatc aagcttatct atactcattg ttccatgagt acaaataata ttgactggtt
    16381 ctgcaataac ctgttgcacc ctttttttat cagattttcc ttcaacaatt atcactttat
    16441 ttacaatagc catcatcatc accctttaaa atcaataaac atctgtcact gtatcatttc
    16501 acaaaattgg tatgaataaa acataaatca caaaaattta aactagctta atataataat
    16561 tacaaaatca atgtttgact agctgggata ttttacataa acagacaaag gctaaaccat
    16621 aaatcaacat cctaaaatct acaatgttat attaccaata gttaaccaaa agaaaataca
    16681 cctataacaa gcatttttca attatagtgg ggccccaaca t
//
LOCUS       DALMNS010000066        16416 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.066, whole genome shotgun sequence.
ACCESSION   DALMNS010000066 DALMNS010000000
VERSION     DALMNS010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 16416)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16416)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16416
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.066"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            28..1638
                     /locus_tag="O6Y56_001747"
     CDS             28..1638
                     /locus_tag="O6Y56_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MutS family DNA mismatch repair protein"
                     /protein_id="HDB5575001.1"
                     /translation="MSTNQTFLIFVIAIIILTSVIGIVGRYMSRQRLLKSMETLWQTL
                     SPLEAFIRPNSHFDYEYKLYKDKFESHSLVDDKTWSDLNMNAIFHKMNYNLTSIGEMK
                     LYACLRGMLSITNKSLLSLFNDNAEFRKNVTYHLALIGKTVYPTFPDQITTVKRQNIL
                     FLCPFLPVISFAVIFINSQVGILLFLMSCLFNIILSATLKRTYEDDLKSIFYASNVLK
                     QGYTISKIKHAPQPEVNFKQFRTARHLTSVLAEVNDEDIGAMVIKLVKLIFMLDYVLF
                     HSIQKSYTTHMNELKNCFDYIAELDNHYALAMYRRTLECYTEPQIDDSNDGIVFSELT
                     HPLIADAVANDFSLSQNILLTGSNASGKSTFMKSIAINIILASAIQTVTASKFVYQPG
                     IVFTSMANADDVLSGDSYFMAELKSIKRIVEIPDNQKIYCFIDEIFKGTNTTERIAAS
                     ESVLSFLHEKSNFRVIAATHDIELAELLKQRYENYHFNEVIENNNIHFDYKIKPGKAN
                     TRNAIELLKITSFPAKIYERAKDNVSNG"
     gene            complement(1947..2972)
                     /gene="tsaD"
                     /locus_tag="O6Y56_001748"
     CDS             complement(1947..2972)
                     /gene="tsaD"
                     /locus_tag="O6Y56_001748"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDB5575002.1"
                     /translation="MTKDILILAVETSCDETSVSVIKNGRDILSNTVLSQIESHKRFG
                     GVVPEVASRHHVEGITTTINEALVDADVSMEDIDAIAVTEGPGLIGALLIGVNAAKAL
                     AFAYDKPLIPVHHIAGHIYANHIEEPLTFPLIALIVSGGHTELVYMKDHLTFEVIGET
                     RDDAVGEAYDKVARTIGLNYPGGPQVDRLAAEGEDTYSFPRVWLDKDSYDFSFSGLKS
                     AVINQLHNQRQKNIPIIEANVATSFQNSVVEVLTFKAIQACKEYGVQRLIVAGGVASN
                     KGLRQSLADQCKINDIQLTIPSPKLCTDNAAMIGVAGHYLYQQGRFADLALNGHSNID
                     LEEYSAE"
     gene            complement(2965..3429)
                     /gene="rimI"
                     /locus_tag="O6Y56_001749"
     CDS             complement(2965..3429)
                     /gene="rimI"
                     /locus_tag="O6Y56_001749"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001611465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HDB5575003.1"
                     /translation="MDQQSKEQLNIREMTKEDVPQVFDIERRSFNDSSWTIDAFYHEI
                     EQNNFAKYFILEFEQQIIGYLGLWIVIDQAQITTVAIDDNYRGYGLGQMLLKYGINYA
                     SHTCDVMSLEVRVNNKVAQHVYENLGFQYGGKRKNYYGEGEDAMVMWVNLND"
     gene            complement(3402..4064)
                     /gene="tsaB"
                     /locus_tag="O6Y56_001750"
     CDS             complement(3402..4064)
                     /gene="tsaB"
                     /locus_tag="O6Y56_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HDB5575004.1"
                     /translation="MNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAIS
                     QLFEQSKIAKQQLDAIIVAEGPGSYTGLRIGVTVAKTLAYALDVKLYGVSSLKALAST
                     IDHTDKLLVPVFDARRQAVYTGIFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIY
                     IGKDTVKLQDELQGDVIAQLPNASVMYQLIDKPSDVHTFTPKYHKLAEAERNWINSQK
                     NN"
     gene            complement(4045..4506)
                     /gene="tsaE"
                     /locus_tag="O6Y56_001751"
     CDS             complement(4045..4506)
                     /gene="tsaE"
                     /locus_tag="O6Y56_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000590797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDB5575005.1"
                     /translation="MIKINNLDEMNHFAMFLVEQLKSGDLILLNGDLGAGKTTLTQFI
                     GKALGVRRTINSPTFNIIKSYRGKNLKLHHMDCYRLEDSDEDLGFDEFFEDQAITVIE
                     WSQFIKDLLPATHLSINISTISENTRQIELFAQGEHYEQIKEAIIHEFAAH"
     gene            4544..4699
                     /locus_tag="O6Y56_001752"
     CDS             4544..4699
                     /locus_tag="O6Y56_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575006.1"
                     /translation="MIIHCSIVFNFIFNLYIVTNFNLNFLSLKQIISSKLIVRKFKIF
                     VDILKQI"
     gene            5017..6705
                     /gene="ilvD"
                     /locus_tag="O6Y56_001753"
     CDS             5017..6705
                     /gene="ilvD"
                     /locus_tag="O6Y56_001753"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDB5575007.1"
                     /translation="MRSDMIKKGDHQAPARSLLHATGALKSPTDMNKPFVAICNSYID
                     IVPGHVHLRELADIAKEAIREAGAIPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADA
                     AETVINAHWFDGVFYIPNCDKITPGMILAAMRTNVPAIFCSGGPMKAGLSAHGKALTL
                     SSMFEAVGAFKEGSISKEEFLDMEQNACPTCGSCAGMFTANSMNCLMEVLGLALPYNG
                     TALAVSDQRREMIRQAAFKLVENIKNDLKPRDIVTREAIDDAFALDMAMGGSTNTVLH
                     TLAIANEAGIDYDLERINAIAKRTPYLSKIAPSSSYSMHDVHEAGGVPAIINELMKKD
                     GTLHPDRITVTGKTLRENNEGKEIKNFDVIHPLDAPYDAQGGLSILFGNIAPKGAVIK
                     VGGVDPSIKTFTGKAICFNSHDEAVEAIDNRTVRAGHVVVIRYEGPKGGPGMPEMLAP
                     TSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAASGGPIALIEDGDEITIDLTN
                     RTLNVNQPEDVLARRRESLTPFKAKVKTGYLARYTALVTSANTGGVMQVPENLI"
     gene            6733..8502
                     /gene="ilvB"
                     /locus_tag="O6Y56_001754"
     CDS             6733..8502
                     /gene="ilvB"
                     /locus_tag="O6Y56_001754"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HDB5575008.1"
                     /translation="MSKTQHEVNQNIDPLKMAESLEPEQLNEKTLNDMRSGSEVLVEA
                     LLKENVDYLFGYPGGAVLPLYDTFYDGKIKHILARHEQGAVHAAEGYARVSGKTGVVV
                     VTSGPGATNVMTGITDAHCDSLPLVVFTGQVATPGIGKDAFQEADILSMTSPITKQNY
                     QVKRVEDIPKIVHEAFHVANSGRKGPVVIDFPKDMGVLATNVDLCDEINIPGYEVVTE
                     PENKDIDTFISLLKEAKKPVVLAGAGINQSKSNQLLTQFVNKHQIPTVTTLLGLGAVP
                     YEDTLFLGMGGMHGSYASNMALTECDLLINLGSRFDDRLASKPDAFAPNAKIVHVDID
                     PSEINKVIHVDLGIIADCKRFLECLNDKNVETIEHSDWVKHCQNNKQKHPFKLGEEDQ
                     VFCKPQQTIEYIGKITNGEAIVTTDVGQHQMWAAQFYPFKNHGQWVTSGGLGTMGFGI
                     PSSIGAKLANPDKTVVCFVGDGGFQMTNQEMALLPEYGLDVKIVLINNGTLGMVKQWQ
                     DKFFNQRFSHSVFNGQPDFMKMAEAYGVKGFLIDKPEQLEEQLDAAFAYQGPALIEVR
                     ISPTEAVNPMVPSGKSNHEMEGL"
     gene            8502..8756
                     /locus_tag="O6Y56_001755"
     CDS             8502..8756
                     /locus_tag="O6Y56_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HDB5575009.1"
                     /translation="MTRILKLQVADQVSTLNRITSAFVRLQYNIDTLHVTHSEQPGIS
                     NMEIQVDIQDDTSLHILIKKLKQQINVLTVECYDLVDNEA"
     gene            8878..9897
                     /gene="ilvC"
                     /locus_tag="O6Y56_001756"
     CDS             8878..9897
                     /gene="ilvC"
                     /locus_tag="O6Y56_001756"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001825891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDB5575010.1"
                     /translation="MEEFIMTTVYYDQDVKTDALQGKKIAVVGYGSQGHAHAQNLKDN
                     GYDVVIGIRPGRSFDKAKEDGFDVFPVAEAVKQADVIMVLLPDEIQGDVYKNEIEPNL
                     EKHNALAFAHGFNIHFGVIQPPADVDVFLVAPKGPGHLVRRTFVEGSAVPSLFGIQQD
                     ASGQARNIALSYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGVSKLIQSGFETL
                     VEAGYQPELAYFEVLHEMKLIVDLMYEGGMENVRYSISNTAEFGDYVSGPRVITPDVK
                     ENMKAVLTDIQNGNFSNRFIEDNKNGFKEFYKLREEQHGHQIEKVGRELREMMPFIKS
                     KSIEK"
     gene            9927..11456
                     /locus_tag="O6Y56_001757"
     CDS             9927..11456
                     /locus_tag="O6Y56_001757"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDB5575011.1"
                     /translation="MSSHIQIFDTTLRDGEQTPGVNFTFDERLRIALQLEKWGVDVIE
                     AGFPASSTGSFKSVQAIAQTLTTTAVCGLARCKKSDIDAVYEATKDAAKPVVHVFIAT
                     SPIHLEHKLKMSQEDVLASIKEHVTYAKQLFDVVQFSPEDATRTELPFLVKCVQTAVD
                     AGATVINIPDTVGYSYHDEYAHIFKTLTESVTSSNEIIYSAHCHDDLGMAVSNSLAAI
                     EGGARRIEGTVNGIGERAGNAALEEVALALYVRNDHYGAQTALNLEETKKTSDLISRY
                     ASIRVPRNKAIVGQNAFSHESGIHQDGVLKHRETYEIMTPQLVGVSTTELPLGKLSGK
                     HAFSEKLKALGYDIDKEAQIDLFKQFKAIADKKKSVSDRDIHAIIQGSEHEHQALYKL
                     ETLQLQYVSSGLQSAVVVVKDNEGHIYQDSSIGTGSIVAIYNAVDRIFQKETELIDYR
                     INSVTEGTDAQAEVHVNLLIEGKTVNGFGIDHDILQASCKAYVEAHAKFAAENVEKVG
                     N"
     gene            11459..12505
                     /gene="leuB"
                     /locus_tag="O6Y56_001758"
     CDS             11459..12505
                     /gene="leuB"
                     /locus_tag="O6Y56_001758"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDB5575012.1"
                     /translation="MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFG
                     GASIDTFGEPLTEKTLNACKRADAILLGAIGGPKWTDPNNRPEQGLLKLRKSLNLFAN
                     IRPTTVVKGASSLSPLKQERVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTYTRE
                     EIERIVHVAFKLAASRRGKLTSVDKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDA
                     CSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGS
                     APDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQTTADLGGKLN
                     TTDIFEILSQKLNH"
     gene            12519..13889
                     /gene="leuC"
                     /locus_tag="O6Y56_001759"
     CDS             12519..13889
                     /gene="leuC"
                     /locus_tag="O6Y56_001759"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDB5575013.1"
                     /translation="MGQTLFDKVWNRHVLYGKLGEPQLLYIDLHLIHEVTSPQAFEGL
                     RLQNRKLRRPDLTFATLDHNVPTIDIFNIKDEIANKQITTLQKNAIDFGVHIFDMGSD
                     EQGIVHMVGPETGLTQPGKTIVCGDSHTATHGAFGAIAFGIGTSEVEHVFATQTLWQT
                     KPKNLKIDINGTLPTGVYAKDIILHLIKTYGVDFGTGYALEFTGETIKNLSMDGRMTI
                     CNMAIEGGAKYGIIQPDDITFEYVKGRPFADNFAKSVDKWRELYSDDDAIFDRVIELD
                     VSTLEPQVTWGTNPEMGVNFSEPFPEISDINDQRAYDYMGLEPGQKAEDIDLGYVFLG
                     SCTNARLSDLIEASHIVKGNKVHPNITAIVVPGSRTVKKEAEKLGLDTIFKNAGFEWR
                     EPGCSMCLGMNPDQVPEGVHCASTSNRNFEGRQGKGARTHLVSPAMAAAAAIHGKFVD
                     VRKVVV"
     gene            13890..14471
                     /gene="leuD"
                     /locus_tag="O6Y56_001760"
     CDS             13890..14471
                     /gene="leuD"
                     /locus_tag="O6Y56_001760"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDB5575014.1"
                     /translation="MAAIKPITTYKGKIVPLFNDNIDTDQIIPKVHLKRISKSGFGPF
                     AFDEWRYLPDGSDNPDFNPNKPQYQGASILITGDNFGCGSSREHAAWALKDYGFHIII
                     AGSFSDIFYMNCTKNAMLPIVLEKNAREHLAKYVEIEVDLPNQTVSSPDKSFHFEIDE
                     TWKNKLVNGLDDIAITLQYESLIEKYEKSLYGS"
     gene            14477..15745
                     /gene="ilvA"
                     /locus_tag="O6Y56_001761"
     CDS             14477..15745
                     /gene="ilvA"
                     /locus_tag="O6Y56_001761"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase IlvA"
                     /protein_id="HDB5575015.1"
                     /translation="MTVKTTVSTKDIDEAFLRLKDIVKETPLQLDHYLSQKYDCKVYL
                     KREDLQWVRSFKLRGAYNAISVLSDEAKSKGITCASAGNHAQGVAYTAKKLNLNAVIF
                     MPVTTPLQKVNQVKFFGNSNVEVVLTGDTFDHCLAEALTYTSEHQMNFIDPFNNVHTI
                     SGQGTLAKEMLEQAKSDNVNFDYLFAAIGGGGLISGISTYFKSYSPNTKIIGVEPSGA
                     SSMYESVVVNNQVITLPNIDKFVDGASVARVGDITFEIAKKNVDNYVQVDEGAVCSTI
                     LDMYSKQAIVAEPAGALSVSALENYKDHIKGKTVVCVISGGNNDINRMKEIEERSLLY
                     EEMKHYFILNFPQRPGALREFVNDVLGPQDDITKFEYLKKSSQNTGTVIIGIQLKDHD
                     DLIQLKQRVNHFDPSNIYINENKMLYSLLI"
     gene            complement(15822..16238)
                     /locus_tag="O6Y56_001762"
     CDS             complement(15822..16238)
                     /locus_tag="O6Y56_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000688537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575016.1"
                     /translation="MKIFIGTMLTFLFVCSLIVCGFFAYKIYFPADAKNKSEVPNHMQ
                     ENKHEKENTHNINNNGSEANENFNNKKNRIENIQDKQKAYALMSIPRHNLPESEKAIY
                     DKVISTAIQNINNGVGNEEDFRLKEIYDGIQSVQPQ"
BASE COUNT         5494 a         2808 c         2884 g         5230 t
ORIGIN      
        1 ttattaaaaa taaataagga gatacttatg agcacaaatc aaacattttt aatatttgtt
       61 atagcaatta ttatacttac atcggtaata ggaattgttg gacgatacat gagtcgtcaa
      121 cgtcttttaa aatctatgga aacattatgg caaacacttt ctccattaga ggcttttatc
      181 agaccgaact cacatttcga ctatgagtat aagctctaca aggataaatt tgaatcacat
      241 tctttagttg atgataaaac ttggtccgat ttaaatatga atgcaatctt tcataagatg
      301 aattataatt taacatctat tggcgaaatg aaactatatg cctgtttacg tggaatgctt
      361 tcaattacga acaaatcatt acttagttta tttaatgata atgctgaatt tagaaaaaac
      421 gtaacatatc atttagcttt gattggtaaa actgtttatc caacatttcc agaccaaatc
      481 acaacggtaa aacgtcaaaa tatattgttt ctatgcccgt ttttaccagt tatctcattt
      541 gcagttatat ttattaattc acaagttggt attttattat ttcttatgag ttgcctattt
      601 aatatcattt tatctgcaac tttaaagcgt acatatgagg atgacttaaa gtctatcttt
      661 tatgcatcca atgttttaaa acaaggctat actatctcaa aaattaaaca cgctccacaa
      721 cctgaagtca attttaagca atttagaaca gcacgtcatt taacgagtgt tttagctgaa
      781 gttaatgatg aagatatcgg agctatggta attaaactag ttaaacttat tttcatgctt
      841 gattatgttt tattccattc aattcaaaaa agctatacaa cacatatgaa tgagctaaaa
      901 aattgtttcg attacatagc tgaattagat aatcattatg cattagcaat gtatcgtaga
      961 acgctagaat gctatactga accacaaatt gatgattcaa atgatggcat agtattctct
     1021 gagttaacac atccactcat agcagatgca gtagccaatg atttctcact atcacaaaat
     1081 atactgttaa ctgggtctaa tgcttcgggt aaatcaacat ttatgaaatc catagcaata
     1141 aacattattc ttgcatcggc tatacaaaca gttaccgcaa gcaaatttgt atatcaacct
     1201 ggaattgtgt tcacgtcaat ggcaaatgcc gatgatgtgt tatcaggcga tagttatttt
     1261 atggctgaat taaaatctat taagcgtatt gttgaaattc cagataatca aaaaatatac
     1321 tgctttatag atgaaatttt taaaggtacc aacacaactg aacgaattgc cgcttcagaa
     1381 tcagtactat catttttaca tgaaaaatct aactttagag ttattgcagc aacacatgat
     1441 attgaattag ctgaactctt aaaacaacgt tatgaaaatt atcatttcaa tgaggtaata
     1501 gaaaataata acatacattt tgattacaaa attaagcctg gcaaagcaaa tacacgtaat
     1561 gccatcgaat tattaaaaat cacttcattt ccagcaaaaa tatatgaacg agcaaaagat
     1621 aatgtttcca atggttaggc atgaatcttg aacatcaatc aatgttcaag tcgcaacatt
     1681 gttattttga cagtctttga ctaaataaaa atgcgcttgt aataagtttt ttcaatacta
     1741 gtccggggcc ccaacataga gaaattggaa atgaaattct acaggcaatg cgagttgggg
     1801 ttggacgacg aaataaattt tgcgaaaata tcttttctgt ctcactcccc taattgcaat
     1861 ataaaaacgt cagctatcac atgacaaaag acaatgaaca gtttcaataa tgttcatcgt
     1921 aatcatgtta ataactgacg tttattttat tctgcagaat actcttctaa atctatattg
     1981 ctgtgcccat ttaatgctaa atcagcaaat cgaccttgct gatacaaata gtggccggca
     2041 acgcctatca ttgcagcatt atctgtgcat aatttagggc tagggatagt taattgaatg
     2101 tcattgattt tgcattgatc cgctaaagat tgacgtaatc ctttattact cgccacgcca
     2161 ccagcaacaa ttaatcgctg aacaccatat tctttacaag cttgaatggc tttaaacgta
     2221 agcacctcta caacactgtt ttgaaagctc gttgctacgt tagcttcaat gattggaata
     2281 tttttttgtc gttgattgtg aagttgattg attacggcac ttttcaaccc actaaaacta
     2341 aaatcataac tatctttatc caaccaaaca cgagggaatg aataagtatc ttcaccttca
     2401 gcagccaacc gatcaacttg tggaccacct ggataattta aaccaattgt tcgtgccact
     2461 ttatcataag cctcacctac tgcgtcatct cgtgtttcac caatgacttc aaatgttaaa
     2521 tgatctttca tataaactaa ttcagtatgt ccacctgaaa caataagtgc aattagcggg
     2581 aatgttaatg gctcttctat gtgattagca tatatatgtc ctgcaatatg atgaactgga
     2641 ataagtggct tatcgtaagc aaatgccaat gctttggctg cattaacacc tattaataac
     2701 gcaccaatta gtccagggcc ttctgtaacc gctatggcat caatatcttc cattgataca
     2761 tcggcatcca ctagagcctc gtttattgtt gttgttatac cttcaacgtg atgtctactt
     2821 gccacttcgg gaacgacacc gccaaatcgt ttatgacttt caatctgact taaaactgta
     2881 tttgataaaa tatctctgcc attttttata acactaacgc ttgtttcatc acaacttgtt
     2941 tcaacagcta gtattaatat atctttagtc atttaaattc acccacataa ccattgcgtc
     3001 ctcaccttca ccataataat ttttacgttt accaccatat tgaaatccta aattttcata
     3061 tacatgttgt gccactttat tattaactct tacttctaaa ctcatcacat cacaagtgtg
     3121 acttgcatag tttattccgt attttaaaag catttgacct aaaccatagc ctctataatt
     3181 atcatcgatt gcaactgtcg taatttgagc ttgatcgata acaatccata aacctaaata
     3241 accaataatt tgttgttcaa attctaagat aaaatatttc gcaaagttat tttgctctat
     3301 ttcatgataa aatgcgtcaa ttgtccaaga actatcattg aaactccgac gctcaatatc
     3361 aaagacttgt ggcacatctt ctttggtcat ctctctaatg tttaattgtt cttttgactg
     3421 ttgatccaat ttcgttccgc ctcagctaat ttatggtatt taggagtaaa tgtatgtacg
     3481 tctgaaggtt tatctatcaa ttgatacatg actgatgcat ttggtagttg cgcaatcaca
     3541 tcaccttgta attcatcttg taattttaca gtatcttttc caatataaat aaatggttgg
     3601 tttaaatctt ctaaaaaagc tcgcaatgct tctatcgaca tatattgatc ttctaaaata
     3661 gtcactaatt gaccattttg ccactggaat atgcctgtat aaactgcttg tcgtcttgca
     3721 tcaaacacag gaaccaataa tttatcagta tgatcgattg ttgatgccaa tgcctttaat
     3781 gatgaaacac catataattt aacatctaac gcatacgcta atgttttagc aacagtaaca
     3841 ccgatacgta agccagtata tgaccctgga ccttcagcaa caataatcgc atctaattgc
     3901 tgtttagcta ttttgctctg ctcaaatagc tgactaatcg caggcattaa ttgcactgaa
     3961 tgattttgtt tagaatccgt agttatttca gctaaaactt catcgttttg catcaatgct
     4021 actgataatg gttgattcga tgtatcaatg agcagcgaat tcatggataa ttgcctcctt
     4081 aatttgttca taatgttctc cttgcgcgaa caactcaatt tgtcttgtat tttcagatat
     4141 tgttgaaatg ttaatagata aatgcgtcgc tggaagtaaa tcttttataa attgactcca
     4201 ttcaataaca gtaattgcct gatcttcgaa aaattcatca aaccctaaat cttcatcaga
     4261 atcttctaag cgataacaat ccatatgatg caattttaaa tttttacccc tatatgattt
     4321 aatgatgtta aatgtcgggg aattaatcgt acgtcttaca ccaagagctt ttcctataaa
     4381 ttgcgttaac gttgttttac ctgctcctaa atctccgtta agtaaaatca aatcaccact
     4441 tttcaattgc tcaactaaaa acatagcaaa atgattcatt tcatctaaat tatttatctt
     4501 tatcaatgtt gattctccta tattatgctt ttcattcata aaaatgatta tccattgttc
     4561 aatcgtattt aactttatat ttaaccttta tattgtaaca aatttcaact taaatttctt
     4621 atctttgaaa cagattatct cttcaaagtt aattgtaaga aaatttaaaa tatttgttga
     4681 catactaaag cagatatagt aaattaaatt tatcaaattt ttagacaatt ctaactatta
     4741 aagtgatata taccattcac ggaaggagta taataaaatg cttaatcaat atactgaaca
     4801 tcaaccgaca acttcaaata ttattatttt attatactct tcaggactcg aacgttagta
     4861 aatatttact aaacgcttta agtcctattt ctgtttgaat gggacttgta aacgtcccaa
     4921 taatattggg acgttttttt atgttttatc tttcaattac ttatttttat tactataaaa
     4981 catgattaat cattaaaatt tacgggggaa tttactatgc gaagcgacat gatcaaaaaa
     5041 ggagatcacc aagcaccagc aagaagtctt ttacatgcca cgggcgcgct aaaaagtcca
     5101 actgatatga acaaaccatt tgtagctatt tgtaactctt atattgatat tgttcctgga
     5161 catgttcact tgagagagct tgcagatata gctaaagaag caattagaga agccggtgcc
     5221 attccatttg aattcaatac aattggtgtt gatgatggaa tagctatggg acatatcgga
     5281 atgcgatatt ctctaccatc acgtgaaatt attgcagatg cagctgaaac tgtaattaac
     5341 gctcattggt ttgacggcgt attttacatt cctaattgtg acaagatcac acccggtatg
     5401 attttagcag ccatgaggac aaacgtacca gctatctttt gctctggtgg accaatgaaa
     5461 gctggcttat ctgcacatgg taaagcatta acactttcat caatgtttga agctgtaggt
     5521 gcttttaaag aaggatcgat ttctaaagaa gaatttttag atatggaaca aaatgcctgc
     5581 cctacttgtg gttcatgtgc tgggatgttt actgcaaatt caatgaactg tttgatggaa
     5641 gttttaggtc tagcattacc atacaacggt actgcacttg cagtcagtga tcagcgacgc
     5701 gaaatgattc gccaagcagc ttttaaatta gttgaaaata ttaaaaatga tttaaaacca
     5761 cgtgatatcg ttactcgcga agcaattgat gatgcatttg cacttgatat ggctatgggt
     5821 ggttcaacaa acacagtact gcatacgtta gccattgcca atgaagctgg cattgattat
     5881 gacttagagc gtataaatgc tattgccaaa cgcacgccat atttatcaaa aatagcacct
     5941 agttcatcgt attcaatgca tgatgtgcat gaagctggtg gcgtcccagc aattattaat
     6001 gaattgatga agaaagatgg cacgttacac ccagatagaa tcacagttac tggcaaaaca
     6061 ttacgtgaaa ataacgaagg caaagaaatt aagaactttg atgtcattca ccctcttgat
     6121 gcaccatatg atgcacaagg tggtttatct atcttatttg gtaatatcgc ccctaaaggc
     6181 gcagttatta aagttggcgg cgttgatcca tctatcaaaa catttactgg gaaagcaatt
     6241 tgtttcaatt cgcatgatga agctgttgaa gcaatagaca atcgtaccgt tcgtgcaggc
     6301 cacgtcgttg tcattagata tgaaggacct aaaggtggac caggtatgcc tgaaatgtta
     6361 gcacctactt cctcaattgt tggtcgtggc ttaggtaaag atgttgcatt aattactgat
     6421 ggtcgttttt ccggtgccac aagaggtatt gcagttggtc atatttcccc tgaagctgca
     6481 tctggtggac caattgcctt aattgaagat ggagatgaga ttactattga cttaacaaat
     6541 cgtacattaa acgtaaacca gcctgaagat gttctggcgc gtcgccgaga atctttaaca
     6601 ccatttaaag cgaaagtaaa aacaggttat ctagctcgtt atactgccct agtaactagc
     6661 gcaaatacag gtggcgtcat gcaagtgcct gagaatttaa tttaatttat ttttatattg
     6721 gagatggtta aaatgtctaa aactcaacat gaagtaaacc aaaatattga ccctttaaaa
     6781 atggctgaat cacttgaacc tgaacaacta aatgaaaaaa ctttaaatga catgcgttca
     6841 ggatcagaag tgctagtaga agctctactt aaagaaaatg tggattattt attcggttat
     6901 cctggtggtg ccgtactacc tttatacgac acattttatg atggtaaaat caaacatatt
     6961 ttagcaagac acgaacaagg tgctgttcat gctgcagaag gttatgcacg tgtatctggt
     7021 aaaactggcg tcgttgtagt tacaagcggt ccaggtgcaa caaatgtaat gacaggtatt
     7081 acggatgcac attgcgactc tttacctcta gttgtattca ccggacaagt tgctacacca
     7141 ggtattggta aagatgcatt ccaagaagcg gatattctat ctatgacttc accaattaca
     7201 aaacaaaatt atcaagtgaa acgtgttgaa gatatcccta aaatcgtaca cgaagctttc
     7261 catgtagcta attctggacg caaaggtcct gtagtgattg attttccaaa agatatggga
     7321 gttttagcta caaatgtgga tttatgcgac gaaatcaata ttccaggtta tgaagttgtt
     7381 acagaaccag aaaataaaga cattgacact ttcatctcac ttttaaaaga agcgaaaaag
     7441 cctgtcgtat tagccggcgc aggtattaat caatcaaaat caaatcaatt attaacacag
     7501 tttgttaata aacatcaaat cccaacagtt actactttac taggtctagg tgcagtacct
     7561 tatgaggata cactattttt aggtatggga ggtatgcatg gttcttatgc tagtaacatg
     7621 gcattaactg agtgtgattt actcattaat ttaggtagcc gcttcgatga tagattagca
     7681 agcaaaccag atgcctttgc acctaacgcc aaaattgtac atgtagatat tgatccttca
     7741 gaaatcaata aagttattca tgtagattta ggtattattg cagactgtaa acgattttta
     7801 gaatgtttaa atgataaaaa tgttgagact attgaacaca gtgactgggt taaacattgt
     7861 caaaataata agcagaaaca cccgtttaaa cttggcgaag aagatcaagt attttgtaag
     7921 ccacaacaaa caatcgaata tatcggcaaa attacaaatg gtgaagcaat tgttactaca
     7981 gacgtgggac aacatcaaat gtgggcagct caattttatc catttaaaaa tcacggacaa
     8041 tgggttacaa gcggtggttt aggaacaatg ggattcggta ttccttcgtc aattggtgcc
     8101 aaattagcta atcctgataa aacagtcgtt tgtttcgtcg gtgacggtgg tttccaaatg
     8161 acaaaccaag aaatggcact attacccgaa tatggtttag atgtcaaaat cgtactaatc
     8221 aataatggaa cattaggtat ggttaaacaa tggcaagata agttctttaa tcaacgcttc
     8281 tcacactcag tatttaatgg tcaacctgat tttatgaaaa tggcagaagc atatggcgtc
     8341 aaaggtttct taatcgataa gccagaacaa ctggaagaac aattagatgc agcgtttgct
     8401 tatcaaggac cagctttaat tgaggttcgt atttccccta ctgaagctgt aaacccaatg
     8461 gttccgagtg gtaaatcaaa tcatgaaatg gagggcttat aatgacaaga attcttaaat
     8521 tacaagttgc ggatcaagtc agcacgctaa atcgaattac aagtgctttt gttcgcctac
     8581 aatataatat tgatacatta catgttacac attctgaaca acccgggatt tctaacatgg
     8641 aaattcaagt cgatattcaa gatgatacat cacttcatat tttaattaaa aaattaaaac
     8701 aacaaattaa tgttttaacg gttgaatgct acgaccttgt tgataacgaa gcttaatttt
     8761 aagacaaagg caatgatgcg ctaattagtt atagatatat cataggctgc tagttaacat
     8821 ctgccactat tacaaagtta tatttcagaa ttttcgaaaa acaaaacatt taattatttg
     8881 gaggaattta ttatgacaac agtttattat gatcaagatg taaaaacgga cgctttacaa
     8941 ggcaaaaaaa ttgcagtagt aggttatgga tcacaaggcc acgcgcatgc acaaaactta
     9001 aaagacaatg gatatgatgt agtcatcggt attcgcccag gtcgttcttt tgacaaagct
     9061 aaagaagatg gatttgatgt gttccctgtt gcagaagcag ttaagcaagc tgatgtaatt
     9121 atggtgctat tacctgatga aattcaaggt gatgtatata aaaacgaaat tgaaccaaat
     9181 ttagaaaaac ataatgcgct tgcatttgct catggcttta acattcattt tggtgttatt
     9241 caaccaccag ctgatgttga tgtattttta gtagctccta aaggaccggg gcatttagtt
     9301 agacgtacat ttgttgaagg ttctgctgta ccatcactat ttggtattca acaagacgct
     9361 tcaggtcaag cacgtaatat tgctttaagt tatgcaaaag gtattggtgc aactcgtgca
     9421 ggtgttattg aaacaacatt taaagaagaa acagagacag atttatttgg tgaacaagca
     9481 gtactttgcg gtggtgtatc gaaattaatt caaagtggct ttgaaacatt agtagaagcg
     9541 ggttatcaac cagaattagc ttattttgaa gtattacatg aaatgaaatt aatcgttgat
     9601 ttgatgtatg aaggcggtat ggaaaatgta cgttactcaa tttcaaatac tgctgaattt
     9661 ggtgactatg tttcaggacc acgtgttatc acaccagatg ttaaagaaaa tatgaaagct
     9721 gtattaactg atatccaaaa tggtaacttc agtaatcgct ttatcgaaga caataaaaat
     9781 ggattcaaag aattttataa attacgcgaa gaacaacatg gtcatcaaat tgaaaaagtt
     9841 ggtcgtgaat tacgcgaaat gatgcctttt attaaatcta aaagcattga aaaataagat
     9901 agacctacaa tgaggagttg ttaaatatga gtagtcatat tcaaattttt gatacgacac
     9961 taagagacgg tgaacaaaca ccaggagtga attttacttt tgatgaacgc ttgcgtattg
    10021 cattgcaatt agaaaaatgg ggtgtagatg ttattgaagc tggatttcct gcttcaagta
    10081 caggtagctt taaatctgtt caagcaattg cacaaacatt aacaacaacg gctgtatgtg
    10141 gtttagctag atgtaaaaaa tctgacatcg atgctgtata tgaagcaaca aaagatgcag
    10201 cgaagccggt cgtgcatgtt tttatagcaa catcacctat tcatcttgaa cataaactta
    10261 aaatgtctca agaagacgtt ttagcatcta ttaaagaaca tgtcacatac gcgaaacaat
    10321 tatttgacgt tgttcaattt tcacctgaag atgcaacgcg tactgaatta ccattcttag
    10381 tgaaatgtgt acaaactgcc gttgacgctg gagctacagt tattaatatt cctgatacag
    10441 tcggctacag ttaccatgat gaatatgcac atattttcaa aaccttaaca gaatctgtaa
    10501 catcttcaaa tgaaattatt tatagtgctc attgccatga cgatttagga atggctgttt
    10561 caaatagttt agctgcaatt gaaggcggtg cgagacgaat tgaaggcact gtaaatggta
    10621 ttggtgaacg agcaggtaat gcagcacttg aagaagtcgc gcttgcacta tacgttcgaa
    10681 atgatcatta tggtgctcaa actgccctta atctcgaaga aactaaaaaa acatcggatt
    10741 taatttcaag atatgcaagt atccgagtgc ctagaaataa agcaattgtt ggccaaaatg
    10801 catttagtca tgaatcaggt attcaccaag atggcgtatt aaaacatcgt gaaacatatg
    10861 aaattatgac acctcaactt gttggtgtaa gcacgactga acttccatta ggaaaattat
    10921 ctggtaaaca cgccttctca gagaagttaa aagcattagg ttatgacatt gataaagaag
    10981 cgcaaataga tttatttaaa caattcaagg ccattgcgga caaaaagaaa tctgtttcag
    11041 atagagatat tcatgcgatt attcaaggtt ctgagcatga gcatcaagca ctttataaat
    11101 tggaaacact gcaactacaa tatgtctcta gcggccttca aagtgctgtt gttgttgtta
    11161 aagataacga gggtcatatt taccaggatt caagtattgg tactggttca atcgtagcaa
    11221 tttacaatgc agttgatcgt attttccaaa aagaaacaga attaattgat tatcgtatta
    11281 attctgtcac tgaaggtact gatgcccaag cagaagtaca cgtaaattta ttgattgaag
    11341 gtaagactgt caatggcttt ggtattgatc atgatatttt acaagcctct tgtaaagcat
    11401 acgtagaagc acatgctaaa tttgcagctg aaaatgttga aaaggtaggt aattaattat
    11461 gacttataac attgttgcac tacctggtga tggaatcggt ccagaaattt tgaacggatc
    11521 tctatcattg cttgaaatta taagtaataa atataacttt aattatcaaa tagagcacca
    11581 cgaatttggt ggtgcctcta ttgatacatt cggcgagcct ttaactgaga aaaccttaaa
    11641 tgcgtgtaaa agagcagatg ctattttact gggtgcaatc ggtggaccta aatggacaga
    11701 tcctaacaat cgaccagaac aaggattatt aaaattacgt aaatcattaa atttatttgc
    11761 aaatatacgc cccactaccg ttgtcaaagg cgctagttct ttatcacctt taaagcaaga
    11821 acgcgttgaa ggtacagatt tagttatagt ccgtgaattg acaagtggta tttattttgg
    11881 agaacctaga cattttaata atcacgaggc cttagattct cttacttata caagagaaga
    11941 aatagaacgc attgttcacg tagcatttaa attggccgct tcaagacgag gaaaactaac
    12001 atcagttgat aaagaaaatg tattagcttc tagtaaattg tggcgcaaag tcgtaaatga
    12061 agtgagtcaa ttatatccag aagtaacagt aaatcactta cttgttgatg cttgtagtat
    12121 gcatttaatc acaaatccaa aacaatttga cgtcatcgtt tgtgaaaact tatttggtga
    12181 tattttaagt gatgaagctt cagtgattcc tggttcactt ggtttatcac cttctgctag
    12241 ttttagtaac gatggtccaa gattatatga gcctattcat ggatcagcac cagatattgc
    12301 aggtaaaaac gttgccaatc catttggaat gattctatct ttagcgatgt gtttacgtga
    12361 aagcttaaat caaccagatg ctgcagatga attagaacaa catatttata acatgattga
    12421 acatgggcaa acgacagcag atttaggcgg caaattgaat actactgata ttttcgaaat
    12481 tctatctcaa aaattgaatc actaaggggg agatgtaaat gggtcaaaca ttatttgaca
    12541 aggtgtggaa cagacatgtg ttatacggaa aattgggcga accgcaacta ttatacattg
    12601 atttacacct tatacatgaa gttacttctc ctcaagcatt tgaaggactt aggcttcaaa
    12661 acagaaaatt aagacgccca gatttaacat ttgcaacact cgatcacaat gttcctacta
    12721 ttgatatttt caatattaaa gatgaaattg caaacaaaca aatcacaaca ttacaaaaaa
    12781 acgccataga ttttggggtg catatttttg atatgggttc tgatgaacaa ggtattgttc
    12841 acatggtagg acctgagaca ggacttacac agcctggcaa aacgatcgtt tgtggtgact
    12901 ctcacacagc aacacatggc gcatttggtg ctattgcatt tggaattgga acaagtgaag
    12961 ttgaacatgt tttcgcaact caaacgctat ggcaaacaaa acccaaaaac ttaaaaatcg
    13021 atattaatgg taccttacca acaggcgtct atgctaagga cattattctg catttaatta
    13081 aaacgtatgg tgttgatttt ggtacaggct atgctttgga atttactggc gaaacaatta
    13141 aaaacctttc aatggacggt cgaatgacta tttgtaacat ggctatcgaa ggtggtgcca
    13201 aatacggcat aatccaacct gatgatataa catttgaata tgttaaaggg agaccatttg
    13261 ccgataactt cgctaaatca gttgataagt ggcgtgagct atattctgat gacgacgcga
    13321 tatttgatcg tgtaattgaa cttgatgttt caacattaga accacaagtg acatggggga
    13381 ctaatcctga aatgggtgtt aatttcagtg aaccattccc tgaaatcagt gatatcaatg
    13441 atcaacgtgc gtatgattat atggggttag aaccaggaca aaaagctgaa gatatcgatt
    13501 tagggtatgt tttcctcggt tcatgtacaa atgctagact atcagatttg attgaagcta
    13561 gtcatattgt taaaggaaat aaagttcacc caaatattac agctattgtc gtaccaggtt
    13621 ctcgtacagt aaaaaaagaa gctgaaaaat taggtctaga tactatcttt aaaaatgcag
    13681 gatttgaatg gcgtgaacca ggatgttcaa tgtgtttagg catgaatcct gaccaagtac
    13741 ctgagggtgt acattgtgca tctacaagta atcgaaactt cgaaggacga caaggcaaag
    13801 gtgctagaac acatttagta tcccctgcta tggcagcagc agcagctatt catggtaaat
    13861 ttgtggacgt aagaaaggtg gttgtttaaa tggcagcaat caaacctatt acaacatata
    13921 aaggtaaaat agtccctctt ttcaacgaca atatcgatac agatcaaatc attcctaaag
    13981 tacatttaaa gcgtatttca aaaagtggct ttggtccatt tgcttttgat gaatggcggt
    14041 acttacctga tggttcagat aatcctgatt tcaatccaaa taagcctcaa tatcaaggtg
    14101 catccatatt aattactgga gataattttg gatgtggttc aagtcgtgaa catgcagctt
    14161 gggcacttaa ggactatggc tttcatatta ttattgctgg aagtttcagt gacatttttt
    14221 atatgaattg tacaaaaaat gcaatgttac caattgtttt agaaaaaaat gcacgtgaac
    14281 atcttgcgaa atatgttgaa attgaggtcg atttaccaaa tcaaactgtg tcatcaccag
    14341 acaagagttt ccattttgaa attgatgaaa cttggaagaa taaacttgta aatggcttag
    14401 atgacattgc aatcacccta caatatgaat cattaataga aaaatatgaa aaatcacttt
    14461 atgggagttg aatattatga cagtcaaaac aacagtttct acgaaagata tcgatgaagc
    14521 atttttaaga cttaaagata ttgtcaaaga aacaccttta caattagacc attacttatc
    14581 tcaaaagtat gattgtaaag tttatttaaa acgagaagat ttacaatggg tacgttcttt
    14641 taaattaaga ggtgcttaca acgctatttc tgttttatca gatgaagcta aaagtaaagg
    14701 tattacatgt gcgagtgcag gtaatcatgc tcaaggtgtt gcctatacag ctaaaaaact
    14761 taatttaaac gctgttatct ttatgccagt cactacacct ttacaaaagg taaatcaagt
    14821 aaagttcttt ggaaatagta atgttgaagt tgtactcact ggtgatacat ttgatcactg
    14881 tttagctgaa gctttaactt atacaagtga acatcaaatg aactttatag atccattcaa
    14941 taatgttcat acaatttctg gacaaggtac gcttgctaaa gaaatgctag aacaagcaaa
    15001 gtctgacaat gttaactttg attatctatt tgccgcaatt ggtggtggcg gtttaatttc
    15061 aggtattagt acctatttta aatcctattc tcccaacaca aaaattatcg gagttgaacc
    15121 ttcaggtgct agtagtatgt atgaatctgt tgtcgtaaat aatcaggtta tcacattacc
    15181 taatatcgat aaatttgtcg atggagcttc tgtagccaga gttggcgata ttacttttga
    15241 aattgccaaa aaaaatgtag ataactacgt acaagtagat gaaggtgctg tatgttcaac
    15301 aattttggat atgtattcaa aacaagcaat agtagcagaa cccgctggcg ctttaagtgt
    15361 aagtgcgctt gaaaactata aagatcatat taaaggtaaa acagtggttt gtgtcattag
    15421 tggtggtaat aatgatatta atcgaatgaa agaaattgaa gaacgttcat tactatacga
    15481 agaaatgaag cattacttta tcttaaattt ccctcaacgt ccaggtgcat tgagagaatt
    15541 tgtaaatgac gtattaggac ctcaagacga tattactaaa tttgaatact taaaaaaatc
    15601 ttctcaaaat acaggtactg tcattattgg tattcaactt aaagatcatg atgatttaat
    15661 acaactcaaa caacgtgtaa atcatttcga tccttccaat atttatatta atgaaaataa
    15721 gatgttatat tcattgttaa tttaacacat attaagaaaa gcagtcataa attgatttct
    15781 aattgaaatc atcttatgac tgctttttat tatgctttac attattgagg ttgcacgctt
    15841 tgtataccat cgtatatttc tttgagccta aagtcttctt cattccccac cccattattt
    15901 atattttgaa tggcagttga aattactttg tcataaatag ccttctcact ttctggtaaa
    15961 ttatgtcgtg gtatactcat caaagcatat gctttttgtt tatcttgtat gttttctata
    16021 cggttcttct tattattaaa attctcatta gcttcactac cattattatt aatattatgc
    16081 gtgttttctt tttcatgttt gttttcttgc atatgattcg ggacttctga cttattttta
    16141 gcatctgcag gaaaatatat tttatatgca aaaaatccac acactatcaa tgagcataca
    16201 aataaaaaag ttaacatcgt accaataaat attttcaaat ccgttctcct ttcaaccatt
    16261 cattcttaca tgtatattta gtatttaaaa atccttatag tctcgatttg cctggcaacg
    16321 ttctactcta gcggaacgta agttggctac catcgtcgct aaagaccttt cttgacttgt
    16381 gacaatcgct tgcttctttc ctctccttcg gctctc
//
LOCUS       DALMNS010000067        15912 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.067, whole genome shotgun sequence.
ACCESSION   DALMNS010000067 DALMNS010000000
VERSION     DALMNS010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 15912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15912
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.067"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(266..1093)
                     /locus_tag="O6Y56_001763"
     CDS             complement(266..1093)
                     /locus_tag="O6Y56_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDB5575017.1"
                     /translation="MWKWEAENDAKGVVVIAHNILEHTGRYAYVITMLRRNGYHVIMG
                     DLPGQGQTSRANKGQIENFQTYHESLLDWLKIANEYKIPTYVLGVGLGGLILLNLLEK
                     VELPIEGMMLISPMLELRKNGKNRKDKLVSNIGKISKDTRFNVGVEPKDLTRNLEIVE
                     ETVNDGLMLKKATYHWYNTINETMKDTMAHIHDIQPMPTLLMYGTKDLIVDTRAIDEF
                     KEKYQTPELYFKAWQGFYHEVHNEPERDEVMRYILTFLNNSVNTMGFIVEDDEIVEI"
     gene            complement(1096..1215)
                     /locus_tag="O6Y56_001764"
     CDS             complement(1096..1215)
                     /locus_tag="O6Y56_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575018.1"
                     /translation="MMLISFVYNNMDNNNTINRNLHSEFAIIMLLKINEKGAV"
     gene            1327..2328
                     /locus_tag="O6Y56_001765"
     CDS             1327..2328
                     /locus_tag="O6Y56_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase"
                     /protein_id="HDB5575019.1"
                     /translation="MALLKNFFIGLSNNIFLNNAAKKVGPRLGANKVVAGNTIPELIN
                     TIEYLNDKNIAVTVDNLGEFVGTVEESNHAKEQILTIMDALHQHGVKAHMSVKLSQLG
                     AEFDLELAYQNLREILLKANTYNNMHINIDTEKYSSLQQIVQVLDRLKGEFRNVGTVI
                     QAYLYDSHELVDKYQDLRLRLVKGAYKENESIAFQSKEDVDANYIKIIEQRLLNARNF
                     TSIATHDHRIINHVKQFMKENHIEKDRMEFQMLYGFRSELAEEIANEGYNFTIYVPYG
                     DDWFAYFMRRLAERPQNLSLAVKEFVKPAGLKRVGIIAALGGTVMLGLSTIKKLCRK"
     gene            complement(2450..2914)
                     /locus_tag="O6Y56_001766"
     CDS             complement(2450..2914)
                     /locus_tag="O6Y56_001766"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDB5575020.1"
                     /translation="MNFEGKLIGKDLKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNE
                     DNIDVAFVPGAFEIPLVAKKLVSSGNYDAVITLGCVIRGATSHYDYVCNEVAKGVSKV
                     NDQTNVPVIFGILTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLKSIKA"
     gene            complement(2927..4108)
                     /locus_tag="O6Y56_001767"
     CDS             complement(2927..4108)
                     /locus_tag="O6Y56_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HDB5575021.1"
                     /translation="MQFDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMDDNT
                     INFMAKEARGLICAPVSKDIAQRLDLVQMVDDNSDIFGTQFTVSIDHVDTTTGISAYE
                     RTLTAKKLIDPSSEAFDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGV
                     ICEIMNDDGTMAKGQDLQKFKEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFG
                     TFDMYGFKATYTDEEIVVLTKGAIRQHENVRLHSACLTGDIFHSQRCDCGAQLESSMK
                     YINKHGGMIIYLPQEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQ
                     ILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERIEVIVPETVHNHDYMETKKIKMGHL
                     I"
     gene            complement(4119..4751)
                     /locus_tag="O6Y56_001768"
     CDS             complement(4119..4751)
                     /locus_tag="O6Y56_001768"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDB5575022.1"
                     /translation="MFTGIVEEIGVVKSVQIRQSVRTIEIEAHKITADMHIGDSISVN
                     GACLTVIDFDPTSFTVQVIKGTENKTYLADVKRQSEVNLERAMSGNGRFGGHFVLGHV
                     DELGTVSKINETANAKIITIQCSQHINNQLVKQGSITVDGVSLTVFDKHDNSFDIHLI
                     PETRRSTILSSKKLGDKVHLETDVLFKYVENILNKDKDQLSVDKLRAFGF"
     gene            complement(4758..5801)
                     /gene="ribD"
                     /locus_tag="O6Y56_001769"
     CDS             complement(4758..5801)
                     /gene="ribD"
                     /locus_tag="O6Y56_001769"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015581873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDB5575023.1"
                     /translation="MSQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRK
                     GDKHAEVQALDMAQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKDNS
                     LDTHGDDTLRDHGIEVECVDDERASQLYQDFFKAKAKQLPQITVKVSASLDGKQANDN
                     GQSQWITNKEVKQDVYKLRHRHDAVLTGRRTVELDDPQYTTRIQDGKNPIKVILSKSG
                     NIHFNQQIYQDESTPIWIYTENPNLTTNQTHIEIIYLKSCDLTTILHNLYKRGVGTLL
                     IEAGPTTTSEFLQSNYIDEFILYYAPKLIGGSGNYQFYQTNDVIEIPDANQFEIVHSE
                     LLNQNVKLTLRKK"
     regulatory      complement(5928..6063)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            complement(6282..7784)
                     /locus_tag="O6Y56_001770"
     CDS             complement(6282..7784)
                     /locus_tag="O6Y56_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding protein"
                     /protein_id="HDB5575024.1"
                     /translation="MRVAIIGMGTAGVSVLRELVKHPKFNQLDIDLYDDKVNMGQGVP
                     FQNDSSELLINMPSKKMSLNLDDETEFWKWYKQQTDFNFDEPAYLPRFVFGHYMKSYL
                     SMFTKKYPNISTNYNKVQEIYTNSNIDETNLTYYICTTNSEKSWQAYDYVFLTCGTFA
                     YHDPYNLKGKKGYIATPYPTYNTLDEVNELDDIAIIGTGLASLDVVRYVAAHHPKLPI
                     TMTSRSAHLPSVRGTMIDVTFKYLTKDKLNDIKKHHFGNAPLDTLVSLFLKECAEYDI
                     DFKKLVHRRTGNHIADLKYDLARPTEMGIFQSMIEHLKENLNWIWNSLSIEDQHQFNQ
                     KYSKMIQLNSNPMPPRTAELIIELIENKSLILKKDLEDVKHDGKLYYFSYKNQESVDI
                     YNVVINATGAKSHLNELDQDDQLIKNLENRQIVQAHPMGGIQIIPETNQVISPRFGTL
                     TNMIAIGQMTNGVNKLRNGVKMIVEQVAHTVSQLYDALESNEQQQHSDNQ"
     gene            8306..8620
                     /locus_tag="O6Y56_001771"
     CDS             8306..8620
                     /locus_tag="O6Y56_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDB5575025.1"
                     /translation="MTYKELATYLKVLSDSSRLEILDLLSCGELCACDLLEHFQFSQP
                     TLSYHMKALVKTNLVTTRKIGNKHLYQLNHDLFESVIHNLSKVHTSNQRCICHNLKTG
                     EC"
     gene            8620..9912
                     /gene="arsB"
                     /locus_tag="O6Y56_001772"
     CDS             8620..9912
                     /gene="arsB"
                     /locus_tag="O6Y56_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite efflux transporter membrane subunit
                     ArsB"
                     /protein_id="HDB5575026.1"
                     /translation="MMTTLAILIFLVTLIFVLWQPKGLDIGITALTGAFIAVITGVVS
                     FSDVFEVTSIVWNATFTFVSVILISLILDKVGLFEWSAIHMLHASKGNGLKMFVYIIL
                     LGAIVAAFFANDGAALILTPIVLAMVKNIGFNKRAIFPFIIASGFIADTTSLPLIVSN
                     LVNIISADYFHVGFVRYFSRMFIPNLFSLLASIIVLWLYFRKAIPKTFDDNNIKRPKD
                     AINDLKLFKISWIVLVILLFGYLISEFTKIPVSIFTGIIAFIFLMLARKSNAVNIKEV
                     IKGAPWNIVLFSIGMYIVVFGLRNAGITLILAKILEYISNYGLFSTILGMGFISAFLS
                     SIMNNMPTVLIDAIAIGQSNVHGMLKEGLIYANVIGSDLGPKITPIGSLATLLWLHVL
                     TQKDVKISWGTYFKTGIIITIPVLFITLLGLYLTLIIF"
     gene            9930..10322
                     /gene="arsC"
                     /locus_tag="O6Y56_001773"
     CDS             9930..10322
                     /gene="arsC"
                     /locus_tag="O6Y56_001773"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (thioredoxin)"
                     /protein_id="HDB5575027.1"
                     /translation="MTKKTIYFIYTGNSCRSQMAEGWAKQILAEDWNVYSAGIETHGV
                     NPKAIEAMKEVGIDISNHTSDLIDNNIIKNSNLVVTLCSDADVNCPSLPTNVKKEHWG
                     FDDPAGKPWSEFQRVRDEIKIAIENFKS"
     gene            complement(10727..11581)
                     /locus_tag="O6Y56_001774"
     CDS             complement(10727..11581)
                     /locus_tag="O6Y56_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosaminidase"
                     /protein_id="HDB5575028.1"
                     /translation="MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIK
                     IEKLNVTLNDAAKKQINNYTSQQVSNKKNDAWRDASATEIKSAMDSGTFIDNKKQKYQ
                     FLDLSKYQGIDKNRIKRMLVDRPMLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVK
                     SELANGVEIDGKKYYNFYGVGALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHF
                     LSSTDQNTLYSMRWNPKNPGEHQYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYK
                     DDSKHLNK"
     gene            complement(11857..12081)
                     /locus_tag="O6Y56_001775"
     CDS             complement(11857..12081)
                     /locus_tag="O6Y56_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575029.1"
                     /translation="MDYAHLNLEHFFARNDDLDVIRDRADFVMINNFTNEMMYRDGQI
                     EGTIDLNQYYYKNRSNAASFIMMDYKKETK"
     gene            12280..12750
                     /gene="sigS"
                     /locus_tag="O6Y56_001776"
     CDS             12280..12750
                     /gene="sigS"
                     /locus_tag="O6Y56_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigS"
                     /protein_id="HDB5575030.1"
                     /translation="MKFNDVYNKHHKIIHHLLKKYNISYNYDEYYQLLLIKMWQLSQI
                     YKPSSKQSLSSFLFTRLNFYLIDLFRQQNQLKDVILCENNSPTLTEQPTYFNEHDLRL
                     QDIFKFLNHRERLWLKLYLEGYKQFEIAEIMSLSLSTIKLIKTSVKRKCQHNFN"
     gene            12863..13306
                     /locus_tag="O6Y56_001777"
     CDS             12863..13306
                     /locus_tag="O6Y56_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComK"
                     /protein_id="HDB5575031.1"
                     /translation="MQDNSTKYLLYIQTATSNHLETNCVFLHCDYILKVPINKLVSYY
                     AKLHLSSQSVLIETAKNILNINKLVPIYINAKTILFPLKHKRAPIQIYINAHYIVGMT
                     AIENSTLIHFQEGIQLEVDEPFSLVSKKCHESLALKHFIENTISN"
     gene            complement(13293..13736)
                     /locus_tag="O6Y56_001778"
     CDS             complement(13293..13736)
                     /locus_tag="O6Y56_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575032.1"
                     /translation="MNKASFDKKVKKQLWFLNKKEKQALDQRLSSISDDNSVNLNKPV
                     TFANAYLRQNVFRNKETKSYSMFVTLVVMMFAYVALLGLFLFGLITSLSGVQFFVNPK
                     VDLSTTVVILTIIGAILLMIVSIYFIKIVTSYFTKKLLEIKFNSK"
     gene            14034..14669
                     /gene="sdpA"
                     /locus_tag="O6Y56_001779"
     CDS             14034..14669
                     /gene="sdpA"
                     /locus_tag="O6Y56_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease SdpA"
                     /protein_id="HDB5575033.1"
                     /translation="MQKFKDFFYDDLSVTRGNYFLTLMAAFFITIILFIGIGASEVHL
                     LYGMLIVLVGLILLRLFKINLFSFKKLTLSQVIYIIGGALLIYGLDNLYLYFHDVPAN
                     EQQLEQEIRNTPFYISIFTVTIIPAIVEEIVFRGMIIRVIFRKHLFLGLIVSSLVFAS
                     LHESDTWIGYLPYLYSGLIFGLIYIKTKRLEVVIFMHFLNNLLALLFIIWR"
     gene            14836..15456
                     /locus_tag="O6Y56_001780"
     CDS             14836..15456
                     /locus_tag="O6Y56_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000492905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDB5575034.1"
                     /translation="MFSRNNNIFVDDLSVTKDNYLIAVLKMLVIFLVINYGTDVSYDH
                     EYIGLFIILLGVVFLKVLNINLLSFKKLKFTHMLYIIFGFLLMYGLDNLYDMFAPPTL
                     NETLIDEEFEDVPYHLALISIAIIPPITEEIICRGLIIRVLFRNHLFLGLIVSSIFFA
                     LIHESDTLIGYLPYFYSGLIFGYTYLKTKRLEVPILIHFINNLLAI"
BASE COUNT         5244 a         2677 c         2183 g         5808 t
ORIGIN      
        1 atatatttct tcaaaaaaga tacgcattga atttttatta catataactc tcatgaaaat
       61 tgattaaact aaattaatta gttagcctta aatttaacaa attaaatcaa accgaatgag
      121 gctaaattgg ttatttttca agatatgatt tgtataaatc aaaacatttc ttacaaatca
      181 aatgtgtata aaatgtgata tacattctca accttaaaaa agttaaaaaa aagatgagca
      241 tctactgtct catcttctta gaatattaaa tttctacaat ttcgtcatct tcaacaataa
      301 agcccattgt attgacgctg ttatttaaga aagtcagaat ataacgcatt acttcatcgc
      361 gttctggctc attgtgaacc tcgtggtaaa aaccttgcca agctttaaaa tataattcag
      421 gtgtttgata tttttcttta aactcatcaa ttgccctagt atcaacaatt aaatccttcg
      481 ttccatacat taatagtgtt ggcattggtt gaatgtcatg aatatgagcc atcgtatctt
      541 tcatcgtctc attaattgta ttataccaat gatacgttgc tttttttaac attaaaccat
      601 cgttaactgt ttcttcaaca atttctaaat tacgtgttaa atcttttggt tctacaccaa
      661 cattaaaacg tgtgtctttt gatattttac ctatatttga aacaagttta tctttacgat
      721 tttttccatt ctttcgaagt tctagcatag gagaaattaa catcatcccc tcgattggca
      781 attctacttt ttcaagtaaa tttaataaaa tcaaaccgcc aagtcctacc cctaatacat
      841 aagtaggaat tttatattca ttagctatct ttaaccagtc tagcaaactt tcgtgatacg
      901 tttgaaagtt ttcaatttgt cctttattag ctcttgaagt ttgaccttga ccaggcaaat
      961 ctcccataat cacatgatag ccatttcttc ttaacatcgt aataacatat gcatatcttc
     1021 ccgtatgttc taatatatta tgagcaataa caacgacgcc tttcgcatca ttttcagctt
     1081 cccacttcca cattattata ctgccccttt ttcattaatc ttcaataaca taattatagc
     1141 aaattcacta tgtagatttc tatttatagt attattgttg tccatattat tatatacaaa
     1201 tgaaatcaac atcaataata gtgtaattat acataattat ttttgattgt ttttgatgaa
     1261 aacgctttct cgaatatttt tttcatgcta aacttattgt aaacacaagg gtttggagga
     1321 gtagcaatgg cactattaaa gaattttttt atcggattat ctaataatat ttttttaaac
     1381 aacgcagcaa aaaaagtggg cccacgtttg ggtgccaata aagtcgttgc cggaaataca
     1441 attccagagt taattaatac aatcgaatac ttaaatgaca agaatatcgc tgttacggta
     1501 gacaatttag gggaatttgt cggtacagtt gaagaaagta atcatgctaa agaacaaatt
     1561 ttaacaatta tggacgccct tcatcaacat ggcgtaaagg cacatatgtc tgttaaattg
     1621 agtcagttag gtgcagaatt cgacttagaa ttagcttacc aaaatttaag agagatttta
     1681 cttaaagcaa atacttacaa caatatgcat ataaatattg atactgaaaa atattctagc
     1741 ctgcaacaaa ttgttcaagt tttagatcga ttaaaaggcg aatttagaaa tgttggtact
     1801 gtaattcaag catatttata cgatagccat gaattagttg ataagtacca agatttacga
     1861 ttacgtttgg ttaaaggtgc atataaagaa aacgaatcaa ttgcatttca atctaaggaa
     1921 gatgtagatg caaattacat caaaataatt gaacaacgtt tgttaaacgc acgcaatttc
     1981 acttcaattg caacacatga ccatcgcatc attaatcatg taaaacaatt tatgaaagaa
     2041 aatcacattg aaaaagatcg tatggaattc caaatgctct atggttttag atcagagtta
     2101 gcagaagaaa ttgcaaatga aggctataat tttactattt atgtacctta tggcgatgat
     2161 tggtttgcgt attttatgag aagattagca gaacgcccac aaaacctatc tctcgctgta
     2221 aaagaatttg tgaagcctgc tggattaaaa cgtgttggca taattgcagc tttaggaggt
     2281 acagttatgt taggtttaag tacaattaaa aaattatgcc gtaaatagag catggcataa
     2341 acaataattt aggagtctgg aacaataatc aatgttctag gctcctaaat gttatattgg
     2401 cagttctgaa tcatttataa atctttgatt atgaactctc aacagcgctc tatgctttta
     2461 tagattttaa taaattagcc atttcaattg cacttactgc tgcttcggca cctttattgc
     2521 cagctttcgt acctgctctt tccacagctt gttcaatact ttcagtcgtt aaaataccaa
     2581 atatgactgg tacattagtt tgatcattta ctttagaaac acctttcgcg acttcattac
     2641 aaacataatc ataatgagac gtagcaccgc gaattacgca tcctaatgta attactgcat
     2701 cataatttcc tgatgagact aattttttag ctactaaagg gatttcaaac gcacccggaa
     2761 caaatgctac atcaatattg tcttcattaa catcatgtcg aatcaaagta tcttttgcac
     2821 cttcaagtaa tcttccagtg ataaaatcat taaatcgact aactacgatt gcaactttta
     2881 aatcttttcc aattaattta ccttcaaaat tcatattaaa gtcctcctat attaaatgac
     2941 ccatttttat ttttttcgtt tccatataat catgattatg taccgtttct ggtacgataa
     3001 cttcaattct ttctgcaata tcaatgccat attgttttaa tccctcaaat ttacttggat
     3061 tattacttaa taaattgata tgttcgatgt taaaatattt taaaatctgt gcagcaatat
     3121 gataatctcg caaatcttca tcaaaaccta atgctaaatt tgcagttact gtatcatatc
     3181 cttgctcaat taattcatat gcgcgtaatt tgtttaacaa tcctatgcca cgaccttctt
     3241 gaggtagata aataatcatg ccgccatgtt tattgatata cttcatagac gattctagtt
     3301 gagcaccaca atcacaacgt tgactatgga aaatatcgcc tgtaaggcac gcagaatgta
     3361 agcgtacatt ttcatgttgt cgaattgcac cttttgtcag tacaactatc tcttcatctg
     3421 tgtaagtcgc tttaaaacca tacatatcaa atgttccgaa atctgtaggc attttcactt
     3481 ttgccttaaa ttcaatttct ggttctaatt ttttacgata ttcaattaaa tcatcaatcg
     3541 taatcatctt taattgatgt ttttctttaa acttttgtaa atcttgtcct ttcgccatcg
     3601 tgccgtcatc gttcataatc tcacaaatga caccagcggg cttggcacca gtaagtttag
     3661 ctaaatcaac agccgcttct gtgtgtccat ttctagctaa tacgccttta tcttgtgcta
     3721 ctaatggaaa taaatgacca ggacgattaa aatcaaatgc ctcgctacta ggatcaatga
     3781 gctttttggc agtcaatgta cgttcataag cgctaattcc tgttgttgta tctacatgat
     3841 caatactcac tgtaaattgc gtaccaaaga tgtcggagtt atcatcaacc atttgtacca
     3901 aatccaaacg ttgtgcaata tctttagaca ctggtgcgca tattaatccc cttgcttctt
     3961 tcgccataaa attaatggta ttatcgtcca tccattcagt gaccgctact aaatcacctt
     4021 cattttcacg attctcatca tctactacaa taattgtttc tccatttttt aaagccatta
     4081 aagcactgtc aatattatcg aattgcatgc tacccctcct aaaaaccaaa tgctcttaat
     4141 ttatctacag ataattggtc tttatcttta tttaaaatat tttcaacata tttaaacaaa
     4201 acgtctgttt ctaaatgtac tttatctcct aattttttgg atgataaaat cgttgaacgc
     4261 ctcgtttctg gaataagatg aatgtcaaaa ctgttatcat gtttgtcaaa taccgttaga
     4321 cttacaccat ccacagtaat agacccttgc ttaactaact gattattaat atgttggcta
     4381 cattgaatcg taataatttt ggcattggct gtttcattta tttttgaaac tgttcctagt
     4441 tcatctacat gaccgaggac aaaatgtcca ccaaacctac cgttaccact catggcacgc
     4501 tctaaattta cttctgattg tcgcttaaca tctgctaaat aggttttatt ttcagtgcct
     4561 ttaattactt gaacagtaaa agatgtcgga tcaaaatcaa tcactgttaa acatgcacca
     4621 ttaacactga tggaatcacc aatatgcata tctgccgtaa tcttatgtgc ttcgatttca
     4681 atcgtcctga ctgattgacg aatttgaaca cttttaacga cacctatttc ttcaacgatg
     4741 ccagtaaaca tgcatcatca cttctttcgt aaagttaatt taacattttg atttaataac
     4801 tcggaatgaa caatttcaaa ttggttcgca tctggtatct caatcacatc atttgtttga
     4861 taaaattgat aatttccaga tccaccaatt aatttcgggg cataatagag aataaattca
     4921 tctatataat tagattggag aaattctgaa gtagtggttg gacctgcctc gattagcaaa
     4981 gttccaactc ctcttttata taaattgtga agaattgttg ttaaatcaca agacttcaag
     5041 taaataattt caatatgtgt ttgattggtt gttaaatttg gattttctgt atatatccaa
     5101 attggtgttg attcatcttg ataaatttgc tggttaaaat gaatattccc agacttagac
     5161 aatattactt ttatagggtt ttttccatct tgaatacgtg tagtatattg tggatcatct
     5221 aattcaactg tacgtcttcc agttaacact gcgtcgtgtc gatgtcttaa cttatagaca
     5281 tcttgtttaa cctctttgtt agtaatccat tgactttgtc cattatcatt cgcttgttta
     5341 ccatctaaac ttgcagatac tttcactgta atttgtggca gttgctttgc ttttgcttta
     5401 aaaaagtctt ggtataattg tgatgcacgt tcatcatcaa cgcattcaac ctcaataccg
     5461 tgatcccgta acgtatcatc accatgtgta tctaacgaat tgtcttttgt tgcgtaaact
     5521 actttagcta tcttacaatc aattattttg ttaacacagg gtggtgttga accaaaatga
     5581 ctacatggct ctaacgtaat ataaatcgtc gcaccttcag cattttgttg tgccatatca
     5641 agtgcttgaa cctccgcatg cttgtcacct tttctcaagt gtgcaccaat accaacaatc
     5701 ctaccttctt taactacaac agcgccaacg ggtggattaa cacctgtttg accttgtacc
     5761 atatttgcaa gttgaatcgc ataatccata aattgactca aatgatcacc tctataaaca
     5821 aaaatcctca catcatgaat taagatgcaa ggagaaaaat ttatcgttaa ataagcctat
     5881 ttgtacacat ttttacaaat acgctacatt atctttgtcg ataattaaca ttctttctcc
     5941 catccagact ttaactgtcg gctctagaat ctcactagat cagccactaa tatgaaacat
     6001 attagcaggt cgcaggcttt atttactgcc ggttgggaat ttcaccctgc cccgaaagaa
     6061 ttatatatga aattgttata gattatttga gtacgtagta tgtcaactac atttaaaatg
     6121 atactatatg ttttctgaaa aaacaattaa tgacggtttt aatttaatat aatctgagta
     6181 ctataggcat ctcattgata tgattcttac taacagacat taaaagcaaa ccttcaattc
     6241 gtctctatag agcgttctct ttattatctt ctagttacaa attattgatt gtcactgtgc
     6301 tgttgttgct cattcgattc taaagcatca tataattgag atactgtatg cgcaacttgt
     6361 tctactatca ttttcacacc atttcgtagt ttattaacac cgtttgtcat ttgacctatt
     6421 gcaatcatat ttgttaatgt tccaaacctt ggactaataa cttgattggt ttcaggtatg
     6481 atttgtatgc ctcccattgg atgtgcttgt acaatttgtc tattttcaag atttttaatt
     6541 aattgatcat cttgatccaa ttcatttaaa tgactttttg cacctgtcgc gttaatgaca
     6601 acattatata tgtctactga ttcttggttt ttgtatgaaa aataatacaa cttgccatca
     6661 tgtttcacat cttctaaatc ttttttcaaa attaaagact tattttctat taattcaata
     6721 attagttcag cagttcttgg aggcattgga tttgaattta attgaatcat ctttgagtat
     6781 ttttgattaa attgatgttg gtcttcaata cttaagctat tccatatcca atttaaattc
     6841 tctttcaaat gttcaatcat actttggaaa atgcccattt ctgttggacg cgctaaatca
     6901 tacttcaaat ctgcaatatg atttcctgta cgtctatgta ctaatttttt aaaatcaatg
     6961 tcatattcag cacattcttt taaaaataaa gaaactaaag tatcaagcgg tgcattgccg
     7021 aaatgatgtt ttttaatgtc atttaatttg tctttagtta agtacttgaa tgtcacgtct
     7081 atcattgtac ctcttacact tggtaaatga gcagaacgac tcgtcatagt aattggtaat
     7141 ttcggatgat gagcagcaac ataacgaaca acatctaaac tggcaaggcc tgtaccaata
     7201 atcgcaatat cgtccagttc atttacttcg tctaacgtat tatatgttgg ataaggcgta
     7261 gcaatatatc cttttttacc ctttaagtta tatggatcat ggtaggcaaa tgtaccacat
     7321 gttaaaaata cataatcgta cgcttgccat gatttttctg aatttgtagt acatatgtaa
     7381 taagttaaat tcgtttcatc aatattagaa tttgtataaa tctcttgaac tttattgtaa
     7441 ttagttgata tatttggata tttttttgtg aacatagata aataagattt catataatgt
     7501 ccgaatacaa atctcggtaa atatgcaggt tcatcaaaat taaaatcagt ttgttgttta
     7561 taccacttcc aaaattcagt ctcatcatct aaatttaaac tcatcttttt cgaaggcata
     7621 ttaattagca gctcagaact atcattttga aatggtacgc cctgtcccat atttacttta
     7681 tcatcgtata aatctatatc taattgatta aatttcgggt gcttaactaa ctctctcaat
     7741 acacttacac cagcagttcc catgcctatt attgctacac gcatatatca tccatccttt
     7801 tgtaattcaa aatattatat ttaaactatt acctaaaatt atagcaattt ggtattttta
     7861 ataaaattta ttaaggcaag ctattatttc actttcacaa ccattaaacc atttaaaact
     7921 tttcatttaa tatcaaatct agtgtttgtg ttaaaatatt tataccgagg tgaattaaat
     7981 tgaaatttat agcaaagata ttaatctcat tagtaattct atttatgatt tttagtcgta
     8041 aaaacaaagc ttcttaatca atacccttga ttacaaaata aattcaacta aggttattgg
     8101 ccatacactc agaatatggc taatcacctt tttcaatgca aaacaaagag tatattttgc
     8161 aaaatcaata tctatattta tctttaatac ccttttaata ctaaaaccaa atttagatta
     8221 catagtcata tcgtataata taccagagaa acatagacat tcatctatat agatgatact
     8281 ctatttaacg tctaggaggt atgttatgac gtataaagaa ctagcaacat atttaaaagt
     8341 tttatcagat tcaagcagat tagaaatact agatttactt tcttgtggag agttatgcgc
     8401 ttgtgatttg ttagaacatt ttcaattctc tcaacctaca cttagctatc atatgaaagc
     8461 attagtaaaa accaacttag ttacgacacg aaaaatcgga aataaacatt tataccagct
     8521 taatcatgat ctttttgagt ccgtaattca taacttgtct aaggttcata cctctaacca
     8581 acgatgtatt tgtcataacc ttaagactgg tgaatgctaa tgatgacaac tttagcaata
     8641 ctcatttttc tagttacttt aatatttgta ttatggcaac ctaaaggcct agatattggc
     8701 attaccgcat taactggagc ctttattgct gttattactg gtgttgtaag tttttccgat
     8761 gttttcgaag taacaagtat tgtatggaat gctactttta cttttgtctc agtcattctt
     8821 atttcattaa tattagataa agttggatta ttcgaatggt cagctattca catgcttcat
     8881 gcttcaaaag gcaatggttt aaaaatgttc gtttatatca tattattagg tgccattgtt
     8941 gctgcatttt tcgcaaatga tggcgcagcg ttaatcttaa cgcctattgt attagcgatg
     9001 gttaaaaata ttggatttaa taagcgcgca atatttccat ttattattgc aagtggtttt
     9061 attgctgata caacgtcttt acctttaatt gtaagtaatc tagtgaatat tatatctgcc
     9121 gattattttc atgtaggatt cgttcgatat tttagtagaa tgtttatacc taatttattc
     9181 tcacttttag caagtattat agtattgtgg ttatatttta gaaaagctat acctaaaacg
     9241 tttgatgata ataatataaa acgtcctaaa gatgctatta atgatttaaa gctatttaaa
     9301 atttcatgga ttgtgctagt tatattactt ttcggctatc taatcagtga attcactaaa
     9361 attccggtat caattttcac tggaatcatt gcttttatat ttctaatgtt ggctcgtaaa
     9421 tcaaatgctg taaatattaa ggaagtcatt aagggcgcac cttggaatat agtattattt
     9481 tcaattggta tgtatatcgt cgtattcggc ttaagaaatg ctggcattac tttaatattg
     9541 gctaaaatat tagaatatat ttccaattac ggtctattta gcaccatttt gggaatgggc
     9601 ttcatttcag catttttatc atcaataatg aataatatgc ctacagtttt aatagatgcg
     9661 attgctattg gtcaatcaaa tgtccatggc atgttaaaag aaggcctaat ttatgcgaat
     9721 gttatcggtt ctgatttagg tccaaaaatt acaccgatag gctctttagc tacattactg
     9781 tggttacacg tcttaacaca aaaagatgtt aagatttctt ggggcacata ctttaaaact
     9841 ggtatcatca ttacaattcc agtactattt ataacccttt taggattgta tctaacactt
     9901 atcatatttt aattaattag gagattgtta tgactaaaaa aacaatttat tttatatata
     9961 caggcaactc atgtcgaagt caaatggctg aaggttgggc taaacaaatc ttagcggaag
    10021 attggaatgt atattctgct ggtatcgaaa cacacggtgt taatcccaaa gcgatagaag
    10081 ctatgaaaga agtaggcatt gatatatcaa atcatacatc agatttaatc gataataata
    10141 ttattaaaaa ttcaaattta gttgttacat tatgtagtga tgcagacgta aattgccctt
    10201 ctttaccaac aaatgttaaa aaggaacatt ggggatttga tgatcctgca ggcaaaccat
    10261 ggtcagagtt ccaacgtgtg agagatgaaa ttaaaatcgc aattgaaaat ttcaaatcat
    10321 gatgagagtg ggacagaaat gataaaaaac actaatgatt tattatgcag tggctcttta
    10381 tcattagcta taactaatgt gtacttaaaa ataggaatac atgagtaaaa ctcatgcata
    10441 agaaatacta atttctaaag aaaaaataat tctttatcga tgtcctccgc caacttgcat
    10501 tgcctgtaga aattggtgtt ccaatttctc tatgttgaga ccccgccaac ttgcacatta
    10561 ttgtatgctg actttttgtc agcttctatg ttggggcccc gcttgcattg gcggaattat
    10621 caatcaatat ctttatttaa tataaaaaga cactttctat caaaacaaga tagaaagtgt
    10681 ctttttagta tgtccgagtc aaaaaatcaa ctcgtagctt atcaaattac ttattcaaat
    10741 gtttactgtc atctttatac acaaagtatt tgaagtattt tccttcagtc ttcatgttct
    10801 tataaaagtc agcgataatt gttgcattac tttctgccca cttaatatct gtagcatatt
    10861 gatgttctcc tggatttttt ggattccatc tcatactata caatgtattt tgatctgtgc
    10921 ttgataagaa gtgcttatga atgaaatcag caccgcctga aatagctttt tcaggtgtat
    10981 cccaaccatg ctttttagca tattctgcac ctgttttaat tgggtcttta tcaagggctc
    11041 ctactccata gaaattgtag tattttttgc catcaatttc gactccatta gctaattcac
    11101 ttttaactgc gccggtttct aataatgcat gtgaaattaa ataaacttcg ttaacgtgct
    11161 tgtctttagc agcttttaag aaatcatccg tatgtttcaa taacattggt ctatcgacta
    11221 acatgcgttt aattctgttt ttatcaattc cttggtactt tgataaatct aaaaattgat
    11281 atttttgctt tttattatca ataaatgtac cgctatccat tgcactttta atttctgttg
    11341 cagatgcatc tctccatgca tcattctttt tatttgatac ctgttgactc gtataattat
    11401 ttatttgttt ctttgctgca tcgtttaatg taacatttaa cttttcaatc ttaatgtctg
    11461 atttaacatg tttgaaaaat atctgatcgg atatcattga gaaaaataaa aatgagacaa
    11521 cagcaaatat gacaacaagt cctattattc caaaaataga acctttcttg tgtttattca
    11581 tatccacacc tcttaggtca ttgttgttat acattcagtt tgactacgat aataaagttt
    11641 aacattatta aaaccgttta acaattttat ctatgcattg ttacatattc ataaataaac
    11701 agtaatgtaa atgaaacgtt ttaaacgatt tatcaacatt actttacgtt gatctacgaa
    11761 tcataaatgt tttatcttct tgtataacct ttgaaaacct ttatatcaat aatcttatta
    11821 ttcatgtatt aaaaaacaaa aaattctctt gttcgtttac ttagtttctt ttttataatc
    11881 catcataata aaacttgctg catttgatct atttttataa tagtactgat ttaaatcaat
    11941 cgtaccttca atttgaccat cacgatacat catttcatta gtgaagttat ttatcatcac
    12001 gaaatcagcg cgatctctaa taacatctaa atcgtcgttt cgtgcaaaaa aatgttctaa
    12061 atttaaatgt gcgtaatcca ttgttacctc ccgattacaa attttgttct atctactatt
    12121 tagcaaagta ataatacatc atatcacatt aaattaatta cttatgtctt atatttaaca
    12181 cttaatttag cgattacgca aatgtatgat ttttctaaat attttattct aactttatcc
    12241 ggaaatattt gttatacgta taacttggag aatgactact tgaaatttaa tgacgtatac
    12301 aacaaacacc acaaaatcat acaccatctt ttaaaaaaat ataatattag ctataattat
    12361 gatgagtatt atcaactact cttgataaaa atgtggcaat tgagtcagat atataaaccc
    12421 tcaagcaagc aatctttatc ctctttttta ttcactcgat taaattttta ccttatcgat
    12481 ttattcagac aacaaaatca attaaaagat gtcattttat gtgagaataa ttcaccaaca
    12541 ttaactgaac aaccaacata ctttaatgaa catgaccttc gtttacaaga tatcttcaag
    12601 tttttaaatc atagagaaag actatggctc aaactatacc ttgaaggata caagcaattt
    12661 gaaattgctg aaatcatgtc attatcgctt tcaacgatta aattaattaa gacgtccgtt
    12721 aagcgtaaat gccaacataa ttttaattag tttattgtga aatttcggtc gatgtgttaa
    12781 ggatgttgaa acactctatc atcttcatat aaatttattt taaccattaa attaacaact
    12841 tattatacaa ggagtactat atttgcaaga caattctact aaatatctac tttatatcca
    12901 aactgctact tcaaaccatc tcgaaacaaa ttgtgtcttt ttacattgcg attacattct
    12961 taaagttcca attaacaaac tcgtttcata ttatgcgaaa ttgcatttat catcacaaag
    13021 tgtgctaatt gagactgcaa aaaacatact aaatattaat aaactggttc ccatttacat
    13081 caatgcaaaa actatacttt ttccgttaaa acataaacgt gcaccgatac aaatttatat
    13141 caatgcacat tatattgttg gtatgactgc catagagaat tcaacattaa tacattttca
    13201 agaaggcatt cagctagaag ttgatgagcc attttctcta gtttcaaaaa aatgtcatga
    13261 aagtttagct ttgaagcact tcattgaaaa tactatttcg aattaaattt aatttctaaa
    13321 agtttcttag taaagtatga tgtcacaatt tttataaaat atatgctaac aatcattaat
    13381 aaaatcgctc caattattgt taaaataaca acagttgtag ataaatctac ctttggatta
    13441 acgaaaaatt gtacgccaga tagacttgta attagcccaa ataaaaacaa acctaataaa
    13501 gcaacataag caaacatcat cactactaat gtaacaaaca tactataact ttttgtttct
    13561 ttatttcgaa atacattttg tcttaagtaa gcattagcaa aggtaacagg cttatttaag
    13621 ttaacgctgt tatcatcaga tatagaagac aatcgttgat ctaatgcttg tttctccttc
    13681 ttgttcaaaa accataattg ctttttaact tttttatcaa atgatgcttt attcataatt
    13741 aaggatttct ctcctttata atattgacgt aattttaaac attagcgtca attgaaagtg
    13801 tattttatat attttacaga aatatatgta tcaaatctac aaaaatccat attacaattt
    13861 catttatggt gatttgacgc taaaatacag tctgctaatt ttttcaaact aatgcttttt
    13921 aggtaagtac aatgataaat tttaatcgtt taaatgtttc atatataatg aatctagcca
    13981 taatcatatt gccttcaaaa ttaatcttaa aaaatgaaaa gaaaggattt agcatgcaaa
    14041 aattcaaaga ctttttttac gatgatttat cggttacacg aggaaattat tttttaactt
    14101 taatggcagc attttttatt actatcattc tgtttatcgg cataggtgcc agtgaagtac
    14161 atttgcttta tggtatgctg attgtattag taggtttaat tctattgagg ctattcaaaa
    14221 tcaatttatt ctcttttaaa aaattaacat tgtctcaagt tatttatatt ataggcggtg
    14281 cactattaat ttatggatta gataatcttt atttatattt tcatgacgta ccggcaaatg
    14341 aacaacaatt agagcaagaa atacgaaata caccattcta tatttctatt ttcactgtta
    14401 ccatcatccc cgctattgtg gaagaaattg tttttcgcgg tatgataata agggttatct
    14461 tcagaaaaca cttgttttta gggttaattg tgtctagttt agtttttgca tcattacacg
    14521 aatctgacac ttggattggt tatttacctt acttatattc tggtttgatt tttggcctaa
    14581 tttatataaa aacaaaacga ttagaagttg taatattcat gcacttctta aataacttgt
    14641 tagctctgct ctttataata tggagataat actagttgat ataatacaca ataattttcc
    14701 ctcaacatgt tattcacaaa actatatgca atacaattta ataatataca agcttttaaa
    14761 acaataaaaa accttgtata attagcttaa ttttcataaa aattaaacat catactttat
    14821 tttaggagaa ttaatatgtt ttcgaggaat aacaatattt ttgttgatga tttgtctgta
    14881 acaaaggaca attatttaat tgcagtttta aaaatgttag tcattttttt agttattaat
    14941 tatggaacag acgtcagtta tgaccatgag tatattgggc tattcattat attactaggt
    15001 gttgtatttc ttaaagtttt aaatatcaat ttattatctt tcaaaaaatt aaaattcact
    15061 catatgcttt atattatatt tggatttttg ttgatgtatg gactagataa tttatatgat
    15121 atgtttgcac cacctacatt aaatgaaacg ttgatagatg aagagtttga agatgtacct
    15181 tatcacttgg ctctgattag tattgccatt attccaccta tcacggaaga aattatctgt
    15241 cgtggattga ttatacgagt tttatttaga aatcatcttt ttttaggact aattgtatca
    15301 agcatattct tcgcactaat acatgaatct gatacactga ttggttatct accgtatttt
    15361 tattcaggtt taatttttgg ctatacttac ttaaaaacaa aacgtttaga ggtaccgatt
    15421 ttaatacatt ttatcaataa cctcttagcc atttaacaat aaaatcatta attattttga
    15481 tatttacatg atgacaccaa agcttttaca aagtattaat aggtgccttt ccaaatgtta
    15541 ttgcatattt acattctgca attatataaa ggtaacaaag catattaagt ttagctatga
    15601 aaaaatctat gacgatagaa tttttcatag ctatttttta tagttattga gcctatccca
    15661 gaccctctac actgttatat tgccagtcat tgaccgaacg aaaatgccct tattataagc
    15721 tatttcaatt ctagtcgggg ccccaacaca tagaatttcg aaaagaaatt ctacaaacaa
    15781 tgagagttgg atgaggacct caacatagag aaattgaatc ccaaatttct acagacaatg
    15841 aaatacatat taattcaata ttgactcgaa catgaaaaac ccccataagc acaatgccta
    15901 tgagggttta aa
//
LOCUS       DALMNS010000068        15888 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.068, whole genome shotgun sequence.
ACCESSION   DALMNS010000068 DALMNS010000000
VERSION     DALMNS010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 15888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15888
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.068"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            35..13246
                     /locus_tag="O6Y56_001781"
                     /pseudo
     CDS             35..13246
                     /locus_tag="O6Y56_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109306.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GA module-containing protein"
     gene            13250..13675
                     /locus_tag="O6Y56_001782"
                     /pseudo
     CDS             13250..13675
                     /locus_tag="O6Y56_001782"
                     /inference="COORDINATES: protein motif:HMM:NF013622.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GA module-containing protein"
     gene            13697..>15888
                     /locus_tag="O6Y56_001783"
     CDS             13697..>15888
                     /locus_tag="O6Y56_001783"
                     /inference="COORDINATES: protein motif:HMM:NF013622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GA module-containing protein"
                     /protein_id="HDB5575035.1"
                     /translation="MPNLNHAQQQAFTDAINAAPTRTEVAQHVQTATELDHAMETLKN
                     KVDQVNTDKAQPNYTEASTDKKEAVDQALQAAESITDPTNGSNANKDAVEQALTKLQE
                     KVNELNGNERVAEAKTQAKQTIDQLTHLNAEQIANAKQNIDQTTKLQPIAELVDQATQ
                     LNQSMDQLQQAVNEHANVEQTVDYTQADSDKQNAYKQAIAEAENVLKQNANKQQVDQA
                     LQNILNAKQALNGDERVALAKTNGKHDIDQLNALNNAQQDGFKGRIDQSNDLNQIQQI
                     VDEAKALNRAMDQLSQEITGNEGRTKGSTNYVNADTQVKQVYDEAVDKAKQALDKSTG
                     QNLTAEQVIKLNDAVTAAKQALNGEERLNNRKSEALQRLDQLTHLNNAQRQLATQQIN
                     NAETLNKASRAINRATKLDNAMGAVQQYIDEQHLGVISSTNYINADDNLKANYDNAIA
                     NAAHELDKVQGNAIAKAEAEQLKQNIIDAQNALNGDQNLANAKDKANAFVNSLNGLNQ
                     QQQDLAHKAINNADTVSDVTDIVNNQIDLNDAMETLKHLVDNEIPNAEQTVNYQNADD
                     NAKTNFDDAKRLANTLLNSDNTNVNDINGAIQAVNDAIQNLNGDQRLQDAKDKAIQSI
                     NQALANKLKEIEASNATDQDKLIAKNKAEELANSIINNINKATSNQDVSQVQTAGNQA
                     IEQVHANEIPKAKIDANKDVDKQVQALIDEIDRNPNLTDKEKQALKDR"
BASE COUNT         6730 a         2900 c         2836 g         3422 t
ORIGIN      
        1 tttgaatgat aagtaatttt atgttaaaag tctcctaaat ggtaaccata atttagagca
       61 agctaaatca aatgcaaaca ctactataaa cggacttcaa catttaacaa ctgcacaaaa
      121 agataaattg aaacaacaag tgcaacaagc acaaaatgtt gcaggtgtaa atactgttaa
      181 atcaagtgcc aacacattaa atggtgctat gggtacgtta agaaatagca ttcaagataa
      241 tacagctacg aaaaatggcc aaaactatct tgatgctaca gaacgtaaca aaacaaacta
      301 taacaatgct gttgatagtg ctaatggtgt cattaatgca acaagcaatc caaatatgga
      361 tgctaatgca attaaccaaa tcgctacaca agtgacatca acgaaaaatg cattagatgg
      421 tacacataat ttaacgcaag cgaaacaaac agcaacaaat gccatcgatg gtgctactaa
      481 cttaaataaa gcgcaaaaag atgcgttaaa agcacaagtt acaagtgcgc aacgtgttgc
      541 aaatgtaaca agtatccaac aaactgcaaa tgaacttaat acagctatgg gtcaattaca
      601 acatggtatt gatgatgaaa atgcaacaaa acaaactcaa aaatatcgtg atgcagagca
      661 aagtaagaaa actgcttatg atcaagctgt agctgctgcg aaagcaattt taaataaaca
      721 aactggttca aattcagata aagcagcagt tgaccgtgca ttacaacaag taacaagtac
      781 gaaagatgca ttgaatggtg atgcgaaact agcagaagcg aaagcggcag ctaaacaaaa
      841 cttaggtact ttaaaccata ttacaaatgc acaacgtact gcgttagaag gtcaaatcaa
      901 tcaagcggcg actgttgatg gcgttaatac tgtaaaaaca aatgccaata cattagacgg
      961 cgcaatgaat agtttgcaag gttcaatcaa tgataaagat gcgacattaa gaaatcaaaa
     1021 ttatcttgat gcagatgaat caaaacgtaa cgcatatact caagctgtca cagcagctga
     1081 aggcatttta aataaacaaa ctggtggtaa cacatctaaa gcagacgttg ataatgcatt
     1141 aaatgcagtt acaagagcga aagcggcttt aaatggtgct gaaaacttaa gaaatacgaa
     1201 aacttcagca acaaatacaa ttaatgggtt accaaactta acacaattac aaaaagacaa
     1261 cttgaagcat caagttgaac aagcgcaaaa tgtagctggt gtaaatggtg ttaaagataa
     1321 aggtaatacg ttaaatactg ccatgggtgc attacgtaca agtatccaaa atgataatac
     1381 gacgaaaaca agtcaaaatt atcttgatgc atctgatagc aacaaaaata attacaatac
     1441 tgctgtaaat aatgcaaatg gtgttattaa tgcaacaagc aatccaaata tggatgctaa
     1501 tgcgattaat ggcatggcaa atcaagtcaa tacaacaaaa gcagcgttaa atggtgcaca
     1561 aaacttagct caagctaaaa caaatgcaac gaacacaatt aacaacgcac atgacttaaa
     1621 ccaaaaacaa aaagatgcat taaaaacaca agttaacaat gcacaacgtg tatctgatgc
     1681 aaataacgtt caacatacag ctactgaatt gaacggcgcg atgacagcac ttaaagcagc
     1741 tattgctgat aaagaaagaa caaaagcaag cagtaattat gtcaatgctg atcaagaaaa
     1801 acgtcaagcg tatgattcaa aagtgacgaa cgctgaaaat atcattaatg gtacaccgaa
     1861 tgcgacatta acagtcaatg acgtaaatag tgcgacttca caagtcaatg cggctaaaac
     1921 agcattaaat ggtgataaca acttacgtgt tgcaaaagaa aatgctaata atacaattga
     1981 tggattagca caattaaata atgcacaaaa agcaaaatta aaagaacaag ttcaaagtgc
     2041 aactacatta gatggtgttc aaactgttaa aaatagttct caaacgttga atacagtgat
     2101 gaaaggctta agagatagta ttgcgaatga agcaacaatt aaagcaggtc aaaactacac
     2161 tgacgcaagt ccaactaatc gtaacgagta cgacagtgca gttactgcag caaaagcaat
     2221 cattaatcaa acatcgaacc caacgatgga accaaatact attacgcaag caacatcaca
     2281 agtgacaact aaagaacatg cattaaatgg tgcgcaaaac ttagctcaag ctaagacaac
     2341 tgcgaaaaac aacttgaata acttaacatc aattaacaat gcacaaaaag atgcattaac
     2401 gcatagcata gatgttgcaa caacagtagc tggtgtaaat caagaaactg ccaaagcaac
     2461 agaattaaat aacgcaatgc atagtttaca aaatggtatc aatgatgaga cacaaacaaa
     2521 acaaactcag aaatacctag atgctgagcc aagtaagaaa tcagcttatg atcaagctgt
     2581 aaatgcagcg aaagcaattt taacaaaagc tagtggtcaa aatgtagaca aagcagcagt
     2641 tgaacaagca ttacaaaatg tgaacagtac gaagacggcg ttgaacggtg atgcgaaatt
     2701 aaatgaagct aaagccgctg cgaaacaaac gttaggtaca ttaacacaca ttaataatgc
     2761 acaacgtaca gcgttagata atgaaattac acaagcaaca aatgttgaag gtgttaatac
     2821 agttaaagcc aaagcgcaac aattagatgg tgctatgggt caattagaaa catcaattcg
     2881 tgataaagac acgacgttac aaagtcaaaa ttatcaagat gctgatgatg ctaaacgaac
     2941 tgcttattct caagcagtaa atgcagcagc aactatttta aataaaacag ctggcggtaa
     3001 tacacctaaa gcagatgttg aaagagcaat gcaagctgtt atacaagcaa atactgcact
     3061 aaacggtatt caaaacttag aacgtgcgaa acaggctgcg aacacagcta ttacaaatgc
     3121 ttcggactta aatacaaaac aaaaagaagc attaaaagca caagtaacaa gtgcaggacg
     3181 cgtatctgca gcaaatggtg ttgaacatac tgcgactgaa ttaaatactg cgatgacagc
     3241 tttaaaacgt gccattgctg ataaagctga cacaaaagct agtggtaact atgtcaatgc
     3301 tgatgcgaat aaacgccaag catatgatga aaaagtgaca gctgcagaaa atatcgttag
     3361 tgatacacca acaccaacgt taacaccatc tgatgttaca aatgcagaaa cgcaagtaac
     3421 gaatgctaag acgcagttaa acggtaatca taatttagaa gtagcgaaac aaaatgctaa
     3481 cacagcaatt gatggtttga cttctttaaa tggtccgcaa aaagcaaaac ttaaagaaca
     3541 agtgggtcaa gcgacgacgt tgccaaatgt tcaaactgtt cgtgataatg cacaaacatt
     3601 aaacactgca atgaaaggtc tacgagatag cattgcgaat gaagcaacga ttaaagcagg
     3661 tcaaaactac acagatgcaa gtcaaaacaa acaaactgac tacaacagtg cagtcactgc
     3721 agcaaaagca atcattggtc aaacaactag tccaacaatg aatgcgcaag aaatcaatca
     3781 agcgaaagac caagtgacag ctaaacaaca agcgttaaat ggtcaagaaa acttaagaac
     3841 tgcgcaaaca aatgcgaagc aacatttgaa tggcttaagt gacttaactg atgctcaaaa
     3901 agatgcagta aaacgccaaa tcgagggtgc aacgcatgtt aatgaagtaa cacaagcaca
     3961 aaataatgcg gatgcattaa atacagctat gacgaacttg aaaaatggta ttcaagatca
     4021 aaatacgatt aagcaaggtg ttaacttcac tgatgcagat gaagcgaaac gtaatgcata
     4081 tacaaatgca gtgacgcaag ctgaacaaat tttaaataaa gcacaaggtc caaatactgc
     4141 aaaagacggt gtcgaaactg cattacaaaa tgtacaacgt gctaaaaacg aattgaacgg
     4201 taatcaaaat gttgcgaatg ctaagacaac tgcgaaaaat gcattgaata acctaacatc
     4261 aatcaacaac gcgcaaaaag aagcattgaa atcacaaatt gaaggtgcga caacagttgc
     4321 aggtgtaaat caagtatcta caacggcatc tgaattaaat actgcaatga gcaacttaca
     4381 aaatggtatt aatgatgaag cagctacaaa agcagctcag aaatatactg atgcagatag
     4441 agataaacaa actgcataca atgatgctgt aacagcagct aaaacgttat tagataaaac
     4501 agctggcaca aatgacaata aagcagccgt tgaacaagca ttacaacgtg tgaatactgc
     4561 taaaacagca ttaaatggtg acgcgcgatt aaatgaagcg aagaacacag ctaaacaaca
     4621 attagcgaca atgtcacatt taactgatgc tcaaaaagca aacttaacag aacaaattga
     4681 acgcggtacg actgttgctg gtgttcaagg tattcaaact aatgccggta ctttagatca
     4741 agcaatgaat caattaagac aaagtattgc ttctaaagat gcgactaaat caagcgaaga
     4801 ttatcaagac gcgaatgcag atttacaaac tgcatacaac cgtgcagtat ctgatgctga
     4861 gggtattatt agtgcaacga ataaccctga aatgaatcca gatacgatta atcaaaaagc
     4921 gagccaagtg aacagtgcga agtctgcatt gaacggtgat gaaaaattag cagctgcaaa
     4981 acaaactgcg aaaacagata tcggtcgttt aacagacttg aataatgccc aacgaactgc
     5041 ggcaaatgct gaagtggatc aagcaccaaa tcttgcagct gtaacagcgg ctaaaaataa
     5101 agcaacatcg ttaaacacag tgatgggtaa tttgaaacat gcacttgctg aaaaggataa
     5161 tacgaaacgt agtgttaatt acacagatgc ggatcgacca aaacaacaag cgtatgatac
     5221 tgcggttaca caagcagaag caattactaa tgctaatggc agcaacgcga acgaaacaca
     5281 agttcaagca gcacttaacc aattgaatca agctaaaaat gacttgaatg gtgataataa
     5341 agttgctcaa gcgaaagaat cagcgaaacg tgcattagct tcatatagta acttgaataa
     5401 tgcgcaatca actgcagcaa ctagtcaaat tgacaatgca acgacagtag caggcgtaac
     5461 ggctgcacaa aatactgcta atgagttaaa tacagcaatg ggtcaacttc aaaatggtat
     5521 taatgaccaa aacactgtta aacaacaagt gaactttaca gatgctgacc aaggtaagaa
     5581 agatgcttac acaaatgctg ttacgaatgc tcaaggtatt ttagataaag caaacggtca
     5641 aaatatgaca aaagcacaag ttgaagctgc attaaatcaa gtaacgactg ctaagaatgc
     5701 tttgaatggt gacgcaaatg taagacaagc aaaatcagat gcgaaagcaa acttaggtac
     5761 attaacacac ttaaataatg cacaaaaaca agatttaaca tcacaaatcg aaggcgcaac
     5821 aacaatcaac ggtgtaaatg gtgttaaaac gaaagcacaa gacttagatg gtgcaatgca
     5881 acgattagag tcagcaatcg caaataaaga tcaaactaaa gcgagcgaaa actacatcga
     5941 cgcagatcca actaagaaaa cagcatttga taatgccatc acacaagctg aatcttactt
     6001 aaataaagat catggtgcga ataaagataa gcaagctgtt gaacaagcaa ttcaaagtgt
     6061 aacgtctact gaaaatgctt tgaacggtga cgcaaactta caacgcgcta aaactgaagc
     6121 tacacaagct atcgataact tgacacattt gaatacacca caaaaaacag cattaaaaca
     6181 acaagtgaac gctgcgcaac gtgtatcagg tgtaactgat ctgaaaaata gtgctacatc
     6241 acttaataat gcgatggatc aattaaaaca agcaattgct gatcatgaca caattgtagc
     6301 tggtggtaat tacactaacg caagtcctga taagcaaggt gcttacactg atgcatataa
     6361 tgctgcgaaa aacattgtaa atggttcacc taatgtgatt acaaatgcag cagatgttac
     6421 agcagcaaca caacgtgtca ataatgctga aacaggttta aacggtgata caaacttagc
     6481 aactgcgaag caacaagcta aagaagcatt acgtcaaatg acgcatttat ctgatgcaca
     6541 aaaacaaagt attactggac aaattgataa tgcgactcta gtaactggtg tacaaagtgt
     6601 gaaagataat gcaacaaatc ttgacaatgc aatgaatcaa cttcgaaata gtattgcgaa
     6661 taaagatgaa gttaaagcaa gtcaaccata tgttgatgca gatacggata aacaaaatgc
     6721 atacaacaca gctgttacaa gtgctgaaaa tatcattaat gcaacgagtc agccgacact
     6781 tgatccatct gcagtaacac aagcagctaa tcaagtgaac actaacaaaa cagcgcttaa
     6841 tggtgcacaa aacttagcaa ataaaaagca agaaacaact gctaacatca accaattaag
     6901 tcatttaaat aatgctcaaa agcaagattt aaatacgcaa gtgacaaatg caccaaatat
     6961 tagcacagta aatcaagtga aaactaaagc tgaacaatta gatcaagcaa tggaacgttt
     7021 agtcaacgga atccaagaca aagatcaagt gaaacaaagt gttaacttta cagatgcaga
     7081 tccagaaaaa caaacagcat acaacaatgc ggtaactgct gctgaaaata ttattaatca
     7141 agcaaatggt acaaatgcga accaatcaca agttgaagca gcactttcaa ctgtaacaac
     7201 tacgaaacaa gcgttgaatg gtgatagaaa agtaacagat gctaaaaaca atgcaaacca
     7261 aacattatct acgttagata acttaaacaa tgcacaaaaa ggtgctgtta ctggaaacat
     7321 caatcaagcg cacactgtag ctgaagtaac gcaagccatt caaacagctc aggaactaaa
     7381 tacagcgatg ggtaacttga aagatagctt gaatgataaa gacactacac ttggcagtca
     7441 aaactttgca gatgctgatc cagagaagaa aaatgcgtac aatgaagcgg ttcataatgc
     7501 tgaaaatatt ttaaataaat ctacaggtac aaacgtgact aaagatcaag ttgaagcagc
     7561 tatgaatcaa gtgaatacta caaaagcagc gcttaatggt actcaaaacc ttgaaaaagc
     7621 taaacaacac gcaaatacag caattgacgg tttaagccat ttaacaaatg cacaaaaaga
     7681 tgcattaaaa caattggtac aacaatcgac tactgttgca gaagcacaag gtaatgaaca
     7741 aaaagcaaac aatgttgatg cagcaatgga caaattacgt caaagtattg cagataatgc
     7801 gacaacaaaa caaaaccaaa attatactga tgcaagtccg aataaaaagg atgcttacaa
     7861 taatgctgtc acaactgcac aaggtattat taatcaaacg acaagtccaa ctttagatcc
     7921 gaatgttatc aatcaagctg ctggacaagt aagcacaact aaaaatgcat taaatggtaa
     7981 tgaaaaccta gaggcagcga aacaacaagc gacacaatca ttaggttcat tagacaactt
     8041 aaataatgcg caaaaacaag ctgttactaa tcaaattaat ggcgcgcata ctgttgatga
     8101 agcaaatcaa attaaacaaa atgcgcaaaa cttaaataca gcgatgggta acttgaaaca
     8161 agcgatagct gacaaagatg ctacgaaagc aacagttaac ttcactgatg cagatcaagc
     8221 aaaacaacaa gcatataaca ctgctgttac aaatgctgaa aacatcattt caaaagctaa
     8281 tggtggcaat gcaacacaat cagaagttga acaagcaatc caacaagtta atgcaacaaa
     8341 acaagcatta aatggtaatg ccaacgttca acatgcaaaa gacgaagcaa ctgctttaat
     8401 taatagctct aacgatctta atcaagcaca aaaagatgca ttaaaacaac aagttcaaaa
     8461 tgcaacaact gttgctggtg taaacgatgt taaacaaacg gcgcaagagt taaataatgc
     8521 aatgacacaa ttaaaacaag gcattgcaga taaagagaaa actaaagcag atggtaactt
     8581 tgtcaatgca gatcctgaca aacaaaatgc atataatcaa gcagtagcaa aagctgaagc
     8641 attaattagt ggtacgcctg atgtagtcgt tacacctagc gaaattactg cagcgttaaa
     8701 taaagttacg caagctaaaa atgatttgaa tggtaatacg atcttagcaa cggcgaaaca
     8761 aaatgttcaa caagctattg atcaattgcc aaacttgaat caagcgcaac gtgatgaata
     8821 caacaaacaa attacgcaag caacacttgt accaaacgtc aatgctattc aacaagcggc
     8881 aacaacgctt aatgacgcaa tgacacaatt gaaacaaggt attgcgaata aagcacaaat
     8941 taaaggtagc gagaactatc acgatgctga tactgacaag caaacagcat atgataatgc
     9001 agtagcaaaa gcagaagaat tgttgaaaca aacaacaaat ccaacaatgg atccaaatac
     9061 aattcaacaa gcattaacta aagtgaatga tacaaatcaa gcacttaacg gtaatcaaaa
     9121 attagctgat gccaaacaag ctgctaagac aaatcttggt acattagatc atttaaatga
     9181 tgcgcaaaaa caagcgttaa caactcaagt tgaacaagca ccagatattg caacagttaa
     9241 taacgttaaa caaaatgctc aaaatctgaa taatgctatg actaacttaa acaatgcatt
     9301 acacgataaa actgagacat taaatagcat taactttact gatgcagatc aagctaagaa
     9361 agatgcttat actaatgcgg tttcacatgc agaaggtatt ttatctaaag caaatggcag
     9421 caatgcgagt caaactgaag tcgaacaagc gatgcaacgc gtgagcgaag cgaaacaagc
     9481 attgaatggt aatgacaatg tacaacgtgc aaaagatgca gcgaaacaag taattacaaa
     9541 tgcaaatgat ttaaatcaag cacaaaaaga tgcactaaaa caacaagtcg atgctgcgca
     9601 aactgttgca aatgtaaaca caattaagca aacagcacaa gatttaaatc aagcaatgac
     9661 acaattgaaa caaggtattg cagataaaga ccaaactaaa gcaaatagta actttgtcaa
     9721 tgctgatact gataagcaaa atgcatacaa caatgcggta gcacatgctg aacaaatcat
     9781 tagtggtaca ccaaatgcaa acgtggatcc acaacaagtg gcgcaagcgt tacaacaagt
     9841 gactcaagct aagggtgatt taaacggtaa ccataactta caagttgcta aagacaatgc
     9901 gaatacagcc attgatcagt taccaaactt aaatcaacca caaaaaacag cattaaaaga
     9961 ccaagtgtca catgcagaac ttgttacagg tgttaatgct attaagcaaa atgctgatgc
    10021 attaaataat gcaatgggta cgttgaaaca acaaattcaa gcaaacagtc aagtaccaca
    10081 atcagttgac tttacacaag cggatcaaga caaacaacaa gcatataaca atgcagctaa
    10141 ccaagcgcaa caaatcgcaa atggcacacc aacacctgta ttgacgcctg atacagtaac
    10201 acaagcagtt acaactatga atcaagcgaa agatgcatta aacggtgatg aaaaattagc
    10261 gcaagcgaaa caggatgctt tagcaaatct tgatacgtta cgcgatttaa atcaaccaca
    10321 acgtgatgcg ttacgtaatc aaatcaacca agcacaagcg ttagctacag ttgaacaaac
    10381 taaacaaaat gcacaaaatg tgaatacagc aatgggtaac ttgaaacaag gtattgcgaa
    10441 taaagatacc gtcaaagcaa gtgagaacta tcatgatgct gatgccgata agcaatcagc
    10501 atatacaaat gcagtgtctc aagctgaagg tattatcaat caaacgacaa atccaacgct
    10561 taacccagat gaaataacac gtgcattaac tcaagtcact gatgctaaaa atggcttaaa
    10621 cggtgaagct aaattggcaa ctgaaaagca aaatgctaaa gatgctgtca atgcaatgac
    10681 gcatttaaac gatgctcaaa aacaagcatt aaaaggtcaa atcgatcaat cgcctgaaat
    10741 tgcgacagtg aaccaagtta aacaaacagc aacgagccta gaccaagcaa tgaatcaatt
    10801 atcacaagct attaatgata agactcaaac attagcggat ggtaattact taaatgcaga
    10861 tcctgacaaa caaaatgcgt ataaacaggc agtagcaaaa gctgaagcat tattgaataa
    10921 acaaaatggt actaatgaag tacaagccca agttgaaagc atcactaatg aagtgaacac
    10981 agcgaaacaa gcattaaatg gtaatgataa tttagcgaat gctaagcaac aagcgaaaca
    11041 acaactggcg aatttaacac acttaaatga tgcacaaaaa caatcatttg aaagtcaaat
    11101 tacacaagcg ccacttgtta cagatgtcac tacaattaat caaaaagcgc aaacattaga
    11161 tcatgcgatg gaattattaa gaaatagtat tgcggataat caagcgacat tagcgtctga
    11221 agattatcat gatgcaactg cgcaaagaca aaatgactat aaccaagcag taacagctgc
    11281 aaataatatc attaaccaaa caacatcacc tacgatgaat ccagatgatg ttaataacgc
    11341 aacaaatcaa gtgaataaca cgaaagttgc attagatggt gatgaaaacc ttgtagcagc
    11401 taagcaacaa gcgaacaata gacttgatca attagatcat ttaaataatg tgcaaaagca
    11461 acagttacaa tcacaaatta cgcaatcatc tgatattgct gcagttaatg gtcacaaaca
    11521 aacagcagaa tctttaaata ccgcaatggg taacttaatt aatgcgattg cagatcatca
    11581 agccgttgaa caacgtggta acttcatcaa tgctgatact gataaacaaa ctgcttatac
    11641 tacagcggta aatgaagcag aagccatgat taacaaacaa actggtcaaa atgcgaacca
    11701 aacagaagta gaacaagcta ttactaaagt tcaaacaaca cttcaagcgt taaatggcga
    11761 tcataattta caagttgcta aaacaaatgc gacgcaagca attgatgctt taacaagctt
    11821 aaatgatcct caaaaaacag cattaaaaga ccaagttact gctgcaactt tagtaactgc
    11881 agttcatcaa attgaacaaa atgcgaatac gcttaaccaa gcaatgcatg gcttaagaga
    11941 aagtattcaa gataacgcag caactaaagc aaatagcaaa tatatcaacg aagatcaacc
    12001 agagcaacaa aactacgatc aagcagtgca agctgcaaat agcattatca atgagcaaac
    12061 agcgacatta gataataatg cgattaatca agcagcgaca actgtgaata caacgaaagc
    12121 agcattacat ggtgatgtga agttacaaaa tgataaagat catgctaaac aaacggttag
    12181 tcaattagca catctaaaca atgcacaaaa acatatggaa gatacgttaa ttgatagtga
    12241 aacaactaga acagcagtta agcaagattt gactgaagca caagcattag atcaacttat
    12301 gaatacatta caacaaagta ttgctgacaa agatgcaaca cgtgcgagca gtgcatatgt
    12361 caatgcagaa ccgaataaaa aacaagcata tgatgaagca gttcaaaatg ctgagtctat
    12421 cattgcagga ttaaataatc cgactatcaa taaaggaaat gtatcaagtg cgacacaagc
    12481 agtgacaaca tctaaaaatg gtttagatgg tgttgaacga ttagctcaag ataagcaaac
    12541 agctggaaat tctctgaatc atttagatca attaacacca gctcaacaac aagcgttaga
    12601 aaatcaaatt aataatgcaa caactcgtga taaagtgact gaaatcattg cacaagcgca
    12661 agcattaaat gaagcgatga aagcattaaa agaaagtatt aaagatcaac cacaaactga
    12721 agcaagtagt aaatttatta acgaggatca agcgcaaaaa gatgcttata cgcaagcagt
    12781 acaacacgcg aaagatttga ttaacaaaac aactgatcct acattagtta aatcagtaat
    12841 tgatcaagca acacaagcag tgaatgacgc taaaaacaac ttacatggtg atcaaaaatt
    12901 agctcaagat aagcaacgtg caacagaaac gttaaataac ttgtctaact tgaatacacc
    12961 acaacgtcaa gcacttgaaa accaaatcaa taatgcagca actcgtggcg aagtagcaca
    13021 aaaattaact gaggcacaag cacttaacca agcaatggaa gcattacgta atagcattca
    13081 agatcaacag caaacagaag cgggtagcaa gtttatcaat gaagataagc cacaaaaaga
    13141 tgcataccaa gcagcagtac aacatgcaaa agatttaatt aatcaaacta gcaatccaac
    13201 gcttgataaa gcacaagttg aacaattgac acaaggtgtt aactaagcta aagataacct
    13261 acatggtgat caaaaacttg cagacgataa acaacatgca gttactgatt taaatcaatt
    13321 aaatggttta aataatccgc aacgtcaagc tcttgaaagt caaataaaca acgcagcaac
    13381 tcgtgatgaa gtagcgcaaa aattagctga agcaaaagcg cttgatcaag caatgcaagc
    13441 attacgtaat agtattcaag atcaacaaca aacagaagcg ggtagcaagt ttatcaatga
    13501 agataaacca caaaaggatg cttatcaaac agcggttcag catgcaaaag atttaattaa
    13561 ccaaacaggt aatccaacac ttgataaatc acaagttgaa caattgacac aagcagtaac
    13621 aactgcaaaa gataacctac atggtgatca aaaacttgct cgtgatcaac aataagcagt
    13681 aacaactgta aatacattgc caaacttaaa tcatgcacaa caacaagcat ttactgatgc
    13741 tataaatgca gcgcctacaa gaacagaggt tgcacaacat gttcaaactg ctactgaact
    13801 tgatcacgcg atggaaacat tgaaaaataa agttgatcaa gtgaatacag ataaggctca
    13861 accaaattac actgaagcgt caactgataa aaaagaagca gtagatcaag cattacaagc
    13921 tgcagaaagc attacagatc caactaatgg ttcaaatgcg aataaagacg ctgtagaaca
    13981 agcattaact aagcttcaag aaaaagtaaa tgagttaaat ggtaatgaga gagtcgctga
    14041 agctaaaaca caagcgaaac aaactattga ccaattaaca catttaaatg ctgaacaaat
    14101 tgcaaatgct aaacaaaata ttgatcaaac gacgaaactt caaccaattg ctgaattagt
    14161 agatcaagca acgcaattga atcaatctat ggatcaatta cagcaagcag ttaatgaaca
    14221 tgctaacgtt gagcaaactg tagattacac gcaagcagat tcagataagc aaaatgctta
    14281 taaacaagct attgcagaag ctgaaaatgt attaaaacaa aatgcgaata agcaacaagt
    14341 ggatcaagca cttcaaaaca ttttaaatgc aaaacaagca ttaaatggtg atgaacgtgt
    14401 agcacttgct aaaacaaatg gtaaacatga catcgaccaa ttgaatgcat taaacaatgc
    14461 tcaacaagac ggatttaaag gtcgcatcga tcaatccaac gatttaaatc aaatccaaca
    14521 aattgtagat gaggctaagg cacttaatcg tgcaatggat caattgtcac aagaaatcac
    14581 tggcaatgaa ggacgcacga aaggtagcac gaactatgtc aatgcagata cacaagtcaa
    14641 acaagtatat gatgaagcgg ttgataaagc gaaacaagca cttgataaat cgacaggtca
    14701 aaacttaact gcagaacaag ttatcaaatt aaatgatgca gtcactgcag ctaagcaagc
    14761 attaaatggt gaagaaagac ttaataatcg taagtctgaa gcattacaaa gattagatca
    14821 attaacacat ctaaacaatg ctcaaagaca attggcaacc caacaaatta ataatgctga
    14881 aacgctaaat aaagcatctc gagcaattaa tagagcaact aaattagata atgcaatggg
    14941 tgcagtacaa caatatattg acgaacagca ccttggtgtt atcagcagca caaattacat
    15001 caatgcagat gataatttga aagcaaatta tgataatgca attgcgaatg cagcacatga
    15061 gttagataaa gtgcaaggta atgcaattgc aaaagctgaa gcagagcaat tgaaacaaaa
    15121 tattatcgat gctcaaaatg cattaaatgg agaccaaaac cttgcaaatg ccaaagataa
    15181 agcaaatgcg tttgttaatt cgttaaatgg attaaatcaa cagcaacaag atcttgcaca
    15241 taaagcaatt aacaatgccg atactgtatc agatgtaaca gatattgtta ataatcaaat
    15301 tgacttaaat gatgcaatgg aaacattgaa acatttagtt gacaatgaaa ttccaaatgc
    15361 agagcaaact gtcaattacc aaaacgctga cgataatgct aaaacaaact tcgatgatgc
    15421 taaacgtcta gcaaatacat tgctaaatag tgataacaca aatgtgaacg atatcaatgg
    15481 tgcaattcaa gcagtcaatg atgcaatcca aaatcttaat ggtgatcaac gattacaaga
    15541 tgctaaagac aaggcaattc aatcgattaa tcaagcatta gctaataaac taaaagaaat
    15601 cgaagcttca aacgcgacgg atcaagacaa gcttattgcg aaaaataaag cagaagaatt
    15661 ggcaaacagc atcattaata acattaataa agcaacaagt aatcaggatg tatctcaagt
    15721 tcaaacagct ggcaaccaag cgattgaaca agtgcacgcc aatgaaatac cgaaagctaa
    15781 aattgatgca aataaagatg ttgataaaca agttcaagca ttaattgatg aaattgatcg
    15841 aaatccaaat ctaacagata aggaaaaaca agcacttaaa gatcgtat
//
LOCUS       DALMNS010000069        15826 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.069, whole genome shotgun sequence.
ACCESSION   DALMNS010000069 DALMNS010000000
VERSION     DALMNS010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 15826)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15826)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15826
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.069"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..588)
                     /locus_tag="O6Y56_001784"
     CDS             complement(<1..588)
                     /locus_tag="O6Y56_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDB5575036.1"
                     /translation="MAKQKLVMIGNGMAGIRTIEEILERANDLYDITVIGKEPYPNYN
                     RIMLSNILQNKMTVEETIMNPYEWYEEHGIELITNDPVIEVDRANQSVITANGIEVSY
                     DKLIFATGSKAFVIPVPGSTLPSVIGWRTIDDTEQMMNIAKTKKKAIVIGGGLLGLEC
                     ARGLLDQGMEVTVLHLAEWLMEMQLDRKAGNMLKAD"
     gene            complement(616..1383)
                     /locus_tag="O6Y56_001785"
     CDS             complement(616..1383)
                     /locus_tag="O6Y56_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001014070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sirohydrochlorin chelatase"
                     /protein_id="HDB5575037.1"
                     /translation="MNGNIIVAHGMRHGRQNQALEAFISELVKDDIHHYDIAFLESEH
                     QDLETVMTTLVQSGVDHFKIVPLLIFSAMHYLKDIPNIVHEMKRRYPDIKVEVSEPLG
                     THPLMRRLIEQRICDALAGDKQQVGIMVVAHGNINGKFTKAHEELQICARNLQISKPT
                     YARTLYGEISFTHDLEIISKRYQKLIVVPLFLYDGRLVNKVKQQMNDMVINTDIHITP
                     SINFDPILKQIINDRLESLNDSNENIKAQTKIKTFLK"
     gene            complement(1612..2148)
                     /locus_tag="O6Y56_001786"
     CDS             complement(1612..2148)
                     /locus_tag="O6Y56_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5575038.1"
                     /translation="MTNTTIRLANENDAETLQQLMYKAFTPLRELGIDWPSVNANLDA
                     VKENIDKNTTFVMTIDDEIISTITVRYPWGSVKSISGYPFVWWFATNPEYEGKGYGSQ
                     LLTYVEEAFLRDTLKSAAVTLGTSARLHPWLLKIYEKRGYEIYSEHENDDGDLGVIMR
                     KVLIPERFDETILGQPPF"
     gene            complement(2561..3385)
                     /locus_tag="O6Y56_001787"
     CDS             complement(2561..3385)
                     /locus_tag="O6Y56_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HDB5575039.1"
                     /translation="MIKNNKTVEDTYSTKAIVDSISSSVQMKQVMVQQTPGRYMLKSM
                     MAGFLLSIVTVFMFGIKTQFASTHVDGLINLMGAIAFSLGLVLVVLTNSELLTSNFMY
                     FTVGWYYKVVSINKMMWILLYCFLGNILGGFVLFFLMKYAHVMTPEMTQALTALVQKK
                     TVDSTWLNIFTKGIFCNFFINIGIFISMQFKGGLTKAFFIACGVIVFVYMGYEHVVFN
                     AGLYAGMVFFNLDAVSWLHVLKNIVFAFLGNFVGGGIFVGLVYAFLNGKRNRLEQQ"
     gene            complement(3589..3771)
                     /locus_tag="O6Y56_001788"
     CDS             complement(3589..3771)
                     /locus_tag="O6Y56_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575040.1"
                     /translation="MAQRYIKVLILYIFTTLLSSITVTSKCVPNKVVRFILRTVVGYG
                     IFAYGLHYFSNLKKNK"
     gene            complement(3858..4325)
                     /locus_tag="O6Y56_001789"
     CDS             complement(3858..4325)
                     /locus_tag="O6Y56_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HDB5575041.1"
                     /translation="MTIKVEDNKIIFSRTIEAPIEKVFDAYTTKALFEKWFHPKDAST
                     KVFRFNAVSGGDAFYAIKTPTMISYTLAEYKTVKRPYLIEYIDSFATPQGAKDTKMPS
                     MKITLSFSKSNTRKTTVTSTSVFPTKEAAQQVINMGVEQGMNQTLDQLDALLK"
     gene            complement(4511..6058)
                     /gene="adcA"
                     /locus_tag="O6Y56_001790"
     CDS             complement(4511..6058)
                     /gene="adcA"
                     /locus_tag="O6Y56_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding
                     lipoprotein AdcA"
                     /protein_id="HDB5575042.1"
                     /translation="MKKKLGMLLLVPAVTLSLAACGNDDGKDKDGKVTIKTTVYPLQS
                     FAEQIGGKHVKVSSIYPAGTDLHSYEPTQKDILSASKSDLFMYTGDNLDPVAKKVAST
                     IKDKDKKLSLEDKLDKAKLLTDQHEHGEEHEHEGHDHEKEEHHHHGGYDPHVWLDPKI
                     NQTFAKEIKDELVKKDPKHKDDYEKNYKKLNDDLKKIDNDMKQVTKDKQGNAVFISHE
                     SIGYLADRYGFVQKGIQNMNAEDPSQKELTKIVKEIRDSNAKYILYEDNVANKVTETI
                     RKETDAKPLKFYNMESLNKEQQKKDNITYQSLMKSNIENIGKALDSGVKVKDDKAESK
                     HDKAISDGYFKDEQVKDRELSDYAGEWQSVYPYLKDGTLDEVMEHKAENDPKKSAKDL
                     KAYYDKGYKTDITNIDIKGNEITFTKDGKKHTGKYEYNGKKTLKYPKGNRGVRFMFKL
                     VDGNDKDLPKFIQFSDHNIAPKKAEHFHIFMGNDNDALLKEMDNWPTYYPSKLNKDQI
                     KEEMLVH"
     gene            complement(6352..6618)
                     /locus_tag="O6Y56_001791"
     CDS             complement(6352..6618)
                     /locus_tag="O6Y56_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Txe/YoeB family addiction module toxin"
                     /protein_id="HDB5575043.1"
                     /translation="MARLNITFSPQAFEDYKYFQQNDKKMVKKINELLKSIDRNGALK
                     GIGKPEKLKSNLTGYYSRRINHEHRLVYTVDDNHIKIASCKYHY"
     gene            complement(6618..6869)
                     /locus_tag="O6Y56_001792"
     CDS             complement(6618..6869)
                     /locus_tag="O6Y56_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HDB5575044.1"
                     /translation="MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESD
                     YNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKDIDV"
     gene            complement(7043..7134)
                     /locus_tag="O6Y56_001793"
                     /pseudo
     CDS             complement(7043..7134)
                     /locus_tag="O6Y56_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501155.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(7141..7740)
                     /locus_tag="O6Y56_001794"
     CDS             complement(7141..7740)
                     /locus_tag="O6Y56_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDB5575045.1"
                     /translation="MTKKLLTLFIVSMLILTACGKKESATTSSKNGKPLVVIYGDYKC
                     PYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLD
                     FQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDK
                     KIAKDNHIKTTPTAFINGEKVEDPYDYESYEKLLKDKIK"
     gene            complement(7759..8121)
                     /locus_tag="O6Y56_001795"
     CDS             complement(7759..8121)
                     /locus_tag="O6Y56_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000819849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4467 domain-containing protein"
                     /protein_id="HDB5575046.1"
                     /translation="MKRFVAMVLLLLVFISGCGNDKYVKEIDEAVKIQNQKQEQLAKK
                     GNGDRVDHFERKDANIYVYDKDKIIILAYKPLSNDDEVHYYAYDFSDKRVSYKQDFDS
                     RRYYQQHDADYHEENMTN"
     gene            8376..9626
                     /gene="fmhA"
                     /locus_tag="O6Y56_001796"
     CDS             8376..9626
                     /gene="fmhA"
                     /locus_tag="O6Y56_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FemA/FemB family glycyltransferase FmhA"
                     /protein_id="HDB5575047.1"
                     /translation="MNFVTLTSDEFNAFTTKHFSHYTQSAIHYNHRVDLKGDVHLVGV
                     KDDNGQVIAGCLLTEARTLKFFKYFYTHRGPVMDYTNQSLVAFFFKALTSYLKKQNCL
                     YVLVDPYLIENLRNADGEIVKSYDNRAFVRTMDTLGYKHQGFPVGYDSMSQIRWLSVL
                     DLKDKTEDQLLKEMDYQTRRNIKKTYDIGVKTKTLTIDETQTFFDLFHMAEEKHGFKF
                     RELPYFEEMQKLYDDHAMLKLAYIDLNEYLKTLQLKQQQLTAELSGVEEALEENPNSK
                     KNKTKRTQLEQQLNSNKRKIDNTIEQIEQDGAVLNLASALFIYNEHEVYYLSSGSNPK
                     YNAYMGAYHLQWEMIKFAKAHHIDRYNFYGITGDFSESSEDYGVQQFKKGFNAHVEEY
                     IGDFIKPIKPLLYKVQTYLNHKRR"
     gene            complement(9723..10454)
                     /locus_tag="O6Y56_001797"
     CDS             complement(9723..10454)
                     /locus_tag="O6Y56_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDB5575048.1"
                     /translation="MIQLNNIHKSFNDVEVIKGIDLSVEQGEVVTLIGRSGSGKTTLL
                     RMINALEIPTEGTVYVNGKTYTSKDKKSQIEVRKQSGMVFQSYNLFPHKTALENVMEG
                     LITVKKLKKDEARGKSLELLEKVGLTLVKDQRPHALSGGQQQRVAIARALAMNPKVML
                     FDEPTSALDPELVNDVLKVIKDLANEGMTMVIVTHEMRFAKEVSNNIVFIHEGMIGEQ
                     GAPEEMFNRPKTEELRRFLNVINEE"
     gene            complement(10451..11170)
                     /locus_tag="O6Y56_001798"
     CDS             complement(10451..11170)
                     /locus_tag="O6Y56_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDB5575049.1"
                     /translation="MFLNLNSEQQHALDAAKQAFGPMLEGLVKYSIPITLVTFVLGLI
                     IALFTALMRISTSKILRSISRVYVSIIRGTPMIVQLFIIFYGIPELGRLLTNDADNQW
                     TLAPVVAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYGQTIQRIILPQA
                     IRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYVLVALMYWVV
                     CFIISIIQGIYESYIERGYRS"
     gene            complement(11151..11930)
                     /locus_tag="O6Y56_001799"
     CDS             complement(11151..11930)
                     /locus_tag="O6Y56_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDB5575050.1"
                     /translation="MKRLLFVMIAFVFILAACGNNSSKDKEANKDSKTINVGTEGTYA
                     PFSFHDKDGKLTGYDIDVIKAVAKEEGLKLKFNETSWDSMFAGLDAGRFDVIANQVGI
                     NPDREKKYKFSKPYTFSSAVLVIRENEKDIKDFDDVKGKKLAQTFTSNYGKLAKDKGA
                     DITKVDGFNQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAF
                     SKKADDETVQKFNDGLKKIEENGELAKIGKKWFGQDVSKSK"
     gene            complement(12051..13490)
                     /gene="mdeA"
                     /locus_tag="O6Y56_001800"
     CDS             complement(12051..13490)
                     /gene="mdeA"
                     /locus_tag="O6Y56_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000038968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdeA"
                     /protein_id="HDB5575051.1"
                     /translation="MSKKQKLTMIITMLMGGFFGLLNETLLVTALPSIMKDFEISYTQ
                     VQWLTTAFLLTNGIVIPLSALVIQRYTTRQVFLVGISIFFLGTLLGGLSPHFATLLVA
                     RIIQALGAGIMMPLMMTTILDVFQPHERGKYMGIFGLVIGLAPAIGPTLSGYLVEYFN
                     WRSLFHVVAPIAAVTFLIGFKTIKNVGTTIKVPIDFISVIFSVLGFGGLLYGTSSISE
                     KGFDNPIVLVSMIGGIVLVALFVLRQYRLSTPLLNFAVFKNKQFTVGIIIMGVTMVSM
                     IGSETILPIFVQNLLHRSALDSGLTLLPGAIVMAFMSMTSGALYEKFGPRKLALVGMA
                     IVVITTAYFVVMDEQTSTIMLATVYAIRMVGIALGLIPVMTHTMNQLKPEMNAHGSSM
                     TNTVQQIAGSIGTAALITILAHASKNFSPTMSDYNGMNKIDMMNQIKVDTMLHGYHAG
                     FLFALLITVVSFFCSFMLQGKKKEVDSRQ"
     gene            13664..13768
                     /locus_tag="O6Y56_001801"
     CDS             13664..13768
                     /locus_tag="O6Y56_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative metal homeostasis protein"
                     /protein_id="HDB5575052.1"
                     /translation="MKLDLQTARRNLNSPNIKTRKRALKIIKQHKRAK"
     gene            complement(13922..14608)
                     /locus_tag="O6Y56_001802"
     CDS             complement(13922..14608)
                     /locus_tag="O6Y56_001802"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HDB5575053.1"
                     /translation="MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVR
                     ENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVYKSWRLNERHYGGLQGLNKDDAR
                     KEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVI
                     PFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELTD
                     DLEVIDKYYL"
     gene            complement(14934..15800)
                     /locus_tag="O6Y56_001803"
     CDS             complement(14934..15800)
                     /locus_tag="O6Y56_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDB5575054.1"
                     /translation="MSHNENLKLAQRGAYLSLIVYIILSIVKYVTGFVFNSAAVRADA
                     LNNMTDIIVSLAVIIGLKISIKPADRNHPYGHLKSENISSLLVSFVIMFVGIQVVIQN
                     APRLFKEDDVVPNAITIIVSLISGLIMLIVFAVNQSLAKRTKSSSLNSAAKDNLSDSL
                     VSIGTAIGLIFTQIGFPIVDIILATLLGLLIVYTGFGIFKEAIFMLSDGFNETELEAY
                     RNDILEVDEVQKVKSIKGRYHGSSVFIDVTIVVDANLSLVEAHQICDNVEHHLHKKGI
                     SSVYVHPEPDHL"
BASE COUNT         5155 a         2950 c         2167 g         5554 t
ORIGIN      
        1 atctgcttta agcatatttc cagctttacg gtctagctgc atttccatca accattcagc
       61 taaatgtaac accgttactt ccataccttg atctaataaa ccacgtgcac actctaaacc
      121 tagtaagcct ccaccaatta caattgcttt ctttttagtc ttagcaatgt tcatcatttg
      181 ttcagtatca tcaatcgttc tccaaccaat tacactcggt aatgtcgaac ctggaactgg
      241 aatgacgaat gctttagaac ctgtcgcaaa aatcaattta tcgtatgata cttcaatacc
      301 atttgcagta ataactgatt gatttgctct atctacttca atcacaggat catttgtaat
      361 taactcgata ccatgttcct cataccactc atatggattc ataattgttt cttcaactgt
      421 cattttattt tgtaaaatat ttgaaagcat gatgcggtta tagtttggat aaggttcttt
      481 accaattacc gtaatatcat ataaatcgtt agcgcgctct aatatttctt cgattgttcg
      541 aatgcccgcc ataccgttac caatcattac tagtttttgc tttgccataa aatatgcccc
      601 tttacttcat aatatttatt tcaaaaaggt tttaattttc gtttgtgctt ttatattttc
      661 attggagtca ttaagacttt ctaatctatc gttaataatt tgttttaaaa tcgggtcgaa
      721 gttaattgaa ggtgtgatgt gtatatctgt attaataacc atgtcattca tttgctgctt
      781 cactttgtta acaagtcttc cgtcatataa aaataaaggt acgacaatca atttttgata
      841 ccgtttcgag atgatttcta aatcatgtgt aaaactaatc tctccatata gcgttctcgc
      901 atatgtcggc ttgctaattt gcaaatttcg agcgcatatt tgtaactctt cgtgtgcctt
      961 agtaaacttt ccattaatat tgccgtgtgc aacaaccata attccaactt gttgtttgtc
     1021 acctgctaat gcatcacaaa tacgttgttc aattaatcgt ctcattaaag gatgtgtgcc
     1081 aagtggctcg cttacttcta cctttatgtc tggataccgt cgtttcattt catgaacgat
     1141 attcggtata tccttgagat aatgcattgc actaaagatt agcaatggta caattttaaa
     1201 atggtcaacc ccactttgaa ccaacgtcgt cattaccgtc tctaaatcct gatgttcact
     1261 ttctaaaaac gcaatatcat agtgatgtat atcatctttt actaattcag aaataaatgc
     1321 ttctaacgct tgattctgtc gtccgtgcct catgccatgt gcaacaatga tattcccatt
     1381 cacatttacc aaccctttca cacgtattgt ataccaaatc atttcgtttt tgtgaaaaga
     1441 atcacattat aatgtaaaat cagggaattc cctgatgcct gtagtcatgc atattcctta
     1501 tacattttcc ctttttgtta aatcaaaaaa gcgaccgata tatgaatccc tactcaacat
     1561 tcatttgagc aagcatcaat atatcggtcg cttgtagtgt atattattat cttaaaatgg
     1621 tggttggcct aatattgttt cgtcaaagcg ctcaggtatc aatactttgc gcatgatcac
     1681 acctaaatcg ccatcatcat tttcatgttc gctgtatatt tcataacctc ttttttcata
     1741 aattttaagt aaccacggat gtaatcttgc agatgtacct aaagtaactg ccgctgactt
     1801 caacgtatct cgcaaaaatg cttcttcaac ataagtaagt aattggctac catagccttt
     1861 cccttcatac tcaggatttg tcgcaaacca ccagacaaaa ggatagcccg aaatgctttt
     1921 cacacttccc caaggatatc taaccgtaat cgtagatata atttcatcat caattgtcat
     1981 gacaaatgta gtatttttat ctatattttc tttaacagca tctaaattag cattaaccga
     2041 aggccagtca attccaagtt ctcttaaagg tgtgaatgcc ttatacatta actgttgtaa
     2101 cgtttctgca tcgttttcat tcgccagtct aatcgtagtg tttgtcattt caatccccat
     2161 cactttcttt ttatttggaa tgcatcatag ttcattcaaa ctaaaaatcc ccttatagcg
     2221 taccaacatt tagcacatgt gtcagataac atgcctcatc taaataagat aggcatgcga
     2281 taaccggtta tttcattatt gactgcatca gtaaaaaagt ctaggacatg aattaatgat
     2341 atgtacgctt caaagctttc atttttcaat gtctactttg aagcgtgcag ttcataatgt
     2401 cctagactct acaatgttat attggcagta gctgactgcg ggccccaaca cagaagctga
     2461 cggcaggtca gcttacagta atgtgcaagt tggggaacgg gtcccaaaaa aggatgattc
     2521 taaattcatt gttgtcacaa catcttcaat tatgactcca ttactgttgc tctaatcgat
     2581 tgcgtttacc atttaaaaat gcataaacaa gtcccacaaa aataccgcca cctacaaagt
     2641 taccaaggaa tgcaaaaacg atatttttta atacatgtaa ccaagataca gcatcaaggt
     2701 tgaagaacac catacctgca tataatccag cattgaatac aacgtgctca tatcccatgt
     2761 atacaaagac tataacacca caagcaatga agaatgcttt tgtcaatccg cctttgaatt
     2821 gcatagaaat aaaaataccg atattaataa agaagttaca gaaaatacct tttgtaaaaa
     2881 tattcaacca agtcgaatcg actgtctttt tctgaactaa ggcagttaag gcttgtgtca
     2941 tttctggtgt cataacatgt gcatatttca ttaagaagaa taatacaaaa ccacctaaaa
     3001 tatttccaag gaaacaatat aataaaatcc acatcatctt attaatagaa acaactttat
     3061 aataccagcc aactgtaaaa tacataaaat tacttgttaa taattcagaa ttcgttagta
     3121 caactaagac caatcctaag ctgaaagcaa ttgctcccat taaattaatg agaccatcaa
     3181 catgtgtact tgcgaattgt gttttaatac caaacataaa aacagtaaca atggacaata
     3241 agaaacctgc catcatagat tttagcatgt atcgtcctgg tgtttgctgt accatcactt
     3301 gtttcatttg aacagatgat gatattgagt ctacgattgc tttagttgaa tacgtatctt
     3361 caactgtttt attatttttt atcacagcac ttcccccatt tactattatc aaataaattt
     3421 tacctatcaa ttatattagt atttaaatgt aattcataga ttaaaattca gaaaattctt
     3481 tttaccaatt caaaactaat atttactcat aaaaatagcg agatagatat cgcgacataa
     3541 aacaattggt atcattttaa ttgcgctcat ctcgctttat gtaaagtatt acttattctt
     3601 ttttaaattt gaaaagtaat gtaaaccata tgcaaatata ccgtagccta cgactgtacg
     3661 caaaataaat ctaacaactt tatttggtac acatttcgaa gtaacagtaa ttgaagataa
     3721 aagcgtagta aaaatatata atattaatac tttaatgtaa cgttgtgcca tcgaatcatc
     3781 cttcattcaa ttaataatat tacgttatta ttataaactg aatggcatat aaaatttttt
     3841 acatattttc aacaacttta tttcaataaa gcatcaagtt gatctaatgt ttgattcatc
     3901 ccttgctcaa cacccatgtt tatgacttgt tgagcggctt cttttgttgg aaatactgat
     3961 gttgatgtca ctgtcgtttt ccttgtattg ctcttggaaa atgacaaagt aattttcatg
     4021 cttggcattt ttgtatcttt tgcaccttga ggtgtcgcaa atgagtcaat atattcaatt
     4081 aaatatggac gcttaaccgt tttatattct gctaatgtat agctaatcat tgtaggtgtt
     4141 ttaatcgcgt aaaatgcatc accgcctgaa acagcattaa agcgaaacac tttggtacta
     4201 gcgtcttttg gatgaaacca tttttcaaat aatgcctttg tcgtataggc atcaaacacc
     4261 ttttcaatcg gtgcttctat cgttcttgaa aaaataattt tattatcttc aactttaatc
     4321 gtcatcttcc cactccctat cttttatatt tactcatctt aacatgcatt gagtgacata
     4381 tgttaccaaa tcatttgtta taaactatag taatattaat cattccctct gttgaaattg
     4441 ataactacga aataaaaaac acactctatt cagctattaa cagttgagta gagtgtgcaa
     4501 acctgttgaa ttaatgcact aacatttctt ctttgatttg gtctttattt aattttgaag
     4561 gataatatgt tggccagtta tccatttctt ttaataacgc gtcattatca ttacccataa
     4621 agatatggaa gtgttctgcc tttttaggtg caatgttgtg atcgctaaat tggatgaatt
     4681 tcggtaagtc tttatcatta ccatcgacca atttaaacat aaatctcacg ccacggttac
     4741 ctttaggata tttcaatgtc ttcttaccat tgtattcata tttaccagtg tgtttcttac
     4801 catctttagt aaatgtaatt tcatttcctt ttatatcaat gttagtaata tcagttttat
     4861 atcctttgtc ataataagct tttaaatctt tagcagattt cttcggatca ttttcagctt
     4921 tatgttccat cacttcatca agcgtaccgt cttttaaata agggtaaaca gattgccatt
     4981 caccagcata atcgcttaat tcacggtctt taacttgctc atctttaaaa tacccatcag
     5041 aaattgcttt gtcgtgttta ctttcagctt tgtcgtcttt cactttaaca ccactgtcta
     5101 aagctttacc gatattttca atattcgatt tcattaatga ttgatacgta atattatctt
     5161 ttttctgttg ttctttattt aaagactcca tgttgtagaa ttttaaaggc ttcgcatctg
     5221 tttctttacg aattgtttca gtcactttat tcgcaacatt atcttcgtaa agaatatatt
     5281 tagcattgct atctctaatt tctttaacaa ttttagttaa ttctttttgt gatggatctt
     5341 cagcattcat gttttgaata cctttttgaa caaaaccata acgatcagct aagtatccaa
     5401 ttgattcatg tgaaatgaat actgcattac cttgcttatc ttttgtaact tgcttcatat
     5461 cgttatcaat tttcttaaga tcgtcgttta attttttgta atttttctca tagtcatctt
     5521 tatgttttgg atcttttttc actaattcat ctttaatttc tttagcgaaa gtttggttaa
     5581 ttttaggatc taaccatacg tgtggatcat atccaccatg atgatgatgt tcttctttct
     5641 catgatcatg tccctcatgt tcatgctctt caccatgttc gtgttgatca gttaaaagct
     5701 ttgctttatc taatttatct tctaaagaca gttttttatc tttatctttg atagtagatg
     5761 caactttctt agcaaccgga tctaaattat cccctgtata cataaacaag tctgacttgc
     5821 ttgcgcttaa tatatctttt tgtgttggtt catagctatg taaatctgtc cctgctggat
     5881 agattgatga taccttcacg tgttttccac caatttgctc tgcaaatgat tgcaatggat
     5941 aaactgttgt tttaattgtt accttgccat ctttatcttt tccatcatca ttcccacatg
     6001 cggctaatga taaagttacg gctggtacaa gaagtaacat acctaatttc tttttcatag
     6061 tcaccctcct aaatagtaat ctttacgttt taaaattata tactcatgct acttaaaata
     6121 caagcactgt ttttataaat aatataaagt cgaatcatac tttaggtatt taccactttt
     6181 cgttttatct aatacatgac tattgtacaa atatgataca gaaaacttta tagtatttac
     6241 gaccgtcata atataagaaa aaagacaatc tctatcatat tgctaataga aattgccttt
     6301 tcatattgtc ctaaaataac ttaccctatt tttatagtgt gacttttagt tttaataatg
     6361 gtatttacat gatgctattt ttatatgatt gtcatctact gtatagacca atctatgttc
     6421 gtgattgata cgtctactat aataaccagt cagattcgat tttaactttt caggcttacc
     6481 tatacctttc aatgcaccat ttctgtcaat acttttaagt aactcattaa tcttcttcac
     6541 cattttttta tcgttctgct gaaaatactt ataatcttca aaggcttgag gcgaaaacgt
     6601 aatatttaac ctagccatta tacatctata tctttcgtta tagtttttcc acgttctaga
     6661 tctgcaattg attgagctaa gtgttcagca ttatttggat tctgttggag gtaaagtgtt
     6721 tccatcatgg agttataatc tgattctgac atgattacta cgtttttatc atcagtagag
     6781 gttacagtta ccatatcact atcatcattt acttttgtca taagtgcctt taaattctgt
     6841 cgagcgtatg aataattttt aataatcata tttatcgcct ccttttaaca cacctcaatt
     6901 gtacaaatat atgtacaata aaacaagaga cacaaaaaaa aactactaat caagattttg
     6961 aacggggaag aatcaatacc tatcctgtac tgattcccta ctaaacaatg tttacatgat
     7021 aatttccacc tatttagact tcctacatta aaaagacaac ctctatcata ttgctaatag
     7081 aaattgcctt tcatattgtc ctaataaatt ggtatcactt acttatctca acaattaaga
     7141 ctatttgatt ttatctttta ataacttctc ataactttca taatcatatg gatcttcaac
     7201 tttctcgcca ttaataaatg cagttggtgt cgtttttata tgattatctt tagcaatttt
     7261 tttatctttc tctgcagctt tccaagactt gctatctttt gtcttgtaat cttttataat
     7321 tttattttcc gtctctttat ctaaatgcag ttgtttaata tgtttatcta atagttcttt
     7381 tgttaaccat tctttatttt catcttgctg ggcagcaaat aattgctttt gaaaatctaa
     7441 aaatgattta ggtgcataca tcaatactgc atgactcgca cgcgaaccaa caattgagtc
     7501 tttacctaag aaagctaaat tgacaaattg gtattccact ttgtgattat ctatataatt
     7561 tttacgcaac tttggcataa ctttttcatc taattcttta caataaggac atttatagtc
     7621 gccatatatg acaactaatg gtttgccgtt tttcgaagat gtcgttgctg attctttttt
     7681 accgcaagct gttaaaatta acatgctcac tataaataat gttagtaatt ttttagtcat
     7741 aataactcct gttcatatct agttcgtcat attttcttca tgataatccg catcatgttg
     7801 ttgataatat cgtctcgaat caaaatcttg cttatatgat acacgtttat cactaaaatc
     7861 atatgcataa taatgcactt catcatcatt actcaaaggt ttataagcta aaatgataat
     7921 tttatcctta tcatagacat aaatattagc atctttgcgt tcaaaatgat caacacgatc
     7981 accgttgcct tttttggcaa gttgttcttg tttttgattt tgaattttaa ctgcttcatc
     8041 tatttctttc acatatttat cattaccaca tcctgatata aagactagta ataataatac
     8101 catcgccaca aatcgcttca atgctcccac tcctactatc aacttccaac taactttcaa
     8161 tataattaat actatacacc gtcaaacatc aatgcgctac aactactacc aatgcattta
     8221 atataaatat ccaaagaaat aacagttatg tatagtcaaa gaaaaatata tttcattttc
     8281 tatgtgtatt tgcaatcagt ttttgataaa ataaaaaaat agcattatta ataaattcaa
     8341 aaattacagt tcaattcaga gagggatggg ataaaatgaa ctttgtaacg ttgacttcgg
     8401 atgagttcaa tgcgtttaca acaaagcatt tttcacatta cacacaatca gctattcatt
     8461 acaatcatag agttgattta aaaggcgatg tgcatcttgt aggggttaaa gatgacaatg
     8521 gtcaagtgat tgcaggatgc ttattgacag aagcacgcac acttaaattt ttcaaatatt
     8581 tttatacaca tcgcgggcca gtgatggatt atacaaatca atcattagta gcatttttct
     8641 ttaaagcatt aacgtcatat ttaaagaaac aaaattgttt atatgtcctt gtagatccat
     8701 atttaattga aaatttacgc aatgcagacg gtgaaattgt taagtcttat gacaaccgag
     8761 catttgttag aacaatggac acattaggct ataagcatca aggttttcca gtcggttatg
     8821 attcaatgag tcaaatccgt tggttatctg tattagattt aaaggataaa acagaagacc
     8881 agttattaaa agaaatggat tatcaaacga gacgtaatat taaaaaaaca tatgatattg
     8941 gtgttaaaac taaaacgtta acgattgatg aaacgcaaac ctttttcgac ttattccata
     9001 tggccgaaga aaagcatggt ttcaaattcc gtgagttacc atactttgaa gaaatgcaaa
     9061 agttatacga tgaccacgcc atgttaaagt tggcgtatat tgatttaaac gagtatttaa
     9121 aaactttaca attaaagcaa cagcaattaa cagctgaact ctcaggtgtt gaagaggcat
     9181 tggaagaaaa tcctaattca aagaaaaata aaacgaaacg cacacagcta gaacaacagc
     9241 taaatagcaa taagcgtaaa atcgacaata caatagaaca aattgaacaa gatggtgcag
     9301 tcttaaactt agcttctgct ttgtttatct acaatgagca tgaagtttat tacttatcta
     9361 gtggttcaaa ccctaaatat aatgcttata tgggtgccta ccatttgcag tgggaaatga
     9421 ttaagtttgc taaagcgcat catattgatc gctataattt ctatggtatt accggtgact
     9481 tttcagagtc atcagaagat tatggcgtac aacaattcaa aaaaggcttt aacgcacatg
     9541 tagaagagta tatcggtgac tttattaagc ctatcaaacc attactatat aaggtacaaa
     9601 catacttaaa tcataaacgt cgttaacagg ttgctccaag attttggcaa tataacaaag
     9661 aaccacgcat catgtatatg gcatcatcgc catactaaaa catgatacgt ggttctattt
     9721 gattattctt catttataac atttaagaaa cgtcttaatt cttctgtttt cggacgattg
     9781 aacatctctt ctggagcccc ttgttctccg atcatgcctt catgaataaa tacaatgtta
     9841 ttagatactt ctttagcaaa acgcatttca tgtgtcacaa tgaccattgt catgccttca
     9901 ttagccaaat ctttaataac ctttaaaaca tcattcacaa gttcaggatc aagtgcagat
     9961 gttggttcat caaacaacat cactttaggg ttcattgcta gtgctcttgc aatagcaaca
    10021 cgttgttgtt gaccacctga taatgcatgt ggacgttgat ctttgacaag tgttaaacca
    10081 actttctcaa gtaactcaag tgatttccca cgtgcctcat cctttttcaa ctttttaact
    10141 gtgataagac cttccattac attttctaat gccgtcttat gcggaaaaag gttataactt
    10201 tgaaatacca taccagactg tttacgaact tctatttgtg attttttatc tttagatgta
    10261 tatgttttgc cgttaacata aactgtacct tcagttggaa tttctaacgc attaatcata
    10321 cgtaacaatg ttgttttacc tgaaccagat cgaccgatta aggttacaac ctcaccttgt
    10381 tcaacagata aatcaatacc tttgatgact tcaacatcat taaatgattt atggatattg
    10441 ttcaattgaa tcatgagcga taccctcttt caatataaga ttcatagata ccttggataa
    10501 ttgaaataat aaagcatacc acccagtaca ttagcgcaac taacacataa attgttaaat
    10561 attcatatgt tgtagacgca acttcttgag cttttctaaa catttcagcc actaaaataa
    10621 atcctaataa tgatgtatct ttgattaaac ttaaaaatgt attacctagt gcaggaatcg
    10681 acactcgaat tgcctgcggt aaaatgatac gttgtatcgt ttgaccatac gtcataccga
    10741 tagaatatgc agcttctgtt tgtcctttcg gtatagaaat aataccgcca cgaataattt
    10801 ccgaagcata cgcacctaca tttaatgata aaccaataat agcagccact acaggtgcca
    10861 atgtccattg gttgtcagcg tcatttgtta ataacctacc taattctgga ataccataaa
    10921 atatgataaa tagttgtact atcattggtg ttcctcgaat aatagataca tagacacgtg
    10981 aaatacttct taaaatttta ctcgttgaaa ttcgcattaa tgctgtaaat aatgcaataa
    11041 tcaatcctaa aacaaatgta actaatgtaa taggaattga atatttgacc aaaccttcta
    11101 gcataggtcc gaaagcttgt tttgcagcat ctagcgcatg ttgttgttcg ctatttagat
    11161 ttagaaacat cttgaccaaa ccatttctta cctattttag ctaattcacc gttttcctcg
    11221 atttttttca agccatcatt gaatttttga actgtttcat catctgcttt tttagaaaat
    11281 gcaaatgcag atctactttg ttcagcatta cctttgattg ctttgatctt agcattaggt
    11341 ttttgttttt tataatccaa gtatgacaga ctatcattaa atgtaccatc aacacgctta
    11401 gacaataata aatccattga ttggttaaag ccatcaactt ttgtaatatc agcaccttta
    11461 tccttagcta atttaccata attagatgtg aatgtttgtg ctaacttctt acctttaaca
    11521 tcatcaaaat ctttaatatc tttttcattt tcacgaataa ctaaaacagc acttgagaat
    11581 gtgtaaggct tagaaaattt atatttcttt tctctatcag gattaatacc tacttggttc
    11641 gcgattacat caaaacgccc tgcgtctaaa cctgcaaaca tagaatccca agaagtttca
    11701 ttaaatttaa gttttaaacc ttcttcctta gctactgctt taataacatc aatatcgtaa
    11761 ccagttaatt taccatcttt atcatggaaa ctaaatggtg cataagtccc ctcagtacca
    11821 acattaattg tcttgctatc tttattagct tccttgtctt tcgacgaatt gtttccacat
    11881 gcagccaata tgaaaacgaa agctatcatc acaaataaaa gtcttttcat agaatatatc
    11941 tccttattct tattattcta atcggaataa aaatatttta atctgaaatg ccggataagt
    12001 caatatgttg aacttttgct aaaaagcttt atatagctag caacttatat ttattgacga
    12061 gaatcaactt cttttttctt cccttgtaac ataaatgaac aaaagaaact aacaactgta
    12121 atcaataatg caaataaaaa tccagcgtga taaccatgca acatcgtatc aactttaatt
    12181 tgattcatca tatcaatttt gttcatgcca ttatagtctg acatagttgg agaaaagttt
    12241 ttacttgcat gagctaaaat agtaattaat gcagctgttc cgatagaacc agcaatttgt
    12301 tgtactgtgt ttgtcataga tgaaccgtgt gcattcattt ctggctttaa ttgattcatc
    12361 gtatgggtca ttactggaat taatcctaac gcgataccaa ccattcgaat cgcataaacc
    12421 gttgccaaca tgattgttga tgtttgttca tccattacaa caaaataagc cgtagtaata
    12481 acaacaatcg ccatacctac taaagcaagc tttctaggac caaacttttc atataaagca
    12541 cccgaagtca tcgacataaa tgccataaca attgctcctg gtaataaagt taacccagaa
    12601 tctaaagctg aacgatgcaa taaattttgc acaaaaatag gtaaaattgt ttccgaacca
    12661 atcatcgata ccattgtgac acccataata atgataccaa ctgtaaattg tttattttta
    12721 aatactgcaa aatttaataa tggtgttgat agccgatatt gacgtaatac aaataatgcg
    12781 actaaaacaa taccaccaat catagatact aatacgatag gattatcaaa acctttttct
    12841 gaaattgaac tcgttccata caataacccg ccgaaaccta gtacagaaaa aatgacagaa
    12901 ataaaatcaa taggtacttt aattgtagtt ccaacatttt ttatcgtttt aaatccaatt
    12961 aaaaatgtca cagctgcaat tggagcgaca acatggaaaa gtgatctcca gttaaaatat
    13021 tcaacaagat aacctgaaag agtaggtcca atagctggtg ctaagccaat taccaaacca
    13081 aatatcccca tatatttacc gcgttcatgc ggttggaaaa catccaaaat tgttgtcatc
    13141 atcaatggca tcataatacc tgcacctaac gcctgaataa ttctagcaac taataatgtt
    13201 gcaaagtgcg gactcaaacc gccgagtaat gtacctaaga aaaagataga aatacccact
    13261 aaaaacactt gtcttgttgt ataacgttgt ataacaagcg cggacaaagg aataacaatt
    13321 ccattagtca ataaaaaagc tgttgtcagc cattgaactt gtgtatatga aatttcaaaa
    13381 tctttcataa tacttggtaa agccgtcact aatagtgttt catttaataa tccaaaaaat
    13441 ccacccatca gcatagtaat aatcatcgtt aatttttgtt tcttcgacat ttaaagcttc
    13501 cccctcacca tctaaaaaac gacactcatt tttagatatc cggtaattat acccattttc
    13561 aaaaaaatta gcacgacttt attacaattt ctttaaaacg taatcattac tatttacata
    13621 tgagtaatta tcggtcataa tatatttaca aggagggata gagatgaaat tagatttaca
    13681 gactgctcgt cgtaatttaa atagccctaa cattaaaaca agaaagcgtg ctttaaagat
    13741 tattaagcaa cataaaagag cgaaataatt gttttaattt gactatattg tatgtctaac
    13801 tatattttcg agtatcccta gctcgttaat ataaactcta tacttaacta tttccttaca
    13861 ttacttcaca tatttaagag ctgcatatac actcactcct tgtgtacatg cagctctttt
    13921 tttataagta gtatttatct ataacttcta aatcatccgt taattcataa acaagtggtg
    13981 cacctgtttt aatttcataa ttaatgatat cttcatctga cacatcttca agatatttaa
    14041 tcaatgcgcg aattgaattt ccgtgtgcag aaactaatac cgtttgacca tctagcaaat
    14101 attgtgaaat atgatctgtc caaaatggta tcactcgaac taaagtatct ttcagacttt
    14161 cagaataagg catcatacgt ttatctaaat gattatatct acgatcagct aagtaagctt
    14221 cacgttgttc ttcggtttca gcaggtggtt tcacatcata agaacgacgc caaatatgta
    14281 cttgttcttc tccaaattct tttctagcat catctttatt taagccttgc aatccaccat
    14341 agtgacgctc atttaaacgc cagcttttat atacaggaat ccattgttgt ttagattcag
    14401 ttaaaatata atgcgttgta tctaaagcac gtgttaataa agatgtaaaa gctacatcga
    14461 tggcaatgtt attttctctt actttttcac ctgctctagt cgcttcatta ataccttgtt
    14521 cagataaatt aacatcttcc catccagtaa ataagttttt agcattccac tcgctttgtc
    14581 catgacgaca taaaattaat tttggcataa cttataacct ctttccttta atctttagga
    14641 cgttatttca gggatatttt aagatgattt aatcttagca attttctttt caatatgttt
    14701 taaaattcaa tgattaaatc aattatcact agacattaaa tacataaatc ctattcccca
    14761 ttttcatttt ttaattcata aatgaatcaa taaccaccta ataacaaatc atattataca
    14821 cctttgtccg tcatttttct aaggtttgaa aaatattttt aggcgtacct aaaaagaacg
    14881 taataaaaac gcctcctcag atatttattt atctatgaag acgtttaaat atattataga
    14941 tggtctggtt ctgggtgaac gtatactgag gaaatacctt ttttgtgcaa atgatgttcg
    15001 acattgtcac aaatttgatg cgcttctact aaggaaaggt tagcatctac aacaattgtg
    15061 acatcaataa acacactact tccatggtaa cgccctttaa tacttttaac tttttgtact
    15121 tcatcaactt ctaaaatatc attgcgatac gcttctaatt cagtttcatt gaaaccatca
    15181 ctcaacataa aaattgcttc tttaaaaata ccaaatccag tataaacgat tagtaagcct
    15241 agcaatgttg ctaaaataat atcgacaatt gggaaaccaa tttgcgtaaa aattaatcct
    15301 atcgccgttc caatgctgac taaactatct gataaattat ctttggcagc agaatttaaa
    15361 gaactacttt tcgttctttt cgctaggctt tgattgactg caaatacaat caacattata
    15421 agaccactga ttaagctgac gataattgtt attgcgttag gtacaacgtc atcttctttg
    15481 aacaaacgag gtgcattttg aataactact tggataccta caaacataat gacaaatgac
    15541 accaataatg aagaaatatt ttcagatttc aaatggccat aaggatgatt tcgatcagca
    15601 ggtttaattg aaattttcaa tccaataata acagctaaag aaacaataat atctgtcata
    15661 ttgtttaatg cgtcggctct tacagctgca gagttaaaga caaaacccgt gacatactta
    15721 acaatagata agattatata tacaattaaa ctcaaataag caccgcgttg cgccaattta
    15781 agattttcat tatgagacat gcgttgaacc accttgaatt agtata
//
LOCUS       DALMNS010000070        15660 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.070, whole genome shotgun sequence.
ACCESSION   DALMNS010000070 DALMNS010000000
VERSION     DALMNS010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 15660)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15660)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15660
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.070"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            133..819
                     /locus_tag="O6Y56_001804"
     CDS             133..819
                     /locus_tag="O6Y56_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain-containing protein"
                     /protein_id="HDB5575055.1"
                     /translation="MDKYQLKARPVVIRRELLDHYSDLGLDEQDLVILLKLIYASETS
                     NKQPSIELLQKGSTMQPRDITMVIQNLIQRELLELQVQKDEEGRFTEYMNLDPFFEKL
                     SHILKQQSMETKEQNSKEKFKQLFRVLEDTFARPLSPYEIETLNQWIDVDKHDSAIIQ
                     AALDEANSLNKLSFKYMDRILLNWKKNNVKTIDDSRKIREKFNKPKMTHTVKTVPKFD
                     WLNGENLDGK"
     gene            809..1468
                     /gene="nth"
                     /locus_tag="O6Y56_001805"
     CDS             809..1468
                     /gene="nth"
                     /locus_tag="O6Y56_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDB5575056.1"
                     /translation="MVSKKKALEMIDVIANMFPDAECELKHDNPFELTIAVLLSAQCT
                     DVLVNRVTTELFKKYKTPEDYLAVSDEELMNDIRSIGLYRNKAKNIKKLCQSLIDQFN
                     GEIPQTHKELESLAGVGRKTANVVMSVAFGEPSLAVDTHVERVSKRLGINRWKDNVRQ
                     VEDRLCSVIPRDRWNRSHHQLIFFGRYHCLARKPKCDICPLLEECREGQKRYKASLKE
                     A"
     gene            1473..1814
                     /locus_tag="O6Y56_001806"
     CDS             1473..1814
                     /locus_tag="O6Y56_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575057.1"
                     /translation="MTNITKEVFDILEQEIDVFAKNKTLGSSEAKPYLDEYHSKIIDY
                     FNQINDITGNIDFDNLNQYPVVPMNFKERYDYMIERKYHFMGYRQMKTFKTELIKMNA
                     SYQTRLKNKQV"
     gene            complement(2331..4514)
                     /locus_tag="O6Y56_001807"
     CDS             complement(2331..4514)
                     /locus_tag="O6Y56_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HDB5575058.1"
                     /translation="MTENKGSSQPKKNGNNGGKSNSKKNRNVKRTIIKIIGFMIIAFF
                     VVLLLGILLFAYYAWKAPAFTEAKLQDPIPAKIYDKNGELVKTLDNGQRHEHVNLKDV
                     PKSMKDAVLATEDNRFYEHGALDYKRLFGAIGKNLTGGFGSEGASTLTQQVVKDAFLS
                     QHKSIGRKAQEAYLSYRLEQEYSKDDIFQVYLNKIYYSDGVTGIKAAAKYYFNKDLKD
                     LNLAEEAYLAGLPQVPNNYNIYDHPKAAEDRKNTVLYLMHYHKRITDKQWEDAKKIDL
                     KANLVNRTAEERQNIDTNQDSEYNSYVNFVKSELMNNKAFKDENLGNVLQSGIKIYTN
                     MDKDVQKTLQNDVDNGSFYKNKDQQVGATILDSKTGGLVAISGGRDFKDVVNRNQATD
                     PHPTGSSLKPFLAYGPAIENMKWATNHAIQDESSYQVDGSTFRNYDVKSHGTVSIYDA
                     LRQSFNIPALKAWQSVKQNAGNDAPKKFAAKLGLNYEGDIGPSEVLGGSASEFSPTQL
                     ASAFAAIANGGTYNNAHSIQKVVTRDGETIEYDHTSHKAMSDYTAYMLAEMLKGTFKP
                     YGSAYGHGVSGVNMGAKTGTGTYGAETYSQYNLPDNAAKDVWINGFTPQYTMSVWMGF
                     SKVKQYGENSFVGHSQQEYPQFLYENVMSKISSRDGEDFKRPSSVSGSIPSINVSGSQ
                     DNNTTNRSTHGGSDTSANSSGTAQSNNNTRSQQSRNSGGLTGIFN"
     gene            complement(4511..5188)
                     /gene="recU"
                     /locus_tag="O6Y56_001808"
     CDS             complement(4511..5188)
                     /gene="recU"
                     /locus_tag="O6Y56_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RecU"
                     /protein_id="HDB5575059.1"
                     /translation="MLCIINNVYYQTCVVKFMNYPNGKPYRKNSAIDGGKKTAAFSNI
                     EYGGRGMSLEKDIEHSNAFYLKSDIAVIHKKPTPVQIVNVNYPKRSKAVINEAYFRTP
                     STTDYNGVYQGYYIDFEAKETKNKTSFPLNNIHDHQVEHMKNAYQQKGIVFLMIRFKT
                     LDEVYLLPYSKFEIFWKRYKDNIKKSITVDEIRKNGYHIPYQYQPRLDYLKAVDKLIL
                     DESEDRV"
     gene            5443..5622
                     /locus_tag="O6Y56_001809"
     CDS             5443..5622
                     /locus_tag="O6Y56_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001788819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575060.1"
                     /translation="MLLISRGVFDLNDFIRLKVFSSYNNIHDKILYLYRKFLDLLDLT
                     DNTFEKIVKSNYIEC"
     gene            5677..6027
                     /locus_tag="O6Y56_001810"
     CDS             5677..6027
                     /locus_tag="O6Y56_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YppE family protein"
                     /protein_id="HDB5575061.1"
                     /translation="MNDVVESLIYEVNNMQQNFENVKSQQQDHDFYQTVKPYTEHIDS
                     LLNEIKLHREFIIEVPYMNSKKFELLIANIEQLSVECHFKRTSRKLFIEKLKSVQYDL
                     QNILDGITKEGTYG"
     gene            6020..6583
                     /locus_tag="O6Y56_001811"
     CDS             6020..6583
                     /locus_tag="O6Y56_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1273 domain-containing protein"
                     /protein_id="HDB5575062.1"
                     /translation="MVKTVYVTGYKSFELNIFKDDAPEVHYLKQFIKHKIEQLLDEGL
                     EWVLIQGQMGIELWTAEVVIELQRTYDSLKFAVITPFQGHAEKWNEHNQSKYANIIKH
                     ADYVDSIFHTSYQGPFQFKQADQFMLEHSDQTLLIYDEEQEASPKFFKQMLVDFMDKT
                     NYTCDIVTFDELTAFINDLQWSEDQSF"
     gene            6597..6941
                     /gene="gpsB"
                     /locus_tag="O6Y56_001812"
     CDS             6597..6941
                     /gene="gpsB"
                     /locus_tag="O6Y56_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division regulator GpsB"
                     /protein_id="HDB5575063.1"
                     /translation="MSDVSLKLSAKDIYEKDFEKTMARGYRREEVDAFLDDIIADYQK
                     MADMNNEVVKLSEENHKLKKELEELRLRVATSRPQDNKSFSSNNTTTNTSSNNVDILK
                     RISNLEKAVFGK"
     gene            7004..7383
                     /gene="rnpB"
                     /locus_tag="O6Y56_001813"
     ncRNA           7004..7383
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="O6Y56_001813"
                     /product="RNase P RNA component class B"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00011"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00011"
     gene            7593..8738
                     /locus_tag="O6Y56_001814"
     CDS             7593..8738
                     /locus_tag="O6Y56_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HDB5575064.1"
                     /translation="MFQLLAVCPMGLEAVVAREIQELGYETNVENGRIFFEGDASAIV
                     KANLWLRTADRIKIVVGRFNATTFDELFEQTKALPWESIIDKEGNFPVQGRSVKSTLH
                     SVPDCQAITKKAIVERLRRAYNEKGWLNESGAKYPVEVAILKDNVLLTIDTSGSGLNR
                     RGYRLAQGEAPIKETLAASLIRLANWKGDTPLIDPFCGSGTIAIEACLIAQNIAPGFN
                     REFVSEQWNIMPANIYDDYRDEADKMADYDKEIEVYASDIDPEMVEIAKRNAEEVGLS
                     DIIKFSVKDVNTLTIDTEEPVALIGNPPYGERIGDREEVEEMYRYIGKLMKQHPFLST
                     YILTSNKEFEYLVDRKATKRRKLFNGYIECTYYQYWGKKTERKTIEN"
     gene            8822..9154
                     /locus_tag="O6Y56_001815"
     CDS             8822..9154
                     /locus_tag="O6Y56_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4889 domain-containing protein"
                     /protein_id="HDB5575065.1"
                     /translation="MGKKMGLGLSIALVVIGIAVVCLMIFSSQKTTYFGYMNSNTNAE
                     KVVSEKDGLVKHNIKVEPSNDFKPKKGDFVKLVSKDDGKTFYKHEIVKHDDVPHGLMM
                     KIHDMHMN"
     gene            complement(9363..10700)
                     /locus_tag="O6Y56_001816"
     CDS             complement(9363..10700)
                     /locus_tag="O6Y56_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDB5575066.1"
                     /translation="MKNTFNPLQRLHFYAAIFIAPLLITLTISGIGYLFFPEVENNIY
                     KNEFFGDSDVKTHQTLNDAVHQVERQYEGFFVSKVSILDEPYNKRITLSDMAGNQRYV
                     FLDHNNQFVADQNAKHTYSNVMRSIHSSLFTENTIINYLVELTACWTIFMILSGTYLL
                     IKKHLISNKSKALRWQKWHAMIGVIIAIPVFVLVLTGLPWSGFMGSKIAGMMDTNGDL
                     GQGELVINPPKSDLNELPWATRKNKQPASSEKGSSSHHGNAAMPQTKLDYQISIDKVV
                     EQAQKAGIKKPFSIVYPSDKHGTFIVSNTSNSGVTGLDVSPNKEQTLYFDQYSGKKLG
                     TIKYDDYGIIAKWFTWGIPLHEGHLFGILNKIINLFVCIALLVAIGMGFVSWIKRTKN
                     TAVKVPHRVKKPASISLIICLIVLGLLMPLFGLSLILVFIIELILYIKDRRAK"
     gene            11004..14444
                     /locus_tag="O6Y56_001817"
     CDS             11004..14444
                     /locus_tag="O6Y56_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDB5575067.1"
                     /translation="MINKEQLDLLYKLKKEVEKSRNEALLHTINQVIKKVYLQQYTCS
                     FVGHFSAGKSTLINLLIEQDILPSSPVPTTSNTAIVSVSDNHDIIANLPNQTYAKLSN
                     YDEVREMNRQNVDVESVEINFQSAKFENGFTLQDTPGVDSNVASHQSITEQYMYTSNM
                     IFYTVDYNHVQSELNFKFMKHINDVGIPVVFIINQIDKHQDDELSFSTFKSRVEKSIA
                     DWGIKLERTFYVSKFDHPENELEALSSYLVSLDQHRETIEDYTSRTVEYITEAQLDYI
                     QSEIQEVLEDLGIEEAEFEQAFLNSQQHQAISEEAQLLNNPDELMAFLKNKRKNILEN
                     AYIMPHNMREMLRSYLESMSQDFNVGGLFNKKKKKLQIRQQRLLTATDALQEHVNQQI
                     RQPMREDMSFVTRFINKKEASDKVLNQHYDVKPEMIEGLYQPQTSISNTYVLTFSDEV
                     VKAIKKYVEQQSTPIFKEIIENVQADELPTEESDDLKEYQRYTELNELRQSLTTKNYR
                     HYYIHLDESLDKLVDRQETTYQVATDNAQDNRDHQQLNQNTATTNMSIDIQKALDIIS
                     DVPLFKRTKQDIHETLTRIDNKLIKIGVFGTFSAGKSSLINALLGEHILVSSPNPTTA
                     ATTEISYGDESYITLKSQSQLLDEINAVVEYQNISFSTIEDFINSDLEKLKSHLNKNQ
                     LAFVHAVEKHYNLYVNMLENGEKHAINQQELKKWSAEDEYATFVKTVHIALMHDWLKG
                     KIIVDSLGLHSNNQRHTNETEQILTSSDLILYVSYFNHSFTDNDKAFIEHMKDMNQLN
                     ENQAFKMVINAADLAESQDDLEAVETYVSDALRQVHLQSDIFAVSSRNALQAEDKGID
                     QLKQSIQQFVDVESKSILEQQMIHQLQQMDRSYVEMITEFETNKADISRRQQRLTVYK
                     DKQRLQHQLIDATLQHTDNEVEEQVYHLNARLKLQLLDDVKSVFNSQMTQNSDFNEEK
                     KVSTRVYLDQIHQRLFLEQSLITERIKKYFNKQLTEQIAPIVQQLADLHVIVNPQFNF
                     ESANIEQPLLHIDFNDMLNALPKQLTKRKILNPNGQRDIHESICQSTLGLLQPQMGLL
                     RQQLELYVKQMAVEAESQFESFEANIQTQINDLLAFDLDTTLINQLKDKHQQLKTILY
                     "
     gene            14464..15342
                     /locus_tag="O6Y56_001818"
     CDS             14464..15342
                     /locus_tag="O6Y56_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease"
                     /protein_id="HDB5575068.1"
                     /translation="MPNKILLVDGMALLFRHFYATSLHKQFMYNSQGIPTNGIQGFVR
                     HIFSAIHEIRPTHVAVCWDMGQSTFRNDMFDGYKQNRSAPPEELIPQFDYVKEISEQF
                     GFVNIGVKNYEADDVIGTLAQQYSTDNDVYIITGDKDLLQCINDNVEVWLIKKGFNIY
                     NRYTLHRFNEEYALEPQQLIDIKAFMGDTADGYAGVKGIGEKTAIKLIQQYQSVENVV
                     ENIDALSAGQRNKINDNLDELYLSKRLAEIHTQVPIDSEALFEKMSFATTLNHILSIC
                     NEHELHVSGKYISSHF"
BASE COUNT         5681 a         2281 c         2661 g         5037 t
ORIGIN      
        1 actagtttta aaaaaatact gttatttaaa atttgtttgc tactagttaa atatattaag
       61 cattttagtc gaaaattaaa gaaaatgatt tatactatta agtaatggtt aaatttaaaa
      121 gggggcacga acatggataa atatcaatta aaagcaagac ctgtagtgat acgaagagaa
      181 ttattagacc attacagtga cttaggttta gatgagcaag atttagtcat tttgcttaaa
      241 ttgatttatg cttccgaaac atcaaataaa cagccttcaa ttgaattact tcagaagggc
      301 tcaactatgc aaccacgcga tattacaatg gttattcaaa atttgataca acgtgaattg
      361 ctagaattac aagttcaaaa agatgaagaa ggtagattta ccgaatatat gaatctagat
      421 ccttttttcg aaaaattaag tcatatattg aagcaacaaa gtatggaaac gaaagagcaa
      481 aatagtaaag aaaaatttaa acaattattt agagttttag aggatacatt tgcaaggccg
      541 ttatctccat atgaaataga aacgttaaat caatggattg atgttgataa acacgatagt
      601 gcaattatac aagcggcatt agacgaggcg aatagtttga ataaacttag ctttaaatat
      661 atggatcgta ttttacttaa ttggaagaaa aacaatgtca aaacaattga cgattctaga
      721 aaaataagag aaaaatttaa taaaccgaaa atgacgcaca cagttaaaac ggtacctaaa
      781 tttgattggt taaacgggga gaaccttgat ggtaagtaag aaaaaagcat tagaaatgat
      841 tgatgttata gcaaatatgt ttccggatgc agaatgtgaa ttaaaacatg ataatccgtt
      901 cgaattaact attgctgtat tattgtcagc gcaatgtaca gacgttctag taaatagagt
      961 aacaactgag ctgtttaaaa aatacaaaac gcctgaagat tatttggcag tcagtgatga
     1021 agaacttatg aatgatattc gttccatcgg tctgtatcgt aacaaagcta agaatattaa
     1081 gaaactttgt caatctttga ttgatcaatt taatggagaa ataccacaaa cacataagga
     1141 attagaaagt ttagcaggtg taggacgtaa aactgctaat gtagtcatga gtgtagcatt
     1201 tggtgaacct tcattagctg ttgatacgca tgtagaacgt gtttctaaac gcttaggtat
     1261 taatcgttgg aaagataatg tgagacaggt agaagaccgt ttatgttctg ttatacctag
     1321 agatagatgg aataggagcc atcatcaact cattttcttt ggaagatacc actgtttagc
     1381 ccgaaaacct aaatgcgata tttgtccact attagaagag tgtagagaag gacaaaaacg
     1441 ttataaagct agtttgaaag aagcgtgata acatgacaaa tattacaaaa gaggtatttg
     1501 atattttaga acaagagatt gatgtatttg ccaaaaataa gacattaggt tctagtgaag
     1561 caaagcccta cttggatgaa taccatagta aaattattga ttattttaat cagattaatg
     1621 acataactgg caatattgat tttgataatt taaatcaata tcctgttgtg ccaatgaatt
     1681 ttaaagaaag atatgattat atgattgaac gtaaatatca ttttatgggc tatcgacaaa
     1741 tgaagacctt taaaactgaa ttgattaaaa tgaatgctag ttatcaaaca aggttaaaga
     1801 ataagcaggt atagacaagt ttgatcattt cctaatgttg aaaagatgta aaactaattc
     1861 atgcacacat atttgtattt atgttaggtg tcgtgacatt acaacatttt aatataaaaa
     1921 ctgtccatct acatcataat ggatatcttg aggtatgttt taagatatct atttcgaatc
     1981 gtaggtggat ttcttatatc tatgaatgtg aaaatacgtt acaaacatgt tgatatttca
     2041 ctgattaacg tacacaggga attgataaac atatcaattt aaaacagcgt ctaagatgac
     2101 tatgagaaaa tataatcata attttaaaaa tgggaacaac catttttgta atttcaataa
     2161 tttaaaatag ctaaagatgt gaatatgaaa aactatttag atgtttcaaa atgaatgtga
     2221 atgactgatt ttacggtttc tactaatata gcaatagctt atgaatactt ataaaaaatc
     2281 ctcagctaca ccataaatat ggtataactg aggattttat gttgagtgga ttagttgaat
     2341 atacctgtta atccaccgct gtttctagat tgttgagatc tagtattgtt atttgattgt
     2401 gcagtaccac tgctgtttgc tgatgtgtca ctaccaccgt gtgtactacg atttgtagtg
     2461 ttgttatctt gactaccaga aacattgatt gatgggatac taccacttac tgagctagga
     2521 cgtttaaagt cttcgccatc tctagatgaa atttttgaca tcacattttc atataagaac
     2581 tgtggatatt cttgttggct atgtcccaca aatgagtttt caccatattg tttaacttta
     2641 ctgaagccca tccacactga catagtgtat tgaggtgtaa agccgttaat ccacacgtct
     2701 ttcgctgcat tatcaggtaa attatattgt gaataagttt cagcaccgta agtaccagta
     2761 cctgtcttag cacccatatt tactccagat acaccatggc catatgcaga accatatggt
     2821 ttaaatgtac cttttagcat ctcagctaac atgtatgcag tgtaatcact catcgcttta
     2881 tggctagtat gatcgtattc gattgtttca ccatcacgag taactacttt ttgaattgaa
     2941 tgcgcgttgt tataagtacc accgttagcg attgcagcaa atgctgatgc taattgtgtt
     3001 ggtgagaatt ctgaagcaga accaccaagt acttcagatg gaccaatatc gccttcgtag
     3061 tttaagccaa gtttggcagc gaatttctta ggtgcatcat taccagcatt ttgcttaact
     3121 gattgccaag cttttaaagc tgggatattg aaactttgtc gtaaagcatc ataaattgat
     3181 acagtaccgt gactcttcac atcgtagttt ctaaatgtag atccatcaac ttgatatgaa
     3241 gattcatctt gaatcgcatg gtttgttgcc catttcatat tttcaatggc aggtccatac
     3301 gctaagaaag gttttaaaga tgaaccagta gggtgaggat ctgttgcttg gtttctgtta
     3361 acgacgtctt tgaaatcacg tccaccagat atagcaacta aaccaccagt tttactatca
     3421 agaatcgttg caccaacttg ttggtcttta ttcttgtaga agctaccatt atcaacatca
     3481 ttttgtaatg ttttttgaac atctttatcc atgtttgtat aaattttaat accactttgt
     3541 aatacattac ctaaattttc atctttgaat gctttattat tcattaattc agattttaca
     3601 aagttaacgt atgaattata ctcagaatct tgatttgtat caatgttttg acgttcttca
     3661 gcagtacgat ttactaagtt cgcttttaaa tcgattttct tagcatcttc ccactgttta
     3721 tctgtaatgc gtttatgata atgcattaag tataaaacag tgtttttacg atcttcagca
     3781 gcttttggat gatcataaat attatagttg tttggaacct gaggtaaacc ggctaaataa
     3841 gcttcttccg ctaagtttaa atcttttaaa tctttattaa agtagtactt tgcagcagct
     3901 ttaatacctg ttacgccatc agaatagtaa attttattta gatatacttg gaagatatca
     3961 tctttactat actcttgttc taaacgatat gataagtatg cttcttgagc tttacgtcca
     4021 atagatttat gttgtgataa aaatgcatct ttaacaactt gttgtgttaa tgttgaggca
     4081 ccttcagaac caaatccacc agtcaagttc ttaccaattg caccgaataa acgtttataa
     4141 tcaagtgcgc catgttcgta gaaacgattg tcttcagttg caagtactgc gtctttcatt
     4201 gatttcggca cgtcttttaa atttacatgc tcatgtcttt ggccattatc taatgtttta
     4261 acaagttctc cgttcttgtc atatatcttt gcaggaatcg gatcttgtaa tttagcttcg
     4321 gtaaaagcag gtgctttcca agcataataa gcaaacaata agatacctag taaaagaaca
     4381 acgaaaaatg caataatcat gaagccaata atcttaataa tcgttctctt cacatttcta
     4441 ttcttttttg agttggattt cccaccatta ttaccatttt tcttaggctg agaagatcct
     4501 ttgttttccg tcatacgcgg tcctcacttt catctaatat caacttatca actgctttta
     4561 gatagtctaa tcttggttga tactgataag gaatatggta accatttttt cgtatttcat
     4621 caactgttat agacttttta atattatctt tatatctctt ccaaaatatt tcgaattttg
     4681 aatagggtaa aagataaact tcatctagcg ttttaaaacg aatcattaaa aacacaatac
     4741 ctttttgttg atatgcattt ttcatgtgtt cgacttgatg gtcatgaata ttatttaaag
     4801 gaaaggacgt cttgttttta gtttcctttg cttcaaaatc aatataataa ccttgataaa
     4861 cgccgttgta atcagttgtt gaaggtgtac gaaaataagc ttcgttaatc acagctttac
     4921 tccgtttagg atagttgaca ttaactattt gtactggcgt aggctttttg tgaataactg
     4981 caatgtcgct tttaagataa aacgcatttg aatgttcgat atctttttca agtgacatac
     5041 cacgtccacc atactcaata ttactaaagg cagcggtctt tttccctccg tctatagcac
     5101 tatttttacg atatggttta ccatttggat aattcataaa tttcaccaca caagtttggt
     5161 agtaaacgtt gtttattata cacaacatta tagtgaaaca ccaaacttaa attagtatat
     5221 atgcgaaaga cacaatacac caaagcttat tttaacgtga tttcagcatt aacacaataa
     5281 tattataata catttaccgt taatgttgga attttacaca caattttaat taattgaaaa
     5341 gttttgctta taaaaatgaa tactcattac aatatttttg aattttgtta taaaagtcaa
     5401 atcatgatca gtaattatta tttttgaggc aagtacaagt atgtgttgtt aatcagcaga
     5461 ggtgtatttg atttaaatga ttttattaga ttaaaagtat tttcatcgta taacaacata
     5521 cacgataaaa ttttgtattt atataggaag tttttagatt tacttgattt aacagataac
     5581 acatttgaaa aaatagttaa atcaaattat atagagtgtt aaaacatgac gaatacagta
     5641 tattgtgata aattaaaaaa tgtaggaggc gtcctcatga atgatgtagt cgaatcacta
     5701 atttatgaag ttaacaacat gcaacaaaat tttgaaaatg tgaaatcaca acaacaagat
     5761 catgattttt accaaactgt aaagccatat actgaacata ttgatagctt gctcaatgag
     5821 atcaaattac atcgtgaatt tattatagaa gtaccttata tgaattcaaa gaaatttgag
     5881 ctactgattg ctaacattga acaactttct gtcgaatgtc attttaagcg aacaagtaga
     5941 aagttattta tagaaaagct taaaagtgtt caatatgatt tacaaaatat attagatggc
     6001 ataactaaag agggcactta tggttaaaac agtttatgta acaggttaca aatcattcga
     6061 attaaacatt tttaaagatg acgcacctga agtacattat ttaaaacaat ttataaaaca
     6121 taaaattgaa caactgttgg atgaaggatt agaatgggtg ttaatacaag ggcaaatggg
     6181 tatagaatta tggactgcag aagttgttat tgaattacaa cgaacatatg attcgttaaa
     6241 gtttgctgta attacaccgt tccaaggaca tgcagaaaag tggaatgaac ataatcaaag
     6301 taagtatgcc aacataatta agcatgcaga ttatgttgat agtatttttc atacgtcata
     6361 tcaaggtcct tttcaattta aacaagcaga tcaatttatg cttgaacatt cggatcaaac
     6421 attgctcatt tatgatgagg aacaagaggc gagtcctaag ttcttcaagc agatgttagt
     6481 tgattttatg gataaaacaa actatacttg tgatattgtg acgttcgatg aattaacagc
     6541 attcatcaat gacttacagt ggtctgaaga tcaaagtttc taatgaggtg gaaaaaatgt
     6601 cagatgtttc attgaaatta tcagcaaaag atatttatga aaaagatttt gaaaaaacaa
     6661 tggctcgtgg ctatagaaga gaagaagtag atgcattttt agatgacatt attgctgatt
     6721 atcaaaaaat ggccgatatg aataatgaag ttgtaaaatt atcagaagag aatcacaaac
     6781 ttaaaaaaga attagaagaa ttacgactac gtgtagcaac atctagacct caggacaata
     6841 aaagtttttc ttcgaataat acaacaacaa atacatcttc aaataatgta gatattttaa
     6901 aacgtatttc aaacttagaa aaagctgtat ttggtaaata attactaaat acaaaagttt
     6961 aactgtctta ctaataatga ctatgttata attttaaaag tgatattttg ggtaatcgct
     7021 atattatata gaggaaagtc catgctcaca cagtctgaga tgattgtagt gttcgtgctt
     7081 gatgaaacaa taaatcaagg cattaatttg acggcaatga aatatcctaa gtctttcgat
     7141 atggatagag taatttgaaa gtgccacagt gacgtagctt ttatagaaat ataaaaggtg
     7201 gaacgcggta aacccctcga gtgagcaatc caaatttggt aggagcactt gtttaacgga
     7261 attcaacgta taaacgagac acacttcgcg aaatgaagtg gtgtagacag atggttatca
     7321 cctgagtacc agtgtgacta gtgcacgtga tgagtacgat ggaacagaac atggcttata
     7381 gaaatatcac tactagttta gctctcctag atgatggaga gcttttttca tgaaaagaac
     7441 acttaaaatt aacgccttgt cttgatataa tgacactgcc ttgttttaaa atgataagca
     7501 aatgcgttaa tgtatcagcg attaaatttg ttggaaatgt ataaaaaaac acaagctaag
     7561 aataaaatac ctgtataaaa ggagaatcat atatgtttca attacttgca gtttgtccga
     7621 tgggattaga agctgttgtt gctagggaaa ttcaagaatt aggctatgaa acaaatgttg
     7681 aaaatggccg tatatttttt gaaggagacg caagtgcaat tgtaaaggca aatttatggt
     7741 tgcgcacagc agaccgaatc aaaattgttg ttggacgttt taacgcaaca acgtttgacg
     7801 aattattcga acaaaccaaa gcgctccctt gggaatctat tattgataaa gaaggtaact
     7861 tcccagttca aggtagaagc gttaaatcaa cactacatag tgtgccagat tgtcaggcga
     7921 taactaagaa agctattgtt gaacgattac gtcgcgcata taacgaaaaa ggttggttaa
     7981 atgaatcagg tgcgaaatac cccgttgaag ttgccatttt aaaagataat gtattattga
     8041 ctatcgacac atcaggatct ggtttgaaca gacgtggtta tagattagca caaggtgaag
     8101 caccaattaa agaaacgttg gcagcaagtt taatccgtct tgcaaactgg aaaggtgata
     8161 cacctttaat tgatccattt tgcggttcgg gtacaatagc tatagaagct tgtttaattg
     8221 ctcaaaatat cgcacctggt tttaatcgcg agttcgtatc agagcaatgg aacatcatgc
     8281 cagcaaatat ttatgatgat taccgtgatg aagcggataa gatggctgat tatgataaag
     8341 aaatcgaagt atatgcttct gatatcgatc ctgaaatggt agagattgct aagcgtaacg
     8401 ctgaagaagt tgggttgtct gatattatta aatttagtgt aaaagatgtc aatacgttaa
     8461 caattgatac agaagaaccg gtggcgttaa ttggaaatcc tccatatggt gaacgtattg
     8521 gtgatcgtga agaagttgaa gaaatgtacc gttatattgg taaactaatg aaacaacatc
     8581 catttttatc tacatacatt ttaacaagta ataaagaatt tgaatattta gtagatcgta
     8641 aagcaacgaa gcgacgtaag ttatttaatg gatatataga atgtacttat tatcaatact
     8701 ggggtaaaaa aacagaacgt aaaactattg aaaactaaag tgtttctaat gtgtgactaa
     8761 aattagtaat aattaagttc tcatgataat aggtattttt gaaaaatgga ggagtctata
     8821 aatgggtaaa aaaatgggtc taggtttatc tatagcattg gttgttattg gtattgccgt
     8881 tgtatgttta atgatttttt ctagtcaaaa aacgacttat tttggttata tgaatagtaa
     8941 tacaaatgca gaaaaagttg tcagtgaaaa agatggatta gtcaaacata atatcaaagt
     9001 agaaccatca aatgatttta aaccgaaaaa aggagacttt gtaaaattag tttctaaaga
     9061 tgatgggaag acattttata aacatgaaat tgttaaacat gatgacgtcc cacacggttt
     9121 aatgatgaaa attcacgaca tgcatatgaa ttaataaaaa gcatctataa cgtaatttgg
     9181 aagaagtaaa gtaatcttct tatacgtttt agatgctttt ttatcttcaa attcaaaaaa
     9241 tcggacagat gaaaagtaaa aaacttttta tcagttcgat ttattataga gcccgtttta
     9301 agtaattaga gagtcgagaa tcattttgta aatttcgtca gttcaaaact ttaagtgcat
     9361 gattatttag cacgacgatc tttaatatat aatattaatt caattataaa tactaggata
     9421 agtgataatc caaataatgg cattaatagt cctaatacaa ttaaacatat aatgagtgat
     9481 atagatgctg gtttttttac gcgatgtggt acttttactg cagtattttt tgtacgcttt
     9541 atccaagaga caaatcccat accaatggct actaataaag cgatacatac aaataaatta
     9601 atgattttgt ttaaaatacc gaataaatga ccttcgtgaa gcggaatgcc ccatgtaaac
     9661 catttagcaa taataccgta gtcatcatat ttaatcgtac ctagcttttt accgctatat
     9721 tggtcgaaat aaagtgtttg ttccttgtta ggtgatacat ctagcccagt aacacctgaa
     9781 ttactagtat tagatacaat aaaggtacca tgtttatcac ttggatatac gattgaaaac
     9841 ggctttttaa taccagcttt ttgcgcctgt tcaacgacct tatcaataga tatttgataa
     9901 tctaatttgg tttgaggcat tgctgcatta ccatgatgac tacttgaacc tttttcggat
     9961 gaagctggct gtttattttt acgagtagcc caaggtaatt cattcaaatc tgatttaggt
    10021 ggattaatca ctaattcacc ttgaccaagg tcaccgtttg tgtccatcat accggcaatt
    10081 ttactgccca taaaaccaga ccatggcaat ccagttaaga ctaatacaaa cactggaatt
    10141 gcaatgataa ctccaatcat tgcgtgccac ttttgccaac gaagtgcctt acttttgtta
    10201 gaaattaaat gcttcttaat gagtaaataa gtaccagata aaatcatgaa tatcgtccaa
    10261 catgcggtta actcaactaa ataattaata atagtatttt cagtaaacaa agaactatgt
    10321 atacttcgca tcacattaga atacgtatgt ttcgcatttt gatctgcaac aaattgattg
    10381 ttatgatcta gaaagacgta acgctgattt cctgccatat cactcagtgt aattcgtttg
    10441 ttatatggtt catcaagtat gctaacttta cttacaaaga atccttcata ttgtcgttca
    10501 acttgatgta ctgcatcatt taatgtttga tgcgttttta catcactgtc accaaaaaac
    10561 tcattcttat aaatattatt ttcaacttct ggaaagaaca agtaaccaat gcccgaaatg
    10621 gttaaagtga ttaacagtgg agcaataaat attgctgcat agaaatgtaa tctttgtaat
    10681 ggattaaatg tatttttcat atttccctcc caattggcta ttatacggtg tcaattctgt
    10741 gacgtgtgtg aacaaactgt gacaatattt attttctaga aaaatttaac gatgatttgt
    10801 gatttttaga aaaatgaact tttaagttgg aatgtttgaa gaaaattgat tattcgtatg
    10861 ttttatcaag cagctatgat aaaatttaaa cataatacaa tgcgagccat ttaacgatct
    10921 atgtttaaat ggacatcgat attgtatgaa ttcgttttaa caagcaagta tttctatgtg
    10981 aacgaaccaa aggggaaagt aacatgatta ataaagaaca attagatctt ttatataaat
    11041 taaaaaaaga agttgaaaag tcgcgaaatg aagcactttt acatacaatt aaccaagtaa
    11101 ttaagaaagt atatttgcag caatatacat gttcgttcgt tggacatttt tctgcaggta
    11161 aatcgacact gataaattta ttaattgaac aagatatctt accaagttca cctgtaccaa
    11221 cgacaagtaa tactgctatc gtgtcagttt cagacaatca cgatattatt gctaatttgc
    11281 cgaatcaaac gtatgccaaa ttatctaatt atgatgaagt aagggaaatg aatcgccaaa
    11341 atgtcgacgt tgaatctgta gaaattaatt ttcaatcagc taaatttgaa aatgggttta
    11401 cgttgcaaga tacaccaggt gttgattcaa atgttgcatc acatcagtca ataacagaac
    11461 aatatatgta tacaagtaat atgatatttt atacggttga ctataaccac gttcaatctg
    11521 aacttaactt taagtttatg aagcatataa atgatgttgg aatacctgtt gtgtttatca
    11581 ttaatcaaat tgacaagcat caagacgatg aattgtcatt ctctacgttt aaatcacgag
    11641 ttgaaaaatc aattgcagat tggggtatta aattagaacg caccttttat gtatcgaaat
    11701 ttgatcaccc tgaaaatgaa cttgaagcat tatcaagtta tctagtttca ttagatcaac
    11761 atagagagac aattgaggat tatacatcaa gaacggttga atatattacc gaagctcagc
    11821 tagattacat tcagtctgaa attcaggaag tactagaaga tttaggtatc gaagaagcag
    11881 agtttgaaca agcattttta aatagtcaac aacatcaagc aattagtgaa gaggcacaac
    11941 ttttaaataa tccagatgaa ttaatggcat ttttaaagaa taagcgtaaa aatattttag
    12001 aaaatgcata cattatgccg cataatatga gagaaatgtt acgaagttat ttggagagta
    12061 tgtctcaaga ctttaatgtt ggcggccttt ttaataaaaa gaagaaaaag ctacaaattc
    12121 gacaacagcg attattaaca gcgacagatg cgttacaaga acatgttaat caacaaattc
    12181 gtcaaccaat gcgagaagat atgtcatttg ttacgcgttt tatcaataaa aaagaagctt
    12241 cagataaagt attaaatcag cattatgacg ttaagccgga aatgattgaa ggtttatatc
    12301 aaccacaaac atcaatcagc aatacttatg tacttacatt ttcagacgaa gtggttaaag
    12361 ccattaagaa atatgttgaa caacaatcaa caccgatttt taaagaaata atagaaaatg
    12421 tgcaggcaga tgaattacca acagaagaaa gtgatgattt aaaagaatat caacgttata
    12481 cagaattaaa tgagctgcgt cagtcattga cgactaagaa ttatcgtcac tactatattc
    12541 atttagatga atctctagat aaattagtag atcgacaaga gacaacatat caagtggcta
    12601 ctgataatgc tcaggataat cgtgatcatc agcagctaaa tcaaaataca gctacaacaa
    12661 atatgtctat agatattcaa aaagcacttg atataatttc ggatgtgcct ttgttcaagc
    12721 gtacaaagca ggatatccac gaaacattaa cacgtataga taataaatta ataaaaatag
    12781 gtgtatttgg aacatttagt gcgggtaaaa gtagtttgat aaatgcatta ttaggcgagc
    12841 atattttagt cagttctcca aatcctacta cagcagctac tacagaaata tcttatggag
    12901 atgagagtta tataacgcta aaatcacaat cgcaattatt agatgaaatt aatgcagtag
    12961 ttgaatacca aaatatatct ttttcaacta tagaagactt tattaattca gatttagaaa
    13021 agttaaaatc acatttaaat aaaaaccaac ttgcttttgt tcatgcagtt gaaaaacatt
    13081 ataatttgta tgtcaatatg ttagaaaatg gtgaaaaaca tgccattaat caacaagaat
    13141 tgaaaaagtg gagtgcagaa gatgaatacg caacatttgt taaaacagta cacattgcat
    13201 taatgcatga ttggttaaaa ggtaaaataa ttgttgattc attagggcta cactcaaata
    13261 accaaaggca tacaaatgaa accgagcaaa ttttaacttc ttcagactta atattgtatg
    13321 taagttattt taatcattca tttactgata atgacaaggc gtttatagaa cacatgaaag
    13381 atatgaacca actgaatgaa aaccaagcat ttaaaatggt aattaatgct gctgatttag
    13441 cagaaagtca agatgatctt gaagcggttg aaacatatgt atcagatgca ttaagacaag
    13501 tacacttaca atcagacatt tttgctgtat caagtcgaaa tgcattgcaa gctgaagata
    13561 agggtattga tcaattaaaa caaagcatac aacaatttgt tgatgttgaa tctaaatcaa
    13621 ttttagaaca acaaatgatt catcagcttc aacaaatgga tcgttcttat gtagagatga
    13681 ttacagaatt tgaaacaaat aaagctgata tttcacgtcg ccaacaaagg ttaacagtct
    13741 ataaagataa acagcgttta caacatcaat taattgatgc gacgttacaa catacagaca
    13801 acgaagttga agaacaagtt tatcatttaa atgcccgttt aaaactacaa ctacttgacg
    13861 atgttaaatc agtgtttaat tctcaaatga cgcaaaatag tgattttaat gaagaaaaga
    13921 aagtgtctac gagagtatac ttagatcaaa ttcatcaacg attgttttta gagcaatctt
    13981 taattacaga acgtataaaa aaatacttta ataagcaact cactgagcaa attgcaccaa
    14041 tcgttcaaca attagcagat ttacatgtca ttgttaatcc tcagtttaac tttgaatcag
    14101 ctaatataga gcaaccatta ttgcacatcg atttcaacga tatgctaaat gcattgccta
    14161 aacaattgac aaaacgtaaa attttgaatc caaatgggca aagagatata catgaatcaa
    14221 tttgtcaaag tacgttagga ttattacaac cacaaatggg attattgagg caacagcttg
    14281 aattatatgt aaagcaaatg gctgtagaag ctgaatcgca atttgaaagt tttgaagcta
    14341 atattcaaac gcaaataaac gatttattag catttgattt agatacaaca cttatcaatc
    14401 aattgaaaga taaacatcaa caactgaaaa ctattttata ttaagaaaga aggaacgttt
    14461 taaatgccta ataaaatatt acttgtagat ggtatggcgc tattatttag acatttctac
    14521 gctacaagtc ttcataaaca atttatgtac aattcacaag gtatacctac aaatggaata
    14581 caaggatttg tgcgtcatat cttttcggca atacatgaaa tacgccctac acatgtagct
    14641 gtatgttggg atatgggaca atcaactttt agaaatgata tgtttgatgg ttataagcaa
    14701 aatcgttctg caccaccaga agaattgata ccacaatttg attatgttaa agaaatttca
    14761 gagcaatttg gctttgtaaa tattggcgtt aaaaactatg aagcggatga tgttataggt
    14821 acattagcac aacaatattc aactgataac gatgtctata ttattacggg ggacaaagat
    14881 ttactgcaat gtattaatga caatgttgaa gtttggctaa ttaaaaaagg atttaacatt
    14941 tataatagat atacattaca tcgttttaac gaagaatatg cccttgaacc acaacaacta
    15001 atcgatatta aagcgtttat gggtgataca gcagatggat atgcaggtgt taaaggaatt
    15061 ggtgagaaaa cggctattaa gttaattcag caatatcaaa gcgttgaaaa tgtggttgaa
    15121 aacattgatg cattatcagc tgggcaacgt aataagatta atgacaattt agatgaacta
    15181 tatttatcaa agcgactggc tgaaattcac acacaagtac caattgatag tgaagcgctt
    15241 tttgagaaaa tgtcatttgc aacaacgctt aatcatattt tatcaatttg taacgaacat
    15301 gaattacatg tttcaggaaa atatatttca tcccattttt aaagagtata agattttatg
    15361 aaaaattaaa ccaattaagt ataaaaagac tatttctatc gatacaaggt agaaatagtc
    15421 tttttgcgta tttggatatg tcaaagtgaa taaataagcc gaattttgat tgatacatat
    15481 ttgattaatc aatagagttt aaagaattat atttcatcca aataaattac catacactac
    15541 aaaatagtac agttacaact ttattcatta aaaaaatgga tttgattaat tagtttttga
    15601 gtcaatgtat taatacaact ataaatcaaa tggagtataa gaaataaata tagtggtata
//
LOCUS       DALMNS010000071        15452 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.071, whole genome shotgun sequence.
ACCESSION   DALMNS010000071 DALMNS010000000
VERSION     DALMNS010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 15452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15452
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.071"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..267
                     /locus_tag="O6Y56_001819"
     CDS             <1..267
                     /locus_tag="O6Y56_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1433 domain-containing protein"
                     /protein_id="HDB5575069.1"
                     /translation="KHNTEEPNNIKSVHFTNLETSPMGSAVIKGYINENKEDDFVAYS
                     TPENDFQFSGDLIKSERLSELLKPAHERKSPDDIKKELNKKKSH"
     gene            285..683
                     /locus_tag="O6Y56_001820"
     CDS             285..683
                     /locus_tag="O6Y56_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001824581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1433 domain-containing protein"
                     /protein_id="HDB5575070.1"
                     /translation="MSKKHGFIIIGVVLCVCMLIAGIHFKMKYDEKEKQKAIYYKEQQ
                     ERITLYLKHNTIEPNTIKSVHFTNLETSPMGSAVIEGYINENKKDDFVAYATPEHNYQ
                     FGGAMIKSEGVDKLLKPAHERKSPDDIKKN"
     gene            721..1140
                     /locus_tag="O6Y56_001821"
     CDS             721..1140
                     /locus_tag="O6Y56_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1433 domain-containing protein"
                     /protein_id="HDB5575071.1"
                     /translation="MTKKHVFIIIGVILCICIVATVIHFKMKYDEKEKQKAIYYKEQQ
                     ERITLYLKHNTKESNTIKSVHFTSLKRGPMGDAVIEGYINENKKDDFVAYGSPEHNYQ
                     FGGDMIESEKLSELLKPANQLKSPEKIKEELDKKEGH"
     gene            1595..2017
                     /locus_tag="O6Y56_001822"
     CDS             1595..2017
                     /locus_tag="O6Y56_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDB5575072.1"
                     /translation="MPYNYKKQNGELMSVMSQGEKFIHQSPVNDELSALIKLLISKIN
                     GCHYCVDIHKKELKELGVTQMKIDEVLSFRHLDLFTDQEKVTLEFAEMLNSIKDFKKF
                     EIIDRLKSFYDEEQIIDLVFVVNQINGWNRLNIISDKL"
     gene            complement(2129..3667)
                     /locus_tag="O6Y56_001823"
     CDS             complement(2129..3667)
                     /locus_tag="O6Y56_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family transporter"
                     /protein_id="HDB5575073.1"
                     /translation="MTSKHQQKGSIVNRFLNSVEKIGNKLPDPSVLFFLMCVGLAIMT
                     WVISLFNVSVKHPGTHQTIYIKNIISHDGFTMIMNDTIKNFSEFPALGLVLAVMIGIG
                     VAEKTGYFDKLMISVVNRAPRFLILPTIILIGILGSTAGDAATIILPPLAAMLFIKIG
                     YHPIAGLTMAYASAVGGFAANIVVGMQDALVYSFTEPATRIVSESIKTNVAMNWYFIA
                     ASVVVLLPTILLVTTKLIIPRLGQYDDRLMHDDHEETSSHITDKEAHALKWANISFIV
                     TIILLIITAIPEHSFLRNAKTGSLLDDAPLINGVGLIILVVFLVPGLVYGILSKEIKN
                     TKDLGKMFGDAVGSMGTFIVIVFFAAQLLAYLKWSNLGIIAAVKGAKLLEHQNGIVLI
                     LGIIVLSAMVNMLIGSASAKWGILGPIFVPMLILIGFHPAFTQVIYRVGDSITNPITP
                     MMPYLPLLLTYAQKYDKRMKLGALLSSLMPYSIALSIVWTVFVIIWFLLGIPVGPGGP
                     IFVK"
     gene            3902..4720
                     /locus_tag="O6Y56_001824"
     CDS             3902..4720
                     /locus_tag="O6Y56_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002503368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDB5575074.1"
                     /translation="MKRLENKVAVVTGASTGIGQASAIALAQEGAYVLAVDIAEAVSE
                     TVDKIKSNGDKAKAYVVDIASEQQIDNFASEIREQFGHVDVLFNNAGVDNAAGRIHEY
                     PTDVYDKIMNVDMRGTFLMTKMMLPLMMTKGGSIVNTSSFSGQAADLYRSGYNAAKGA
                     VINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDKEGEAFRENQKWMTPLG
                     RLGKPEEVGKLVVFLASDESSFITGETIRIDGGVMDYTWPGEMLSDDSWKRTLE"
     gene            4984..5346
                     /locus_tag="O6Y56_001825"
     CDS             4984..5346
                     /locus_tag="O6Y56_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575075.1"
                     /translation="MLKEKESFRLLYQAIREIADKIGGNQLETNSVSLLLLDFDFEHE
                     VFDELHLAILKYLNTVSIENISHSELLNLIGNTIPEDREINTFVKNKIIIGFANNYFP
                     ELQVLANEIKSDMASSLK"
     gene            6095..6916
                     /gene="cntK"
                     /locus_tag="O6Y56_001826"
     CDS             6095..6916
                     /gene="cntK"
                     /locus_tag="O6Y56_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine racemase CntK"
                     /protein_id="HDB5575076.1"
                     /translation="MNRQVIEFSKYNPSGNMTILVHSKHDASEYASIANQLMAATHVC
                     CEQVGFIESTQNDDGNDFHLVMSGNEFCGNATMSYIHHLQESHLLKDQQFKVKVSGCS
                     DLVQCAIHDCQYYEVQMPQAHRVVPTTINMGNHSWKAIEIIYETYVHYVIPVNQVTTE
                     IQHLVETYVREQQWNHKYKTVGMMLFDEQRQFLQPLIYIPEIQSLIWENSCGSGTASI
                     GVFNNYQRNDACKDFTVHQPGGSILVTSKRCHQLGYQTSIKGQVTTVATGKAYIE"
     gene            6927..7745
                     /gene="cntL"
                     /locus_tag="O6Y56_001827"
     CDS             6927..7745
                     /gene="cntL"
                     /locus_tag="O6Y56_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-histidine (S)-2-aminobutanoyltransferase CntL"
                     /protein_id="HDB5575077.1"
                     /translation="MNNFNNEIKLILQQYLEKFEAHYERVLQDDQYIEALETLMDDYS
                     EFILNPIYEQQFNAWRDVEEKAQLIKSLQYITAQCVKQVEVIRARRLLDGQASTTGYF
                     DNIEHCIDEEFGQCSIASHDKLLLVGSGAYPMTLIQVAKETGASVIGIDIDPQAVDLG
                     RRIVNVLAPNEDITITDQKVSELKDIKDVTHIIFSSTIPLKYSILEELYDLTNENVVV
                     AMRFGDGIKAIFNYPSQETAEDKWQCVNKHMRPQQIFDIALYKKAAIKVGITDV"
     gene            7738..9039
                     /gene="cntM"
                     /locus_tag="O6Y56_001828"
     CDS             7738..9039
                     /gene="cntM"
                     /locus_tag="O6Y56_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_096659686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylopine dehydrogenase CntM"
                     /protein_id="HDB5575078.1"
                     /translation="MSKLLMIGTGPVAIQLANICYLKSDYEIDMVGRASTSEKSKRLY
                     QAYKKEKQFEVKIQNEAHQHLEGKFEINRLYKDVKNVKGEYETVVMACTADAYYDTLQ
                     QLSLETLQSVKHVILISPTFGSQMIVEQFMSKFSQDIEVISFSTYLGDTRIVDKEAPN
                     HVLTTGVKKKLYMGSTHSNSTMCQRISALAEQLKIQLEVVESPLHAETRNSSLYVHPP
                     LFMNDFSLKAIFEGTDVPVYVYKLFPEGPITMTLIREMRLMWKEMMAILQAFRVPSVN
                     LLQFMVKENYPVRPETLDEGDIEHFEILPDILQEYLLYVRYTAILIDPFSQPDENGHY
                     FDFSAVPFKQVYKNEQDVVQIPRMPSEDYYRTAMIQHIGKMLGIQTPMIDQFLTRYEA
                     SCQAYKDMHQDQHLSSQFNTNLFEEDKALVTKFLEINRTLS"
     gene            9182..10780
                     /gene="cntA"
                     /locus_tag="O6Y56_001829"
     CDS             9182..10780
                     /gene="cntA"
                     /locus_tag="O6Y56_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylopine-dependent metal ABC transporter
                     substrate-binding protein CntA"
                     /protein_id="HDB5575079.1"
                     /translation="MRKLTKMSAMLLASGLILTGCGGNKGLEEKKENKQLTYTTVKDI
                     GDMNPHVYGGSMSAESMIYEPLVRNTKDGIKPLLAKKWDVSEDGKTYTFHLRDDVKFH
                     DGTPFDADAVKKNIDAVQENKKLHSWLKISTLIDNVKVKDKYTVELNLKEAYQPALAE
                     LAMPRPYVFVSPKDFKNGTTKDGVKKFDGTGPFKLGEHKKDESADFNKNDQYWGEKPK
                     LNKVQAKVMPAGETAFLSMKKGETNFAFTDDRGTDSLDKDSLKQLKDTGDYQVKRSQP
                     MNTKMLVVNSGKKDNAVSDKTVRQAIGHMVNRDKIAKEILDGQEKPATQLFAKNVTDI
                     NFDMPTRKYDLKKAESLLDEAGWKKGKDSDVRQKDGKNLEMAMYYDKGSSSQKEQAEY
                     LQAEFKKMGIKLNINGETSDKIAERRTSGDYDLMFNQTWGLLYDPQSTIAAFKAKNGY
                     ESATSGIENKDKIYNSIDDAFKIQNGKERSDAYKNILKQIDDEGIFIPISHGSMTVVA
                     PKDLEKVSFTQSQYELPFNEMQYK"
     gene            10793..11728
                     /locus_tag="O6Y56_001830"
     CDS             10793..11728
                     /locus_tag="O6Y56_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5575080.1"
                     /translation="MFKFILKRIALMFPLMIVVSFMTFLLTYITNENPAVTILHAQGT
                     PNVTPELIAETNEKYGFNDPLLIQYKNWLLEAMQFNFGTSYITGDPVAERIGPAFMNT
                     LKLTIISSVMVMITSIILGVVSALKRGKFTDRAIRSVAFFLTALPSYWIASILIIYVS
                     VKLNILPTSGLTGPESYILPVIVITIAYAGIYFRNVRRSMVEQLNEDYVLYLRASGVK
                     SITLMLHVLRNALQVAVSIFCMSIPMIMGGLVVIEYIFAWPGLGQLSLKAILEHDFPV
                     IQAYVLIVAVLFIVFNTLADIINALLNPRLREGAR"
     gene            11725..12594
                     /locus_tag="O6Y56_001831"
     CDS             11725..12594
                     /locus_tag="O6Y56_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5575081.1"
                     /translation="MIILKRLLQDKGAVIALGIIVLYVFLGLAAPLVTFYDPNHIDTA
                     NKFAGMSFQHLLGTDHLGRDILTRLIYAIRPSLLYVFVALFVSVLIGSILGFLSGYFQ
                     GFVDALIMRACDVMLAFPSYVVTLALIALFGMGAENIIMAFILTRWAWFCRVIRTSVM
                     QYTASDHVRFAKTIGMNDMKIIHKHIMPLTLADIAIISSSSMCSMILQISGFSFLGLG
                     VKAPTAEWGMMLNEARKVMFTHPEMMFAPGIAIVIIVMAFNFLSDALQIAIDPRISSK
                     DKLRSVKKGVVQS"
     gene            12591..13406
                     /locus_tag="O6Y56_001832"
     CDS             12591..13406
                     /locus_tag="O6Y56_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5575082.1"
                     /translation="MTLLTVKHLTITDTWTDQPLVSDVNFTLTKGETLGVIGESGSGK
                     SITCKSIVGLNPERLRVTGDITFDGKPMLSLSEAQLKKYRGKDIAMVMQQGSRAFDPS
                     TTVGKQMFETMKVHTSMSTQEIEKTLIEYMDYLSLKDPKRILKSYPYMLSGGMLQRLM
                     IALALALKPKLIIADEPTTALDTITQYDVLEAFIDIKKHFDCAMIFISHDLTVINKIA
                     DRVVVMKNGQLIEHGTRESVLHHPEHVYTKYLLSTKKKINDHFKHVMRGDVHD"
     gene            13399..14148
                     /locus_tag="O6Y56_001833"
     CDS             13399..14148
                     /locus_tag="O6Y56_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5575083.1"
                     /translation="MIKIKDVEKSYQSAHVFKRRRTPIVKGVSFECPIGATIAIIGES
                     GSGKSTLSRMILGIEKPDKGCVTLNDQPMHKKKVRRHQIGAVFQDYTSSLHPFQTVRE
                     ILFEVMCQCDGQPKDVMEVQAITLLEEVGLSKAYMDKYPNMLSGGEAQRVAIARAICI
                     NPKYILFDEAISSLDMSIQTQILDLLIHLRETRQLSYIFITHDIQAATYLCDQLIIFK
                     NGKIEEQIPTSALHKSDNAYTRELIEKQLSF"
     gene            14160..15353
                     /locus_tag="O6Y56_001834"
     CDS             14160..15353
                     /locus_tag="O6Y56_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5575084.1"
                     /translation="MKGAMAWPFLRLYILTLMFFSANAILNVFIPLRGHDLGATNTVI
                     GIVMGAYMLTAMVFRPWAGQIIARVGPIKVLRIILIINAIALIIYGFTGLEGYFVARV
                     MQGVCTAFFSMSLQLGIIDALPEEHRSEGVSLYSLFSTIPNLIGPLVAVGIWNANNIS
                     LFAIVIIFIALTTTFFGYRVTFAEQEPDTSDKIEKMPFNAVTVFAQFFKNKELLNSGI
                     IMIVASIVFGAVSTFVPLYTVSLGFANAGIFLTIQAIAVVAARFYLRKYIPSDGMWHP
                     KYMVSVLSLLVIASFVVAFGPQVGAIIFYGSAILIGMTQAMVYPTLTSYLSFVLPKVG
                     RNMLLGLFIACADLGISLGGALMGPISDLVGFKWMYLICGMLVIVIMIMSLLKKPTPR
                     PANSL"
BASE COUNT         5414 a         2318 c         2977 g         4743 t
ORIGIN      
        1 aagcataata ccgaagaacc caataacatc aaatctgtac atttcacaaa cttggaaaca
       61 agtcctatgg gaagtgcagt gattaaagga tacatcaatg aaaataaaga agatgatttt
      121 gttgcctatt ctaccccgga aaatgacttt caatttagtg gtgatttaat taaaagtgaa
      181 agattaagtg aattactaaa accagcacat gaaagaaaat caccagatga tataaaaaaa
      241 gaactaaata aaaagaagag tcactaaagt taggagttac tttaatgtcc aaaaaacacg
      301 gttttataat tattggtgtt gttttatgcg tatgtatgct tattgcaggt atccatttta
      361 aaatgaaata tgacgaaaaa gaaaaacaaa aggcaattta ttataaagaa caacaagagc
      421 gcattacact ttatctcaag cataatacta tagaaccgaa cacgatcaaa tctgtacatt
      481 tcactaactt ggaaacaagt cctatgggaa gtgctgtgat tgaaggatac ataaacgaaa
      541 acaaaaaaga tgattttgtt gcttatgcta cacctgaaca taattatcaa tttggtggcg
      601 ctatgataaa aagtgaagga gtagataaat tattaaaacc agcacatgaa agaaagtcac
      661 ctgatgatat aaaaaagaac taaataaaaa gaagaatcac taaaatttgg agatggttta
      721 atgaccaaaa aacatgtttt tataattatt ggtgttattt tatgtatatg tatagtcgct
      781 acggtcatac attttaaaat gaaatatgat gaaaaagaaa aacaaaaagc aatttattat
      841 aaagaacaac aagagcgcat tacactttat ctcaagcata ataccaaaga atccaatacc
      901 atcaaatctg tacatttcac aagtttaaaa agaggaccta tgggagatgc agtaattgaa
      961 ggttacatca atgaaaacaa aaaagatgat tttgttgcat atgggtctcc agaacataat
     1021 tatcaatttg gtggagatat gatagaaagt gaaaaattaa gtgaattact aaaaccagca
     1081 aatcaattaa aatcaccaga aaaaatcaaa gaagaattag ataaaaaaga aggccactag
     1141 ggtcttcttt atttttgatt taatcttcca ataatctatt tcattgctat cgaaggtgtt
     1201 tcgcaattaa tatcaatcac ctcatcatca ccaatacttc gccagttttt tacagtacat
     1261 taacacaagt aaaccccatt aatgtaaatg aaataatagt ttgaccatta taaaaacatt
     1321 atataccgaa taacaatggc gatgacgtga tttattgaca ttatcaaatt ttctcaaatg
     1381 tgtgtgattt tttataaaaa agggtagagc aaggtataat atcctttcaa tctgttttca
     1441 tattttatat attttttaaa tataagcgct aaatgtttta actaaagcac agattgacaa
     1501 gatgttatac agaatttcaa attctatcaa atattgttcg aagtgtagta tcactggatt
     1561 gatattaaac aatgtaaaga aggagagatt gcaaatgccg tataattaca agaaacaaaa
     1621 tggagagtta atgtctgtaa tgagccaagg tgaaaagttt attcatcaat cacccgttaa
     1681 tgatgaactt agtgcattga ttaagttatt aatttctaaa attaacggtt gtcattattg
     1741 tgttgatatc cataaaaaag aattaaagga attgggtgta acgcaaatga aaattgatga
     1801 agtcttgagt tttagacatt tagatttatt tactgatcaa gaaaaagtga cgcttgaatt
     1861 tgcagaaatg ttaaattcaa tcaaagactt taagaagttt gaaattattg accggctaaa
     1921 atcattttat gatgaagaac aaattattga tcttgtcttt gttgtaaacc aaattaacgg
     1981 ttggaacaga ctaaatatta ttagtgataa actataattg ttcatataaa tacagagttt
     2041 catctcgaac gctatatcat aacaaatcat gccactatac aggtcaaatc atgtatagtg
     2101 gcattttaat ttatcccctt gagtgctgtt atttaacgaa tatcggtcca cctggtccaa
     2161 cagggatacc taataagaac caaataatga caaatactgt ccacacaata cttagcgcga
     2221 ttgaatacgg cattaaacta gaaagtaagg ctccgagttt catgcgttta tcgtattttt
     2281 gtgcataagt taatagtaaa ggtaagtacg gcatcatcgg tgtaattgga ttggtaattg
     2341 aatctcctac acggtaaatg acttgtgtaa atgcggggtg aaagccgata aggattaaca
     2401 ttggtacgaa tatcggtcct aaaatacccc atttagccga tgcgcttccg attaacatgt
     2461 tgaccattgc actcagtaca ataataccta gtatcaatac aataccgttt tgatgttcta
     2521 ataatttggc acctttaaca gcagcgataa ttcctaaatt actccacttt aaatatgcaa
     2581 gtagctgtgc tgcaaaaaac acaataacga taaatgttcc cattgatcct acagcatcgc
     2641 cgaacatttt acctaagtct tttgtatttt taatttcttt gcttaaaatc ccataaacta
     2701 atccaggtac taaaaataca acaagaataa ttaatccgac accgttaatt aatggcgcat
     2761 cgtctagtaa gctgcctgtt ttagcatttc ttaaaaagct atgttcagga atagctgtaa
     2821 taattaataa aataattgtg actatgaaac tgatatttgc ccattttaaa gcatgtgctt
     2881 ctttgtcagt aatatgtgaa gacgtttctt catgatcatc atgcattaaa cgatcatcat
     2941 attgacctaa cctaggaata atcagtttag ttgtaactag caatatcgta ggaagtaata
     3001 caacgacact cgctgcgata aagtaccagt tcatagcaac gtttgtttta atagattctg
     3061 aaacgatacg tgttgctggt tctgtaaatg aatagaccaa agcatcttgc ataccaacaa
     3121 ctatatttgc ggcaaagcca cctacagcgg aagcatatgc catcgttagt ccagcgatag
     3181 ggtgatagcc aattttaata aaaagcatcg ctgcgagcgg cggcaagata attgtagcag
     3241 catcgccggc tgtactacct aaaataccaa ttaatataat agtcggtaaa attaagaaac
     3301 gtggtgcgcg attcacaaca gaaatcatta acttgtcgaa gtatcctgtt ttctctgcaa
     3361 caccaatacc aatcatcact gctagtacta agcctaatgc tgggaactct gagaaatttt
     3421 taatcgtatc attcattatc atcgtaaatc catcatggct aattatattt ttaatataaa
     3481 tggtttgatg cgtacctgga tgcttaacag atacattaaa taatgagata acccacgtca
     3541 taatggctaa gcccacacac attaaaaaga ataagacgct aggatctggc aatttatttc
     3601 caattttttc aacactattc aagaaacgat tgacgataga ccccttttgt tgatgttttg
     3661 atgtcatcaa tgattccccc ctttgttaaa tatttaaagt gtaacaaaaa atactctcaa
     3721 aagtaacaat tttcagaaaa tgaaaaatct aatattgtta aatattttga gttattcaat
     3781 agaaattcta tagcagagag tagctaagac tgcctggaga cttagctata aggtttatga
     3841 agcattgaac agtggaaaat aaggactgta agtttaagat atgttgtata ggagtgactg
     3901 aatgaaacgt ttggaaaata aagttgcagt cgtaacagga gcaagtacag gtatcggaca
     3961 agcttctgca atcgctttag ctcaagaagg tgcgtatgta ttggcggtag acatagctga
     4021 agcggtatcg gagactgtcg ataaaattaa aagtaatggt gacaaagcaa aggcttatgt
     4081 tgtggatatt gcaagcgaac aacaaattga caattttgca tcagaaatta gagaacagtt
     4141 tgggcatgtt gatgtgttat ttaataatgc cggtgtggat aatgcggctg gtagaattca
     4201 tgagtatcca acagacgtat atgacaagat tatgaatgta gatatgcgtg ggacattttt
     4261 aatgacgaaa atgatgttac ctttaatgat gactaaaggt ggctctattg ttaacacatc
     4321 ttcattttca ggacaggcag cagatttgta tcgctcagga tataatgctg cgaaaggggc
     4381 agtgattaat tttactaaat ccattgcaat agaatatggt agagatggca ttcgagctaa
     4441 tgcaattgca ccaggtacga ttgaaacccc gttagtagat aaactgacag gtactagcga
     4501 agataaggaa ggcgaagcat tcagagaaaa tcagaaatgg atgacaccgc tgggacgttt
     4561 aggtaaacca gaagaagtag gcaagctcgt tgtcttttta gcatctgatg agagttcatt
     4621 tattactggt gaaacaattc gcattgacgg tggtgttatg gattacacat ggcctggcga
     4681 gatgttgagt gatgattcgt ggaagcggac attggaataa ttgttttaaa atcgatatcc
     4741 agcggaaaat aatttggcat gaagtaggca atgtatgcat attgtcacaa tgacaggcat
     4801 atgaagcgga gattaattaa tctttgaaaa tcacatattg ttcatttgaa gtgtattgct
     4861 taaggctagt tttaacgtat tgtaggtcgt gcatctaatt tatcagaatc tcgagttcga
     4921 acttttggag tatctttaaa ataagttgta ttttgtctat tctaataaat taaggagaat
     4981 tttatgttaa aagaaaaaga aagttttaga ttgctatatc aagctataag agagattgca
     5041 gataaaattg gaggtaatca gttagaaact aattccgtta gtttattatt attggacttt
     5101 gattttgaac atgaagtatt tgatgaattg catcttgcga ttttaaaata tttaaataca
     5161 gtaagtatag agaacataag tcatagtgag cttttgaatt taataggaaa tacgattcca
     5221 gaagatcgag agattaacac gtttgtaaaa aataaaataa taattggctt tgctaataat
     5281 tatttccctg aattacaagt attagcaaac gaaataaaat ctgatatggc tagttcatta
     5341 aaataatgat atttttattt gaatttttaa agctttgtac gaaattgtac aaagcttttt
     5401 tggtgcgcat tgcatgggta acaacttgac gatgaaaatc cgttacagga ttggtaatag
     5461 gaaatgttag cgaaagacaa gggtatccat tgtagattaa caaaaggacg tttccactag
     5521 tgtgggttat tctcactaaa ccaatacgca gagacaactt acgtaaaatt ttgaactgac
     5581 gagaacggaa cttctactca attattgata aaaattttca aaaagacttg aatgtgctga
     5641 gaatacgatg tttatggagg gattcacaaa ttataaatga gcattcattt acaaccttta
     5701 ttgacaatga ttctcaacta atatagtata taatcaaatc gtaatagtta cgatttgttt
     5761 tctgcaactt ttttgaagtt ttagttgagg tgaaaactgt aaaagcatct aagtgaatgt
     5821 agttaacgga caactgcatt cgcttgtaga gccacaagaa gcaactttaa ataaggttta
     5881 cggttgcatg ttgatgcaac aaccgattac taagtcatgc tttccacttt gcggattagc
     5941 atgacttacc taataaatgg gaaactatta ggttcatctt ctaaaaaatt acaggtatag
     6001 aggaatacag ttgtttgctt cgcaacaact gcataagagc ctatagtaat taaaattaca
     6061 gaggctctaa aaaatacatc taaaggagtg tcgtatgaat cggcaggtta tagaattttc
     6121 taagtataat ccttcgggga atatgacgat acttgttcat tcaaaacatg atgctagtga
     6181 atatgcatct atcgccaatc agttgatggc cgcaacacat gtatgttgtg aacaggtagg
     6241 ctttatagaa tcaacacaaa atgatgatgg caatgatttt cacttagtca tgagcggtaa
     6301 tgaattttgc ggtaatgcga cgatgtcata tatacatcat ttgcaggaaa gtcatttgct
     6361 taaagaccaa cagtttaagg tgaaggtatc tggctgttcg gatttagtgc aatgtgcaat
     6421 tcatgattgc caatactatg aagttcaaat gccacaagcc catcgtgttg tgccaacaac
     6481 aattaatatg ggtaatcatt catggaaagc aatagaaatt atttatgaaa catatgtaca
     6541 ttatgtgatt ccagttaatc aagtaacaac agaaattcaa catttggttg aaacatatgt
     6601 gcgtgagcaa caatggaatc acaaatataa aacagtaggt atgatgcttt ttgatgaaca
     6661 acgtcaattt ttacagccat taatctatat accagaaata caaagtttaa tttgggaaaa
     6721 tagctgtggt tctggtacag catcaattgg ggtttttaat aattatcaac gtaatgacgc
     6781 atgcaaagat tttacagtac atcagccagg gggcagtatt ttagtgacat caaagcgatg
     6841 tcatcaattg ggatatcaaa cttcaattaa aggacaggtt acaactgtag ctacaggaaa
     6901 agcatatata gaataaggag cctacaatga ataactttaa taatgaaatc aaattgatat
     6961 tacaacaata tttagaaaag tttgaagcgc attacgagcg tgtattacaa gacgatcaat
     7021 atatcgaagc attagaaaca ttgatggacg actatagtga atttatttta aatcctattt
     7081 atgaacaaca atttaatgct tggcgtgacg ttgaagaaaa agcacaatta ataaaatcac
     7141 tgcaatatat tacagcgcag tgtgttaaac aagtggaagt cattagagct agacgtctat
     7201 tagacggaca ggcgtctacc acaggttact ttgacaatat agaacactgt attgatgaag
     7261 agtttggaca atgtagtata gctagccatg acaaattatt gttagttggt tcaggtgcat
     7321 atccaatgac gttaattcaa gtagcaaaag aaacaggtgc ttcagttatc ggtattgata
     7381 ttgatccaca agccgttgac ctaggacgca gaatcgttaa cgtcttagca ccaaatgaag
     7441 atataacaat tacggatcaa aaggtatctg aacttaaaga tatcaaagat gtgacgcata
     7501 tcatattcag ctcgacaatt cctttaaagt acagcatttt agaagaatta tatgatttaa
     7561 caaatgaaaa tgtcgtagtt gcaatgcgtt ttggtgatgg catcaaagca atatttaatt
     7621 atccgtcaca agaaacagcg gaagataagt ggcaatgtgt gaataaacat atgagaccac
     7681 agcaaatttt tgatatagca ctttataaaa aagcagctat aaaggtaggt attacggatg
     7741 tctaaattat taatgatagg cactggtccg gtcgcaatcc aattagcgaa tatttgctat
     7801 ttaaaatcag attatgagat tgatatggtt ggacgtgcct caacatcaga aaaatcaaaa
     7861 cgcttatatc aagcgtataa aaaagagaaa caatttgaag tcaaaataca aaacgaggcg
     7921 catcaacatc tggaaggtaa gtttgaaatt aatcgtttgt ataaagatgt aaaaaacgtt
     7981 aagggtgaat acgaaacggt tgtcatggca tgcacagcag atgcttatta tgacacacta
     8041 cagcaattgt cgttagaaac tttgcaaagt gtcaaacatg tcattttaat ttcaccgaca
     8101 tttggatcgc aaatgattgt ggaacaattt atgtctaagt tcagtcagga tatcgaagtg
     8161 atttcatttt caacttatct tggcgataca cgtattgttg ataaagaagc acctaatcat
     8221 gtgttgacaa caggtgtaaa aaagaaattg tacatgggat cgacacattc aaactcaaca
     8281 atgtgtcaac gaatctctgc tttagctgag cagttgaaga ttcaattaga agtcgttgaa
     8341 tcgccactgc atgctgaaac acgtaacagt tcgctttatg tgcacccacc actatttatg
     8401 aatgactttt cattgaaagc cattttcgaa ggaacggatg taccggttta tgtgtataag
     8461 ttatttcctg aaggaccgat aacgatgaca ttaatccgtg aaatgcgttt aatgtggaag
     8521 gaaatgatgg ctattttaca agcatttaga gtgccgtcag tcaacctgct tcaatttatg
     8581 gtgaaggaaa attatccagt acgtcctgaa actttggatg aaggtgatat tgagcatttc
     8641 gaaatcttgc cagatatctt acaagaatat ctgctttatg taagatatac cgcaatcctt
     8701 attgatccat tttcacagcc agacgaaaac ggacattact ttgatttttc agctgtacca
     8761 tttaagcaag tctataaaaa tgaacaggat gttgttcaaa ttccaagaat gccaagtgag
     8821 gattattaca gaacagcgat gattcagcat attgggaaaa tgctaggtat ccaaacgcca
     8881 atgattgatc agttcctaac tcgctatgaa gcaagttgcc aggcatacaa ggatatgcat
     8941 caagatcaac acttatcttc tcaatttaat acaaatttat ttgaagaaga taaagcactc
     9001 gtcacaaaat ttttggaaat caatagaacg ctttcataat aagggtttga agttttataa
     9061 tagaaaaaaa ttattgaatt atgtttgaca tttacataaa aataagcaaa taattgagaa
     9121 aaataatcat tacgatttga ttaagtaatg caacttatca atttagaaag aggaaaagca
     9181 aatgagaaaa ctaactaaaa tgagtgcaat gttacttgca tcagggctaa ttttaactgg
     9241 ttgtggcggt aataaaggtt tagaggagaa aaaagaaaac aagcaattaa cgtatacgac
     9301 ggttaaagat atcggggata tgaacccgca tgtttacggt ggatcgatgt ctgctgaaag
     9361 tatgatatac gagccgcttg tacgtaacac gaaagatggg attaagcctt tattagctaa
     9421 aaaatgggat gtgtctgaag atgggaaaac atacacgttc catttgagag atgacgttaa
     9481 attccatgat ggtacgccat ttgatgctga cgcagttaag aaaaatattg acgcagttca
     9541 agaaaacaaa aaattgcatt cttggttaaa gatttcaaca ttaattgaca atgttaaagt
     9601 taaagataag tacacggttg aattgaattt gaaagaagca tatcaacctg cattggctga
     9661 attagcgatg cctcgtccat atgtatttgt gtctccaaaa gactttaaaa acggcacaac
     9721 aaaagatggc gttaaaaagt tcgatggtac tggtccattt aaattaggtg aacacaaaaa
     9781 agatgagtct gcagacttta acaaaaatga tcaatactgg ggcgaaaagc ctaaacttaa
     9841 caaagtacaa gcaaaagtaa tgcctgctgg tgaaacagca ttcctatcaa tgaaaaaagg
     9901 tgaaacgaac tttgccttca cagatgatag aggtacagat agcttagaca aagactcttt
     9961 aaaacaattg aaagatactg gtgactatca agttaagcgt agtcaaccta tgaatacgaa
    10021 aatgttagtt gtcaattctg gtaaaaaaga taacgctgtc agtgacaaaa cagtcagaca
    10081 agcgattggt catatggtaa acagagataa aattgccaaa gaaattttag atggtcaaga
    10141 aaaaccagca actcaattat ttgcgaaaaa tgtaacagac attaatttcg atatgccaac
    10201 acgtaagtat gaccttaaaa aagcagaatc attattagat gaagctggtt ggaagaaagg
    10261 taaagacagc gatgttcgtc aaaaagatgg taaaaacctt gaaatggcaa tgtactatga
    10321 caaaggttct tcaagtcaaa aagaacaagc agaatactta caagcagaat ttaagaaaat
    10381 gggtattaag ttaaacatca atggcgaaac atcagataaa attgctgaac gtcgtacttc
    10441 tggtgattat gacttaatgt tcaaccaaac ttggggatta ttgtacgatc cacaaagtac
    10501 tattgcagca tttaaagcga aaaatggtta tgaaagtgca acatcaggca ttgaaaacaa
    10561 agataaaata tacaacagca ttgatgacgc atttaagatc caaaacggta aagagcgttc
    10621 agacgcttat aaaaacattt tgaaacaaat tgatgatgaa ggtatcttta tccctatttc
    10681 acacggtagt atgacagttg ttgcgccgaa agatttagaa aaagtatcat tcacacaatc
    10741 acagtacgaa ttaccattca atgaaatgca gtataaataa aggagcgttt agatgttcaa
    10801 atttatctta aaacgtattg cgctcatgtt tccattgatg attgtagtaa gttttatgac
    10861 atttctattg acgtatatta caaatgaaaa tccagctgtg acaattttac atgcacaagg
    10921 aacgccaaat gtaacaccag agttgattgc agaaacgaat gagaagtacg gtttcaatga
    10981 tccattatta attcaatata aaaattggtt acttgaagcg atgcaattta attttggtac
    11041 aagctacatt acaggtgatc ctgttgctga acgcattggt ccagcattta tgaatacatt
    11101 gaaattaaca ataatttcaa gtgttatggt gatgattaca tcaattattt taggtgtagt
    11161 tagtgcatta aaaagaggaa agttcactga tcgtgcgata cgttcagtgg ctttctttct
    11221 aactgcatta ccatcatatt ggatagcttc aatacttatt atttacgttt cagtgaagtt
    11281 aaacatattg ccgacttctg gattaacagg tccagaaagt tacatattgc cagtgatcgt
    11341 tattacgatt gcctatgctg gtatttactt tagaaatgtt agacgctcga tggtggaaca
    11401 attaaatgaa gattatgtac tttatttaag agcaagcggt gtgaaatcta tcacattaat
    11461 gttgcatgtg ttgcgtaatg ctttacaagt tgcggtatca atcttttgta tgtctatacc
    11521 aatgataatg ggtggactag ttgttatcga gtatatcttt gcatggcctg gactaggtca
    11581 attaagttta aaagcaatac ttgaacatga ttttccagtc attcaagcat atgtattaat
    11641 tgtagcggta ttatttattg tatttaatac attagcagat atcattaatg cgctattaaa
    11701 tccacgatta agggagggcg cacgatgata attttaaaac gattattaca agataaaggt
    11761 gcagtgattg ctttaggcat tattgtatta tatgtctttt taggattagc agcaccactt
    11821 gtgacatttt atgatcctaa ccatattgat acagcaaaca aatttgctgg catgagtttt
    11881 caacatctac taggtacgga ccatttaggt agagatattt taactaggtt aatttatgcg
    11941 attagaccaa gtttgttata tgtctttgtt gcgctatttg tttctgtact tattgggtct
    12001 attttaggat tcttatcagg atatttccaa gggtttgttg acgccttaat catgcgtgcg
    12061 tgtgatgtta tgttggcatt cccaagttat gttgtaacgt tagcattgat tgcattgttt
    12121 ggtatgggtg ccgaaaatat tatcatggca tttattttga cgcgttgggc atggttctgt
    12181 cgtgttatac gtacaagtgt tatgcagtac actgcttctg accatgtaag atttgctaaa
    12241 acaatcggta tgaatgatat gaaaattatt cacaaacata ttatgccgtt aacattagca
    12301 gatattgcta tcatttctag tagttcgatg tgttcaatga tcttgcaaat atctggcttt
    12361 tcatttttag gattaggtgt caaagcgcct actgcagagt ggggtatgat gcttaacgaa
    12421 gctagaaaag tgatgtttac acatcctgaa atgatgtttg cgccaggtat tgccatagtg
    12481 attatagtga tggcatttaa cttcttatcc gatgctttac aaattgccat tgatccccgc
    12541 atttcttcta aagataaact tcgttctgtg aaaaaaggag tggtgcaatc atgacattgt
    12601 taacagttaa gcatttgacg attacagata cctggacgga tcaaccactc gtgagtgatg
    12661 tgaattttac attaactaag ggtgaaactt taggcgttat tggagaaagt ggtagcggta
    12721 aatcaattac atgcaaatcg attgtaggtt taaatccaga acgattacgc gtaacaggtg
    12781 atataacctt tgatggtaag ccaatgttgt cgttatcgga agcacaattg aaaaaatacc
    12841 gtggtaaaga tattgcgatg gtcatgcaac aaggtagtcg tgcctttgac ccatcaacta
    12901 ctgtcggtaa acaaatgttt gagactatga aagtacatac gtcaatgtct acacaagaaa
    12961 ttgaaaagac attgattgaa tatatggatt atttaagttt gaaagatccc aaacgtatat
    13021 taaaatcata tccttacatg ttatcaggag gaatgttaca gcgattgatg attgctttag
    13081 cgttagcttt gaaaccaaag ttaatcattg ctgatgagcc gacaacggct ttagatacaa
    13141 ttacacaata tgatgtactg gaagcattta tagatattaa aaaacacttt gactgtgcga
    13201 tgattttcat ttcacatgat ttaacggtta ttaacaagat tgcagaccgt gttgttgtga
    13261 tgaaaaatgg tcaactgatt gagcatggta cgcgtgaatc agtcttgcat catccagaac
    13321 atgtttatac gaagtattta ttatccacta agaagaagat taatgatcat tttaaacatg
    13381 tgatgagggg tgatgtacat gattaaaatt aaagatgttg aaaagtcata tcaaagcgca
    13441 catgttttta agcgtcgtcg aacacctatc gtgaaaggtg tgtcatttga gtgtccaatc
    13501 ggtgcgacga ttgcgattat cggagaaagt ggtagcggta aatcgacatt gagtcgtatg
    13561 atattaggta ttgagaaacc ggataaaggc tgtgtaacct taaatgatca accgatgcat
    13621 aagaagaaag tgagacgtca tcaaattggt gcggtatttc aagattatac gtcatcatta
    13681 cacccatttc agactgttag agagatctta tttgaagtga tgtgtcaatg tgatggacaa
    13741 cctaaagatg ttatggaagt ccaagcaatt acattgttgg aagaagtcgg tctatctaag
    13801 gcatacatgg ataaataccc taatatgtta tcaggtggag aggcacagcg tgttgcgatt
    13861 gcgcgcgcaa tatgtattaa ccctaaatat attttgtttg atgaagccat tagttcactc
    13921 gacatgtcaa ttcaaacaca aatattagat ttattgattc atttacgtga aacgcgtcag
    13981 ttgagttata tttttatcac acatgatatt caagctgcca cgtatttatg tgatcaatta
    14041 attattttta aaaacggaaa aatagaagaa caaattccga caagcgcatt gcataaaagt
    14101 gacaatgctt atacaagaga attaatagaa aaacaactat cattctaagg agtgagataa
    14161 tgaaaggtgc aatggcttgg ccctttttga gattatatat attaacattg atgttcttta
    14221 gtgccaatgc aatcttaaac gtgtttatac ctttacgagg gcatgattta ggcgcaacga
    14281 atacggttat cggtatcgtt atgggggcat acatgttaac agcaatggta tttcgaccat
    14341 gggcaggaca aattattgct cgtgtcggtc ccattaaagt attaagaatt attttgatta
    14401 tcaatgccat agctttaatt atttatggtt ttactggctt agaaggttat ttcgtagcac
    14461 gtgttatgca aggtgtgtgt acggcattct tttctatgtc tttacagcta ggtattattg
    14521 atgcattacc agaggaacat cgttctgaag gtgtatcatt gtactcgcta ttttcaacga
    14581 ttccaaactt aatcggacca ttagttgccg taggtatttg gaatgcaaat aatatttcac
    14641 tatttgcaat tgtcattatc tttatcgcat taacaacaac attctttggc tatcgcgtga
    14701 cctttgctga acaggaaccc gatacgtcag ataagattga aaaaatgccg tttaacgctg
    14761 taactgtttt tgcgcaattt ttcaaaaata aagagttgtt gaacagtggt attatcatga
    14821 ttgttgcatc gattgtattt ggtgcagtta gtacatttgt accgttatac acagtgagtt
    14881 taggattcgc gaatgcggga atctttttga caatacaggc catcgcagtt gttgcggcaa
    14941 gattttactt aaggaaatac attccgtcag atggtatgtg gcatcctaaa tatatggtat
    15001 ctgtactatc attattagtg atcgcgtcat ttgtagtggc atttggtccg caagtaggtg
    15061 caattatttt ctatggtagt gcaatattaa taggaatgac acaagcaatg gtgtatccaa
    15121 cattaacatc atacttaagt ttcgtcttac caaaagtagg tcgtaatatg ttgttaggtt
    15181 tatttattgc ctgtgcagac ttaggtatat cgttaggtgg cgcattgatg ggacctattt
    15241 ccgatttagt aggatttaaa tggatgtatc taatttgtgg tatgttagtc attgtaataa
    15301 tgattatgag tttattgaaa aaaccaacac cacgcccagc aaatagtctt taatgaagtg
    15361 aattaaagca tattaagtta ataaatattt aaattttaaa aggtatattg agcatggcga
    15421 ttcatgggag tgggacagaa atgatatttt cg
//
LOCUS       DALMNS010000072        15240 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.072, whole genome shotgun sequence.
ACCESSION   DALMNS010000072 DALMNS010000000
VERSION     DALMNS010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 15240)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15240)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15240
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.072"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(37..1581)
                     /gene="pruA"
                     /locus_tag="O6Y56_001835"
     CDS             complement(37..1581)
                     /gene="pruA"
                     /locus_tag="O6Y56_001835"
                     /EC_number="1.2.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamate gamma-semialdehyde dehydrogenase"
                     /protein_id="HDB5575085.1"
                     /translation="MVVEFKNEPGYDFSVQENVDMFKKALKDVEKELGQDIPLVINGE
                     KIFKDDKIKSINPADTSQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELML
                     RVSAIIRRRKAEIAAIMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDR
                     EGEHNKYFYKSIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLM
                     EILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEG
                     QNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYD
                     EVLEKSIKLTKELTLGNTVDNTYMGPVINKKQFDKIKNYIEIGKEEGKLEQGGGTDDS
                     KGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITN
                     NREHWIKAVNEFDVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAKTGSPDYLLHFLEQK
                     VVSEMF"
     gene            complement(1772..2371)
                     /locus_tag="O6Y56_001836"
     CDS             complement(1772..2371)
                     /locus_tag="O6Y56_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000136499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar O-acetyltransferase"
                     /protein_id="HDB5575086.1"
                     /translation="MTEKEKMLAEKWYDANFDQDLINERARAKDICFELNHTRPSDTN
                     KRKELIDQLFQTTTDNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGGQITIGDNVF
                     IGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAG
                     SVVTKDIPPHSLAVGNPCKVVRKIDNEVPSEALNDETLY"
     gene            2610..2801
                     /gene="cwrA"
                     /locus_tag="O6Y56_001837"
     CDS             2610..2801
                     /gene="cwrA"
                     /locus_tag="O6Y56_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall inhibition responsive protein CwrA"
                     /protein_id="HDB5575087.1"
                     /translation="MRILITGTVAILIILGLVKTIQDYEMTNDTSRQLSDNKDDDKVI
                     HLNNFKNLHAKEFNPSDFF"
     gene            3041..5449
                     /locus_tag="O6Y56_001838"
     CDS             3041..5449
                     /locus_tag="O6Y56_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HDB5575088.1"
                     /translation="MANTKKTTLDITGMTCAACSNRIEKKLNKLDDVNAQVNLTTEKA
                     TVEYNPDQHDVQEFINTIQHLGYGVAVETVELDITGMTCAACSSRIEKVLNKMDGVQN
                     ATVNLTTEQAKVDYYPEETDADKLVTRIQKLGYDASIKDNNKDQTSRKAEALQHKLIK
                     LIISAVLSLPLLMLMFAHLFNMHIPALFTNPWFQFILATPVQFIIGWQFYVGAYKNLR
                     NGGANMDVLVAVGTSAAYFYSIYEMVRWLNGSTTQPHLYFETSAVLITLILFGKYLEA
                     RAKSQTTNALGELLSLQAKEARILKDGNELMIPLNEVHVGDTLIVKPGEKIPVDGKII
                     KGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVE
                     EAQSSKAPIQRLADIISGYFVPIVVGIALLTFIVWITLVTPGTFEPALVASISVLVIA
                     CPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDTIVLDKTGTITNGRPVVT
                     DYHGDDQTLQLLATAEKDSEHPLAEAIVNYAKEKQLTLTETTTFKAVPGHGIEATIDH
                     HHILVGNRKLMADNDISLPNHISDDLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDH
                     AKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQIAKLQQQG
                     KKVAMVGDGVNDAPALVKADIGIAIGTGTEVAIEAADITILGGDLMLIPKAIYASKAT
                     IRNIRQNLFWAFGYNIAGIPIAALGLLAPWVAGAAMALSSVSVVTNALRLKNMRLEPR
                     RKDA"
     gene            5789..5995
                     /gene="copZ"
                     /locus_tag="O6Y56_001839"
     CDS             5789..5995
                     /gene="copZ"
                     /locus_tag="O6Y56_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone CopZ"
                     /protein_id="HDB5575089.1"
                     /translation="MSQEILNVEGMSCGHCKSAVESALNNIDGVTSAEVNLENGQVSV
                     QYDDSKVAVSQMKDAIEDQGYDVV"
     gene            complement(6085..7083)
                     /locus_tag="O6Y56_001840"
     CDS             complement(6085..7083)
                     /locus_tag="O6Y56_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HDB5575090.1"
                     /translation="MTKIKIMSVRDEDMPYIKAWAEKHHVEVDITKEALTDDNVEDVA
                     SYDGLSLSQQIPLSEHVYKRLNELGIKQIAQRSAGFDTYDLELANKYNLIVSNVPSYS
                     PNSIAEFAVTQAINVVRHFNQIQTKVREHDFRWEPTILSKSIKDLKVAVIGTGRIGRV
                     VADIFANGYQSDVVAYDPFPNAKIATYVDYKDTIEEAVEGADIVTLHVPATKYNHYLF
                     NAELFKHFKKGAVFVNCARGSLVDTKALLDALDNGVIKGAALDTYEFERKLFPSDQRG
                     KTLNDPLLESLIDREDVILTPHIAFYTEAAVENLIVDALDATLDVLQTGDTRLRVN"
     gene            complement(7106..8260)
                     /locus_tag="O6Y56_001841"
     CDS             complement(7106..8260)
                     /locus_tag="O6Y56_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDB5575091.1"
                     /translation="MISNKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDGPTPQG
                     IIDHFQKALTIPENQKYGAFHGKEMFKQAIVDFYQRQYDVTLDKEDEVCILYGTKNGL
                     VAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIID
                     KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKDTDTKIVHDFAYGAFGFDAKNPSILAS
                     ENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIY
                     ALNHYDDFLEEQSNVFKARRDRFEAMLAKADLPFVHAKGGIYVWLETPPGYDSEQFEQ
                     FLVKEKSILVAPGKPFGENGNRYVRISLALDDQQLDEAAIRLTELAYLYE"
     gene            complement(8687..10195)
                     /locus_tag="O6Y56_001842"
     CDS             complement(8687..10195)
                     /locus_tag="O6Y56_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDB5575092.1"
                     /translation="MKIAVIGAGVTGLAAAARIASQGHEVTIFEKNNNVGGRMNQLKK
                     DGFTFDMGPTIVMMPDVYKDVFTMCGKNYEDYIELRQLRYIYDVYFDRDDRITVPTDL
                     AELQHMLESIEPGSTHGFMSFLTDVYKKYEIARRYFLERTYRKPSDFYNMTSLVQGAK
                     LKTLNHADQLIEHYIDNEKIQKLLAFQTLYIGIDPKRGPSLYSIIPMIEMMFGVHFIK
                     GGMYGMAQGLAQLNKDLGVNLELNAEIEQIIIDPKFKRADAIKVNGDIRKFDKILCTA
                     DFPSVAESLMPDFAPIKKYPPHKIADLDYSCSAFLMYIGIDIDVTDQVRLHNVIFSDD
                     FRGNIEEIFEGRLSYDPSIYVYIPAVADKSLAPEGKTGIYVLMPTPELKTGSGIDWSD
                     EALTQQIKEIIYRKLATIEVFEDIKSHIVSETIFTPNDFEQTYHAKFGSAFGLMPTLA
                     QSNYYRPQNVSRDYKDLYFAGASTHPGAGVPIVLTSAKITVDEMIKDIEQGV"
     gene            complement(10207..11070)
                     /locus_tag="O6Y56_001843"
     CDS             complement(10207..11070)
                     /locus_tag="O6Y56_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytoene/squalene synthase family protein"
                     /protein_id="HDB5575093.1"
                     /translation="MTMMAMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVC
                     RKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQ
                     SFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRL
                     GESLQLINILRDVGEDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAI
                     AEKDFRDVMDQIKVFSIEAQPIIELAARIYIEILDEVRQANYTLHERVFVDKRKKAKL
                     FHEINSKYHRI"
     gene            complement(11107..12234)
                     /gene="crtQ"
                     /locus_tag="O6Y56_001844"
     CDS             complement(11107..12234)
                     /gene="crtQ"
                     /locus_tag="O6Y56_001844"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,4'-diaponeurosporenoate glycosyltransferase"
                     /protein_id="HDB5575094.1"
                     /translation="MKWLSRILTVIVTMSMACGALIFNRRHQLKAKTRNFNHKSLTII
                     IPARNEEKRIGHLLHSIIQQQVPVDVIVMNDGSTDDTARVARSYGATVVDVVDDADGK
                     WYGKSHACYQGMTHACTNRIAFVDADVTFLRKDAVETLINQYQLQGEKGLLSVQPYHI
                     TKRFYEGFSAIFNLMTVVGMNVFSTLDDGRTNQHAFGPVTLTNKEDYYATGGHKSANR
                     HIIEGFALGSAYTSQSLPVTVYEGFPFVAFRMYQEGFQSLQEGWTKHLSTGAGGTKPK
                     IMAAIVLWLFGSIASILGLCLSLKYRQMSVGKMLTVYLSYTTQFIYLHRRVGQFSNLL
                     MVCHPLLFMFFTKIFIQSWKQTHRYGVVEWKGRQYSISKEQ"
     gene            complement(12240..13733)
                     /locus_tag="O6Y56_001845"
     CDS             complement(12240..13733)
                     /locus_tag="O6Y56_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDB5575095.1"
                     /translation="MTKHIIVIGGGLGGISAAIRMAQSGYSVSLYEQNNHIGGKVNRH
                     ESDGFGFDLGPSILTMPYIFEKLFEYSKKQMSDYVTIKRLPHQWRSFFPDGTTIDLYE
                     GIKETGQHNAILSKKDIEELQNYLNYTRRIDRITEKGYFNYGLDTLSQIIKFHGPLNA
                     LINYDYVHTMQQAIDKRISNPYLRQMLGYFIKYVGSSSYDAPAVLSMLFHMQQEQGLW
                     YVEGGIHHLANALEKLAREEGVTIHTGTRVDNIKTYQRRVTGVRLDTGEFVKADYIIS
                     NMEVIPTYKYLLHLGTQRLNKLEREFEPASSGYVMHLGIACQYPQLAHHNFFFTENAY
                     LNYQQVFHEKVLPDDPTIYLVNTNKTDHTQAPVGYENIKVLPHIPYIQDQPFTTEDYA
                     KFRDKILDKLEKMGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIYGVVADKKKNKGFK
                     FPKESQYFENLYFVGGSVNPGGGMPMVTLSGQQVADKINAREAKNRK"
     gene            complement(13726..14214)
                     /gene="crtO"
                     /locus_tag="O6Y56_001846"
     CDS             complement(13726..14214)
                     /gene="crtO"
                     /locus_tag="O6Y56_001846"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl-4,4'-diaponeurosporenoate
                     acyltransferase"
                     /protein_id="HDB5575096.1"
                     /translation="MKKYIKTAFFCSMYWLIVQLNIANLGTRIPDKYFRQKHIIFKSF
                     NFEKHGKFWNKWFYVRKWKHKILDGHKLNRNIYDQRHLMTINSDEIEKMIIETKRAEL
                     IHWISILPVIIFNKGPRLVKYINIFYAMIANVPIIIVQRYNRPRLTQLLRILKRRGER
                     HD"
     gene            complement(14389..15156)
                     /locus_tag="O6Y56_001847"
     CDS             complement(14389..15156)
                     /locus_tag="O6Y56_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDB5575097.1"
                     /translation="MKKIVTATIATAGLATIAFAGHDAQAAEQNNNGYNSNDAQSYSY
                     TYTIDAQGNYHYTWTGNWNPSQLTQNNTYYYNNYNTYSYNNASYNNYYNHSYQYNNYT
                     NNSQTATNNYYTGGLGASYSTTSNNVHVTTTAAPSSNGRSISNGYASGSNLYTSGQCT
                     YYVFDRVGGKIGSTWGNASNWASAAASSGYTVNNTPKAGAIMQTTQGYYGHVAYVEGV
                     NSNGSVRVSEMNYGHGAGVVTSRTISANQAGSYNFIH"
BASE COUNT         4733 a         2990 c         2396 g         5121 t
ORIGIN      
        1 caaccgcaat ggatggccct tgttcattat gaagcattag aacatttctg aaacaacctt
       61 ttgttctaag aagtgtaata agtagtctgg gctacctgtt ttagcgtccg tacctgacat
      121 tttgaaacca ccaaatggat ggtatccaac aactgctgaa gtacagcctc tgttaaggta
      181 taaattacct acatcaaatt cgtttaccgc tttaatccaa tgctcacgat tatttgtaat
      241 cactgcacca gttaaaccgt aatctgtatc atttgcaacc tcaattgctt catcaaaatc
      301 gttaactttc acaaagccaa caactggtcc aaaaatttct tcttgcatga ttctatcttt
      361 agatttaagt cctgaaatga ttgttggttc tacaaagtaa ccttttgaat catcagtgcc
      421 gccaccttgt tctaatttac cttcttcttt accaatctcg atataatttt taatcttatc
      481 aaattgtttt ttattaataa ccgggcccat atacgtattg tctacagtat tgcccaacgt
      541 taattctttt gttagtttga ttgacttttc taatacttcg tcataaacgt ctttatgcac
      601 aattgcacgt gaacatgctg aacatttttg accagagaaa ccaaacgctg acgttacaat
      661 agcttctgct gccatatctg tatcaatatt ttcatcaact acaatggcat ctttaccacc
      721 catttcagcg ataacacgtt tcaagaagtt ttgaccttct tgaacaacgg cactacgttc
      781 ataaattcta gtacctgtcg cacgtgaacc tgtaaatgta acgaaatgcg tatctttatg
      841 atcaactaag taatcaccaa tttctttcgg atcgccagga acaaagttaa ctactccttt
      901 tggtaatcct gcttcttcta aaatttccat taatttataa gcgatataag gtgtatcctc
      961 agcaggtttc aataacactg tattacctgc aacaactggt gctaaagtcg taccagccat
     1021 aatcgcaaac gggaagttcc acggtggaat tgtaacacct gtaccaattg atttatagaa
     1081 atatttattg tgttcacctt cacgatcaag tactggctta ccttgagcca aatccatcat
     1141 tgaacgcgca tagtattcaa taaaatcaat accttcagct gcatcaccaa ctgcttcatc
     1201 ccatggttta cctgcttcat aaaccataat tgccgcaatt tccgcttttc gacgacgaat
     1261 aattgccgaa acacgtaaca taagctctgc acgatcattt gctgaccatg ttttccaaga
     1321 tttataagct tcgtttgctg ctttaaatgc atcttcaaca tcttgttttg ttgcctttga
     1381 tgcatttgca atcacttgtg atgtgtctgc aggattgatt gatttaattt tgtcatcttt
     1441 gaaaatcttc tctccattaa tcactaatgg tatgtcttga cctaattctt tttccacgtc
     1501 tttcaatgct ttcttaaaca tatccacatt ttcttggact gaaaaatcgt aaccaggttc
     1561 atttttaaat tctactacca tgtacactta ccccctataa attttgaaag tggtttaacc
     1621 ctttgattta atgatataac atcatttaaa ctcattttac tatgagtaag gtcggttttg
     1681 caatcgcttt catttttctg ctttatacct ttcttctcaa gcattttgaa aatgattagt
     1741 tactttttaa aatttagaag tgtcatgaca actaatatag tgtttcatcg ttcaatgctt
     1801 ctgatggtac ctcattatca attttacgaa cgactttaca aggatttcca accgctaaac
     1861 tgtgtggcgg aatatctttt gtgacaacac tacctgcacc aatcacacta ccttctccaa
     1921 tcgtcacccc tggtaacacg gctacatgac cgccaaacca agtattactg ccaatatgaa
     1981 tgggtccggc tttttcaaaa ccttcatttc tatgatgaaa attaagtgga tgtgttgctg
     2041 tatagaatcc acaattaggt cctataaaaa cattatcgcc aattgtaatc tgtccaccat
     2101 ccataaaata acaattggtg tttacataga cattttttcc tagtttaacg ttccaaccat
     2161 aatctgtatc aaaaggaatc gaaatactta cattgtctgt tgttgtttga aataattgat
     2221 cgattaattc ctttctttta tttgtgtcac tcggtcttgt atgatttaat tcaaagcaaa
     2281 tatctttcgc tcgtgcacgt tcatttatta agtcttgatc aaagtttgca tcgtaccatt
     2341 tttctgctaa cattttttct ttttcagtca ttacaccttt caactcctaa taacttattt
     2401 acttgtttaa aagttaatca aataaacatt cgcctatgca actaatacgc tataacatta
     2461 tgaaatcatg accttatcac ccttatctaa acaattctcg catcaaatac tgctaaagta
     2521 gtagataaat tcaatactac agacgcattc attttttaat ctattaacgt acaatgtgag
     2581 taagagaaat ataaaggagt atgatagcga tgagaatatt aattacaggc acagttgcta
     2641 tcttaatcat tttaggtttg gtcaaaacga tacaagatta cgaaatgaca aacgacacga
     2701 gtcgtcagtt gtcagacaac aaagatgatg ataaagtcat ccatcttaat aattttaaaa
     2761 atttacatgc taaagaattt aacccatctg atttctttta agtcacccaa gaattgcaaa
     2821 tccagaagtc atttaagttt tacctttcat tcatacatcc tttaatatta attacgactt
     2881 cttttatata gatgctaaat agagagattg ttgtgcaatg tttgcacggc aatctctctt
     2941 tttcttttta aaattggtaa aagtaaaacg caacgattga cttatatacc tatagggggt
     3001 acattagacg tgtaacaatg aatcacaggg aggcaataat gtggctaata cgaaaaaaac
     3061 aacattagat atcactggta tgacttgtgc cgcatgttca aatcgtatcg aaaagaaact
     3121 gaataaactt gatgacgtta atgcccaagt gaatttaact acagagaaag caactgttga
     3181 gtataaccct gatcaacatg atgtccaaga atttattaat acgattcaac atttaggtta
     3241 cggtgtcgct gtagaaactg tcgaattaga cattacaggc atgacttgtg ctgcatgctc
     3301 aagccgtatt gaaaaagtgt taaataaaat ggacggcgtt caaaatgcaa cggtcaattt
     3361 aacaacagag caagctaaag ttgactatta tcctgaagaa acagatgctg ataaacttgt
     3421 cactcgcatt caaaaattag gttatgacgc gtctattaaa gataacaata aagatcaaac
     3481 gtcacgcaaa gctgaagcgc tacaacataa attgattaag cttatcatat cagcagtatt
     3541 atctttaccg ctattaatgt taatgtttgc gcatcttttc aatatgcata taccagcact
     3601 atttacgaat ccatggttcc aatttatttt agctacacct gtacaattta ttattggatg
     3661 gcaattttat gtaggtgctt ataaaaactt aagaaatggt ggcgccaata tggatgtact
     3721 tgttgctgtt ggtacaagtg cagcatattt ttacagtatt tatgaaatgg ttcgttggct
     3781 aaatggctca acaacgcaac cgcatttata ctttgaaaca agcgccgtac taattacctt
     3841 aatcttattc ggtaagtatt tagaagctag agcgaagtct caaacaacca atgcgcttgg
     3901 cgaattatta agtttacaag ctaaagaagc acgcatttta aaagacggta atgaattgat
     3961 gattcctcta aatgaagtac atgttggaga tacacttatc gttaaaccag gtgaaaagat
     4021 acctgttgat ggcaaaatta ttaaaggtat gactgccatc gacgaatcta tgttaacagg
     4081 tgaatctatc cctgttgaaa agaatgttga tgacactgta attggttcaa cgatgaacaa
     4141 aaacggtact attactatga cagcaacaaa agttggcggg gacactgcgt tagcaaatat
     4201 tattaaggtt gtcgaagaag ctcaaagttc taaagcgccg attcaacgat tggcagatat
     4261 tatttctggt tatttcgttc ctatcgttgt tggtatcgca ctattaacat ttatcgtgtg
     4321 gattacttta gttacaccag gtacatttga acctgcactt gttgcgagta tttccgttct
     4381 tgtcattgct tgtccatgcg cattaggact tgctacacca acttctatta tggtaggtac
     4441 cggtcgcgct gctgaaaatg gtattttatt taaaggtggc gagtttgttg aacgcacaca
     4501 tcaaattgat accatcgttt tagataagac gggtaccatt acaaatggtc gtccagtcgt
     4561 gacagattat catggtgacg atcaaacgct acaactgctt gctactgctg aaaaagattc
     4621 tgaacaccca ttggcagaag ccattgtcaa ttatgcaaaa gaaaagcaat taacattaac
     4681 tgagacgaca acatttaaag cagtacctgg tcatggaatt gaagcaacga ttgatcatca
     4741 ccatatattg gttggtaacc gtaaattaat ggctgacaat gatattagct tgcctaacca
     4801 tatttctgat gatttaacac attatgaacg agatggtaaa actgctatgc tcattgctgt
     4861 taattattca ttaactggta tcatcgcagt ggcagatact gtaaaagatc atgccaaaga
     4921 tgctataaaa caattgcatg atatgggcat tgaagttgct atgttaactg gcgataataa
     4981 aaacactgct caagccattg caaaacaagt aggcatagat actgttattg cagatatttt
     5041 accagaagaa aaagctgcac aaattgcgaa actacagcaa caaggcaaga aggttgcgat
     5101 ggttggtgac ggtgtaaatg atgcacctgc attagttaaa gctgatatcg gtatcgccat
     5161 tggtacaggt acagaagttg ccattgaagc agctgatatt actattcttg gtggcgactt
     5221 gatgcttatt cctaaagcca tttatgcaag taaagcaacc attcgtaata ttcgtcaaaa
     5281 tctattttgg gcattcggct ataatattgc cggtatccct atagctgcat tgggcttact
     5341 tgcgccatgg gttgctggtg ctgcaatggc actaagttca gtaagtgttg tcacaaacgc
     5401 acttagattg aaaaatatgc gattagaacc acgccgtaaa gatgcctaga ttccttaata
     5461 atgaaggatt cgttggtgat tctgaggtag gctagtgatt ggctctataa tgtcgcggtt
     5521 tacagttgga tcttcgctcc tactgcataa gagcctgaga cataaatcaa tgttctatgc
     5581 tctacaaagt tataatggca gtagttgact gaacgaaaat gcgcttgtaa caagcttttt
     5641 tcaattctag tcaaccttgc cggcggggcc ccaacaaaga gaaattggat tcccaatttc
     5701 tacagacaat gcaagttggg gtgggacgac gaaataaatt ttacgaaaat atcatttctg
     5761 tcccactccc taaaaggagg tgaatgctat gtcacaagaa attttaaatg ttgaaggtat
     5821 gagctgtggt cactgcaaaa gtgctgttga atctgcatta aataatattg acggtgtcac
     5881 ttcagctgaa gttaaccttg aaaatggtca agtaagtgtt caatatgatg acagtaaagt
     5941 tgctgtatct caaatgaaag acgcaatcga agatcaaggt tacgatgtcg tttaattagg
     6001 caatattcaa cgtcatcaac accaaattaa aaaatcgaac tgatgagaat cccaacaatc
     6061 caaattatct catcagttcg atttttaatt tactcgtaac ctagtatctc cagtctgcaa
     6121 tacatctaat gttgcatcta atgcatcgac aattagattt tcaactgcag cttcagtata
     6181 aaacgcaata tgtggtgtta atatgacatc ttccctgtca atcaacgatt ctaacaatgg
     6241 atcgttcagt gttttgcccc tttgatcact tgggaaaagt ttgcgttcaa attcatacgt
     6301 atcaagtgct gcacctttaa tcacaccatt gtctaatgcg tctaataacg ccttagtatc
     6361 tactaaagaa cctctcgcac aattgacaaa tactgcgccc tttttaaaat gtttaaataa
     6421 ttcagcatta aatagataat gattatattt cgttgcaggt acatgtaatg tcacgatatc
     6481 agcaccttca accgcttcct caatcgtatc tttgtaatcg acatacgttg caattttagc
     6541 attaggaaac gggtcatatg cgaccacatc actttgataa ccattggcaa atatatcggc
     6601 tactacacgg ccaattcgac ctgtaccaat aacagctact tttaaatctt taatggattt
     6661 cgataaaata gtaggttccc atctaaaatc atgctctcgc actttcgttt gaatttgatt
     6721 aaaatgacga accacattaa tagcctgggt cacagcaaac tccgcaattg aattcggaga
     6781 gtatgacggc acatttgaca caatcaagtt atacttgttt gctaactcca aatcatatgt
     6841 atcaaatcca gcactacgtt gtgcgatttg tttaatacct agttcattta atcgtttata
     6901 aacatgctct gataatggta tttgttgtga tagcgataag ccatcataac tagcgacatc
     6961 ttcaacattg tcatcagtta atgcttcttt agtaatatct acctcaacat gatgtttctc
     7021 tgcccacgcc ttgatataag gcatatcctc atcgcgtaca ctcatgattt taatttttgt
     7081 cattttaaca tcacccttaa ctttattatt catataaata tgctaattct gttaatctta
     7141 ttgcagcttc gtctaattgc tggtcatcta acgccaatga gattctcaca taacgattac
     7201 cattctctcc aaatggtttc cctggagcaa caagtattga cttctctttc actaaaaatt
     7261 gctcaaattg ctcgctgtca taaccaggcg gtgtttccaa ccatacatat ataccacctt
     7321 tagcatgaac aaatggcaaa tcagcttttg caagcatggc ttcgaatcgg tcacgtcgtg
     7381 ctttaaatac attgctttgt tcttctaaaa aatcatcata atgattcaaa gcatatattg
     7441 cggcatcttg taatgcacca aacatcccag catttgtgtg cgtttggtac tttttcaaag
     7501 cttgaatcat atctttatta ccaactgcaa aaccaactct aaaacctgac atgttataac
     7561 ctttagacaa ggaataaatt tcaatcgcaa catctttccc attttccgaa gcaagtatac
     7621 taggattttt agcgtcgaaa ccgaaagcac cataagcaaa atcatgcacg attttagtgt
     7681 ctgtatcttt aaatttagct atcgcttcat caaaaacttc tttcgtagct gtcgatccag
     7741 ttggattatt tggatacgtt aaataaatga gttttgtttt atctattatt tgtgaatcaa
     7801 ctttggacca atctggcaaa taatgcggcg gttctaaatt aagcggaaca ggcttgccat
     7861 cagctaaaag tacacctgct aaataatcag tgtagcctgg gtcaggtagt aatacatagt
     7921 ctcctggatt gataacacat gttggtactg ccactaatcc attttttgta ccatataaaa
     7981 tacatacttc atcttcttta tctaacgtca catcatattg tctttgataa aaatctacaa
     8041 tggcttgctt gaacatctct ttaccatgaa aagcaccata tttttgattt tcaggaatag
     8101 ttagtgcttt ttgaaaatga tcaataatac cttgtggcgt gggcccatca gggattccaa
     8161 ctgccatatt aattaatggc aatggtccat gttcgatttt acgtcccatc gttttcccga
     8221 aataactatc agggatattt gctaatttgt tagagatcat caaattcctc ctctatcatt
     8281 aaacatagcc ttggcgacta tcatagtcct aacaacttgt atcactctca tttagatggt
     8341 tacaatgaca tcgccattca ccgttatgtt caacagaact tatgacacac gttgtattga
     8401 atgaatttat tttcatttta ggtaggtaca atattattgt caatattagg aattttcaga
     8461 ttaatataca ctcaatcgtt atgattcaac tgccatgtat atccgcatgc gcaaccagtt
     8521 agatatgctt atataaagta taacgcccat caaggtacgt attcaaacgt gaaccttaac
     8581 aggcgtcatt cattgttaaa taaaacttct taagcacata cttatttcac tatgcctttt
     8641 acgttcccct tatacttttc tcacatcttt ctattagact actcccttac acgccctgct
     8701 caatatcttt aatcatttca tctacagtta ttttcgcact cgttaagaca ataggaacgc
     8761 ctgcacctgg atgcgtactt gcacctgcaa aatataaatc tttataatct cgcgatacat
     8821 tttgtggacg ataataatta ctttgcgcta aagttggcat taaaccgaat gccgaaccaa
     8881 atttcgcatg atacgtttgc tcaaaatcat ttggcgtaaa gattgtttct gaaacaatat
     8941 gcgattttat atcttcaaat acttcaatcg ttgctaattt acgataaata atttccttta
     9001 tttgttgtgt caaagcttca tctgaccaat cgattccgct acctgtttta agttccggag
     9061 tcggcattaa cacataaata ccagttttgc cttctggcgc aagtgattta tcagcgaccg
     9121 ctggaatata cacataaatc gaaggatcat atgataaacg tccctcaaat atttcttcaa
     9181 tattgcctct aaaatcatct gaaaaaataa cattatgaag tctcacttga tctgtcacat
     9241 caatatctat accgatatac attaaaaatg ctgaacaaga gtaatctaag tctgcaattt
     9301 tatgtggtgg atacttttta ataggtgcaa aatctggcat taatgattcc gcaacactag
     9361 ggaaatcagc cgtacataaa attttatcaa attttcttat gtcaccattc acttttatcg
     9421 catcagctcg tttgaattta ggatcaataa taatttgctc aatttcagca ttaagttcaa
     9481 gattaacgcc taaatcttta tttaattgcg ctagcccttg agccatgcca tacataccgc
     9541 ctttaataaa atgcacacca aacatcattt caatcatagg aataattgaa tatagtgacg
     9601 ggcctcgttt tggatcaatt cctatgtata acgtttgaaa cgctaaaagc ttttgtatct
     9661 tttcgttatc aatataatgt tcaattagct gatctgcatg atttaacgtt tttaacttag
     9721 caccttgcac aagtgacgtc atattataaa agtcacttgg tttgcgatac gttctttcta
     9781 agaaatagcg acgtgcaatt tcatattttt tataaacatc tgttaaaaag gacataaaac
     9841 catgcgttga accaggttct atactttcta gcatgtgctg taattcagct aaatctgtag
     9901 gcaccgttat acgatcatcg cggtcaaaat acacatcgta aatataacgt aattgtctca
     9961 attcaatata atcttcataa tttttaccac acattgtaaa tacatcttta taaacatctg
    10021 gcatcatgac aattgtgggg cccatatcaa atgtaaagcc gtctttcttt aattgattca
    10081 tacgcccgcc tacattatta tttttttcaa atattgtcac ttcatgacct tgagaagcaa
    10141 tacgggctgc cgctgctaat cctgtgacac ctgcaccaat tactgcaatc ttcattattc
    10201 aaccacctat attctatgat atttactatt tatttcatga aacaactttg cttttttcct
    10261 cttatccaca aaaacacgtt catgtaatgt atagttagcc tgtctcactt cgtccagtat
    10321 ttcaatatat atacgtgctg ctaattctat gattggttgt gcttcaatac taaatacttt
    10381 gatttgatcc ataacatctc gaaaatcttt ttctgcgata gctgcataat attcccataa
    10441 gtcaatataa tgattattaa caccattttg gtacacttca gcaatatcaa cttcatattg
    10501 ctttaatcgt tgcttactaa aatatatccg ttcattttca aaatcttcac cgacatctct
    10561 taatatatta atcaattgca acgattcacc aagccttcta gcgacatcgt atgtctgatg
    10621 tgtttcatga tcacttaaaa tcggagtcaa tacttcacct actgtaccag caacaccata
    10681 acaatatccg aataattcag cgtccgtttc aaacattgta aaatgttgat ctttatatac
    10741 agtatcaatg agattataga aagattgaaa ggcgatattt ttatgttgtg caacatgctg
    10801 aagagccatc atgattctac gatcactttg aaagtgatga tgttcatatg ggtatttttc
    10861 aatagattgt atatcttctt ttatttgatt taaaaattga atatcgccat aaacatctat
    10921 actgtcatca attttacgac acacagcata aattgcccaa accgcttttc tttgatcttc
    10981 tggtaacaag tcaaaagcgt aagaaaagct ttttgaatgt ttcttcatga ttttatgaca
    11041 atatttaaaa ttcatagcca tcattgtcat actagtcctc ctatattgaa atgccattac
    11101 cttgatttat tgttctttag atatagaata ttgacgacct ttccattcaa ctacaccata
    11161 acgatgcgtt tgtttccaag attggatgaa aattttagta aaaaacataa ataacaatgg
    11221 atgacatacc attaataaat tagaaaattg gccgaccctt cgatgcagat aaataaattg
    11281 tgtagtatag ctcaagtaaa ctgttaacat ttttcctaca gacatttggc gatattttaa
    11341 actaagacat agccctaaaa tactcgcaat agaaccgaac aaccacaaca caattgctgc
    11401 catgatctta ggctttgtgc cacctgcccc agtcgacaaa tgctttgtcc atccttcttg
    11461 taatgactga aatccttctt gatacatgcg aaatgcaaca aatggaaatc cttcataaac
    11521 tgttacgggc aatgattgtg aagtatatgc acttcctaaa gcaaatcctt caataatatg
    11581 acggttcgca cttttatgac ctccagttgc ataataatct tctttatttg ttaatgtcac
    11641 cggtccaaat gcatgctggt tagtccgacc gtcgtctaag gtagaaaata cattcatacc
    11701 aacgactgtc attaaattaa atatcgctga aaacccttcg tagaaacgtt ttgttatatg
    11761 ataaggctgt acgcttaaca atcctttttc gccttgtaat tgatactgat taatcaacgt
    11821 ttcaacagca tctttcctta agaaagttac atcagcatct acaaaagcaa tacggttcgt
    11881 acatgcatgc gtcatacctt gataacaagc atgcgatttc ccataccatt tgccgtcagc
    11941 atcatcaaca acatctacta cagtcgcacc atatgaacgc gctacacgtg ctgtgtcatc
    12001 tgtcgatccg tcattcataa caatgacatc tactggaact tgctgttgta ttatcgaatg
    12061 tagtaaatga cctattcttt tttcttcgtt tctagccgga ataataattg ttaatgattt
    12121 atgattgaag ttccgcgttt tcgcctttag ctgatgtcta cgattaaata tcaatgcacc
    12181 acacgccata gacatggtca ctattactgt taatattcgt gataaccatt tcatagatat
    12241 cacttcctat tcttcgcttc tcgcgcgttt attttgtctg cgacttgttg cccacttaat
    12301 gtaaccattg gcatgccacc accaggattt actgatccac ctacaaagta caagttttca
    12361 aaatactgac tttctttagg aaatttaaat cctttgtttt tctttttatc tgctacaaca
    12421 ccatatattg caccacgatt agaacgataa tttttttcaa tatcttccgg tgtccaaaca
    12481 tcttcataaa taatgtgttt tcttaaatca gtgagtccca ttttttctaa tttatccaaa
    12541 attttatccc taaacttcgc ataatcttca gttgtaaaag gctgatcttg aatatatgga
    12601 atatgtggta agactttgat attttcataa cctactggcg cttgtgtgtg atcagtttta
    12661 ttcgtattta ctagataaat ggtcggatca tctggcaata ccttttcatg aaaaacttgt
    12721 tgataattga gataagcatt ttccgtaaaa aagaaattat gatgtgctaa ttgcgggtat
    12781 tggcaagcaa tacctaaatg catcacatat cctgagcttg ctggctcaaa ttcccgctct
    12841 aatttgttta atcgttgagt accaaggtga agtaaatatt tataagtagg tatgacttcc
    12901 atatttgaaa taatataatc tgcctttaca aactcacctg tatctaatct gacacctgtc
    12961 acacgtcttt gatatgtttt aatattgtcc acacgtgtac ctgtatgaat tgtgacacct
    13021 tcttcacgcg ctagcttttc caaggcattg gctaaatgat ggattccacc ttctacatac
    13081 caaaggcctt gctcttgttg catatggaat aacatagata atacagctgg cgcatcgtat
    13141 gatgaagaac ctacatattt gataaaatag cctaacattt gtcgcaaata tggattcgag
    13201 atacgcttgt ctatggcctg ttgcatagta tgtacataat cataattaat aagtgcattt
    13261 aatggcccat gaaatttaat aatttgagat agtgtatcta aaccatagtt aaaataccct
    13321 ttttcagtaa tacgatcgat tcgtcttgta taattcaaat aattttgcag ttcctctata
    13381 tcctttttcg acaatatcgc attatgctga cctgtttctt taataccttc atacaaatcg
    13441 atagtcgttc catctggaaa aaagctacgc cattgatgtg gcaatctctt gattgtaacg
    13501 tagtctgaca tttgcttctt gctatattcg aataattttt caaaaatata aggcatcgtt
    13561 aaaatagatg gacctaaatc aaagccaaag ccatctgatt catgacgatt aactttgcct
    13621 cctatatgat tattttgttc atataatgag accgaatagc cactttgtgc cattcgaatt
    13681 gctgcagaaa tcccacctaa gccaccacca ataacgatga tatgtttagt catgacgttc
    13741 acctcttcgt tttaatatgc gtagtaactg cgttaatctc ggtcgattat aacgttgcac
    13801 aataatgata ggaacattag ctatcattgc atagaaaata tttatatact ttactaaacg
    13861 agggccttta ttgaatatga tgactggaag tattgatatc caatgaatta actctgccct
    13921 ctttgtctct ataatcattt tttcaatttc atcagaattg attgtcatta aatgacgctg
    13981 atcatatata tttcgattaa gcttatgacc atctaaaatc ttatgcttcc attttcttac
    14041 gtaaaaccat ttgttccaaa attttccatg cttctcaaag ttaaatgatt taaatattat
    14101 atgcttctga cgaaaatact tgtcaggaat tcttgtacct aaatttgcta tatttagttg
    14161 aacaattaac caatacatac tacagaaaaa tgctgttttg atatattttt tcatggtttt
    14221 catctaaatt gaatcactct caatcatact gacatagtat aaattatcat tttattactt
    14281 agttccctaa agatcagtga ataaaccgct ctcatttata tttatataaa acaaaaacgc
    14341 caatactctc atgttagaga atattgacgt catttgattt acctttgatt aatgaatgaa
    14401 attatatgaa cctgcttggt ttgctgaaat tgtacgagat gtaaccacac cagcaccatg
    14461 tccatagttc atttctgaaa cacgaacaga accgttgctg ttaacgcctt caacgtaagc
    14521 aacatgaccg taatagcctt gtgttgtttg catgatagca ccagcttttg gtgtattgtt
    14581 cactgtatag ccagatgatg cagctgcgct agcccaatta ctagcattgc cccatgttga
    14641 accaattttc ccaccaacac gatcaaatac ataataagta cattgtcctg aagtatataa
    14701 gttacttcct gatgcataac cattagaaat tgaacgacca tttgaagatg gcgctgcagt
    14761 tgtagtcaca tgaacattat tgcttgttgt gctataactt gcacctaaac caccagtgta
    14821 atagttattt gttgctgttt ggctattgtt tgtatagtta ttgtattgat atgaatgatt
    14881 atagtagtta ttgtaagatg cattgttata actataagta ttgtagttat tgtaatagta
    14941 tgtgttgttt tgcgttaatt gacttggatt ccaatttcct gtccaagtgt aatgataatt
    15001 accttgtgca tcaattgtat acgtatagct gtatgattga gcgtcattag aattatatcc
    15061 attgttattt tgttctgcgg cttgtgcatc atgtcctgca aatgcgatag tggcaagtcc
    15121 tgctgtagcg attgtagctg taacgatttt tttcataatt aaatatcctc ccaataatca
    15181 aaacactcta tacatatagt cattagcgac tcaattattt taaattttat attttttatt
//
LOCUS       DALMNS010000073        15036 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.073, whole genome shotgun sequence.
ACCESSION   DALMNS010000073 DALMNS010000000
VERSION     DALMNS010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 15036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15036
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.073"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            455..1792
                     /locus_tag="O6Y56_001848"
     CDS             455..1792
                     /locus_tag="O6Y56_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HDB5575098.1"
                     /translation="MKQPILNKLESLNQEEAISLHVPGHKNMTIGHLSQLSMTMDKTE
                     IPGLDDLHHPEEVILESMKQVEKHSDYDAYFLVNGTTSGILSVIQSFSQKKGDILMAR
                     NVHKSVLHALDISQQEGYFIETHQSPLTNHYNKVNLSRLNNDGHKLAVLTYPNYYGET
                     FNVEEVIKSLHQLGIPLLIDEAHGAHFGLQGFPDSTLNYQADYVVQSFHKTLPALTMG
                     SVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTVFFDKRAQLI
                     ECLENKGFEMLQVDDPLKLLIKYEGFTGHDIQNWFMNAHIYLELADDYQALAILPLWH
                     HDDTYLFDSLLRKIEDMILPKKSVSIVKQTQLLTTEGNYKPKRFEYVTWCDLKKAKGK
                     VLARHIVPYPPGIPIIFKGETITENMIELVNEYLETGMIVEGIKNNKILVEDE"
     gene            1794..2411
                     /locus_tag="O6Y56_001849"
     CDS             1794..2411
                     /locus_tag="O6Y56_001849"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDB5575099.1"
                     /translation="MSAFITFEGPEGSGKTTVINEVYHRLVKDYDVIMTREPGGVPTG
                     EEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQG
                     YARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQEDLKFH
                     EKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEKI"
     gene            2439..2768
                     /locus_tag="O6Y56_001850"
     CDS             2439..2768
                     /locus_tag="O6Y56_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-di-AMP receptor"
                     /protein_id="HDB5575100.1"
                     /translation="MKMIIAIVQDQDSQELADQLVKNNFRATKLATTGGFLRAGNTTF
                     LCGVNDDRVDEILSVINQTCGNREQLVSPITPMGGSADSYIPYPVEVEVGGATVFVMP
                     VDAFHQF"
     gene            2982..3908
                     /locus_tag="O6Y56_001851"
     CDS             2982..3908
                     /locus_tag="O6Y56_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000344319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDB5575101.1"
                     /translation="MDEQQQLTNAYHSNKLSHAYLFEGDDAQTMKQVAINFAKLILCQ
                     TDSQCETKVSTYNHPDFMYISTTENAIKKEQVEQLVRHMNQLPIESTNKVYIIEDFEK
                     LTVQGENSILKFLEEPPDNTIAILLSTKPEQILDTIHSRCQHVYFKPIDKEKFINRLV
                     EQDMSKPVAEMISTYTTQIDNAMALNEEFDLLALRKSVIRWCELLLTNKPMALIGIID
                     LLKQAKNKKLQSLTIAAVNGFFEDIIHTKVNVEDKQIYSDLKNDIDQYAQKLSFNQLI
                     LMFDQLTEAHKKLNQNVNPTLVFEQIVIKGVS"
     gene            3909..4712
                     /locus_tag="O6Y56_001852"
     CDS             3909..4712
                     /locus_tag="O6Y56_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage 0 sporulation family protein"
                     /protein_id="HDB5575102.1"
                     /translation="MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIV
                     KNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNERDAENALILCKDIVREQGLDMRL
                     VNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
                     CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQ
                     LPDIGEAIETPDGNGKVVALNILDISMQVKLEGHEQPLEYKLEEIETMH"
     gene            4729..5076
                     /gene="yabA"
                     /locus_tag="O6Y56_001853"
     CDS             4729..5076
                     /gene="yabA"
                     /locus_tag="O6Y56_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499035.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication initiation control protein YabA"
                     /protein_id="HDB5575103.1"
                     /translation="MDRNEIFEKIMRLEMNVNQLSKETSELKALAVELVEENVALQLE
                     NDNLKKVLGNDEPTTIDTANSKPAKAVKKPLPSKDNLAILYGEGFHICKGELFGKHRH
                     GEDCLFCLEVLSD"
     gene            5350..6075
                     /locus_tag="O6Y56_001854"
     CDS             5350..6075
                     /locus_tag="O6Y56_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HDB5575104.1"
                     /translation="MLKENERFDQLIKEDFSIIQNDDVFSFSTDALLLGHFTKPRTKD
                     IVLDLCSGNGVIPLLLFAKHPRHIEGVEIQKTLVDMARRTFQFNDVDEYLTMHHMDLK
                     NVTKVFKPSQYTLVTCNPPYFKENQQHQHQKEAHKIARHEIMCTLEDCMIAARHLLKE
                     GGRLNMVHRADRLMDVLFEMRKVNIEPKKVVFIYSKVGKSAQTIVVEGRKGGNQGLEI
                     MPPFYIYNEDGNYSEEMKEVYYG"
     gene            6068..6316
                     /locus_tag="O6Y56_001855"
     CDS             6068..6316
                     /locus_tag="O6Y56_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HDB5575105.1"
                     /translation="MDSHFVYIVKCSDGSLYTGYAKDVNARVEKHNRGQGAKYTKVRR
                     PVHLVYQEMYETKSEALKREYEIKTYTRQKKLRLIKER"
     gene            6318..7157
                     /gene="rsmI"
                     /locus_tag="O6Y56_001856"
     CDS             6318..7157
                     /gene="rsmI"
                     /locus_tag="O6Y56_001856"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDB5575106.1"
                     /translation="MAVLYLVGTPIGNLADITYRAVDVLKRVDMIACEDTRVTSKLCN
                     HYDIPTPLKSYHEHNKDKQTAFIIEQLELGIDVALVSDAGLPLISDPGYELVVAAREA
                     NIKVETVPGPNAGLTALMASGLPSYVYTFLGFLPRKEKEKSAVLEQRMHENSTLIIYE
                     SPHRVTDTLKTIAKIDATRQVSLGRELTKKFEQIVTDDVTQLQALIQQGDVPLKGEFV
                     ILIEGAKANNEISWFDDLSINEHVDHYIQTSQMKPKQAIKKVAEERQLKTNEVYNIYH
                     QIS"
     gene            7442..9415
                     /gene="metG"
                     /locus_tag="O6Y56_001857"
     CDS             7442..9415
                     /gene="metG"
                     /locus_tag="O6Y56_001857"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDB5575107.1"
                     /translation="MAKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDV
                     RYLTGTDEHGQKIQEKAQKAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHK
                     HVVEQVFERLLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGH
                     EVELVKEESYFFNISKYTDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRT
                     SFNWGVHVPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRF
                     HSIIWPILLMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYY
                     LMRELPFGSDGVFTPEAFVERTNFDLANDLGNLVNRTISMINKYFDGELPAYQGPLHE
                     LDEEMEAMALETVKSYTESMESLQFSVALSTVWKFISRTNKYIDETTPWVLAKDDSQK
                     DMLGNVMAHLVENIRYAAVLLRPFLTHAPKEIFEQLNINNPQFMEFSSLEQYGVLTEP
                     IMVTGQPKPIFPRLDSEAEIAYIKESMQPPATEEEKEEIPSKPQIDIKDFDKVEIKAA
                     TIIDAEHVKKSDKLLKIQVDLDSEQRQIVSGIAKFYTPDDIIGKKVAVVTNLKPAKLM
                     GQKSEGMILSAEKDGVLTLVSLPSAIPNGAVIK"
     gene            9446..10219
                     /locus_tag="O6Y56_001858"
     CDS             9446..10219
                     /locus_tag="O6Y56_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDB5575108.1"
                     /translation="MLIDTHVHLNDEQYDDDLGEVITRAREAGVDRMFVVGFNKSTIE
                     RAMKLIDEYDFLYGIIGWHPVDAIDFTEEHLEWIESLAQHPKVIGIGEMGLDYHWDKS
                     PADVQKEVFRKQIALAKRLKLPIIIHNREATQDCIDILLEEHAEEVGGIMHSFSGSPE
                     IADIVTNKLNFYISLGGPVTFKNAKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRN
                     EPARVTLVAEQIAELKGLSYEEVCEQTTKNAEKLFNLNS"
     gene            10386..10922
                     /gene="rnmV"
                     /locus_tag="O6Y56_001859"
     CDS             10386..10922
                     /gene="rnmV"
                     /locus_tag="O6Y56_001859"
                     /EC_number="3.1.26.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease M5"
                     /protein_id="HDB5575109.1"
                     /translation="MKINEFIVVEGRDDTERVKRAVECDTIETNGSAINEQTLEVIRN
                     AQQSRGVIVLTDPDFPGDKIRSTITEHVKGVKHAYIDREKAKNKKGKIGVEHADLIDI
                     KEALMHVSSPFDEAYESIDKSVLIELGLIVGKDARRRREILSRKLRIGHSNGKQLLKK
                     LNAFGYTEADVRQALEDE"
     gene            10933..11826
                     /gene="rsmA"
                     /locus_tag="O6Y56_001860"
     CDS             10933..11826
                     /gene="rsmA"
                     /locus_tag="O6Y56_001860"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDB5575110.1"
                     /translation="MLDNKDIATPSRTRALLDKYGFNFKKSLGQNFLIDVNIINNIID
                     ASDIDAQTGVIEIGPGMGSLTEQLARHAKRVLAFEIDQRLIPVLNDTLSPYDNVTVIN
                     EDILKANIKKAVENHLQDCEKIMVVANLPYYITTPILLNLMQQDIPIDGYVVMMQKEV
                     GERLNAEVGSKAYGSLSIVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLV
                     TVDNEEAFFKLAKAAFAQRRKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGET
                     LSIQDFAKLYEEKKKFPQLEN"
     gene            11926..12189
                     /locus_tag="O6Y56_001861"
     CDS             11926..12189
                     /locus_tag="O6Y56_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Veg family protein"
                     /protein_id="HDB5575111.1"
                     /translation="MPKSILDIKNSIDCHVGNRIVLKANGGRKKTIKRSGILKETYPS
                     VFIVELDQDKHNFERVSYTYTDVLTENVQVSFEEDNHHESIAH"
     gene            12499..13347
                     /locus_tag="O6Y56_001862"
     CDS             12499..13347
                     /locus_tag="O6Y56_001862"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDB5575112.1"
                     /translation="MIYETAPAKINFTLDTLFKRNDGYHEIEMIMTTVDLNDRLTFHK
                     RKDRKIVVEIEHNYVPSNHKNLAYRAAQLFIEQYQLKQGVTISIDKEIPVSAGLAGGS
                     ADAAATLRGLNRLFNIGASLEELALLGSKIGTDIPFCIYNKTALCTGRGEKIEFLNKP
                     PSAWVILAKPNLGISSPDIFKLINLDKRYDVHTKMCYEALENRDYQQLCQSLSNRLEP
                     ISVSKHPQIDKLKNNMLKSGADGALMSGSGPTVYGLARKESQAKNIYNAVNGCCNEVY
                     LVRLLG"
     gene            13361..14185
                     /gene="purR"
                     /locus_tag="O6Y56_001863"
     CDS             13361..14185
                     /gene="purR"
                     /locus_tag="O6Y56_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pur operon repressor"
                     /protein_id="HDB5575113.1"
                     /translation="MRYKRSERIVFMTQYLMNHPNKLIPLTFFVKKFKQAKSSISEDV
                     QIIKNTFQKEKLGTVITTAGASGGVTYKPMMSKEEATEVVNEVITLLEEKERLLPGGY
                     LFLSDLVGNPSLLNKVGKLIASIYMEEKLDAVVTIATKGISLANAVANILNLPVVVIR
                     KDNKVTEGSTVSINYVSGSSRKIETMVLSKRTLAENSNVLVVDDFMRAGGSINGVMNL
                     MNEFKAHVKGVSVLVESKEVKQRLIEDYTSLVKLSDVDEYNQEFNVEPGNSLSKFS"
     gene            14202..14582
                     /locus_tag="O6Y56_001864"
     CDS             14202..14582
                     /locus_tag="O6Y56_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDB5575114.1"
                     /translation="MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNVDGKIVSAD
                     VQAQTKQVLENLKVVLEEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARS
                     CVEVARLPKDVKVEIELVSKIKEL"
     gene            14654..14956
                     /gene="spoVG"
                     /locus_tag="O6Y56_001865"
     CDS             14654..14956
                     /gene="spoVG"
                     /locus_tag="O6Y56_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation regulator SpoVG"
                     /protein_id="HDB5575115.1"
                     /translation="MKVTDVRLRKIQTDGRMKALVSITLDEAFVIHDLRVIEGNSGLF
                     VAMPSKRTPDGEFRDIAHPINSDMRQEIQDAVMKVYDETDEVVPDKNATSEDSEEA"
BASE COUNT         5492 a         1992 c         2980 g         4572 t
ORIGIN      
        1 gagagccgaa gaagaggaaa gaagcaagcg attgtcacaa gtcaagaaag gttcttagcg
       61 tcgatggtag ccaacttacg ttccgctaga gtagaacgtt gccaggcaaa aaatggatgc
      121 gatgagccgc attgagtttt ggaaatgata attaaataat gtgcactttt gattgtttaa
      181 atctgtgact agaagtataa gtgaagacat tcagaagtat tataaaaagt gaacagcagt
      241 aagatagttt ttaatcataa atcatcttac tgctgttttt aggttttatg tctaatatct
      301 tttaaatcga aatacaaaaa ggaaattaat tattatacaa tagacaagct attgcataag
      361 taacactaac ttttgtcaaa gaagtgttac tatataatta atacttttga aaataactaa
      421 ttccaaaaca gtgtaaataa aggaagcgta tatcatgaag caacctattt taaataaatt
      481 agaaagttta aatcaagaag aagcgatttc tttgcatgtt ccgggtcata aaaatatgac
      541 tatcggtcat ttatctcaat tatcaatgac aatggataaa actgaaatac ctggattaga
      601 tgatttacat catcctgaag aagtcatttt ggaaagtatg aagcaggtgg agaaacattc
      661 agattatgat gcttatttct tagtgaatgg caccacttca ggaatattat ctgtcatcca
      721 gtctttttca cagaaaaaag gcgatatctt aatggcaaga aatgtacata aatctgtatt
      781 acatgcgctc gatattagcc aacaagaagg gtattttatt gaaacgcatc aaagtccgtt
      841 aacgaatcat tataataaag ttaatttaag ccgtttgaat aatgacggtc acaaacttgc
      901 tgtgttgact tatcctaact attacggtga aacatttaat gtagaagagg ttatcaaatc
      961 tttgcaccaa ttaggcattc ctttactcat tgacgaagca cacggcgcgc actttggatt
     1021 gcaaggattt ccagattcta cattaaatta tcaagctgac tatgttgttc aatcttttca
     1081 taaaacgtta ccagctttaa cgatgggctc ggtactttat attcataaaa atgcacctta
     1141 tagagaaaat attatagaat atctaagcta tttccaaaca tctagtcctt catatttgat
     1201 tatggctagt ttagagtcag ctgcccagtt ctataaaaca tatgatagta ccgtgttttt
     1261 tgataagaga gcgcaattaa tcgaatgttt ggagaataaa ggttttgaaa tgcttcaagt
     1321 tgatgatccg ttgaagctgt tgataaaata tgaaggcttt acaggtcatg atattcaaaa
     1381 ttggtttatg aatgcacata tctatttaga attagctgac gactatcaag cattagcgat
     1441 attgccgtta tggcatcatg atgatacgta tttatttgat tcgcttttac gtaaaattga
     1501 agatatgatt ttaccgaaaa aatcagtttc tatagttaaa caaacacaac ttttaacaac
     1561 tgaaggtaac tataaaccaa aacgctttga atatgttact tggtgtgatt tgaaaaaggc
     1621 aaaaggtaaa gttctggcgc gacatattgt cccatatccg ccagggattc ctattatttt
     1681 caaaggagaa acaataactg aaaatatgat agaattggta aatgaatatc tggaaactgg
     1741 aatgatagtt gaaggaatta aaaataataa aattttagtt gaggatgaat aaaatgtcag
     1801 cttttataac ttttgagggc ccagaaggct caggtaaaac aactgtaatt aatgaagttt
     1861 atcatagatt agtaaaagat tatgatgtca ttatgactag agaaccaggt ggtgttccta
     1921 ctggtgaaga aatacgtaaa attgtattag aaggcaatga tatggacatt agaactgaag
     1981 caatgttatt tgctgcatct agaagagaac atcttgtatt aaaggtcata ccagctttaa
     2041 aagaaggtaa ggttgtgttg tgtgatcgct atatcgatag ttcattagct tatcaaggtt
     2101 atgctagagg gattggcgtt gaagaagtaa gagcattaaa cgaattcgca ataaatggat
     2161 tatatccaga cttgacgatt tatttgaatg ttagtgctga agtaggacgc gaacgtatta
     2221 ttaaaaattc aagagatcaa aatagattag atcaagaaga tttaaagttt cacgaaaaag
     2281 taattgaagg ttaccaagaa atcattcata atgaatcaca acggttcaaa agcgttaatg
     2341 cagatcaacc tcttgaaaat gttgttgaag acacgtatca aactatcatc aaatatttag
     2401 aaaagatatg atataattgt tagaagaggt gttataaaat gaaaatgatt atagcgatcg
     2461 tacaagatca agatagtcag gaacttgcag atcaacttgt taaaaataac tttagagcaa
     2521 caaaattggc aacaacaggt gggtttttaa gagcaggtaa tacaacattc ttatgtggtg
     2581 tcaatgatga ccgtgtagat gaaatattgt ctgtgattaa tcaaacgtgt ggtaatagag
     2641 aacagttggt ttcacctatt acacctatgg gaggcagtgc ggattcgtac attccatatc
     2701 cagttgaagt tgaagttggc ggtgctactg tatttgttat gccagttgat gcattccatc
     2761 aattttaatt ctataataca atcatcaatt agagatactt aaaatagtgt attaataagt
     2821 tattaacaat tttgggttgc ttgactgcga ctagttcaga tgccaataga tttgattttt
     2881 gtggttctaa gaataatcac aaatcatggt cgctattgtt gcagtaatta gttgctcttt
     2941 ggcaaccttt ttatataaaa gcaaaaggga gtttgtaatg aatggatgaa cagcaacaat
     3001 tgacgaatgc atatcattca aataaattat cgcatgccta tttatttgaa ggtgatgatg
     3061 cacaaacgat gaaacaagtt gcgattaatt ttgccaagct tattttatgt caaacagata
     3121 gtcaatgtga aacaaaggtt agtacatata atcatccaga ctttatgtat atatcaacaa
     3181 ctgagaatgc aattaagaaa gaacaagttg aacaacttgt gcgtcatatg aatcaacttc
     3241 ctatagaaag cacaaataaa gtgtacatca ttgaagactt tgaaaagtta actgttcaag
     3301 gggaaaacag tatcttgaaa tttcttgaag aaccaccgga caatacgatt gctattttat
     3361 tgtctacaaa acctgagcaa attttagaca caatccattc aaggtgtcag catgtatatt
     3421 tcaagcctat tgataaagaa aagtttataa atagattagt tgaacaagac atgtctaagc
     3481 cagtagctga aatgattagt acttatacta cgcaaataga taatgcaatg gctttaaatg
     3541 aagaatttga tttattagca ttaaggaaat cagttatacg ttggtgtgaa ttgttgctta
     3601 ctaataagcc aatggcactt ataggtatta ttgatttatt gaaacaggct aaaaataaaa
     3661 aactgcaatc tttaactatt gcagctgtga atggtttctt cgaagatatc atacatacaa
     3721 aggtaaatgt agaggataaa caaatatata gtgatttaaa aaatgatatt gatcaatatg
     3781 cgcaaaagtt gtcgtttaat caattaattt tgatgtttga tcaactgacg gaagcacata
     3841 agaaattgaa tcaaaatgta aatccaacgc ttgtatttga acaaatcgta attaagggtg
     3901 tgagttagat gccaaatgta ataggtgttc agtttcaaaa agcgggaaaa ttagaatatt
     3961 atacacctaa tgatatacaa gtagatatag atgactgggt agttgtcgaa tctaaaagag
     4021 gcatagagat aggtattgtt aaaaatccat taatggatat tgctgaagag gatgttgtgt
     4081 tacctcttaa aaatattatt cgcattgctg atgacaaaga tattgataaa tttaattgta
     4141 atgaacgaga tgctgaaaat gcattaatac tatgtaaaga cattgtaaga gaacaaggtt
     4201 tggacatgcg tttagtcaat tgcgaatata cattagataa atcgaaagtt atttttaatt
     4261 ttacggcgga tgatcgtatt gattttagaa aattagtaaa aatattagcg caacatttaa
     4321 aaacacgtat cgagttgaga caaattggtg taagggatga agccaaattg cttggcggta
     4381 tcggaccttg tggtaggtcg ttatgttgtt ctacattttt aggagatttt gaaccagtat
     4441 cgattaagat ggctaaggat caaaatttat cattaaatcc aactaaaatt tccggtgcat
     4501 gtggtcgttt gatgtgttgt ttaaaatatg aaaatgacta ctatgaggaa gtacgtgcac
     4561 aattacctga tattggtgaa gcaattgaaa cgcctgatgg taacgggaaa gtagttgctt
     4621 taaatatatt agacatttct atgcaggtga agcttgaggg acacgaacag ccacttgaat
     4681 ataaattaga agaaatagaa actatgcatt aaggaggcat tattacattt ggatcgcaat
     4741 gaaatatttg aaaaaataat gcgtttagaa atgaatgtca atcaactttc aaaggaaact
     4801 tcagaattaa aggcacttgc agttgaatta gtagaagaaa atgtagcgct tcaacttgaa
     4861 aatgataatt tgaaaaaggt gttgggcaat gatgaaccaa ctactattga tactgcgaat
     4921 tcaaaaccag caaaagctgt gaaaaagcca ttaccaagta aagataattt ggctatattg
     4981 tatggagaag gatttcatat ttgtaaaggc gaattatttg gaaaacatcg acatggtgaa
     5041 gattgtctgt tctgtttaga agttttaagt gattaatcaa gcacactcaa atagtgttat
     5101 aattataaat gaatatggtt tggataagtc tgagacaatg catgtttcag gctttaattg
     5161 tgtataaagt tttggtgatt gcataagaga tagcggtact aaatgttatt attaagtgtg
     5221 cacgcagtat cattagttat aaaatgtagc tgttaaaagt caaaaataca tcgaatgtag
     5281 ataggcatat aatataaaaa gagatttcaa ttactcaata gaaaaaggtt gtcttcatag
     5341 gagtttaaaa tgttaaaaga gaatgaacga tttgatcaac taatcaaaga agattttagt
     5401 attattcaaa atgatgatgt tttttcgttt tcaacggatg ctttgttgtt agggcatttt
     5461 acaaaaccta gaacaaaaga tattgtgttg gacttatgtt caggcaatgg ggtgataccc
     5521 ttgttattgt ttgcgaaaca tccacgacat atagaaggtg ttgagattca aaaaacactt
     5581 gtcgatatgg cgcgacgcac atttcaattc aatgatgttg atgaatattt aacaatgcat
     5641 cacatggatt tgaaaaacgt tactaaagta tttaaacctt cacaatatac tttagtaacg
     5701 tgtaatccgc cttattttaa agagaatcag caacaccaac atcaaaaaga agcacataag
     5761 atagcgagac atgagattat gtgtacactt gaagattgca tgattgcagc ccgtcattta
     5821 ttaaaagaag gtggcaggct aaatatggta catcgtgcag atagactaat ggatgtcttg
     5881 tttgaaatga gaaaagtgaa tattgaacct aagaaagtcg tttttatata tagtaaagta
     5941 gggaaatcgg cacaaacgat agttgtagaa ggtcgaaaag gtggaaatca aggtttagaa
     6001 atcatgcccc cattttatat ttataatgaa gatggtaatt atagtgaaga aatgaaggaa
     6061 gtatattatg gatagtcatt ttgtatatat tgtaaaatgt agtgatggaa gtttatatac
     6121 aggatacgct aaagacgtta atgcacgtgt tgaaaaacat aaccgaggtc aaggagccaa
     6181 atatacgaaa gtaagacgtc cggtgcattt agtttatcaa gaaatgtatg agacaaagtc
     6241 tgaagcattg aagcgtgaat atgaaattaa aacttatacc agacaaaaga aattgcgatt
     6301 aattaaggag cgatagtatg gctgtattat atttagtggg cacaccaatt ggtaatttag
     6361 cagatattac ttatagagca gttgatgtat tgaaacgtgt tgatatgatt gcttgtgaag
     6421 acactagagt aactagtaag ctgtgtaatc attatgatat tccaactcca ttaaagtcat
     6481 atcacgaaca taacaaggat aagcagactg cttttatcat tgaacagtta gaattaggta
     6541 ttgacgttgc gctcgtatct gatgctggat tgcccttaat tagtgatcct ggatacgaat
     6601 tagtagtggc agccagagaa gctaatatta aagtagagac tgtgcctgga cctaatgctg
     6661 ggctgacggc tttgatggcc agtggattac cttcatatgt atatacattt ttaggatttt
     6721 taccacgaaa agagaaagaa aaaagtgctg tattagagca acgtatgcat gaaaatagca
     6781 cattaattat atacgaatca ccgcatcgtg tgacagatac attaaaaaca attgcaaaga
     6841 tagatgcaac gcgacaagta tcactagggc gtgaattgac taagaagttc gaacaaattg
     6901 taactgatga tgtaacacaa ttacaagcat tgattcagca aggcgatgta ccattgaaag
     6961 gcgaattcgt tatcttgatt gagggtgcta aagcgaacaa tgagatatcg tggtttgatg
     7021 atttatctat caatgagcat gttgatcatt atattcaaac ttcacagatg aaaccaaaac
     7081 aagctattaa aaaagttgct gaagaacgac aacttaaaac gaatgaagta tataatattt
     7141 atcatcaaat aagttaatca ctttatcgat tatatgaaat tttaaacgat tttataaacg
     7201 caagctgtaa ttttaaatgg caagttatca ttttgcattg atactgataa aatgatgttg
     7261 actatgataa aaaaatgatg acatcgacgt tttttaatgt aaaataaata cattgaaagt
     7321 aataaatacc ttaacattga ataagatgaa aatgagatga cgagataaat gttcgcgtcc
     7381 gttgaaatgc atagaaatct tagatattat ttgaagtgag acattacgag gaggaacagt
     7441 tatggctaaa gaaacatttt atataacaac cccaatatac tatcctagtg ggaatttaca
     7501 tataggacat gcatattcta cagtggctgg agatgttatt gcaagatata agagaatgca
     7561 aggatatgat gttcgttatt tgactggaac ggatgaacac ggtcaaaaaa ttcaagaaaa
     7621 agctcaaaaa gctggtaaga cagaaattga atatttggat gagatgattg ctggaattaa
     7681 acaattgtgg gctaagcttg aaatttcaaa tgatgatttt atcagaacaa ctgaagaacg
     7741 tcataaacat gtcgttgagc aagtatttga acgtttatta aagcaaggtg atatctattt
     7801 aggtgaatat gaaggttggt attctgttcc ggatgaaaca tactacacag agtcacaatt
     7861 agtagaccca caatacgaaa acggtaaaat tattggtggt aaaagtccag attctggaca
     7921 tgaagttgaa ctagtaaaag aagaaagtta tttctttaat attagtaaat atacagaccg
     7981 tctattagaa ttctatgacc aaaatccaga ttttatacaa ccaccatcaa gaaaaaatga
     8041 aatgattaac aacttcatta agccaggact tgctgatttg gctgtttctc gtacatcatt
     8101 taactggggt gtccatgttc cgtctaatcc aaaacatgtt gtttatgttt ggattgatgc
     8161 gttagttaac tatatttcag cattaggcta tttatcagat gatgagtcac tatttaacaa
     8221 atactggcca gcagatattc atttaatggc taaggaaatt gtgcgattcc actcaattat
     8281 ttggcctatt ttattgatgg cattagactt accgttacct aaaaaagtct ttgcacatgg
     8341 ttggattttg atgaaagatg gaaaaatgag taaatctaaa ggtaatgtcg tagacccgaa
     8401 tattttaatt gatcgctatg gtttagatgc cacacgttat tatctaatgc gtgaattacc
     8461 atttggttca gatggcgtat ttacacctga agcatttgtt gagcgtacaa atttcgatct
     8521 agcaaatgac ttaggcaact tagtaaaccg tacgatttct atgattaata agtactttga
     8581 tggcgaatta ccagcgtatc aaggtccact tcatgaatta gatgaagaaa tggaagctat
     8641 ggctttagaa acagtgaaaa gctatactga aagcatggaa agtttgcaat tttctgtggc
     8701 attatctacg gtatggaagt ttattagtag aacgaataag tatattgacg aaacaacgcc
     8761 ttgggtatta gctaaggacg atagccaaaa agatatgtta ggcaatgtta tggctcactt
     8821 agttgaaaat attcgttatg cagctgtatt attacgtcca ttcttaactc atgcgccgaa
     8881 agagattttt gaacaattga acattaacaa tcctcaattt atggaattta gtagtttaga
     8941 gcaatatggt gtgcttactg agccaattat ggttactggg caacctaaac ctattttccc
     9001 aagattggat agcgaagcgg aaattgcata tatcaaagaa tcaatgcaac cgcctgctac
     9061 tgaagaggaa aaagaagaga ttcctagcaa accacaaatt gatattaaag actttgataa
     9121 agttgaaatt aaggcagcaa cgattattga tgctgaacat gttaagaagt cagataagct
     9181 tttaaaaatt caagtagact tagattctga acaaagacaa attgtatcag gaattgccaa
     9241 attctataca ccagatgata ttattggtaa aaaagtagca gttgttacta acttgaaacc
     9301 agctaaatta atggggcaaa aatctgaagg tatgatatta tctgctgaaa aagatggtgt
     9361 attaacctta gtaagtttac caagtgcaat tccaaatggt gcagtgatta aataactgta
     9421 tttttaaaaa ttaggagaga taattatgtt aatcgataca catgtccatt taaatgatga
     9481 gcaatacgat gatgatttgg gtgaagtgat tacacgtgct agagaagcag gtgttgatcg
     9541 tatgtttgta gttggtttta acaaatcgac aattgaacgc gcgatgaaat taatcgatga
     9601 gtatgatttt ttatatggca ttatcggttg gcatccagtt gacgcaattg attttacaga
     9661 agaacacttg gaatggattg aatctttagc tcagcatcca aaagtgattg gtattggtga
     9721 aatgggatta gattatcact gggataaatc tcctgcagat gttcaaaagg aagtttttag
     9781 aaagcaaatt gctttagcta agcgtttgaa gttaccaatt atcattcata accgtgaagc
     9841 aacacaagac tgtatcgata tcttattgga ggagcatgct gaagaggtag gcgggattat
     9901 gcatagcttt agtggttctc cagaaattgc agatattgta actaataagc tgaattttta
     9961 tatttcatta ggtggacctg tgacatttaa aaatgctaaa cagcctaaag aagttgctaa
    10021 gcatgtgtca atggagcgat tgcttgttga aaccgatgca ccgtatcttt cgccacatcc
    10081 gtatagaggg aagcgaaatg aaccggcaag agtaacttta gtagctgaac aaattgctga
    10141 attaaaaggc ttatcttatg aagaagtgtg cgaacaaaca actaaaaatg cagagaaatt
    10201 gtttaattta aattcataaa gttaaaagtg agaaagatca ccgccataaa tgtaaacgat
    10261 gctatattcg tttaatatgc tatggttctt tctcactttt ttaaattaaa atatcgtgca
    10321 tgtgcaatac gtgcgataga gatggttagt gctttgaaat taagaattgt aggaaggcgt
    10381 tttaaatgaa aatcaatgag tttatagttg tagaaggacg agatgatact gagcgtgtta
    10441 aacgagctgt tgaatgtgat acgattgaaa cgaatggtag tgccatcaac gaacaaactt
    10501 tagaagtaat tagaaatgct caacaaagtc gaggcgttat tgtattaaca gatccagatt
    10561 tcccaggaga taaaattaga agtacaatta ctgaacatgt caaaggtgtt aaacacgcgt
    10621 atattgatag agaaaaagct aaaaataaaa aagggaaaat tggtgttgaa catgccgact
    10681 taattgatat taaagaagcg ttaatgcatg ttagttcacc ctttgatgaa gcttatgaat
    10741 caattgataa atctgtgctt atagagttgg ggttaatcgt tgggaaagat gcaaggcgcc
    10801 gtagagaaat tttaagtaga aaattgcgaa tcggccattc caatggtaag cagttattga
    10861 aaaagttaaa tgcatttggt tataccgaag cggatgtaag gcaagcttta gaagatgaat
    10921 gaggaagtga aaatgttgga taataaagat attgcaacac catcaagaac gcgagcgttg
    10981 ttagataaat atggctttaa ttttaaaaaa agtttaggac agaacttttt aatagatgtg
    11041 aatatcatta ataatatcat tgatgcaagt gatattgatg cacaaactgg ggtgattgaa
    11101 attggtccag gtatggggtc gttgacagaa caattggcca gacatgctaa aagagtattg
    11161 gcatttgaaa ttgatcaacg tttaatacct gtattaaatg atacactatc accttatgat
    11221 aatgtgacgg tgattaatga agatatttta aaagcgaata ttaaaaaagc tgttgaaaat
    11281 catttacaag attgtgaaaa aataatggtt gttgcaaacc tgccgtacta tattacgacg
    11341 ccaattttat taaatttaat gcaacaagat ataccaattg atggctacgt ggtgatgatg
    11401 caaaaagaag tgggtgaacg cttaaatgct gaagtaggtt caaaagcata tggttcatta
    11461 tcaattgtcg tacaatacta tacagagact agtaaagtat taacggtacc taaatctgta
    11521 tttatgccac cacctaatgt tgattcaata gttgtaaaac tgatgcagag aactgaaccg
    11581 ttagtaacag tagataacga ggaagcattc tttaagttag caaaagcagc atttgcacaa
    11641 agaagaaaga caattaacaa taactatcaa aattatttta aagatggtaa acaacacaaa
    11701 gaagtgattt tacaatggtt agaacaagcg ggtattgatc caagacgtcg cggtgaaacg
    11761 ctatctattc aagattttgc taaattgtat gaagaaaaga aaaaattccc tcaattagaa
    11821 aattaaatga ttgacaaagc aaagcactat tgttaaaatt taaattttgt ttgacgaaaa
    11881 cgctgcaaat atggtattat gtaacttgta gcgaggtgga gcaatatgcc aaaatcaatt
    11941 ttggacatca aaaattctat tgattgtcat gtaggaaatc gtattgtact gaaagccaat
    12001 ggaggccgta agaaaacaat aaaacgttct ggaattttaa aagaaacata tccgtcagtt
    12061 ttcattgttg agttagatca agacaaacac aactttgaga gagtatctta tacatacact
    12121 gatgtgttaa ctgaaaatgt tcaagtttca tttgaagagg ataatcatca cgaatcaatt
    12181 gcacactaaa taagacatat agagatgtta gacgtttctt agtataagaa gtaaatatta
    12241 tgataattat ttgagtgttg ggcattatgt tcaatactct ttttatttac aaaatgttta
    12301 acactgatgt ttcgcttata gatttttcag taaatggata attgtattta taaacacaaa
    12361 tacaagtaaa tactaagtaa ttagatggag aaaattactt ttttattaaa aaaacactaa
    12421 aaaacaaatt aaaatgtcaa atattaattc tctttatgtt aaaatcatca tattaagata
    12481 acgaaaagag ggcggaaaat gatatatgaa acggcaccag ccaaaattaa ttttacgctc
    12541 gatacacttt ttaaaagaaa tgatggctat catgagattg aaatgataat gacaacagtt
    12601 gatttaaatg atcgtttaac ttttcataaa agaaaagatc gaaagatagt tgttgagatt
    12661 gaacataatt atgtgccttc taatcataaa aatctcgcat atcgtgcagc gcaactattt
    12721 attgagcaat atcaactaaa gcaaggtgta acaatttcta tcgataaaga aatacctgtt
    12781 tctgctggct tagctggagg ttcggctgat gcagcagcaa cgttaagagg attgaatcga
    12841 ctttttaata taggggcgag tttggaagaa ttggctctac taggcagtaa aatcgggaca
    12901 gatattccgt tttgtattta taataaaact gcactatgta ctggaagagg agagaaaatc
    12961 gagtttttaa ataaaccacc ttcagcttgg gtgattcttg ctaaaccaaa cttaggcata
    13021 tcatcaccag atatatttaa gttgattaat ttagataagc gttacgacgt acatacgaaa
    13081 atgtgttatg aggccttaga aaatcgagat tatcaacaat tatgtcaaag tttgtctaat
    13141 cgattagagc caatttctgt ttcaaaacac ccacaaatcg ataaattaaa aaataatatg
    13201 ttgaaaagtg gtgcagatgg tgcgttaatg agtggaagcg gaccgactgt gtatgggcta
    13261 gcacgaaaag aaagccaagc aaaaaatatt tataatgcag ttaacggttg ttgtaatgaa
    13321 gtgtacttag ttagactatt aggatagaag ggttgaaaag atgagatata aacgaagcga
    13381 gagaattgtt tttatgacgc aatatttgat gaaccatccg aataaattga ttccattaac
    13441 tttttttgtg aaaaaattta aacaggcgaa gtcttcaata agtgaagatg tccaaattat
    13501 aaaaaataca ttccaaaaag aaaagttagg tacagtaatt actactgctg gcgcaagtgg
    13561 tggtgttacg tataaaccaa tgatgagtaa agaagaggcg actgaagttg ttaatgaggt
    13621 cattactcta ttagaagaga aagaacgttt gttacctggc gggtatttat ttttatcaga
    13681 tttggtaggt aatccatcgc tactaaacaa agttggtaag ttaattgcca gtatttacat
    13741 ggaagaaaaa ttagatgctg ttgttaccat tgcgacaaaa ggtatttcat tggcaaatgc
    13801 ggttgctaat attttaaatt taccagtagt agtgattaga aaagacaaca aggtgactga
    13861 aggttctaca gtttcaatta attacgtttc aggatcttca agaaaaatag agacaatggt
    13921 actttcgaag agaactttag cagaaaattc aaatgtttta gttgtcgatg attttatgag
    13981 ggctggtggc tctattaatg gtgttatgaa tttaatgaat gagtttaaag cccatgtaaa
    14041 aggggtatca gtacttgtag aatcaaaaga agttaaacaa agattgattg aagattatac
    14101 ttccttagtg aaattatctg atgtagatga atataatcaa gagtttaacg tagaacctgg
    14161 caacagttta tctaagtttt cataaaagga gttttagtat tatgaaaatc attaacacaa
    14221 caagattacc ggaagcactt ggaccatatt cgcatgcaac agttgtaaat ggtatggttt
    14281 atacttctgg tcagattcca ttgaatgttg atgggaaaat cgtaagcgct gatgttcaag
    14341 cacagacaaa acaagtttta gaaaatttaa aggttgtttt ggaagaagca ggatctgatt
    14401 tgaattctgt tgcgaaagcg accattttca ttaaagatat gaatgatttc caaaagataa
    14461 atgaagtgta tggtcaatat tttaatgaac acaagccagc gcgtagttgt gtagaggttg
    14521 cgcgtttgcc aaaagatgtg aaagtagaaa ttgaattagt aagtaaaatt aaggaattat
    14581 aattttcgat taatatgttt aatcaagctt ctaaataaaa cagagagata tatactatag
    14641 gggggctcac tacatgaaag tgacagatgt aagacttaga aaaatacaaa cagatggacg
    14701 aatgaaagca ctcgtttcca ttacattaga tgaagctttc gtaattcatg atttacgtgt
    14761 aattgaagga aactctggct tgttcgttgc aatgccaagt aaacgtacac cagatggtga
    14821 attccgcgac atcgcgcatc ctattaattc agatatgaga caagaaattc aagatgcagt
    14881 gatgaaagta tatgatgaaa cagatgaagt agtaccagat aaaaacgcta catcagaaga
    14941 ttcagaagaa gcttaatcaa ttttatattt agcgatgtaa tacatttgca ataagttgat
    15001 ttgatactgt cgataaagca taaagctttg tcggca
//
LOCUS       DALMNS010000074        14733 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.074, whole genome shotgun sequence.
ACCESSION   DALMNS010000074 DALMNS010000000
VERSION     DALMNS010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 14733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14733
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.074"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            30..458
                     /locus_tag="O6Y56_001866"
     CDS             30..458
                     /locus_tag="O6Y56_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575116.1"
                     /translation="MTRSALKPFKNKRVMVTGRIQRVLFKNYLDRHSTFKPNVRILLK
                     DVFVSGVSIDHLWLYETNKYYALAMELIHQRVKFSANVVPYYKINRNNNLFVQDYGIK
                     RKSRLITEEAYNQNNQYQDKIYEKLPDIDFRLEDFYSKEN"
     gene            complement(667..1173)
                     /locus_tag="O6Y56_001867"
     CDS             complement(667..1173)
                     /locus_tag="O6Y56_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5575117.1"
                     /translation="MAHIIRRVSIKDVENFISMLAKIYDESPYMFYTPGEYDPSVTSA
                     SKQLEEYITSPHKVIFVAESDEQLVGFAFVNTTPFQRIKHVAKIDLGVKKLYQHRGIG
                     QALLDAIMAWCLNNQIHRIEANVPLNNQPALELFKSADFQIEGVLKDKLFIDGKYYDD
                     YMMAKILN"
     gene            1286..2209
                     /gene="graX"
                     /locus_tag="O6Y56_001868"
                     /gene_synonym="apsX"
     CDS             1286..2209
                     /gene="graX"
                     /locus_tag="O6Y56_001868"
                     /gene_synonym="apsX"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="auxiliary protein GraX/ApsX"
                     /protein_id="HDB5575118.1"
                     /translation="MKPKVLLAGGTGYIGKYLSEVIENDAELFAISKYPDNKKTDDVE
                     MTWIQCDIFHYEQVVAAMNQIDIAVFFIDPTKNSAKITQSSARDLTLIAADNFGRAAA
                     INQVKKVIYIPGSRYDNETIERLGAYGTTVETTNLVFKRSLVNVELQVSKYDDVRSTM
                     KVVLPKGWTLKNVVNHFIAWMGYTKGTFVKTEKSHDQFKIYIKNKVRPLAVFKIVETA
                     DGIITLILLSGSLVKKYTVNQGKLEFRLIKESAVVYIHLYDYIPRLFWPIYYFIQAPM
                     QKMMIHGFEVDCRIKDFQSRLKSGENMKYTK"
     gene            2225..2899
                     /gene="graR"
                     /locus_tag="O6Y56_001869"
                     /gene_synonym="apsR"
     CDS             2225..2899
                     /gene="graR"
                     /locus_tag="O6Y56_001869"
                     /gene_synonym="apsR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor
                     GraR/ApsR"
                     /protein_id="HDB5575119.1"
                     /translation="MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFN
                     PEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSRDNPMDQVMSMELGADDYMQKPF
                     YTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDQTIFLSKTEMIIL
                     EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGK
                     GYMAHE"
     gene            2892..3932
                     /gene="graS"
                     /locus_tag="O6Y56_001870"
                     /gene_synonym="apsS"
     CDS             2892..3932
                     /gene="graS"
                     /locus_tag="O6Y56_001870"
                     /gene_synonym="apsS"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase GraS/ApsS"
                     /protein_id="HDB5575120.1"
                     /translation="MNNLKWVAYFLKSRMNWIFWILFLNLLMLGISLIDYDFPIDSLF
                     YIVSLNLSLTMIFLILTYFKEVKLYKHFDKDKEIEEIKHKDLAETPFQRHTVDYLYRQ
                     ISAHKEKVVEQQLQLNMHEQTITEFVHDIKTPVTAMKLLIDQEENQERKQALLYEWSR
                     INSMLDTQLYITRLESQRKDMYFDYVSLKRMVIDEIQLTRHISQVKGIGFDVDFKVDD
                     YVYTDIKWCRMIIRQILSNALKYSENFNIEIGTELNDQHVSLYIKDYGRGISKKDMPR
                     IFERGFTSTANRNETTSSGMGLYLVNSVKDQLGIHLQVTSTVGKGTTVKLIFPLQNEI
                     VERMSEVTNLSF"
     gene            4076..4837
                     /gene="vraF"
                     /locus_tag="O6Y56_001871"
     CDS             4076..4837
                     /gene="vraF"
                     /locus_tag="O6Y56_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein VraF"
                     /protein_id="HDB5575121.1"
                     /translation="MAILEVKQLTKIYGTKKMAQEVLRDINMSIEEGEFIAIMGPSGS
                     GKTTLLNVLSSIDYISQGSITLKGKKLEKLSNKELSDIRKHDIGFIFQEYNLLHTLTV
                     KENIMLPLTVQKLDKEHMLNRYEKVAEALNILDISDKYPSELSGGQRQRTSAARAFIT
                     LPSIIFADEPTGALDSKSTQDLLKRLTRMNEAFKSTIIMVTHDPVAASYANRVVMLKD
                     GQIFTELYQGDDDKHTFFKEIIRVQSVLGGVNYDL"
     gene            4827..6716
                     /gene="vraG"
                     /locus_tag="O6Y56_001872"
     CDS             4827..6716
                     /gene="vraG"
                     /locus_tag="O6Y56_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease VraG"
                     /protein_id="HDB5575122.1"
                     /translation="MTFNEIIFKNFRQNLSHYAIYLFSLITSVVLYFSFVALKYAHKL
                     NMTESYPIIKEGSQVGSYFLFFIIIAFLLYANVLFIKRRSYELALYQTLGLSKFNIIY
                     ILMLEQLLIFIITAILGIIIGIFGSKLLLMIVFTLLGIKEKVPIIFSLRAVFETLMLI
                     GVAYFLTSAQNFILVFKQSISQMSKNNQVKETNHNKITFEEVVLGILGIVLITTGYYL
                     SLNIVQYYDSIGTLMFILLSTVIGAYLFFKSSVSLVFKMVKKFRKGVISVNDVMFSSS
                     IMYRIKKNAFSLTVMAIISAITVSVLCFAAISRASLSSEIKYTAPHDVTIKDQQKANQ
                     LASELNNQKIPHFYNYKEVIHTKLYKDNLFDVKAKEPYNVTITSDKYIPNTDLKRGQA
                     DLFVAEGSIKDLVKHKKHGKAVIGTKKHHVNIKLRKDINKIYFMTDVDLGGPTFVLND
                     KDYQEIRKYTKAKHIVSQFGFDLKHKKDALALEKAKNKVDKSIKTRSEAISSISSLTG
                     ILLFVTSFLGITFLIAVCCIIYIKQIDETEDELENYSILRKLGFTQKDMARGLKFKIM
                     FNFGLPLVIALSHAYFTSLAYMKLMGTTNQIPVFIVMGLYICMYAVFAVTAYNHSKRT
                     IRHSI"
     gene            7441..8058
                     /locus_tag="O6Y56_001873"
     CDS             7441..8058
                     /locus_tag="O6Y56_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 domain-containing protein"
                     /protein_id="HDB5575123.1"
                     /translation="MFSKKKDKFMVQLEEMVFNLDRAAIEFGKMDFNTHLDLKAYSDN
                     IKTYESHGDELVHQVITDLNQTFITPIEREDILSLCDAIDDVLDAIEETAAMFEMYSI
                     EYTDEYMAEFVDNIQKAVAEMKLAVGLLVDKKLSHMRIHSINIKEFETNCDGILRQSI
                     KHIFNSETDPITLIKIKDIYESMEEIADKCQIVANNFETIIMKNS"
     gene            8074..9081
                     /locus_tag="O6Y56_001874"
     CDS             8074..9081
                     /locus_tag="O6Y56_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDB5575124.1"
                     /translation="MSYIIIVTIAVVIFSLIFDFINGFHDTANAVATAVSTRALTPKT
                     AILMAAVMNFIGALTFTGVAGTITKDIVDPFKLENGLVVVLAAILAAIIWNLATWFYG
                     IPSSSSHALIGSIAGAAIASEGSFGVLHYQGFTKIIIVLIVSPIIAFCVGFLMYSIFK
                     VIFKNANLTRANRNFRFFQIFTAALQSFSHGTNDAQKSMGIITLALIVANVQNDGSVE
                     PQLWVKFACATAMGLGTAIGGWKIIKTVGGNIMKIRPANGAAADLSSALTIFVASSLH
                     FPLSTTHVVSSSILGVGASNRAKGVKWSTAQRMIITWVITLPISALLAGLLFYILNLF
                     F"
     gene            complement(9667..10464)
                     /locus_tag="O6Y56_001875"
     CDS             complement(9667..10464)
                     /locus_tag="O6Y56_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HDB5575125.1"
                     /translation="MKKLAFAITATSGAAAFLTHHDAQASTQHTVQSGESLWSIAQKY
                     NTSVESIKQNNQLDNNLVFPGQVISVGGSDAQNTSNTSPQAGSASSHTVQAGESLNII
                     ASRYGVSVDQLMAANNLRGYLILPNQTLQIPNGGSGGTTPTATTGSNGNASSFNHQNL
                     YTAGQCTWYVFDRRAQAGSPISTYWSDAKYWAGNAANDGYQVNNTPSVGSIMQSTPGP
                     YGHVAYVERVNGDGSILISEMNYTYGPYNMNYRTIPASEVSSYAFIH"
     gene            10825..11469
                     /locus_tag="O6Y56_001876"
     CDS             10825..11469
                     /locus_tag="O6Y56_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HDB5575126.1"
                     /translation="MSQNTNHSYYHQNQHAQSISKVWLYFMYYWIIFGIGCYLGQFLP
                     LSWRQPLSFGLLIIILATLVFERARRFGLIISHIYAVVIGLLSYATFTTYLQNLGPDI
                     FYKNIALAIFAFIAFGIIGYFFVGDASSIGKYLFVTLITLIIASLIGIFLQNPIFYTI
                     ITVVSLLLFLLYTLYDFNRLKRGDYSPREMGFNLFINLLNIIKDILYLANMFRR"
     gene            12167..14317
                     /locus_tag="O6Y56_001877"
     CDS             12167..14317
                     /locus_tag="O6Y56_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDB5575127.1"
                     /translation="MAKSCLHILTNNEYATTRCQDGIVLFWPIDGEIELQKFRKSKII
                     EDDIYIINHLDVFSIKNNKKTIMLYLSSDWFAELGFTFFNYHYTAKLIKSSYNLKCLL
                     LKLTYRYLDNQPLNDADVRKLQDIIKIIAKEASMDKKIAQNQCRYAYYGDLRDELEYI
                     YQNVNQRLTLKSVADKLFVSKSNLSSQFHLLMGMGFKKYIDTLKIGKSIEILLTTDST
                     ISNISEHLGFSSSSTYSKMFKSYMDITPNEYRNLSKYNKCLMLKPEPLVGKMVQEVKE
                     IILNYIEHYKNHLTDVIHIDEDKFETPKLFQTVIQINTFTEMKLVFLEGIFKTLLNKN
                     SQVVFFIMPSILKSKNTMSEEEKFAIIKTIIESDLKIAFNINDIETTYYVEEAFMSVF
                     RQISPNELSNHNNYEVHFVFDLSLMEIRTIYRMILKLHNIMLNVKLGLNITCLFEKPS
                     VFKSLVSQIKRLKFDSLIIDNANLSSPYLMGESDELLLKNILHFKNLKQVINELDIEQ
                     EKLIFLNVENHKLINNKERDLSNSAPLIYKTLSALYHNFDGFGLNIFDNHQAFNAMHL
                     YDKNGFKTTLGLILEKFIEYVSKPKYENSYYSIFDIENYYCLVIYDWRVIESETIMSN
                     FEDSQVYINFKNNVLNDKYLIVIETLDENSGNINHLISKELRDKYEWNPSLLSKIDNY
                     LKPAIEIKEHNFSNNSLNINVTFNALYIIKIGKK"
     gene            14463..>14733
                     /gene="sarX"
                     /locus_tag="O6Y56_001878"
     CDS             14463..>14733
                     /gene="sarX"
                     /locus_tag="O6Y56_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001090984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarX"
                     /protein_id="HDB5575128.1"
                     /translation="MNTEKLETLLGFYKQYKALSEYIDKKYKLSLNDLAVLDLTMKHC
                     KDEKVLMQSFLKTAMDELDLSRTKLLVSIRRLIEKERLSKVRSSKD"
BASE COUNT         5407 a         1818 c         2464 g         5044 t
ORIGIN      
        1 agtgatttga aataaggttg tgaaagggaa tgacaaggtc agcattaaaa ccatttaaaa
       61 ataaacgcgt tatggttact ggacgtatac aacgtgtttt gtttaaaaat tatttagata
      121 gacatagcac atttaagccg aatgtaagga tattattaaa agatgtattt gtttcaggtg
      181 tatcaataga tcatttatgg ttatatgaga caaataaata ctatgcattg gcaatggaac
      241 ttattcatca acgagtaaaa tttagtgcga atgttgtacc atattacaaa ataaatagaa
      301 ataataattt attcgtacaa gattatggaa ttaagcgtaa aagtaggtta attactgaag
      361 aagcttacaa tcaaaacaat cagtatcagg ataagatata tgaaaaatta ccggatatag
      421 attttagact cgaagatttt tatagtaagg aaaactaaac aacatatata aagcaccact
      481 aatcgtagtt gatagttaat caattacaca ttagtggtgt tttattttga atttaaattt
      541 gataaatgaa taagagtgca cgtatttatt tgagattaga taacattgat aagtatgagt
      601 aatgtattag gtaaccatta aattcgttgt tatacgattc tgatacaaga ttatgataaa
      661 atagctttaa ttaagaattt tagccatcat atagtcatca taatatttac catcgataaa
      721 taacttatct tttaaaacgc cttcgatttg aaaatcggca cttttaaaaa gctcgagggc
      781 aggttggtta ttgagtggta catttgcttc aattcggtgt atttgattat ttaaacacca
      841 agccataatg gcatcaagaa gtgcttggcc aattccacga tgttgatata atttctttac
      901 acctaaatca attttagcaa catgtttaat gcgttgaaat ggtgtcgtat taacaaaggc
      961 aaagccaacg agttgttcat cactttcagc aacaaagatg actttatgtg gagaagtgat
     1021 atattcttct aattgtttac tagctgatgt gacgctagga tcatattctc ctggtgtgta
     1081 gaacatatac ggagattcat cgtatatttt cgctaacatt gaaatgaaat tttctacatc
     1141 tttgatacta actctacgta taatatgggc cataaaaagc ctccagtatt ttgaaatttt
     1201 aaaacatttg ctactattat aatatatatg taactaaaag gtggagtaat atgttttttg
     1261 gttacagttt aaaggagtat tttagatgaa acctaaagtt ttattagcag gtggaacagg
     1321 atatattggt aagtatttaa gtgaagtgat tgaaaatgat gctgaacttt ttgctatatc
     1381 aaaatatcca gacaataaaa aaacagatga tgttgaaatg acttggattc agtgtgatat
     1441 atttcattac gaacaggttg ttgccgcaat gaatcaaata gatattgctg tattctttat
     1501 cgacccaaca aagaattctg ccaaaataac acaatcatca gcaagagatt taacattaat
     1561 cgcagcagat aattttggtc gagcagcggc tatcaatcaa gtaaaaaaag taatctacat
     1621 acctgggagt cgttatgata atgaaacaat tgaacgccta ggtgcatatg gtacaactgt
     1681 agaaacaaca aatttagttt ttaaacgttc tttagttaat gtagaattac aagtttcaaa
     1741 gtatgatgat gttagatcaa cgatgaaggt agttttacca aagggatgga cattaaagaa
     1801 cgttgtaaac cactttattg catggatggg ttatactaaa ggaacttttg tgaaaacaga
     1861 aaaatcacat gatcaattta agatatatat taagaataag gtacgaccgc tcgcagtatt
     1921 taaaatagta gaaacagctg atggaataat aactttaatt ttattgagtg gaagtttagt
     1981 gaaaaaatat acagttaatc aagggaagtt agaatttaga ttaatcaaag agtcggcagt
     2041 cgtttatata catctatacg attatatccc tcgattattt tggccgattt attactttat
     2101 acaagcacca atgcaaaaaa tgatgattca tggctttgaa gttgactgcc ggattaaaga
     2161 ttttcaaagt cgattaaaat caggagaaaa tatgaaatat actaaatgat attgggtgat
     2221 atggatgcaa atactactag tagaagatga caatactttg tttcaagaat tgaaaaaaga
     2281 attagaacaa tgggatttta atgttgctgg tattgaagat ttcggcaaag taatggatac
     2341 atttgaaagt tttaatcctg aaattgttat attggatgtt caattaccta aatatgatgg
     2401 gttttattgg tgcagaaaaa tgagagaagt ttccaacgta ccaatattat ttttatcatc
     2461 tcgtgataat ccaatggatc aagtgatgag tatggaactt ggcgcagatg attatatgca
     2521 aaagcctttt tatacaaatg tattaattgc taaattacaa gcgatttatc gacgagtgta
     2581 tgaatttact gctgaagaaa aacgcacgtt aacatggcaa gatgccatta tagatctatc
     2641 aaaagatagt atacaaaaag gtgatcagac gattttcctg tctaaaacag aaatgattat
     2701 attagaaatt cttattacca aaaaaaatca aatcgtttcg agagatacaa ttatcactgc
     2761 attatgggat gatgaagcat ttgttagtga taatacgtta acagtaaatg tgaatcgttt
     2821 acgaaaaaaa ttatctgaaa taagtatgga tagtgcaatc gaaacaaaag taggaaaagg
     2881 atatatggct catgaataat ttgaaatggg tagcttattt tttgaaatct cgcatgaact
     2941 ggatattttg gatattgttt ttaaacttgc ttatgttagg cattagtcta atcgattatg
     3001 attttccaat agacagttta ttttatattg tttctttgaa tttaagttta acaatgattt
     3061 ttcttatatt gacatatttt aaagaagtaa aattatataa gcattttgac aaagataaag
     3121 aaatagaaga aattaaacat aaagatttag cggaaacgcc atttcaacgt catacagttg
     3181 attatttata tcgtcaaatc tcagcgcaca aagaaaaggt tgttgagcaa cagttacaat
     3241 tgaacatgca tgaacaaacc attacagaat ttgtgcacga cataaaaaca cctgtgacag
     3301 ccatgaaatt attaattgat caagaagaaa atcaagaaag aaaacaggca ttactatatg
     3361 aatggtctcg tataaactcg atgctagata cacaactgta tattactaga ttagaatctc
     3421 agcgcaaaga tatgtatttt gattacgtgt cacttaaacg catggtcatt gatgaaatac
     3481 aattaacaag acatattagt caggttaaag gtattggttt tgatgttgac tttaaagtgg
     3541 atgattatgt ttatacagat ataaaatggt gccgtatgat tattagacaa attttgtcaa
     3601 acgcactgaa atatagtgag aattttaata ttgaaattgg gacagaatta aatgatcaac
     3661 atgtttcgtt atatattaaa gactatggca gaggtattag taaaaaagat atgccacgaa
     3721 tatttgaacg aggatttacg tcaacggcta acagaaatga aacgacgtct tcaggtatgg
     3781 gtttatattt agtaaatagt gtaaaggatc aattaggtat tcatctgcaa gtcacgtcga
     3841 ctgttggtaa ggggacaact gtcaaattga ttttcccatt acaaaatgaa attgttgaac
     3901 gcatgtcgga agtgacaaat ttgtcatttt aaacatgcgt tttgttactt agaattgata
     3961 catcaatgca gcttcaacgt tataataaga tagatgttag tcatatgtta aattgaagat
     4021 acaagtgcca aagcctaaag gaaatgaagt taagataaat tataggagtg ttaaagtggc
     4081 aattttagaa gtaaaacaat taacaaaaat atatggaact aaaaaaatgg cacaagaagt
     4141 gttgcgagat atcaatatgt ctattgaaga aggcgagttt attgctatta tgggtccctc
     4201 tggatctggg aaaacgacat tattaaatgt tttaagttca attgattata tttcacaagg
     4261 ttctattaca ttaaaaggaa aaaaattaga aaagctttca aacaaagaat tatctgatat
     4321 acgcaagcat gatattggtt ttatttttca agagtataat ttactgcata cattgactgt
     4381 taaagaaaac ataatgttac cactaacggt acagaagtta gataaagaac acatgttaaa
     4441 tcgttatgaa aaagtagcag aagcattaaa tatattggat attagtgata aatatccttc
     4501 tgaattgtct ggtggacaaa gacaacgaac atctgctgca agagcgttta ttacattacc
     4561 ttctattata tttgctgacg aaccaacagg tgcactggat tctaaaagta ctcaagattt
     4621 attaaaacga ttaacaagaa tgaatgaagc atttaagtct acaattatta tggtaacgca
     4681 tgatcctgtt gcagcaagtt atgccaatag agtagtgatg ctaaaagatg gtcaaatttt
     4741 cactgaatta taccaagggg atgacgataa acataccttt ttcaaagaaa taatacgtgt
     4801 acaaagtgtt ttaggtggcg ttaattatga cctttaacga gataatattt aaaaatttcc
     4861 gtcaaaattt atcgcattat gccatctatc ttttttcatt aattacgagt gtagtattgt
     4921 attttagctt tgtagcatta aaatacgctc ataaactaaa catgacagag tcatatccaa
     4981 ttataaagga aggctcacaa gtcggaagct acttcctatt tttcatcata attgcatttt
     5041 tgttatatgc caatgtgtta tttattaaac gacgaagtta tgagcttgca ttatatcaaa
     5101 cattaggttt atctaaattc aacattattt atatactaat gctcgaacaa ttactaatat
     5161 ttataattac ggcaatatta ggtattatta ttggtatttt tggttcgaaa ctgttattaa
     5221 tgattgtctt tacattatta ggaattaaag aaaaggttcc aattattttt agtttgaggg
     5281 cggtatttga aacattaatg ttaatcggtg tcgcttattt tttaacatct gctcaaaatt
     5341 ttatattagt gttcaaacaa tctatttcac agatgtcaaa gaataaccag gttaaagaaa
     5401 caaatcataa taaaattaca tttgaagagg ttgttttagg catcttaggt atagtattga
     5461 ttaccacagg atactatcta tctttgaaca ttgttcaata ttatgattct atcggtacac
     5521 ttatgtttat tttattgtca actgtgattg gggcatactt attttttaaa agctctgttt
     5581 ctctagtttt taaaatggtg aagaagttta gaaaaggtgt tataagtgta aatgatgtca
     5641 tgttctcatc atctattatg tatcgtatta agaaaaatgc tttttcactt acggtcatgg
     5701 caatcatttc agcgattact gtttcagttc tttgctttgc tgctataagt agagcgtcct
     5761 tatcaagtga aataaaatat actgcaccac acgacgttac aattaaagac caacaaaaag
     5821 ctaatcaatt agcaagtgaa ttaaacaatc aaaaaattcc tcatttttat aattataaag
     5881 aagtaattca tacgaaattg tataaagata atttatttga tgtaaaagcg aaagaaccat
     5941 acaatgtaac aattactagt gataaataca tccctaatac tgatttgaaa cgtgggcaag
     6001 ctgatttgtt tgtagcggaa ggttctatca aagatttagt gaaacataag aagcatggta
     6061 aagcggttat aggaacgaaa aagcaccatg tgaatattaa gttacgtaaa gatattaata
     6121 aaatctattt tatgacagat gttgatttag gtggaccaac gtttgtctta aatgataaag
     6181 actatcaaga aataagaaaa tatacaaagg caaagcatat cgtctctcaa tttggattcg
     6241 atttgaaaca taaaaaagat gctttagcat tagaaaaagc gaaaaataaa gttgataaat
     6301 ctattaaaac aagaagtgaa gcgataagct caatatcaag tttaaccgga atattattat
     6361 ttgtaacatc atttttaggt attacattct tgattgctgt atgttgcatt atatacatta
     6421 agcaaataga tgaaaccgaa gatgaattag agaattatag tatattgaga aagcttggat
     6481 ttacacaaaa agatatggca aggggactaa agtttaaaat tatgtttaat tttgggttac
     6541 ctttagttat tgcactatca catgcatatt ttacatcatt agcatatatg aaattaatgg
     6601 gtacaacgaa tcaaataccg gttttcatag taatgggatt atacatttgt atgtatgctg
     6661 tttttgcagt gacggcttat aatcattcca agcgaacaat tagacattcc atataaaata
     6721 tacagatggc tttcagtaga gtagtggatt cggattcacg aactatactg ggagcttttt
     6781 attataaatg aagagaagtt atatttttag catgtatagt tgaatactgg gttaaaatac
     6841 catattaata atgaagtaaa ggtatgagtg attatgaaag tgttttgaat gaaatatatt
     6901 taattggtga tgcttttaat tgaaaagatt aacaggattc aactttgtaa attgtattaa
     6961 atgtgagaaa ataaaagtat attcattgag agatatatga gtcaatgatc gttttaaaca
     7021 agataagtgt attttaatat gtaaaagtta tgtaataaat attgtatcgt tgcaaatttc
     7081 ccaactatat tcatttacaa tttttagagt tgtatagata aaaaattgcc tatacaataa
     7141 ctttttcaaa acaaatgcct actactattt aaattttatg taaaagttaa gtttcggaat
     7201 tgttaaaaat ttgtaaattg aattgtggga ttgtaaattt tgtgctattt tcatataagg
     7261 gcaaatacag taaattgttt actgtgaggc atttttgaaa ttaatatcag tacactaaaa
     7321 ttatactgac gattgataat aacaaatttg tatcattagt ttgtaaattc acttgtctta
     7381 atttgaaaca aattataact gaatgtgatt ggtgacaatc gcttaaatgg aggattttaa
     7441 atgtttagta agaaaaaaga taagtttatg gttcaattag aagagatggt tttcaatctg
     7501 gatcgtgctg ctattgaatt cggtaaaatg gatttcaata ctcatttaga tttaaaagca
     7561 tactcagaca acattaaaac ttatgagtca catggtgacg aattagtaca tcaagtaatt
     7621 actgatttaa atcaaacatt tatcacacca attgaacgtg aagatatttt atcattatgt
     7681 gatgcaattg atgatgtttt agatgcaatt gaagaaacgg cagctatgtt tgaaatgtat
     7741 tcaatcgaat acacagatga atatatggct gagtttgttg ataacattca aaaagcagtt
     7801 gcagaaatga aacttgctgt cggcttatta gtcgataaaa aattatcaca tatgcgtatt
     7861 cattcaatta atattaaaga atttgaaaca aactgtgatg gtattttaag acagtcaatt
     7921 aaacatattt tcaatagcga aacagatcca atcacattaa ttaaaataaa agatatttat
     7981 gaaagcatgg aagaaattgc tgataaatgt caaatcgtag caaataattt tgaaactatt
     8041 attatgaaaa atagctaagg ggagtatata tttatgtcat atataatcat cgtcactata
     8101 gctgtagtta ttttctcgct gatatttgac tttatcaatg gattccatga tacagccaat
     8161 gcagtagcta ctgctgtatc tactagagcg ttaacgccta aaacggcaat tttaatggca
     8221 gcagtgatga actttatagg tgctttaaca tttacgggcg ttgcaggcac cattactaaa
     8281 gacattgtcg atccatttaa attggaaaat ggattagttg ttgtgttagc tgctatactt
     8341 gcggctatta tttggaattt agctacttgg ttttacggaa ttccaagttc gtcttcacat
     8401 gcacttatag gttcaattgc gggtgcagca atcgcatctg aaggctcatt tggagtgtta
     8461 cattaccaag gtttcacaaa aattattatt gtattaatcg tttcaccgat tatcgcattt
     8521 tgtgttggtt tcttgatgta ttcaattttt aaagttatct ttaaaaatgc aaatttaaca
     8581 agagcgaatc gtaactttag atttttccaa attttcacag cagcgttaca atcattctct
     8641 cacggtacga atgatgcgca aaaatcaatg ggtattatta cgttggcatt gattgttgct
     8701 aatgtacaga atgatggtag cgttgaacca cagctatggg taaaatttgc ctgtgcgaca
     8761 gcaatggggc ttggtactgc aattggtggc tggaaaatta tcaaaactgt aggtggtaat
     8821 attatgaaaa tacgtcctgc aaatggtgca gcggccgatt tatcatctgc attaacaatt
     8881 tttgttgcgt catcgctaca tttcccatta tcaacaactc acgttgtgtc atcatcaatc
     8941 ttaggtgttg gtgcttctaa ccgagctaaa ggtgtaaaat ggagtactgc acaacgaatg
     9001 atcattacat gggtgattac attacctatt tcagcattgt tagcaggttt attattctat
     9061 atacttaact tatttttcta attgaaaata aaactaaact gaacttcagt atcacaaaaa
     9121 tatggtggta ttgaagttca ttttttatgt aaatagataa catattttat agaatttaca
     9181 tagaatgacc aagacaaagc attttaattt gaggctatgt tataaatgta ttccatggaa
     9241 cataatcagt taggtcatta aatcatatgt aagagcaaaa taatgattta atagtttata
     9301 ttcttcaatg aatgaataat taaatagcta tcaacttgtt taattaacct aaattgtatt
     9361 ggactttatt taatataaat ttgtatatgt agacgaaaaa gcgtaaaata ctggtataac
     9421 aaattaaatc attatatagt cagcttagtt gcattatttt gatttttaat atattatgca
     9481 tttaatttaa tcaaataggt aggttattat tttttaccta actaccattc atacaaaata
     9541 taaataagta tgatagggaa gggtgagata attttttgta ccaaaatgaa aatttttttc
     9601 aaaaataaaa aactagcaat ctcacatgat gtgaattgct agtatatatc agtacaattt
     9661 atttaattaa tggatgaatg catagctaga aacttctgaa gctggaatag tacgatagtt
     9721 catattgtat ggaccatatg tgtaattcat ttcagaaatc aagatactac catcaccatt
     9781 gacacgttca acataagcaa catgaccata tggaccaggt gtgctttgca taattgaacc
     9841 aactgatggt gtgttgttta cttggtaacc atcattagct gcgttaccag cccaatactt
     9901 agcgtctgac caatatgtgc taattggact accagcttga gcacgacggt caaatacgta
     9961 ccatgtacat tgaccagcag tgtataaatt ttggtgatta aaagatgatg cattgccatt
    10021 gctacctgtt gtagctgttg gtgttgtacc acctgatcca ccattaggaa tttgtaatgt
    10081 ttggttaggc agaattaaat aaccacgtaa gttattggct gccattaatt gatcaactga
    10141 aacaccatat ctgctagcaa tgatatttaa tgattcacca gcttgtacag tatgagatga
    10201 tgctgaacca gcttgtggag aagtgtttga cgtattttga gcatcacttc cacctactga
    10261 gataacttga ccagggaata ccaagttgtt atctaattgg ttattttgtt taatactctc
    10321 taccgaagtg ttgtattttt gagcaatact ccataatgat tcaccagatt gtactgtatg
    10381 ttgtgtagaa gcttgtgcat catgatgcgt taaaaatgca gctgcaccag atgttgctgt
    10441 tattgcaaat gctaattttt tcaaagggac tcctccttaa aattaagatt tactactttt
    10501 aaaaattatt aagacaattt atatagtaaa ttaagttttc gttttatatt acgctttcca
    10561 tattatcaaa aataagtagc tttgtgtggt ttgttattat cttgtaatat tattaacatt
    10621 ttaggatatc ggttcatatt tttataaatg ttgatttgat agtgtataaa agcgttttag
    10681 tgattttaac taattataaa aaattatatt ttgtaacatt gtaaaatgta aaatcactat
    10741 acttgttaaa ggttatttct tttgatgaag caaaatttac tgtaaaattt gacgcataaa
    10801 acgacagtag aaggaggaat tattttgtcg caaaatacaa atcattcata ttatcatcaa
    10861 aaccaacatg ctcaatcaat aagtaaagtg tggctttatt ttatgtatta ctggattata
    10921 tttggtatag gatgctatct aggtcagttt ttaccattaa gttggcgaca acccttgtca
    10981 tttggattac tgattattat tttagcaaca cttgtttttg aaagagcgag acggttcggt
    11041 ttaattattt cacatattta cgctgtagta attggcttat tgtcatacgc aacgtttacc
    11101 acgtatttac aaaatttagg accagatatt ttctataaaa atatcgcatt agcaattttt
    11161 gcatttatag catttggtat tattggttat ttcttcgttg gagatgcatc gagtataggc
    11221 aagtatttat tcgttacatt aataacatta attattgcga gtctaattgg tatttttctt
    11281 caaaatccta ttttttatac tattattacc gtcgttagtc tgttgttatt tctactttat
    11341 actttgtatg attttaatcg tttaaaaaga ggtgactatt caccaagaga aatgggattt
    11401 aatctattta ttaatttgtt gaatattatt aaggatatac tttatcttgc taatatgttc
    11461 agaagataaa cagttaaatt aataaagaaa tttgtataaa gttttggaat aatcaataat
    11521 gaatatcaac cttaatttgg agcgattgtc ataatttaga aatttagata gagattttac
    11581 tgataaagca ataaaaatat attaccttaa attgtaaaaa tattattaat cattgaaatg
    11641 attaactgct atagttctaa agtaaacaaa tcttagaaga taaactttaa acaggtgtac
    11701 ttgcctttct aattacactt ttattagaaa agtaaagtat agctacgtat taattttaaa
    11761 atcgaaatat taataggaat aagtatagat aatataaaca atttaatgtt agtttgagct
    11821 catctcaaaa gtagaatgtg atttaaataa gtgtttattt ttaaattgaa aatgaatata
    11881 aaactaacaa aagataatag taatacgttg tagatgtggt catttaaaat tattttgaaa
    11941 atactaaaaa gtagtgtgtt ttcaattgga tagtttaatt aaactggcta catctatttt
    12001 tgtaatattt aaatgattga tatataagtt taaaaattac ccattatata gttttattta
    12061 tttttgattt ggtattcgta ttgtgttaaa tttacgttta attaaataag ttaaatatta
    12121 tagggaatga taaaagtggt acttaaatat agaaagaggt aaagttatgg caaaatcatg
    12181 cttgcatata cttactaata atgaatatgc gacaacgcgt tgccaagatg gcatagtctt
    12241 attttggcca attgacgggg aaatcgaact acaaaaattt cgtaaaagta aaataattga
    12301 agatgatata tatattatta atcatctgga tgtatttagt attaagaata ataaaaaaac
    12361 gatcatgttg tatttgagta gcgattggtt tgcggaatta ggctttactt tctttaatta
    12421 ccactataca gcaaagttaa ttaaatcatc ctataatttg aaatgtctac tattaaaatt
    12481 gacttatcga taccttgata atcaacctct caatgacgct gatgttagaa aattacagga
    12541 tattattaaa attattgcaa aagaagcaag tatggataaa aagattgcgc aaaatcaatg
    12601 tcgatatgcc tattatggtg atttgcgtga cgagctcgaa tatatttatc aaaatgtaaa
    12661 tcaacgattg acattaaaaa gtgtcgctga taaattattt gtttcaaagt caaatttgtc
    12721 atcacaattc cacttactta tgggcatggg ttttaaaaaa tatattgata ctttgaaaat
    12781 tggtaaatcg attgaaatac tacttactac tgatagtact attagcaaca taagtgaaca
    12841 tttaggtttt agtagtagct ccacttactc taaaatgttt aaaagttata tggatataac
    12901 accgaatgaa tatcgtaatt tatcaaaata taataaatgt ttaatgctaa agccagaacc
    12961 actagtaggc aaaatggtgc aagaagtaaa agaaatcata ttgaattata ttgaacatta
    13021 taaaaaccac ctaactgatg ttatacatat tgatgaagac aaatttgaaa cacctaaatt
    13081 gtttcaaacg gttattcaaa taaatacttt tacagaaatg aaattagttt tcttagaagg
    13141 aatctttaaa accttattga ataagaacag tcaagttgtc tttttcatca tgccatcgat
    13201 tttaaaaagt aaaaatacca tgtcagaaga agaaaaattc gcaatcatta aaacaataat
    13261 tgaaagtgat ttaaagatag catttaatat aaatgatatt gaaacaactt attatgttga
    13321 agaagctttt atgagtgttt tcagacaaat atctccaaac gaattaagta atcataataa
    13381 ttacgaagtg cattttgttt ttgatttatc attgatggaa attagaacaa tttatcgaat
    13441 gatattaaaa ttacataaca tcatgttgaa tgtaaaatta ggattgaata ttacctgttt
    13501 atttgaaaaa ccttcagttt ttaaatcact agtatcacaa ataaagcgac ttaaattcga
    13561 ttcgttaata atagataatg caaatttaag tagcccttat ttgatggggg aaagtgatga
    13621 gttactattg aaaaatattt tgcattttaa aaatttaaaa caagtaatta atgaattgga
    13681 tattgaacaa gaaaagctga tttttttaaa tgttgaaaat cataaactga ttaataataa
    13741 agaacgagat ttaagtaata gtgccccatt gatttataag acattaagtg cgctgtatca
    13801 caactttgat gggtttggat tgaacatttt tgacaatcat caagcattta atgcgatgca
    13861 tctatatgac aaaaatggat ttaagacaac actaggtctt atattggaaa aatttatcga
    13921 atatgtctcg aaaccaaaat atgaaaacag ttattattct atttttgata tagagaatta
    13981 ttattgtctt gttatttatg attggcgagt gatagagagc gagacaatta tgagtaattt
    14041 tgaggatagt caagtttata taaattttaa aaacaatgtt ttaaacgata aatatctaat
    14101 tgtaatagaa acattggacg aaaatagtgg caacattaat catttgattt ctaaagaatt
    14161 aagagataaa tatgaatgga accctagttt actatctaaa attgacaact accttaaacc
    14221 agcaatcgag attaaagagc ataactttag taataattcc ttaaatatta acgttacttt
    14281 taatgcgtta tacataatta aaataggaaa aaaataacac cttgatatgt attgcaaaat
    14341 ttaatttgca tttgttggta attttgacaa cgtattaaaa acaaatgaga aagacaatgg
    14401 cagaaaaatt taagataata atgacagaag cattgtcttt atatatttgg gggtgcaaca
    14461 ttttgaatac tgagaaatta gaaacattgc ttggcttcta taaacaatat aaagcattat
    14521 ctgaatatat tgataaaaaa tataagttgt cgctaaatga tttagcagtc ttagatttaa
    14581 cgatgaagca ttgcaaagat gagaaagtac ttatgcaatc atttttaaaa actgcaatgg
    14641 atgagctaga tttaagtagg acaaaattat tagtttctat aagaagacta attgaaaaag
    14701 aaagacttag taaagttaga tcatctaaag atg
//
LOCUS       DALMNS010000075        14591 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.075, whole genome shotgun sequence.
ACCESSION   DALMNS010000075 DALMNS010000000
VERSION     DALMNS010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 14591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14591
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.075"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..143)
                     /gene="lrgA"
                     /locus_tag="O6Y56_001879"
     CDS             complement(<1..143)
                     /gene="lrgA"
                     /locus_tag="O6Y56_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antiholin-like murein hydrolase modulator LrgA"
                     /protein_id="HDB5575129.1"
                     /translation="MVVKQQKDASKPAHFFHQVIVIALVLFVSKIIESFMPIPMPASV
                     IGLV"
     gene            complement(256..996)
                     /locus_tag="O6Y56_001880"
     CDS             complement(256..996)
                     /locus_tag="O6Y56_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor LytR"
                     /protein_id="HDB5575130.1"
                     /translation="MKALIIDDEPLARNELTYLLNEIGGFEEINEAENVKETLEALLI
                     NQYDIIFLDVNLMDENGIELGAKIQKMKEPPAIIFATAHDQYAVQAFELNATDYILKP
                     FGQKRIEQAVNKVRATKAKDDNSANAIANDMSANFDQSLPVEIDDKIHMLKQQNIIGI
                     GTHNGITTIHTTNHKYETTEPLNRYEKRLNPAYFIRIHRSYIINTKHIKEVQQWFNYT
                     YMVILTNGVKMQVGRSFMKDFKASIGLL"
     gene            complement(999..2753)
                     /locus_tag="O6Y56_001881"
     CDS             complement(999..2753)
                     /locus_tag="O6Y56_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDB5575131.1"
                     /translation="MLSLTMLLLERVGLIIILAYVLMNIPYFKNLMNRRRTWKARWQL
                     CIIFSLFALMSNLTGIVIDHQHSLSGSVYFRLDDDVSLANTRVLTIGVAGLVGGPFVG
                     LFVGVISGIFRVYMGGADAQVYLISSIFIGIIAGYFGLQAQRRKRYPSIAKSAMIGIV
                     MEMIQMLSILTFSHDKAYAVDLISLIALPMIIVNSVGTAIFMSIIISTLKQEEQMKAV
                     QTHDVLQLMNQTLPYFKEGLNRESAQQIAMIIKNLMKVSAVAITSKNEILSHVGAGSD
                     HHIPTNEILTSLSKDVLKSGKLKEVHTKEEIGCSHPNCPLRAAIVIPLEMHGSIVGTL
                     KMYFTNPNDLTFVERQLAEGLANIFSSQIELGEAETQSKLLKDAEIKSLQAQVSPHFF
                     FNSINTISALVRINSEKARELLLELSYFFRANLQGSKQHTITLDKELSQVRAYLSLEQ
                     ARYPGRFNININVEDKYRDVLVPPFLIQILVENAIKHAFTNRKQGNDIDVSVIKETAT
                     HVRIIVQDNGQGISKDKMHLLGETSVESESGTGSALENLNLRLKGLFGKSAALQFEST
                     SSGTTFWCVLPYERQEEE"
     gene            complement(2999..3673)
                     /gene="scdA"
                     /locus_tag="O6Y56_001882"
     CDS             complement(2999..3673)
                     /gene="scdA"
                     /locus_tag="O6Y56_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair di-iron protein ScdA"
                     /protein_id="HDB5575132.1"
                     /translation="MINKNDIVADVVTDYPKAADIFRSVGIDFCCGGQVSIEAASLEK
                     KNVDLNELLQRLNDVEQTNTPGSLNPKFLNISSLIQYIQAAYHEPLREEFKNLTPYVT
                     KLSKVHGPNHPYLVELKETYDTFKNGMLEHMQKEDDVDFPKLIKYEQGEVVDDINTVI
                     DDLVSDHIATGQLLVKMSDLTSSYEPPIEACGTWRLVYQRLKALEVLTHEHVHLENHV
                     LFKKVS"
     gene            complement(3817..5538)
                     /gene="tarS"
                     /locus_tag="O6Y56_001883"
     CDS             complement(3817..5538)
                     /gene="tarS"
                     /locus_tag="O6Y56_001883"
                     /EC_number="2.4.1.355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000975351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(ribitol-phosphate)
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDB5575133.1"
                     /translation="MMKFSVIVPTYNSEKYITELLNSLAKQDFPKTEFEVVVVDDCST
                     DQTLQIVEKYRNKLNLKVSQLETNSGGPGKPRNVALKQAEGEFVLFVDSDDYINKETL
                     KDAAAFIDEHHSDVLLIKMKGVNGRGVPQSMFKETAPEVTLLNSRIIYTLSPTKIYRT
                     ALLKDNDIYFPEELKSAEDQLFTMKAYLNANRISVLSDKAYYYATKREGEHMSSAYVS
                     PEDFYEVMRLIAVEILNADLEEAHKDQILAEFLNRHFSFSRTNGFSLKVKLEEQPQWI
                     NALGDFIQAVPERVDALVMSKLRPLLHYARAKDIDNYRTVEESYRQGQYYRFDIVDGK
                     LNIQFNEGEPYFEGIDIAKPKVKMTAFKFDNHKIVTELTLNEFMIGEGHYDVRLKLHS
                     RNKKHTMYVPLSVNANKQYRFNIMLEDIKAYLPKEKIWDVFLEVQIGTEVFEVRVGNQ
                     RNKYAYTAETSALIHLNNDFYRLTPYFTKDFNNISLYFTAITLTDSISMKLKGKNKII
                     LTGLDRGYVFEEGMASVVLKDDMIMGMLSQTSENEVEILLSKDIKKRDFKNIVKLNTA
                     HMTYSLK"
     gene            complement(5571..7259)
                     /locus_tag="O6Y56_001884"
     CDS             complement(5571..7259)
                     /locus_tag="O6Y56_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDB5575134.1"
                     /translation="MVKSKIYIDKIYWERVQLFVEGHSENLDLEDSNFVLRNLTETRT
                     MKANDVKIDGNQFVCRFNVAILDNGYYLPEDKYLLVNEQELDYIAQLNPDVINDAYQN
                     LKPEQEEEYNELETQNGKINFLLQTYLKEFRKGGISKKTVYTVTPEISSDVNEFVLDV
                     VVTTPEVKSNYIVRKYKELRKYFRKQSFNTRQFIFKAIFNTTKFFHLKKGNTVLFTSD
                     SRPTMSGNFEYIYNEMLRQNLDKKYDIHTVFKANITDRRGIIDKFRLPYLLGKADYIF
                     VDDFHPLIYTVRFRRSQEVIQVWHAVGAFKTVGFSRTGKKGGPFIDSLNHRSYTKAYV
                     SSETDIPFYAEAFGIKEKNVVPTGVPRTDVLFDEAYATQIKQEMEDELPIIKGKKVIL
                     FAPTFRGSGHGTAHYPFFKIDFERLARYCEKNNAVVLFKMHPFVKNRLNIADKHKQYF
                     VDVSDFREVNDILFITDLLISDYSSLIYEYAVFKKPMIFYAFDLEDYITTRDFYEPYE
                     SFVPGKIVQSFDSLMDALDNEDYEGEKVIPFLDKHFKYQDGRSSERLVRNLFGS"
     gene            complement(7281..8306)
                     /locus_tag="O6Y56_001885"
     CDS             complement(7281..8306)
                     /locus_tag="O6Y56_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HDB5575135.1"
                     /translation="MINQVYQLVAPRQFEVTYNNVDIYSDYVIVRPLYMSICAADQRY
                     YTGSRDENVLSQKLPMSLIHEGVGEVVFDSKGVFNKGTKVVMVPNTPTEKDDVIAENY
                     LKSSYFRSSGHDGFMQDFVLLNHDRAVPLPDDIDLSIISYTELVTVSLHAIRRFEKKS
                     ISNKNTFGIWGDGNLGYITAILLRKLYPESKIYVFGKTDYKLSHFSFVDDVFFINKIP
                     EGLTFDHAFECVGGRGSQSAINQMIDYISPEGSIALLGVSEFPVEVNTRLVLEKGLTL
                     IGSSRSGSKDFQDVVDLYIQYPDIVDKLALLKGQEFEIATINDLTEAFEADLSTSWGK
                     TVLKWIM"
     gene            complement(8299..9015)
                     /locus_tag="O6Y56_001886"
     CDS             complement(8299..9015)
                     /locus_tag="O6Y56_001886"
                     /EC_number="2.7.7.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribitol-5-phosphate cytidylyltransferase"
                     /protein_id="HDB5575136.1"
                     /translation="MKYAGILAGGIGSRMGNVPLPKQFLDLDNKPILIHTLEKFILIN
                     DFEKIIIATPQQWMTHTKDTLRKFKISDERIEVIQGGSDRNDTIMNIVKHIESTNGIN
                     DDDVIVTHDAVRPFLTHRIIKENIQAALEYGAVDTVIDAIDTIVTSKDNQTIDAIPVR
                     NEMYQGQTPQSFNINLLKESYAQLSDEQKSILSDACKIIVETNKPVRLVKGELYNIKV
                     TTPYDLKVANAIIRGGIADD"
     gene            complement(9291..10460)
                     /locus_tag="O6Y56_001887"
     CDS             complement(9291..10460)
                     /locus_tag="O6Y56_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDB5575137.1"
                     /translation="MIKTTIKKLIEHSIYTTFKLLSKLPNKNLIYFESFHGKQYSDNP
                     KALYEYLTEHSDAQLIWGVKKGYEHIFQQHNVPYVTKFSMKWFLAMPRAKAWMINTRT
                     PDWLYKSPRTTYLQTWHGTPLKKIGLDISNVKMLGTNTQNYQDGFKKESQRWDYLVSP
                     NPYSTSIFQHAFHVSRDKILETGYPRNDKLSHKRNDTEYINGIKTRLNIPLDKKVIMY
                     APTWRDDEAIREGSYQFNVNFDIEALRQALDDDYVILLRMHYLVVTRIDEHDDFVKDV
                     SDYEDISDLYLISDALVTDYSSVMFDFGVLKRPQIFYAYDLDKYGDELRGFYMDYKKE
                     LPGPIVENQTALIDALKQIDETANEYIEARTVFYQKFCSLEDGYASQRICQTIFK"
     gene            complement(10888..12582)
                     /locus_tag="O6Y56_001888"
     CDS             complement(10888..12582)
                     /locus_tag="O6Y56_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000167965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDB5575138.1"
                     /translation="MTKTKQAIHIDNIYWERVQLYIEGHSEGVDLTSGQFVLRNLTET
                     KTLEANEMKIDGNTFICRFNVAILDDGYYLPMDKYLFVYHDQLEYIGQLNPNIIDQAY
                     AALNEEQIEEYNELTTQNGKANYVLANEAKVFRKGGVSQHTVYTITPEIASDVNEFVF
                     DIEITLPQEKSGVIATSAHWLHKQGHKASFESRSFLFKAIFNITKLLHIKRSKTILFT
                     SDSRPNLSGNFKYVYDELLRQKVDFDYDIQTVFKANITDRRKWRDKFRLPYLLGKADY
                     IFVDDFHPLIYTVRFRPSQEIIQVWHAVGAFKTVGFSRTGKKGGPFIDSLNHRSYTKA
                     YVSSETDIPFYAEAFGIREENVVPTGVPRTDVLFDEAYATQIKQEMEDELPIIKGKKV
                     ILFAPTFRGNGHGTAHYPFFKIDFERLARYCEKHNAVVLFKMHPFVKNRLNISREHRQ
                     YFIDVSDHREVNDILFVTDLLISDYSSLIYEYAVFKKPMIFYAFDLEDYITTRDFYEP
                     YESFVPGKIVQSFDALMDALDNEDYEVEKVVPFLDKHFKYQDGRSSERLVKDLFRR"
     gene            complement(12604..13629)
                     /locus_tag="O6Y56_001889"
     CDS             complement(12604..13629)
                     /locus_tag="O6Y56_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HDB5575139.1"
                     /translation="MINQVYQLVAPRQFDVTYNNVDIYGNHVIVRPLYLSICAADQRY
                     YTGRRDENVLRKKLPMSLVHEAVGEVVFDSKGVFEKGTKVVMVPSTPTEQHHIIAENY
                     LASSYFRSSGYDGFMQDYVVMAHDRIVPLPNDIDLSTISYTELVSVSYHAIQRFERKS
                     IPLKTSFGIWGDGNLGYITAILLRKLYPEAKIYVFGKTDYKLSHFSFVDDIFTVNQIP
                     DDLKIDHAFECVGGKGSQVALQQIVEHISPEGSIALLGVSELPVEVNTRLVLEKGLTL
                     IGSSRSGSKDFEQVVDLYRKYPDIVEKLALLKGHEINVCTMQDIVQAFEMDLSTSWGK
                     TVLKWTI"
     gene            complement(13622..14338)
                     /locus_tag="O6Y56_001890"
     CDS             complement(13622..14338)
                     /locus_tag="O6Y56_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HDB5575140.1"
                     /translation="MIYAGILAGGIGSRMGNVPLPKQFLDIDNKPILIHTIEKFILVS
                     EFNEIIIATPAQWISHTQDILKKYNITDQRVKVVAGGTDRNETIMNIIDHIRNVNGIN
                     NDDVIVTHDAVRPFLTQRIIKENIEVAAKYGAVDTVIEAIDTIVMSKDKQNIHSIPVR
                     NEMYQGQTPQSFNIKLLQDSYRALSSAQKEILSDACKIIVESGHAVKLVRGELYNIKV
                     TTPYDLKVANAIIQGDIADD"
BASE COUNT         4561 a         2716 c         2052 g         5262 t
ORIGIN      
        1 actaaaccga ttactgatgc aggcatagga attggcataa atgattcaat tattttcgat
       61 acaaagagta ctaaagcaat tacaatgact tggtgaaaaa agtgtgctgg ttttgatgcg
      121 tctttttgtt gtttcacgac cattgcctcc tacgtttgat ttaactaaag tatagatggc
      181 tcacttcgat ttgcgtgaat tttagtccga aatacaaaat atcataggta aaatgcataa
      241 aaaaaaggat tactgttaaa gtaatcctat cgacgcttta aaatctttca taaatgaacg
      301 tccaacttgc atcttgacac catttgtcaa tattaccata taagtataat taaaccattg
      361 ttgtacttct ttaatgtgtt tcgtgttaat aatatatgaa cgatgaatac gtatgaaata
      421 agcgggattc aatcgttttt cataacgatt caatggctct gttgtttcgt atttatgatt
      481 cgttgtatgt atggttgtaa taccattatg tgtgccaatc ccaataatat tttgttgctt
      541 taacatgtga attttatcgt caatttcaac aggtaaactt tgatcaaaat tcgccgacat
      601 atcattcgca attgcatttg cgctattatc atctttggct ttagtcgcac gaactttatt
      661 gactgcttgt tcaatacgtt tttgaccaaa cggtttcaaa atatagtctg tcgcatttaa
      721 ttcaaatgcc tgtactgcgt attggtcatg tgcagttgca aaaataatcg caggtggctc
      781 tttcatcttt tgaattttag ctcctaattc gattccattt tcatccatta aattgacatc
      841 taaaaatata atgtcatatt gatttatcag taatgcttcc aatgtttctt ttacattttc
      901 tgcctcatta atttcttcaa aaccaccaat ttcatttaat aaatatgtta attcattacg
      961 tgctaatggc tcatcatcta tgattaatgc tttcatattt attcctcctc ttgtctttca
     1021 taaggaagta cacaccaaaa agtggtaccg ctcgatgtcg attcaaattg taatgctgcg
     1081 gattttccaa ataatccttt taggcgtaag tttaaatttt ctaaagcact accagttcca
     1141 gattctgatt ctacagatgt ttctcccaac aaatgcattt tatctttaga aataccctga
     1201 ccattatctt gtacaataat acgtacatgt gttgcagttt ctttaatcac tgacacgtca
     1261 atatcgttac cttgctttcg attcgtaaac gcatgtttga tggcattttc aactaaaatt
     1321 tgaattaaaa atggtggtac aagcacatcg cgatatttgt cttcaacatt aatattgata
     1381 ttaaatcttc ctggataacg tgcttgttcg agtgataagt atgcacgcac ttgacttaac
     1441 tctttatcta aagtaatcgt atgttgcttt gagccttgta aattcgctct gaaaaaataa
     1501 ctcaattcta atagtaactc tcgtgccttt tcactattta ttctaactaa agctgaaatc
     1561 gtgttaattg aattgaagaa aaaatgtgga ctcacttgtg cctgtaatga cttaatctca
     1621 gcatctttca ataacttact ttgcgtttcg gcttcaccaa gttcaatttg gctactaaaa
     1681 atatttgcca atccttctgc aagttgacgt tccacaaaag ttaaatcatt agggtttgta
     1741 aaatacatct tcaatgtacc gacgatagaa ccatgcatct caagtggtat cacgatagct
     1801 gctctaagcg ggcaattcgg atgactacaa ccaatctctt ctttagtatg aacttctttc
     1861 aacttccctg atttcaatac atctttagac agacttgtta atatttcatt tgttggtatg
     1921 tgatgatcac tacctgcacc tacatgcgat aagatttcat ttttgcttgt aattgctacg
     1981 gcagatactt tcattaaatt tttaataatc atcgcaattt gctgtgccga ttctctattc
     2041 aatccttctt taaaatacgg caatgtctgg ttcatcaatt gcagtacatc atgtgtttga
     2101 acagccttca tttgctcctc ttgctttaat gttgaaatga taatagacat aaaaatcgcc
     2161 gtaccaacgc tattaacaat aatcattggt agtgcaatta atgatatgag gtcaaccgca
     2221 tatgctttgt cgtgggaaaa tgttaaaatg ctcaacattt gaatcatttc cataacaatt
     2281 ccaatcatgg cacttttcgc aatactcggg taacgcttgc gtctttgagc ttgtaagcca
     2341 aaataaccag caattatacc gataaatata gatgagataa gataaacttg tgcatccgcc
     2401 ccacccatat acactctgaa aatacctgaa ataacgccaa caaatagacc tacaaaaggt
     2461 ccaccaacta atcctgcgac acctatcgtt aatacacgtg tgttagctaa agatacatca
     2521 tcatctaaac ggaagtacac acttcctgac aaactatgtt gatgatcgat gacgatacca
     2581 gttaaattag acattaaggc aaacaaactg aaaataatac ataattgcca acgtgctttc
     2641 catgtacgtc gacgattcat taagttttta aaatatggaa tattcatcaa cacataggcc
     2701 aaaataataa ttaaacctac acgctcaagt aataacattg ttagcgatag cacgatagca
     2761 cctcagtgaa ttataattat gtttatttta tcataatagt gtatgtaaaa ttcatgaata
     2821 aattattaaa aaaacacgct actatttaat tacctatacc attaaaattt catatcaatt
     2881 cttatgctaa gttgacaatt ttccttttca aaataatgac tatcatgtca ctaaatttct
     2941 gttaagtata gcgaaaaact gctgacatta atttgccaac agtttctaat cgcgctattt
     3001 atgatacttt tttaaataaa acatgattct ctaaatgaac atgctcatgt gttaacactt
     3061 caagtgcttt taatctctga taaacgagtc gccaagtacc acatgcctct atcggtggtt
     3121 catagcttga tgttaaatcg ctcattttca ctaacaattg tcccgttgca atgtgatcag
     3181 atactaaatc atcaatcact gtattaatat cgtctactac ttcaccttgt tcatatttaa
     3241 ttagttttgg aaaatcaaca tcatcttctt tttgcatatg ctctaacatg ccatttttaa
     3301 atgtatcata tgtttctttt aactcgacta aatatggatg attaggtcca tgtactttcg
     3361 ataatttcgt cacataaggt gttaaatttt taaattcttc tctaagaggt tcatgatatg
     3421 ctgcttgaat atattgaata agtgacgaaa tatttaaaaa tttagggtta agcgaacctg
     3481 gtgtattcgt ttgttcaacg tcgttgagac gctgtaataa ttcgttcaaa tctacatttt
     3541 tcttttctaa ggatgctgct tctatactta cttgtccacc acagcaaaag tctataccta
     3601 cgcttctaaa aatatctgct gctttcggat aatctgttac tacatctgct actatgtcat
     3661 ttttatttat cattatagac gacctcctca ttttcagtgt atacaattta atgtatttga
     3721 aaatgaaaat cagggaaatg tcataatcat gtcataaaca gcaaaataaa gccctcaaat
     3781 tatgttagtt cacatagatt tgagggcatt tgttatttat tttagcgagt aagtcatatg
     3841 tgcagtgttt aacttaacaa tatttttgaa gtctcgcttc ttaatatctt tactaagtaa
     3901 gatttccact tcgttttctg acgtttggct taacattccc ataatcatgt cgtcttttag
     3961 cacgacacta gccatacctt cttcaaatac atatccacga tccagaccag ttaaaatgat
     4021 tttgttttta ccttttaact tcattgagat tgaatccgtt aatgtaatag ctgtaaagta
     4081 taacgaaatg ttattaaagt cttttgtgaa atacggtgtt aatctataaa aatcattatt
     4141 caaatgaatt aatgcacttg tttctgcagt ataagcatat ttattacgtt gattaccaac
     4201 acgcacttca aatacttccg tacctatttg gacttctaag aaaacatccc aaattttttc
     4261 tttaggtaaa tacgctttaa tatcttctaa cataatgtta aaacgatatt gtttgttcgc
     4321 attgacactt aaaggtacat acattgtgtg cttcttgttt cgtgaatgta atttaagtct
     4381 gacatcataa tgtccttcgc caatcataaa ttcatttagc gttagctctg taacaatttt
     4441 atgattatca aatttaaatg ctgtcatttt cacttttggc ttagcgatat caatgccttc
     4501 aaagtatggt tcgccttcat tgaattgaat gtttaattta ccatctacaa tatcaaaacg
     4561 gtagtattga ccttgacggt aactttcttc tacagttcta tagttgtcta tgtctttcgc
     4621 tctcgcgtag tgtaacaatg gtcgtaattt actcatcacc aatgcatcta cacgttctgg
     4681 aactgcttgt ataaagtctc ctagagcatt aatccattgt ggttgctctt ctagtttaac
     4741 tttaagtgag aagccattcg tacgagaaaa actaaaatga cgatttaaaa attctgctaa
     4801 gatttgatct ttatgggctt cttctaaatc tgcatttaat atttctacag caatcaatct
     4861 catgacttcg taaaagtctt caggtgaaac atacgcacta ctcatatgtt ccccttcacg
     4921 ctttgtagca taataatacg ctttatcact taacacactg attcgatttg cattcaaata
     4981 tgctttcatt gtaaataatt gatcttctgc actctttaat tcttctggaa aataaatgtc
     5041 attatctttt agtaatgctg ttctatagat tttagtcggg cttaaagtat agataattct
     5101 tgaatttaac aaagtaactt caggtgctgt ttctttaaac atagattgtg gtacaccacg
     5161 accattaaca cctttcattt taatcaataa aacatctgag tgatgttcat caataaatgc
     5221 tgctgcatcc tttaaagtct ctttgtttat atagtcatcg gagtccacaa ataatacaaa
     5281 ttcaccttct gcttgtttta acgccacatt tctaggttta cctggaccac cagaatttgt
     5341 ttcgagttga cttactttca agttcaattt attacgatac ttttcaacta tttgtaacgt
     5401 ttgatctgtt gaacagtcat caactacaac cacttcaaat tcagttttcg gaaaatcttg
     5461 tttcgcaagg ctattaagta attctgttat atacttttct gaattgtatg ttggaactat
     5521 tactgaaaat ttcatcatta tacctctccc actttgacta ctatataaac ttagctacca
     5581 aataaatttc tgactaaacg ctcacttgat cgaccatctt gatatttaaa atgtttatct
     5641 aagaatggaa tgactttttc tccttcataa tcttcattgt ccaaggcgtc cattaatgag
     5701 tcaaatgatt gcacaatttt acctggaaca aatgattcat atggctcata aaaatcacgc
     5761 gtcgtaatat aatcttctaa atcaaatgca tagaaaatca ttggcttttt aaatactgca
     5821 tattcatata ttaaagatga atagtcacta attaataaat ctgttatgaa cagtatatca
     5881 ttaacttctc taaagtcaga aacgtcaaca aaatattgtt tatgtttgtc tgcaatatta
     5941 agtctatttt tcacaaatgg atgcatttta aataatacaa ccgcgttatt tttttcgcaa
     6001 tatcttgcta aacgttcgaa atcaattttg aaaaatgggt aatgtgctgt accatgacca
     6061 ctacctctaa atgttggtgc gaaaagaatg actttcttac ctttaataat tggtaattca
     6121 tcttccatct cttgtttgat ctgtgtcgca taagcttcat caaatagtac atcagtacgt
     6181 ggaacacctg taggcactac atttttctct ttaataccaa atgcttcagc gtagaatgga
     6241 atatcggttt cagatgatac ataagctttt gtatagctac gatgatttaa tgaatcaata
     6301 aatggtccac cctttttacc agtacgacta aagccaactg ttttaaaggc accaacggca
     6361 tgccatactt gaataacttc ttgagaacgt ctaaaacgca ctgtataaat caatgggtga
     6421 aagtcatcaa caaagatgta gtctgccttc ccaagtaaat atggcaatct aaacttgtcg
     6481 atgatgccac gtctatctgt aatattcgct ttaaaaacag tgtgaatatc atacttttta
     6541 tctaaatttt gacgtaacat ttcgttatag atgtattcaa agtttccaga catcgttggt
     6601 ctagagtctg atgtgaacaa caccgtattc ccttttttca agtggaaaaa tttcgtcgta
     6661 ttaaatatcg ctttaaaaat aaattgtctt gtattaaatg attgtttgcg gaaatactta
     6721 cgcaattctt tatatttacg aacgatataa ttacttttaa cttctggagt cgttacaaca
     6781 acatcaagga caaattcatt aacatcgcta gaaatttcag gtgtaacagt ataaaccgtt
     6841 ttctttgaaa tgccgccttt tctaaattct tttaggtaag tctgcaataa gaaattgatt
     6901 ttaccatttt gtgtttctaa ttcgttgtat tcttcttctt gttctggctt tagattttga
     6961 tatgcatcat taatcacatc tgggtttaac tgtgcaatat aatcaagttc ttgctcattc
     7021 actaataagt acttatcttc aggtaagtaa taaccattat ctaagatagc tacattgaaa
     7081 cgacaaacga attgattccc atctattttg acatcattcg ccttcattgt acgtgtctca
     7141 gttaaatttc ttaatacaaa attactatct tctaaatcta ggttttcact atgtccttca
     7201 acgaataact gaacacgttc ccaatagatt ttatctatat atatcttact tttaaccaac
     7261 gttaattcat ccttttctat ttacataatc cattttaata ctgttttacc ccaagatgta
     7321 gacaggtctg cttcaaaagc ttctgtaaga tcattaattg ttgcaatttc aaattcttga
     7381 ccttttaaca acgctaattt atctacaata tctgggtatt gaatgtataa gtctacaaca
     7441 tcttggaaat cttttgaacc acttcgacta ctaccaatca acgttagtcc tttttccaat
     7501 actagacgtg tattaacttc tactgggaac tcacttacac ctaacagtgc aatgcttcct
     7561 tctggtgaaa tataatcaat catttgattt attgctgatt ggctaccacg cccaccaacg
     7621 cactcaaatg catgatcaaa tgttaagcct tcaggtattt tattaataaa gaagacatca
     7681 tcaacaaatg agaagtgact caatttataa tctgttttac caaagacata tattttagac
     7741 tctggatata atttacgtaa taaaatggct gtaatgtaac ctaagttacc atcaccccaa
     7801 ataccaaatg tatttttatt tgaaatagat ttcttttcaa aacgacgaat agcatgcaaa
     7861 cttactgtta caagctctgt atatgaaata atacttaaat caatatcatc aggtagtggt
     7921 acagctctat catgatttag caacacaaaa tcttgcataa acccatcatg tccacttgat
     7981 ctgaagtagc tcgattttaa atagttttca gcaatgacat cgtctttttc tgtcggcgta
     8041 ttcggtacca taactacttt tgtaccttta ttaaacacac ctttactgtc aaatacgact
     8101 tcaccaacac cttcatgaat taaagacatt ggcaatttct gagataagac attctcatca
     8161 cggctaccag tataatatct ttgatcggca gcacaaattg acatatataa aggacgtaca
     8221 atgacataat cactgtaaat atctacgttg ttatacgtaa cttcaaattg tctaggtgca
     8281 actaattgat atacttgatt aatcatcggc aataccacct cgaataatag cattcgctac
     8341 ttttaaatcg taaggtgttg ttactttaat gttatataac tcacctttta caagtcgaac
     8401 cggtttgttt gtttctacaa taatcttaca agcatcagat aaaatactct tttgctcatc
     8461 actcaactgt gcatagcttt cttttaataa attaatatta aacgattgag gtgtttgacc
     8521 ttggtacatt tcattacgca ctggaattgc atcaatcgtt tgattatctt tagatgtaac
     8581 aatcgtatct atagcatcaa tcactgtatc tactgcaccg tactctaaag cagcttgaat
     8641 attttcttta ataatacgat gcgttaaaaa tggtctaact gcatcatgtg tcacaatgac
     8701 atcgtcatcg ttaataccat ttgttgattc aatatgttta acgatattca taattgtatc
     8761 gttacgatcg ctaccacctt gaatgacttc aattctttca tcagaaattt tgaattttct
     8821 aagtgtatct ttcgtatgcg tcatccattg ttgtggcgtc gcgataataa ttttttcaaa
     8881 atcattaatt aaaataaatt tttctaatgt atggattaaa atcggtttgt tgtctaaatc
     8941 taaaaattgt ttaggtaaag gtacgttacc cattcttgag cctatacctc cagctagaat
     9001 accagcgtat ttcataaaat acttcctcca ttcaactata tctatattta attatttaaa
     9061 tttcgttgca tttttcaatt gaaaactcat tttaaaatca aaactctaaa tgtctatgta
     9121 ttacttaaaa ttatacatat tttgcttata ttttagcata ttttgtttaa acctatatta
     9181 cattatatca gacgttttca tacacaaata ataacataca agcaaacatt tcgtttatta
     9241 tttatatcac ttaactaatt aatttataat tttttattgt ttttaagtta tcacttaaaa
     9301 atcgtttggc aaattcgttg tgacgcgtat ccatcttcta atgaacagaa tttctgataa
     9361 aataccgttc gtgcttcaat atactcattt gcagtctcat cgatttgttt taatgcatca
     9421 atgagtgctg tttgattttc aacaattgga cctggcaact cttttttata atccatgtaa
     9481 aaacctctaa gctcatcgcc atatttatct aagtcatacg catagaaaat ttgcggacgc
     9541 tttaatacac cgaagtcgaa catgacagat gagtagtcgg taactaacgc atcgctgatt
     9601 aagtataaat ccgaaatgtc ttcataatct gaaacgtctt tcacaaaatc atcatgttca
     9661 tcaatacgtg tcacaactaa ataatgcatg cgtaataaaa tgacataatc atcatccagc
     9721 gcttgacgca aagcttctat atcaaagtta acattaaatt gatatgaacc ttctcgaatc
     9781 gcttcatcgt cacgccaagt tggcgcatac ataatcactt ttttatctaa tggaatattt
     9841 aatcttgtct taataccgtt aatatattca gtatcattgc gtttatgtga taatttatca
     9901 tttcttggat aacctgtttc caaaatctta tctcgactaa catgaaatgc atgttgaaat
     9961 atcgatgtcg aatatggatt aggtgacact agataatccc aacgttggct ttctttttta
    10021 aagccatctt ggtaattttg agtatttgtt cctagcattt taacgttact aatatccaaa
    10081 ccaatctttt tcaatggcgt gccatgccat gtttgtaagt acgtcgttcg cggtgattta
    10141 tataaccaat ctggtgtacg tgtgttaatc atccacgctt tcgctcttgg catcgctaaa
    10201 aaccatttca ttgaaaactt tgtaacatat ggtacattgt gctgttggaa tatgtgttca
    10261 tatccttttt tcacacccca tattaattgg gcatcgctat gttcagttaa gtattcatat
    10321 aatgctttgg gattgtcgct gtattgttta ccatgaaagc tttcaaaata aattagattc
    10381 ttatttggca attttgatag taatttaaaa gtcgtatata tactgtgttc tatcaatttt
    10441 ttaattgtag ttttaatcat gtcgtacctc cgacgtgttt ttgtaattat attaatatgt
    10501 atgagcaagc tcattgtaat catgcctatt atagcatttc agcataaaat acatttaacc
    10561 attacacttg tcgttaatta tcatacgaaa tacatgatta atgtaccact ttaacataac
    10621 aaaaaatcgt tatccattca taacgtgtgt gtttacacat ttatgaatta gataacgatt
    10681 ggattgatta ttttatttta caaaatgaca attcagttgg aaggtgattg cttttgattg
    10741 aatcgccata tgcatgaaaa atcaaaaggt tattctcatt gtatagtcct gcttctcatc
    10801 atgacatgtt gctcacttca ttgtcagaac ccttcttgaa aactatgcct tatgactcat
    10861 ttgcatggca tgtaatatat gccaacatta gcgtctaaac aaatctttga ctaaacgttc
    10921 acttgagcga ccatcttgat atttaaaatg tttatctaag aatggcacaa ctttttcaac
    10981 ctcataatct tcattgtcca aagcatccat taatgcatca aaggactgta caattttacc
    11041 tggaacaaat gattcatatg gttcatagaa atcacgcgtc gtaatgtaat cttctaagtc
    11101 aaatgcatag aaaatcatcg gctttttaaa tactgcatat tcatatatta aagatgaata
    11161 atcactaatc aacaagtctg taacaaagag aatatcgtta acttcacgat gatctgacac
    11221 atcgataaag tattgtctat gttcacgtga aatattaagt ctatttttta cgaacggatg
    11281 cattttgaat aacacaactg cattatgctt ctcgcagtat cttgctaaac gttcaaaatc
    11341 aattttaaaa aatggataat gtgccgtacc gtgaccatta cctctaaatg tcggtgcgaa
    11401 tagaataact ttcttacctt ttataattgg caattcatct tccatctctt gtttaatttg
    11461 tgttgcataa gcttcatcaa atagtacatc agtacgtggt acacctgttg gtacaacatt
    11521 ttcttctcta attccaaatg cttcagcata aaatggaata tcggtttctg atgaaacata
    11581 tgctttcgtg taactacgat ggtttaatga atcgataaac ggaccacctt ttttacctgt
    11641 acgactaaag ccaactgttt taaaagcacc aacggcatgc cacacttgaa taatttcttg
    11701 tgatggtcta aagcgaaccg tataaattaa tggatgaaaa tcatcgacaa aaatataatc
    11761 agccttacca agtaaatatg gcaatctaaa cttgtctctc catttacgtc tatccgtaat
    11821 attcgcctta aatactgttt gaatatcgta atcaaaatct actttttggc gtagcaactc
    11881 atcatataca tacttgaaat tccctgataa attcggacgc gaatctgatg tgaataatat
    11941 tgttttgctt cttttaatat gtagtaactt tgtaatatta aaaatagctt taaataagaa
    12001 acttctactt tcaaatgaag ctttatgtcc ttgtttatga agccagtgtg cgcttgtcgc
    12061 aatgacccct gatttctctt gaggtaaggt gatttcaata tcaaatacaa attcgttaac
    12121 gtcacttgct atttctggag taatggtata aaccgtatgt tgtgatacgc cacctttgcg
    12181 gaaaacttta gcttcgttgg ctaacacata gtttgctttt ccattttgtg tagtcagctc
    12241 attgtattct tcaatttgct cttcatttaa tgccgcataa gcttgatcaa taatatttgg
    12301 attaagttgt ccaatatact ctaactggtc atgataaaca aataaatatt tatccattgg
    12361 taaataatac ccatcgtcta atattgcgac gttgaatcta catataaatg tattaccgtc
    12421 tattttcatt tcatttgctt ctaatgtttt tgtttcggtt aaattcctca gaacaaattg
    12481 tcctgatgtt aaatctacac cttcactatg tccttcaata tataactgaa cacgttccca
    12541 gtatatgtta tcaatatgta ttgcttgttt cgtttttgtc attgttattc ccccatcggt
    12601 ttattaaatc gtccatttca atactgtttt tccccaagat gtcgataaat ccatttcaaa
    12661 cgcttggacg atatcttgca tcgtacatac attaatttca tgtcctttta ataatgctaa
    12721 cttttcaaca atgtctgggt acttacgata taaatcaaca acttgctcaa aatctttaga
    12781 gccacttcga ctactaccaa tcaatgttaa tcctttttca agtactaatc gtgtattcac
    12841 ttccacgggt aattcactta cgcctaacaa agcaatactg ccttctggtg aaatatgttc
    12901 aactatttgt tgaagtgcaa cttgacttcc tttacctcca acacattcaa atgcatgatc
    12961 aattttaaga tcatctggta tttgatttac tgtaaagatg tcatctacaa atgaaaaatg
    13021 acttaattta tagtctgtct taccaaatac ataaatttta gcttctgggt acaacttacg
    13081 tagcaaaata gcagtaatat aacctaagtt accatcaccc caaataccaa aactggtttt
    13141 caaaggtata gatttacgtt caaatcgttg tatagcatga taacttactg acactaactc
    13201 tgtgtatgaa atcgtactca aatcaatgtc attaggcagc ggaacgatac gatcatgtgc
    13261 catcacaacg tagtcttgca taaaaccatc ataaccacta gatctaaaat aactagaggc
    13321 taagtaattc tccgcaataa tatgatgttg ctctgtaggt gtactcggca ccattactac
    13381 tttcgtacct ttttcaaata cgcctttact atcgaataca acttcaccaa cagcttcatg
    13441 aactagtgac attggtaatt ttttgcgcag tacattttca tctcttcgac ctgtgtaata
    13501 cctttgatca gctgcacaaa tagacaagta taaaggcctt acgatgacat gattaccata
    13561 aatatcaaca ttattatatg tgacgtcgaa ctgtctcggt gcaacgagtt gatatacttg
    13621 attaatcatc ggcaatatca ccttgaataa tggcatttgc tacttttaaa tcatatggtg
    13681 ttgtcacttt aatattgtat agttctccac gtaccaattt aactgcatgt ccagattcga
    13741 caatgatttt acatgcatct gataagattt ctttttgtgc actacttaag gcgcgataac
    13801 tatcttgtaa taatttaata ttaaatgatt gtggtgtttg gccttgatac atttcattcc
    13861 ttacggggat actgtgtatg ttctgtttat ctttagacat tacaatagta tcaattgctt
    13921 caatgactgt atctactgca ccatatttgg ctgctacttc aatgttctct ttaataatac
    13981 gttgagttaa aaatggtctt acggcatcat gagttacaat cacatcatca ttattaattc
    14041 catttacatt gcgaatatgg tcgataatgt tcataattgt ttcgtttcga tccgtaccac
    14101 ctgcaactac tttgacacgt tgatctgtaa tgttatattt ttttaaaata tcctgtgtat
    14161 gggaaatcca ctgtgctggc gttgcgataa taatctcatt aaattcactc actaaaatga
    14221 acttctcaat tgtatggatt aaaatcggtt tattatcaat atctaaaaat tgttttggta
    14281 atggcacgtt ccccattctc gaaccaatac ctcctgctaa aatacctgca taaatcatgt
    14341 tgtcctccat tctgtcatta catcatttcc atttatacat tactgaccta tgcccgaaca
    14401 taagcctaac ctattgctca cttgcctctt ttattaagtc aaaggtagtt gtcacaatag
    14461 tgtgataatt ttttataaaa atgtattttt gtaactgacc tttctaagtt gttttgccat
    14521 gcagttaatc attaacactg acgatattaa attgttaaag gtattaatgt ttactctttt
    14581 tcaaattcat t
//
LOCUS       DALMNS010000076        14584 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.076, whole genome shotgun sequence.
ACCESSION   DALMNS010000076 DALMNS010000000
VERSION     DALMNS010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 14584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14584
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.076"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            68..361
                     /gene="esxA"
                     /locus_tag="O6Y56_001891"
     CDS             68..361
                     /gene="esxA"
                     /locus_tag="O6Y56_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WXG100 family type VII secretion effector EsxA"
                     /protein_id="HDB5575141.1"
                     /translation="MAMIKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWE
                     GQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQLSNNFGLQ"
     gene            444..3473
                     /gene="esaA"
                     /locus_tag="O6Y56_001892"
     CDS             444..3473
                     /gene="esaA"
                     /locus_tag="O6Y56_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EsaA"
                     /protein_id="HDB5575142.1"
                     /translation="MKKKNWIYALIVTLIIIIAIVSMIFFVQTKYGDQSEKGSQSVSN
                     KNNKIHIAIVNEDQPTTYNGKKVELGQAFIKRLANEKNYKFETVTRNVAESGLKNGGY
                     QVMIVIPENFSKLAMQLDAKTPSKISLQYKTAVGQKEEVAKNTEKVVSNVLNDFNKNL
                     VEIYLTSIIDNLHNAQKNVGAIMTREHGVNSKFSNYLLNPINDFPELFTDTLVNSISA
                     NKDITKWFQTYNKSLLSANSDTFRVNTDYNVSTLIEKQNSLFDEHNTAMDKMLQDYKS
                     QKDSVELDNYINALKQMDSQIDQQSSMQDTGKEEYKQTVKENLDKLREIIQSQESPFS
                     KGMIEDYRKQLTESLQDELANNKDLQDALNSIKMNNAQFAENLEKQLHDDIVKEPDTD
                     TTFIYNMSKQDFIAAGLNEDEANKYEAIVKEAKRYKNEYNLKKPLAEHINLTDYDNQV
                     AQDTSSLINDGVKVQRTETIKSNDINQLTVATDPHFNFEGDIKINGKKYDIKDQSVQL
                     DTSNKEYKVEVNGVAKLKKDAEKDFLKDKTMHLQLLFGQANRQDEPNDKKATSVVDVT
                     LNHNLDGRLSKDALSQQLSALSRFDAHYKIYTDTKGREGKPFDNKRLIDMMVDQVIND
                     MESFKDDKVAVLHQIDSMEENSDKLIDDILNNKKNTTKNKEDISKLIDQLENVKKTFA
                     EEPQEPKIDKGKNDEFNTMSSNLDKEISRISEKSTQLLSDTQESKSIADSVSGQLNQV
                     DNNVNKLHATGRALGVRANDLNRQMAKNDKENDLFAKEFKKVLQNSKDGDRQNQALKA
                     FMSNPVQKKNLENVLANNGNTDVISPTLFVLLMYLLSMITAYIFYSYERAKGQMNFIK
                     DDYSSKNHLWNNIITSGVIGTTGLVEGLIVGLIAMNKFHVLAGYRAKFILMVILTMMV
                     FVLINTYLLRQVKSIGMFLMIAALGLYFVAMNNLKAAGQGVTNKISPLSYIDNMFFNY
                     LNAEHPIGLALVILTVLVIIGFVLNMFIKHFKKERLI"
     gene            3473..3931
                     /gene="essA"
                     /locus_tag="O6Y56_001893"
     CDS             3473..3931
                     /gene="essA"
                     /locus_tag="O6Y56_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssA"
                     /protein_id="HDB5575143.1"
                     /translation="MLMNSVIALTFLTASSNNGGLNIDVQQEEEKRINNDLNQYDTTL
                     FNKDSKAVNDAIAKQKKERQQQIKNDMFQNQASHSTRLNETKKVLFSKSNLEKTSESD
                     KSPYIQNKQEKKIFPYILMSVGAFLTLGFVIFSIHKGRRTKNESARKSNI"
     gene            3903..4145
                     /gene="esaB"
                     /locus_tag="O6Y56_001894"
     CDS             3903..4145
                     /gene="esaB"
                     /locus_tag="O6Y56_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001071606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EsaB"
                     /protein_id="HDB5575144.1"
                     /translation="MNQHVKVTFDFTNYNYGTYDLAVPAYLPIKNLIALVLDSLDISI
                     FDVNTQIKVMTKGQLLVENDRLIDYQIADGDILKLL"
     gene            4158..5492
                     /gene="essB"
                     /locus_tag="O6Y56_001895"
     CDS             4158..5492
                     /gene="essB"
                     /locus_tag="O6Y56_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssB"
                     /protein_id="HDB5575145.1"
                     /translation="MVKNHNPKNEMQDMLTPLDAEEAAKTKLRLDMREIPKSSIKPEH
                     FHLMYLLEQHSPYFIDAELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIK
                     NLEEVNRTRYTFVLAPDELFFTRDGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALVIC
                     AFNEKQSFDALVEGNLELHKGTPFETKVIEAATLDLLTAFLDEQYQKQEQDYSQNYAY
                     VRKVGHTVFKWVAIGMTTLSVLLIAFLAFLYFSVMKHNERIEKGYQAFVKDDYTQVLN
                     TYDDLDGKKLDKEALYIYAKSYIQTNKQGLEKDKKENLLNNVTPNSNKDYLLYWMELG
                     QGHLDEAINIATYLDDNDITKLALINKLNEIKNNGDLSNDKRSEETKKYNDKLQDILD
                     KEKQVKDEKAKSEEEKAKAKDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK"
     gene            5514..9962
                     /gene="essC"
                     /locus_tag="O6Y56_001896"
     CDS             5514..9962
                     /gene="essC"
                     /locus_tag="O6Y56_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000549304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssC"
                     /protein_id="HDB5575146.1"
                     /translation="MHKLIIKYNKQLKMLNLRDGKTYTISEDERADITLKSLGEVIHL
                     EQNNQGTWQANHTSINKVLVRKGDLDDITLQLYTEADYASFAYPSIQDTMTIGPNAYD
                     DMVIQSLMNAIIIKDFQSIQESQYVRIVHDKNTDVYINYELQEQLTNKAYIGDHIYVE
                     GIWLEVQADGLNVLSQNTVASSLIRLTQEMPHAQADDYNTYHRSPRIIHREPTDDIKI
                     ERPPQPIQKNNTVIWRSIIPPLVMIALTVVIFLVRPIGIYILMMIGMSTVTIVFGITT
                     YFSEKKKYNKDVEKREKDYKAYLDNKSKEINKAIKAQRFSLNYHYPTVAEIKDIVETK
                     APRIYEKTSHHHDFLHYKLGIANVEKSFKLDYQEEEFNQRRDELFDDAKELYEFYTDV
                     EQAPLINDLNHGPIAYIGARHLILEELEKMLIQLSTFHSYHDLEFLFVTREDEVETLK
                     WARWLPHMTLRGQNIRGFVYNQRTRDQILTSIYSMIKERIQAVRERSRSNEQIIFTPQ
                     LVFVITDMSLIIDHVILEYVNQDLSEYGISLIFVEDVIESLPEHVDTIIDIKSRTEGE
                     LITKEKELVQLKFTPENIDNVDKEYIARRLANLIHVEHLKNAIPDSITFLEMYNVKEV
                     EQLDVVNRWRQNETYKTMAVPLGVRGKDDILSLNLHEKAHGPHGLVAGTTGSGKSEII
                     QSYILSLAINFHPHEVAFLLIDYKGGGMANLFKDLVHLVGTITNLDGDEAMRALTSIK
                     AELRKRQRLFGEHDVNHINQYHKLFKEGIATEPMPHLFIISDEFAELKSEQPDFMKEL
                     VSTARIGRSLGIHLILATQKPSGVVDDQIWSNSKFKLALKVQDRQDSNEILKTPDAAD
                     ITLPGRAYLQVGNNEIYELFQSAWSGATYDIEGDKLEVEDKTIYMINDYGQLQAINKD
                     LSGLEDEETKENQTELEAVIDHIESITTRLEIEEVKRPWLPPLPENVYQEDLVETDFR
                     KLWSDDAKEVELTLGLKDVPEEQYQGPMVLQLKKAGHIALIGSPGYGRTTFLHNIIFD
                     VARHHRPDQAHMYLFDFGTNGLMPVTDIPHVADYFTVDQEDKIAKAIRKIHDIISERK
                     RLLSQERVVNIEQYNKETGNSIPNVFLIIDNYDTVKESPFMEEYEEMMSKVTREGLAL
                     GVYIILSGSRSSAIKSAIFTNIKTRVALYLFENNELTNIIGSYKKGVKDVKGRAAIND
                     DNFTQFQIAQPFELAEGQTYNEHIKNEVAQMKEFYVGDYPKHIPMMPDKVFMEDIREA
                     YDLEKIIHEEHKLPLGLDFEDVELVSLDLTSSSIVTAIKPTEMEKMNDVIMSSLSVYS
                     KNQFVILVDAEDNMSQYAEDVTSYYSAPSDLSNIRLGFKQEIEARKNGEKSIEECKIV
                     FINNIKRFNQLTGMTEDEIRVLFNEGQKVNIIIIASGLYSDTIGAFDRESKMMVRTIN
                     QALISHKISEQEFIRVKDRFGEPELKVGEMYYINNQEYQKIKLMEG"
     gene            9965..10231
                     /locus_tag="O6Y56_001897"
     CDS             9965..10231
                     /locus_tag="O6Y56_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000593834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwqI/YxiC family protein"
                     /protein_id="HDB5575147.1"
                     /translation="MIKLNQASVSKEISSIRTNGQGLKQSNGNVNLSKTNLVTFKEYV
                     NMFEDYQSALSNYENIIEQDTTAMDTTVTEIVENDREIAGQINK"
     gene            10254..10649
                     /locus_tag="O6Y56_001898"
     CDS             10254..10649
                     /locus_tag="O6Y56_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000066177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5082 family protein"
                     /protein_id="HDB5575148.1"
                     /translation="MCNKGEIRRQIANKEREKASKEAQLTDLKEDLRRLKDASKKLDT
                     AGEDFNKGQSSYNKVEISTSDWKGERRTKSDSKKKDVDSELKKVEQDFDDAKKAIKKD
                     IQDKEEEIKGVEGEISTINAAIDALKSKL"
     gene            10671..12341
                     /locus_tag="O6Y56_001899"
     CDS             10671..12341
                     /locus_tag="O6Y56_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000540847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDB5575149.1"
                     /translation="MGYKVDMSEVHNMQKSIDSSLSAINTKVSTLSSSINNLINTEGF
                     EGQTASSVKNYSKTFHLQSIKKIETINKDFKSDIAKSIRKFQSEVDNNASAILDEDEI
                     KKYKKDIDDALKDVFKSSKDANGAISDVSDLTTAKKIKTENLANKMGDFNKDIDQTVE
                     RLTTFDANNSIDGDKTDNLITELSGVNSYVKNMKPNRARISSTSGKIEGAIARHKTSE
                     ELVRWQTYMETLSENLYKTPGLSKAASDIITQAGREYYAIKAVGNGSALRGYKEYLKT
                     RDINKLINKMNKNQLKRMSLVLNTDRGNIKIKNAVKMASEFARNNPFKKGNLVNWMSK
                     VQGYQSVSAQILKKGLQDKNFKYTFGDAKKFFDTADMKKAAVTEFKNTFVPQNIRETF
                     FKKENLTSKTALKKNMSKFWNEDIKGGIKEFKLDFANKNIIGKLGKLLKLGGKALKPL
                     GFITAITDNIGKKSWQEKLVGMGVDLSAIGASAAAGAAVGTAIPLPVVGTVAGALAGA
                     AVGIALDYKIPYLDKSATELAKDGINSGINKVKSGFGKVTSGFKTVFG"
     gene            12357..13001
                     /locus_tag="O6Y56_001900"
     CDS             12357..13001
                     /locus_tag="O6Y56_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000701500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5079 family protein"
                     /protein_id="HDB5575150.1"
                     /translation="MKIQEIVGNIKRAYLTPLIIFVILFSLFFDLIMYFYGNLQGKLP
                     IYLDVFLIFAAVVFILMYFQEKSGEVKVEKSNVIRYLTLNVVAGYSMVLLVASIYVFG
                     VAGYGFDVFNYWLGIILMLFVSWFALFLFYKNEFDSENPNKAVNVIAIIIKLSAFGGL
                     FYIRTVVPNTADEEKFITLSILINIAVDLLLVRSYFNYALYKSVKKDIENGVDD"
     gene            13001..13456
                     /locus_tag="O6Y56_001901"
     CDS             13001..13456
                     /locus_tag="O6Y56_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000451777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5085 family protein"
                     /protein_id="HDB5575151.1"
                     /translation="MEVGMLIMPFCVKITFEIDKNDNWLNALDTVNEFFMDKDIYPTG
                     PIIFQRELAGLGEYKYTAYIALNDELQDIPELNIKYIDCLEVGPTLSTKCFEEEEFER
                     AYKEIEYVANENNIKILNQPYYHVMVDYFGGTAFEIYAQVDLDESEVYG"
     gene            13449..13907
                     /locus_tag="O6Y56_001902"
     CDS             13449..13907
                     /locus_tag="O6Y56_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000360006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5085 family protein"
                     /protein_id="HDB5575152.1"
                     /translation="MDKNGYSYIMMKNVAYKTYFDVTMDDYEDILKDFTNLAISKGKT
                     ITGPLTFAVTQIDLQKRMNIDLFISVGKCFKSNEELSYRTYFCLDNMLHGRITSNNFI
                     TDEIALLEDMNEFASDNNLTFTSPYYHTMRKSFSGEQGWIDVKAKVYEND"
     gene            13931..14518
                     /locus_tag="O6Y56_001903"
     CDS             13931..14518
                     /locus_tag="O6Y56_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5080 family protein"
                     /protein_id="HDB5575153.1"
                     /translation="MIIFILLTVFSLFYIAMIASLFKSEGFSIIGLILDIVILTTLIF
                     YYFVGASFVDNDLSNFLAFMNFGSFVYMYYAIKSLWVKPKLVNYIIAKEIGESKDVIE
                     EQELDLQTSKIRGIYFFIIAIAMLIITKLRMQPELQADAISMNPVFIFIGVIIILIWL
                     VLDIYRKKKYGIFLFKTIVPLVVTTWIIIATIVLS"
BASE COUNT         5754 a         1902 c         2671 g         4257 t
ORIGIN      
        1 actttttcaa aaaatagtgt ccctaaaaag ttttgataaa cttaaaatat tcaggaggtt
       61 tctagttatg gcaatgatta agatgagtcc agaggaaatc agagcaaaat cgcaatctta
      121 cgggcaaggt tcagaccaaa tccgtcaaat tttatctgat ttaacacgtg cacaaggtga
      181 aattgcagcg aactgggaag gtcaagcttt cagccgtttc gaagagcaat tccaacaact
      241 tagtcctaaa gtagaaaaat ttgcacaatt attagaagaa attaaacaac aattgaatag
      301 cactgctgat gccgttcaag agcaagacca acaactttct aataatttcg gtttgcaata
      361 agcattctga aattggcaaa gtcacatttt ctaatgtggc tttgcttatc attttttaag
      421 aaaacaactg aaaggaaata agcatgaaaa agaaaaattg gatttatgca ttaattgtca
      481 ctttaattat tataattgcc atagttagta tgatattttt tgttcaaaca aaatatggag
      541 atcaatcaga aaaaggatcc caaagtgtaa gtaataaaaa taataaaata catatcgcaa
      601 ttgttaacga ggatcaacca acgacatata atggtaaaaa ggttgagctg ggtcaagcat
      661 ttattaaaag gttagcaaat gagaaaaact ataaatttga aacagtaaca agaaacgttg
      721 ctgagtctgg tttgaaaaat ggcggatacc aagtcatgat tgttatccca gaaaactttt
      781 caaaattggc aatgcaatta gacgctaaaa caccatcgaa aatatcacta cagtataaaa
      841 cagctgtagg acaaaaagaa gaagtagcta aaaatacaga aaaagttgta agtaatgtac
      901 ttaacgactt taacaaaaac ttagtcgaaa tttatttaac aagcatcatt gataatttac
      961 ataatgcaca aaaaaatgtt ggcgctatta tgacgcgtga acatggtgtg aatagtaaat
     1021 tctcgaatta cttattaaat ccaattaacg acttcccgga attatttaca gatacgcttg
     1081 taaattcaat ttctgcaaac aaagatatta caaaatggtt ccaaacatac aataaatcat
     1141 tattgagtgc gaattcagat acgttcagag tgaacacaga ttataatgtt tcgactttaa
     1201 ttgaaaaaca aaattcatta tttgacgagc acaatacagc gatggataaa atgttacaag
     1261 attataaatc gcaaaaagat agcgtggaac ttgataacta tatcaatgca ttaaaacaga
     1321 tggacagcca aattgatcaa caatcaagta tgcaagatac aggtaaagaa gaatataaac
     1381 aaactgttaa agaaaactta gataaattaa gagaaatcat tcaatcacaa gagtcaccat
     1441 tttcaaaagg tatgattgaa gactaccgta agcaattaac agaatcacta caagatgaac
     1501 ttgcaaataa caaagactta caagatgcgc taaatagcat taaaatgaac aatgctcaat
     1561 tcgctgaaaa cttagagaaa caacttcatg atgatattgt caaagaacct gatacagata
     1621 caacatttat ctataacatg tctaaacaag actttatagc tgcaggttta aatgaggatg
     1681 aagctaataa atacgaagca attgtcaaag aagcaaaacg ttataaaaac gaatataatt
     1741 tgaaaaaacc gttagcagaa cacattaatt taacagatta cgataaccaa gttgcgcaag
     1801 acacaagtag tttgattaat gatggtgtga aagtgcaacg tactgaaacg attaaaagta
     1861 atgatattaa tcaattaact gttgcaacag atcctcattt taattttgaa ggcgacatta
     1921 aaattaatgg taaaaaatat gacattaagg atcaaagtgt tcaactcgat acatctaaca
     1981 aggaatataa agttgaagtc aatggcgttg ctaaattgaa aaaggatgct gagaaagatt
     2041 tcttaaaaga taaaacaatg catttacaat tgttatttgg acaagcaaat cgtcaagatg
     2101 aaccaaatga taagaaagca acgagtgttg tggatgtaac attgaatcat aaccttgatg
     2161 gtcgcttatc gaaagatgca ttaagccagc aattaagtgc attatctagg tttgatgcgc
     2221 attataaaat atacacagat acaaaaggca gagaaggtaa accattcgac aacaaacgtt
     2281 taattgatat gatggttgac caagttatca atgacatgga aagtttcaaa gacgataaag
     2341 tagctgtgtt acatcaaatt gattcaatgg aagaaaactc agacaaactg attgatgaca
     2401 ttttaaataa caaaaagaat acaacaaaaa ataaagaaga tatttctaag ctgattgatc
     2461 agttagaaaa cgttaaaaag acatttgctg aagagccaca agaaccaaaa attgataaag
     2521 gcaaaaatga tgaattcaac acaatgtctt caaatttaga taaagaaatt agtagaattt
     2581 ctgagaaaag tacacaattg ctatcagata cacaagaatc aaaatcaatt gcagattctg
     2641 ttagtggcca attaaatcaa gtcgacaata atgttaataa gctacatgcg acaggtcgtg
     2701 cattaggtgt aagagctaac gacttgaatc gtcaaatggc taaaaacgat aaagaaaatg
     2761 atttattcgc taaagagttt aaaaaagtat tacaaaattc taaagatggc gacagacaaa
     2821 accaagcatt aaaagcattt atgagtaatc cggttcaaaa gaaaaactta gaaaatgttt
     2881 tagctaataa tggtaataca gacgtgattt caccgacatt attcgtatta ttgatgtatt
     2941 tactttcaat gattacagca tatattttct atagttatga acgtgccaaa ggacaaatga
     3001 atttcattaa agatgattat agtagtaaaa atcatctttg gaataatatc attacgtcag
     3061 gtgttattgg tacaactggt ttggtagaag gattaattgt cggtttaatt gcaatgaata
     3121 agttccatgt attagctggc tatagagcga aattcatctt aatggtgatt ttaactatga
     3181 tggtcttcgt acttattaat acgtatttac taagacaggt aaaatctatc ggtatgttct
     3241 taatgattgc tgcattgggt ctatactttg tagctatgaa taatttgaaa gcagctggac
     3301 aaggtgtgac taataaaatt tcaccattgt cttatatcga taacatgttc ttcaattatt
     3361 taaatgcaga gcatcctata ggcttggcgc tagtaatatt aacagtactt gtgattattg
     3421 gctttgtact gaacatgttt ataaaacact ttaagaaaga gagattaatc taatgttgat
     3481 gaatagcgtg attgctttaa cttttttaac agcatctagc aataatggcg gacttaatat
     3541 tgatgtgcaa caagaagagg aaaagcgaat caataatgat ttaaatcaat atgatacaac
     3601 gctatttaat aaagacagca aagcggttaa tgatgcgatt gctaagcaga aaaaagaacg
     3661 acaacaacaa ataaaaaatg atatgtttca aaatcaagcg agtcactcga ctcgcttgaa
     3721 tgaaactaaa aaagtgttat tttccaaatc taacttagaa aagacttcgg agagtgataa
     3781 aagcccctat attcaaaaca agcaggagaa aaaaatattc ccgtacattt tgatgtctgt
     3841 aggggctttt ttgactttag gatttgtcat tttttcaatt cataaaggga gacgaacgaa
     3901 aaatgaatca gcacgtaaaa gtaacatttg attttactaa ttataattac ggcacatatg
     3961 acttagcagt accagcatat ttaccgataa aaaacttaat agctttagta ttggatagtt
     4021 tggacatttc aatatttgat gtcaatacac aaattaaagt gatgacgaaa ggtcaattac
     4081 ttgttgaaaa tgatcgactc attgattatc aaatcgctga tggagatatt ttgaagttac
     4141 tataggagga aaaatagatg gttaaaaatc ataaccctaa aaatgaaatg caagatatgt
     4201 taacgccttt agatgctgaa gaagcagcta aaacaaaatt acgcttagat atgagagaga
     4261 ttcctaagtc ttcaattaaa ccagaacatt ttcatttaat gtacttatta gaacaacatt
     4321 ctccatattt tatagatgct gaattaactg aactacgtga cagtttccaa atacattatg
     4381 acattaatga caatcataca ccttttgata atattaaatc atttactaaa aatgaaaaat
     4441 tacgttactt actcaatatc aaaaatttag aagaagtaaa tcgtacacgc tacacatttg
     4501 tgttggcacc agatgaatta tttttcacaa gagatggatt accaattgct aaaacaagag
     4561 gtttacaaaa tgttgttgat ccattaccgg tgtcagaagc tgaattttta acaagatata
     4621 aagcactggt tatctgtgca ttcaatgaga aacaatcatt tgatgcttta gttgaaggaa
     4681 acttagaact acataaagga acgccatttg aaactaaagt tattgaagcg gcaactttag
     4741 atttactaac ggcattttta gatgaacagt atcagaaaca agaacaagat tatagtcaaa
     4801 attatgcata tgtacgtaaa gtaggacata ccgtttttaa atgggttgct atcggtatga
     4861 caacgttaag tgttttatta attgcattct tagccttttt atatttttca gtaatgaagc
     4921 ataatgagcg cattgaaaaa ggataccaag catttgtaaa ggatgattat acgcaagtac
     4981 taaatacgta tgatgattta gatggtaaaa aattagataa agaggcactt tacatttatg
     5041 ccaaaagtta tatccaaaca aataaacaag gtttagaaaa agataagaaa gaaaatttac
     5101 ttaataacgt gacaccaaat tcaaataaag actacttatt atattggatg gaattaggac
     5161 aaggacatct tgatgaagcg attaatatag ccacttattt agatgataac gatattacaa
     5221 agttagcgtt gattaataaa ttaaatgaga ttaaaaataa cggagattta tcgaatgata
     5281 aacgttctga agaaacgaaa aagtataacg ataaattgca agatatttta gacaaagaaa
     5341 aacaagttaa agatgaaaaa gcgaaatctg aagaagagaa agcaaaagcg aaagatgaga
     5401 aattaaagca acaagaagag aacgaaaaga aacaaaaaga acaagcacaa aaagataaag
     5461 aaaaacgcca agaagctgaa agaaaaaaat agtataggac tgaggcaaag acaatgcata
     5521 aattgattat aaaatataac aaacaattga agatgctcaa tttgcgagat ggtaagacat
     5581 atactattag cgaagacgag cgtgcagata ttacgttgaa atcgttaggc gaagtcattc
     5641 atttagaaca aaataatcaa ggtacttggc aagcgaatca tacttctatt aataaggtgc
     5701 ttgttagaaa aggtgacctt gatgacatta cattacagct ttatacagaa gctgattatg
     5761 catcatttgc gtatccttca attcaagata cgatgacaat tggaccaaat gcgtatgatg
     5821 atatggttat tcaaagcttg atgaatgcca tcattattaa agattttcaa tcaatacaag
     5881 aatcacaata cgtacgcatt gtgcacgata aaaatacaga tgtgtatatt aactatgaac
     5941 tacaagagca actaacgaac aaagcttaca ttggtgatca tatttatgtt gaagggatat
     6001 ggctcgaagt acaagctgat ggtttaaatg tattgagtca gaatacagtg gcatcgtcat
     6061 taattcgctt aacacaagag atgccacatg cacaggcaga tgattacaat acgtaccatc
     6121 gttcgccaag gattattcac cgtgaaccga ccgatgatat taagattgaa agaccaccac
     6181 agccaataca gaagaacaat acagtgatat ggcgttccat tataccgcca ttagtaatga
     6241 ttgctttaac tgttgtcatc tttttagtga gaccaattgg tatttatatt ttaatgatga
     6301 ttggtatgag tacagtaacg atagtatttg gtattacaac gtatttctct gaaaagaaaa
     6361 agtataacaa agatgttgaa aaacgagaga aagattacaa agcttatttg gataataaat
     6421 ctaaagaaat taataaagcg attaaagcac aacgttttag tttgaattac cattatccaa
     6481 cggttgctga aattaaagat atcgttgaaa cgaaagcacc aagaatatat gaaaaaacat
     6541 cgcatcatca cgatttctta cattataagt taggtattgc gaatgtagaa aagtcattca
     6601 aattagatta ccaagaagaa gaatttaatc aacgtcgtga tgaactattc gacgatgcta
     6661 aagaattgta tgaattttac acagatgtag aacaagcacc attaatcaat gatttaaatc
     6721 atgggccaat tgcatatatt ggtgcacgac atctcatttt agaagaattg gagaaaatgc
     6781 taatccaatt gtcaacattc catagttatc atgatttaga gtttctattt gtgacacgtg
     6841 aagatgaagt tgaaacattg aaatgggcac gttggttgcc acatatgaca ttgagaggtc
     6901 aaaacattag agggtttgtt tacaatcaac gaacacgtga ccaaatttta acgtcaattt
     6961 atagcatgat taaagaacgt atccaagctg tgcgtgaacg cagcagaagt aatgagcaaa
     7021 ttatttttac accgcaatta gtgtttgtca ttacagatat gtcattaatt attgatcatg
     7081 tcattttaga atatgtaaac caagatttat cagaatatgg tatttcatta atctttgttg
     7141 aagatgtgat tgaaagtttg ccagagcatg tagataccat tattgatatc aagtctcgta
     7201 ctgaaggcga actgattacg aaagaaaaag aattagttca attgaaattt acacctgaaa
     7261 atattgataa cgtcgataaa gaatatatcg cgcgacgttt ggcgaatttg atacacgtcg
     7321 aacatttgaa aaatgcaatt cctgatagta ttacattttt agagatgtat aacgtgaaag
     7381 aagtagaaca gcttgatgtg gttaatcgat ggagacaaaa cgaaacatac aaaacgatgg
     7441 cagtaccttt aggtgtaaga ggtaaagatg atattttatc attgaactta catgaaaaag
     7501 cacatgggcc acatggttta gttgctggta ccactggttc agggaaatct gagattatcc
     7561 aatcatacat tttatcttta gctattaatt ttcaccctca tgaagttgca ttcctattga
     7621 ttgactataa aggtgggggt atggcgaact tatttaaaga tttagtccat ctagttggta
     7681 cgattacaaa cttagatggc gatgaagcga tgcgtgcctt aacatcaatc aaagccgaat
     7741 tgagaaaacg tcaacgttta ttcggagagc atgatgttaa ccatattaat caataccata
     7801 agttatttaa agaaggtatt gcgacagaac caatgccaca tttattcatt atttccgatg
     7861 agtttgccga attaaaatca gaacaacctg attttatgaa agaacttgta tcaacggcac
     7921 gtattggacg ttcgttaggt attcatttaa tacttgcgac acaaaaacca tcgggtgttg
     7981 ttgatgacca aatttggtct aactctaaat ttaaattggc attaaaagta caagatagac
     8041 aagacagtaa tgaaatttta aaaacaccag atgcagcaga cattacatta ccaggtcgtg
     8101 cgtatttaca agttggtaat aatgaaattt atgaattatt ccaatctgca tggagtggtg
     8161 caacatatga catcgaaggc gataaattag aagttgaaga taagacgatt tacatgatta
     8221 atgactatgg tcaacttcaa gcgattaaca aagacttgag tggacttgaa gatgaagaaa
     8281 cgaaagaaaa tcaaactgag ttagaagcgg ttatcgatca tatagaatct attacaacga
     8341 gattagaaat tgaagaagtt aagcgtccat ggttaccacc attgccagaa aatgtatatc
     8401 aagaagattt agtagaaaca gattttagaa aattatggtc agatgatgca aaagaagtgg
     8461 aattaacatt aggacttaaa gacgtaccag aagaacaata tcaagggccg atggtattac
     8521 aattgaaaaa agctggtcac atcgcgttaa tcggaagtcc aggatatggt agaacaacgt
     8581 tcttacacaa cattattttc gatgttgcaa gacaccatcg tcctgatcaa gcacacatgt
     8641 acttgttcga tttcggtacc aatggtttga tgccagtcac agacataccg catgttgctg
     8701 attactttac agtagatcaa gaagacaaga ttgcgaaggc gatacggaag atacatgata
     8761 ttatttctga gcgaaaaaga ctattaagtc aagagagagt agttaatata gagcaatata
     8821 ataaagaaac tggaaattca attccaaatg ttttcttaat tatcgataac tacgacacgg
     8881 tgaaagaatc accatttatg gaagaatatg aagaaatgat gtctaaggta acacgtgaag
     8941 gtttagcgtt aggggtatac atcattcttt caggatcaag atcaagtgca ataaaatcag
     9001 ctatatttac taacattaaa acaagagttg cgctgtacct ctttgaaaac aatgaattaa
     9061 caaatattat tggttcttat aaaaaaggtg tgaaagatgt taaaggtaga gctgcaataa
     9121 atgatgataa cttcacacag ttccaaattg cgcaaccatt tgaattagca gaaggacaaa
     9181 catataacga gcacattaaa aatgaagtag cacaaatgaa agaattctat gtaggagatt
     9241 atccaaagca tattccaatg atgccagata aggtatttat ggaggatatt cgagaagcat
     9301 atgatttgga aaaaatcatt catgaagaac acaaattacc attaggatta gactttgagg
     9361 atgtggaact agttagttta gatctgacaa gttcttcgat tgtaacagca attaaaccaa
     9421 ctgagatgga aaaaatgaat gatgttataa tgtctagttt atcagtatat agtaaaaacc
     9481 aatttgttat cttggttgat gcagaagata atatgagcca gtatgcagaa gatgtaacct
     9541 cttattattc agcaccatca gatttgagca acattagatt aggatttaag caagaaatag
     9601 aagcaaggaa aaatggcgag aaaagtatag aggaatgcaa gattgtattt ataaataata
     9661 ttaaacgatt caatcaatta actggaatga cagaagatga aattcgtgtg ttatttaatg
     9721 aaggtcaaaa agttaatatt atcattattg caagtggact atactcagat acaattggtg
     9781 catttgatag agaaagtaaa atgatggtaa gaactataaa tcaagctttg attagtcata
     9841 agatatcgga acaagaattt ataagagtta aagatcgatt tggtgaacca gaattaaaag
     9901 tgggagaaat gtattacatt aataatcaag aatatcaaaa aataaaacta atggagggat
     9961 agagttgata aagttaaacc aagcctctgt gagcaaagaa atttcaagca ttcgaacaaa
    10021 tggacaaggc ttaaaacaat caaatgggaa tgtaaattta agtaaaacga atctcgttac
    10081 ttttaaagaa tatgtaaata tgtttgaaga ttatcaatca gctctatcta attatgaaaa
    10141 cataattgaa caagatacga cggctatgga tacaacggta acagaaattg ttgaaaacga
    10201 tagagaaata gcaggacaaa ttaataaata attaaacaag acgggtgaga aaaatgtgta
    10261 ataagggaga aataagaagg caaattgcta ataaagaaag agaaaaagca agtaaagaag
    10321 cacaactaac agatttaaaa gaggatttaa gaagattgaa agatgcttcg aaaaaattgg
    10381 atacagcagg agaagatttt aacaaaggac agagtagtta taacaaagta gaaattagta
    10441 cttcagattg gaaaggagaa agaaggacta aaagtgacag caaaaagaaa gatgtcgatt
    10501 ctgaattaaa aaaagttgaa caagactttg atgatgcgaa gaaggctatt aaaaaagata
    10561 ttcaggataa agaagaagaa atcaagggag tcgaaggaga aatcagtaca ataaatgcag
    10621 ctatagatgc acttaaatca aaattataat aatagagagg gaaatttatt atggggtaca
    10681 aagttgatat gtctgaagtg cacaatatgc aaaagtctat tgattcaagc ttaagtgcaa
    10741 taaatacaaa ggttagcacg cttagcagta gcataaacaa tcttataaat actgaaggat
    10801 tcgaaggtca gacagcaagt agtgtcaaaa actatagtaa gacatttcat ttacaatcaa
    10861 taaaaaagat tgaaacaata aacaaagatt ttaaatcaga tattgcgaaa tctatacgta
    10921 aattccaaag tgaagttgat aataatgctt cagctatatt ggatgaagac gaaataaaaa
    10981 aatacaaaaa agatattgat gatgcattaa aagatgtttt caaatcttct aaagatgcaa
    11041 acggagctat ttcagatgtt tcagatttaa caacagccaa aaaaataaag acagaaaacc
    11101 tggccaataa aatgggagat tttaataaag atattgatca aacggtggaa agattaacga
    11161 ccttcgacgc caacaattct atagatggtg ataagacaga taacttaata actgaattaa
    11221 gtggtgtaaa ttcatatgtc aaaaacatga agccaaaccg tgcaagaatt agttctacaa
    11281 gtggaaaaat tgaaggtgca attgcaaggc ataaaacaag tgaagagtta gtaagatggc
    11341 aaacttacat ggaaacgtta agtgaaaatc tttataaaac accaggtcta agtaaagcag
    11401 cttctgacat aattacccaa gctggacgcg agtactatgc tatcaaagct gtagggaatg
    11461 gcagtgcttt aagaggatat aaagaatatc tgaaaacacg agatattaat aaattaatta
    11521 acaaaatgaa taaaaaccaa ttaaaaagaa tgtcattggt attaaataca gatagaggta
    11581 atattaaaat aaaaaatgca gtaaaaatgg caagtgaatt tgcccgtaat aatcctttta
    11641 aaaaaggaaa tttagtaaat tggatgagca aagtccaagg gtatcaaagt gtaagtgctc
    11701 aaatattaaa aaaggggttg caagataaga actttaaata tacatttgga gatgcaaaga
    11761 aattttttga tacagctgat atgaaaaaag cagcagtcac agaatttaaa aatacctttg
    11821 taccacaaaa tataagagaa accttcttta agaaagaaaa tttaacatct aagacagcat
    11881 taaagaaaaa tatgagtaaa ttctggaatg aagatattaa gggtggaatc aaagagttta
    11941 aattagactt tgctaacaaa aatatcattg gtaaactcgg caaattgttg aaactaggag
    12001 gcaaggcttt aaaaccatta ggatttatta ctgcaattac tgacaacata ggaaagaaat
    12061 cttggcaaga aaaattagtt ggtatggggg tagatttaag tgctattggt gcaagtgcag
    12121 ctgcaggtgc agctgttgga acggcaatac cattacctgt agtaggaaca gttgcaggtg
    12181 cattagctgg agcagcagtg ggtatagctt tagattataa aataccgtat cttgataagt
    12241 ctgcaacaga attagctaaa gatggtatta actcgggtat taacaaagtt aaaagtggat
    12301 ttggaaaagt aacttcagga tttaaaacag ttttcggata agaaaggggc agtcaaatga
    12361 aaatacaaga gattgtagga aatataaaga gagcttatct gacaccatta ataatttttg
    12421 tgattttgtt ttcattattt tttgatttga taatgtattt ttatggaaac cttcaaggga
    12481 aattgccaat atatttagat gtatttctaa tatttgcagc agttgtattt attttaatgt
    12541 acttccaaga gaaaagtgga gaagttaagg ttgaaaaatc aaacgttatt cgttatttaa
    12601 cattaaatgt tgtagctggg tattcaatgg tactacttgt tgcctctatt tatgtttttg
    12661 gggtagcagg ctatggtttt gatgtattta attactggtt aggtattata ttaatgctat
    12721 ttgtatcgtg gtttgctcta tttttgtttt ataaaaatga atttgatagt gaaaatccaa
    12781 ataaagcagt taatgttata gcaattatta taaagttatc tgcttttgga ggacttttct
    12841 atatcagaac agtcgttcct aatactgcag atgaagagaa atttataact ctaagtatct
    12901 taattaatat agctgttgat ttattgctgg ttagatcata ttttaactat gcattatata
    12961 agagtgtaaa aaaagatatc gaaaacggag tggatgatta atggaagtag gaatgttaat
    13021 tatgccgttt tgtgtgaaga ttacatttga aattgataaa aatgataatt ggttaaatgc
    13081 attagataca gtaaatgaat ttttcatgga taaagatata tatccaactg gtcctataat
    13141 tttccaaaga gaattagcag gtttgggtga atataaatat acagcatata tagctcttaa
    13201 tgatgaactt caagatatac ctgaattgaa catcaaatat attgattgtt tagaggtagg
    13261 acctacgtta tcaactaagt gttttgaaga agaggaattt gaaagagctt ataaagaaat
    13321 tgaatatgta gctaacgaaa ataatattaa gatcctaaat caaccatatt atcatgtaat
    13381 ggtagattat tttggtggta cggcttttga aatttatgct caagtagatt tggatgagag
    13441 tgaagtatat ggataaaaat ggatactcat atattatgat gaaaaatgta gcttacaaaa
    13501 cttattttga tgtgactatg gatgactacg aagatatatt aaaagacttt acaaaccttg
    13561 caatttctaa aggtaaaaca attacagggc cattaacttt tgcagtcacg caaatagact
    13621 tgcaaaaaag gatgaatatt gatttgttta tttcagttgg aaaatgtttt aaatcaaatg
    13681 aagaactatc atatagaaca tatttttgtc tagataacat gttacatggt cgtatcactt
    13741 ccaacaattt tataacagat gaaatagcgt tacttgagga tatgaacgaa tttgcttctg
    13801 acaacaattt aacgtttact tcgccttatt atcacacaat gagaaaaagt tttagcggtg
    13861 aacaaggttg gattgatgta aaggccaaag tgtatgaaaa tgattaatta ataatcagta
    13921 gaggtaatat atgataattt ttattttatt aacagttttt tcactctttt atatagcgat
    13981 gattgctagt ttatttaaaa gtgaaggttt ttcaataata ggcttaatat tggatatagt
    14041 tattttgaca acattaatat tttattattt tgtaggtgcg agttttgttg ataatgattt
    14101 aagtaatttt ttagcattca tgaattttgg gtcatttgtg tatatgtact atgcaattaa
    14161 gagcttgtgg gtgaagccta agttagtaaa ttatataatt gcaaaagaaa taggcgaatc
    14221 aaaagatgtc attgaagaac aggaattaga tttacagaca tcaaagataa gaggtatcta
    14281 ctttttcatt attgcaattg ccatgctaat aattactaaa ttaagaatgc aacctgagtt
    14341 acaggcagat gctatatcga tgaatccagt ttttattttt ataggagtta ttatcatttt
    14401 aatttggcta gtactggata tatatcgtaa gaaaaaatac ggtatattct tattcaagac
    14461 gatagtgcca ttagttgtta cgacttggat tattatagct actattgtac tttcataaga
    14521 aattttcaat aattttgttt tggttataat tgttgatgga tattaattaa tcgatagaaa
    14581 aatc
//
LOCUS       DALMNS010000077        14265 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.077, whole genome shotgun sequence.
ACCESSION   DALMNS010000077 DALMNS010000000
VERSION     DALMNS010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 14265)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14265)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14265
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.077"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..159)
                     /locus_tag="O6Y56_001904"
     CDS             complement(<1..159)
                     /locus_tag="O6Y56_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575154.1"
                     /translation="MNLNIDWSKDFQEFQEILNSGIHPEWLYCAKANLVLEPSYTGEG
                     KQFFSTQDI"
     gene            403..699
                     /locus_tag="O6Y56_001905"
     CDS             403..699
                     /locus_tag="O6Y56_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDB5575155.1"
                     /translation="MRTYEVMYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWG
                     KRRLAYEINDFKDGFYNIVRVKSDNNKATDEFQRLAKISDDIIRYMVIREDEDK"
     gene            720..1223
                     /gene="ssb"
                     /locus_tag="O6Y56_001906"
     CDS             720..1223
                     /gene="ssb"
                     /locus_tag="O6Y56_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDB5575156.1"
                     /translation="MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGER
                     EADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSRNYENQEGRRVFVTEVVCDSVQF
                     LEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
                     SDDDLPF"
     gene            1275..1517
                     /gene="rpsR"
                     /locus_tag="O6Y56_001907"
     CDS             1275..1517
                     /gene="rpsR"
                     /locus_tag="O6Y56_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002484306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDB5575157.1"
                     /translation="MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKI
                     LPRRVTGTSAKYQRMLTTAIKRSRHMALLPYVKEEQ"
     gene            complement(1783..2721)
                     /locus_tag="O6Y56_001908"
     CDS             complement(1783..2721)
                     /locus_tag="O6Y56_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDB5575158.1"
                     /translation="MLNFDEQIAKLKQMNIFFNIIDTEKANEILRKNNYFFKLAYFRK
                     NFEKKNGGYFIEFAYLSDLATIDMKLRYTMLHLTLDIEHSLKCLVLKLITENNQEDGY
                     KIIDEFLCIDKSYSNSNFDTNSRTPEEVMETKIKNKNEIFKHMNKRGQLPEKLNKYYQ
                     NPPAWVCIEFMQLGQFVSFLNFYYKKYNDEELRVANILMPLVKNIRNKSAHNQPIIAN
                     LNYDSRSPQYLFEKGNNIGISRNMFGIKNFIDTFATLELHNQVCSNAIIQARYHDLDQ
                     LQKRYKRNESYYKNALAIKRFFIALDKIIDFNRPKV"
     gene            complement(2760..3502)
                     /locus_tag="O6Y56_001909"
                     /pseudo
     CDS             complement(2760..3502)
                     /locus_tag="O6Y56_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000264635.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
     gene            3681..4292
                     /locus_tag="O6Y56_001910"
     CDS             3681..4292
                     /locus_tag="O6Y56_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin"
                     /protein_id="HDB5575159.1"
                     /translation="MFKKHHSKNSIVLKSILSLGIIYGGTFGIYPKADASTQNSSSVQ
                     DKQFQKVEEVPNNSEKALVKKLYDRYSKNTINGKSNKSRNWVYSERPLNGNQVRIHLE
                     GTYTVAGRVYTPKRNITLNKEVVTLKELDHIIRFAHISYGLYMGEHLPKGNIVINTKN
                     GGKYTLESHKELQKNRENVEINTADVENVTFDLVKSVNDIEQV"
     gene            4661..5029
                     /locus_tag="O6Y56_001911"
     CDS             4661..5029
                     /locus_tag="O6Y56_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YxeA family protein"
                     /protein_id="HDB5575160.1"
                     /translation="MKTILKTITYLALTIIGAYATLFILKTIDSHGITDQFNPLVKED
                     VSYVKTTEVSTRIDNQLRSYSQSAFNKEGKETQLMYTATFDVKPHRYLKITHKGHHVE
                     TFEEVEKEEVPKKALAKLRR"
     gene            5210..5782
                     /locus_tag="O6Y56_001912"
     CDS             5210..5782
                     /locus_tag="O6Y56_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDB5575161.1"
                     /translation="MKLKSLAVLSMSAVVLTACGNDTPKDETKSTESNTNQDTNTTKD
                     VIALKDVKTSPEDAVKKAEETYKGQKLKGISFENSNGEWAYKVTQQKSDEESEVLVAD
                     KNKKVINKKTEKEDTVNENDNFKYSDAIDYKKAIKEGQKEFDGDIKEWSLEKDDGKLV
                     YNIDLKKGNKKQEVTVDAKNGKVLKSEQDH"
     gene            complement(5920..6183)
                     /locus_tag="O6Y56_001913"
     CDS             complement(5920..6183)
                     /locus_tag="O6Y56_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDB5575162.1"
                     /translation="MNMHILYNLRTKHNLEIDELAQQLNEKYGTKYEAHQIWEWENHH
                     HEPKFKDAMHLADFFDAPYEMFLESKVKEYQKHLEEVDIRMDK"
     gene            6476..6730
                     /locus_tag="O6Y56_001914"
     CDS             6476..6730
                     /locus_tag="O6Y56_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000466745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HDB5575163.1"
                     /translation="MFGFIGMLIVGGLIGWAAGAIMGKDIPGGILGNIIAGIIGSWLG
                     GTLLGHWGPELGSIYILPALIGSIILIALVTLILRAVRKK"
     gene            complement(6768..6977)
                     /locus_tag="O6Y56_001915"
     CDS             complement(6768..6977)
                     /locus_tag="O6Y56_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575164.1"
                     /translation="MTTQSFIFMNIILLDGATQRHPFFICQILAFLFPTSPHVNLLLF
                     NPILPTFLNIIIHIDHFHANKKDDN"
     gene            7155..7736
                     /locus_tag="O6Y56_001916"
     CDS             7155..7736
                     /locus_tag="O6Y56_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDB5575165.1"
                     /translation="MTIYLVRHGESKSNYDNKHFRSYFCGQLDVPLTETGTKSADDLC
                     DYFKEKQIKHVYVSDLLRTQQTFEHIFPYDIASTTTPLLRERSLGVFEGEYKDEISAN
                     PKYEKYFNDPNFKDFRHSFSQKAPEGESYEDVYQRVEHFMNHVVNEDTQKDDIVIVAH
                     QVVIRCLMVYFNNVSREEAVDLKVENCKPYIIE"
     gene            complement(7802..8185)
                     /locus_tag="O6Y56_001917"
     CDS             complement(7802..8185)
                     /locus_tag="O6Y56_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000868247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575166.1"
                     /translation="MKVRITFIILAILSTIVCLFLAAMHPTGPNTVTFEQPYLFTLNI
                     IIMVLVALPSLVLAIYDYMSFRISSALLQFLGAISWFFLSLILSLTQFTPFTLASFIT
                     SIILFVSAIITLAIGDKSVDKNDSH"
     gene            complement(8454..9080)
                     /locus_tag="O6Y56_001918"
     CDS             complement(8454..9080)
                     /locus_tag="O6Y56_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NDxxF motif lipoprotein"
                     /protein_id="HDB5575167.1"
                     /translation="MKKRLLLSTFLASTLILTGCASDQSDNEDHHTSTGIHAPKSAKK
                     LETKDIFNSDKKNSDISDAEMKQAIEKYLSVNSDILDNKYIMQHKLDKQIDSQTKVTE
                     KQAETLSHLSNLAVKNDLHFKKFVTENNIPKEYKKPVELMMNYFKALNSTIANVDEDI
                     EKLSYQPQNKINVVDVPTKYAGDVNKKQQDKIKDFLKSKGIKSDVIDK"
     gene            complement(9153..10772)
                     /locus_tag="O6Y56_001919"
     CDS             complement(9153..10772)
                     /locus_tag="O6Y56_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000887771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575168.1"
                     /translation="MLDVHFIYPGKLQNACEYFNLPTQKEGFEVTIHALRPESIHKIY
                     HDMDKTEQRFIETLISKGNPVTIVNSRDVNILKLTNHLGFVYQLNEDEFFVNNFFLRY
                     INSEVLDNAYGEFESLDTINHMNLNEEAFRVRQHTRLNDVTLEHALLLKTNDELKTIC
                     RQYGIKGFSNKNKQNLVELIMTAFFNNNHIIEQVFTNATLFEFDILSSILESDANYRL
                     NNELIEFEKLQLINFDNFLTSHFYYYYDFEYDCLILPNDVRKHIENFVNQFGNGDFEK
                     AVNQFVDEQTIEKSLAEFENALELSFMDDEVDLDMLLKDDDFEDFGTTDSLRSDAITQ
                     LISEIKKGLIDKKDILPLRIILGSVNLYGILSTNHLLYLTQRFYDATFSKEELQYSLD
                     TLAGTELYYIEDDFVFHPVLFDVVESEASGIDISDEGYYVPASVEELIYYDRHHYLKS
                     DSEIKAFTSYLRKQINMKNDIEKEKYVNEIIMLLRTIPTSKLIQPIMQLFIDNAILNN
                     VQNDALLIEKATHARNHLRLWSLQGHRNIPN"
     gene            complement(10887..12410)
                     /gene="ahpF"
                     /locus_tag="O6Y56_001920"
     CDS             complement(10887..12410)
                     /gene="ahpF"
                     /locus_tag="O6Y56_001920"
                     /EC_number="1.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
                     /protein_id="HDB5575169.1"
                     /translation="MLNADLKQQLKQLLELMEGNVEFVASLGSDDKSKELKELLTEIS
                     DMSSRLSLSEKSLKRTPSFSVNRPGEETGVTFAGIPLGHEFNSLVLAILQVSGRAPKE
                     KQSIIDQIKNLEGSFHFETFISLTCQKCPDVVQALNLMSVINPNITHSMIDGAVFREE
                     SENIMAVPAVFLNGEEFGNGRMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASG
                     SAAIYTARKGLRTGIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAHIEQYDID
                     AMTGIRATDIEKTDEAIKVTLENGAVLESKTVIIATGAGWRKLNIPGEEQLINKGVAF
                     CPHCDGPLFENKDVAVIGGGNSGVEAAIDLAGIVNHVTLFEFASELKADNVLQDRLRS
                     LSNVDIKTNAKTTEVVGEDHVTGIRYEDMSTGEEHLLNLDGIFVQIGLLPNTSWLKDA
                     VELNERGEIVIDRNNNTNVPGIFAAGDVTDQKNKQIIISMGAGANAALNAFDYIIRN"
     gene            complement(12426..12995)
                     /gene="ahpC"
                     /locus_tag="O6Y56_001921"
     CDS             complement(12426..12995)
                     /gene="ahpC"
                     /locus_tag="O6Y56_001921"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002445177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HDB5575170.1"
                     /translation="MSLINKEILPFTAQAFDPKKDQFKEVTQEDLKGSWSVVCFYPAD
                     FSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAWHDHSDAISKITYTMIGDP
                     SQTITRNFDVLDEATGLAQRGTFIIDPDGVVQASEINADGIGRDASTLAHKIKAAQYV
                     RKNPGEVCPAKWEEGAKTLQPGLDLVGKI"
     gene            13487..14242
                     /gene="nfsA"
                     /locus_tag="O6Y56_001922"
     CDS             13487..14242
                     /gene="nfsA"
                     /locus_tag="O6Y56_001922"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NADPH nitroreductase"
                     /protein_id="HDB5575171.1"
                     /translation="MSDHVYNLVKKHHSVRKFKNKPLSEDVVKKLVEAGQSASTSSFL
                     QAYSIIGIDDEKIKENLREVSGQPYVVENGYLFVFVIDYYRHHLVDQHAETDMENAYG
                     STEGLLVGAIDAALVAENIAVTAEDMGYGIVFLGSLRNDVERVREILDLPDYVFPVFG
                     MAVGEPADDENGAAKPRLPFDHVFHHNKYHADKETQYAQMADYDQTISEYYDQRTNGN
                     RKETWSQQIEMFLGNKARLDMLEQLQKSGLIQR"
BASE COUNT         4856 a         2148 c         2424 g         4837 t
ORIGIN      
        1 aatatcttga gtgctgaaaa attgtttgcc ttcgccagta taagaaggct ctaaaacaag
       61 attagccttt gcacaataaa gccattcagg atgaatgcca ctattaagta tctcttggaa
      121 ttcttgaaaa tctttagacc aatcaatatt taaattcatt ccttaccacc tcacaaccat
      181 tatagaacat gtgttcgctt ttgtgaagtg tatttttaaa aatatcatag aaaatttcaa
      241 atgaattaat gtcaaaaatg atatgaagag tagtttgaat tattattgta aaaagtaatg
      301 gcgcatgata taattcttta ttgtgagtaa tgaaaattat tccttgcttg tctgttttaa
      361 gattgataag ccgtatagac cacaaggagg tgcaaatata aaatgagaac atatgaagtt
      421 atgtacatcg tacgcccaaa cattgaggaa gatgctaaaa aagcgttagt tgaacgtttc
      481 aacggtatct tagctactga aggtgcagaa gttttagaag caaaagactg gggtaaacgt
      541 cgcctagctt atgaaatcaa tgatttcaaa gatggcttct acaacatcgt acgtgttaaa
      601 tctgataaca acaaagctac tgacgaattc caacgtctag ctaaaatcag tgacgatatc
      661 attcgttaca tggttattcg tgaagacgaa gacaagtaat aattagaggg ggcgtttaaa
      721 tgctaaatag agttgtatta gtaggtcgtt taacgaaaga tccggaatac agaaccactc
      781 cctcaggtgt gagtgtagcg acattcactc ttgcagtaaa tcgtacgttc acgaatgctc
      841 aaggggagcg cgaagcagat tttattaact gtgttgtttt tagaagacaa gcagataatg
      901 taaataacta tttatctaaa ggtagtttag ctggtgtaga tggtcgctta caatcccgta
      961 attatgaaaa tcaagaaggt cgtcgtgtgt ttgttactga agttgtgtgt gatagcgttc
     1021 aattccttga acctaaaaat gcgcaacaaa atggtggcca acgtcaacaa aatgaattcc
     1081 aagattacgg tcaaggattc ggtggtcaac aatcaggaca aaacaattcg tacaacaatt
     1141 catcaaacac gaaacaatct gataatccat ttgcaaatgc aaacggaccg attgatataa
     1201 gtgatgatga cttaccattc taataaaaat taacgaaatt aaagcgaaaa aattatcaaa
     1261 ggaggcacac aatcatggca ggtggaccaa gaagaggcgg acgtcgtcgt aaaaaagtat
     1321 gctatttcac agcaaatggt attacacata tcgactacaa agacactgaa ttattaaaac
     1381 gttttatctc agagcgcggt aaaattttac cacgtcgtgt aactggtact tcagctaaat
     1441 atcaacgtat gttgactaca gctatcaaac gttctcgtca tatggcatta ttaccatatg
     1501 ttaaagaaga acaataatat ataatttatt gtcaaacccc gtaggcatag gcttacgggg
     1561 ctttttgtgt tttgggatat agaaaaagag caaaaaagga tgatatgaat gttttgtgtt
     1621 cgggatttgc acaaagatat gtttatattg caaaaataat atgaatttag atgcataaaa
     1681 aaagaactac gcattttaaa taaaatgcat agctcttctt tttcttgcat acgaattaaa
     1741 ataactcgcg agacctataa gtctctttcc tcactagaca gtttatactt ttggtctgtt
     1801 gaagtcaata attttatcta aagctataaa aaatcttttg atagctaatg catttttata
     1861 atagctttcg tttcttttat atcgcttttg aagttggtcc aaatcgtgat atcttgcttg
     1921 gataattgca ttactacaaa cttgattatg caattctagc gtagcgaaag tatctatgaa
     1981 attttttatt ccgaacatgt ttctagatat gcctatatta ttcccttttt caaataaata
     2041 ttgaggagat ctactgtcat aatttagatt tgctatgatg ggttggttat gagctgattt
     2101 gtttcttata tttttaacta aaggcattaa aatattagca actctcaatt cttcgtcatt
     2161 gtacttcttg taatagaagt tgagaaacga aacgaattga cctagttgca tgaattcaat
     2221 gcaaacccat gcgggtggat tttgatagta tttattcaac ttctcgggta gttgtcctcg
     2281 tttattcata tgcttgaata tttcgttttt atttttgatt ttggtttcca taacttcttc
     2341 tggtgttctt gaatttgtgt caaaatttga attgctatat gatttatcaa tacataagaa
     2401 ctcatctatt attttataac catcttcttg gttattttct gttattagtt ttaagactag
     2461 acactttaaa ctatgttcaa tatctaaagt taaatgcaac attgtgtatc ttaatttcat
     2521 atctatagtt gctaaatctg ataaataagc aaattctatg aaatagccgc cattcttttt
     2581 ttcgaaattt tttcggaaat aagctagttt gaagaagtaa ttattttttc taagaatttc
     2641 atttgctttt tcggtgtcaa taatattaaa aaatatattc atctgtttta atttcgctat
     2701 ttgctcatca aaattgagca taggcttaat ttctgctagt gtatcatctt tttccaatat
     2761 taactcccca atcgttcaaa tttattcatc atatctttcg ccatctgatt agtaacatgt
     2821 gtgtatatct ctagattttt ttataatcag aatgacctac atgctcttgt attgctttta
     2881 agttaattcc taattgagca agtgtagata tatgcgaatg atgtaatgta tgcgtcgtta
     2941 caggtttctt aatagaacta atctcagttg tctctttgat agtgccccct ttaataatgt
     3001 tatttatttt gtttaagtcg ataggaccac cagctacatt tgtgaatatg taccctatat
     3061 taataaactt atcattccaa gcataagtgt tcttagtatg ttgatgcttt ggatagtgag
     3121 ccctatggcc ctatagctat tacttctttc agttgtctcc tttactccga atgctcccgt
     3181 ctttttttca gttatccaat taattgtacc atcgatatct agcgttttat cttcatagtt
     3241 tatattttct ctctttattg caagtagctc accgatacgc atgccattag caatttgaaa
     3301 ctgtaccata gcttttacca ctttataatt acgttttgtc gttgggtatt tttatactta
     3361 attacatagt cgaaacaatc cggtatttct ttcactacat tatcttctaa agtgttatta
     3421 cgttcagcta gtaacgcatc actataggga tatctatttt atctattaca catataactt
     3481 tgaattgctt actattataa attaataaat tctattctct tagatttagt ccaattatgt
     3541 gtaaacgatt tatagttatt aaattcagag tggtagcaaa ttaaagttaa tcaagagtta
     3601 agatgaattt aattcatgaa cacgtctatt atttttataa ttgtagcaaa taaagcttta
     3661 catcaaggag gtagttaaat atgttcaaaa aacatcattc gaaaaattca atcgtattaa
     3721 aatctattct atcgctaggt atcatctatg ggggaacatt tggaatatat ccaaaagcag
     3781 acgcgtcaac acaaaattcc tcaagtgtac aagataaaca attccaaaaa gttgaagaag
     3841 taccaaataa ttcggaaaaa gctttggtta aaaaactgta cgatagatac agtaaaaata
     3901 caataaacgg aaaatctaat aaatctagga attgggttta ttcagagaga cctttaaatg
     3961 gaaatcaagt tcgcatacat ttagaaggta catacacagt tgctggcaga gtgtatacac
     4021 ctaagaggaa cattactctt aataaagaag ttgtcacttt aaaagaattg gatcatatta
     4081 taagatttgc tcatatttct tatggcttat atatgggaga acatttgcct aaaggtaaca
     4141 tcgtcataaa tacaaagaat ggcggtaaat atacattaga gtcgcataaa gagctacaaa
     4201 agaataggga aaatgtagaa attaatacag ctgatgtgga aaatgtcact tttgatcttg
     4261 tgaaaagtgt taatgacatt gaacaagttt gaaattaagt taaattagta tatacagtgt
     4321 tttatcgcta atactttgaa agttaggtat ctaaaggtgc ctagctttct ttgttatgat
     4381 tagcaccatc atatagaaaa ttctttaatg acgtttatgc cgaaatctac aaaaataatt
     4441 tctcttttat ggttaatcaa tatgttttta cattcgacaa ccttaaaatt aacttctttc
     4501 aattccataa taaagtccct ataaaataac ttagtttaaa aacgattcgt atctttcaga
     4561 ttcaaatacc atcattttct cctaagactt acattttaat tacaattatg taagttgttt
     4621 tcagagacat cctattttat attttgtcag aggtgatctt ttgaaaacga ttttaaaaac
     4681 aataacatat cttgcactta ctatcattgg cgcttatgct actttattca ttttaaaaac
     4741 aatagactct catggtataa cagatcaatt taacccatta gtaaaggaag atgtttctta
     4801 tgttaaaacg acagaggtgt ctactagaat agataatcaa ctccgaagtt atagtcaaag
     4861 tgcttttaat aaagaaggga aagagacgca attaatgtat actgctacat ttgatgttaa
     4921 accgcataga tacttgaaaa ttacacataa aggtcatcat gtagaaactt ttgaagaagt
     4981 tgaaaaggaa gaagtaccaa agaaagcatt agccaaattg aggcgataat aacgggttta
     5041 tattacatgg ttcattttaa agatgagtac gaaatgaagt gacacatgaa gagtaattta
     5101 aaaaaatttg taataattat gaatagaatt aaaaacaagg ggtaatacaa tctatatagc
     5161 atataagctt ttgttatgag tttcaaaaaa aggaagagag agtgatatta tgaaattaaa
     5221 atcattagca gtgttatcaa tgtcagcggt ggtgcttact gcatgtggca atgatactcc
     5281 aaaagatgaa acaaaatcaa cagagtcaaa tactaatcaa gacactaata caacaaaaga
     5341 tgttattgca ttaaaagatg ttaaaacaag cccagaagat gctgtgaaaa aagctgaaga
     5401 aacttacaaa ggccaaaagt tgaaaggaat ttcatttgaa aattctaatg gtgaatgggc
     5461 ttataaagtg acgcaacaaa aatctgatga agagtcagaa gtacttgttg ctgataaaaa
     5521 taaaaaagtg attaacaaaa agactgaaaa agaagataca gtgaatgaaa atgataactt
     5581 taaatatagc gatgctatag attacaaaaa agccattaaa gaaggacaaa aagaatttga
     5641 tggtgatatt aaagaatggt cacttgaaaa agatgatggc aaacttgttt acaatatcga
     5701 tttgaaaaaa ggtaataaaa aacaagaagt tactgttgat gctaaaaacg gtaaagtatt
     5761 aaagagtgag caagatcact aaaatatgtc gtaatactaa tgataataac atgtcttaat
     5821 tcatattaat tattaaaata ccctcgcaac gcaatgtaat atatccagta tagatttgaa
     5881 aggatatatg cctaacgtgt tgtgagggtt tatttgcatc tatttatcca tgcgaatatc
     5941 gacttcttct aaatgtttct gatattcttt aaccttactt tctaaaaaca tttcatatgg
     6001 tgcatcaaag aaatcagcta aatgcatggc atctttaaat ttaggttcat ggtgatgatt
     6061 ctcccattcc caaatttgat gtgcttcata tttagtacca tatttctcat ttaattgttg
     6121 tgctaattcg tcaatttcta aattatgttt agttcgtaag ttatataaaa tatgcatatt
     6181 cattgttcat taacctcgct tcttgattta aaattcaaag atgctctaat aatatgtgta
     6241 tattctagtc ctataacata aaataatcaa gctatgaatt cgccagaaaa aataatgtat
     6301 atgatattac cggtacagag actttaaata acgatagcta cattgaataa aattgatatt
     6361 caattactac tttgaaaaat atttagataa aaataattga atttgtttta gaaagtctaa
     6421 taacgggtac tacttagaat aacgcaaaat aaatagaaaa aggagactga aaattatgtt
     6481 tggatttatt ggaatgttaa ttgtcggtgg cttaattgga tgggctgctg gtgctattat
     6541 gggtaaagat atcccaggtg gtattttagg taatattatc gcaggtatta ttggatcatg
     6601 gttaggtgga acattattag gacattgggg tcctgaacta ggaagcattt acatcttacc
     6661 agctttaatt ggttcaatta tcttaattgc actggtaact ttaattttaa gagctgttcg
     6721 taaaaaataa aatattcaac ttggttgaat tgaaatcaag atggcattca gttgtcatct
     6781 tttttatttg cgtgaaaatg gtcaatatgt attataatat ttaaaaatgt aggtaagata
     6841 ggattaaaaa gtaataaatt aacatgagga gaggttggaa ataaaaaagc gagtatttga
     6901 caaataaaaa aaggatgacg ttgggttgcg ccatccagga gtattatgtt catgaatata
     6961 aaagactgtg tagtcattta agaactacac ccatatagta acacatcact tgattaaaga
     7021 caatactatt tttagagtca ttaatttaaa atatgaatta attatttttt tagaatagaa
     7081 tattaagatt gatatcgaat tagtagtcaa agtgttatgg tagatatgaa atacataagg
     7141 taaggagtaa tattatgacg atttatttag ttagacatgg cgaatcaaaa tcgaattatg
     7201 ataataaaca ttttagatct tatttttgtg gacaattaga tgtgccgtta acggaaactg
     7261 gcacaaaaag tgcagacgat ttatgtgatt attttaaaga gaaacagatt aaacatgtat
     7321 atgtttcaga cttattaaga acacagcaaa cgtttgaaca tatttttcca tatgacattg
     7381 catcaacgac tacgcctcta ttaagagaac gttcacttgg cgtatttgag ggtgaatata
     7441 aagatgaaat cagtgcgaat ccgaaatatg aaaaatattt caatgatcca aactttaaag
     7501 actttcgtca tagtttttca caaaaagcgc ctgaaggaga aagttatgaa gatgtatatc
     7561 aacgcgtaga acattttatg aatcatgttg tcaatgaaga tacacaaaaa gatgatatcg
     7621 tcattgttgc acatcaagtt gtcattcgtt gtttaatggt ttattttaat aacgtttcac
     7681 gggaagaagc tgtggattta aaagttgaaa attgcaaacc atatatcatt gaatagaagt
     7741 atagaggttc tgaaaagctg tgttttatag cgtccttcag aacctttttt gcatttggaa
     7801 tttaatggga atcattctta tcaacagact tatcaccaat agctaatgtg ataattgcgc
     7861 ttacgaacaa aataattgaa gttataaatg acgctaatgt aaaaggtgta aattgtgtga
     7921 gcgataatat caatgataaa aagaaccaag agatcgcccc tagaaattgt aaaagagcag
     7981 aagaaattct aaaactcata taatcatata tagctaaaac aagtgaaggt aatgcgacta
     8041 ataccattat aatgatgttg agggtgaata aatatggctg ttcaaaagtt actgtgtttg
     8101 gtcctgttgg atgcattgct gctaagaaca agcaaacaat cgtcgataaa attgctaaaa
     8161 taataaaagt aattcgaact ttcatcatga ccatcctttg tttatagagt caatataagt
     8221 atgaaatatg ttagggatat agtcaaatgc gtcaattaat ggggatttta ggatggatag
     8281 agaatttaag accaataaaa aagcatcaaa cagtaataag ctgcttgatg caaaatggta
     8341 tggtattggt taaaatgtat tgttttaaag attagtcact tttaaagata aagaattgtc
     8401 atgaattaaa gctcatgtaa tgatgtgtta catgtcgcaa tgatggcatt cagttattta
     8461 tcgataacat cacttttgat acctttagat tttaagaaat ctttaatttt atcttgttgc
     8521 tttttattaa catcaccggc atattttgtt ggcacgtcga ctacattgat tttattttgc
     8581 ggttgatagc taagcttttc aatatcttca tcaacattgg cgattgtact atttaaagct
     8641 ttgaagtaat tcatcattaa ttcaacgggt ttcttatatt ctttaggaat attgttttca
     8701 gtgacaaatt tcttgaaatg caaatcgttt ttaacagcta agttagataa gtggctaagt
     8761 gtttctgctt gtttttcagt cacttttgtt tgactgtcaa tttgtttatc tagtttatgt
     8821 tgcattatat atttgttatc aagtatatcg ctatttacag acaaatactt ttctatagct
     8881 tgcttcatct ctgcatcact aatatcacta tttttcttat ctgagttaaa gatatctttt
     8941 gtttctaatt ttttagcgct tttaggtgca tggatgccag tacttgtgtg atgatcttcg
     9001 ttatcagatt gatcggacgc gcaacctgta agaattaatg tcgatgctaa aaatgtactt
     9061 agtagtaatc tctttttcat aatgtaatat aactccttag tttatcttta attgaaaaaa
     9121 tatgtattca tgtttaatag agtaacgttg aattagtttg gaatgttacg atgaccttgc
     9181 aatgaccata gacgtaaatg attacgtgca tgagttgctt tttctatcaa taatgcatca
     9241 ttttggacgt tgttaaggat agcattatct ataaataact gcataattgg ttgtatcaat
     9301 ttagatgtag gtatcgtacg taaaagcata atgatttcat tcacatactt ttccttctca
     9361 atatcatttt tcatattgat ttgtttgcgt agataacttg tgaacgcttt aatttctgaa
     9421 tcagatttca aatagtggtg tctatcataa tagattaatt cctcaacaga agctggtaca
     9481 tagtatcctt catcagaaat atcaatgcct gacgcctcag actcgacaac atcaaataac
     9541 acagggtgaa acacgaagtc atcttcaata taatatagct cagtaccagc taaagtatct
     9601 aagctatatt gcaactcttc tttactaaaa gtagcgtcat aaaatctttg tgtgagatat
     9661 agtagatgat tagttgataa aataccatac aagtttacag aaccaagtat aatacgaaga
     9721 ggtaaaatat cttttttatc tattaatcct ttcttaatct cagaaatcaa ttgagtgatt
     9781 gcatcacttc ttaagctatc ggttgtacca aaatcttcaa agtcatcatc tttaagtaac
     9841 atatctaagt caacttcgtc gtccataaat gataactcta acgcgttttc aaactctgct
     9901 aaacttttct caattgtttg ctcgtcaaca aactgattta cagctttctc aaaatcacca
     9961 ttgccgaatt gattcacgaa attttcaata tgtttacgca catcatttgg caaaataaga
    10021 caatcatatt caaagtcgta ataataataa aaatgactag ttaaaaagtt gtcaaaattt
    10081 attaattgta gcttttcaaa ttcaattagt tcattgttta atcggtagtt agcatcactt
    10141 tcaagtatgc tagaaagaat atcaaactca aatagagtag cattagtaaa cacttgttca
    10201 atgatgtgat tattattgaa aaatgctgtc ataattaatt caacaagatt ttgtttgttt
    10261 ttatttgaga atcctttgat accatactgc ctgcatattg tttttagctc gtcattagtt
    10321 tttaacagta aagcatgttc taatgtgaca tcgtttaagc gcgtatgctg tcttacacga
    10381 aaggcttctt catttaaatt catatggttt attgtatcta acgattcgaa ttcaccatat
    10441 gcattatcta gtacctctga attgatatat cttaaaaaga aattatttac aaagaactca
    10501 tcttcgttaa gttgataaac aaaacctagg tgatttgtta gctttaaaat attaacatca
    10561 cggctattta cgattgtgac agggttaccc ttagatataa gtgtttctat aaatctttgt
    10621 tctgtcttat ccatatcatg ataaatttta tgtatacttt cagggcgtaa agcatgaatc
    10681 gtgacttcaa atccttcttt ttgggtcggt aaattaaaat attcgcatgc attttgtaat
    10741 tttcctgggt atataaaatg aacatcaagc atttttgcac acctcgttgt atatattaag
    10801 tttatcataa catgatttta tgtcgggata aaaaaataac agcatcttaa caaatgtaag
    10861 atactgtcag tggaatgaat gaaactttag tttctgataa tatagtcaaa ggcatttaat
    10921 gctgcatttg caccagcgcc cattgaaata ataatttgtt tgttcttctg atctgtgaca
    10981 tcgccagctg cgaatattcc aggtacgtta gtattattgt tacgatcaat aacaatttca
    11041 ccacgttcgt ttaattcaac agcatctttt aaccatgatg tgtttggaag taaaccaatt
    11101 tgaacaaaga taccatctaa gttaagtaga tgttcttcgc cggtgctcat gtcttcgtaa
    11161 cgtatacctg taacatggtc ttctccgaca acttcagtag ttttggcatt tgttttgata
    11221 tcaacatttg ataaagaacg taaacgatct tgtaacacgt tgtctgcttt taattcgcta
    11281 gcgaattcga ataatgttac gtgattaact ataccagcaa ggtcaattgc tgcttcaact
    11341 ccagagttac cgccaccgat aactgctacg tctttatttt caaatagagg tccgtcacag
    11401 tgagggcaga atgcaacacc tttattaatc aattgctctt cacctggaat gtttagctta
    11461 cgccaacctg caccagtagc gataatgact gttttacttt ctaagacagc accgttttct
    11521 aacgtaactt taattgcttc gtcagtcttt tcgatatctg tagcacgaat gcctgtcatt
    11581 gcatcaatgt catattgttc aatgtgcgct gctaagttag aagaaaattc agaaccagtt
    11641 gtttctttaa cagtaatgaa gttctcaata ccagcagtat cattaacttg gccaccgata
    11701 cgatcagcaa ctataccagt acgtaaacct ttacgtgctg tgtaaatcgc tgcactacca
    11761 ctagcaggac caccaccaac gattaagaca tcataaggtt ctttattttc aaactcagat
    11821 gcatctgccg tactacctag tttagaaaga atatcttgga ttgtcatacg accattgcca
    11881 aattcttcac catttaaaaa gacagcagga actgccatga tgttttcaga ttcttcacgg
    11941 aacaccgcac catcaatcat agaatgcgtg atgttagggt tgatcacact cattaagtta
    12001 agtgcttgaa cgacatcagg acatttttga cacgttaaac taatgaatgt ttcaaaatgg
    12061 aatgaacctt ctaagttttt aatttggtca atgattgact gcttttcttt aggtgcacga
    12121 ccactaacct gtaaaattgc taaaacaagt gagttaaact cgtgacctaa tggaatacct
    12181 gcaaatgtta cacctgtttc ttcgccagga cgattgactg agaaacttgg tgtacgtttt
    12241 aaagactttt cagaaagtga aagtctagat gacatatcag aaatttctgt taataattct
    12301 ttgagttcct tagatttatc atctgaacca aggctggcaa cgaattcaac gttgccctcc
    12361 attagttcta ataattgttt aagttgttgt tttaaatcag cattaagcat ggttgtaatg
    12421 cctccttaga ttttacctac taaatctaaa ccgggttgca atgttttagc gccttcttcc
    12481 catttagctg ggcatacttc gccagggttt ttacgaacat attgagctgc tttgattttg
    12541 tgagctagtg tactagcgtc acggccaatt ccgtcagcgt taatttcaga tgcttgtaca
    12601 acaccgtctg ggtcgataat gaatgtacca cgttgagcta aaccagtagc ttcatctaat
    12661 acatcaaaat tacgagtgat tgtttgtgat gggtcaccaa tcatagtgta agtgattttg
    12721 ctaattgcat ctgaatggtc atgccatgct ttgtgtacga agtgagtatc agttgatact
    12781 gagaatacat ttacgcctaa tttttgtaat tcttcatatt ggttttgtaa gtcttctaat
    12841 tcagttggac aaacaaatga gaagtcagca ggatagaagc atactacgct ccaagaacct
    12901 tttaaatctt cttgtgtaac ttctttaaat tgatcttttt ttggatcgaa agcttgcgct
    12961 gtaaatggta agatttcttt gttaattaat gacataaata tcttcctcct aagaatttaa
    13021 gtatgaatta gaactatcaa ttgattgtgc ttaattataa taattctaat ctcttagtta
    13081 gcattattac attttgatcc agaatagtca actggataac tttgtaaagt gaacgattac
    13141 ttttaaaata aagaaagata atataaagtg ctttgataat ggattttgta gtcgatgatt
    13201 taaaaggttg tgtctatatt taatatcttg attttaatgt aaaaaatgta aaaaaagaag
    13261 atttgtattc tcaactaagt caaccttatt gataatggcg tgagaatatt tgttcgagat
    13321 ggatgaaggt aatgcgtgag aagctggatt ttttaagtac gagacaatat ttttggaagt
    13381 tcaattatta acttataagc aaataattgc tataaaaaag tttggacgtg tacaattgca
    13441 atatgaagat ttttaattaa ctgtaaagta tcgaggagtg gataacgtgt cagatcatgt
    13501 atataatctt gtgaaaaagc atcattctgt tagaaaattt aagaataaac ctttaagtga
    13561 agacgttgtt aagaaattgg tagaagctgg acaaagcgct tcgacgtcaa gtttcctaca
    13621 agcatactca attattggta tcgacgatga gaagattaaa gaaaatttac gagaagtttc
    13681 tggtcaacct tatgttgtag aaaatggcta tttattcgtc tttgttattg attattatcg
    13741 tcatcattta gttgatcaac atgctgaaac tgatatggaa aatgcatatg gttcaacgga
    13801 aggtttgcta gtaggtgcaa tcgatgcagc attagttgcc gaaaatattg cggtaactgc
    13861 tgaagatatg gggtatggca ttgtcttttt aggatcatta agaaatgatg ttgaacgcgt
    13921 tcgagaaatt ttagacttac ctgactatgt cttcccggta tttggtatgg cagtagggga
    13981 acccgcagat gacgaaaatg gtgcagccaa gccacgctta ccatttgacc atgtcttcca
    14041 tcataataag tatcatgctg ataaggaaac acagtatgca caaatggcag attacgatca
    14101 gacaatcagc gagtactatg atcaacgtac aaacgggaat cgcaaagaaa catggtcgca
    14161 gcaaattgag atgttcctag gaaacaaagc aagattagat atgttagaac aattgcaaaa
    14221 atcaggctta atacagcgat agcaagatac caaaataacc cgccc
//
LOCUS       DALMNS010000078        14222 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.078, whole genome shotgun sequence.
ACCESSION   DALMNS010000078 DALMNS010000000
VERSION     DALMNS010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 14222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14222
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.078"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(281..847)
                     /locus_tag="O6Y56_001923"
     CDS             complement(281..847)
                     /locus_tag="O6Y56_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDB5575172.1"
                     /translation="MKGLIIIGSAQVNSHTSALARYLTEHFKTHDIEAEIFDLAEKPL
                     NQLDFSGTTPSIDEIKQNMKDLKEKAMAADFLILGTPNYHGSYSGILKNALDHLNMDY
                     FKMKPVGLIGNSGGIVSSEPLSHLRVIVRSLLGIAVPTQIATHDSDFAKNEDGSYYLN
                     DSEFQLRARLFVDQIVSFVNNSPYEHLK"
     gene            complement(867..1736)
                     /locus_tag="O6Y56_001924"
     CDS             complement(867..1736)
                     /locus_tag="O6Y56_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDB5575173.1"
                     /translation="MIKLIATDMDGTLLNAAHEISQPNIDAIKYAQEQGITVVIATGR
                     AFYEAQAPVADTDLTVPYICLNGAEVRDETFNVMSTSHLNKSLVHKITNVLKDAGIYY
                     QVYTSRAIYTEDPQRDLDIYIDIAERAGQHANVERIKNGIQRRIDNGTLKVVDNYDAI
                     ENIPGELIMKILAFDGNLEKIDKASKILAESPNLAISSSSRGNIEITHSDAQKGIALE
                     TIAERLGIEMKDVMAIGDNLNDLSMLEKVGYPVAMENGAEEVKKIAKYVTDTNENSGV
                     GKAIMKLLREQQV"
     gene            complement(1883..2353)
                     /locus_tag="O6Y56_001925"
     CDS             complement(1883..2353)
                     /locus_tag="O6Y56_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HDB5575174.1"
                     /translation="MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLR
                     ETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGA
                     DDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEVCSTLLTTFFKNLRANKKSTN"
     gene            2420..3037
                     /locus_tag="O6Y56_001926"
     CDS             2420..3037
                     /locus_tag="O6Y56_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HDB5575175.1"
                     /translation="MNKPFIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSD
                     FYEDISKWSFQTEMFFLCNRYKQFQDVTQLNQGVVSDYHIHKNKIFAKNTLSSVEFQK
                     FSKIYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQIEDEYLLKLKKDYREY
                     YESLQSNGSNVVLIDTTSIDFLKNEQDYEDILHIILPMIGDITNE"
     gene            3030..3692
                     /locus_tag="O6Y56_001927"
     CDS             3030..3692
                     /locus_tag="O6Y56_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HDB5575176.1"
                     /translation="MNNYGIPQNAIITIAGTVGVGKSTLTQALADKLNFKTSFENVEH
                     NPYLDKFYSDFERWSFHLQIYFLAERFKEQKRMFEYGGGFVQDRSIYEDVDIFAKMHE
                     EEGTMSKEDFKTYSDLFNAMVMTPYFPKPDVMIYLECNYDEVIDRIIERGREMEINTD
                     PEYWKKLFKRYDDWINSFNACPVVRININEYDIHKDPDSLNPMIDKIARIIKTYRQVD
                     TR"
     gene            complement(3808..4491)
                     /locus_tag="O6Y56_001928"
     CDS             complement(3808..4491)
                     /locus_tag="O6Y56_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDB5575177.1"
                     /translation="MEWILFDKDGTLIEFDRSWEKIGVRFVQSLLETFPVHNKEATLR
                     QLGVIKESIDPKSVMGSGSLQQIIQAFNDVTGQDTTDWSKSTSQKLVDERIPEINWVE
                     GVKEALIDLKAKGYQLGIVTSDTKKGVEQFLAHTNATSLFDLIISTEADAYEKPNPKV
                     LSPLFEQYNVDPQKVAIVGDTANDMKTASNANLGMAIGVLTGIATKEELHEADIILNS
                     AADILEALN"
     gene            complement(4741..5817)
                     /locus_tag="O6Y56_001929"
     CDS             complement(4741..5817)
                     /locus_tag="O6Y56_001929"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HDB5575178.1"
                     /translation="MSQAVKVERRETLKQKPNTSQLGFGKYFTDYMLSYDYDADKGWH
                     DLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYKRDGEVALFRPEENFKRLNNSLARLE
                     MPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFATEGALGVGASHQYKLLII
                     LSPSGAYYGGETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQ
                     VLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVE
                     ERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLY
                     DIYTGIQNGTLEDKNGWRVVVPKY"
     gene            complement(6153..7118)
                     /locus_tag="O6Y56_001930"
     CDS             complement(6153..7118)
                     /locus_tag="O6Y56_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HDB5575179.1"
                     /translation="MKKIMITGALGQIGTELVVKCREIYGTDNVLATDIREPEADSPV
                     QNGPFEILDVTDRDRMFELVRDFETDSLMHMAALLSATAEKNPILAWDLNMGGLMNAL
                     EAARTYNLHFFTPSSIGAFGDSTPKVNTPQVTIQQPTTMYGVNKVAGELLCQYYFKRF
                     GVDTRSVRFPGLISHVKEPGGGTTDYAVEIYFKAVREGHYTSFIDKGTYMDMMYMDDA
                     IEAIIKLMEADDAKLETRNGYNLSAMSFDPEMVKEAIQEYYPNFTLDYDVDPIRQGIA
                     NSWPDSIDTSCSRGEWGFDPKYDLASMTKLMLEAIEQKDTVKNNN"
     gene            complement(7332..8969)
                     /locus_tag="O6Y56_001931"
     CDS             complement(7332..8969)
                     /locus_tag="O6Y56_001931"
                     /EC_number="2.7.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulokinase"
                     /protein_id="HDB5575180.1"
                     /translation="MSYSIGIDYGTASGRVFLINTTNGQVVSKFVKPYTHGVIESELN
                     GLKIPHTYALQNSNDYLEIMEEGISYIVRESKIDPVNIVGIGIDFTSSTIVFTDENLN
                     PVHNLKQFKNNPHAYVKLWKHHGAYKEAEKLYQTAIENNNKWLGHYGYNVSSEWMIPK
                     IMEVMNRAPEIMEKTAYIMEAGDWIVNKLTNKNVRSNCGLGFKAFWEEETGFHYDLFD
                     KIDPKLSKVIQDKVSAPVVNIGEAVGKLDDKMAQKLGLSKETMVSPFIIDAHASLLGI
                     GSEKDKEMTMVMGTSTCHLMLNEKQHQVPGISGSVKGAIIPELFAYEAGQSAVGDLFE
                     YVAKQAPKSYVDEAANRNMTVFELMNEKIKHQMPGESGLIALDWHNGNRSVLSDSNLT
                     GCIFGLTLQTKHEDIYRAYLEATAFGTKMIMQQYQDWHMEVEKVFACGGIPKKNAVMM
                     DIYANVLNKKLIVMDSEYAPAIGAAILGAVSGGAHNSINDAVDAMKEPILYEINPEAE
                     KVQRYETLFKAYKALHDIHGYKKANIMKDIQRLRVEG"
     gene            complement(9128..10006)
                     /gene="hchA"
                     /locus_tag="O6Y56_001932"
     CDS             complement(9128..10006)
                     /gene="hchA"
                     /locus_tag="O6Y56_001932"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase HchA"
                     /protein_id="HDB5575181.1"
                     /translation="MSQDVNELSKQPTPDKAEDNAFFPSPYSLSQYTAPKTDFDGVEH
                     KGAYKDGKWKVLMIAAEERYVLLENGKMFSTGNHPVEMLLPLHHLMEAGFDVDVATLS
                     GYPAKLELWAMPTEDEAVISTYNKLKEKLKQPKKLEDVIKNELGPDSDYLSVFIPGGH
                     AAVVGISESEDVQQTLDWALENDRFIVTLCHGPAALLSAGLNREKSPLEGYSVCVFPD
                     SLDEGANIEIGYLPGRLKWLVADLLTKQGLKVVNDDMTGRTLKDRKLLTGDSPLASNE
                     LGKLAVNEMLNAIQNK"
     gene            complement(10268..11455)
                     /locus_tag="O6Y56_001933"
     CDS             complement(10268..11455)
                     /locus_tag="O6Y56_001933"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HDB5575182.1"
                     /translation="MVQSLHEFLEENINYLKENGLYNEIDTIEGANGPEIKINGKSYI
                     NLSSNNYLGLATNEDLKSAAKAAIDTHGVGAGAVRTINGTLDLHDELEQTLAKFKGTE
                     AAIAYQSGFNCNMAAISAVMNKNDAILSDELNHASIIDGCRLSKAKIIRVNHSDMDDL
                     RAKAKEAVESGQYNKVMYITDGVFSMDGDVAKLPEIVEIAEEFGLLTYVDDAHGSGVM
                     GKGAGTVKHFGLQDKIDFQIGTLSKAIGVVGGYVAGTKELIDWLKAQSRPFLFSTSLA
                     PGDTKAITEAVKKLMASTELHDKLWDNAQYLKNGLSKLGYDTGESETPITPVIIGDEK
                     TTQEFSKRLKDEGVYVKSIVFPTVPRGTGRVRNMPTAAHTKDMLDEAIAAYEKVGKEM
                     KLI"
     gene            11626..12801
                     /locus_tag="O6Y56_001934"
     CDS             11626..12801
                     /locus_tag="O6Y56_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDB5575183.1"
                     /translation="MLDWFQLANNKENKTIQLRRYLHQYPELSFKEFQTHDYIVNQLS
                     QLSCDIETPIGRNGIKATFKGLGTGPTIALRADFDALPVEELNDVPYKSKNPGCMHAC
                     GHDGHTAILLTVAEILDEHKHLLEGNVVLIFQYGEEIMPGGSQEMIDAGCLENVDRIY
                     GTHLWSGYPTGTIHSRAGAIMASPDEFSVTIKGRGGHGAKPHETIDPIVIMAEFILSA
                     QKIISRTIDPVKQAVLSFGMIQAGTTDSVIPDQAFCKGTVRTFDSDIQNHVMDKMDKL
                     LQGLAIANDINYDLNYIKGYLPVHNNEKAYQVIKEATNDIHVRFNESDLMMIGEDFSH
                     YLKVRPGAFFLTGCGNESKGITAPHHNPKFDIDEKSLKYAVAVFLKIIELEQVFKTN"
     gene            complement(13083..>14222)
                     /gene="tuf"
                     /locus_tag="O6Y56_001935"
     CDS             complement(13083..>14222)
                     /gene="tuf"
                     /locus_tag="O6Y56_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDB5575184.1"
                     /translation="GTIGHVDHGKTTLTAAIATVLAKNGDSVAQSYDMIDNAPEEKER
                     GITINTSHIEYQTDKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTR
                     EHILLSRNVGVPALVVFLNKVDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVIAGSA
                     LKALEGDAQYEEKILELMEAVDTYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVE
                     RGQIKVGEEVEIIGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQ
                     VLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHLPEGTE
                     MVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK"
BASE COUNT         4477 a         2632 c         2031 g         5082 t
ORIGIN      
        1 atatgaattt cagtttaaga attgaaattt ttaatacttt ttttcttaaa ttgttttaaa
       61 ttatttatct atatttttta acctcacttt taatctaagc ttgttttcat ttcgctatta
      121 catcttattt taattaataa cattgcttac aacagtaaac tcaaaggctt actattggtg
      181 cattagaaca aaaaaatagg catgtgactt aaaagcattc tcaatgaaat accttaagct
      241 acatacctat ttttaatgta tatttacata ttttttaata ttattttaaa tgttcatatg
      301 gactattatt cacaaaagat acaatttgat cgacaaataa tcttgctcgt aattggaatt
      361 cactatcatt taagtaatat gaaccatctt catttttagc aaaatcagaa tcatgtgttg
      421 ctatttgagt tggtacagca atgcctagta aacttctgac gattactctt aaatgtgaca
      481 atggctctga actaacaata ccaccactat ttcctattaa gcctacaggt ttcattttaa
      541 aataatccat atttagatga tctaatgcat ttttcaatat tccagaatat gaaccatgat
      601 agtttggcgt tcctaatatt aaaaagtccg ccgccattgc tttctctttt aaatctttca
      661 tattttgttt gatttcatca atagacggtg ttgttcctga aaaatctaat tgatttaacg
      721 gtttttctgc taaatcgaat atttccgctt caatatcatg tgttttaaaa tgctcagtta
      781 agtatcttgc tagtgcactt gtatgtgaat tcacttgtgc actgccaata ataattaatc
      841 ctttcatatt tgacccctct tttttattaa acttgttgtt cacgtaataa tttcataata
      901 gctttaccaa caccactatt ttcattagta tctgtgacat atttcgctat ttttttaact
      961 tcttctgcac cattttccat cgcaactgga tagccaactt tctctaacat tgataagtca
     1021 tttaaattgt cacctattgc catgacatct ttcatttcaa tccctaatct ttcggcaatt
     1081 gtttctagcg caataccttt ttgtgcatct gaatgcgtta tttctatatt tcctctcgaa
     1141 gatgatgata tagctaaatt cggagattca gctaaaattt tactagcttt gtcaattttt
     1201 tctaaatttc catcaaatgc taatattttc ataattaatt caccaggtat gttttcaata
     1261 gcatcataat tatcaacaac tttcaacgta ccattatcta tgcgtctttg aataccattt
     1321 ttaatacgct caacgtttgc gtgttgacct gcacgctcag caatatctat gtaaatgtct
     1381 aaatctcttt gtggatcttc agtataaatc gcacgactcg tgtatacttg ataataaata
     1441 cctgcatctt ttaaaacatt tgtaattttg tgtactaacg atttattaag gtgtgaagtg
     1501 ctcattacat tgaaagtttc atcacgtact tcagcaccat tcaaacaaat atatggtact
     1561 gttaaatctg tgtcagcaac tggtgcttgt gcttcataaa atgctcgacc tgtcgcgata
     1621 acaaccgtta tcccttgttc ttgagcgtat ttaatcgcat caatattagg ttgagaaatt
     1681 tcatgtgccg cattaagtag cgtgccatcc atatcagtgg ctattagttt tatcattatg
     1741 ttacctcgtt tcgtaaattt aaaatcttgt tcttaaataa gaatatatac tcagcgcaca
     1801 tacttttcta ttaacattta tattgtcatt aatttatcat ataatgtaat tctaacaaat
     1861 tttaattagt atgtactatc gtctaattgg tggatttctt attggctctt aagtttttaa
     1921 aaaatgttgt taataatgtg ctacatactt ctttaagtac acctttatca acaattgcac
     1981 gatgattaaa attagattgt tgcaataaat tcattaaact gccactacaa ccacctttag
     2041 gatcatctgc gccatagacg actcttggaa tgcgactcat tacaattgtt cctgcgcaca
     2101 tgacacatgg ttctaaggtt acatataatg tgcaaccttc taaacgccaa ctacctaaca
     2161 ctttggctgc acgttcaatt gcaatatgtt cagcatgggc cgttggttgt tgtagtgttt
     2221 ctcttaaatt atgtgctcta gcgataactt catcatcttt agtgatgata gcacctatag
     2281 gtacttcgcc tagttgagct gcttttttag cttcttcaat cgctaatgtc ataaaatata
     2341 tatcatttgt catttatgtc cagatacctc acttatggta caatactcaa tgtctatttt
     2401 aacatttgga gatgtgaata tgaacaaacc ttttatagca attgaaggtc ctattggcgt
     2461 aggtaaatct tcacttgcac acaaattaag tcaaacttta gatttttatg aagaaaaaga
     2521 aatcatcaca gaaaatccat ttttatcaga cttttatgaa gatatctcta aatggagttt
     2581 tcaaactgaa atgttctttt tatgcaatag atataagcaa tttcaagatg taacacaact
     2641 aaatcaaggt gtagttagtg attatcatat acataaaaat aagatatttg ctaaaaatac
     2701 tttgagttct gttgaatttc agaaattcag taaaatttat gatattttaa ctgaagatat
     2761 gattatgccg aatatgatta tctttttaga tgcagacctt gatgtgttaa aatctagaat
     2821 tgctaaacgt aaccgtagtt ttgagcatca aatagaagat gaatatctgt taaagttaaa
     2881 aaaagattat cgtgagtatt atgagtcctt acaaagtaat ggttcaaatg tagttttaat
     2941 cgatacaact tctattgatt ttctaaaaaa tgaacaagat tacgaagata tattacatat
     3001 tatattacct atgataggag atattaccaa tgaataatta cggtattcca caaaatgcca
     3061 ttataaccat tgcaggtaca gttggtgttg gaaaatcaac actaacgcaa gcacttgcag
     3121 ataaattaaa ctttaaaacg tcttttgaaa atgtcgaaca taatccatat ttagataaat
     3181 tttacagcga ttttgaacga tggagtttcc atttgcaaat ttacttctta gctgaacgtt
     3241 ttaaagaaca aaagcgtatg tttgaatatg gtggtggctt tgtccaagat cgatcaattt
     3301 atgaagatgt tgatattttt gcaaaaatgc atgaagaaga aggcacaatg agtaaagaag
     3361 atttcaaaac atattcagac ttatttaatg ccatggtcat gacaccttat tttcctaaac
     3421 ctgatgtaat gatttattta gaatgtaatt atgacgaggt cattgatcgt attattgaac
     3481 gtggtcgcga aatggaaata aatactgatc ctgaatattg gaaaaagtta tttaaacgtt
     3541 atgacgattg gattaacagc tttaatgcat gtccagttgt acgtatcaac attaatgaat
     3601 atgatataca caaagatcct gattctttaa atcctatgat tgataaaatc gctcgtatta
     3661 taaaaacgta tcgacaagta gatacacgat aaaagactaa agacatagtg tatgtgcttt
     3721 aattcaatgt aacttccata gaaatcatcg attattttat caattctatc gaatacatta
     3781 attcacatat acactatgtc tttcttttta atttaaagct tctaaaatat ctgccgcact
     3841 atttaaaata atatcagctt catgtaattc ttcttttgtt gcaatacctg ttaatacacc
     3901 tattgccata cctaaatttg cattacttgc tgtcttcata tcattagcag tgtctcctac
     3961 tatagctact ttctgaggat ctacattata ttgctcaaat aaaggcgata atactttagg
     4021 atttggcttc tcataggcat ccgcttcggt agaaatgatc aaatcgaaca acgaggtagc
     4081 attggtatgt gctaaaaatt gttctacacc ttttttagta tcactcgtaa caatacctag
     4141 ttgatagcct tttgctttca aatcgataag tgcttcttta acaccttcta cccaattaat
     4201 ttcaggaata cgttcatcta ccaacttttg acttgttgac ttggaccagt cggttgtatc
     4261 ttgtcccgtc acatcattaa atgcctgaat aatttgttgt aaagatcctg aacccatcac
     4321 tgattttgga tcaatagatt ctttaatgac accgagttgt cttaaagtag cttctttatt
     4381 atgtactggg aaagtctcaa gcaatgattg tacaaatcgt acccctattt tttcccaact
     4441 tctatcaaat tcaattaacg taccatcttt atcaaataat atccattcca ttaatatcaa
     4501 tactcctatt tatttatttc gtattatgct gattctatga tgttcgttat ttccctgaaa
     4561 tgaactcgta gtattgttct ttttaaatat tgaattaaat ataataataa gtgaaatccc
     4621 cttcaatact taacaataaa cattgtaaac ttaatttatt accatgcttc gctttattga
     4681 aagggatttt agtcatgatt aacttttaca tattgttttc atgatcatat tcaattttta
     4741 ttaatatttt ggtacaacga ctctccaacc atttttatct tctaaagtac cattttgaat
     4801 accagtatag atgtcgtata atttttgagt aatttcacca gtctcattat tattaataac
     4861 gatttcacga tcttcgtatc tcaatgtacc cacaggtgaa ataactgctg cagtaccact
     4921 accaaatact tctgttaact cacctttatc atatgattcg aataattcat cgattgaaac
     4981 gcggcgctct tcgacttcat atcctaagtt tttagctaat tcgataatag atttacgtgt
     5041 aataccaggt aaaatactgc cattcaactc tggtgtaatt actttgccat tttcaacgaa
     5101 gaaaatgttc atgctaccaa cttcttcgat atatttctgt tcaacaccat caagccataa
     5161 tacttggtca taacctaatt tatttgcatt agtttgtgct aataaacttg ccgcatagtt
     5221 acctgcaact ttcgcaaagc ctacaccgcc acgaacagca cgcacatatt catcttctac
     5281 atagatttta gttggtttta aagtttcacc accataatat gcacctgaag gagataaaat
     5341 aattaataat ttatactgat gtgatgcacc aacgccaagt gccccttctg ttgcaaaaac
     5401 aaatggacga atatataatg attgaccttc cccttcagga atccaatctc tctctatatc
     5461 aactaattgt tttagcccct ctaacaattc tgcttcgtct acttgaggca tttctaatcg
     5521 tgctaacgag ttattaagac gcttaaaatt ttcttcagga cggaaaagtg caacttcccc
     5581 atctctttta tatgctttta atccttcgaa taccgattga ccataatgaa caccttgtgc
     5641 agcaggtgaa atttcaatag gaccataagg tactatcttc aaatcatgcc atcctttatc
     5701 tgcatcataa tcataactca acatataatc agtaaaatat ttaccaaaac ctagttgaga
     5761 tgtatttggt ttttgtttta atgtttctcg tcgttcaact ttaactgctt gtgacatggt
     5821 gattgcctcc taataatatt gtataagaat ttgtttaact taaattataa caatccatat
     5881 tttgctgttc aataaatttt ctaaaaattc aaaattaatt aacagatttt ctagaaagac
     5941 tatatctttt agtataaacg tattaatttc acagagacaa gtaatctgtg ttttactaat
     6001 atactttcca tacaaaaaac tctttacttt aaaatgaact aagctcgcga attcaataca
     6061 tataatgaat aatattagaa ttcatgtact agtttattaa aataaagagt aatttaaaat
     6121 atcattccgt gtattaaagt gaatggaaat gattagttat tatttttaac agtatctttt
     6181 tgttcaatag cttctaacat taatttagtc atgctcgcta aatcatattt aggatcaaat
     6241 ccccattcgc cacgtgaaca gcttgtatca atagaatccg gccaactatt agcgatacct
     6301 tgtctaatag gatcaacatc ataatctaat gtaaaatttg gatagtattc ttgaattgct
     6361 tcttttacca tctctggatc aaaactcatt gcgctcaaat tataaccatt tctagtttct
     6421 aatttagcgt cgtctgcttc cataagctta ataattgctt caattgcatc atccatatac
     6481 atcatatcca tatacgtgcc tttatctatg aagcttgtat aatgaccttc tcttactgct
     6541 ttgaagtata tttcaacagc atagtctgta gtaccaccac ctggctcttt aacatgcgag
     6601 attaaacctg ggaatctaac acttcttgta tctacaccaa aacgtttgaa atagtattga
     6661 cacaataatt ctccagctac tttatttaca ccatacattg tcgtaggttg ctgaatcgtt
     6721 acttgtggcg tattaacttt aggagttgag tctccaaatg caccaattga acttggtgtg
     6781 aaaaagtgca aattataagt tcttgcagct tctaatgcat tcattaatcc acccatattt
     6841 aaatcccaag caagaattgg atttttctca gcagttgctg ataataatgc tgccatatgc
     6901 attagactat ccgtttcaaa gtccctaact aactcaaaca tgcggtcacg atctgttacg
     6961 tctaagattt caaatggtcc attttgtaca ggtgagtctg cttcaggttc cctaatatct
     7021 gtagcaagaa cattatctgt cccataaatc tctctgcact taacaactaa ttctgtacca
     7081 atttgtccta atgcaccagt aatcataatt tttttcatag aaatatctcc tttgtctctt
     7141 ctatataacc atagtccatc acaagcggac ataatattca ttttcataat aattataata
     7201 taaaagcgct ttcttgtata tatgacatgt acatgttgct gatatttctg taaatgaaaa
     7261 ttctagctgt attaattgat tttagtaatt tatagcgttg aatattacta attactgtca
     7321 aattaaattt tttatccctc aactcttaac ctttggatat ctttcattat attagctttt
     7381 ttataaccat ggatatcatg taaagcctta taagctttaa ataatgtttc atacctttgt
     7441 actttttccg cttctggatt aatttcgtat aaaattggct ctttcatagc atcaactgcg
     7501 tcattaattg aattatgtgc gccaccactg actgcaccta atattgctgc gcctattgct
     7561 ggtgcatact cactatccat aacaattagt tttttattca gtacattcgc atagatatcc
     7621 atcataacag cattcttttt aggtataccg ccacatgcaa atactttttc tacttccata
     7681 tgccaatctt gatactgttg cataatcatc ttagtaccaa atgctgtagc ttctaaatat
     7741 gctctataaa tatcctcatg cttagtttgt aaagttaatc caaagataca acctgttaaa
     7801 ttgctatcac ttaatacact tcgatttcca ttatgccaat cgagagcaat gagcccactt
     7861 tcacctggca tttgatgttt tatcttttca ttcattaatt caaatacagt catatttcta
     7921 tttgctgctt catctacata tgactttggt gcttgcttag cgacatactc aaacaaatca
     7981 cctactgctg attgtcccgc ttcataagca aataattctg gaatgattgc tccttttact
     8041 gaacctgata tacctggcac ttgatgttgc ttttcattta acataagatg gcatgtgctt
     8101 gttcccatca ccatagtcat ttctttatct ttttcagacc caatacctaa taaactagca
     8161 tgggcatcaa taataaaagg acttaccata gtctcttttg ataatcctaa tttctgtgcc
     8221 attttatcgt ccagtttccc tactgcttca ccaatattaa caaccggtgc agatacttta
     8281 tcttgaatta cttttgataa tttggggtct attttatcaa ataaatcata atgaaaccct
     8341 gtttcttctt cccaaaatgc tttgaaacct aatccacaat tcgagcgtac atttttatta
     8401 gttaatttat ttacaatcca atcgcccgct tccataatat aagccgtttt ttccataatt
     8461 tctggtgccc tattcatgac ctccattatt ttgggaatca tccattcact actaacatta
     8521 tatccataat ggcctaacca cttattatta ttttcaatag cagtttgata taatttctct
     8581 gcttctttat atgcaccatg atgtttccaa agtttcacat acgcatgtgg attgttttta
     8641 aattgtttta aattatgtac cgggttaagg ttttcgtcag taaaaacaat agtagatgaa
     8701 gtaaagtcta taccaatacc tactatattg actggatcta tttttgattc acgtactata
     8761 tatgatattc cttcttccat aatttctaaa taatcattac tattttgaag tgcatatgta
     8821 tgtggtattt ttaaaccatt taattcactc tcaatgacac catgtgtata tggtttcaca
     8881 aattttgata ctacttgacc gttagttgta ttaattaaaa acacacggcc tgaagcagtt
     8941 ccataatcaa ttccaatgct ataagacatc atgtttcctc catatcgcta gttgcggtta
     9001 ttatttttgc aagcgctttc ttaaatcata ctcataatag gttctatttt acaagtatca
     9061 cttaaatttt gccaaaaaaa agagccctca tacatttaca tatgaggctc ctctaattta
     9121 tatttaatta tttattttgt attgcattta acatttcatt aactgctaat tttcctaact
     9181 catttgaagc taaaggactg tcacctgtta ataatttgcg atcttttaac gttcttcctg
     9241 tcatatcgtc gttgactact tttaatcctt gtttagttaa taaatcagca actaaccatt
     9301 tcaagcgtcc aggtaaataa cctatttcaa tatttgcacc ttcatctaat gagtcaggga
     9361 agacacaaac agagtatcct tctaatggag atttttctct gttaagccct gctgaaagta
     9421 gtgctgctgg tccatgacat aatgtaacta taaatcggtc attttctaat gcccaatcta
     9481 atgtttgttg aacgtcttcg ctttcagaaa taccaacaac tgcagcgtgt ccacctggga
     9541 taaagacaga taaatagtct gaatcaggtc ctaattcatt tttaatcaca tcttctaatt
     9601 tttttggctg ttttaatttt tctttcaatt tattataagt gcttataact gcctcgtctt
     9661 cagttggcat agcccataat tctaatttag ctggataacc agataatgtc gcaacatcaa
     9721 cgtcaaaacc tgcttccatt aaatgatgta aaggtaataa catttcaaca ggatgattac
     9781 ccgtagagaa catttttcca ttttccaata atacatatct ctcttcagca gcaatcatca
     9841 atactttcca tttaccatct ttataggcac ctttgtgttc aacaccatca aaatctgttt
     9901 taggtgctgt atattgacta agggaatatg gtgatgggaa aaatgcgtta tcttctgctt
     9961 tatctggcgt tggttgctta cttaattcat ttacatcttg tgacataatt tattcctact
    10021 ttctctatat agttactact agtatagaca tatactacac actataaaca tgtattacca
    10081 ttaaaatgct cattatcaaa aataatcaaa atgaatttct ttgtaaaaat acaactaaat
    10141 tctacaagat gcttttaaaa ttcaaacttt agtggttgat aacactaaac attgttataa
    10201 gaacttactg ttaataaact aaacatttaa aaaaagccca cgacaatatt tgccgtggga
    10261 ataaatatta aatcaacttc atttcttttc ctactttttc ataagccgca attgcttcat
    10321 ctaacatgtc ttttgtatgt gcagctgtag gcatatttct tacacgtcct gtacctcttg
    10381 gtactgttgg aaaaacgata gatttcacat agacaccttc gtcttttaaa cgcttactaa
    10441 attcttgagt tgttttttca tcaccaataa ttactggtgt aattggagtt tctgactcac
    10501 ctgtatcata tcctaatttt gacaatccgt tttttaaata ttgtgcattg tcccataatt
    10561 tatcatgtaa ttcagttgaa gccattaact ttttaactgc ttcagttatt gctttagtat
    10621 ccccaggtgc taatgatgta gagaataaga atggtcgtga ttgtgctttt aaccaatcta
    10681 ttaactcttt tgtacctgct acataaccgc caacgacacc aatcgcttta gaaagcgtac
    10741 ctatttggaa atcgatttta tcttgtaaac caaaatgttt aaccgtacca gcgcctttac
    10801 ccataacacc tgaaccatga gcgtcgtcaa cataagttaa taaaccaaat tcttctgcaa
    10861 tttctacaat ttcaggtaat ttagccacat caccatccat actaaaaacg ccatcagtga
    10921 tatacatcac tttattgtat tgacctgatt caactgcttc ttttgctttc gcacgtaaat
    10981 catccatgtc tgaatggtta actcgaataa ttttagcttt agataagcga catccatcaa
    11041 taattgatgc atgattaagc tcatctgata aaatagcatc atttttattc ataacagccg
    11101 aaatagcagc catattacaa ttaaatcctg attgataagc tattgcagct tctgttcctt
    11161 taaattttgc tagtgtttgt tctaattcgt cgtgtaaatc taatgtacca ttgattgtac
    11221 gaacagcgcc tgcacctaca ccatgtgtat caatagctgc ttttgcagct gatttcaaat
    11281 cttcatttgt tgctagtcct aaataattat ttgaagataa gttaatgtat gatttcccat
    11341 tgattttgat ttctggtccg tttgcacctt caattgtatc tatttcatta tacaaaccat
    11401 tttcttttag ataatttata ttttcctcta aaaactcatg taatgattga accacagtat
    11461 ataatccccc ttaagtattg tttggtaata cctttatcat acagtaattc tacataactt
    11521 gaaagcctta tcattcatag ataaaatatc tcaaagcaat catttagtac gataatttca
    11581 taaaatgtta tactataaac attattttag aaagtagtga taagggtgtt agattggttc
    11641 caactagcaa ataataaaga aaataaaaca attcaactca gacgttattt acaccaatat
    11701 cctgagttat cttttaaaga atttcaaaca catgattata ttgttaacca attaagccag
    11761 ttatcttgtg atattgaaac acctatcggc cgcaatggta tcaaagccac atttaaaggc
    11821 ttgggcacag gacctaccat tgcattaaga gctgactttg atgcgttacc tgtcgaggaa
    11881 ttaaacgatg tgccttataa gtctaaaaat ccaggatgta tgcatgcgtg tgggcatgat
    11941 ggtcatacag caattttact tactgtagca gagattttag atgaacataa acatttatta
    12001 gaaggtaatg ttgtattaat attccagtac ggtgaagaaa tcatgccagg tggttctcaa
    12061 gaaatgatag atgctggatg tctggaaaat gtagatagaa tttacggtac acatttatgg
    12121 agtggttatc ctactggaac tattcattca cgtgctgggg caatcatggc ctctccagat
    12181 gaattcagtg tcacaattaa aggtcgtggc ggtcatggtg ccaaacctca tgaaaccatt
    12241 gacccaatag tgatcatggc agagttcatt ttaagcgcac aaaaaataat ttcacgtaca
    12301 atcgatccag ttaaacaagc tgtactttca tttggaatga ttcaagcagg caccacagat
    12361 agcgttattc ctgatcaagc attttgtaaa ggtacagtta gaactttcga ttcagatata
    12421 cagaatcatg taatggacaa aatggataag ctactacaag gtttagcaat agcaaatgat
    12481 attaactacg atttgaatta tattaaaggg tatttgcctg tccataacaa cgagaaagca
    12541 tatcaagtta ttaaagaagc aacaaatgac atacatgtac gctttaatga atcagattta
    12601 atgatgattg gagaagattt ttcacattat ttgaaagtac gaccaggtgc attctttctg
    12661 actggttgtg gtaatgaaag taaaggtatt acagcgccac accataatcc caaatttgat
    12721 attgatgaaa aatcattaaa atacgctgta gctgtatttt taaaaatcat tgaattagag
    12781 caagtattta aaacaaatta agcatttata ttaattgaaa gacatgaatc tgagacataa
    12841 actaatgaaa tgctcccttc aaagtagaca ttgaaaaaat gaaaactttg agaggagcat
    12901 tttacaatgt ccaaggctca ataattttat ttaaactgta ttatcagtta taagttttat
    12961 tagtcaatct ttcaacaatt attgttcttc taaatcgaat agccatgaca aaatttacac
    13021 attaaaaaaa gacccctcga ttgagggatc ttctttttat ataaaatcta agaaattaga
    13081 aattatttaa tgatttcagt aacaacgcct gatcctacag tacgtccacc ttcacggatt
    13141 gagaaacgag taccgtcttc aatcgcgatt ggagcaatta attctactgt catttcaacg
    13201 ttatcaccag gcattaccat ttcagtacct tctggtaagt gaacaacacc agttacgtca
    13261 gtagtacgga aatagaattg tggacgatag tttgagaaga atggagtgtg acgtccacct
    13321 tcgtcttttg ataatacgta tacttctgct ttgaattcag tatgtggtgt aattgaacca
    13381 ggagcagcta atacttgacc acgttgtacg tcttcacgag caacaccacg taataatgca
    13441 ccaatgttgt caccagcttc agcgtagtct aataatttac ggaacatttc aacacctgta
    13501 acagttgttt tagatgtgtc atgtaaaccg atgatttcaa cttcttcacc aactttgatt
    13561 tgaccacgtt caacacggcc tgtagcaaca gtaccacgac cagtgattga gaatacgtcc
    13621 tcaactggca tcatgaatgg tttgtcagaa tcacgttctg gagttggaat gtaagtatct
    13681 acagcttcca ttaattctaa tattttttct tcgtattgag catcgccttc taaagctttt
    13741 aatgctgaac cagcgattac aggtacatcg tcacctggga agtcatattc gcttaataag
    13801 tcacgaactt ccatttctac taattctaat agttcttcat cgtcaaccat gtcaactttg
    13861 tttaagaata ctactaatgc tggtacacca acgttacgtg ataaaagaat gtgttcacga
    13921 gtttgtggca ttggaccgtc agcagcagat actactaaga taccgccgtc catttgagca
    13981 gcaccagtga tcatgttttt aacgtagtca gcgtgtcctg ggcagtcaac gtgagcgtag
    14041 tgacgtttgt cagtttggta ctcaatgtga gaagtattga ttgtgatacc acgttctttt
    14101 tcttctggag cgttgtcaat catgtcatat gattgtgcaa ctgagtcacc attttttgct
    14161 aatacagtag cgattgctgc tgttaatgtt gttttaccat ggtcaacgtg accgatagta
    14221 cc
//
LOCUS       DALMNS010000079        14181 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.079, whole genome shotgun sequence.
ACCESSION   DALMNS010000079 DALMNS010000000
VERSION     DALMNS010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 14181)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14181)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14181
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.079"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            46..213
                     /locus_tag="O6Y56_001936"
     CDS             46..213
                     /locus_tag="O6Y56_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575185.1"
                     /translation="MRYVISIIMGIVLAIWSFKQLSQSHLDSGFIFFFIVYVLCISYF
                     NSDKHDKNKKR"
     gene            complement(290..838)
                     /gene="farR"
                     /locus_tag="O6Y56_001937"
     CDS             complement(290..838)
                     /gene="farR"
                     /locus_tag="O6Y56_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid efflux pump transcriptional regulator
                     FarR"
                     /protein_id="HDB5575186.1"
                     /translation="MKETDLRVIKTKKALSSSLLQLLEQHLFQTITVNQICHNALVHR
                     TTFYKHFYDKYDLLEYLFNQLTKAYFATDISDRLNHPFQTINDTINNKEDLQKVADFQ
                     QEDAEFNKVLKNVCIKIMNDDIKNNSDRIDVDGDIPNNLLFYIYGSLIEGFMHWIKDE
                     KIDWPSEEIDKIFHKVINIKIK"
     gene            982..3471
                     /gene="farE"
                     /locus_tag="O6Y56_001938"
     CDS             982..3471
                     /gene="farE"
                     /locus_tag="O6Y56_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001051413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid efflux MMPL transporter FarE"
                     /protein_id="HDB5575187.1"
                     /translation="MAKFLYKMGTFIAKHKWSTLIAWVIIVAAIFIPIATNAPKFDND
                     IKMTGLKSLDTNEKIEKHFNQDSEKAQIRVVFKTTKDDGIVQPSITKDIKKTLDDIKK
                     DDKHIDKVSDPYENKQISKDKTTAFADITYNVSQTSLKDGSRDNIKSHLKDLRDNHNV
                     QTELTGTGMTSTEVGGNSELVGIIVAFVVLLITFGSVIAAGLPIISALIGLASGVGII
                     SLLTYVFDIPNVTLTLAVMIGLAVGIDYALFILFRYRQVMKTETDYVKGIGLAVGTAG
                     SAVIFAGVTVVIAVCGLSLVGIDFLAVMGFASAISVIFAVFSALTLLPALISIFHKRI
                     KVNKLQSNFKKDIDTPWSKFITGNALAAVLLGLIILVAAAIPVSHMRLGIPDDGVKPA
                     DSTQKKAYDIISDKFGEGFNGQIPMLINVKDKKDDPQGLQQDLQSVYKDIKDKKNVDI
                     VTPPQMSKDNDYALMVVIPKQGPNAESTNDLVHDLRDYHKDAQDKYGFKTEISGQSVI
                     NIDMSKKLNEAIPLFATVIVVLAFFLLMIVFRSILIPLKAVLGFVLSLMATLGFTTFV
                     MQDGFMKGLFGIETTGPMLAFLPVITIGILFGLAMDYEVFLMSRIHEEYSKTGDNDYS
                     IKVGLKESGPVIVAAALIMFSVFFAFVFQEDVMIKSMGMALAFGVLFDAFVVRMMLIP
                     ALTKLFGKGSWYLPAWLNRIIPRVDIEGHALEKYKTVESQESESKDSKETYDTTFKVY
                     PQGATNVSKHQDVHGQDDARSIVLDDKTMALYQEVKQQSASSLFLYDALMDYQNKHQL
                     NSKQQTTNIEQLNKNIEKLNQLLEKNLRNKS"
     gene            3687..3914
                     /locus_tag="O6Y56_001939"
     CDS             3687..3914
                     /locus_tag="O6Y56_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HDB5575188.1"
                     /translation="MLNIKNGEMNKAYKIKRMDIANENMLYRLSAFGLTDDAIITIKQ
                     KCLFKGPCIIEVNGQQLSIRHCDACSIALEE"
     gene            3926..5920
                     /gene="feoB"
                     /locus_tag="O6Y56_001940"
     CDS             3926..5920
                     /gene="feoB"
                     /locus_tag="O6Y56_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HDB5575189.1"
                     /translation="MENYCILGNPNVGKTSLFNALTGSYEYIGNWSGVTVEKKVGKLK
                     ENVGQLIDLPGTYDLSPISKDETVVTDYLLNDSFSGIINIVDASQLKRNMQLTVQLLE
                     LNKPIYIGLNMIDVATKRGIKIDYHKLMKKLKTPIFPVVARTGKGTKHLLGEIKHLGE
                     GYQPHFKINYGEKIEETIKNMCQIIMTETSHDKYQARFIAIQFLLNNMQIANELNSEV
                     VNKLSSFRDQVAEQVEAVSVRREMERIRNHYIETLLQDVVTYPDEDKQYFSSRIDKIL
                     THKYIGMPIFLAIMWLIFQTTFTWIGTPLSDQLDAFIGGTFTDSVKTIMNYLGVIPFL
                     QDLITDGIIAGVGSVLVFVPQIVVLFFFISLLEDSGYMARIAVLMDRIMESFGLSGKS
                     FIPMIIGFGCNVPSIMAARSIENEKERLTTILIAPFMSCSARLPVYALFVGIFFKENQ
                     SLVVLSLYVLGIIMAFLVSTVLTKTVLKNDNAIFIVELPTYRVPSIKTLWRSTWEKAK
                     GFVRKAGTFIFGGSVVIWLLSYVGPHGINVNINQSFLHMVGSFFGMLVQPLGFGTWQA
                     GATLVPGFLAKEVIVSSMAIIYSSSDAGLVNVIQNQFTPLSAYAFMIFILLYIPCVST
                     VAAIRKETYSWKWTALAVAYPLVTAYVLTFIFYQVGHLFV"
     gene            5933..6103
                     /locus_tag="O6Y56_001941"
     CDS             5933..6103
                     /locus_tag="O6Y56_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FeoB-associated Cys-rich membrane protein"
                     /protein_id="HDB5575190.1"
                     /translation="MSVIINILIFLAIFGYALYTLVKFFKRSKQGKCGTCDIDRDCCG
                     TEQHTANHFPGK"
     gene            complement(6171..8279)
                     /gene="clpL"
                     /locus_tag="O6Y56_001942"
     CDS             complement(6171..8279)
                     /gene="clpL"
                     /locus_tag="O6Y56_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001058986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpL"
                     /protein_id="HDB5575191.1"
                     /translation="MNNNFFNSDFDSILRRMMQDMQNSNQTSNKKYYINGKEVSPEEL
                     AQFTQQGGNHSAEQSAQAFQQAALRQQGQQSGNGNYLEQIGRNLTQEARDGLLDPVIG
                     RDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISI
                     DISSLEAGTQYRGAFEENIQKLVEGVKSSQNAVLFFDEIHQIIGSGATGSDSGSKGLS
                     DILKPALSRGEISIIGATTQDEYRNNIMKDAALTRRFNEVLVNEPSAKDTVEILKGIR
                     EKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHLSAQSPAIDKVA
                     TEKRISELEHDKRKAVSAEEYKKADDIQNEIKSLQDILENSNGEHTAVATVHDISDTI
                     QRLTGIPVSQMDANDIERLKNISSRLRSKIIGQDKAVEMVSRAIRRNRAGFDDGNRPI
                     GSFLFVGPTGVGKTELAKQLAIDLFGNKEALIRLDMSEYSDTTAVSKMIGTTAGYVGY
                     DDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTI
                     IICTSNAGFGNGTDQEYDDIMQEMKKFFRPEFLNRFNGIVEFLHLDKESLQEIINLLL
                     DDVQVTLDKKGITMNVSQDAKDWLIEEGYDEDLGARPLRRIVEQQVRDKITDYYLDHT
                     DVKHVDLDIEDNELVVKGKS"
     gene            8642..9163
                     /locus_tag="O6Y56_001943"
     CDS             8642..9163
                     /locus_tag="O6Y56_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDB5575192.1"
                     /translation="MVYKSYYDSPVGRLELVSDGISLTAVLFENQQDDSTREENTSLA
                     IFKEATQWLDAYFKGDNPEITIPVKPTGSHFQQCVWNELRQIPYGTLTTYGAIAKKVG
                     KVLDKPKMSAQAVGGAVGSNPLSIIVPCHRVVGKTGSLTGFGGTINNKIKLLELENID
                     MSKLYVPKHSTKP"
     gene            9364..10029
                     /gene="sey"
                     /locus_tag="O6Y56_001944"
     CDS             9364..10029
                     /gene="sey"
                     /locus_tag="O6Y56_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000644941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal enterotoxin type Y"
                     /protein_id="HDB5575193.1"
                     /translation="MKAKLWFLLTTLAFLIAVTGSIGIAEVKAKTTGLITENSNDSLK
                     EHYAQKFEVYTNKEVTGVGENYIDTKVDTYNVRTVLYNTDYLKQFKNQDKVNIWGTLY
                     ENQQSKVYRGTVVKYDPISKVTNLSYRMNLFVNGHQTKVNPDSLLEVKNKQISLKETD
                     FRIRKYLLEKEHLYSNYNSGELIIEMKNGARHKIDLGDILSDSQEKTFDFDNISHIDI
                     YMK"
     gene            complement(10258..11424)
                     /locus_tag="O6Y56_001945"
     CDS             complement(10258..11424)
                     /locus_tag="O6Y56_001945"
                     /EC_number="2.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase"
                     /protein_id="HDB5575194.1"
                     /translation="MTIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAV
                     SPVNQDIVSMGANAAKDIITDEDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFA
                     RCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYGLNSGGEPTQGAGAVAM
                     VIAHNPSILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAK
                     RQGKSLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNI
                     YTGSLYLSLISLLENRDLQAGETIGLFSYGSGSVGEFYSATLVEGYKDHLDQAAHKAL
                     LNNRTEVSVDAYETFFKRFDDVDFDEEQDAVHEDRHIFYLSNIENNVREYHRPE"
     gene            11679..12959
                     /locus_tag="O6Y56_001946"
     CDS             11679..12959
                     /locus_tag="O6Y56_001946"
                     /EC_number="1.1.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001191006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase,
                     degradative"
                     /protein_id="HDB5575195.1"
                     /translation="MQSLDKNFRHLSRQQKLQQLVDKQWLSEEQFNILLNHPLIDEEV
                     ANSLIENVIAQGALPVGLLPNIIVDDKAYVVPMMVEEPSVVAAASYGAKLVNQTGGFK
                     TVSSERIMIGQIVFDGVDDTEKLSADIKALEKQIHKIADEAYPSIKARGGGYQRIAID
                     TFPEQQLLSLKVFVDTKDAMGANMLNTILEAITAFLKNEFPQSDILMSILSNHATASV
                     VKVQGEIDVKDLARGERTGEEVAKRMERASVLAQVDIHRAATHNKGVMNGIHAVVLAT
                     GNDTRGAEASAHAYASRDGQYRGIATWRYDQKRQRLIGTIEVPMTLAIVGGGTKVLPI
                     AKASLELLNVDSAQELGHVVAAVGLAQNFAACRALVSEGIQQGHMSLQYKSLAIVVGA
                     KGDEIAQVAEALKQEPRANTQVAERILQDLRSQQ"
     gene            complement(13099..13530)
                     /locus_tag="O6Y56_001947"
     CDS             complement(13099..13530)
                     /locus_tag="O6Y56_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDB5575196.1"
                     /translation="MEYKKILIRLLIAFAVLFSADFTYQSVEQTHQSHAAVNYYSKNQ
                     CTWWAFKRRAQVGKPVSNRWGNAKNWYYNARKSKYATGRTPRKFAVMQSTAGYYGHVA
                     VVEQVYKNGSIKVSEYNFYRPLKYNTRVLSKKAARNFNYIY"
     gene            complement(13921..14139)
                     /locus_tag="O6Y56_001948"
     CDS             complement(13921..14139)
                     /locus_tag="O6Y56_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sterile alpha motif-like domain-containing
                     protein"
                     /protein_id="HDB5575197.1"
                     /translation="MSFYEFMQNFLGDDTPLGELVDWINQDSNFPREVKSHSEILSYF
                     RTNPCPESISVPVIKRALSVFNQFTNVQ"
BASE COUNT         4712 a         2167 c         2640 g         4662 t
ORIGIN      
        1 gtaatagcaa ccatattttt agaaaaggat tataggtata agaatgtgag atacgttatt
       61 tcaataataa tgggaattgt attagcaatt tggtcattta aacaactgag tcaaagtcat
      121 ttagatagcg gatttatttt tttcttcata gtttatgtgt tgtgtatcag ttattttaat
      181 agcgataagc acgataaaaa taaaaaacga tagtagtaca cgaattcatt aacgtgtaca
      241 ctatcgtttt tattatgaat gttggtaacg cttatgagcc tctaatctac tatttaatct
      301 taatatttat taccttatgg aaaattttat caatttcctc gctaggccag tcaatttttt
      361 catcttttat ccaatgcata aaaccttcaa tcaacgaacc gtatatataa aataataaat
      421 tattaggaat atctccatcg acatcaattc tgtcgctatt gtttttgatg tcgtcattca
      481 taattttaat gcaaacattt tttaaaactt tattaaactc tgcatcttct tgttggaagt
      541 ctgctacttt ttgtaagtct tctttattat taattgtatc gttaatcgtt tggaatgggt
      601 ggttaaggcg atcactaata tcagtcgcaa aatatgcttt ggtcaattga ttgaacaaat
      661 attcaagtaa gtcatattta tcataaaaat gtttataaaa tgttgtacgg tgtacgagcg
      721 cgttatgaca tatttggttg acggtaattg tttggaacag atgttgttct aacaattgaa
      781 gcaaacttga agacaatgct ttctttgtct taatcactct taaatcggtc tctttcatct
      841 acatttctcc ttaatatgta gtttaaaata cagaattcaa aaattagttc tttaagatgc
      901 atggtataga tactataatc gaacaataat ctacactgta tagttaaact ataacgttga
      961 ttttaaaggg aggcaatata tttggcgaaa tttttataca agatgggtac atttatcgca
     1021 aagcataagt ggtccacatt aatcgcatgg gtaataattg tagctgcaat atttatacca
     1081 attgctacaa atgcaccgaa atttgacaat gatattaaaa tgactggatt aaagtcatta
     1141 gacacgaatg aaaagattga aaagcatttt aatcaagata gtgaaaaggc acaaattcgt
     1201 gtggtcttta agacgactaa agatgatggt attgtgcaac cgagtatcac taaagatatt
     1261 aagaaaacgt tagatgatat taaaaaagat gacaagcaca ttgataaagt atcagatcca
     1321 tacgaaaata agcaaattag taaagataaa acaactgcat ttgcagatat cacatacaat
     1381 gttagtcaaa catctttaaa agatggctct agagataata ttaaaagtca tttaaaagat
     1441 ttgcgtgaca atcataatgt acagactgaa ttaacaggaa caggtatgac atctacagaa
     1501 gtaggtggta attctgaact agttggtatc atagttgcat ttgtagtgtt attgattaca
     1561 tttggttcag tcattgctgc aggattacca attataagtg cattgattgg tctagcatct
     1621 ggggttggca ttattagcct attgacctat gtctttgata tacctaatgt tacattaact
     1681 ttagcggtaa tgattgggct cgctgttggt atcgattatg cattatttat tttgtttaga
     1741 tatcgacaag taatgaaaac tgaaacagac tatgttaaag gtatcggact tgcagtggga
     1801 acagcaggta gcgcagtcat cttcgctggt gtgacagttg tgattgccgt atgtggttta
     1861 tcgctagttg gcatagattt cttagcagtg atggggtttg cttcggcaat tagtgttata
     1921 tttgctgtat tcagtgcact gactttatta cctgcgttaa ttagcatttt ccataaacgc
     1981 attaaagtga acaaattgca gtctaatttt aaaaaagata ttgatacgcc gtggtctaaa
     2041 tttattactg gtaatgcact tgcagcagta ttattaggtt taattatatt agttgcagcg
     2101 gctattccag ttagtcatat gcgtctaggc attccggatg atggcgtaaa gccagcagat
     2161 tctactcaga aaaaggcata cgatattatt tcagataagt ttggcgaagg atttaatggc
     2221 caaataccga tgctgattaa cgttaaagat aaaaaagatg atccacaagg attacaacaa
     2281 gatttacaat ctgtgtataa agatattaaa gataagaaaa atgtagatat tgttacgccg
     2341 ccacaaatga gtaaagataa tgattacgct ttgatggtcg tgatacctaa gcaagggcct
     2401 aatgcagaga gtacaaacga tttagtgcat gatttacgag attatcataa agatgcacaa
     2461 gataaatatg ggttcaaaac ggagatttca ggacaaagtg tcattaatat tgatatgtct
     2521 aaaaagttaa atgaggcgat acctttattt gcaacagtaa ttgttgtatt ggcatttttc
     2581 ttattaatga ttgtctttcg ttcaattcta ataccgttaa aagcagtttt aggattcgtc
     2641 ttgtcattaa tggcaacact aggttttaca acctttgtaa tgcaagatgg ctttatgaaa
     2701 ggattattcg gcatagaaac gacaggacca atgctagcct tcttgccggt tattacaatt
     2761 ggtatactat tcggcttagc aatggattac gaagtcttcc ttatgtcgcg aattcatgaa
     2821 gaatatagta aaacagggga taatgattat tctatcaaag taggattgaa agaaagtggt
     2881 cctgttattg tagcagctgc attaatcatg tttagtgtct tctttgcgtt tgtattccaa
     2941 gaagatgtca tgattaaatc aatgggtatg gcattagctt ttggtgtact ctttgatgcc
     3001 ttcgtagtca gaatgatgtt aattcctgca ttaactaaat tgtttggaaa aggttcgtgg
     3061 tatttaccag catggttgaa tcgcattatt ccacgagttg atattgaagg acatgcactt
     3121 gaaaaatata aaacggttga atcacaggaa tctgaatcta aagatagtaa ggaaacatac
     3181 gacacaacct ttaaagtata tccacaaggt gcaacaaatg tatcgaaaca tcaagatgta
     3241 catgggcaag atgatgcacg ttcaatagta ctagatgata aaacgatggc attgtaccaa
     3301 gaagtgaaac agcaatcagc aagttcattg tttttatatg atgctttaat ggattatcaa
     3361 aacaagcatc aactaaattc aaaacaacaa acaacgaata tagaacagtt gaataaaaat
     3421 attgaaaagc tcaatcaatt gttagaaaaa aacttaagaa ataaatcata aaataacatg
     3481 tacatgcctc cgctttaaat gtctatcaat gacatttgaa gcggaggtgt tttgcatgga
     3541 agcgattata caaaatattt ttgcaatgtc acaaatttta catgaaaaat gaaaattatt
     3601 taaataaagt attgcgagct ataattttaa aggttatgat ttttaagtga taatgattat
     3661 tatttctaat aggagagcga aatagtatgt taaacattaa aaatggtgaa atgaataagg
     3721 cttataaaat aaagcgaatg gatattgcta atgagaatat gttgtatcgt ctaagtgcct
     3781 ttgggttaac agatgacgct atcataacga ttaaacaaaa atgtttattt aaagggccat
     3841 gtattattga agtaaacgga caacagttaa gtattagaca ttgcgatgct tgttctattg
     3901 cattagaaga ataggagccg gacgaatgga aaattattgt attttaggaa atcctaatgt
     3961 tggtaaaaca tctttgttta acgctttaac tggttcgtat gaatatatag gcaactggag
     4021 tggcgtaacg gtagagaaaa aagtagggaa gcttaaagaa aatgtaggac aattaattga
     4081 tttaccaggt acatatgatt tatcgccgat ttctaaagat gaaactgtag tgacagacta
     4141 tttattaaac gattcatttt caggaatcat taacattgtt gatgcgagtc aactaaaaag
     4201 aaatatgcaa ttaacagtac aattgttaga acttaataaa ccaatataca tcggattaaa
     4261 tatgattgat gtagctacaa agcgcgggat aaaaatcgat tatcataaat tgatgaaaaa
     4321 gttaaaaaca cctatttttc cagttgtggc acgtacaggc aaaggaacta aacatttact
     4381 tggcgaaata aagcatctag gggaagggta tcaaccgcat tttaaaatca attatggtga
     4441 gaagattgaa gagacaatta aaaatatgtg tcaaataata atgacagaga catctcatga
     4501 taagtatcaa gctaggttta ttgcgattca attcttatta aataacatgc aaattgcaaa
     4561 cgaacttaat tcagaggttg taaataaatt gtcgagtttt cgtgatcaag ttgccgaaca
     4621 agtagaagct gtatctgttc gtcgagagat ggagcgtata cgcaatcatt atattgagac
     4681 gttattgcaa gacgtggtaa cgtatccaga tgaagataag caatatttca gctctagaat
     4741 tgacaagata ttaacacata aatatatagg gatgccgatc tttctagcga ttatgtggtt
     4801 aatctttcaa actacattta catggattgg cacacctttg tcggatcaac tcgatgcatt
     4861 tataggtggt acatttacgg atagtgtgaa gacgattatg aattatcttg gcgttatacc
     4921 atttttacaa gatttaatta cagatggcat tattgctggt gtaggatcag tattagtctt
     4981 tgtaccacaa attgttgtgc tctttttctt tatatcttta ttagaagatt caggttatat
     5041 ggcacgtatt gcggttttaa tggatcgtat tatggaatcg ttcggtttaa gcgggaagtc
     5101 ttttataccg atgattatcg gatttggttg taacgtaccg agtattatgg ctgcgcgcag
     5161 tattgaaaat gaaaaagagc gtttaacaac gatattaatt gcaccattca tgtcatgctc
     5221 tgctagactg ccagtgtatg cattgttcgt aggtatcttt ttcaaagaga atcaatcttt
     5281 agtagtatta agcctgtatg ttttaggtat tattatggca tttttagtca gtacagtact
     5341 tactaagacg gttttaaaaa atgataatgc aatctttatt gtggaattgc caacataccg
     5401 tgtgccttcc attaaaacgt tgtggcgtag tacttgggaa aaggctaagg gctttgttcg
     5461 taaagcaggt acatttattt ttggcggctc agtagtcatt tggctattaa gttatgtagg
     5521 gccacatggt atcaatgtga atatcaatca aagtttttta catatggttg gtagcttctt
     5581 tggtatgtta gtgcaaccgc tcggatttgg aacatggcaa gcaggtgcta cgttagtgcc
     5641 aggattttta gcaaaagaag ttatcgtaag ttcgatggcg attatctatt catcaagtga
     5701 tgcaggcctt gtcaatgtga ttcaaaatca atttacaccg ctatctgcgt atgcatttat
     5761 gatatttata ctattgtata ttccttgtgt ttctacagtg gcagcaatcc gtaaagagac
     5821 ttattcatgg aaatggacgg cacttgcagt tgcctatcct ctagtcactg catatgtctt
     5881 aacattcatt ttttatcaag tcggacattt atttgtttaa ggagtggtta aagtgtcagt
     5941 tattattaac attttaattt ttttagcaat tttcggatat gccttgtata cgttagttaa
     6001 atttttcaaa cgttcgaaac aagggaaatg tggcacatgt gacattgatc gtgattgttg
     6061 tggaacagaa caacacacag cgaatcattt tcctgggaaa taatttaaaa aatgagcaca
     6121 ggcgagggcg tcctgatgct catttttttg atacactata tgttaaagta tcatgattta
     6181 cctttgacga ctaactcatt gtcttcgata tctaaatcca catgtttaac gtctgtatga
     6241 tctaaataat aatctgttat tttgtcacgc acttgttgtt caacaatacg tcttaatggg
     6301 cgtgcgccta agtcttcatc ataaccttct tcaattaacc aatcttttgc atcttgagag
     6361 acattcatcg taataccttt tttatctaat gttacttgga catcatccaa caataaatta
     6421 atgatttctt gtagtgactc tttatctagg tgtaagaatt ctacaatacc attgaagcgg
     6481 ttaaggaatt caggacggaa gaattttttc atttcttgca taatgtcatc gtattcttgg
     6541 tctgtaccgt taccaaaacc agcgtttgac gtacaaataa tgattgtgtt tttaaagttg
     6601 atgacgttac cttgaccatc tgttaaatta ccatcatcca tcacttggag taataatgtt
     6661 aatatttgtg gattagcctt ttcaatttca tcaaatagaa tgactgaata tggattgcgt
     6721 cgtacttttt cagttaatgt atttgaatta tcgtcataac cgacatagcc agcagttgta
     6781 ccaatcattt tagaaacagc agtagtatca ctatattcac tcatatcaag tcgaatcagt
     6841 gcctctttat taccaaataa atcaatggct aactgtttgg caagctctgt tttaccaaca
     6901 ccagtaggac cgacaaatag gaagctacca attggacgat tgccatcatc aaaaccagct
     6961 cgattacgac gaatggcacg agaaaccatt tctacagctt tatcttgacc aatgatttta
     7021 cttcttaaac gactagaaat attttttaaa cgttcaatgt cattggcatc catttgagat
     7081 acaggaatac cagttaatcg ttgaatggta tcagaaatat catgcaccgt tgctactgca
     7141 gtatgttcac cattactgtt ttctaatata tcttgtagag atttgatttc attttgaatg
     7201 tcatctgctt ttttatattc ttcagcactt acagctttac gcttatcatg ttccaattca
     7261 gaaatacgtt tttcagtcgc gactttatca atagcagggc tttgtgcaga taaatgtgca
     7321 gctgtaatat ctaatacatc gattgctttg tcaggtaata agcgttgtgg aatatattga
     7381 atggataagt ctacacatgc ctttaatacg tcatcaggta atttgacttg atggtgtgtt
     7441 tcaaattttt cgcgaattcc ttttaaaatt tcaaccgtat cttttgcgct tggttcgtta
     7501 accagcacct cgttaaaacg acgtgttaat gcagcgtctt tcatgatatt gtttcgatat
     7561 tcatcttgag tcgttgcacc tataattgaa atttcaccac gacttaatgc tggttttaaa
     7621 atatcagata accctttact accggaatca cttcctgttg cgccggaacc gatgatttgg
     7681 tgaatttcgt caaagaagag cacagcattt tgtgatgact taacgccttc aactaacttt
     7741 tggatgtttt cttcaaaggc gccacgatat tgcgttccag cttcaagcga tgaaatatct
     7801 atagatataa tttctttatc tttgattgct gcaggtacgt tcccttcaac gattgcttgc
     7861 gctaaacctt cgacaatcgc agttttacca actccagctt ctccgactag gataggattg
     7921 tttttagtgc gtctacttaa gacttctgca gtttcttgga tttctttatc acgaccgatg
     7981 actggatcta ataatccgtc acgagcctct tgcgttaagt tacgaccaat ttgttctaaa
     8041 taattgccat tgccactttg ttgaccttgt tgtcttagtg ctgcttgttg aaaagcttgc
     8101 gcactttgtt cggcagaatg attaccacct tgttgcgtaa attgtgctaa ttcttccggt
     8161 gaaacttctt taccattaat atagtatttc ttgttactag tctgatttga gttttgcatg
     8221 tcttgcatca ttcttcgtaa aatagaatcg aagtcactat tgaaaaaatt gttattcata
     8281 aacatcacct ctaaattttt aaactaataa gtaaaagaaa atacattgaa actatatgca
     8341 aaatataaac aatggcaatt ctatttttcc accattgtag ttttgaaaac ggcgcattgt
     8401 aggcacttta tgaacttttt gtgtaatttt tgaagtaagt aagaatttaa aagtaaatat
     8461 taatcaatgg ttaagaaacg tatgtgttga tacatagtta attaagaaat ggtatattgt
     8521 gttggtagtc tatgtgaatt ttgatttgga agtgaatagt tgatcttgat aaagcataaa
     8581 gtgttaatca ttttcataaa gttaaatgaa tagtatgatg atgcaaaagg agtgtgtgtt
     8641 tatggtatat aagagttact atgattcgcc tgtaggacga ttggaacttg tgagtgatgg
     8701 gataagtctg accgctgttt tgtttgaaaa tcaacaagat gatagtacta gggaagaaaa
     8761 tacgtcttta gcgatattta aagaggcgac acagtggtta gacgcgtatt ttaaaggtga
     8821 caatcctgaa atcacaatac ctgtaaagcc aacaggtagt cattttcaac agtgtgtttg
     8881 gaatgaatta agacagattc cttatgggac gttaacaacg tatggtgcta ttgccaaaaa
     8941 agtaggcaag gtgcttgata agccaaaaat gtcagcacaa gcggttggag gtgcagtcgg
     9001 aagcaatcca ttatcaatta tcgtgccatg tcatcgcgtt gttggtaaaa cgggtagctt
     9061 aacaggattc ggtggaacga ttaataataa aattaagctg ttagagttgg agaatatcga
     9121 tatgtcaaag ctttatgtac caaaacatag cacgaagccg taacgtataa atatgttaga
     9181 aaaataaatc tatgcattgt taaatacgtt aaattatttt aaaaactaat caaactaaat
     9241 taatgataat tttagaaaat taacatctag aaatattgat atatagatca ttcggtaata
     9301 acattaaatt gcgcgcaaag catttgatgc atttaatctt aaatgagaaa ggatgatctg
     9361 aaaatgaaag cgaaactatg gtttttattg acaactttgg catttttgat tgcagtaacg
     9421 ggatctattg gaatagcaga agtaaaagca aaaacaactg gattgattac agaaaatagt
     9481 aatgacagtt taaaagagca ttatgcacaa aaatttgaag tttatacgaa taaagaagta
     9541 acaggagttg gggaaaatta tatagacacg aaagttgaca cctacaatgt acggacagtg
     9601 ctctacaaca ctgattattt gaaacagttt aaaaatcaag acaaagttaa tatatgggga
     9661 acattatatg aaaaccaaca atctaaagta tatcgtggca cagtagttaa gtatgatcct
     9721 atatcaaaag taactaactt atcttataga atgaacttgt ttgttaacgg tcatcaaact
     9781 aaagtgaatc cagacagttt attagaagtt aagaataaac agatttctct aaaagaaaca
     9841 gattttagaa ttagaaaata tttattagaa aaagaacacc tatatagtaa ttacaattca
     9901 ggggaactaa ttatagaaat gaaaaatgga gcaagacata aaatagattt aggcgacata
     9961 ttgagtgact cacaagaaaa aacgtttgat tttgataata ttagtcatat agatatttat
    10021 atgaaatagg tcgttccaac ataaaatgcg tctagggtac tttgactttg acaatttaaa
    10081 atagaatagc ttaggaaatt aagttcttag aaaaacttca ataatgtgtc aaatagacat
    10141 aatgaattca ttcaagacga agcattatga atagaaaaca gcagtaagac gatttcaatg
    10201 agaagctgtc ttactgctgt ttttaggtta tatttaaatg tctttcaaat acacagatta
    10261 ctctggtctg tgatattcgc gaacgttatt ttcaatattt gataagtaga aaatatgacg
    10321 atcttcatga acagcatctt gttcttcgtc aaagtctacg tcatcaaaac gtttgaagaa
    10381 tgtttcatat gcatcaacag atacttcagt acggttattt aataatgctt tgtgcgcagc
    10441 ctgatctaaa tgatctttgt agccttcaac taatgtcgca ctataaaatt caccaactga
    10501 acctgagcca taactgaata aaccgattgt ttcaccagct tgtaaatcac gattttcaag
    10561 taatgatatt aggcttaaat ataatgatcc agtataaata ttaccgacat aacggttata
    10621 atctacagca tcttcatatc ctgaacgtaa acgctcttga gttgtttcgt cagcgttatc
    10681 aatgattgac tctaatgcct ttttacccat ttttgtaaat ggaacatgga agcatagtga
    10741 tgcgaagtca gcgagcgact taccttgacg ttttgcgtat tcattccagc tttgttggaa
    10801 tgagcggata taagcatctt tagataatgc accatcaact aatggatatt tatgtccagt
    10861 tggacgccag aaatcataaa cgtcttcagt gtaagcaaca gcatcttcat ttaatgccaa
    10921 aatgcttgga ttatgtgcaa taaccatcgc aactgcgcca gcaccttgtg ttggctcgcc
    10981 gcctgaattc aatccataac gtgctgtatc tgtagcaata actaatactt tttcattcgg
    11041 tctagttgct aaataatctt tagctaattg aattgctggt gttgcagcat aacaagcttc
    11101 tttcatttca aagcaacgtg caaaaggttg aatacctaat aagttgtgaa tttgaacagc
    11161 ggctgcttta gcagcatcaa ctgctgattc agttgccaca attaccatac caattttctt
    11221 tttatcttcg tctgttataa tgtccttagc agcgttagcg cccattgaaa cgatgtcttg
    11281 atttacagga ctaacagcca tttcagtttg accaattcca attaaaaatt tgtttgggtc
    11341 tacttggcgt gcttctgcta atttagccat gtctacatag tactttggaa cgtaaaagtt
    11401 tattttgtcg atacctattg tcataaggtt ttacatcctt tcaaatttat aaaagcaaca
    11461 cttgtatcat atcagaatat gctaatttta tacaaagaaa tatactaaat ttaaaaatga
    11521 tttgtcgttt cttgtaagcg ttttaattta ccttatttta ttttaaagtc aaaacgacaa
    11581 ttattcaatt gaattttaag acgaataacg ttattttatg gtaaaaatag tagtgattga
    11641 aatgttaaaa aattatgtga agtaaaagga gtatgtccat gcaaagttta gataagaatt
    11701 tccgacattt atctcgtcaa caaaagttac aacaattggt agataagcaa tggttatcag
    11761 aagagcaatt caacatttta ttgaatcatc cattaattga tgaggaagta gcaaatagtt
    11821 taattgaaaa tgtcatcgcg caaggtgcat tacccgttgg attattaccg aatatcattg
    11881 tggacgataa ggcatatgtt gtacctatga tggtggaaga gccttcagtt gtcgctgcag
    11941 ctagttatgg tgcaaagcta gtgaatcaga ctggcggatt taaaacggta tcttctgaac
    12001 gtattatgat aggtcaaatc gtctttgatg gcgttgacga tactgaaaaa ttatcagcag
    12061 acattaaagc tttagaaaag caaattcata aaattgctga tgaggcatat ccttctatta
    12121 aagcgcgtgg tggtggttac caacgtatag ctattgatac atttcctgag caacagttac
    12181 tatctttaaa agtatttgtt gatacgaaag atgccatggg cgctaatatg cttaatacga
    12241 ttttagaggc cataactgca tttttaaaaa atgaatttcc gcaaagcgac attttaatga
    12301 gtattttatc caatcatgca acagcgtccg ttgttaaagt tcaaggcgaa attgacgtta
    12361 aagatttagc aaggggcgag agaactggag aagaggttgc caaacgaatg gaacgtgctt
    12421 ctgtattggc acaagttgat attcatcgtg ctgcaacaca taataaaggt gttatgaatg
    12481 gcatacatgc cgttgtttta gcaacaggaa atgatacgcg tggtgcagaa gcaagtgcgc
    12541 atgcatacgc aagtagagat ggacaatatc gtggtattgc aacatggaga tacgatcaaa
    12601 aacgtcaacg tttaattggt acaatagagg tgcctatgac attggcaatc gttggcggtg
    12661 gtacaaaagt attaccaatt gctaaagctt ctttagaatt gctaaatgta gattcagcac
    12721 aagaattagg tcatgtagtt gctgccgttg gtttagcgca aaactttgca gcatgtcgcg
    12781 cgctcgtttc cgaaggtatc cagcaaggcc atatgagctt gcaatataaa tctttagcta
    12841 ttgttgtagg tgcaaaaggt gatgaaattg cgcaagtagc tgaagcattg aagcaagaac
    12901 cccgtgcgaa tacacaagta gctgaacgca ttttacaaga tttaagaagc caacaataat
    12961 caaatgcgaa tagcgatttt taaagaaaag tttaagtcag tccatcgtag cgcttagata
    13021 aattaatatg aacaaaaaat aaaaacttct atcacacgca tacaggaatt tgaagcgttc
    13081 gtgatagaag ttttttgatt agtaaatata gttaaagtta cgtgctgcct ttttgcttag
    13141 tacacgtgta ttgtatttta atgggcgata aaagttgtat tctgaaactt taatactacc
    13201 gtttttatat acttgttcaa caactgcgac atgtccataa tatcctgcag ttgattgcat
    13261 gacagcaaat tttcttggtg tacgaccagt cgcatatttt gatttacgtg cattgtaata
    13321 ccaattttta gcattgcccc atctattaga aacaggttta ccgacttgtg cgcgacgttt
    13381 aaatgcccac catgtacatt ggtttttact ataataatta actgcggcat gcgattgatg
    13441 cgtttgttcg acggattgat aagtgaaatc tgctgagaaa agtactgcaa aagcaattaa
    13501 taaacgaatt agtatctttt tatattccat ttttatctcc caagttaatt tttttcttta
    13561 ttcaacgtta tttatgataa caaaattttt ttagaaaaca atgcaagcaa tcaacaataa
    13621 aagtaactgt aatgaagctg tcatataaag tgttaaattg taataaaaat ggattttttc
    13681 ataaaatgta gaaattcatg tatctaacaa ttaagtgtca tagtgataca aggatgtcag
    13741 gattgattaa cagcggatat tagtgggaaa atataaaatg atttaaaaga aaagatacgt
    13801 ggttctataa ctgaaagaaa atagcaatca caacataata aatgaagcga taacattaaa
    13861 aatagcgccc ctgcaatcag agcgctaaca tgagatgatg tgactccatg tattcatgta
    13921 tcattgtaca tttgtgaatt ggttgaaaac tgatagtgcc cgtttaatta caggtactga
    13981 gatgctttca ggacatggat ttgttcgaaa atatgacaat atttcactat ggctcttcac
    14041 ttctctaggg aaattgctat cttgattaat ccaatcaacc aattcaccta atggtgtgtc
    14101 atcaccaaga aaattttgca taaattcgta aaagctcaat acctcacctc gattaatata
    14161 cttgagccat tattataata a
//
LOCUS       DALMNS010000080        13491 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.080, whole genome shotgun sequence.
ACCESSION   DALMNS010000080 DALMNS010000000
VERSION     DALMNS010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 13491)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13491)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13491
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.080"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            606..1619
                     /locus_tag="O6Y56_001949"
     CDS             606..1619
                     /locus_tag="O6Y56_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HDB5575198.1"
                     /translation="MKDLLQAQQKLIPDLIDKMYKRFSILTTISKNQPVGRRSLSEHM
                     DMTERVLRSETDMLKKQDLIKVKPTGMEITAEGEQLISQLKGYFDIYADDNRLSEGIK
                     NKFQIKEVHVVPGDADNSQSVKTELGRQAGQLLEGILQEDAIVAVTGGSTMACVSEAI
                     HLLPYNVFFVPARGGLGENVVFQANTIAASMAQQAGGYYTTMYVPDNVSETTYNTLLL
                     EPSVINTLDKIKQANVILHGIGDALKMAHRRQSPEKVIEQLQHHQAVGEAFGYYFDTQ
                     GQIVHKVKTIGLQLEDLESKDFIFAVAGGKSKGEAIKAYLTIAPKNTVLITDEAAAKI
                     ILE"
     gene            1672..2682
                     /gene="gap"
                     /locus_tag="O6Y56_001950"
     CDS             1672..2682
                     /gene="gap"
                     /locus_tag="O6Y56_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDB5575199.1"
                     /translation="MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHL
                     LKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTD
                     KDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVA
                     KVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIG
                     KVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESFGYTED
                     EIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAEL
                     SK"
     gene            2821..4011
                     /locus_tag="O6Y56_001951"
     CDS             2821..4011
                     /locus_tag="O6Y56_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDB5575200.1"
                     /translation="MAKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTI
                     QYIIEQGGKIVLFSHLGKVKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEA
                     AIKDLKEGDVLLVENTRYEDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHAS
                     NVGISTHLETAAGFLMDKEIKFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIAD
                     KIIIGGGMAYTFLKAQGKEIGISLLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSN
                     DAKITVVPSDSIPADQEGMDIGPNTVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTI
                     GVCKAIANLKDAITIIGGGDSAAAAISLGFENDFTHISTGGGASLEYLEGKELPGIKA
                     INNK"
     gene            4133..4894
                     /locus_tag="O6Y56_001952"
     CDS             4133..4894
                     /locus_tag="O6Y56_001952"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDB5575201.1"
                     /translation="MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAI
                     QLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRE
                     LFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEEQ
                     LKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTISDLSSKEVSEATRIQYGGSVKP
                     NNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK"
     gene            4897..6414
                     /locus_tag="O6Y56_001953"
     CDS             4897..6414
                     /locus_tag="O6Y56_001953"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HDB5575202.1"
                     /translation="MAKKPTALIILDGFANRESEHGNAIKLANKPNFDRYYNKYPTTQ
                     IEASGLDVGLPEGQMGNSEVGHMNIGAGRIVYQSLTRINKSIEDGDFFENDVLNNAIA
                     HVNSHDSALHIFGLLSDGGVHSHYKHLFALLELAKKQGVEKVYVHAFLDGRDVDQKSA
                     LKYIEETEAKFNELGIGQFASVSGRYYAMDRDKRWEREEKAYNAIRNFDAPTYATAKE
                     GVEASYNEGLTDEFVVPFIVENQNDGVNDGDAVIFYNFRPDRAAQLSEIFANRAFEGF
                     KVEQVKDLFYATFTKYNDNIDAAIVFEKVDLNNTIGEIAQNNNLTQLRIAETEKYPHV
                     TYFMSGGRNEEFKGERRRLIDSPKVATYDLKPEMSAYEVKDALLEELNKGDLDLIILN
                     FANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD
                     QPMTTHTTNPVPVIVTKEGVTLRETGRLGDLAPTLLDLLNVEQPEDMTGESLIKH"
     gene            6544..7848
                     /gene="eno"
                     /locus_tag="O6Y56_001954"
     CDS             6544..7848
                     /gene="eno"
                     /locus_tag="O6Y56_001954"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017466665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDB5575203.1"
                     /translation="MPIITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTG
                     EHEAVELRDGDKSRYLGKGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIALDGT
                     PNKGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQLPVPMMNIVNGGSHSDA
                     PIAFQEFMILPVGATTFKESLRWGTEIFHNLKSILSKRGLETAVGDEGGFAPKFEGTE
                     DAVETIIQAIEAAGYKPGEEVFLGFDCASSEFYENGVYDYSKFEGEHGAKRTAAEQVD
                     YLEQLVDKYPIITIEDGMDENDWDGWKQLTERIGDRVQLVGDDLFVTNTEILAKGIEN
                     GIGNSILIKVNQIGTLTETFDAIEMAQKAGYTAVVSHRSGETEDTTIADIAVATNAGQ
                     IKTGSLSRTDRIAKYNQLLRIEDELFETAKYDGIKSFYNLDK"
     gene            8187..8645
                     /locus_tag="O6Y56_001955"
     CDS             8187..8645
                     /locus_tag="O6Y56_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575204.1"
                     /translation="MADRTNKEIKTGRFIATASIVFSILLIIHYFVSLDNATAKALLN
                     LTNQNTSDKAIDYILNSFRFTGIMYILAYLAGFITFWNRHTYVWWFMFAVYVSNSLFT
                     LINLSITIQAIKAAHGAYLTLPILIVIIGSVALAIYMLVVSIKRKSTFNR"
     gene            8712..8945
                     /gene="secG"
                     /locus_tag="O6Y56_001956"
     CDS             8712..8945
                     /gene="secG"
                     /locus_tag="O6Y56_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499357.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDB5575205.1"
                     /translation="MHTFLIVLLIIDCIALITVVLLQEGKSSGLSGAISGGAEQLFGK
                     QKQRGVDLFLNRLTIILSILFFVLMICISYLGM"
     gene            9074..9814
                     /locus_tag="O6Y56_001957"
     CDS             9074..9814
                     /locus_tag="O6Y56_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase"
                     /protein_id="HDB5575206.1"
                     /translation="MQIKLPKPFFFEEGKRAVLLLHGFTGNSSDVRQLGRFLQKKGYT
                     SYAPQYEGHAAPPEEILQSSPFVWFKDALDGYDYLVEQGYDEIVVAGLSLGGDFALKL
                     SLNRDVKGIVTMCSPMGGKTEGAIYEGFLEYARNFKKYEGKDQEAIDNEMHHFKPTET
                     LKELSEALDTIKDQVDEVFDPILVIQAENDNMIDPQSANYIYEHVDSDEKDIKWYSQS
                     GHVITIDKEKEQVFDDIYQFLESLDWSE"
     gene            9848..12220
                     /gene="rnr"
                     /locus_tag="O6Y56_001958"
     CDS             9848..12220
                     /gene="rnr"
                     /locus_tag="O6Y56_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HDB5575207.1"
                     /translation="MNLKQSIEEIINQPEYEPMSVSDFQDALGLSSADSFRDLIKVLV
                     ELEQSGLIERSKTDRYQKKHSSKGQSKLIKGTLSQNKKGFAFLRPEDKDMEDIFIPPT
                     KINRALDGDTVIVEIHQSKGEHKGKIEGEVKSIEKHSVTQVVGTYSQARHFGFVIPDD
                     KRIMQDIFIPKGQSLGAVDGHKVLVQITKYADGSDNPEGHISAILGHKNDPGVDILSI
                     IYQHGIEIEFPDEVLQEAEATPDNIEDSEIKGRHDLRDELTITIDGADAKDLDDAISV
                     KKLANGNTQLTVSIADVSYYVTEGSALDKEAYDRATSVYLVDRVIPMIPHRLSNGICS
                     LNPNVDRLTLSCRMEIDDSGRVVKHEIFDSVIHSDYRMTYYAVNQIITEKDPTIREQY
                     NEITPMLDLAQDLSNRLIQMRKRRGEIDFDISEAKVLVNEDGIPTDVQLRQRGEGERL
                     IESFMLIANETVAEHFSKLDVPFIYRVHEQPKSDRLRQFFDFITNFGIMIKGTGEDIH
                     PTTLQKVQEEVEGRPEQMVISTMMLRSMQQAHYDDVNLGHFGLSAEYYTHFTSPIRRY
                     PDLTVHRLIRKYLIEKSMDNKEVKRWEDKLPELAEHTSKRERRAIEAERDTDELKKAE
                     YMIQHIGDEFEGIVSSVANFGMFIELPNTIEGMVHIANMTDDYYRFEERQMALIGERQ
                     AKVFRIGDTVKVKVTHVDVDERLIDFQIVGMPLPKNDRSQRPARGKTIQAKTRGKSLD
                     KSKSDDKGHKKKGKQRKGKNERKNDKSGNSKHKPFYKDKSVKKKARRKKK"
     gene            12242..12706
                     /gene="smpB"
                     /locus_tag="O6Y56_001959"
     CDS             12242..12706
                     /gene="smpB"
                     /locus_tag="O6Y56_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDB5575208.1"
                     /translation="MAKKKSPGTLAENRKARHDYNIEDTIEAGIVLQGTEIKSIRRGS
                     ANLKDSYAQVKNGEMYLNNMHIAPYEEGNRFNHDPLRSRKLLLHKREIIKLGDQTREI
                     GYSIVPLKLYLKHGHCKVLLGVARGKKKYDKRQALKEKAVKRDVARDMKARY"
     gene            12797..13158
                     /gene="ssrA"
                     /locus_tag="O6Y56_001960"
     tmRNA           12797..13158
                     /gene="ssrA"
                     /locus_tag="O6Y56_001960"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
BASE COUNT         4690 a         2036 c         2698 g         4067 t
ORIGIN      
        1 ttgggaatcc aatttcacta tgttggggcc catccccaac ttgcacatta ttgtaagctg
       61 acttttcgtc agcttctgtg ttggggccca ccccaacctc cattgtcggt agaaattggg
      121 aatccaattt ctctatgttg gggcccctga ctttaattgg aaaaagcttg ttacaagcgc
      181 aattttgttc agtcaactac tgccaatgta actttccaga ttttagagtg taaatgccaa
      241 tataaaattg tacatgttta aacaatcaaa agtgtacatt attaaattat catttccatc
      301 tagagcattg atttatgtcc tagtctcaaa taataagcaa atgattagcg agtcagtata
      361 agggtataca tttgactaca gcgaataaaa taaaacgttt tgttgtataa caaatcgaaa
      421 atatattgca agcgctttat caaattattt agaaaattta agttttatgc ttgcaatttt
      481 tgaaatagaa tagtactatt gcaagtgtaa agaggttaat ttttgtccca cgcgggactt
      541 aaaaaggcaa ccactggttg tgatatatcc ttatttacat ttataaatat aaggaggagg
      601 tagtagtgaa agacttattg caagcacagc aaaagcttat accggatctc atagataaaa
      661 tgtataaacg tttttctatt cttactacta tctcaaaaaa tcagcctgtc ggacgtcgaa
      721 gtttaagcga acatatggat atgactgaac gtgtactgcg ttctgaaaca gatatgctta
      781 agaaacaaga tttgataaaa gttaagccta ccggaatgga aattacagct gaaggtgagc
      841 aactgatttc gcaattgaaa ggttactttg atatctatgc agatgacaat cgtctgtcag
      901 aaggtattaa gaataaattt caaattaagg aagttcatgt tgttcctggt gatgctgata
      961 atagtcaatc tgttaaaaca gaattaggta gacaagcagg tcaattactt gaaggcatat
     1021 tacaagaaga tgcgatagtt gctgtaactg gcggatccac gatggcatgt gttagtgaag
     1081 caattcattt attaccatat aatgtattct tcgtaccagc cagaggtgga ctaggcgaaa
     1141 atgttgtctt tcaggcaaac acaattgcag ccagtatggc acaacaagct ggcggttatt
     1201 atacgacgat gtatgtacct gataatgtca gcgaaacaac atataacaca ttgttgttag
     1261 agccatcagt cataaacact ttagacaaaa ttaaacaagc aaacgttata ttacacggca
     1321 ttggtgatgc gctgaagatg gcgcatcgac gtcaatcacc tgaaaaggtc attgaacaac
     1381 ttcaacatca tcaagctgtc ggagaggcat ttggttatta ttttgataca caaggtcaaa
     1441 ttgtccataa ggttaaaaca attggacttc aattagaaga ccttgaatca aaagacttta
     1501 tttttgcagt tgcaggaggc aaatcgaaag gtgaagcaat taaagcatac ttgacgattg
     1561 cacccaagaa tacagtgtta atcactgatg aagccgcagc aaagataata cttgaataag
     1621 agataaaaag tttaatactt tttaaatatc attttaaagg aggccattat aatggcagta
     1681 aaagtagcaa ttaatggttt tggtagaatt ggtcgtttag cattcagaag aattcaagaa
     1741 gtagaaggtc ttgaagttgt agcagtaaac gacttaacag atgacgacat gttagcgcat
     1801 ttattaaaat atgacactat gcaaggtcgt ttcacaggtg aagtagaggt agttgatggt
     1861 ggtttccgcg taaatggtaa agaagttaaa tcattcagtg aaccagatgc aagcaaatta
     1921 ccttggaaag acttaaatat cgatgtagta ttagaatgta ctggtttcta cactgataaa
     1981 gataaagcac aagctcatat tgaagcaggc gctaaaaaag tattaatctc agcaccagct
     2041 actggtgact taaaaacaat cgtattcaac actaaccacc aagagttaga tggttctgaa
     2101 acagttgttt caggtgcttc atgtactaca aactcattag caccagttgc taaagtttta
     2161 aacgatgact ttggtttagt tgaaggttta atgactacaa ttcacgctta cacaggtgat
     2221 caaaatacac aagacgcacc tcacagaaaa ggtgacaaac gtcgtgctcg tgcagcagca
     2281 gaaaacatca tccctaactc aacaggtgct gctaaagcta tcggtaaagt tattcctgaa
     2341 atcgatggta aattagatgg tggtgcacaa cgtgttcctg tagctacagg ttcattaact
     2401 gaattaacag tagtattaga aaaacaagac gtaacagttg aacaagttaa cgaagctatg
     2461 aaaaatgctt caaacgaatc attcggttac actgaagacg aaatcgtttc ttcagacgtt
     2521 gtaggtatga cttacggttc attattcgac gctacacaaa ctcgtgtaat gtcagttggc
     2581 gaccgtcaat tagttaaagt tgcagcttgg tatgataacg aaatgtcata tactgcacaa
     2641 ttagttcgta cattagcata cttagctgaa ctttctaaat aattttagta tagtttttat
     2701 tcaaatacgc tagtgctcag aactatttag cattaattaa agcttatgag taagcgggga
     2761 gcacaaacgc ttctccgctt atttttatat aaaatttcct aattacaagg aggaaacacc
     2821 atggctaaaa aaattgtttc tgatttagat cttaaaggta aaacagtcct agtacgtgct
     2881 gattttaacg tacctttaaa agacggtgaa attactaatg acaaccgtat cgttcaagct
     2941 ttacctacaa ttcaatacat catcgaacaa ggtggtaaaa tcgtactatt ttcacattta
     3001 ggtaaagtaa aagaagaaag tgataaagca aaattaactt tacgtccagt tgctgaagac
     3061 ttatctaaga aattagataa agaagttgtt ttcgtaccgg aaacacgcgg cgaaaaactt
     3121 gaagcagcta ttaaagacct taaagaaggc gacgtattat tagttgaaaa tacacgttat
     3181 gaagatttag acggtaaaaa agaatctaaa aatgatccag aattaggtaa atactgggca
     3241 tctttaggtg atgtgtttgt aaatgatgct tttggtactg cgcatcgtga gcatgcatct
     3301 aatgttggta tttctacaca tttagaaact gcagctggat tcttaatgga taaagaaatt
     3361 aagtttatcg gtggcgtagt taacgatcca cataaaccag ttgttgctat tttaggtgga
     3421 gcaaaagtat ctgacaaaat taatgtcatc aaaaacttag ttaacatagc tgataaaatt
     3481 atcatcggcg gaggtatggc ttatactttc ttaaaagcgc aaggtaaaga aattggtatt
     3541 tcattattag aagaagataa aatcgacttc gcaaaagatt tattagaaaa acatggtgat
     3601 aaaattgtat taccagtaga cactaaagtt gctaaagaat tttctaatga tgccaaaatt
     3661 actgtagtac catctgattc aattccagca gaccaagaag gtatggatat tggaccaaac
     3721 actgtaaaat tatttgcaga tgaattagaa ggtgcgcaca ctgttgtatg gaatggacct
     3781 atgggtgtat tcgagttcag taactttgca caaggtacaa ttggtgtatg caaagcaatt
     3841 gcaaacctta aagatgcaat tacgattatc ggtggcggtg attcagctgc agcagcaatc
     3901 tctttaggtt ttgaaaatga tttcactcat atttcaactg gtggcggagc gtcattagag
     3961 tacctagaag gtaaagaatt gcctggtatc aaagcaatca ataataaata ataaagtgat
     4021 agtttaaagt gatgtggcat gtttgtttaa cattgttacg ggaaaacagt cacaagatga
     4081 catcgtgttt catcactttt caaaaatatt tacaaaacaa ggagtgtctt taatgagaac
     4141 accaattata gctggtaact ggaaaatgaa caaaacagta caagaagcaa aagacttcgt
     4201 caatgcattg ccaacattac cagattcaaa agaagtagaa tcagtaattt gtgcaccagc
     4261 aattcaatta gatgcattaa ctactgcagt taaagaagga aaagcacaag gtttagaaat
     4321 cggtgctcaa aatacgtatt tcgaagataa cggtgcgttc acaggtgaaa cgtctccagt
     4381 tgcattagca gatttaggcg ttaaatacgt tgttatcggt cattctgaac gtcgtgaatt
     4441 attccacgaa acagatgaag aaattaacaa aaaagcgcat gctattttca aacatggtat
     4501 gacaccaatt atttgtgttg gtgaaacaga cgaagaacgt gaaagtggta aagctaacga
     4561 tgttgtaggt gagcaagtta agaaagctgt tgcaggttta tctgaagagc aacttaaatc
     4621 agttgtaatt gcttatgaac caatctgggc aatcggaact ggtaaatcat caacatctga
     4681 agatgcgaat gaaatgtgtg catttgtacg tcaaactatt tctgacttat caagcaaaga
     4741 agtatcagaa gcaactcgta ttcaatatgg tggtagtgtt aaacctaaca acattaaaga
     4801 atacatggca caaactgata ttgatggggc attagtaggt ggcgcatcac ttaaagttga
     4861 agatttcgta caattgttag aaggtgcaaa ataatcatgg ctaagaaacc aactgcgtta
     4921 attattttag atggttttgc gaaccgcgaa agcgaacatg gtaatgcgat aaaattagca
     4981 aacaagccta attttgatcg ttattacaac aaatatccaa cgactcaaat cgaagcgagt
     5041 ggcttagatg ttggactacc tgaaggacaa atgggtaact cagaagttgg tcatatgaat
     5101 atcggtgcag gacgtatcgt ttatcaaagt ttaactcgaa tcaataaatc aattgaagac
     5161 ggtgatttct ttgaaaatga tgttttaaat aatgcaattg cacacgtgaa ttcacatgat
     5221 tcagcgttac acatctttgg tttattgtct gacggtggtg tacacagtca ttacaaacat
     5281 ttatttgctt tgttagaact tgctaaaaaa caaggtgttg aaaaagttta cgtacacgca
     5341 tttttagatg gtcgtgacgt agatcaaaaa tccgctttga aatacatcga agagactgaa
     5401 gctaaattca atgaattagg tattggtcaa tttgcatctg tgtctggccg ttattatgca
     5461 atggaccgtg acaaacgttg ggaacgtgaa gaaaaagctt acaatgctat tcgtaacttt
     5521 gatgccccaa cttatgcgac tgccaaagaa ggtgtggaag caagttataa tgagggctta
     5581 actgacgaat tcgtagtacc attcatcgtt gagaatcaaa atgacggtgt taatgatgga
     5641 gatgcagtga tcttctataa tttccgacct gatagagcag cacaattatc ggaaattttt
     5701 gcgaacagag cattcgaagg ctttaaagtt gaacaagtta aagatttatt ctatgcaaca
     5761 ttcactaagt ataatgacaa tatcgatgcg gctatcgttt tcgaaaaagt tgatttaaat
     5821 aatacaattg gtgaaattgc acaaaataac aatctaactc aattacgtat tgcagaaact
     5881 gaaaaatatc ctcacgttac ttactttatg agtggtggac gtaatgagga atttaaaggt
     5941 gaacgtcgtc gtttgattga ttcacctaaa gttgcaacgt atgacttgaa accagaaatg
     6001 agtgcttatg aagttaaaga tgcattatta gaagagttaa ataaaggtga cttggactta
     6061 attattttaa actttgctaa ccctgatatg gttggacata gtggtatgct tgagccgaca
     6121 atcaaagcaa ttgaagcggt tgatgaatgt ttaggcgaag tggttgataa gattttagac
     6181 atggacggtt atgcaattat tactgctgac catggtaact ctgatcaagt attgacggat
     6241 gatgatcaac caatgactac gcatacaacg aacccagtac cagtgattgt aacaaaagaa
     6301 ggcgttacac ttagagaaac tggtcgctta ggtgacttag cacctacatt attagattta
     6361 ttaaatgtag aacaacctga agacatgaca ggtgaatctt taattaaaca ctaatattgt
     6421 aaaagatgtt aagtaaacgc ttaatgacac ttattttttg aaaataatag taatatcatt
     6481 ttgttaaatg aaagaataaa gctataataa ttatagaata actatttaaa ggagattata
     6541 aacatgccaa ttattacaga tgtttacgct cgcgaagtct tagactctcg tggtaaccca
     6601 actgttgaag tagaagtatt aactgaaagt ggcgcatttg gtcgtgcatt agtaccatca
     6661 ggtgcttcaa ctggtgaaca cgaagctgtt gaattacgtg atggagacaa atcacgttat
     6721 ttaggtaaag gtgttactaa agcagttgaa aacgttaatg aaatcatcgc accagaaatt
     6781 attgaaggtg aattttcagt attagatcaa gtatctattg ataaaatgat gatcgcatta
     6841 gacggtactc caaacaaagg taaattaggt gcaaatgcta ttttaggtgt atcaatcgca
     6901 gtagcacgtg cagcagctga cttattaggt caaccacttt acaaatattt aggtggattt
     6961 aatggtaagc agttaccagt accaatgatg aacatcgtta atggtggttc tcactcagat
     7021 gctccaattg cattccaaga attcatgatt ttacctgtag gtgctacaac gttcaaagaa
     7081 tcattacgtt ggggtactga aattttccac aacttaaaat caattttaag caaacgtggt
     7141 ttagaaactg cagtagggga cgaaggtggt ttcgctccta aatttgaagg tactgaagat
     7201 gctgttgaaa caattatcca agcaatcgaa gcagctggtt acaaaccagg tgaagaagta
     7261 ttcttaggat ttgactgtgc atcatcagaa ttctatgaaa atggtgtata tgactacagt
     7321 aagttcgaag gcgaacacgg tgcaaaacgt acagctgcag aacaagttga ctacttagaa
     7381 caattagtag acaaatatcc tatcattact attgaagacg gtatggacga aaacgactgg
     7441 gatggttgga aacaacttac agaacgtatc ggtgaccgtg tacaattagt aggtgacgat
     7501 ttattcgtaa caaacactga aattttagca aaaggtattg aaaacggaat tggtaactct
     7561 atcttaatta aagttaacca aatcggtaca ttaactgaaa cattcgatgc aatcgaaatg
     7621 gctcaaaaag ctggttacac agcagtagtt tctcaccgtt caggtgaaac agaagataca
     7681 acaattgctg atatcgctgt tgctacaaac gctggtcaaa ttaaaactgg ttcattatca
     7741 cgtactgacc gtattgctaa atacaatcaa ttattacgta tcgaagatga attatttgaa
     7801 actgctaaat atgacggtat caaatcattc tataacttag ataaataatc attttaaaca
     7861 ttaagtactg ccataatttt agttgaggat tattatgtcg gtataaattg aataaagttt
     7921 ttgagttcac gcttaaaaag ttcacgcttg tatttataac ctgccacaga gttgagactg
     7981 tggtaggttt tttgttttga agtattattc gtaacagact aataatcatg aggtaactaa
     8041 taacacatat ttaacttgta ttcttaaact ggtataataa atttatgttg aaatgaatat
     8101 tgtatgacag ggtattcact tttattaaaa ggtaaaatta aataaaggtt ttatagaacg
     8161 tatttaaata tatgaggagt aaacaaatgg ctgatagaac gaataaagaa attaaaacag
     8221 gacgctttat tgcaactgca tcaatcgtat tctcaatatt gttgattatt cattactttg
     8281 tttcgttgga taatgcgact gccaaagcat tactcaattt aacgaatcaa aacacttcag
     8341 ataaagcgat agattacatt ttaaacagct ttagattcac tggtattatg tatattttgg
     8401 cttatctagc aggcttcatc actttttgga atcgacatac ttatgtgtgg tggtttatgt
     8461 ttgcagttta tgtatcaaat agtttgttta cgttgattaa tttatcaatc acaattcaag
     8521 caataaaagc tgcacacggt gcgtacttaa cgttgccaat tttaattgtt attataggtt
     8581 cggttgcatt agcgatttat atgcttgttg tttctatcaa acgtaaaagt acatttaatc
     8641 gctagaaaat tgattttaac aataaaaata tgatatacta cttgtcgtat ataaggaacg
     8701 gaggacaatt tatgcataca tttttaatcg tattattaat cattgattgt attgcattaa
     8761 taactgttgt actactccaa gaaggtaaaa gcagtgggct ttcaggtgcc atcagtggtg
     8821 gtgctgagca gttattcggt aaacaaaaac aacgtggcgt cgatttattc ttaaatagat
     8881 taacaattat tttatcaata ttattttttg tacttatgat ttgcataagt tatcttggta
     8941 tgtaaggtcc ggcgatgtaa atgtcgggct tttttattta taattagaat aataaaggac
     9001 tcatgttcaa ttattagaaa catattgttt aattaagtac gtttgttaat tgtgaaaaag
     9061 gagcgttaga tttatgcaaa taaagttacc aaagcctttc ttttttgagg aaggtaaacg
     9121 tgccgtgtta ttactacatg gttttacagg caattcgtcc gatgttcgtc aattaggtcg
     9181 atttttacaa aagaaaggtt atacatcgta tgcaccgcaa tatgaaggcc atgcagcacc
     9241 accagaagag atacttcaat caagtccttt tgtttggttt aaagatgcct tagatggcta
     9301 tgactacctt gttgaacaag gttatgatga aatcgttgtt gctggcttgt cattaggtgg
     9361 cgattttgca ttaaaattaa gcttaaatcg agatgtaaag ggtattgtaa cgatgtgttc
     9421 tcctatgggt ggcaaaactg aaggtgccat ttatgaaggc tttttagaat atgcacgcaa
     9481 ttttaaaaag tatgaaggta aagatcaaga agcgattgat aacgaaatgc atcatttcaa
     9541 accaactgaa actttaaaag aattaagtga agcattagat acgattaaag atcaagttga
     9601 tgaggttttt gacccaattt tagtgattca agcagaaaac gacaatatga ttgatccaca
     9661 atccgcaaat tatatatatg aacatgtaga ctctgacgaa aaagatatca aatggtatag
     9721 tcagtcagga catgttatta caattgataa agaaaaagaa caagttttcg atgatattta
     9781 tcaattttta gagtcattag actggtcaga ataaaaagag attttaacat tagaaaggag
     9841 gggcataatg aatttaaagc aatcaataga agagattatt aatcaacctg aatatgaacc
     9901 tatgtcagtt tcagattttc aagatgcatt aggtttaagc agtgccgact catttagaga
     9961 tttaattaag gtgcttgtgg aattagaaca atcaggatta atcgaacgtt cgaaaacaga
    10021 tagataccaa aaaaagcata gttctaaagg tcaatcgaaa ttaattaaag gaacattaag
    10081 tcaaaacaag aaaggttttg ctttcctaag acctgaagac aaagatatgg aagatatatt
    10141 tattccccca acaaaaatta atcgtgcctt ggatggagat actgttattg tagaaatcca
    10201 tcaatcaaaa ggtgagcata aaggtaaaat tgaaggggaa gttaagtcaa ttgagaagca
    10261 ttcagtaact caagtggttg gtacgtatag tcaggctaga cattttggtt ttgtcattcc
    10321 agatgataaa cgaattatgc aagatatttt cattcctaaa ggacaaagct taggtgcagt
    10381 agatggtcac aaagtattag ttcaaattac taagtatgct gacggttcag ataatccaga
    10441 aggacatatt tctgctattt taggacataa aaatgatcct ggcgtagata ttttatctat
    10501 tatctatcaa catggcatag aaattgaatt tcctgatgaa gtgttacaag aagctgaagc
    10561 aacaccagac aatatagaag atagtgaaat taaaggacgt catgatttac gtgatgaatt
    10621 gaccatcact attgatggcg cggatgccaa agacttagat gacgcaatta gtgttaaaaa
    10681 gttagcgaac ggtaatacgc aattaactgt aagtattgct gatgtcagct attatgtaac
    10741 agaaggttct gcattggata aagaggctta tgatagagct acaagtgtat atcttgttga
    10801 ccgtgtaatt ccaatgattc cacatcgatt aagtaatggt atttgttcat taaatcctaa
    10861 tgttgatcgt ttaactttaa gctgtcgcat ggaaatcgat gatagtggtc gcgttgtaaa
    10921 acatgaaatc tttgatagtg tgattcattc tgattatcga atgacgtatt atgcggtaaa
    10981 tcagattatt actgaaaagg atcctacgat tcgagagcag tataatgaaa ttacgcctat
    11041 gctagattta gcacaagatt tatcaaatcg tttaattcaa atgagaaaac gccgtggtga
    11101 aattgatttt gatattagcg aagcgaaagt gctagttaac gaagatggta tacctacaga
    11161 tgttcaattg agacaacgtg gtgaaggcga acgtcttatt gagtcattta tgttaattgc
    11221 aaatgaaaca gttgctgaac attttagtaa gttagatgta ccatttattt accgagtgca
    11281 tgagcaacct aaatcagatc gcttaagaca attctttgat tttattacaa actttggcat
    11341 catgattaag ggtactggcg aagatattca tccaacaaca cttcaaaagg ttcaagaaga
    11401 agtagaaggt cgacctgaac aaatggtcat ttcaacaatg atgttacgtt caatgcaaca
    11461 agcgcattat gatgatgtga acttgggaca ttttggctta tcagctgaat attatacgca
    11521 ttttacatca ccaattagac gttatcctga tttaacagtt catcgtttaa tccgtaagta
    11581 tttaattgag aaatcaatgg ataacaaaga agtgaagcgt tgggaagaca aattgcctga
    11641 gttagctgaa catacttcta aacgtgaacg tcgtgctatt gaggcagaac gtgacactga
    11701 tgaattgaaa aaagcagaat atatgattca acatattggt gatgaatttg aaggtattgt
    11761 cagctcagta gctaacttcg gtatgttcat tgaattgcca aatacgatag aaggtatggt
    11821 tcatattgcg aatatgactg atgattatta ccgttttgaa gagcgtcaaa tggcattaat
    11881 tggtgagcgt caagctaaag tatttagaat tggtgacaca gttaaggtta aagtgacgca
    11941 tgttgatgta gatgaacgat taattgattt tcaaattgta ggtatgcctt taccgaaaaa
    12001 tgatcgatca cagcgcccag cgcgaggtaa gacaattcaa gctaaaacgc gtggtaaatc
    12061 attagataaa tcgaaatctg atgataaagg tcataagaaa aaaggtaagc aacgtaaagg
    12121 taaaaatgaa cgtaaaaatg acaaatcagg aaacagtaaa cataagccat tttataaaga
    12181 taaaagtgtg aaaaagaaag cacgtcgtaa gaaaaaataa gcagcaatga ggtgagtatg
    12241 aatggctaag aagaaatcac caggtacatt agcggaaaat cgtaaagcta gacatgatta
    12301 taatattgaa gacacgattg aagcgggaat tgtgttgcaa ggcacagaaa taaaatcaat
    12361 tcgccgaggt agtgctaacc ttaaagatag ttatgcgcaa gttaaaaacg gtgaaatgta
    12421 tttgaataat atgcatatag caccatacga agaagggaat cgttttaatc acgatcctct
    12481 tcgttctcga aaattattat tgcataagcg tgaaatcatt aaattgggtg atcaaacacg
    12541 tgagattggt tattcgattg tgccgttaaa gctttatttg aagcatggac attgtaaagt
    12601 attacttggt gttgcacgag gtaagaaaaa atatgataaa cgtcaagctt tgaaagaaaa
    12661 agcagtcaaa cgagatgttg cgcgcgatat gaaagcccgt tattaagcga tttagttgct
    12721 taatcgggct atatttgata tagttatatg tgcttttgta aattacaaaa gtatgatttg
    12781 tttgatttat tatttcgggg gcgtttctgg attcgacagg ggtcccccga gctcattaag
    12841 cgtgtcggag ggttgtcttc gtcatcaaca cacacagttt ataataactg gcaaaacaaa
    12901 caataatttc gcagtagctg cctaatcgca ctctgcatcg cctaacagca tttcctatgt
    12961 gctgttaacg cgattcaacc ttaataggat atgctagaca ctgccgtttg aagtctgttt
    13021 agaagaaact taatcaagct agcatcatgt tggttgttta tcacttttca tgatgcgaaa
    13081 cctttcgata aactacacac gtagaaagat gtgtatcagg acctctggac gcgggttcaa
    13141 atcccgccgt ctccatattt gtagcctaca acctttgtgg atgtgggctt ttttatatgt
    13201 tttttatctt ttcttgtgag gaaggttaaa ttagctgtgt acgttgatat gatagtatct
    13261 gcttaggttc aaattttcat gaatgaaaaa ttaatagttg tgtacatata agattttgcg
    13321 ttaaaagttg aaagaatgtg tgtcaaataa gtgtcaaaaa agttggattc tgagttttac
    13381 attcaacatt gttcatgaag aaacttcttt atacgcaaaa aattctccat gttatatatg
    13441 tcaatataaa aatgtgaatc gtctacactt aattggataa atggctactg a
//
LOCUS       DALMNS010000081        13488 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.081, whole genome shotgun sequence.
ACCESSION   DALMNS010000081 DALMNS010000000
VERSION     DALMNS010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 13488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13488
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.081"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..254)
                     /locus_tag="O6Y56_001961"
     CDS             complement(<1..254)
                     /locus_tag="O6Y56_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498811.1"
                     /note="with GatAB forms a phosphoenolpyruvate-dependent
                     sugar phosphotransferase transporter for galactitol;
                     subunit IIC forms the translocation channel and contains
                     the substrate binding site; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HDB5575209.1"
                     /translation="MSYFTDFVRGFLDLGATVILPVVIFLLGLFFRQKIGAAFRSGLT
                     IGVAFVGIFLVIDLLVKNLGPAAQAMVKNLGVSLNVIDVG"
     gene            complement(481..759)
                     /locus_tag="O6Y56_001962"
     CDS             complement(481..759)
                     /locus_tag="O6Y56_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDB5575210.1"
                     /translation="MKQVLVACGAGIATSTVVNNAIEEMAKEHNIKVDIKQIKITEVG
                     PYEDTADLLVTTAMTKKEYKFPVINARNFLTGIGIEETKQQILTELQK"
     gene            complement(782..1249)
                     /locus_tag="O6Y56_001963"
     CDS             complement(782..1249)
                     /locus_tag="O6Y56_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDB5575211.1"
                     /translation="MGQQLVHKENIMLNLSATDKESVLSQMSDVLFQNGFVKSTFKDA
                     VIDREKEFATGLPTHLCSVAIPHTDVEHINHRTIGVAVLEKEVPFIEMGTLDQQTEVK
                     IVFMLAMDKVDDQLKLLQQLMQIFQSEEKLEQILRTKDETILATLINDYLEYN"
     gene            complement(1234..3330)
                     /locus_tag="O6Y56_001964"
     CDS             complement(1234..3330)
                     /locus_tag="O6Y56_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator"
                     /protein_id="HDB5575212.1"
                     /translation="MNGDNQQILREIVLNPTIHGKELESIFGLSRRQLGYRIQKINLW
                     LEQEGYPKLERTSQGNFIVSSEIMTLFKRDVSEQQMLNGNNVIFSIETRRYYLMLMLF
                     SKENAMSLNHFSIDLQVSKNTVIHDINHVKEQLENHGLSLKYSRKHGYEIVGDEFEVR
                     RFFIKLIDQRLNHDITKSEVLKALNLTFEDIAYQKDKIKQVEQFLKSRFIDKSLSSLP
                     YVLCVIRRRIQSGHVINPLNINYQYLRDTKEYQATEIMTQHEPDLPEAEKLYLTLHLL
                     STSVQWTDLQESDNISNLTMAIAQMIHHFEQITFINIEDKEKLSQQLLLHLTPAFYRI
                     KYNLTDRDELINPLQGNYQSLFHMVKQSCQSLTEYFGKSLPDNEIAYLTMLFGGSLRR
                     QDENFDGKIKAIIVCTQGTSVSQMMLYELRNLFPEIIFLDAISLRTFENYTLDYDIVF
                     SPMFVLTHKKLFITKVALSENEQRKLRKDVMKYINKESADIDKEINKLMALIERTTTV
                     NDITELRDGLEDFIANYNSISTINGSIVTQNKTLDLADLIPARHVKRIHHVENIDEAI
                     AKASDVLVANHFIDIKYIHEMQQVFDDSYMVIMQNIAIPHAYSEKHVHKTAMSMLILQ
                     EPIYMSDGTAIHIIVPIAAVDKVTHLRALLQLRDVAQDNDAIKRIIQSRRNSDVNEIL
                     KNYSNKEARENGWDSN"
     gene            complement(3461..3558)
                     /locus_tag="O6Y56_001965"
                     /pseudo
     CDS             complement(3461..3558)
                     /locus_tag="O6Y56_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498807.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3668..4603)
                     /locus_tag="O6Y56_001966"
     CDS             complement(3668..4603)
                     /locus_tag="O6Y56_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HDB5575213.1"
                     /translation="MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTVAGNQSVD
                     KNTTNALNVLDIMGRQDIAVAKGADRPLIKPAAFASEIHGESGLDGPKLPSTPSRQAV
                     AMPASDVIINKVMTSDTPVTIVATGPLTNVATALIREPRIAEHIESITLMGGGTFGNW
                     TPTAEFNIWVDAEAAKRVFESGITINVFGLDVTHQVLADDHVIERFESINNPVAQFVV
                     ELLQFFKKTYKTHFNMDGGPIHDACTILYLLQPELFTMVPVNIDIEHQSPLTYGTMAV
                     DLNHVTGKPANAYFATAVDVEEVWNLIDHKLRTYE"
     gene            4965..6494
                     /locus_tag="O6Y56_001967"
     CDS             4965..6494
                     /locus_tag="O6Y56_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDB5575214.1"
                     /translation="MKSLFEKAQQFGKSFMLPIAILPAAGLLLGIGGALSNPNTVKAY
                     PILDITLLQNIFTLMSAAGSIVFQNLPVIFAIGVAIGLSRSDKGTAGLAALLGFLIMN
                     ATMNGLLTITGTLAKDQLAQNGQGMVLGIQTVETGVFGGIITGIMTAILHNKYHKVVL
                     PPYLGFFGGSRFVPIVTAFAAIFLGVLMFFIWPSIQAGIYHVGGFVTKTGAIGTFVYG
                     FILRLLGPLGLHHIFYLPFWQTALGGTLEVKGHLVQGTQNIFFAQLGDPDVTKYYSGV
                     SRFMSGRFITMMFGLCGAALAIYHTAKPEHKKVVGGLMLSAALTSFLTGITEPLEFSF
                     LFVAPILYVIHAFFDGLAFMMADIFNITIGQTFSGGFIDFLLFGVLQGNSKTNYLYVI
                     PIGIVWFCLYYIVFRFLITKFNFKTPGREDKVAAQQVEATERAQTIVAGLGGEDNIEI
                     VDCCATRLRVTLHQNDKVDKVLLESTGAKGVIQQGTGVQVIYGPHVTVIKNEIEELLG
                     D"
     gene            complement(6815..7768)
                     /locus_tag="O6Y56_001968"
     CDS             complement(6815..7768)
                     /locus_tag="O6Y56_001968"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HDB5575215.1"
                     /translation="MNKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKV
                     RGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGAAQKPGETRLDLVSKNLKI
                     FKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGSGTILDSARFRLLL
                     SEAFDVAPRSVDAQIIGEHGDTELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQT
                     RDAAYDIIQAKGATYYGVAMGLARITEAIFRNEDAVLTVSALLEGEYDEEDVYIGVPA
                     VINRNGIRNVVEIPLNDEEQSKFAHSAKTLKDIMAEAEELK"
     gene            complement(8079..8186)
                     /locus_tag="O6Y56_001969"
     CDS             complement(8079..8186)
                     /locus_tag="O6Y56_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575216.1"
                     /translation="MSVCTPTIARIYLTNSKNIVVFLEKSKHDNKNVKV"
     gene            8341..9486
                     /locus_tag="O6Y56_001970"
     CDS             8341..9486
                     /locus_tag="O6Y56_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide dioxygenase"
                     /protein_id="HDB5575217.1"
                     /translation="MLTEQEKDIIKQTVPLLKEKGTEITSTFYPKMFKAHPELLNMFN
                     QTNQKRGMQSSALAQAVMAAAVNIDNLSIIKPVIMPVAYKHCALQVYAEHYPIVGENL
                     LKAIQDVTGLEENDPVIQAWAKAYGVIADVFIQIEKEIYDQMMWIGFKPFKITNIKQE
                     SEDIKSFTVETEEYDFSEFTPGQYITVDVSSDKLPYRAKRHYSIVSGDKNHLTFGVKR
                     DVTTEHEGEVSTILHDEIKEGDTINLAAPVGGFVLENTTEPQLFLGSGIGVTPLVAMY
                     EAASAKGLDTQMVQVAENEQHLPFKDNFNSIASHHDNAKLYTHLKDKQGYIGAEELQV
                     FLANKPEIYICGGTKFLQSMIEALKSLNYDMDRVHYETFIPRLSVAV"
     gene            9512..9685
                     /locus_tag="O6Y56_001971"
     CDS             9512..9685
                     /locus_tag="O6Y56_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575218.1"
                     /translation="MKLNQRYVKVFALYFVSIVTANIIVKNNNLIKTLIQTIAGYTVF
                     AVGLKYLTKRKNK"
     gene            9842..10198
                     /locus_tag="O6Y56_001972"
     CDS             9842..10198
                     /locus_tag="O6Y56_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HDB5575219.1"
                     /translation="MTVDIGRIYDNKDNTDAIRILVDRVWPRGISKRTANLDYWLKDI
                     APSTELRQWFQHDPKLFGAFKEKYEKELRDQDAQKDAFEKLKDIVNQHNHVLLLYAAK
                     DTKHNQAVVLQQLLNT"
     gene            10396..11871
                     /locus_tag="O6Y56_001973"
     CDS             10396..11871
                     /locus_tag="O6Y56_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000669654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDB5575220.1"
                     /translation="MKFKRLATIFSAVLVLSGCGSMHSSGKDLNISLPLKTKSIAPYE
                     TDVPVKIGAAESLFKTNDQGKIEKVLVKSYHQPNDTTLDIELKDNIKFQNGQKLTAEK
                     VKSSLENSIKKSDLVKYSLPISSITAKGQKLTIKTSSAYPELVSELANPFMAIYDTDA
                     KSDVNQTPVATGPYQIKDYKQSRKISLSNFKDYWQGKPKLDHITVTYQEDGNNRVRNL
                     ESQKDDLITDVPVNKVQDIENNQNLKVSKESGFRTSLLMYNHTNKKMTKSVREALDHI
                     IDRQGIADHIYQGYAKPATSPFNDKIPYIKEPKLTKQNIEQAKTLLAKDGYTKEHPLK
                     IKLITYDGRPELSKIAQVLQSDAKKANIEIDIKSVDDIEGYLTDRSAWDATMYSFGTI
                     PRGDTGYFFNQAYKKDGAINKGDYNNSNVDALINQLNHTVDVKERHNISNDIIKLSSR
                     DVPNSYIAYNDQIVAANSKVKNYKVTPEGIYLIDYRTTIER"
     gene            complement(12185..13327)
                     /locus_tag="O6Y56_001974"
     CDS             complement(12185..13327)
                     /locus_tag="O6Y56_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family intramembrane metalloprotease"
                     /protein_id="HDB5575221.1"
                     /translation="MSSAITQSTKTSDIHNESIDKQMEAKAHETAQNADLKNEARSLF
                     DNATKSIGRLAGNDESLNLNLKDMFSEVFKPHTKNEADEIFIAGTAKTTPAICDISEE
                     WGKPWLFSRVFIAFTVTFIGLWVMAAIFNNTNAIPGLIFIGALTVPLSGLFFFYESNA
                     FKNISIFEVIIMFFIGGVFSLLSTMVLYRFVVFSDQFERFGSLTFFDAFLVGLVEETG
                     KALIIVYFVNKLKTNKILNGLLIGAAIGAGFAVFESAGYILNFALGENVPLLDIVFTR
                     AWTAIGGHLVWSAIVGAAIVIVKEQHGFEFKDIFDKRFLIFFLSAVGLHGIWDTSLTI
                     LGSDTLKIFILIVIVWILVFILMGAGLKQVNLLQKEFKEQQKKVDE"
BASE COUNT         4404 a         2443 c         2098 g         4543 t
ORIGIN      
        1 caacctacat caatcacatt cagactgacg cctaaatttt taaccatcgc ttgtgctgct
       61 ggccctaaat ttttaactaa taaatcgatg actaagaaaa tccctacaaa agccacacct
      121 attgttaaac cagacctaaa tgccgctcca attttctgcc taaagaatag gccaagcaag
      181 aatatgacaa ccggtaaaat aacagttgca cctaaatcta aaaatcccct tacaaaatca
      241 gtgaagtaac tcatatttaa accctccctg ttatatatac attgtcacga tactttccga
      301 ttgtgattac atttgtcgtt acggtcattt caacgactac ccttgctaca ttcgactgca
      361 atcactttga attacagtca ctgcgtttct atgtcatcaa caatcatttg tcgtgatagt
      421 catttatatg caatttgcat atatttatat gttattgacc cacattacat atcaattcag
      481 ttatttttgt aactctgtta agatttgttg ttttgtttct tcaataccaa taccagttaa
      541 gaaattacgt gcgttgataa ctgggaattt atattctttc tttgtcattg cagttgtaac
      601 taataaatct gcagtgtctt cataaggtcc aacttctgta attttgattt gtttaatatc
      661 tactttaata ttgtgttcct ttgccatttc ctcaattgca ttatttacta ctgttgacgt
      721 tgcaatacct gcaccacacg ctactaatac ttgtttcatt ttcaattcct ccaattaatt
      781 tttagttata ttccaaataa tcattgatta gtgttgctaa aattgtttca tctttcgttc
      841 gtagaatctg ctccaatttt tcttcacttt gaaaaatttg catcaactgt tgtaacagct
      901 taagttgatc atctacttta tccattgcta acataaaaac gattttcact tctgtctgtt
      961 gatcaagtgt tcccatttca ataaacggca cttctttttc tagaacagcc acacctatcg
     1021 ttctatggtt aatatgttcg acatctgtat gcggtatagc gaccgaacat agatgcgttg
     1081 gtaaaccagt agcaaattct ttttctctgt cgatgactgc atctttaaac gttgacttca
     1141 cgaacccatt ttgaaataac acatctgaca tttgtgacaa tacggattct ttatcagttg
     1201 ccgacaaatt gagcattata ttttctttat gcactaattg ctgtcccatc cattttccct
     1261 cgcttcttta tttgaataat tttttaaaat ctcattaaca tcagaatttc tgcgactttg
     1321 tatgatgcgc ttaattgcgt cattgtcttg cgccacatct ctcaattgta gtaacgctct
     1381 taagtgtgtc actttatcaa cagcagcaat aggtacaata atatggattg ctgtgccatc
     1441 tgacatgtat attggttctt gtaatatcaa catactcatc gctgttttat gtacatgctt
     1501 ttcagagtat gcatgtggaa tagcaatatt ttgcatgata accatatacg aatcatcaaa
     1561 tacctgttgc atctcatgaa tatatttaat atcaataaaa tgattagcaa ctaacacatc
     1621 acttgcttta gcaatagctt catcaatatt ttcaacatga tgtattcttt tcacgtgcct
     1681 tgctggtatc aagtcagcta aatctaatgt cttattttgt gtgacaatcg atccattaat
     1741 ggttgaaatt gaattataat tcgcaataaa atcttctaga ccatcacgta gttctgtaat
     1801 gtcattaact gtcgttgtgc gttcaattaa tgccattaac ttgtttattt ccttatcaat
     1861 gtcagccgat tccttattaa tgtacttcat cacatcttta cgtaactttc gttgctcatt
     1921 ttcagataaa gctacttttg tgataaataa ttttttatgt gttaggacaa acattggtga
     1981 aaagacgatg tcataatcta atgtgtaatt ttcaaatgtt ctaagtgaaa tcgcatctaa
     2041 gaaaataatt tctggaaata agtttcgcaa ctcgtataac atcatttgtg atactgacgt
     2101 gccttgtgta cacacgataa tagcttttat cttgccatcg aagttttcat cttgacgtct
     2161 caaactacct ccgaacaaca tggttaaata tgctatttca ttatcaggca acgattttcc
     2221 gaaatattca gttaacgatt gacatgattg tttcaccata tgaaataagg attgataatt
     2281 tccttgtaaa ggatttatta attcatcacg atccgttaag ttatatttaa tcctataaaa
     2341 agcaggcgtt aaatgtaaca agagttgctg tgataatttc tccttatctt caatgttaat
     2401 aaaagtgatt tgttcaaaat ggtgaatcat ttgagcgatg gccatcgtta aattcgatat
     2461 attatctgat tcctgcaaat cagtccattg cacacttgtt gaaagtaagt gtaatgtcaa
     2521 atataacttt tccgcttctg gcaaatccgg ctcatgttgc gtcataatct ccgttgcttg
     2581 atattctttc gtatccctca aatactgata attaatattt aatggattaa tcacatgacc
     2641 actttgaatt cgtctacgaa tcacacaaag gacataaggc aatgaactaa gtgatttgtc
     2701 tataaagcga ctcttcaaaa attgttctac ctgtttgatc ttgtcttttt gatatgcgat
     2761 atcttcgaat gttaagttga gcgcctttaa aacttcactt ttagtaatat catgattcaa
     2821 cctttgatca atcaacttaa tgaagaaacg gcgaacttca aattcatcac caacaatttc
     2881 ataaccatgt tttcgagaat acttaagtga caaaccatga ttttccaatt gctctttcac
     2941 atgatttata tcgtgaatga cagtattttt actgacttgt aaatcaattg aaaaatggtt
     3001 tagagacatt gcgttttcct tactaaaaag catgagcatt aaataataac gacgtgtttc
     3061 tatgctaaaa atgacattgt ttccgtttaa catttgctgc tccgatacat ctcgtttgaa
     3121 taacgtcatg atttcagaac ttacaataaa atttccttgg cttgttcttt caagttttgg
     3181 ataaccctct tgttcaagcc acaaattgat tttttgaatg cgatatccta gttgtctacg
     3241 agacaaacca aatatcgatt caagttcttt accatgaata gtaggattca atacaatttc
     3301 tctgagtatt tgctgattat ccccgttcat gttcgatcct cctttgagca tctgagctca
     3361 atttatcatc aatcgtcaca ccgatgtaca cactttgaac acatattttc aaaatgagca
     3421 tgtacatcat tgtgatgttt taacaacatt tcaattatat ctatattttt tgtgatttta
     3481 atcttttaaa ataaagcaat tgaaattttt gcatatattt ttgtattttg tgttttttga
     3541 agcattttta acatacatag ctcaatcatt atcaaattgt catgaccatt gtaatccaat
     3601 acaaaaaccc taaggacgct taaatcaggc accttagggc taactgtatc tatttaatta
     3661 agtattatta ttcgtatgta cgtaacttat gatctatcaa gttccacact tcttcaacat
     3721 caactgctgt agcaaaataa gcattggcag gcttacctgt aacatgattt aaatcgacag
     3781 ccatagtgcc ataagttagt ggactttgat gttcaatgtc gatattaacg ggtaccattg
     3841 taaacaattc tggttgtaac aaatacaaaa tcgtacaagc atcatgtatt ggaccaccgt
     3901 ccatattaaa gtgagtcttg tatgttttct taaagaattg caataattct acgacgaact
     3961 gtgcaacagg attattgata ctttcaaagc gttcaatcac gtgatcgtcg gctaaaactt
     4021 gatgtgttac atctaaacca aacacattta tagtaatccc actttcaaaa acacgcttcg
     4081 ctgcttcagc atctacccaa atattgaatt ctgctgtagg cgtccaattt ccaaatgtac
     4141 caccacccat caaagtaata gattcaatat gctcagcgat tcttggctca cgaatcaatg
     4201 ccgttgctac attcgtaaga ggacctgtcg ctacaattgt tacaggtgta tcactcgtca
     4261 tcactttgtt aataatcaca tctgatgctg gcattgcaac tgcttgacgt gatggtgtcg
     4321 acggtagttt cggaccatct aatccagatt ccccatgtat ttcagaagca aaggcagctg
     4381 gtttaattaa cggcctatcc gcacctttcg ctactgctat atcttggcgt cccataatat
     4441 ccaatacgtt caaggcgttt gtcgtattct tgtcaactga ttgattacct gcgactgtgg
     4501 ttacagctaa tatctctagt ggactgtcaa ttgcccccgc taaaattaat gctattgcat
     4561 catcgtgtcc tggatcacaa tccataataa tctttctttt catttatata tccacctttc
     4621 ttaagttgtt atcgatagct tatgtatatt tatttatgtg gtgaatcatg tttattttga
     4681 aaaatagttt taactttctc atagttttgg atacaaacac tatttatcta ttttatggct
     4741 tataaattta tccgatattc tttgtcaccc tacctcgcta aaaaatagga tgtctacaga
     4801 tttatacgac ttttgtcaac tcattttcac aacaatataa acagcaattt atatgattgt
     4861 tacatgattc aaacaatttt tatgaaaaat attttcatcc acagaatata tattgatatt
     4921 aaatttctca aaagctatat tgagaataat taggagggat gttgatgaaa tctttatttg
     4981 aaaaagcaca gcagttcggc aagtccttta tgttacctat cgcaatctta ccagctgcag
     5041 gtctattgtt gggtatcggt ggtgcattaa gtaatccaaa caccgttaaa gcatacccta
     5101 ttttagatat taccttatta caaaatattt ttacattaat gtcagctgca ggtagtattg
     5161 ttttccaaaa tttaccagtc atctttgcaa ttggtgtcgc aatcggatta tctagaagcg
     5221 ataaaggtac tgcaggttta gctgcactgc tcggtttctt aattatgaac gcaactatga
     5281 atggtttatt aactatcacg ggcacattgg caaaagatca gcttgcacaa aatggacaag
     5341 gcatggtgct cggtatacaa acggttgaaa ccggtgtttt tggcgggatt atcacaggta
     5401 ttatgaccgc aatacttcac aacaaatatc acaaagtggt attaccaccg tatttaggtt
     5461 tctttggtgg ctctagattt gtccctattg tcacagcatt tgccgcaatc tttttaggtg
     5521 tattgatgtt tttcatttgg ccaagcatac aagccggcat ttatcatgtt ggtggatttg
     5581 taacgaaaac aggtgccatc ggtacttttg tttatggctt catcttaaga ttgttaggtc
     5641 cactcggttt acatcatatt ttttacttac cgttttggca gacggcactt ggtggtactt
     5701 tagaagtcaa agggcactta gttcaaggta cgcagaacat cttctttgct caacttggtg
     5761 atccagatgt gacgaagtat tattcaggtg tgtcacgctt tatgtcaggc cgttttatta
     5821 cgatgatgtt cggcttatgt ggtgccgcac ttgcaattta tcacacagct aaacctgaac
     5881 ataaaaaagt tgtcggcggt ttaatgttat ccgctgcact cacttcattt ttaacaggta
     5941 ttaccgaacc tttagagttt agtttcctgt ttgtcgcacc tattctttat gtaatccatg
     6001 ccttctttga tggattagca tttatgatgg cagacatttt caacattaca attggtcaaa
     6061 ccttcagtgg aggctttatc gatttcttac tttttggtgt gctacaaggt aatagtaaaa
     6121 caaactacct atacgtcata cctattggaa ttgtgtggtt ctgtttatat tacatcgttt
     6181 tcagattctt aattacgaaa tttaatttca aaacacctgg tcgtgaagat aaagttgcag
     6241 cacaacaagt tgaggctact gaaagagcac aaactattgt tgctggtttg ggaggcgaag
     6301 ataacattga aatcgttgac tgttgtgcaa cgagactacg cgtcacactt catcaaaatg
     6361 acaaagtcga taaagtatta ctcgaaagta ctggtgccaa aggtgtaatc cagcaaggca
     6421 ctggtgtgca agtaatttat gggcctcacg ttacagttat caaaaatgaa attgaagaat
     6481 tgctcgggga ttaagactaa ccgaaatatc aacagaacta atggcaacga tgtacgaagt
     6541 aagaagtaac atcgttgctt ttatttttaa tgttgcattt gaaacattaa gttcatcatg
     6601 cactgtagtg agtccgcaaa tcgcctctgc tagacaatca tcttaatgct atgattaaag
     6661 cttaagtgcc agatttgaat ttaatttcaa caacgacttt cactacatta aaaatagggc
     6721 tactcgacac atatagttgt atcaaatagc cctttataca attttttggg gtaaggtttt
     6781 acaatttttg gaatggtata gattttataa aaagttattt aagttcttct gcttcagcca
     6841 taatatcttt taatgtttta gctgaatgtg cgaacttgct ttgttcttcg tcgtttaatg
     6901 ggatttctac gacgttgcga ataccgtttc tattgatgac tgctggaaca ccaatataaa
     6961 catcttcttc atcatattcg ccttctaata atgctgatac agtcaatacg gcatcttcat
     7021 ttctgaaaat cgcttcagta attctagcta atcccattgc aacaccataa taagtggcac
     7081 ctttagcttg aataatgtca tatgctgcat cacgtgtttg aacaaaaatt tgttcaattt
     7141 gcgctttgcc ctcaggacgt tgttcaagta atgtcttcaa aggttgaccc gcaatattag
     7201 cgtgtgacca tactggtaat tcagtgtcac catgttcacc aataatttga gcatcgacgc
     7261 tacgtggcgc aacatcgaac gcttcgctta acaataatct aaagcgtgca gagtctaaaa
     7321 ttgtaccaga acctataaca cgttctttag gtaaaccaga gaatttccat gttgcatacg
     7381 ctaaaatatc aacaggattt gtagctacca agaaaatacc atcaaatttt gatgccatta
     7441 cttcaccaac aattgatttg aatattttca agtttttaga tactaaatct aaacgtgttt
     7501 ctccaggttt ttgtgcagca ccagcacaga tgacaactag atccgcatca tgacaatcac
     7561 tgtattcgcc agctttcaca cgaactgttg ttggagaata tggtgtggca tgttttaaat
     7621 ccataacatc tcctcgaact ttttcagtgt ctaaatcaat gatgactaat tcatcaacaa
     7681 tgctttggtt cactaatgaa aatgcgtagc ttgaacctac tgcaccatta cctattaata
     7741 caactttgtt ccctttaaat ttgttcatta caaaaactcc cttatgatta attcactaac
     7801 atacatgtag tttcaaatat gttagtttaa tgctgcttat tgacgataca aaagcaaata
     7861 aacatctctt ttattttcaa cgcataactt aaaaggtcat gtgtcatccg cttttaagtt
     7921 tgtgatttat ttcacatata aaatgtaaca tgcattaagt actgggtcaa tattaaattg
     7981 tgatttattt cacattttaa tttaattttt acaccttttt aatttgtata cgattacatc
     8041 ttagacgtct ttagtcttcg tacttcgcca gtgattattt acactttcac atttttatta
     8101 tcatgtttac ttttttctaa gaaaacaaca atgttttttg aattagtcaa ataaatgcgc
     8161 gcaatcgtcg gtgtgcaaac agacaattgt acacaatgct tattgataag tatttaaaaa
     8221 attaaaaatg tcatacaatt atcaaatttg ccattttatt tatattttct caaaccaatt
     8281 aattgaatat cgaaattttt agtagaataa tcaaaataga cagattaaag gaggagtatc
     8341 atgcttacag aacaagagaa agacataatc aaacaaacgg tgccattgct taaagaaaaa
     8401 ggaacagaaa ttacgtcaac tttttatccg aaaatgttta aggcacatcc tgaactttta
     8461 aatatgttta atcaaacgaa ccaaaaaaga ggcatgcaat cttcagcatt agcacaagca
     8521 gtaatggctg cagctgttaa catcgataac ttaagtatta ttaaaccagt cattatgcca
     8581 gttgcatata aacactgcgc actacaagtt tatgctgaac attatccaat tgtgggggaa
     8641 aatttattaa aagccattca agacgtgaca ggattagaag aaaatgaccc tgtcattcaa
     8701 gcttgggcga aagcatatgg tgttattgcg gatgtgttca tccaaattga aaaagaaatt
     8761 tatgatcaaa tgatgtggat tggttttaaa ccattcaaaa ttaccaatat taaacaagaa
     8821 tctgaagaca ttaaatcatt tacagttgaa actgaagaat atgactttag tgaatttaca
     8881 ccaggccaat acatcacagt tgatgtttct agtgataaac ttccatatag agctaaacgt
     8941 cactattcta tcgtatcagg tgataaaaac catttaactt ttggcgttaa acgtgatgtt
     9001 acaacagaac atgaaggcga agtttcaaca attttacacg atgagattaa agaaggcgat
     9061 acgattaatc tagctgcgcc tgtaggtgga ttcgtattag agaatacgac tgaaccacaa
     9121 cttttcttag gttcaggtat tggcgtcaca cctttagtag caatgtatga agctgcctct
     9181 gccaaaggtt tagatacaca gatggttcaa gttgctgaaa atgaacaaca tttacctttc
     9241 aaagacaact tcaacagtat cgcaagccat catgacaacg ctaagttata tactcactta
     9301 aaagataaac aaggctatat tggcgctgaa gaattacaag tatttttagc aaataaacct
     9361 gaaatttata tctgtggtgg tacaaaattc ttacaatcta tgatcgaagc acttaaatct
     9421 ttaaattacg atatggatcg cgtacactac gaaacattta ttccaagact aagcgttgca
     9481 gtataactga gaaaagaggt ttagtgctca tatgaaactt aatcaacgtt acgtaaaagt
     9541 atttgcatta tatttcgtaa gtattgttac tgcaaatatt attgttaaaa ataataattt
     9601 aattaaaaca ttgatacaaa ccatagccgg gtacacggtc tttgcagttg gtttgaagta
     9661 tttaactaaa cgtaaaaata aatgacatct atacaaaaac agctatgact ttactttgtc
     9721 atggctgttt tttaattggg agttggacag aaatgatatt ttcgcaaaat ttatttcgtc
     9781 gtcccacccc aacatgcatt gatgtatgct cactgaattt cataagaaag gagttcacaa
     9841 gatgaccgta gatattggac ggatttatga caataaagat aataccgacg ctattcgtat
     9901 cctagtcgat agagtctggc cgagaggtat ttcgaaaaga actgctaacc tagattattg
     9961 gttaaaagac attgctccat ctactgagtt gcgacaatgg ttccaacatg atcctaaact
    10021 ttttggagct tttaaagaaa aatacgaaaa agaattacgt gatcaggatg cgcaaaaaga
    10081 tgcttttgaa aaattaaagg atattgtaaa tcagcataat catgttctat tgttatatgc
    10141 agcaaaagat actaaacata accaagctgt agtactacag cagttgctca atacttaggt
    10201 atatatgttt gtcgtgaatc actatacatg tcgctaactt catttctaat atttattttt
    10261 aaaaagcata attactacaa ttaattgaac tttaataatt actaaacttg aacaacattt
    10321 tactttaaca aaataaagtt ttaaaatatt aattattggg ttttacatag taattagaaa
    10381 gagagtgtta atgaaatgaa gtttaaaaga ctagcaacta tattttcagc agtattagtg
    10441 ttatcaggat gtggctcaat gcattcatct ggcaaagact taaatatttc gttaccgtta
    10501 aaaacaaagt ctattgcacc ttatgaaaca gatgtaccag ttaagattgg tgctgcagaa
    10561 tcattattta aaacaaatga tcaaggaaaa atagaaaaag tattagtgaa atcgtatcat
    10621 caaccaaatg atacaacgtt agatattgaa ttaaaagata atattaaatt tcaaaacggt
    10681 caaaaattga ctgcagaaaa agtgaaatct agccttgaaa atagcataaa aaaaagcgac
    10741 ttggtcaaat attcattacc aatatcatca attaccgcta aaggtcaaaa actgacaatt
    10801 aaaaccagct ccgcttaccc tgaacttgta tctgaattag ctaatccttt tatggcaatt
    10861 tatgatacag atgctaaatc agatgttaat caaactcctg ttgctacagg cccttaccaa
    10921 ataaaagatt ataagcaatc tcgaaaaata tcattgtcga attttaagga ctattggcaa
    10981 ggtaaaccga aacttgatca tattactgtg acgtaccaag aagatggcaa taatcgcgtc
    11041 agaaatttag aatctcaaaa agatgactta ataactgatg tcccagttaa taaagttcaa
    11101 gacatagaaa ataatcaaaa tttaaaagtg tcaaaagaat ctggatttag aacttcttta
    11161 cttatgtata atcatactaa taaaaaaatg actaaatccg ttcgtgaagc attagatcat
    11221 atcattgata gacaaggtat tgcagatcat atttatcaag gttacgcgaa acctgcaacg
    11281 agtccattta atgataaaat tccatatatt aaagaaccta agttaaccaa acaaaatatc
    11341 gaacaagcaa aaacgttatt agctaaagat ggttatacaa aagaacaccc tttaaaaatt
    11401 aagttaatta cgtatgacgg tcgtccagaa ctatcgaaaa ttgcgcaagt attacaatca
    11461 gatgctaaaa aagcaaatat tgaaatcgac attaaaagtg ttgatgacat agaaggttac
    11521 ttaacagacc gttctgcatg ggatgcaacg atgtatagtt tcggaacgat tcctcgtgga
    11581 gatacaggct atttctttaa tcaagcatat aaaaaagatg gtgctattaa taaaggagac
    11641 tacaataata gcaacgttga tgctttaatt aatcaattga atcacactgt agatgttaag
    11701 gaacgtcaca atatttctaa tgatattatt aaattatcaa gtcgagatgt accaaacagt
    11761 tatattgctt acaacgatca aatagtcgct gctaactcta aggttaaaaa ttataaagta
    11821 acacctgaag gtatctattt aatcgattat cgaacaacga ttgaacgata agggagtgtg
    11881 ggacattgat ttatgtctca gccccacttc aactataaaa accacgccga agtcatccaa
    11941 tatgattatg gcgtggttta atttgcttat atgattgtat taatttctgt ttgatgaatt
    12001 tcaataaaat gattattaca tactttcagt gaatcatatt cattttatat aaacctaatt
    12061 gtcactattt gtttaacgtg aaacactttt ttaactccaa aaagtattcc acttccactc
    12121 ttttaaagac taattataaa aatagcttat gtcacaaaca tatgagcaac attagcttta
    12181 attattattc gtctactttt ttctgttgtt ctttaaattc tttctgcagt aaattcactt
    12241 gttttaaacc tgcccccatt aaaatgaata caagtatcca cacaataacg attaaaataa
    12301 atattttcaa cgtatcactg ccaagtatag ttaaagatgt atcccaaatg ccatgtaaac
    12361 caacggctga taaaaagaat attaaaaagc gtttatcaaa aatatctttg aattcaaagc
    12421 catgctgttc tttcacaata actattgcag caccaacaat cgctgaccaa actaaatgac
    12481 caccaatcgc agtccacgca cgtgtgaaga caatatctaa taatgggaca ttttccccta
    12541 aagcgaaatt caaaatataa cctgctgatt caaaaactgc gaaccctgca ccaatagcag
    12601 caccgattaa taatccattc aaaatcttat ttgttttcaa tttattgacg aaataaacaa
    12661 taatgagcgc ttttccagtt tcttcaacta atcctactaa aaatgcatcg aaaaatgtta
    12721 aagaaccaaa cctttcgaat tgatcactaa aaacgacaaa tctatataat accatcgtac
    12781 ttagtaatga aaatactccg ccaataaaga acatgataat aacttcaaaa atgctaatat
    12841 ttttaaacgc atttgattca taaaagaaga acaaacccga taatggtact gttaaagccc
    12901 ctataaaaat gagacccgga atcgcgtttg tgttattaaa aatcgctgcc atgacccata
    12961 atccaataaa tgttactgtg aaagcgatga atactcgaga aaagagccat ggcttccccc
    13021 attcttctga tatatcacaa attgctggcg tagttttagc agtacccgct ataaatattt
    13081 catctgcttc gtttttagta tgtggcttaa atacttcaga aaacatatct tttaaattaa
    13141 gatttaagct ttcatcattg ccggctagtc taccgattga tttggttgca ttatcaaata
    13201 aacttcttgc ttcgtttttt aaatctgcat tttgcgctgt ttcatgcgct ttggcttcca
    13261 tttgtttatc gatagattca ttatgtatgt cggacgtctt agttgattgt gtaattgctg
    13321 atgacatccc ctcttcacct gtattaggtg caactgattg cgtttgtatt gtctcttctt
    13381 tttctgtatt tcttcgatga ttaagacctt ccatagactt acctactttc acttttcata
    13441 ataaaactat tttaatttaa tattgatgga ttttccatat tttaatat
//
LOCUS       DALMNS010000082        13297 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.082, whole genome shotgun sequence.
ACCESSION   DALMNS010000082 DALMNS010000000
VERSION     DALMNS010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 13297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13297
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.082"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..869
                     /locus_tag="O6Y56_001975"
     CDS             <1..869
                     /locus_tag="O6Y56_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HDB5575222.1"
                     /translation="HHLKGRILVSTEGINGTLSGTKEETEQYMAHMHADERFKDMVFK
                     IDEAEGHAFKKMHVRPRKEIVALDLEEDVDPRHTTGQYLSPVEFRKALEDDDTVIIDA
                     RNDYEFDLGHFRGAIRPNITRFRDLPDWIKENKALFADKKVVTYCTGGIRCEKFSGWL
                     LKEGFEDVAQLHGGIATYGKDPETKGEYWDGKMYVFDDRISVNINQVEKTIIGKDWFD
                     GKPCERYINCANPECNKQILVSEENEAKYLGACSYECAKHERNRYIQANNISDNEWQH
                     RLTNFDDLHQHA"
     gene            1021..1659
                     /gene="pcp"
                     /locus_tag="O6Y56_001976"
     CDS             1021..1659
                     /gene="pcp"
                     /locus_tag="O6Y56_001976"
                     /EC_number="3.4.19.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyroglutamyl-peptidase I"
                     /protein_id="HDB5575223.1"
                     /translation="MHILVTGFAPFDNQNINPSWEAVSLLENIIGTHTIDKLKLPTSF
                     KKVDTIINKKLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQPIDQAI
                     HLDGAPAYFSNLPVKAMTQSIINQGLPGALSNSAGTYVCNHLLYHLGYLQDKHYPHLR
                     FGFIHVPYIPEQIGGKPDTPSIPLEKIVAGLTAAIEAISNDEDLRIALGTTE"
     gene            complement(1778..2545)
                     /locus_tag="O6Y56_001977"
     CDS             complement(1778..2545)
                     /locus_tag="O6Y56_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575224.1"
                     /translation="MLSKQSQDFLEKLRVELLFRGKTEEEVEELLEELEDHLTMAEKN
                     NEDTSSIINTPIKSMADQLSPEISLTTGLYKYITLYFAFALAVIIIPMFLDLGTFDVT
                     IAFLLYIASIVILGVVIGMLILRNTLVRFGDQKITYVINVTYGIIVFLWMILGGLIIK
                     KYPIYSFFELSDKQSFIIGITFLILVIGTCILIKQKIYALIVLVISLPSLIARIASIF
                     SKEPDTFNLVSVSILIILNIAFIIYTFVNFRKLKKED"
     gene            complement(2535..2873)
                     /locus_tag="O6Y56_001978"
     CDS             complement(2535..2873)
                     /locus_tag="O6Y56_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HDB5575225.1"
                     /translation="MSVSNQIMKGLLDGAILGLIAQGETYGYEIMTKLKNQEFPEISE
                     GSIYPVLMRLNKKGYVDTTIKKSSNGGPRRKYYTITESGLKELKVFKSKWQALNKGMI
                     NLFGGENDVK"
     gene            3039..3503
                     /gene="bstA"
                     /locus_tag="O6Y56_001979"
     CDS             3039..3503
                     /gene="bstA"
                     /locus_tag="O6Y56_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol transferase BstA"
                     /protein_id="HDB5575226.1"
                     /translation="MTTKTVFDVIEMGLGYLVNVYDTWKVEKVLDDYHKPFSNTIHWQ
                     FGHVLTIFESALAVAGKENIDLNIYRPLFGNGSSPDEWKDEIPSIGTILEGLQTLPER
                     ARNLTEDDLAIELKQPIVGCNNLEELLVLNAIHIPLHAGKIEEMSRILKNLK"
     gene            3742..5160
                     /locus_tag="O6Y56_001980"
     CDS             3742..5160
                     /locus_tag="O6Y56_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDB5575227.1"
                     /translation="MENTVKYRKFILPIVVGLLIWALTPFKPDAVDPTAWYMFAIFVA
                     TIIACITQPMPIGAVSIIGFTIMVLVGIVDMKTAVAGFGNNSIWLIAMAFFISRGFVK
                     TGLGRRIALHFVKLFGKKTLGLAYSIVGVDLILAPATPSNTARAGGIMFPIIKSLSES
                     FGSKPKDESSRKMGAFLVFTEFQGNLITAAMFLTAMAGNPLAQNLASSTSNVHITWMN
                     WFLAALVPGLVSLIVVPFIIYKIYPPTVKETPNAKSWAENELATMGKIALAEKFMIGI
                     FVIALTLWIVGSFIHIDATLTAFIALALLLLTGVLTWQDILNETGAWNTLVWFSVLVL
                     MADQLNKLGFIPWLSKSIATSLGGLSWPIVLVILILFYFYSHYLFASSTAHISAMYAA
                     LLGVAIAAGAPPLFSALMLGFFGNLLASTTHYSSGPAPILFSSGYVTQKRWWTMNLIL
                     GFVYFIIWIGLGSLWMKVIGIF"
     gene            complement(5571..6479)
                     /gene="rarD"
                     /locus_tag="O6Y56_001981"
     CDS             complement(5571..6479)
                     /gene="rarD"
                     /locus_tag="O6Y56_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDB5575228.1"
                     /translation="MNTEYKKGIFLALSAYILWGILPIYWQFVDEIGAFEILAFRIIF
                     SAIFMIFILAVGQKQRNAFQRDMNQLLAKPIQLLAIVVAGYVITLNWGTFIWAVTNGH
                     VLQTSLGYYINPLVSILLALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSII
                     LALSFGTYGLLKKVVHIDAISSITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWL
                     LFSGAITAIPLILFSAGAKRIPLSLIGFIQYVGPTIMFVLGIFVFKEPFSLDQLITFI
                     FIWTGIVLYSLSQYIKLKKHPVAKTL"
     gene            6701..7276
                     /locus_tag="O6Y56_001982"
     CDS             6701..7276
                     /locus_tag="O6Y56_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDB5575229.1"
                     /translation="MTLPKIGKPATRALNSQGIYTLEAVSQYTKSSLMEMHGVGPKAI
                     SILEQALFQHQLHFKTEVHSSLPFLLTGDVSCNHAPKRQQMIDFIVATAALDIELLRS
                     LVTTEFIWSVPGRFDIYGPQILIQELSNHYNQVASLNIHSSITHGCLGSMHGIEILKT
                     GKEIHFAHFFEFENHKKDAKLSKVTSYIVVY"
     gene            7441..8457
                     /locus_tag="O6Y56_001983"
     CDS             7441..8457
                     /locus_tag="O6Y56_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HoxN/HupN/NixA family nickel/cobalt transporter"
                     /protein_id="HDB5575230.1"
                     /translation="MTVFKNERLSWLPYIAIVILLHVIGFSFLWIAGKDHHILFGMGI
                     LAYTLGLRHAFDADHIAAIDNTVRKLLQQRKDPSGVGFYFSIGHSSVVFLMAVFLGVS
                     VKWAKDELPHFQDIGGTIGTLVSGFFLVLIGVLNLIILISLINLFAKLRREHIEEAEV
                     DALLESRGFVSRFVGPYFKLITRSWHVLPLGFLFGLGFDTASEITLLALSSGASQQAI
                     SFIGILSLPILFASGMSLLDTLDGVVMKYAYNWAFFNPIRKIYYNITITTISVIAALV
                     IGMIELLQILADKLDLHGAFWAFISSIEFDYLGYILVALFLITWLISSLIWKFGRIEH
                     KWSK"
     gene            8700..9506
                     /locus_tag="O6Y56_001984"
     CDS             8700..9506
                     /locus_tag="O6Y56_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001017406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylamine N-acetyltransferase"
                     /protein_id="HDB5575231.1"
                     /translation="MNIAKLEDYLQIDSSRYNRPSIEALNYYATRFMLTIPFENIDVQ
                     NGKPISINIDALFNKIVRDKRGGFCYELNTFFKTYLQQKGFNPELMSATIHTPGGGRS
                     LNGSHASLVVSINDVFYVTDVGFGDLPLHAIPITSSEHTQPITDISGTFRAIFNNEDK
                     DIFYVQKFENDNWHTKYEAEFKAKCIADFDKNIEYNQTHPDSIFVQHLLITMPQSFGR
                     ATMSENHLTLTKDGTPEKLAITKDNYQQFLKTFFGLDVTINRIENSESQS"
     gene            9666..9806
                     /locus_tag="O6Y56_001985"
     CDS             9666..9806
                     /locus_tag="O6Y56_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000047373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575232.1"
                     /translation="MSKTDAQEILISKEKVFLYRHSAQTQQKGCGTNFMPHPSFEPLH
                     FT"
     gene            complement(9803..10315)
                     /locus_tag="O6Y56_001986"
     CDS             complement(9803..10315)
                     /locus_tag="O6Y56_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeD family acid-resistance protein"
                     /protein_id="HDB5575233.1"
                     /translation="MEKGNQGIKWSSLIMGVLLLMLAVVIFTFPIENFYAITWLIGLF
                     VLINGVIQIVYRRKAKALVGGNQNWILFMGIVDILFGLIVIFNVGASSAFFIYMFAFW
                     FIFSSIAGLFTFSGSGSLKLISVIFNLLGIVFGVILLFNPLMGIVFISTMIAIAFVFV
                     GVIYVVDALA"
     gene            10605..11363
                     /gene="vraD"
                     /locus_tag="O6Y56_001987"
     CDS             10605..11363
                     /gene="vraD"
                     /locus_tag="O6Y56_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide resistance ABC transporter ATP-binding
                     subunit VraD"
                     /protein_id="HDB5575234.1"
                     /translation="MTILSVQHVSKTYGKKHTFQALKDINFDIQKGEFVAIMGPSGSG
                     KTTLLNVLSSIDQISSGSVIANGQELNKLNQKALAKFRKESLGFIFQDYSILPTLTVK
                     ENIMLPLSVQKMSKATMEENYKAITTALGIYDLGNKYTSELSGGQQQRTAAARAFVHK
                     PQIIFADEPTGALDSKSANDLLQRLEEMNKSFDTTIVMVTHDPVAASFAERVIMLKDG
                     QIHTQLYQEGRSKQAFYEDIVHLQSVLGGVSNDI"
     gene            11353..13233
                     /gene="vraE"
                     /locus_tag="O6Y56_001988"
     CDS             11353..13233
                     /gene="vraE"
                     /locus_tag="O6Y56_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide resistance ABC transporter permease
                     subunit VraE"
                     /protein_id="HDB5575235.1"
                     /translation="MTFNHIVLKNLRQNLKHYAMYLFSLFFSIVLYFSFTTLQFTKGV
                     NNDDSMAIIKKGALVGSIFLFIIIVIFLMYANHLFVKRRTREFALFQLIGLTRQNILK
                     MLALEQMIVFLITGVVGVLCGIAGAQLLLSIVSKLMSLSINLSIHFEPMALVLTILML
                     IIAYILILFQSSLFLKRRSILSMMKDSIKTDVTTAKVTTAEVISGVLGIAMIALGYYM
                     ATEMFGTFKALTMAMTSPFIILFLTVVGAYLFFRSSVSLIFKTLKKSKNGRVSITDVV
                     FTSSIMYRMKKNAMSLTIIAIISAVTVTVLCFAALSKSNTDQTLISMAPNEFNVVASQ
                     DAQQFESKLSQQHITFTKNYYETITVNNVKDQVITLENGSDSGRTNSILSANTKLTGN
                     NAIITNTKSLPNIINIHLNKDLVVKGTKNETFRVTQEDKGKVYPLNLSFNSPVVEVSP
                     EKYQQLKTQNNVHTFYGYDIKQTSQKEKAQAIAKQFGDKVITYDDMKKEVDATNGILI
                     FVTSFLGLAFLVAAGCIIYIKQMDETEDELSNFRILKRIGFTHTDMLKGLLLKITFNF
                     GLPLLIAILHAVFAAIAFMKLMGNISFMPVIIVIIVYTLIYIVFALIAFVHSNKLIKK
                     TI"
BASE COUNT         4461 a         2241 c         2126 g         4469 t
ORIGIN      
        1 cacaccattt aaaaggtaga attcttgttt ctacagaagg tattaacggc acattatctg
       61 gtacaaaaga agaaaccgaa caatatatgg cacatatgca tgccgatgaa cgattcaaag
      121 atatggtgtt taaaattgat gaagctgaag gacatgcttt taagaaaatg catgtacgtc
      181 ctcgaaaaga gattgttgct ttagatttag aagaagacgt cgatccaaga cacacaactg
      241 gccaatattt atcacctgta gaatttagaa aagctcttga agatgatgac acagtcatta
      301 ttgatgcacg taatgattat gaatttgatt taggtcattt ccgaggtgca attcgtccaa
      361 atatcacgcg ctttagagat ttgcctgact ggattaaaga gaataaagcg ttatttgcag
      421 ataaaaaagt ggttacgtac tgtactggtg gcattcgatg tgaaaaattt tctggatggc
      481 ttttaaaaga aggtttcgaa gatgtagcac aacttcatgg cggtatagct acatatggta
      541 aagatcctga aacaaaaggt gaatattggg acggtaaaat gtacgtattt gatgaccgca
      601 tcagtgttaa tatcaaccaa gttgaaaaaa caattattgg taaggattgg tttgatggca
      661 aaccatgtga acgttatatt aattgcgcta accctgaatg taataagcaa atattagttt
      721 cagaagaaaa tgaagccaaa tatttaggtg catgctctta tgaatgtgct aaacatgagc
      781 gtaatcgtta tattcaagca aacaatatta gtgataacga gtggcaacat cgtttaacaa
      841 actttgatga tttacatcaa catgcttagt tttaattaaa tacctatcaa aacacgcttt
      901 gaaaatccga tttataaagg tttttcaggg ctgtttttta tgcgcataca taacctgata
      961 tgtttttaat tatgcgcatg ttatactaaa ttaaatttta atactgcggg gtgtcttaaa
     1021 atgcacattt tagtaacagg atttgcgcct tttgacaatc aaaatattaa tccctcatgg
     1081 gaagctgtgt ctctactaga aaatattatt ggcacacata caatcgataa attaaaacta
     1141 ccaacctctt ttaagaaagt agatactatt ataaataaaa agttggcatc taatcattat
     1201 gatgttgtac tagctatagg acaagctggt ggtagaaatg ccattacacc agaacgtgtc
     1261 gccattaata ttgatgatgc acgtattcca gataatgatg attttcaacc tattgatcaa
     1321 gccattcatt tagacggtgc gccagcttat ttttcaaatt taccagttaa agcaatgact
     1381 caaagtatta ttaaccaagg acttccagga gcactttcaa atagtgcagg tacgtatgta
     1441 tgtaatcact tgctttatca cttaggctat ttacaagata agcattaccc tcaccttcga
     1501 ttcggattta ttcatgtgcc atacatacca gagcagattg gtggtaaacc cgatacacca
     1561 tctataccat tagaaaagat agttgcaggt ttgactgcag ccattgaagc tatttctaat
     1621 gatgaggatt tacgtatagc tctaggcaca acggaatagt tataagagta acaacaaaag
     1681 caccctaatt tgttagttta agtctaactt tagggtgctt ttggatgatt ggtatacagt
     1741 tttactataa tgatgtattt tagctaaacg acattgttta gtcttctttt tttaacttcc
     1801 taaaatttac aaatgtataa ataataaatg ctatatttag aatgatgagt atacttactg
     1861 aaactaaatt aaaagtgtct ggttctttac taaagataga tgctatcctt gctatcaaac
     1921 ttggcaatga aattaccaac acgataagcg cataaatttt ctgtttaatt aaaatacaag
     1981 ttccaataac taatattaaa aatgttatcc caataatgaa actctgtttg tcacttaact
     2041 caaagaaact atagatagga tattttttaa taatcaagcc acctaaaatc atccataaaa
     2101 atacgataat tccataagtc acatttataa catatgttat tttttggtca ccaaatcgga
     2161 ctaatgtatt gcgtagaatc agcataccaa tgacaacacc taaaataacg atactagcta
     2221 tatacaataa aaatgcaatt gtcacatcga atgtacccaa atctaaaaac ataggaatta
     2281 taatgactgc taaagcaaaa gcgaagtaca acgtaatata tttatataaa ccggtagtaa
     2341 gacttatctc aggtgataac tgatcagcca ttgacttaat cggtgtatta ataattgaac
     2401 ttgtatcttc gttatttttt tcagccatag ttaaatgatc ttcgagctct tccaatagtt
     2461 cttctacttc ttcttcagtt ttacctctaa ataacaattc aacacgtaat ttttccaaaa
     2521 aatcttgaga ctgtttactt aacatcgttt tcccctccaa acaagttaat cattccttta
     2581 ttcaaagctt gccattttga tttaaatact tttaattcct ttaaacctga ctcggtaatc
     2641 gtatagtact ttcgccttgg gccaccatta ctagattttt ttatagtcgt atcaacgtat
     2701 ccttttttgt ttaaacgcat taaaactgga taaatactac cttcacttat ctctggaaac
     2761 tcttgattct taagtttcgt cataatttca tatccatatg tttcgccttg ggcaatgaga
     2821 cctaatattg ccccatctaa gagacctttc ataatctgat ttgacactga cattttcatc
     2881 acctactatc ttacattata agatagtaca ttgaggactt ttcgtcaact atcttatatt
     2941 ataagttagt catgatttac attccttaaa tgactaacaa ctttgttaat agggtaatac
     3001 ttacggaagt atgttttatt tatggggagg aattaataat gactacaaaa acggtatttg
     3061 atgtcattga aatgggttta ggatatttag taaatgtgta tgatacttgg aaagttgaaa
     3121 aggtacttga tgattatcat aagccttttt ctaataccat tcattggcaa tttgggcatg
     3181 tattaacaat ttttgaatca gccttagctg ttgctggtaa agagaatatt gatttaaata
     3241 tatatagacc tttattcgga aatggttcgt ctccagatga atggaaggac gaaataccga
     3301 gtattggaac gattttagaa ggtcttcaaa cattacctga acgtgcacga aatctaactg
     3361 aagatgattt agcaattgaa ttgaaacagc caattgtcgg ttgtaataac ttagaagagt
     3421 tattagtatt aaatgccatt cacatcccac ttcatgctgg taaaattgaa gaaatgtctc
     3481 gtatattaaa aaatttaaaa taaatatgtg cttattaacc gttaacaata cgttaacgga
     3541 tttttttatt tgtttaaaag gccactttat taaatttaat aaacaccaat gatttctctt
     3601 cttcaccgat tctcgaaaaa taattatatt aatgatttcg ttaattgaat tttatattta
     3661 attattactg tacatctttt gaagttagct ttattcttaa attgaaatat gtataaaaca
     3721 tagaaagaag gacgttttaa catggaaaac acggttaaat atcgtaagtt tatactccct
     3781 atcgttgtag gtctccttat ttgggcactt acacctttta aaccggatgc tgtggatcca
     3841 acagcatggt atatgttcgc aatattcgtc gcgacaatca ttgcttgtat tacacaaccg
     3901 atgccaattg gagctgtctc tataattgga tttacaatca tggtactcgt tggcattgtt
     3961 gacatgaaaa cggctgtcgc tggttttggt aataatagta tatggttaat tgctatggca
     4021 tttttcattt cgagaggatt tgtgaaaaca ggtcttggta gacgtatcgc acttcatttc
     4081 gtcaaattat ttggtaaaaa aacattaggc ttagcatatt ctatcgtcgg tgtagattta
     4141 attctagcgc ctgctacacc aagtaatacc gcgcgtgctg gtggaatcat gttcccaatt
     4201 atcaaatcac tttctgaatc atttggttcg aaaccaaaag acgaatcatc acgcaaaatg
     4261 ggtgcatttc ttgttttcac agaattccaa ggtaacttaa ttactgctgc tatgttttta
     4321 actgcaatgg ccggtaaccc ccttgcacaa aatttagcat ctagcacatc taatgttcac
     4381 attacatgga tgaattggtt cctagctgct ttagttcctg gacttgtttc cttaattgtt
     4441 gtacctttta ttatttataa aatttatcca ccaactgtta aagaaacacc aaatgctaag
     4501 agttgggctg aaaatgaatt agcgactatg ggtaaaatcg ctttagctga aaaatttatg
     4561 attggtattt ttgtcattgc tctaacacta tggattgtcg gaagtttcat tcatattgat
     4621 gcaactttaa cggcctttat tgcgctagca ttgttattat tgacaggcgt cttaacatgg
     4681 caagacattt taaacgaaac aggtgcttgg aacacattag tatggttctc agtgttagtg
     4741 ttaatggccg accaattaaa caagcttgga tttattcctt ggttaagtaa atccattgct
     4801 acaagtcttg gtggcttaag ttggcctata gtactggtca ttttaatatt gttctacttc
     4861 tattcacatt acttatttgc aagttctaca gcacatatca gtgcgatgta tgcagcatta
     4921 ctaggcgttg ccatcgcagc cggtgcacca ccattattca gtgcattaat gttaggtttc
     4981 tttggtaacc ttttagcttc aacaacacac tatagtagtg gtccagcgcc gattctattc
     5041 tcttcaggtt acgtgactca aaaacgttgg tggacaatga acttgatctt aggtttcgtc
     5101 tactttatta tctggattgg tttaggatca ctttggatga aagtaattgg tatattttaa
     5161 aatatttaaa ttagcgctcg aatctcattg atttgggcgc tttttaattt gtatttaaaa
     5221 tcaatctttg ctaaatcaag actccctttt taaaatacgt ttatccttta aatcattgcg
     5281 tacttcactg aaaatttgta taaagattta agtcattacg taacatcaca taaaatacat
     5341 ttctatatta atccgcttcg ttgattaaca ttacttatgt atcataaatc atcaaacaaa
     5401 aaacactttc gcttaaattc atttaattat gaattcaaag aaagtgcttt attttatatt
     5461 taatgtttca aatttatacg gctgtcacta ttactgcaca catacctcag tctcacctta
     5521 acatgacaca aaggaagttg aaaacacgta taattatctc tcctcgtatt ttatagggtt
     5581 tttgcgactg gatgtttctt caatttaatg tattgagaaa gactatataa cacaatacct
     5641 gtccaaataa atataaacgt aattaattga tctaaactaa aaggctcttt gaaaacaaat
     5701 atgccgagta caaacattat tgttggtcca acgtattgaa taaatcctat tagtgaaagt
     5761 ggaatacgtt ttgccccggc tgagaatagg attagtggta ttgccgtaat agcaccagaa
     5821 aataacaacc aaaatgatga catgttcaat ccaaatgaca tctgatgttg ctgccataaa
     5881 taaataacgt atattagtcc agcaggtgcg gtaacaatac attcaatcgt aatactgctg
     5941 atggcatcaa tatgtactac ttttttcaat aatccgtatg taccaaagga taacgctaat
     6001 ataatagaga cgattgggaa ttctccaatc ttcagtgtca tatatagtac accaatgaat
     6061 gcgaataata tggctaacca ttcaaattta ttgaatcttt cttttaaaaa gataagtgcg
     6121 agtaaaatac tgacaagtgg atttatataa taacctaaac ttgtttgtag gacgtgtccg
     6181 ttcgttacag cccaaataaa tgtaccccaa ttcaaggtga tcacataacc cgctacgaca
     6241 attgctagta attgaatggg cttggctaac aattgattca tatctcgttg aaatgcattg
     6301 cgttgttttt gtccaaccgc gagtatgaaa atcatgaata ttgctgaaaa tataatacga
     6361 aaggctaaaa tttcaaatgc gcctatttca tcaacgaatt gccaatatat aggtagtatt
     6421 ccccacagaa tgtatgcact gagtgctaaa aatatacctt ttttatattc tgtattcact
     6481 tacatacctc cttactctcc caaattttta acatgttacg ctcacttagt taagctaata
     6541 taacgatttt actaataata tttcgataaa gatatcattt tgtttatatt tcccacattt
     6601 attcaccaac cactaaacaa tattaatttt ataaataatt ctgtacaaat cagggtatat
     6661 tgccagaaag actaccatac aacataaagg atggatacaa atgactttac ctaaaattgg
     6721 aaagcctgca acacgcgcgt taaattcaca aggtatatac acattagaag cagtatcaca
     6781 atatacgaag tcatctctaa tggagatgca tggcgttggt cctaaagcta tatcaatatt
     6841 ggaacaagct ttatttcagc accaactaca ttttaaaacg gaagttcatt catcattacc
     6901 ttttttatta acaggagatg tgtcatgcaa tcatgcgcct aaacgtcaac aaatgataga
     6961 ttttatagtt gctacagcag cattagatat tgaattatta cgttcactgg ttacaacaga
     7021 atttatttgg tctgtccctg gacgctttga catatacgga cctcaaatat taattcaaga
     7081 actatctaat cattacaatc aggttgctag tctcaatatc cactccagca tcacacatgg
     7141 gtgcttaggt tccatgcatg gtattgaaat attaaaaact ggtaaagaga ttcattttgc
     7201 tcattttttt gaatttgaaa atcataaaaa ggatgccaag ttaagcaaag tgacatctta
     7261 cattgttgtt tattaatgta tcaaattata tatatcgcaa aaaattcttt tgcggtcaca
     7321 tgtatatttt atataacaaa taattttgca taacattttt gtcatatgaa cacttattac
     7381 tagagtgcac attgaacata cagtatgatt aaatatcatg ttatgaaaga aggatatatt
     7441 ttgactgttt ttaaaaatga gcgcttaagc tggttaccat acatagctat tgtcattttg
     7501 ttacacgtta ttgggtttag ttttttatgg attgctggaa aagaccatca tatcttattt
     7561 ggtatgggga ttcttgcata tacattaggt ttacgtcatg catttgatgc tgatcatatc
     7621 gccgcgatag ataatacggt tcgcaaatta ttacagcaac gcaaagatcc atctggtgtt
     7681 ggtttctact tttcaattgg acattcatct gtcgtatttt taatggctgt ttttttaggg
     7741 gtatctgtaa aatgggctaa agatgaatta ccacatttcc aagatattgg tggaacaatt
     7801 ggtacactag tttcaggttt ctttttagtg cttatcggtg tgttgaatct aattatttta
     7861 atctctttaa ttaacttgtt cgctaaatta cgacgtgaac acattgaaga agctgaagtc
     7921 gatgcattac ttgaatctag aggatttgtt tctcgatttg taggacctta tttcaaatta
     7981 atcacgcgta gttggcacgt attgccactt ggctttttat ttggacttgg ttttgataca
     8041 gctagtgaaa ttacgttact tgctctttct tcaggcgcat cacaacaagc catttcattt
     8101 atcggaatct tatctttacc aattttattc gcatcaggta tgagtttgtt ggatacttta
     8161 gatggtgttg taatgaaata tgcctataat tgggcattct tcaatcctat tcgcaaaatc
     8221 tattacaata taacgattac tacgatatcc gtcatagctg cattagtgat tgggatgatt
     8281 gaattgctgc aaattcttgc tgataagcta gacttacacg gtgcattttg ggcatttatt
     8341 agttcaatcg aatttgatta tttaggctat attctagtcg ctttattttt aataacttgg
     8401 cttatttcaa gcttaatttg gaagtttggt cgcatagaac acaaatggtc taaataaagt
     8461 aacttgtctt gcaactacct ttgtattgtt acatttttag acatcctgca cacttcttcc
     8521 attatgctac actctcagta gtcatcttta aatcgtttct tttagagatg acttcatttt
     8581 gatagcgtat ttttctattt aaaatgtggt tatccaaaat tcaatacttt cgaatttaaa
     8641 gtttcagcat ttctgtttaa aatttaacta taatctttaa tacaggaggc gttatgctta
     8701 tgaatattgc gaagttagag gattatttac aaattgattc atctcgttat aatcgaccga
     8761 gtattgaagc attaaattat tatgcaactc gttttatgtt aactatacct tttgaaaata
     8821 ttgatgttca aaatggtaag ccgatatcta taaatatcga tgcacttttt aataaaattg
     8881 ttcgtgataa acgtggtggt ttttgttatg agttaaatac atttttcaaa acctatttac
     8941 aacaaaaagg atttaatccc gaattaatgt cagctactat tcatacaccc ggtggcggtc
     9001 gcagtctgaa cggttcacat gcttcacttg ttgtttctat aaatgatgta ttctatgtaa
     9061 ctgatgttgg ctttggagac ttacctctac acgccattcc tattacttcg tcagagcata
     9121 cacaaccgat tactgacatc agtggtacgt ttcgtgctat ctttaacaac gaagacaagg
     9181 atattttcta tgttcaaaaa ttcgaaaatg ataattggca tacaaaatat gaagctgaat
     9241 ttaaagctaa atgtattgca gattttgata aaaatattga atataatcaa acgcatccag
     9301 attcaatatt tgtacagcat ttattaatta caatgccaca atcgtttggc cgtgctacaa
     9361 tgtctgaaaa tcatttaact ttgacaaaag atggaacgcc agaaaagtta gctatcacta
     9421 aagataacta tcaacaattt ttgaaaacat tttttggcct agatgttact atcaatcgaa
     9481 ttgaaaacag tgaaagtcaa tcataagcat acggacgtga cttactttaa tgtaggtaac
     9541 gtccttttta aatacacatg ttcgtcagag aatgggacag aaatgataca gcgccactaa
     9601 taattgatga tttagtggtt cttacacatt agccaaagct cgtgtgtact tataaatagg
     9661 catgcatgag taaaactgat gcacaagaaa tactaatttc taaagaaaaa gtatttcttt
     9721 atcgacactc tgcgcaaaca caacaaaaag gatgtggcac aaacttcatg ccacaccctt
     9781 cttttgaacc gcttcatttt acttaagcaa gtgcatctac aacataaatg acacctacga
     9841 atacaaatgc aatagcaatc atcgtcgaaa taaagacgat acccattaat ggattaaata
     9901 ataaaatgac accgaaaaca atacctaata aattaaaaat cactgaaatt agttttaagc
     9961 taccactacc cgaaaacgta aataatccag cgatagaact aaaaataaac caaaaagcaa
    10021 acatgtagat aaaaaatgcc gagctagcac caacattaaa aatgacaata agaccaaaga
    10081 gaatatctac aatccccata aacagaatcc aattttggtt accaccaact aaagctttgg
    10141 cttttctacg ataaacaatt tgaatcacac cattaatcaa tacaaataat ccaattaacc
    10201 atgtgattgc ataaaagttt tcaattggga acgtaaaaat aacaactgct aacattaata
    10261 acagcacacc cataatcaaa ctagaccatt taattccttg atttcctttt tccataacaa
    10321 tcatttcctt tcaaacaacg ccttctttat attttcatta gtgccactat tgttcattga
    10381 ttaaattccc tcatcttaac ttatagaaac atttcctcag tgcaaatact gcgatgctca
    10441 aattagttga attgctttcc aataatccaa attcacccga gaaaatcacg atatattaat
    10501 atctttcaac tatgtaagat tcaaacattg aattgtaagt ttagataaag gctactgttc
    10561 tacttattat ttaaaatgaa attaaataca aaaggagtga tactatgacg atattatcag
    10621 tgcaacatgt ttcaaaaaca tacggtaaaa agcacacatt tcaagcactt aaagatatta
    10681 actttgacat acaaaaaggc gaattcgttg cgattatggg gccttctgga tcaggtaaga
    10741 caaccttatt aaatgtacta agttcaattg accaaatttc tagcggtagc gtgattgcta
    10801 acggacaaga gcttaataaa cttaatcaaa aagcacttgc caaattccgt aaagaatcat
    10861 taggtttcat cttccaagat tacagtattc tgccgacatt aaccgttaaa gaaaacatta
    10921 tgttaccttt atctgttcaa aaaatgtcga aggcaacaat ggaagaaaat tataaagcga
    10981 taacgacagc attaggtatt tatgacctag gaaataaata cactagcgaa ttatctggtg
    11041 gtcaacaaca aagaactgca gcagcgagag catttgttca caaaccacaa atcatatttg
    11101 cagatgagcc aacaggcgca ctcgactcga aaagtgcaaa tgacctatta caacgtttgg
    11161 aagaaatgaa taaatcgttt gatacaacta ttgtcatggt tacacatgat ccggttgcag
    11221 caagttttgc agaacgtgtc atcatgctaa aagatggcca aattcataca caactttatc
    11281 aggaaggacg ttctaaacag gccttttatg aagacattgt acatcttcaa tcagtattag
    11341 gtggtgtctc aaatgacatt taaccatatc gttttaaaaa acttacgtca aaacttaaaa
    11401 cattatgcaa tgtatttatt ttcattattt tttagcatcg tcttatattt cagttttaca
    11461 accttacagt ttactaaagg tgtaaataat gacgactcga tggccatcat taagaaaggt
    11521 gctttagtcg gatcaatatt tttatttatc attattgtca tctttttaat gtatgccaat
    11581 catttattcg tgaaacgccg tacacgtgaa tttgcgctat ttcagttgat tggtttaaca
    11641 cgacaaaaca ttttgaaaat gttagcactt gaacaaatga ttgtattttt aatcacaggt
    11701 gttgtcggtg tattatgtgg cattgcaggt gcacaattat tgctttccat tgtatctaaa
    11761 ttgatgtcgt tatcgattaa cttatcgata catttcgaac ctatggccct tgttttaact
    11821 attttaatgc taattattgc gtatatactg attttatttc aaagcagttt gtttttaaaa
    11881 agacgcagta tcttatcaat gatgaaagac tcaattaaga ctgatgttac aactgcgaaa
    11941 gtaacgactg cagaggttat ttcaggcgta ttaggtattg ctatgattgc actaggctat
    12001 tatatggcga cagaaatgtt tggtacgttc aaagcactaa ctatggctat gacatcaccg
    12061 tttatcattt tatttttaac ggttgtaggc gcctatttat tcttcagaag ttccgtgtca
    12121 ctgattttta aaactttgaa aaaatctaaa aatggacgcg tatctattac agatgttgta
    12181 tttacatcgt ctattatgta ccgaatgaag aaaaatgcca tgtctttaac tatcattgca
    12241 attatttctg cagttacagt aactgtattg tgttttgcgg cattatctaa atcaaataca
    12301 gatcaaaccc ttatatctat ggcaccaaat gaatttaacg tggtcgcctc tcaagatgcg
    12361 caacaatttg aatctaaact aagccaacaa catattacat ttactaaaaa ttattatgaa
    12421 actatcactg taaataatgt taaagatcag gttattactt tggaaaatgg tagtgattca
    12481 ggtcgcacga attctatttt aagtgcaaat acaaagttaa ctggtaacaa tgccatcatt
    12541 acaaatacaa aatcacttcc taacattatt aatatccatt taaacaaaga tttagtagta
    12601 aaaggtacta agaatgaaac tttccgtgtt actcaagaag acaaaggtaa ggtttatcct
    12661 ttaaatctaa gcttcaactc acctgtcgtc gaagtaagtc ctgaaaagta tcagcagttg
    12721 aaaacacaaa ataacgttca tactttttat gggtatgata ttaaacaaac atcacaaaag
    12781 gaaaaagctc aagcaattgc aaaacagttt ggagacaaag tcatcacgta tgatgacatg
    12841 aaaaaagagg tcgatgctac taacggtatt ctaatatttg ttacatcatt tttaggatta
    12901 gcatttttag tagcagctgg atgtattatt tatattaaac aaatggatga aactgaggat
    12961 gaactaagta acttcagaat attaaaacgc ataggcttta cgcatacaga tatgcttaag
    13021 ggattattat taaaaattac tttcaacttc ggtttaccat tattgattgc tatattacat
    13081 gcagtattcg ccgccatagc atttatgaaa ttgatgggta atatatcctt catgccggtt
    13141 attatagtaa tcattgtata cacactcatt tacattgttt ttgctttaat cgcttttgta
    13201 cattcaaaca aattgattaa gaaaaccatt taacacttgt gattaaaaga tgcttcattg
    13261 agattttgat tttaagcaat gcagtataac tattaat
//
LOCUS       DALMNS010000083        13235 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.083, whole genome shotgun sequence.
ACCESSION   DALMNS010000083 DALMNS010000000
VERSION     DALMNS010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 13235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13235
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.083"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(47..1987)
                     /gene="ltaS"
                     /locus_tag="O6Y56_001989"
     CDS             complement(47..1987)
                     /gene="ltaS"
                     /locus_tag="O6Y56_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyglycerol-phosphate lipoteichoic acid
                     synthase LtaS"
                     /protein_id="HDB5575236.1"
                     /translation="MSSQKKKISLFAFFLLTVITITLKTYFSYYVDFSLGVKGLVQNL
                     ILLMNPYSLVALVLSVFLFFKGKKAFWFMFIGGFLLTFLLYANVVYFRFFSDFLTFST
                     LNQVGNVESMGGAVSASFKWYDFVYFIDTLVYLFILIFKTKWLDTKAFSKKFVPVVMA
                     ASVALFFLNLAFAETDRPELLTRTFDHKYLVKYLGPYNFTVYDGVKTIENNQQKALAS
                     EDDLTKVLNYTKQRQTEPNPEYYGVAKKKNIIKIHLESFQTFLINKKVNGKEVTPFLN
                     KLSSGKEQFTYFPNFFHQTGQGKTSDSEFTMDNSLYGLPQGSAFSLKGDNTYQSLPAI
                     LDQKQGYKSDVMHGDYKTFWNRDQVYKHFGIDKFYDATYYDMSDKNVVNLGLKDKIFF
                     KDSANYQAKMKSPFYSHLITLTNHYPFTLDEKDATIEKSNTGDATVDGYIQTARYLDE
                     ALEEYINDLKKKGLYDNSVIMIYGDHYGISENHNNAMEKLLGEKITPAKFTDLNRTGF
                     WIKIPGKSGGINNEYAGQVDVMPTILHLAGIDTKNYLMFGTDLFSKGHNQVVPFRNGD
                     FITKDYKYVNGKIYSNKNNELITTQPADFEKNKKQVEKDLEMSDNVLNGDLFRFYKNP
                     DFKKVNPSKYKYETGPKANSKK"
     gene            complement(2461..3465)
                     /locus_tag="O6Y56_001990"
     CDS             complement(2461..3465)
                     /locus_tag="O6Y56_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HDB5575237.1"
                     /translation="MSIIIEKSGLFSSFQDFGRRGYEHDGVIPCGALDTLAHEIANRL
                     VANDKNEATLEMTNKMATIRFTEPTLIALAGGNVKAYTEHMTISPYKLYLLDKGDVLK
                     FRETSYTSRVYLAVGGGFELDAWLGSNSTDFNVKIGGFKGRTLQDGDEIKLKRDYTAR
                     HHKLFENLAHTKQTDWGIDGYALSFNYMSDVFHVVKNKGTEDFKEDAIQRFVKHDYKV
                     TSKANRMGMMLEGEKIKAFYEDMPPYQTVKKGTIQIKRDGTPIILLNDHYTLGSYPQI
                     GTIASYHLTKLAQKPQGSRLKFQFIDILTAEKNLVKYSNWLNQLFHGIEYRMQLEMMK
                     "
     gene            complement(3449..4159)
                     /locus_tag="O6Y56_001991"
     CDS             complement(3449..4159)
                     /locus_tag="O6Y56_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="allophanate hydrolase subunit 1"
                     /protein_id="HDB5575238.1"
                     /translation="MKIYSQGDQAIVVAIEKEVSKSLTEDLLTLRSYLIEQNYPFIIE
                     IVPSESDMMIVYDARDMIKHHNIQSPFLYMKALIESIHLNIKHDFNQQDLIEIPIVYG
                     SKYGPDLESLLKHYKIKLETFIELHSKAQYFVSMMGYSPGFPYLTGLNKKLYINHTSK
                     QKKFIPAGSVVLEGKKCGIVTTDTINDWLVIGYTPLSLFNPKESDFARLKLGDNIKFR
                     PINENELEVGAFKDVNHN"
     gene            complement(4256..4462)
                     /locus_tag="O6Y56_001992"
     CDS             complement(4256..4462)
                     /locus_tag="O6Y56_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575239.1"
                     /translation="MIIVYIALLLILVYVNYRLVNRLLSENRIYVVRLIATITTVISF
                     ILVYALIHELMPFVVRAMDLMYHQ"
     gene            complement(4528..5136)
                     /locus_tag="O6Y56_001993"
     CDS             complement(4528..5136)
                     /locus_tag="O6Y56_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HDB5575240.1"
                     /translation="MQLFETMKIDNGHIPRLTYHTNRIKCSSERLNFKFDEHAWRNEL
                     NDVTTKYHSGQYRLKIVLNAESEFETIVSSLPEKSSFTAKFQVLPKTVNPTFINNKTT
                     ERKHLAHNHETDLILLTSEDGKVLEFDIGNIVIEEDGKWYTPSYKDDFLKGCMRDYLI
                     DSDKLVEKDFNKTELIYKYHNNEIRLFLINSLREVADVHLCL"
     gene            complement(5136..6287)
                     /locus_tag="O6Y56_001994"
     CDS             complement(5136..6287)
                     /locus_tag="O6Y56_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HDB5575241.1"
                     /translation="MRIEYNYRYYLTENEYKQYHIQLKGFIKKYVATKLADVGEVIHF
                     AQAQQRQGRYVSLYLSYEAAKYFNHVMCTHSLAKDDIYAVAYSFEKAESINSTYEHQT
                     SYVSKHHFSFVESSEVMMTNIKRVQQAIVEGETYQVNYTARLTDNIYYPISTLYERLT
                     QFSNGNYTALLQTDEIQVASISPELFFQKGQFNNVDNVIISKPMKGTMPRGKTEAEDQ
                     QYYKTLQTSSKDRAENVMIVDLLRNDIGRISQSGSIKVYKLFFIEAYKTVFQMTSMVS
                     GTLKTNTDLTQILTSLFPCGSITGAPKLNTMKYIKQLESSPRGIYCGAIGLLLPTEDD
                     KMIFNIPIRTIEYKYGQAIYGVGAGITIDSKPKDEVNEFYAKTKILEML"
     gene            complement(6271..6864)
                     /locus_tag="O6Y56_001995"
     CDS             complement(6271..6864)
                     /locus_tag="O6Y56_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDB5575242.1"
                     /translation="MILVIDNNDSFTYNLIDYIKTQTKLTVQVVGIDNLLIEDIINMK
                     PKAIVISPGPGNPDDYPILNEVLEQFYQRVPILGVCLGFQCIVSYFGGNIIHGYHPVH
                     GHTTQLRHTNEGIFQGLPQNFNVMRYHSLIADGATFPNCLKITAKNDEAIIMAFEHIT
                     FPVFGVQYHPESILSEYGYRQVELFLSKVGDYCENRI"
     gene            7215..7883
                     /gene="queC"
                     /locus_tag="O6Y56_001996"
     CDS             7215..7883
                     /gene="queC"
                     /locus_tag="O6Y56_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDB5575243.1"
                     /translation="MESVLNNEKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQR
                     HDTEIEVAKQIAQDQGMKHHVLDMSLLSQLTPNALTQHDMEITNNEDGIPNTFVPARN
                     LLFLSFAGALAYQIGAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHT
                     PLMWLNKAETWKLSDELEVLDYIRTKTLTCYNGIIGDGCGECPACHLRQRGLNQYLES
                     KGAL"
     gene            7885..8304
                     /gene="queD"
                     /locus_tag="O6Y56_001997"
     CDS             7885..8304
                     /gene="queD"
                     /locus_tag="O6Y56_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HDB5575244.1"
                     /translation="MLQQIYPSTTHPYQFELNKDFNFSAAHHIPCEEAGICQNVHGHT
                     YFVNLTIVGDKLDDTGFLVNFSHLKKMIHGKFDHQLLNNLPAFKNKIPSTEIVAETIY
                     QIVKENLASLEHQPKCIQVFVRETPTSYVVFRPKEQV"
     gene            8308..9021
                     /gene="queE"
                     /locus_tag="O6Y56_001998"
     CDS             8308..9021
                     /gene="queE"
                     /locus_tag="O6Y56_001998"
                     /EC_number="4.3.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDB5575245.1"
                     /translation="MAKIPVLEIFGPTIQGEGRVIGRKTMFVRTAGCDYRCSWCDSAF
                     TWDGSAKSDIKLMTAEEIYDELKRIGGDLFNHVTISGGNPALIKGIQELVDLFQDKGI
                     FSALETQGSKFQPWMTQIDDLTISPKPPSSTMTPDLKKLDEVIAQCVPSSLNLKVVVF
                     DDKDYDFAKMIHHRYPDIPFYLQVGNPYLSDSVDNHTEKLLERYEQLVDLVMQSNDMN
                     HVYVLPQLHTLLWSNKKGV"
     gene            9120..9704
                     /locus_tag="O6Y56_001999"
     CDS             9120..9704
                     /locus_tag="O6Y56_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575246.1"
                     /translation="MIVYILINIAIVVLITGFNLYRHQMQHLSLSAMLLSITINAFIN
                     TFIIDKYNFITLCTITMFIIWTILQFYIDKKLKPVYITDQKFIAIILTIVVSLTQRVT
                     DFSSTQSIYMSIPFLAPAIFIIGGIMLFISTFNNLDETAENNNKIKKLMIKGLIIINI
                     SFIVMMVLTPYWYLYLIVYLIFLLFLLWQKVYKF"
     gene            9984..10424
                     /locus_tag="O6Y56_002000"
     CDS             9984..10424
                     /locus_tag="O6Y56_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DM13 domain-containing protein"
                     /protein_id="HDB5575247.1"
                     /translation="MNTKYFLAAGAVITTLALGACGNSNSQDQGNKTEQKTKSEDSNV
                     KTDKTKHLTGTFSSKNGETVEGKAEIKNGKLMLTNYKSSKGPDLYVYLTKNGDIKNGK
                     EIAMVDYDKEKQTFDLKNVDLSKYDEVTIYCKKAHVIFGGAKLK"
     gene            10766..11239
                     /locus_tag="O6Y56_002001"
     CDS             10766..11239
                     /locus_tag="O6Y56_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDB5575248.1"
                     /translation="MNKLLLLVTFIIRVGSGIVMLMQGYEKLTGGFTLKGLVPVIANN
                     TDSPEWYKWFFANIVAHTTSLFDIVVPLGEIAIGLGLIFGVFAYAASFFGAFVMINYI
                     LADMIFTYPLQLTFFILLLMSHSLLKQISLKEIINYFRGRKNRGEKIDDPLTDRG"
     gene            11214..11900
                     /locus_tag="O6Y56_002002"
     CDS             11214..11900
                     /locus_tag="O6Y56_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDB5575249.1"
                     /translation="MTHLLIVDDEQDIVDICQTYFEYEGYKVTTTTSGKEAISLLSND
                     IDIMVLDIMMPEVNGYDIVKEMKRQKLDIPFIYLTAKTQEHDTIYALTLGADDYVKKP
                     FSPRELVLRINNLLTRMKKYHHQPVEQLSFDELTLINLSKVVTVNGHEVPMRIKEFEL
                     LWYLASRENEVISKSELLEKVWGYDYYEDANTVNVHIHRIREKLEKESFTTYTITTVW
                     GLGYKFERSR"
     gene            11900..12955
                     /gene="saeS"
                     /locus_tag="O6Y56_002003"
     CDS             11900..12955
                     /gene="saeS"
                     /locus_tag="O6Y56_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     SaeS"
                     /protein_id="HDB5575250.1"
                     /translation="MVLSIRSQIIIGVVSSILLTSTILAIAYILMWFNGHMTLTLTLT
                     TIITSCLTLLICSIFINPLIQKIKQFNIKTKQFANGNYASNYKTFNSPKEIYELNQSF
                     NKMASEITQQMNQIKSEQQEKTELIQNLAHDLKTPLASIISYSEGLRDGIITKDHEIK
                     ESYDILIKQANRLSTLFDDMTHIITLNTGKTYPPELIQLDQLLVSILQPYEQRIKHEN
                     RTLEVNFCSEIDAFYQYRTPLERILTNLLDNALKFSNVGSRIDINISENKDQDTIDIA
                     ISDEGIGIIPELQERIFERTFRVENSRNTKTGGSGLGLYIANELAQQNNAKISVSSDI
                     DVGTTMTVTLHKLDITS"
     gene            complement(13028..>13235)
                     /locus_tag="O6Y56_002004"
     CDS             complement(13028..>13235)
                     /locus_tag="O6Y56_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDB5575251.1"
                     /translation="GVNIPGYFSTIAAILLLGGIQLISIGVVGEYIGRIYYEVKARPK
                     YIIQATNLSSIENDEKDTHKVYSK"
BASE COUNT         4512 a         2170 c         1948 g         4605 t
ORIGIN      
        1 aaaaacccgg attgatattt tatcaatccg agttcgtgtt taaatattat tttttagagt
       61 ttgctttagg tcctgtttca tatttatact tcgaaggatt tacctttttg aagtctggat
      121 ttttgtagaa tctaaacaaa tcaccattaa gcacgttgtc actcatttcg agatcctttt
      181 caacttgctt tttattcttt tcgaaatcag ctggttgagt agttatgagt tcattatttt
      241 tattagaata aatcttacca ttaacatatt tataatcttt tgttataaag tcaccatttc
      301 tgaatggaac tacttgatta tgacctttag agaataaatc agtaccgaac attaaatagt
      361 tcttcgtatc tataccagcc aaatgtaaaa ttgttggcat tacatcgact tgaccagcat
      421 attcattatt gataccacca gatttaccag ggattttaat ccagaaacca gttctgttta
      481 aatctgtaaa tttagctggt gtgatttttt cacctaatag tttttccatg gcattgttat
      541 ggttttcaga gataccatag tggtcaccat aaatcataat cactgaattg tcatataatc
      601 cttttttctt caagtcatta atatattctt ctaatgcttc gtctaaataa cgcgctgttt
      661 gaatataacc atcaactgtt gcatcacctg tgtttgactt ctcaatagtt gcatcctttt
      721 catctaatgt gaatggatag tggttagtca atgtaattaa atgagaatag aatggtgatt
      781 tcatcttagc ttgataatta gcagaatctt taaagaaaat tttgtctttc aagcctaagt
      841 ttacaacgtt tttatctgac atgtcatagt atgttgcatc atagaattta tcgataccaa
      901 agtgtttata tacttggtct ctgttccaga atgttttata gtcaccgtgc atgacatcag
      961 atttgtagcc ttgcttttga tctaaaattg ctggtaatga ctgatatgta ttatctcctt
     1021 ttaatgaaaa ggcagaacct tgcggtaaac cgtataaact gttatccatt gtaaattcag
     1081 agtcagatgt tttaccttga cctgtttgat ggaaaaagtt agggaagtat gtgaattgct
     1141 ctttcccact tgataatttg tttaaaaacg gtgttacttc tttaccatta acctttttat
     1201 taattaagaa ggtttggaaa ctttctaaat gaatcttaat aatatttttc ttctttgcca
     1261 ccccataata ttctgggtta ggctctgttt gacgttgttt cgtgtaattt aatacttttg
     1321 ttaagtcatc ttcagatgct aacgcttttt gttgattatt ttcgatagtt ttaacaccat
     1381 cgtatactgt aaagttatac ggtcctaaat atttcactaa atatttatgg tcaaatgtac
     1441 gtgttaataa ttctggtctg tcagtttcag caaaagctaa gtttaagaag aataatgcta
     1501 ctgaagccgc cattacgaca ggaacaaatt tcttactaaa tgcttttgtg tctaaccatt
     1561 ttgttttaaa tattaaaatg aataagtaaa ctaacgtatc aatgaaataa acaaagtcat
     1621 accatttgaa tgatgcacta accgcaccac ccatagattc tacgttacct acttggttta
     1681 aagtactaaa cgttaaaaaa tccgagaaga atctaaagta cacaacattg gcatataata
     1741 ggaacgtcaa taagaagccg cctatgaaca tgaaccaaaa tgcttttttg cctttaaaga
     1801 ataggaacac acttaaaacc agtgctacta aactataagg attcatcaat aatattaagt
     1861 tttgtactaa acctttaaca cctaaagaaa aatcaacata ataagaaaaa tacgtcttca
     1921 aggtaatcgt tattacggtt aataagaaga acgcaaaaag actaattttc tttttttgtg
     1981 aactcatgat tctttccccc gttatttaga taataaatct tgcgaaagta cttgaataaa
     2041 ttagatatta acattatgta gttaattaat aagtgcgttt aaaagttaac attgtcataa
     2101 ttatagtaat tactttcaga ttcaagttta taattttcat tatttgtagc tttcaacttt
     2161 gatttaacaa gtattttggg ctacaactca tatttgcttg tgtaagtttc tttatttaat
     2221 attatcattc aattaacaaa tttaaaattt gtaatcaaat tgtaataata agcatagctc
     2281 aattaataaa tatagagtaa ttttagtcaa aattcaagta aaaacacact ttatcttttc
     2341 attttactgt gaaacgaatt agaatatgat acatttcgca gataaaacac agtattattt
     2401 cattatacat taggaggaaa ttatttgcat cggactctag tatgagctac gtaccaaata
     2461 ttatttcatc atttctaatt gcattctata ttctattcca tgaaataatt ggtttaacca
     2521 gttactatac ttaacaaggt tcttttcagc cgttaaaata tctataaatt gaaatttcaa
     2581 acgtgatcct tgcggttttt gtgctaattt cgttaaatga taacttgcga ttgtaccgat
     2641 ttgcgggtag ctacctagtg tataatgatc atttaataag ataataggtg tgccatcacg
     2701 cttaatttgt atcgttcctt ttttgacagt ctgatacggt ggcatatctt cataaaaagc
     2761 tttgattttt tcaccttcaa gcatcatccc catgcgattt gctttgctcg ttactttata
     2821 atcatgtttc acaaatcttt gaatggcatc ttctttaaaa tcttccgtac ctttattttt
     2881 aacgacatga aatacatcag acatataatt aaatgacaag gcgtatccat caatacccca
     2941 atctgtttgt ttcgtgtgag caaggttttc aaataactta tgatgacgag ctgtataatc
     3001 tctcttaagc tttatttcat cgccatcttg taatgttcta cctttaaaac caccaatttt
     3061 tacattaaag tcggttgaat tagatcctaa ccatgcatct aattcaaatc cgcctcccac
     3121 agctaaatac actcgcgatg tataacttgt ttctctaaac tttaaaacat cgcctttatc
     3181 taacaaatac aatttatatg gagatatagt catatgctca gtgtaagctt tgacattacc
     3241 ccctgctaat gcaatcagcg taggttctgt aaaacgaatc gttgccattt tattagtcat
     3301 ttccaaagtt gcttcattct tgtcatttgc aactaatcga ttagcaattt catgtgctaa
     3361 agtatcaagt gcaccacatg gaattacacc atcatgttca tatccccttc taccaaagtc
     3421 ctgaaagcta ctgaataagc cacttttttc aattatgatt gacatcttta aacgctccta
     3481 cttctaattc attttcattg ataggtctaa atttaatatt atcgcctaac tttaagcgtg
     3541 cgaaatctga ttctttcgga ttaaaaagtg ataatggtgt ataaccaata actaaccaat
     3601 cattaattgt atccgttgtt acaataccgc attttttccc ttcaagtact acagaaccag
     3661 ctggaatgaa ttttttctgt ttactcgtgt gattaatata caatttctta tttaatccag
     3721 ttaaataagg aaacccaggt gaatatccca tcatcgaaac aaaatattgc gccttagagt
     3781 gtaattcaat aaatgtttct agcttgattt tgtaatgttt taaaagtgat tctaaatccg
     3841 gaccatattt cgaaccatac acaattggta tttcaatcaa atcttgctgg ttaaaatcat
     3901 gttttatgtt taaatgaatc gattcaatta gtgctttcat gtataaaaaa ggtgattgta
     3961 tattatggtg tttaatcata tcccttgcgt catagacaat catcatgtct gattctgatg
     4021 gcacaatttc tataataaat ggataatttt gttcaattaa atatgagcga agtgttaata
     4081 aatcttcggt taaactttta gatacttctt tttcaattgc gactacaatg gcttggtcac
     4141 cttgactata tattttcatt tgtacacctc ttcaatattt ggttacttta ctttgacttt
     4201 taattataga atcgattgaa tagttcattt acgttcattt tacctactac taaatttact
     4261 ggtgatacat taaatccatt gctcgcacaa caaaaggcat aagttcgtga attaatgcgt
     4321 atacaaggat aaagcttata acagtagtaa ttgttgctat caaacgaaca acatatattc
     4381 tattttcaga tagcaatcga ttcactaatc gataattcac gtatacaaga attaacaaca
     4441 gcgcaatata aacaataatc atatttggcc ccatttaatt tttaaatttg ttttcacttc
     4501 attttctaca ttattatcat actaatttta aaggcaaagg tggacatcgg caacctctcg
     4561 taaactattt atcaaaaata aacgtatctc attgttatga tatttataaa tcaattcggt
     4621 tttattaaaa tctttttcaa caagtttgtc actatctatt aaataatcac gcatgcatcc
     4681 ttttaagaaa tcatctttat aacttggtgt gtaccatttt ccatcctctt caatgacaat
     4741 gttgccaata tcaaattcaa ggaccttgcc gtcctctgaa gttagcaata ttaaatctgt
     4801 ttcatgattg tgtgctaaat gctttcgttc tgtcgtttta ttatttataa aagttggatt
     4861 aactgttttg ggcaacactt gaaattttgc tgtaaaacta cttttctcag gtaaagatga
     4921 cactatcgtt tcaaattcgc tttcagcatt taatacgatt ttaagtctat attggccact
     4981 gtgatacttt gttgttacat catttaattc atttcgccat gcatgttcat caaatttaaa
     5041 gtttaatcgc tcagaagaac attttatgcg attagtatga taagtaagtc tagggatatg
     5101 tccattatca attttcattg tttcaaataa ttgcattata acatctccaa aatcttggtt
     5161 tttgcgtaaa attcatttac ttcatctttt ggcttagaat caattgtaat acctgctccg
     5221 actccataaa tcgcttgtcc atatttatac tcaatagtac gaatcggaat attaaaaatc
     5281 attttatcat cttcagttgg aagtaatagt ccaattgctc cgcagtatat accacgaggt
     5341 gaactttcta attgtttaat atatttcatt gtattcagtt tcggtgcacc tgtaatcgaa
     5401 ccacaaggaa ataacgatgt taaaatttga gttaagtctg tattagtttt taaagttcca
     5461 ctcaccatcg aagtcatttg aaatacagtt ttatatgcct caatgaaaaa tagtttatat
     5521 accttaattg agccactctg tgatattctc cctatatcgt ttcttagtaa atcaacaatc
     5581 atgacatttt ctgcacgatc tttcgaagaa gtttgcaatg ttttataata ctgttgatct
     5641 tcagcttccg ttttacctct aggcattgtc cctttcatcg gtttgcttat gataacgtta
     5701 tcgacattgt taaactgtcc tttttgaaaa aataattctg gtgagataga cgctacttgg
     5761 atttcatctg tttgtaataa cgcagtataa ttaccattac taaattgagt taatcgttca
     5821 tataaagtac taataggata ataaatgtta tccgttaagc gcgccgtata gttcacttga
     5881 tacgtttccc cttcaacaat tgcttgttgg acacgtttaa tattagtcat cataacctca
     5941 gaagattcaa caaatgaaaa atgatgcttt gatacataag aagtttgatg ttcatatgtt
     6001 gaatttatgc tttccgcttt ttcaaaacta taagctactg cataaatatc atctttagct
     6061 aatgaatgtg tacacataac atgattaaaa tactttgccg cttcgtaact taaatataac
     6121 gagacatatc taccttgtcg ttgctgcgct tgtgcaaagt gtatcacttc tcccacatca
     6181 gccaacttag tggcaacata cttctttata aatcccttta attgaatatg gtattgctta
     6241 tattcatttt cagttaaata gtagcgataa ttatattcta ttctcacagt aatcacctac
     6301 cttcgataaa aataattcaa cttgtcgata accgtattca ctcaaaatag attcaggatg
     6361 atattgcaca ccaaaaaccg gaaatgtaat atgctcaaat gccataataa tcgcttcatc
     6421 gttttttgct gtaatcttta agcaatttgg aaaagtcgct ccgtcagcaa ttaatgaatg
     6481 ataacgcatt acattgaaat tttgaggcag tccttgaaaa ataccttcat tggtatgacg
     6541 taactgtgta gtatgtccgt gtacaggatg atagccgtga atgatatttc caccaaaata
     6601 agacacgata cattgaaatc ctaaacatac acctaggata ggtacacgct gataaaattg
     6661 ttctaacact tcattcaaga taggataatc atccggatta cccggcccag gtgaaataac
     6721 aattgctttt ggcttcatat taatgatgtc ttctatcagc agattatcaa taccaacaac
     6781 ttgaactgtt agtttcgttt gagtcttaat atagtctatt aaattatatg taaatgaatc
     6841 attattatct atgactagaa tcattgtata ctccgttcta aatgtgtttt atttttataa
     6901 tatgtattgg atgtagctaa aactttaaaa gcattgtcat tatcctgacc ttgattttaa
     6961 ctaatatatg gtatattcta ttcatcgtac ataaatgaat atcagaggtt cctagctgaa
     7021 accctctata aaaaactaga cattgaaatt tcaaacattc cttggtaaac ctttaatata
     7081 tattatagga gcaacccatt tctttcgtct atcttttatg gagataggct ttttttattt
     7141 tataaattaa aaacgggctt atcaatgcca ttaacctctt tattaatatt attaatgata
     7201 ggagcaatta caaaatggaa agtgtattaa ataatgaaaa agccatcgtt gtctttagtg
     7261 gtggtcaaga cagtacaaca tgtctctttt atgcaaaaaa acatttcaaa gaagttgaac
     7321 tcgtaacgtt taattatggc caaagacatg atactgaaat tgaagtcgca aaacaaattg
     7381 cacaagatca aggaatgaaa catcacgttt tagatatgtc attattatca caacttactc
     7441 caaacgcatt aacacaacat gatatggaaa ttactaataa tgaagatggt atacctaata
     7501 catttgttcc agctagaaat ttacttttct tgtcgtttgc aggcgctcta gcttatcaaa
     7561 ttggggctaa gcatattatt acaggcgtat gtgaaacaga cttttcaggc tacccagact
     7621 gtcgcgatag ttttataaaa tcaatgaacg taacattaag cctagctatg gacaaagatt
     7681 ttgttattca tactccttta atgtggttaa acaaagcaga aacgtggaaa ttaagtgatg
     7741 aactcgaagt tttagattat attcgtacaa aaacattaac atgctataac ggtatcatcg
     7801 gggatggctg tggtgaatgt ccagcttgtc atttacgtca acgtggacta aatcaatatc
     7861 ttgaaagtaa aggagcgctt taaaatgtta caacaaatct atcctagtac aacgcatcca
     7921 tatcaattcg aattaaataa agattttaat ttttcagctg cacatcacat tccgtgtgaa
     7981 gaagcaggta tttgtcaaaa tgtccatggt catacttact ttgttaattt aacaattgtc
     8041 ggtgataaac tagatgacac tggcttttta gtgaacttta gccatttgaa aaagatgata
     8101 cacggtaaat ttgaccatca actgttaaat aacttacctg cttttaaaaa caaaatccct
     8161 tcaactgaaa tcgtagcgga aacaatttat caaattgtta aagaaaattt ggcatcgctc
     8221 gaacaccaac caaaatgtat tcaagtattt gtaagagaaa caccaacaag ttatgtcgta
     8281 tttagaccaa aggaacaggt gtaactaatg gctaaaattc ctgtactcga aatattcggt
     8341 ccaaccattc agggtgaagg tcgagtaatc ggtagaaaaa cgatgtttgt gagaacagct
     8401 ggatgtgatt atcgctgtag ctggtgtgat tctgcattta cttgggatgg tagtgctaaa
     8461 agcgatataa aactcatgac tgctgaagaa atttatgatg aattaaaacg aattggtggc
     8521 gatttattta accacgttac aatttctggt ggtaacccag cattaattaa aggtatccaa
     8581 gagttagttg acttatttca agataaaggt attttcagcg cactggagac acaaggcagt
     8641 aaattccaac cttggatgac acaaattgat gatttaacga ttagtccaaa accaccaagt
     8701 tcaactatga cacctgattt aaaaaagtta gatgaagtga ttgcacaatg cgtaccttcc
     8761 tcattaaact taaaagtagt tgtattcgac gataaagatt atgattttgc caaaatgata
     8821 caccaccgtt atccagatat tccgttctat ttacaagttg gtaacccata tttatcagac
     8881 agcgtagata atcataccga aaagttgtta gaacgctacg agcagttggt agatttagtt
     8941 atgcaaagta atgatatgaa tcacgtttat gtgttaccac aacttcatac attactttgg
     9001 agtaataaaa aaggtgtata aaggataact tattttactt tttacaagtc atatctaatg
     9061 aataacaata tataaattga tataatagtt gattgaagta taacgaacag gagtccatca
     9121 tgattgtata tatattaatt aatattgcta tcgtcgtact tataactgga ttcaatttat
     9181 ataggcatca aatgcaacat ttatcattaa gtgcaatgtt gttatctatt actataaacg
     9241 cctttataaa tacattcata attgataaat ataactttat tactctgtgt actataacga
     9301 tgtttatcat ttggacgata ctacagtttt acattgataa aaaattaaaa cctgtataca
     9361 ttacagacca aaaatttatt gctatcatat taacgattgt tgtcagttta acgcaacgtg
     9421 ttaccgactt ttcaagtaca caatcaatat atatgtctat tccattttta gcccctgcca
     9481 tttttatcat tggtggtatt atgttgttta tttcaacatt taataactta gatgaaactg
     9541 ctgaaaataa taacaaaata aagaaactaa tgattaaagg acttatcatt attaacattt
     9601 catttatcgt tatgatggtt ttaacaccat attggtactt gtatttaatc gtctatctta
     9661 ttttcttgtt gtttttattg tggcaaaagg tttataaatt ttaataccaa tactataaaa
     9721 cacttctgat attcttagtt cgatatatca gaagtgtttt atagtgataa ctagtttaga
     9781 taaatatttt cttactaaaa aaaccgccct cctcttattt tgactcctat ttatttaaat
     9841 cagacaatta ttttcatttt caaattattc tttcttcaat attagttaag cgatatttaa
     9901 acgaagttaa gaattagtta atggcatatt atttgccttc attttaaact taacttatca
     9961 aattgaagaa atgaggagtt agcatgaata caaaatattt tttagcagct ggtgctgtta
    10021 tcacaacatt agctttaggt gcttgtggta attctaattc acaagatcaa ggtaacaaaa
    10081 ctgaacaaaa aacaaagtca gaagatagca atgttaaaac tgataaaaca aaacacctaa
    10141 caggtacatt cagttctaaa aacggtgaaa ctgttgaagg taaagctgag attaaaaatg
    10201 gtaaattaat gcttactaac tacaaatcat caaaaggtcc agatttatac gtctatctaa
    10261 caaaaaatgg cgacattaaa aacggtaaag aaatcgcaat ggttgactac gataaagaaa
    10321 aacaaacatt tgatcttaaa aatgtagatt taagcaaata tgatgaagta acaatctatt
    10381 gtaaaaaagc tcacgtcatc ttcggcggcg ctaaattaaa ataatcaatt tctgagttaa
    10441 acttttattt acaacatact attactatac attacaaatt ttaaaaatat acattacact
    10501 cattactcaa tggaaagcgt atgatttcac agccccccta gcttgtagaa atcatacttt
    10561 ccttttttca atatatatat aactattaaa tcccataaga ttgtagagca cataagtaaa
    10621 tttttttaga gcttgaggtt tgtttagctt aagcaaccca tgagctcaaa cacttcctgt
    10681 tcacataaca ctacaaatcg cattatgttg cttaatctta tgtttatata aattacacac
    10741 aataaataga aagaatgtga acatcatgaa taaattattg ctactcgtta catttatcat
    10801 tcgtgtgggt tcaggtattg ttatgttaat gcaaggttac gaaaaattaa cgggcggatt
    10861 tacgctgaaa ggtttagtac cagtcatcgc taacaatact gattcaccag agtggtataa
    10921 gtggtttttc gcaaatatag ttgcacatac gacgtcatta tttgatattg ttgtcccact
    10981 cggagagatt gcaattggat taggtttaat ttttggagtt tttgcatatg ctgctagttt
    11041 ctttggagcc tttgttatga taaattatat cttagcagat atgatattta cgtatcctct
    11101 tcaattaact ttctttatcc ttttactaat gagtcactca ttgttaaaac agatttcact
    11161 taaagaaatc attaattact ttagaggtcg taagaacaga ggtgaaaaaa tagatgaccc
    11221 acttactgat cgtggatgat gaacaagaca ttgtagacat ttgtcaaacc tattttgaat
    11281 atgaaggtta caaagtaaca acgacaacta gcggtaaaga agcaatttct ttactatcaa
    11341 atgatattga tatcatggta cttgatatca tgatgccaga agttaatggt tacgacattg
    11401 tcaaagaaat gaaaaggcaa aaattagata tcccctttat ctatttaact gccaaaacac
    11461 aagaacatga taccatttac gccttaactt taggtgcaga tgactatgtc aaaaaaccat
    11521 ttagtccaag ggaactcgtt ttacgtatta ataatttact tacaagaatg aagaaatacc
    11581 atcatcaacc agttgaacaa ctgtcgtttg atgaattaac acttattaac ttaagtaaag
    11641 ttgtgactgt aaatggtcac gaagtcccta tgcgtattaa ggaatttgag ttattgtggt
    11701 atttagcttc tagagaaaat gaagttattt ctaaatcaga attacttgaa aaagtttggg
    11761 gatatgacta ttacgaagat gctaataccg tgaatgtcca tatacaccgt attagagaaa
    11821 aattagaaaa agagagcttt acaacatata ccatcacaac tgtatgggga ttaggatata
    11881 aatttgaaag gagccgataa tggtgttatc aattagaagt caaatcatta ttggcgtcgt
    11941 atcgagtata ctattaactt caactatttt agcaattgca tatattttaa tgtggtttaa
    12001 cggccatatg acactaactt tgaccttaac gacaataatt acaagctgtt taaccttatt
    12061 aatatgtagt atttttatta atccacttat acaaaaaatt aagcagttta atataaaaac
    12121 taagcaattt gctaacggaa attacgcaag caattataaa acgtttaatt caccaaaaga
    12181 aatttatgaa ttaaatcaat cttttaataa aatggcttct gaaattacgc aacaaatgaa
    12241 tcaaattaaa tccgaacaac aagaaaaaac agaactgatt caaaacttag cccatgattt
    12301 aaaaacacct ttagcaagca ttatttcata ttctgaagga ctacgtgatg gtataatcac
    12361 aaaggatcat gagattaaag agtcatacga catattaatt aaacaagcaa acagattatc
    12421 aacattattt gatgatatga ctcatattat cactttaaat acaggtaaaa catatccccc
    12481 agaattaata caactagacc aattacttgt atcaatattg caaccatatg agcaacgtat
    12541 caaacatgaa aaccgcacat tagaagtgaa tttctgtagc gaaattgatg cattttatca
    12601 atatcgaacg ccacttgagc gtattttaac aaacttactt gataatgcgc taaaattttc
    12661 aaatgttggt agtcgcattg atattaatat tagtgaaaat aaagatcaag atactatcga
    12721 cattgctatt agcgatgaag gtattggcat tataccagaa ctacaagaac gtatattcga
    12781 acgtacattc agagtagaaa actctcgtaa tacaaaaacg ggtggttctg gattaggctt
    12841 atatatagct aatgaactcg cgcaacaaaa taacgcaaaa atcagtgtaa gcagtgatat
    12901 agatgtagga actacgatga ctgtgacatt acacaaatta gacattacgt cataatccga
    12961 tttatttata aaataaaatg caaagactaa aaagaagctc tcattgatga gggcttcttt
    13021 tatttgttta tttagagtaa actttatggg tatccttctc atcattttca atacttgaaa
    13081 gatttgtagc ttgaataata tatttaggac gtgccttaac ttcataatat atcctgccaa
    13141 tatattcacc tacaacacca attgaaatta actgtatgcc gcctaataat aaaatagctg
    13201 caatcgttga aaaatatcct gggatattaa cacca
//
LOCUS       DALMNS010000084        12722 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.084, whole genome shotgun sequence.
ACCESSION   DALMNS010000084 DALMNS010000000
VERSION     DALMNS010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 12722)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12722)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12722
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.084"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..803
                     /locus_tag="O6Y56_002005"
     CDS             <1..803
                     /locus_tag="O6Y56_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014937090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575252.1"
                     /translation="RNEVFLKKHKDEAIKKYKDYVKDTFGYDCKINLVEAYTNKSGFS
                     EKSKTDGLVVVGTVNYDVPFQFRLIFVESRNGVTITTFTPGHINETSAAVSAMMYKRY
                     EHDIEKARLKFKSEVERNGYYAMNEKLQKKQEFNGVTKQYLNFNTVSIDDLDKFKKEF
                     KPVMHLKGDAFNQQLQSLINKYPQIQKNMKSEFIGYYDKDANKETVADYAWSLKKPTN
                     EIMKTYPGEKRMRFYKDKVSPYELDQYGRLNPDADEIYVIGGNYNEKK"
     gene            790..2505
                     /locus_tag="O6Y56_002006"
     CDS             790..2505
                     /locus_tag="O6Y56_002006"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575253.1"
                     /translation="MRKNDHITDLDAIELSSGWNYNDKITLSDEIHVNGNKYKVIKDQ
                     KPTNTGLGYKLYERYDNDRSTGKLIISFDGTDFSDPNDVGTDLRLAGDSIPNQLEEAH
                     KVYSDLKQKYSDASSLSDIEFYNKYKEASIDYKGKSITNAGGNSLSGAIAQYLGVLDP
                     GLNVTTTNSAPIPKSLTRMSRRDANNIHNYHSRSDTLTRINIGGLMYHSMVGKHIFLE
                     NGVSTFGALVPAHTGYNFEEKEKLDHFDQNNIINKEVYTSRNGLKIYADMDEHTPIFV
                     WSGDAIGAGTSKIKLDKGHLADLNDYVHGRLTEYVNNIDIKMKDIRTSVERENNNFSQ
                     HVNETKDHFKKVIKLNELEGWIHNISNLIRTKIESKADELKGNLRTLRDQDNILDLVG
                     ADHIINSIIDFIDKITDKISKFIKYGDDFMEAAFDIVSNTIVKMFVNLSEGFEDGVRE
                     EVLAHLNVVIPNIQIIKNQVTNFGDGINDILTQMTHLDDNVMVNNVPINKNATKQTSK
                     PLAESKNLLLNLEIRNKVMESGLATLASNINLLLVPETLRIIALISIVDACTPTLSNF
                     VGKIE"
     gene            2599..2883
                     /locus_tag="O6Y56_002007"
     CDS             2599..2883
                     /locus_tag="O6Y56_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001236997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575254.1"
                     /translation="MRLILGELIFTEFVIVEMQDFFKNALLSDSLLRDIKVLSSNAKG
                     DADMLETELHAVINAMSQNEGKSVDALKNSTASLKNNLTKLKEQLDKTTH"
     gene            3033..3392
                     /locus_tag="O6Y56_002008"
     CDS             3033..3392
                     /locus_tag="O6Y56_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575255.1"
                     /translation="MILRYVTNLKLAKELYQASKPKLQEDKGMIELFEHTFGLQKELV
                     KYVGIAEATTAALYSASFINKNISRLASLSTIGILSVAAYKHFEAGHGKKGAQHALDL
                     LGLATLSLLDTFSCNKK"
     gene            complement(3477..4088)
                     /locus_tag="O6Y56_002009"
     CDS             complement(3477..4088)
                     /locus_tag="O6Y56_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HDB5575256.1"
                     /translation="MHTFDAQSLTARENYKLLIGSIIPRPIAFVTTLNQDASVNAAPF
                     SFFNIVNNHPPMIAIAVQRAGGKRKDTALNIERTGDFVVHITDEDNVQDINETAAPLA
                     YGDSELSRTELSLLTSTTIKTPGIKDAKMRFECKLSQMILLGDVLDGADLIIGEIVTY
                     HIDDSIYEGDFKINPHALQAVSRLAGNDYAKLGGIFTIKRPEK"
     gene            complement(4167..4643)
                     /locus_tag="O6Y56_002010"
     CDS             complement(4167..4643)
                     /locus_tag="O6Y56_002010"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase"
                     /protein_id="HDB5575257.1"
                     /translation="MAVVYVAGGCLWGVEAFFTTIPGIIHTEAGRANGRSSKLDSPYD
                     GYAECVKLHFDDRMLTITDIMNYLFEIIDPYSVNRQGNDIGEKYRTGLYSCVDDHLIE
                     ARQFIERRKDRDQIAVEVLPLSNYIKSAEEHQQHLEKYPEDMHMCHISKDLLNKYK"
     gene            complement(4646..5146)
                     /locus_tag="O6Y56_002011"
     CDS             complement(4646..5146)
                     /locus_tag="O6Y56_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5575258.1"
                     /translation="MVLRKVIMQDLDQIIALENIGFSPEEAATPEALKLRIEQIQETF
                     IVAEKNDEVIGYINGPVIKERYISDDLFKNVPTNNSEGGYISVLGLVVAPNYQGQGIA
                     GRLLNYFENLAKNQHRHGVTLTCRESLISFYEKYGYRNEGVSESCHGGIKWYNLVKNI
                     KKDNEV"
     gene            complement(5381..6148)
                     /locus_tag="O6Y56_002012"
     CDS             complement(5381..6148)
                     /locus_tag="O6Y56_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HDB5575259.1"
                     /translation="MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHL
                     HPRYDNTFQQVLVKLAELRTNPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRS
                     KYLLIEFPTGEVPHYTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALS
                     QLTSSSLVGGFGKSIQKLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYS
                     NDIEALLRNASSVINDNFVYLDRPTKPGKVKSFLKWF"
     gene            complement(6145..6837)
                     /locus_tag="O6Y56_002013"
     CDS             complement(6145..6837)
                     /locus_tag="O6Y56_002013"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HDB5575260.1"
                     /translation="MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSI
                     VITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPNNEGLSSLLL
                     NWSTYQDSIISTEIQDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPP
                     VNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKS
                     ASYYAYYGTDES"
     gene            complement(6854..7516)
                     /locus_tag="O6Y56_002014"
     CDS             complement(6854..7516)
                     /locus_tag="O6Y56_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein
                     CapA"
                     /protein_id="HDB5575261.1"
                     /translation="MKEKFDLVKLLNILKKNIKLLLILPAICLVVSAALTFFVMPDKY
                     TASTQILVNMKKSSSDLAFQNVQSSLQSVNTYTEIIKSPRILDKVSREFDGQYSTAEL
                     NSFLKVTNQTNSQIITVSVTTGNKSESDKIVNRISKVFAHDMPKIMSVDNVTILSSAH
                     DNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQ
                     KF"
     gene            complement(8364..8924)
                     /gene="icaR"
                     /locus_tag="O6Y56_002015"
     CDS             complement(8364..8924)
                     /gene="icaR"
                     /locus_tag="O6Y56_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ica operon transcriptional regulator IcaR"
                     /protein_id="HDB5575262.1"
                     /translation="MKDKIIDNAITLFSEKGYDGTTLDDIAKSVNIKKASLYYHFDSK
                     KSIYEQSVKCCFDYLNNIIMMNQNKSNYSIDALYQFLFEFIFDIEERYIRMYVQLSNT
                     PEEFSGNIYGQIQDLNQSLSKEIAKFYDESKIKMTKEDFQNLILLFLESWYLKASFSQ
                     KFGAVEESKSQFKDEVYSLLNIFLKK"
     gene            9088..10326
                     /gene="pgaC"
                     /locus_tag="O6Y56_002016"
     CDS             9088..10326
                     /gene="pgaC"
                     /locus_tag="O6Y56_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly-beta-1,6 N-acetyl-D-glucosamine synthase"
                     /protein_id="HDB5575263.1"
                     /translation="MQFFNFLLFYPVFMSIYWIVGSIYFYFTREIRYSLNKKPDINVD
                     ELEGITFLLACYNESETIEDTLSNVLALKYEKKEIIIINDGSSDNTAELIYKIKENND
                     FIFVDLQENRGKANALNQGIKQASYDYVMCLDADTIVDQDAPYYMIENFKHDPKLGAV
                     TGNPRIRNKSSILGKIQTIEYASLIGCIKRSQTLAGAVNTISGVFTLFKKSAVVDVGY
                     WDTDMITEDIAVSWKLHLRGYRIKYEPLAMCWMLVPETLGGLWKQRVRWAQGGHEVLL
                     RDFFSTMKTKRFPLYILMFEQIISILWVYIVLLYLGYLFITANFLDYTFMTYSFSIFL
                     LSSFTMTFINVIQFTVALFIDSRYEKKNMAGLIFVSWYPTVYWIINAAVVLVAFPKAL
                     KRKKGGYATWSSPDRGNTQR"
     gene            10290..10595
                     /gene="icaD"
                     /locus_tag="O6Y56_002017"
     CDS             10290..10595
                     /gene="icaD"
                     /locus_tag="O6Y56_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular adhesion protein D"
                     /protein_id="HDB5575264.1"
                     /translation="MVKPRQREYPTLKSSLNIVRETALIAISCVFWIYCLVVLLVYIG
                     TIFEIHDESINTIRVALNIENTEILDIFETMGIFAIIIFVFFTISILIQKWQRGRES"
     gene            10592..11464
                     /gene="icaB"
                     /locus_tag="O6Y56_002018"
     CDS             10592..11464
                     /gene="icaB"
                     /locus_tag="O6Y56_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intercellular adhesin biosynthesis
                     polysaccharide N-deacetylase"
                     /protein_id="HDB5575265.1"
                     /translation="MKYRKLIILVLSILIILPVSTLDGHHIANADDDPPKKLKYKENS
                     ALALNYHRVRKANFLNNFIYFFSSSKEIKNYSVSQSQFESQIKWLKSHDAKFLTLKEF
                     LYYKKKGKFPKRSVWINFDDMDETIYENAYPILKKYKIPATGFIITGHVGEENFHNLD
                     MISKKELKEMYKTGLWEFETHTHDLHNLSKNNKSKLMKASEATIIKDLNKSEKYLTKN
                     FKKSQKTIAYPYGLMNDDKLPVIKKAGLKYGFSLEEKAVTPNSNDYYIPRILISDDAF
                     EHLIKRWDGFHEKD"
     gene            11451..12503
                     /gene="icaC"
                     /locus_tag="O6Y56_002019"
     CDS             11451..12503
                     /gene="icaC"
                     /locus_tag="O6Y56_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide intercellular adhesin
                     biosynthesis/export protein IcaC"
                     /protein_id="HDB5575266.1"
                     /translation="MKKIRLELVYLRAIICAIIIITHLLTQITLKHENLEGGSLVLQF
                     YIRNIVIFGTPCFIILSQLLTTLNYQKVTYRYLTTRVKYILIPYILMGLFYSYSESLL
                     TDSSFNKQFIENVLLGQWYGYFIVVIMQFFILSYIIFKINYNLFNSKILLLLSFILQQ
                     SFLYYFTNNTAFHDTVLHYYPLSENTIIFGWIFYFFLGAYMGYNYERVLNFLERYLVI
                     MIVLAVATYFVFIALANGDYWNVTSFSYSLTPYNSIMFIVILGICTHFKTMLFNTIQM
                     ISAFSFFLYLLHPIILDSLFAYTNIFEDNTMVFLAISLLFILGLCIGVGMILREFYIF
                     RFIIGKQPYKLNINAY"
BASE COUNT         4386 a         2054 c         1908 g         4374 t
ORIGIN      
        1 aaagaaatga agtatttctg aaaaaacata aagatgaagc gatcaaaaaa tacaaagact
       61 acgtgaaaga cacctttggt tatgattgta aaattaattt agttgaggcc tatactaata
      121 aatctggatt tagcgagaaa agcaaaacag atggtttagt agtcgtcggt actgttaatt
      181 atgatgttcc ttttcagttt agactgatat ttgttgaatc tagaaatggc gtaactatca
      241 caacatttac acctggtcat ataaatgaaa catcagcggc cgtttcagcc atgatgtaca
      301 aacgttatga acacgatata gaaaaagctc ggttaaaatt taaatcagaa gttgagagaa
      361 acggttatta tgccatgaat gaaaaacttc aaaagaaaca agaattcaac ggtgttacta
      421 aacaatattt aaattttaat accgttagta tagatgacct agataagttt aaaaaggaat
      481 tcaagcctgt catgcactta aaaggtgatg cattcaatca acagttacaa tctttgatta
      541 acaaatatcc acaaatacaa aaaaatatga agtccgagtt tattggctat tacgataaag
      601 atgcaaataa agaaactgta gctgattatg cttggagtct aaaaaaaccc actaacgaaa
      661 taatgaaaac atacccaggt gaaaaacgca tgagatttta caaagataaa gtatcacctt
      721 atgaacttga tcaatatggg cgcttaaatc ctgatgcaga tgaaatatat gttatcgggg
      781 gcaattataa tgagaaaaaa tgatcatata accgatttag atgctattga attaagtagt
      841 gggtggaatt acaatgacaa aataaccttg tcagacgaga ttcatgttaa tggaaataaa
      901 tataaagtta ttaaagatca aaaaccgact aatacaggtc tcggttacaa gttatatgaa
      961 cgttatgata atgatagaag tacaggaaag ttaatcatat catttgatgg tactgacttt
     1021 agtgacccga acgatgtagg tacagattta agactcgctg gagactccat tccaaatcaa
     1081 ttggaagaag cacacaaagt gtattctgat ttaaaacaaa aatacagtga tgcaagttct
     1141 ttaagtgata ttgaatttta taataaatat aaagaagcgt ctattgatta caaaggaaaa
     1201 tcaatcacaa atgcaggggg taattcactc tctggagcca tagcccagta tttaggtgta
     1261 ttagatccag gtcttaacgt aactactaca aattctgcac ctataccgaa atctcttacc
     1321 cgtatgtctc gtcgagatgc aaataatata cataattacc acagtagaag tgatacctta
     1381 actagaatta acataggtgg acttatgtat cattccatgg tcggaaagca cattttccta
     1441 gaaaatggtg tgtctacgtt tggagcattg gtacctgctc atactggata caactttgaa
     1501 gaaaaagaga agttagacca ttttgatcaa aacaatatta ttaacaagga agtctacacg
     1561 agtcgcaatg gattgaaaat ttatgctgac atggatgaac acactccaat atttgtatgg
     1621 agtggtgatg ctattggtgc tggtacatca aaaataaaat tagacaaagg acatctggcg
     1681 gatctgaatg actatgtgca tggtagatta accgaatatg taaataatat tgatattaaa
     1741 atgaaagaca ttcgaacatc cgttgaacgt gaaaataata attttagtca acatgtaaat
     1801 gaaacgaaag atcattttaa aaaagtaata aaacttaacg aattagaagg ttggattcac
     1861 aacatatcca atctgattag gactaaaatt gaaagtaaag cggatgaatt aaaaggtaac
     1921 ctcagaacac ttagagacca agataatatt ttagatttag taggtgccga tcatattatt
     1981 aattcaatta ttgattttat tgataaaatt accgataaaa tttcaaaatt cattaaatat
     2041 ggtgatgatt tcatggaagc tgcttttgat atagttagca acactattgt caaaatgttt
     2101 gtcaacttat cagaaggatt tgaggatggt gttagagaag aagttttagc ccatttgaat
     2161 gttgtcatac caaatattca aattatcaaa aatcaagtca ctaatttcgg tgatggcatt
     2221 aatgatatat tgacccaaat gacccatttg gatgacaatg taatggttaa caacgtaccc
     2281 atcaataaaa atgctacaaa gcaaacatca aaaccacttg cagaatctaa gaatttatta
     2341 ttaaatttag aaatccgaaa taaagtgatg gaatctggtt tggctacact tgcgtcaaat
     2401 ataaatcttt tattagtacc agaaacacta agaatcattg cgctcatttc tatagttgat
     2461 gcatgcacgc caacattatc taattttgtt ggtaagattg aatagattgc ctccaaagtt
     2521 ccatttgcca agacaacagc ggaaacactt aaatctttca aaaatcttgt tgataaatta
     2581 catcaacaat taactgatat gcgattaatc cttggtgaac ttatttttac agaatttgtt
     2641 attgttgaga tgcaagactt tttcaaaaat gccctactat cagatagcct tttaagagat
     2701 attaaagtat taagttctaa tgctaaaggt gacgccgaca tgttagaaac ggaacttcat
     2761 gctgttataa acgcaatgtc tcaaaacgaa ggtaaatctg ttgatgcact taaaaatagt
     2821 accgcttctc taaaaaacaa tctaaccaaa ttaaaagagc aactcgataa aaccacacat
     2881 taaattcata tattttgagt gaatagaatt atatttccat agcaaacatt cctgaactac
     2941 atatgttaca taagagattc atttttgaag aaacgggtaa aatgataaaa caaccgtttt
     3001 tcaaaaaatc aaatattggg aggaataaaa atatgatttt acgttacgtg accaatttaa
     3061 aacttgcgaa agagctatac caagccagta aacctaaatt gcaagaagat aagggtatga
     3121 ttgaactgtt tgaacatact tttggcttgc aaaaagaact tgtaaaatac gtaggcattg
     3181 cagaagcaac tactgctgct ttatactcag ctagctttat caataaaaac atttctcgtc
     3241 ttgcttcgct atcaacaata ggtattttaa gtgtagctgc ttacaaacat ttcgaagctg
     3301 gtcatggaaa aaaaggtgcg caacatgcat tagatttatt aggacttgct actttaagtt
     3361 tactagatac attttcttgt aataaaaaat agtcttcatt ttagaagcac atactttagc
     3421 acctgtgtac ttttgattca attcataaac ggtacaccgc tatagcatgt gttttattat
     3481 ttttctggtc tctttatcgt aaatattccc cctaatttag cataatcatt tccggctaaa
     3541 cgagaaacag cctgtaatgc gtgtggattg attttaaaat caccctcata aatactgtca
     3601 tcaatatgat aagttacaat ttcgcctatt attaaatcag ccccatctaa tacatctcca
     3661 agcaatatca tttgcgatag tttacattcg aatctcattt tcgcgtcttt aattcctggc
     3721 gtcttaatcg ttgtagaagt taaaagtgat aattctgtac ggctcaactc actgtcacca
     3781 tatgctaacg gcgctgcagt ctcattaata tcttgaacat tatcttcgtc tgtaatatgc
     3841 acaacaaagt ctccagtccg ctctatattc aaggcagtat cttttctctt acctcctgca
     3901 cgttgaactg caatagcaat cattggcgga tgattattaa ctatattaaa aaaactaaat
     3961 ggtgctgcat ttactgatgc atcttgattt aatgttgtaa caaaagctat aggtcgtgga
     4021 ataattgaac caattaataa tttatagttt tctctagcag ttaatgattg tgcatcaaac
     4081 gtatgcataa tacctacctc ttttcttagt atatctaggt atttctccga tttcggttaa
     4141 tttaaacatc tattctcctc tgaaaatcac ttgtatttat ttagcaaatc ttttgaaata
     4201 tgacacatat gcatatcttc tggatatttt tccaaatgtt gctgatgttc ttcagcactt
     4261 ttaatgtagt tagacagcgg taagacttcc actgcaattt gatctctgtc tttacgtcgt
     4321 tcaatgaact gacgcgcttc aattaagtgg tcatctacac aactatataa acccgttcga
     4381 tacttttctc caatatcatt tccttgtcga ttcacactgt atggatcaat gatttcaaat
     4441 aaataattca tgatgtctgt aattgttaac atacgatcat cgaaatgaag tttgacacat
     4501 tcagcataac catcatacgg actgtctaat ttagagcttc ttccatttgc tcttcctgct
     4561 tctgtatgta taattcctgg tattgttgtg aaaaatgctt caacacccca tagacaacct
     4621 cctgctacat aaacaactgc catatttaca cctcattatc cttttttata tttttaacaa
     4681 ggttatacca tttaataccg ccatgacatg attctgatac accttcatta cgatacccat
     4741 atttttcata aaatgaaatt aatgattctc gacatgttaa cgttacacca tgtcgatgtt
     4801 gattcttagc aagattttca aaatagttta gtaagcgacc tgcaataccc tgaccttgat
     4861 aatttggtgc tacaacaaga cctaacacac taatataacc accttcacta ttatttgtgg
     4921 ggacattttt aaataaatca tcgctaatgt aacgctcttt tatgacagga ccgttgatat
     4981 atccaatcac ttcatcattc ttttcagcta caataaaagt ttcttgaatt tgttcaattc
     5041 tcaatttcaa tgcctctggt gttgcagctt cttccggtga aaaaccaata ttttcaagtg
     5101 caataatttg atctaagtcc tgcatgatta cttttcttaa taccataaaa acacttcctt
     5161 agccctatat atcaaaagta ataccttcat ctatatattc attattttca aactaccttc
     5221 actataaaaa acgagtcttt ttattaaaag ccattcgcct taatcaatta gacaagttgt
     5281 attatacgaa tttgcaaata atcatgatta taattcattt taagcatact caaaaagact
     5341 ggtacatgta taccagtcta attagaaaaa atatatttag ttaaaaccat ttcaaaaacg
     5401 acttcacttt tcctggctta gtcggtctgt ctaaataaac aaaattatca ttgattactg
     5461 aactggcatt tcgaagtaat gcttcaatgt cattcgaata tttcttcaat ttatgattgt
     5521 gaaataattc ttgcatcaaa aatggtcttt ggtcacatga atgtgcatct gaagctacaa
     5581 aatgagccaa attacattct ataaattgta atgataactt ttgaatgctt tttccaaatc
     5641 caccaactaa agaactcgat gttaattgac tcaatgcacc atttgcaaca agttcatata
     5701 atatttctgg atttttggcg atacttctat ttctttcagg atgtgcaatg attggtatgt
     5761 agcctctcga ttgtatttca aaaaacaatt gttttgtata atgtggtact tcgcccgttg
     5821 gaaattcaat tagtaaatat ttcgaacgat taataccttg aatactacca ttatctaagc
     5881 cttgtagaat cgaatctgta attctaattt cttgcccggg aaataattta atatccaatg
     5941 cttgaacttc tggattcgtt cttaactccg ccaatttcac aagcacttgt tgaaatgtat
     6001 tatcatatct cggatgcaaa tgatgaggtg tcgctacaat acttgttaca ccttcatcct
     6061 tagcttgctt taatagtgca atactctttt caattgtttt aggaccatca tctatatcaa
     6121 ctaatatatg gttatgaata tcaatcatga ttcatcagtc ccataatatg catagtaact
     6181 agcactttta tctttaggca ttctatttaa gactacacct aataatttag cacctgttgc
     6241 ttcaataagt tcttttcctt ttttaacttc atctttatta ttattttccg aattaactac
     6301 gtagacaaca ttgccggtaa actttgaaaa taattgcgca tctgtaactg tgttcactgg
     6361 tggcgtatcg ataatgacaa agttataatt catcaataat gtgtcataca aatttgcaaa
     6421 tgcccttgat gtaattaact ctgacggatt cggtgggatt ggcccagacg tcaagacgtc
     6481 taaatcttga atttcagttg agataatact gtcttgataa gttgaccaat ttagcaataa
     6541 acttgaaagt ccttcattgt taggtaaatt aaaaatatag tgctgcgtag gtttacgcat
     6601 atccccgtcc acgattaatg ttttataacc tgcttgtgca tatgcaactg ctaaatttgc
     6661 tgcaattgta gacttacctg cgcctggtgc ctctgaagtg attacaatgc tttgaactgc
     6721 actgtcagga tttgcaaaca taatatttga tcttatgcct cgaaatttct cgctaatagg
     6781 tgactttggt tgttcatgga caattaaact tgatgtactt cttcgtgtat tcgtcatggt
     6841 aattcctcgt aaattaaaat ttttgtattg aacctaaaat aggtaatcct agttgcgatt
     6901 caacatcttc ttccgtctta atacgcttat ctaataattc ttttaagaaa ataatcaata
     6961 ttgctaaaac aataccaaca atgatactga tcactaagtt gacagatact attggagata
     7021 cttttacagc attatcatgt gctgaggaaa gtatcgtaac attatcaaca ctcataattt
     7081 taggcatgtc atgtgcaaaa actttagata ttctattaac aattttgtca gattcagatt
     7141 tattcccagt tgtaactgat acagtaataa tctgagagtt tgtttgattg gttactttta
     7201 aaaacgaatt caactcagct gttgaatact gaccgtcaaa ctctctagat actttatcta
     7261 gaattcttgg acttttgata atttccgtat atgtattaac agactgcaaa ctactttgaa
     7321 cattttggaa cgctaaatca cttgaggact ttttcatgtt cactaatatt tgagtagaag
     7381 cagtatattt gtcaggcata acaaaaaagg ttaatgccgc acttactaca agacatattg
     7441 ccggtaaaat aagcaataat ttaatattct tctttagaat atttaatagt tttactaaat
     7501 caaacttttc tttcatggtt tcctccacat aatcaatcat tgtattcatt atgtatgttt
     7561 tataaatcgt acaattatat ctagtttaac gaccacaaaa catgcacaac tacattttct
     7621 ctaattattt atataaatat tttatcgttt aaaattatat catgattctt gaccattatg
     7681 tataacttat ttatattttt gcacaagata taatattgtc aaacctccaa atatccaaac
     7741 ctattaataa taaaccaaga taccatcgta ctctatcatg gctttcttat aatcgagtag
     7801 aagcatcatc attacttgat tatttactct ttacaacacc gagcgtgccc gtactcggga
     7861 gttcaatacc ttgcgtaatt cgtcactgtg agttgggtta atgataataa agcccacatc
     7921 ttttaaaaag atgtgggtaa tttatataat ttttttacat tttaaactta tataaaaaag
     7981 cacctatgtc atgatttacc atcacatagg cgcttatcaa taaattatta attattactt
     8041 tccatttcat ctaatttata cggatttcct gtaattagat gacaacttat tcttttcagg
     8101 ggaacattac atttttataa tatgttcaaa gacaaactta accattcaca aatataaaga
     8161 ataatattat caaatcattg aacaaatcgt attttgcaac aattgatatt tatattaatg
     8221 tattgcattt aatttataaa attcatatac atcttaatat tctcaatttc gagttgtatt
     8281 gtcaacttta tatagattta aaaaaataat ctcatgtctt tttttacaaa agtaagttaa
     8341 ttattacaaa ctagtaacaa aaattatttc ttcaaaaata tatttagtag cgaatacact
     8401 tcatctttga attgactttt actttcttcc actgctccaa atttttgcga aaaggatgct
     8461 ttcaaatacc aactttcaag aaacagcaat attaaattct gaaagtcttc ttttgtcatc
     8521 tttatctttg attcatcata gaattttgct atctctttac ttaacgattg atttaaatct
     8581 tgtatttgtc cgtaaatatt tccagaaaat tcctcaggcg tattagataa ttgaacgtac
     8641 attctaatat acctttcttc gatgtcgaaa ataaactcaa ataagaattg atataaagca
     8701 tcaattgaat agttcgattt attttgattc atcataataa tattattaag gtaatcaaaa
     8761 cagcatttaa cactttgttc gtaaatactt tttttcgagt caaaatggta atataaactc
     8821 gcttttttta tatttacact tttagctata tcatcaagtg ttgtaccgtc ataccccttc
     8881 tctgaaaata aggttattgc gttgtcaata atcttatcct tcaattttta aaacccccta
     8941 ctgaaaatta atcacactat gttacaggaa aattaagttg caattacaaa tatttccgtt
     9001 taattataac aacaatctat tgcaaattaa aatactatca attaccatat ggcttacaac
     9061 ctaactaacg aaaggtaggt aaagaaattg caatttttta actttttgct tttttatcct
     9121 gtatttatgt ctatttactg gattgtcggt tcaatttatt tctattttac cagagaaatt
     9181 agatattcat tgaacaagaa gcctgacata aatgtggatg aattagaagg cattacattt
     9241 ttacttgcct gttataacga aagtgaaacg attgaagata cattgtctaa tgttctggca
     9301 cttaaatacg agaaaaaaga aattattatc attaatgatg gaagttcaga taatacagca
     9361 gaactcatct ataaaattaa agaaaataat gactttattt tcgtcgattt acaagaaaac
     9421 agaggtaaag ccaacgcact caatcaaggc attaaacagg cttcatatga ttatgtaatg
     9481 tgcttggatg cagatactat cgttgatcaa gatgcaccat attatatgat tgaaaatttc
     9541 aaacatgatc caaaacttgg tgcagttaca ggtaatccta gaattcgaaa taagagttct
     9601 attttaggta aaattcaaac gatagaatat gcaagtttaa ttggctgtat taagcgaagt
     9661 cagacacttg ctggcgcagt caatactatt tcgggtgtct tcactctatt taaaaaaagt
     9721 gcagttgtcg atgttggcta ctgggatact gatatgatta ccgaagatat tgcagtttct
     9781 tggaaattgc atttacgtgg atatcgtatt aagtatgaac cgcttgctat gtgttggatg
     9841 ttggttccag aaacattggg aggtctttgg aagcaacgcg tgagatgggc tcaaggggga
     9901 cacgaagtat tactacgaga cttttttagc acaatgaaaa caaaaaggtt tcctttatat
     9961 attttgatgt ttgagcaaat catctcaatt ttatgggtat atatagtgct tctatattta
    10021 ggctatttgt tcataacagc aaacttctta gactatacat ttatgacata tagtttttca
    10081 atatttctac tatcatcatt tactatgact tttataaacg ttattcaatt tacagtcgca
    10141 ctctttattg atagtcgcta cgagaaaaag aatatggctg gactcatatt tgtaagttgg
    10201 tatccgacag tatactggat tattaacgca gcagtagttc ttgtcgcatt tccaaaagca
    10261 ttaaaacgta agaaaggtgg ttacgcaaca tggtcaagcc cagacagagg gaatacccaa
    10321 cgctaaaatc atcgctaaat attgtaagag aaacagcact tatcgctata tcgtgtgtct
    10381 tttggatata ttgtttagtt gttctactcg tttatattgg tactatattt gaaattcatg
    10441 acgaaagtat caatacaata cgtgttgctt taaacattga aaatactgaa attttagata
    10501 tatttgaaac tatgggcatt ttcgcgatta tcatttttgt attttttaca attagcatat
    10561 tgattcaaaa atggcagaga ggaagagaat cgtgaagtat agaaaattaa taattttagt
    10621 gctgagtatc ttgatcatat tgcctgtaag cacactggat ggtcatcata ttgcaaatgc
    10681 agatgacgat ccacctaaaa aactgaaata taaagaaaat agtgctctgg cattaaatta
    10741 tcaccgtgta agaaaagcga attttctgaa taattttatt tacttctttt ctagtagtaa
    10801 agaaattaaa aattatagtg ttagtcaatc acaatttgaa tctcaaataa aatggctaaa
    10861 atcacatgat gctaaatttt taaccttgaa agaattttta tattacaaga aaaaaggtaa
    10921 gtttccaaaa cgaagtgtat ggattaactt tgatgatatg gatgaaacta tttatgaaaa
    10981 tgcttatcca atcttaaaaa aatataaaat accggcaact gggtttatta tcacaggtca
    11041 tgttggggaa gaaaactttc acaacctcga tatgattagt aaaaaagaac taaaagaaat
    11101 gtataaaact ggtttatggg aatttgaaac acatactcac gatttgcata acttatctaa
    11161 aaataataag tcaaaattaa tgaaagcttc tgaagctaca atcataaaag atttaaacaa
    11221 aagtgaaaaa tatctaacta aaaactttaa aaagtcgcag aaaactatag cctatcctta
    11281 tggcttgatg aatgacgata aattaccggt aatcaaaaaa gctgggttaa aatacggttt
    11341 ttcattagag gaaaaagcag tcactccgaa ctccaatgat tattacatcc ctagaatatt
    11401 aattagtgat gatgcttttg agcatttaat taagagatgg gacggattcc atgaaaaaga
    11461 ttagacttga actcgtatat ttacgtgcta ttatatgtgc aattattatt atcacacatt
    11521 tacttacaca aattacttta aaacatgaaa atttggaggg aggatcctta gtattacaat
    11581 tttacattcg taatattgtg atttttggta caccttgctt tattatcttg tcacagttat
    11641 tgacaacctt gaattaccaa aaagtcacct atagatactt aactacacgc gtaaaatata
    11701 tacttattcc ttacatatta atgggattgt tttacagtta tagtgaatca ttattaacag
    11761 attcaagttt caataaacaa ttcattgaaa atgtcctatt aggtcaatgg tatggctatt
    11821 ttatcgttgt tatcatgcaa ttctttattt tgagttatat catttttaaa attaactata
    11881 acctattcaa tagtaaaata ttattattgt tatcttttat tttacagcaa tcatttttat
    11941 attactttac gaataacaca gcgtttcacg ataccgtgct acactattat ccattaagtg
    12001 aaaacactat aatattcgga tggatttttt atttcttttt aggtgcatat atgggttata
    12061 actacgaacg tgtattaaat ttcttagaac gttatttagt tattatgatt gtattagctg
    12121 tagctactta ttttgtgttt attgcgttag caaatggaga ctattggaac gttaccagct
    12181 tttcatattc attaacacca tataatagta ttatgtttat tgttatcttg ggtatttgca
    12241 cgcattttaa aacaatgtta tttaatacga ttcaaatgat tagtgctttc tcattctttc
    12301 tttatttatt acatccaatc attttagact cattgtttgc atatacaaat atatttgagg
    12361 ataatacaat ggtctttcta gcgatatcac tactattcat tttaggatta tgtataggtg
    12421 tcggtatgat attgcgtgaa ttctatatct ttaggtttat tattggaaaa caaccatata
    12481 aattgaacat taatgcttat taattattaa gctatgttaa aaacacgcgg tgggcgaaat
    12541 cagtttgaat tgactgactt cgtttgaccg cgtgtttaat attgttatac atatattcta
    12601 attgtacatt taaactaaaa aataccgatg ggagtgggac agaaatgata ttttcacaaa
    12661 atttatttcg tcgtcccacc ccaacttgca ttgcctgttg aaattggtgt tccaatttct
    12721 ct
//
LOCUS       DALMNS010000085        12612 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.085, whole genome shotgun sequence.
ACCESSION   DALMNS010000085 DALMNS010000000
VERSION     DALMNS010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 12612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12612
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.085"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(64..690)
                     /locus_tag="O6Y56_002020"
     CDS             complement(64..690)
                     /locus_tag="O6Y56_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HDB5575267.1"
                     /translation="MAKVLYITAHPFNELVSNSMAAGKAFIETYQQQHPEDEVKHIDL
                     FENYIPVIDKDVLTGWGKMSNGETLTDDEQMKVSRLSDILEEFLSADKYVFVTPMWNL
                     SFPPVVKAYIDAISIAGKTFKYSAEGPQGLLTDKKVLHIQSRGGYYTEGPAANFEMGD
                     RYLRTIMTFLGVPSYETIIIEGHNAEPHKTEEIKATSINNAEKLATTF"
     gene            899..1477
                     /locus_tag="O6Y56_002021"
     CDS             899..1477
                     /locus_tag="O6Y56_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDB5575268.1"
                     /translation="MTKRPKRILATIIIFLSLLFTIIYIDDIQKWFNQYTDKLTQNHK
                     GKGHSKWEDFFRGSRITETFGKYQHSPFDGKHYGIDFALPIGTPIKAPTNGKVTRIFN
                     NELGGKVLQVAEDNGEYHQWYLHLDKYNVKVGDRVKAGDIIAYSGNTGKQTTGAHLHF
                     QRMKGGVGNAYAEDPKPFIDQLPDGERSLYDL"
     gene            1861..2958
                     /gene="ugpC"
                     /locus_tag="O6Y56_002022"
     CDS             1861..2958
                     /gene="ugpC"
                     /locus_tag="O6Y56_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HDB5575269.1"
                     /translation="MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKS
                     TTLRMVAGLESITSGDFYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLK
                     LRKVNKKEIEQKVNEAAEILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDE
                     PLSNLDAKLRVQMRTEILKLHKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGT
                     PREIYDAPNCIFVAQFIGSPAMNMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLD
                     KEIILGIRAEDIHEEPIFIQTSPETQFESEVVVSELLGSEIMVHSTFQGMELISKLDS
                     RTQVMANDKITLAFDMNKCHFFDEKTGNRIV"
     gene            2971..4242
                     /locus_tag="O6Y56_002023"
     CDS             2971..4242
                     /locus_tag="O6Y56_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDB5575270.1"
                     /translation="MSKILKCITLAVVMLLIVTACGPNRSKEDIDKALNKDNSKDKPN
                     QLTMWVDGDKQMAFYKKITDQYTKKTGIKVKLVNIGQNDQLENISLDAPAGKGPDIFF
                     LAHDNTGSAYLQGLAAEIKLSKDELKGFNKQALKAMNYDNKQLALPAIVETTALFYNK
                     KLVKNAPQTLEEVEANAAKLTDSKKKQYGMLFDAKNFYFNYPFLFGNDDYIFKKNGSE
                     YDIHQLGLNSKHVVKNAERLQKWYDKGYLPKAATHDVMIGLFKEGKVGQFVTGPWNIN
                     EYQETFGKDLGVTTLPTDGGKPMKPFLGVRGWYLSEYSKHKYWAKDLMLYITSKDTLQ
                     KYTDEMSEITGRVDVKSSNPNLKVFEKQARHAEPMPNIPEMRQVWEPMGNASIFISNG
                     KNPKQALDEATNDITQNIKILHPSQNDKKGD"
     gene            4245..5513
                     /locus_tag="O6Y56_002024"
     CDS             4245..5513
                     /locus_tag="O6Y56_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDB5575271.1"
                     /translation="MTKRNPKLAALLSVIPGLGQFYNKRPIKGTIFFIFFISFISVFY
                     SFLNIGFWGLFTLGTVPKLDDSRVLLAQGIISILLVAFAIMLYVINILDAYRNAERFN
                     RNEEIKDPKARMVATWDKTFPYLLISPGTFLLIFVVVFPLIFMFGVAFTNYNLYNAPP
                     RHTLEWVGLDNFKTLFTIGVWRKTFFSVITWTLVWTLVATTLQIALGLFLAIIVNHPV
                     VKGKKFIRTVLILPWAVPSFVTILIFVALFNDEFGAINNDILQPLLDVAPAWLSDPFW
                     AKVALIGIQVWLGFPFVFALFTGVLQSISSDWYEAADMDGASSWQKFRNITFPHVIYA
                     TAPLLIMQYAGNFNNFNLIYLFNKGGPPVSGQNAGSTDILISWVYNLTFEFNNFNMGA
                     VVSLIIGFIVAIVAFIQFRRTSTFKDEGGL"
     gene            5515..6354
                     /locus_tag="O6Y56_002025"
     CDS             5515..6354
                     /locus_tag="O6Y56_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDB5575272.1"
                     /translation="MTKKKNILKAIGIYSFIAMMFVIILYPLLWTFGISLNPGTNLYG
                     AKMIPDNATFKNYAFLLFDDSSQYLTWYKNTLIVASANALFSVIFVTLTAYAFSRYRF
                     VGRKYGLITFLILQMFPVLMAMVAIYILLNTIGLLDSLFGLTLVYIGGSIPMNAFLVK
                     GYFDTIPKELDESAKIDGAGHMRIFLQIMLPLAKPILAVVALFNFMGPFMDFILPKIL
                     LRSPEKFTLAVGLFNFINDKYANNFTVFAAGAIMIAVPIAIVFLFLQRYLVSGLTTGA
                     TKG"
     gene            6532..7608
                     /locus_tag="O6Y56_002026"
     CDS             6532..7608
                     /locus_tag="O6Y56_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDB5575273.1"
                     /translation="MTIKVGIIGCGGIANGKHMPSLQKVENVEMTAFCDVDISKAACA
                     AKAYGTDNAKVYDDYKALLKDATIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAK
                     TTAEAQKMIDTAKSTGKKLTIGYQNRFRPDSQFLYKSAQRGDLGDIYFGKAHAIRRRA
                     VPTWGVFLDEEAQGGGPLIDIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHDAANA
                     WGSWNPDEFTVEDSAFGFIKMKNGATIILESAWAINSLEVDEAQCSLSGTKAGADMKD
                     GLRIHGEDMGTLYTKHVELENKGVDFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKPEQ
                     AMVVTKILEAIYQSAKSGKAIYFE"
     gene            7633..8673
                     /locus_tag="O6Y56_002027"
     CDS             7633..8673
                     /locus_tag="O6Y56_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDB5575274.1"
                     /translation="MTKLKVGVIGVGGIAQDRHIPALLKLKDTVSLVAVQDINTVQMI
                     DVAKRFNIPHAVETPSELFKLVDAVVICTPNKFHADLSIEALNHGVHVLCEKPMAMTT
                     EECDRMIEAANKNHKLLTVAYHYRHTDVAITAKKAIESGVVGKPLVARVQAMRRRKVP
                     GWGVFTNKALQGGGSLIDYGCHLLDLSLWLLGKDMVPHEVLGKTYNQLSKQPNQINDW
                     GTFDHTKFDVDDHVTSYMTFANRASMQFECSWSANIKEDKVHVSLSGEDGGINLFPFE
                     IYEPRFGTIFESKANVEHNEDIAGERQARNFVNACLGIEEIVVKPEEARNVNALIEAI
                     YRSDLDNKSIQL"
     gene            8728..9696
                     /locus_tag="O6Y56_002028"
     CDS             8728..9696
                     /locus_tag="O6Y56_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HDB5575275.1"
                     /translation="MKIGVFSVLFYDKNFEDMLDYVAESGLDMIEVGTGGNPGDKFCK
                     LDELLENEDKRQAFMKSITDRGLQISGFSCHNNPISPDPTEAKEADETLRKTIRLANL
                     LDVPVVNTFSGIAGSDDTAKKPNWPVTPWPTAYSEIYDYQWNEKLIPYWQGLAEFAKE
                     QDVKIAIELHAGFLVHTPYTMLKLREATNEYIGANLDPSHLWWQGIDPIAAIRILGQA
                     NAIHHFHAKDTYINQENVNMYGLTDMQPYGNVATRAWTFRTVGYGHSPYVWADIISQL
                     IINGYDYVLSIEHEDPIMSVEEGFQKACQTLKSVNIYDKPADMWWA"
     gene            complement(10057..10551)
                     /locus_tag="O6Y56_002029"
     CDS             complement(10057..10551)
                     /locus_tag="O6Y56_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002454321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HDB5575276.1"
                     /translation="MILSILLIFFCIRLVSLKISINHSKQLKADGAVEYGVKNSKFLA
                     ITHVLIYVLAGVEAFINKDTFSFANGIGLVILIFAYIMLFMVIKTLGGIWTLKLFILP
                     NHPIIKSGLYKITKHPNYFLNIIPELIGVLLLTHATYTTILLVPYAYFLYVRIKQEEK
                     LMNI"
     gene            10784..12163
                     /gene="uhpT"
                     /locus_tag="O6Y56_002030"
     CDS             10784..12163
                     /gene="uhpT"
                     /locus_tag="O6Y56_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexose-6-phosphate:phosphate antiporter"
                     /protein_id="HDB5575277.1"
                     /translation="MNFFDIHKIPNKGIPLSVQRKLWLRNFMQAFFVVFFVYMAMYLI
                     RNNFKAAQPFLKEEIGLSTLELGYIGLAFSITYGLGKTLLGYFVDGRNTKRIISFLLI
                     LSAITVLIMGFVLSYFGSVMGLLIVLWGLNGVFQSVGGPASYSTISRWAPRTKRGRYL
                     GFWNTSHNIGGAIAGGVALWGANVFFHGNVIGMFIFPSVIALLIGIATLFIGKDDPEE
                     LGWNRAEEIWEEPVDKENIDSQGMTKWEIFKKYILGNPVIWILCVSNVFVYIVRIGID
                     NWAPLYVSEHLHFSKGDAVNTIFYFEIGALVASLLWGYVSDLLKGRRAIVAIGCMFMI
                     TFVVLFYTNATSVMMVNISLFALGALIFGPQLLIGVSLTGFVPKNAISVANGMTGSFA
                     YLFGDSMAKVGLAAIADPTRNGLNIFGYTLSGWTDVFIVFYVALFLGMILLGIVAFYE
                     EKKIRSLKI"
     gene            complement(12522..>12612)
                     /locus_tag="O6Y56_002031"
     CDS             complement(12522..>12612)
                     /locus_tag="O6Y56_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="HDB5575278.1"
                     /translation="VGFSEYKMFSYHFKKYLQMSPSDYCKQAK"
BASE COUNT         4195 a         1916 c         2491 g         4010 t
ORIGIN      
        1 gggaaaggta tacaataaaa aacactgtat gacgtttgat cagtcacaca gtgtagataa
       61 caattaaaat gttgttgcca atttttcagc attattaata ctagttgctt taatttcttc
      121 agttttatgc ggttcggcat tgtgtccttc aataatgatt gtttcatatg atggcacacc
      181 taagaatgtc ataattgttc ttaaataacg gtcgcccatt tcgaaattag cagcggggcc
      241 ttcagtataa tatccaccac gtgattgaat gtgtaatact tttttgtcag ttagtaaacc
      301 ttgtggtcct tcagcagaat atttaaaagt tttacctgca attgaaatag catcaatata
      361 tgctttaact acaggtggga aagaaaggtt ccacataggc gttacaaata catatttatc
      421 tgcacttaaa aattcttcta aaatgtcact caatcttgaa actttcattt gttcatcatc
      481 agttaacgtt tcgccattac tcatttttcc ccaaccagtt aatacatctt tgtcaataac
      541 tggaatataa ttttcaaata aatcaatatg tttcacttca tcttcaggat gttgttgttg
      601 atatgtttcg ataaatgctt taccagccgc catagaattt gataccagtt cattaaaagg
      661 gtgtgctgta atatataata cttttgccat ttgaaaattc tcctctgttt ctgttatttt
      721 ctaaagtata attattatac tcaatataaa atttaatatc aatcaaaata ttcaaattac
      781 catcattttc ttcatctata tttggcagta ctactaaagt atgagtgcat ttaattatga
      841 aatagttgat ttagaatata tacttaatac ccaaaatata tgaaggatgg atgccactat
      901 gacaaagcga ccaaaacgta ttttggcaac aattatcatt tttctttcac tattatttac
      961 gattatttat atagatgaca ttcaaaaatg gtttaaccaa tataccgata aattgacaca
     1021 aaatcataaa ggaaaaggac actcaaaatg ggaagacttt tttagaggga gtcggattac
     1081 tgagactttt ggtaaatatc agcattcacc atttgatggt aagcattatg gcattgattt
     1141 tgcattgcca ataggtacac caattaaagc gccgacgaat ggtaaagtaa cacgtatctt
     1201 taataatgaa ttaggcggca aggtattaca ggttgccgaa gacaatggag aatatcacca
     1261 gtggtatcta cacttagaca aatataatgt caaagtaggt gatcgagtca aagcaggtga
     1321 tattattgca tattcaggca atacaggtaa acaaacgaca ggcgcacatt tacattttca
     1381 aagaatgaag ggtggcgtag gtaatgcata tgcagaagat ccaaaaccgt ttatcgatca
     1441 gttacctgat ggggaacgta gcctatatga tttgtagtta tagaagagtg accgcagtct
     1501 aaaaattaag caatcattgt gtgagtatga tacttacata atggttgctt ttttcaatga
     1561 aaatcgaaat gctaagtcat acttgtttga tttagatatt acttaaaaaa tgtaagacaa
     1621 ggttgttagc attggcagtg aaatttcgca cgtaaaaaat cattattgtc acactaaaaa
     1681 tagttgtgtg ctatatcaat tctctgtata aaagtttaat tctgatagta atgtaaacgt
     1741 ttacaattta tgattgacat taataatgag tgactatatg atttatgtaa gtatttgtgc
     1801 aaacgttttc acaatgtgta ttgcacaatc aaactgtaaa caaagtatgg gaggcataac
     1861 atggcagaac taaagttaga gcatattaaa aagacgtatg ataacaacaa tactgtagtg
     1921 aaagatttta atctacatat tactgacaaa gaattcattg tatttgttgg accatcggga
     1981 tgtggtaaat caacaacatt acgaatggtt gctggactag agtctatcac atctggagat
     2041 ttttatattg atggggaacg catgaacgat gttgaaccaa agaatagaga tattgcgatg
     2101 gtatttcaaa actatgcatt atatccacat atgactgttt ttgaaaatat ggcatttggg
     2161 ctaaagctac gtaaagtaaa taaaaaagag attgaacaaa aagttaatga agcagctgaa
     2221 atattaggat taactgagta tcttggtcgt aaaccaaaag cgttatctgg tggacagcgt
     2281 caacgtgttg ctttgggcag agctattgtt agggatgcga aagtcttttt aatggatgaa
     2341 ccattatcga atcttgatgc gaagcttcga gtacaaatgc gcacagaaat attgaaatta
     2401 cataagcgac ttaatactac gacaatttat gttacgcatg atcaaactga agcattgacg
     2461 atggctagtc gaattgttgt tttgaaagat ggcgacatta tgcaagtcgg cacacctaga
     2521 gaaatatatg atgcccctaa ttgcatattt gtggcgcaat ttatcggctc accagcaatg
     2581 aatatgttga atgctacagt tgaaatggac ggattgaagg taggaacaca ccattttaaa
     2641 ttacataata aaaaatttga aaagttaaaa gctgctggct acttagacaa ggaaattatt
     2701 ttaggtattc gagctgaaga tattcatgaa gaaccaatat ttattcaaac ttctccagag
     2761 acacaatttg aatctgaagt agttgtatcc gaactgttag gttcagaaat tatggtacat
     2821 agcacattcc aaggaatgga attgatttct aaattagatt caagaacaca agtgatggcg
     2881 aacgacaaga ttacactagc atttgatatg aataagtgtc acttttttga tgaaaaaaca
     2941 ggaaatcgta tcgtctaagg gggagtattc atgtctaaaa ttttaaaatg tatcacgtta
     3001 gccgtggtaa tgttattaat cgtaactgca tgtggcccta atcgttcgaa agaagatatt
     3061 gataaagcat tgaataaaga taattccaaa gacaagccta accaacttac gatgtgggtg
     3121 gatggcgaca agcaaatggc gttttataaa aagattacgg atcaatatac taaaaaaact
     3181 ggcataaaag taaagcttgt aaatattggt caaaatgatc aactagaaaa tatttcgcta
     3241 gacgctcctg ctggaaaagg tccagatatc tttttcttag cacatgataa tactggaagt
     3301 gcctatctac aaggcttagc tgctgaaatc aaattatcaa aagatgagtt gaaaggtttc
     3361 aataagcaag cacttaaagc gatgaattat gacaataagc aactagcatt gccagctatc
     3421 gttgaaacaa cggcactttt ttataataaa aaattagtga aaaatgcacc gcaaacgtta
     3481 gaagaagttg aagctaatgc tgccaagcta actgatagta aaaagaaaca atacggtatg
     3541 ttatttgatg ctaaaaattt ctattttaat tatccgtttt tattcggcaa tgatgattat
     3601 attttcaaga aaaatggcag tgaatatgat attcatcagc taggactaaa ttcaaaacat
     3661 gttgtcaaga atgctgaacg attacaaaaa tggtacgaca aagggtatct tcctaaggca
     3721 gcaacacatg atgtcatgat tggtcttttt aaagaaggaa aagtaggaca atttgtcact
     3781 ggaccatgga acattaatga atatcaagaa acgtttggta aagatttagg agtaacaaca
     3841 ttgcctacag atggtggcaa acctatgaaa ccatttctcg gtgtacgtgg ttggtattta
     3901 tctgaatata gtaaacataa gtattgggct aaagatttaa tgctgtatat cactagtaaa
     3961 gatacattac aaaaatatac agatgaaatg agcgaaatta ctggacgtgt tgacgtgaaa
     4021 tcatctaatc caaatttaaa agtgtttgaa aagcaagcac gtcatgcaga accgatgcct
     4081 aatattcctg aaatgcgaca agtttgggaa ccgatgggca atgcaagcat atttatctca
     4141 aatggtaaga atcctaaaca agcgttagat gaggcgacga atgatataac gcaaaatatt
     4201 aagattcttc atccgtcaca aaatgataag aaaggagatt agttatgacg aaacgtaacc
     4261 ctaaattagc ggcattatta tctgttatac ctggtttggg acagttttat aataaaagac
     4321 ccattaaagg gacgatattt tttatctttt tcatcagttt tatttctgta ttttatagct
     4381 ttttaaatat tggtttttgg ggattgttca cattagggac agtacctaag ttagacgatt
     4441 ctcgtgtctt acttgcacaa ggtattattt ctatcttact cgttgctttt gcaatcatgc
     4501 tatatgtcat taatatttta gatgcatatc gtaatgctga acgatttaat cgtaatgagg
     4561 aaataaagga tccgaaggca cgtatggttg caacatggga caagacgttc ccatacttac
     4621 taatctcacc aggtacattc ttattgatat ttgtagttgt atttccatta atatttatgt
     4681 ttggagtagc atttacaaac tacaatttat acaacgcgcc tccgagacac acattagaat
     4741 gggttggttt agataacttt aaaacgttat tcacaattgg cgtttggcgt aaaacatttt
     4801 tcagtgttat tacttggaca ttagtatgga cgcttgttgc aacgacactt caaattgcat
     4861 tagggctgtt tttggcaatt attgtaaatc accctgttgt caaaggtaag aaatttatcc
     4921 gtacggtatt aatcctacct tgggctgtac catcatttgt gacaatttta atatttgtag
     4981 cgttatttaa tgatgaattt ggtgcgataa ataatgatat attgcaacct ttattagatg
     5041 ttgcaccagc atggttaagc gatccatttt gggcaaaagt ggcattaatc ggcattcaag
     5101 tatggcttgg tttcccattt gtctttgcac tgttcactgg tgtactgcaa agtatttcat
     5161 cagattggta cgaagcagca gatatggatg gtgcgtctag ttggcaaaag tttagaaaca
     5221 tcacattccc gcatgtcatt tacgccacag cgccattgtt aattatgcaa tatgcaggta
     5281 atttcaataa ttttaatctt atttatctat ttaataaagg tggtccacca gtgtcagggc
     5341 agaatgctgg tagtacagat atcttgatat cttgggtgta taatctgaca tttgagttta
     5401 acaactttaa catgggtgca gttgtgtcat taattattgg atttattgtt gctattgtcg
     5461 catttattca attcagacgt acaagtacgt ttaaagatga gggaggttta taagatgaca
     5521 aagaagaaaa acatattaaa agcaatcggt atttacagtt ttatagcgat gatgtttgtc
     5581 atcattttat atccactact gtggacattt ggcatttccc ttaatccagg tacgaacttg
     5641 tatggtgcca aaatgatacc agacaatgca acatttaaaa attatgcatt cttactattc
     5701 gatgacagta gtcaatacct gacttggtat aaaaatacgc ttatcgtagc atctgcaaat
     5761 gcactgttta gtgtgatatt tgtcacgtta acagcatatg ctttttctag atatcgcttt
     5821 gttggtcgta aatacgggct gattacattt ttgattttac aaatgttccc tgtattaatg
     5881 gcaatggtcg caatctatat tttgctaaat acaattggat tattagattc tttatttgga
     5941 ctaacacttg tatatattgg tgggtcaata ccgatgaatg cctttttagt gaaaggttac
     6001 ttcgatacga ttccaaaaga acttgatgaa tctgccaaaa ttgatggtgc tggccatatg
     6061 cgtattttct tgcaaattat gcttccatta gctaagccga ttttagcagt tgttgctttg
     6121 ttcaatttta tggggccatt tatggacttt atattaccta aaatactatt aagaagtcct
     6181 gaaaaattca cattagcagt tggattgttc aactttatta atgataagta tgcaaataat
     6241 ttcacagtgt ttgcagcagg ggcaattatg attgcagtac ctatagcaat cgtattcttg
     6301 ttcttgcaac gctatttagt atcaggttta acaacaggtg cgacaaaagg ttagtttgaa
     6361 attaggagcg gggcagaaat gataaacaac cactaatgaa tttattgtgt tagtggctct
     6421 tacaaattag ccacagctaa tatgtaccta aaaatagcct agaacgttga ttgatgttta
     6481 aggctcgaca tacgcactaa tgacgataaa gatttaaagg aggacgttat gatgacgatt
     6541 aaagttggaa tcattgggtg tggtggtatt gcgaatggca agcacatgcc aagtttacaa
     6601 aaagttgaaa atgttgaaat gaccgcattt tgtgacgtag acatttcgaa agcagcgtgt
     6661 gcggcaaaag catacggtac tgacaatgca aaggtttatg atgattacaa agcattgtta
     6721 aaagatgcca cgattgatgt tatccatgtt tgtacgccaa atgactcgca ttgtgaaatt
     6781 actgtagcag ggttgcatgc cggtaaacat gtgatgtgtg aaaaaccaat ggctaaaacg
     6841 acagcagaag ctcaaaaaat gatagataca gctaaatcaa caggtaaaaa attaacaata
     6901 ggttatcaaa atcgcttcag accagatagt caatttttat ataaatcagc gcaacgtggc
     6961 gacttaggtg acatttattt cggaaaggca catgctattc gtcgtcgagc agtaccaaca
     7021 tggggtgtct ttctagacga agaagctcaa ggtggaggac cattaatcga tatcggtaca
     7081 cacgctttag atttaacgtt atggatgatg gataattatg aaccagaatc agtgatgggt
     7141 tcaacattcc ataaattaaa taaacagcat gatgcggcaa acgcttgggg ttcatggaat
     7201 ccagatgaat ttacagttga agattctgcg tttggcttta ttaaaatgaa gaatggagcg
     7261 acgatcattt tagaatccgc ttgggcgatt aattctttag aagtggatga ggcacaatgc
     7321 tcattatcag gaacgaaagc aggtgctgat atgaaagatg gtctacgtat tcatggtgaa
     7381 gatatgggca cactttatac caaacacgtt gaattggaaa acaaaggcgt cgacttttat
     7441 gaaggtaatg aagtggatga agctgaagaa gaagcaaaag cttggattga tgcagttgta
     7501 aatgatactg aaccagttgt gaaaccggaa caagcaatgg tagttacaaa aattcttgaa
     7561 gcgatttatc agtctgcaaa atcaggcaaa gcaatttact ttgaataaca tcatacggta
     7621 aggaggcaca tcatgacaaa attaaaagtt ggtgtgatag gtgttggtgg tattgcacaa
     7681 gaccgtcata ttccagcatt gctgaaactc aaagacacag tctcattagt tgcagtacaa
     7741 gatattaata cagtgcagat gattgatgtt gcgaagcgct ttaatatacc tcatgcagtt
     7801 gagacaccta gcgagctgtt taaacttgtt gatgcggtgg tcatttgtac acctaataaa
     7861 ttccatgctg atctttctat agaagcattg aatcatggcg tccatgtatt gtgtgaaaag
     7921 ccaatggcaa tgacgacaga agagtgtgat cgcatgattg aagcggctaa taaaaatcac
     7981 aagttattaa cagttgctta tcattatcgt cacacagatg tggcaattac tgctaaaaaa
     8041 gcaattgaat caggtgtggt tggtaaacct ttagtagcac gtgtacaagc gatgcgtagg
     8101 cgtaaagtgc ctggctgggg cgtttttacc aataaagcgt tgcaaggtgg cggtagttta
     8161 atcgattatg gttgccactt gttagactta tctttgtggc tactaggtaa agatatggtg
     8221 ccgcatgaag tgctaggaaa aacatataat caattgagca aacaaccgaa tcaaattaat
     8281 gattggggaa catttgatca cactaaattt gatgtcgatg atcatgttac tagttatatg
     8341 acatttgcca atcgagcaag catgcagttt gaatgttcgt ggtctgcaaa tataaaggaa
     8401 gataaggtac acgttagttt atcaggcgaa gatggcggta tcaatttatt tccatttgaa
     8461 atatatgagc cccgctttgg aactattttt gaaagcaaag ctaatgttga gcataacgaa
     8521 gacattgctg gtgagagaca ggcgcgtaac tttgtcaatg cgtgtttagg gatagaagag
     8581 attgtggtga aaccggaaga agcacgcaat gtaaatgccc ttatagaagc gatttatcgt
     8641 agcgatcttg ataacaagag catacaactt taatgattat tatatataat acaaaattct
     8701 caatataaaa agaaggagtg cttttcaatg aaaataggtg tattttcagt attattttac
     8761 gataaaaatt ttgaagatat gttagattat gtcgcagaat ctggattgga tatgattgaa
     8821 gttggaacag gtggtaaccc aggagataaa ttttgtaagt tagatgagtt gttagaaaat
     8881 gaagacaagc gacaagcatt tatgaagtca atcacagaca gaggcttaca aataagtggt
     8941 ttcagttgtc ataacaatcc aatttctcca gatccgacag aagcgaaaga agccgatgaa
     9001 acgttacgta aaacaatccg tttagcaaat ctattagacg tgccagttgt taatacattt
     9061 tctggcattg caggatcaga tgataccgct aaaaagccta attggcctgt tacaccttgg
     9121 ccaacagcct actctgaaat ttatgattat cagtggaatg aaaagttgat accatattgg
     9181 caaggtttag ctgagtttgc aaaagagcaa gatgtaaaaa ttgccataga gttgcatgca
     9241 ggatttttag ttcatacacc atatacgatg ttgaagttgc gtgaggctac aaatgaatat
     9301 atcggtgcta acttagatcc tagtcattta tggtggcaag gtattgaccc aattgctgcg
     9361 attcgcatat taggccaagc aaatgcaatt catcacttcc atgctaaaga tacgtatatt
     9421 aatcaagaaa atgtaaatat gtatggtcta actgatatgc aaccatatgg taacgttgca
     9481 acaagagcat ggacattccg tacagttggt tatggacata gtccatatgt atgggcagat
     9541 atcataagcc aactaattat taatggatat gattatgtat taagtattga acatgaagat
     9601 cctattatgt cagtagaaga aggtttccaa aaagcttgtc aaactttgaa atctgttaat
     9661 atttacgaca agccagcaga catgtggtgg gcataatacg aactcgaggt tagtctgaag
     9721 tttgtctgaa gtaagactgg tggcagtgtt gaataaatgc atatgtcgcc aagccattgc
     9781 caaaaatttc ataccttaaa tcaagtcatt gtttgtaaag aaggtgtact ttatataagt
     9841 atatagcgat ggtcataccc attcacagta acaatccgaa ccattgaaaa gagtatataa
     9901 gcttttcaat agtgaggtat atgataataa aaaaagcctg ttgtcacaat ggtcatagac
     9961 acgacatact ttaaaggttt ctgaatataa tatttcagaa cgcactttaa agatggacgt
    10021 cgatggcgac taatgtgatg acaggctttc atctttttaa atattcatta atttctcttc
    10081 ttgtttaata cgtacatata agaaatacgc atacggtact aataaaatag ttgtatatgt
    10141 tgcatgtgtt aataataata caccgattaa ttcaggaatg atgtttaaga agtaatttgg
    10201 gtgttttgta attttatata atccagattt aataatagga tggttaggta aaatgaataa
    10261 ttttaatgtc caaataccac ctaaagtttt aataaccata aataacataa tataagcaaa
    10321 gattaatata actaagccaa taccatttgc aaagctaaat gtatctttat taataaatgc
    10381 ctctacacca gccaatacat aaattaaaac gtgtgttatt gctaaaaact tcgaattttt
    10441 aacgccatat tcaactgcac cgtctgcttt taattgtttt gagtgattaa tagatatctt
    10501 taagctgaca agtctgatac agaaaaagat aagtaatata gatagaatca tgatgtcctc
    10561 cgtcattatg tcatatgtat aagcgttgat tttgacaaca taaagtattt tatagataaa
    10621 acttgtcaaa tactattaac tatttattaa ttttagtaca taaatatgtt tctaagtatg
    10681 tgtttatgtt cagtattttg gataatttaa taattttaag gatattaagc gcttacaccg
    10741 acgtgatata tttggcttaa cgaaaatgat tgaggtgaca gagatgaact tttttgatat
    10801 ccataagatt ccgaacaaag gcattccatt atcggtgcaa cgtaaattat ggcttagaaa
    10861 cttcatgcaa gctttcttcg tagtgttctt tgtttatatg gctatgtatt taattcgaaa
    10921 caactttaag gcggcacaac cgtttttaaa agaggaaatt ggattatcta cattagaact
    10981 tggttatatc ggattagcat ttagtatcac gtacggctta gggaaaacgt tacttggtta
    11041 ttttgtcgat ggacgtaaca caaaacgtat tatctcgttc ttacttatct tatctgcgat
    11101 tacagtttta attatgggat ttgtgttaag ttactttggt tctgtaatgg gattattaat
    11161 tgtactttgg ggacttaacg gggtgttcca atcagttggt ggacctgcaa gttattcaac
    11221 gatttcaaga tgggcaccaa gaacgaaacg tggccgatac ttaggattct ggaatacatc
    11281 acataatatc ggtggtgcca ttgcaggtgg tgtcgcactt tggggtgcta atgtattctt
    11341 ccatggaaat gttataggga tgttcatttt cccatcggtg attgcattac ttattggtat
    11401 cgcaacatta tttatcggaa aagatgatcc agaagaatta ggatggaatc gtgctgaaga
    11461 aatttgggaa gagccggtcg ataaagaaaa tattgattct caaggtatga cgaaatggga
    11521 gatctttaaa aaatatatcc tggggaatcc tgttatatgg attctatgtg tttcaaacgt
    11581 ctttgtatac attgtacgaa tcggtattga taactgggca ccgttatatg tgtcagagca
    11641 tttacacttt agtaaaggcg atgcagttaa tacgatattc tactttgaaa ttggtgcttt
    11701 agttgcaagt ttattatggg gctacgtatc agacttatta aaaggtcgtc gtgcaattgt
    11761 agctattggc tgtatgttta tgattacatt tgttgtctta ttctacacaa atgctacaag
    11821 tgtaatgatg gttaacattt cattgtttgc attaggtgcg ttaatctttg gtccgcaatt
    11881 attaattggt gtatcattga ctggttttgt tcctaaaaat gccatcagtg tagcaaacgg
    11941 aatgacaggt tcattcgcgt atctattcgg tgactcaatg gcaaaagttg gtttggcggc
    12001 tattgctgat ccaacacgta acggtttaaa catctttgga tatacattaa gtggatggac
    12061 agatgttttc atcgtcttct atgttgcatt attcctaggc atgattctat taggaatcgt
    12121 tgctttctat gaagaaaaga aaattagaag tttaaaaatc taatatcaat cggattaaaa
    12181 gtatcgccaa tttattgcag tatagttggc aatcctgccc cgacggcatg tgcgtgaaga
    12241 gatgaaagat actgcttcta cccttgcaaa tatatcatct ctatgtctcg gggcagatca
    12301 taattccctg ttatgaagta tccttatttg cccgacttag ggtgactcaa tgaatttact
    12361 ccttacaata aagacatata gcggtgtcga tattgtaggg agtattgttt tatatttaaa
    12421 ctctctaaaa agcggactga aagaaaagtg aaaacttctc tatcagtccg ctttttcata
    12481 gaacaaaatg taggctccat aatcattagt tatgtgctaa tctattttgc ttgcttacaa
    12541 taatcacttg gcgacatttg taaatatttt ttaaaatgat agctaaacat tttatactct
    12601 gaaaagccta ct
//
LOCUS       DALMNS010000086        12433 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.086, whole genome shotgun sequence.
ACCESSION   DALMNS010000086 DALMNS010000000
VERSION     DALMNS010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 12433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12433
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.086"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..1919)
                     /locus_tag="O6Y56_002032"
     CDS             complement(<1..1919)
                     /locus_tag="O6Y56_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDB5575279.1"
                     /translation="MILLQLNHISKSFDGEDIFTDVDFEVKTGERIGIVGRNGAGKST
                     LMKIIAGVENYDSGNVSKIKNLKLGYLTQQMTLNSNATVFEEMSKPFEHIKRMESLIK
                     EETDWLSKHANDYDSDTYKTHMSRYESLSNQFEQLEGYQYESKIKTVLHGLNFSEEDF
                     NKPINDFSGGQKTRLSLAQMLLNEPDLLLLDEPTNHLDLETTKWLEDYLRYFKGAIVI
                     ISHDRYFLDKIVTQIYDVALGDVKRYVGNYEEFIQQRDLYYEKRMQEYESQQAEIKRL
                     ETFVEKNITRASTSGMAKSRRKILEKMERIDKPMLDAKSANIQFGFDRNTGNDVMHVK
                     NLEIGYQTAITKPISIEVSKGDHIAIIGPNGIGKSTLIKTIANQQKALNGDITFGANL
                     QIGYYDQKQAEFKSSKTILDYVWDQYPLMNEKDIRAVLGRFLFVQDDVKKIINDLSGG
                     EKARLQLALLMLQRDNVLILDEPTNHLDIDSKEMLEQALQHFEGTILFVSHDRYFINQ
                     LANKVFDLTIDGGKMYLGDYQYYIEKVEEAEALKAHQEEQSVNVQAHEKSMEQSSYHN
                     QKEQRREQRKLERQISECENEIETLETTILQIDEQLTQPEVYSNPQKANELAIQKQDS
                     EQKLEHAMSKWEELQ"
     gene            2172..2807
                     /locus_tag="O6Y56_002033"
     CDS             2172..2807
                     /locus_tag="O6Y56_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HDB5575280.1"
                     /translation="MSDQVKIPRATLKRLPLYYRFVSSLKSKGIDRVNSKAISDALQI
                     DSATIRRDFSYFGELGKKGYGYNIDSLLDFFKSELSESDMIKIAIVGVGNLGKALLTY
                     NFSIHDDMTITEAFDVKEDVIGQKIGNVIVKDNDELITTLKKEEIDVVILTTPERVAQ
                     KVADELVQAGVKGILNFTPGRINTPSDVQVHQIDLGIELQSLLFFMKNYSE"
     gene            3112..4191
                     /locus_tag="O6Y56_002034"
     CDS             3112..4191
                     /locus_tag="O6Y56_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000266877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HDB5575281.1"
                     /translation="MWMIFSGLIVGGLLGFVMQRTRFCLTGGFRDMYVQKNNKMFYAL
                     LIAITIQSIGLLILTATGILQIPAHSFPILGTIIGSFIFGIGIVLAGGCATGTWYRAG
                     EGLIGSWIALVLYAVTAAITKTGILKPVMDKINQPTNVNSDMSQTTGIPFWGLVVILT
                     IITIFLVVRTLNNKKVRVAVPKLKQRYTGIRYYLFEKRYHPFIAAIVIGLIALLAWPM
                     SASTGRNDGLGITTPSANLVHFLITGETKFIDWGVFLVLGIFIGSYIAARGSREFKWR
                     LPDKITIRNSAIGGICMGFGASVAGGCSIGNGLVETATMTWQGWIALASMIVGVWTMS
                     HFIFVRPMKKVQQQSAKVKQQTQIV"
     gene            4251..4475
                     /locus_tag="O6Y56_002035"
     CDS             4251..4475
                     /locus_tag="O6Y56_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HDB5575282.1"
                     /translation="MIHELGTVGMVCPFPLIEAQKKMATLQSGDELKIDFDCTQATEA
                     IPNWAAENGYPVTNYEQIDNASWTITIQKV"
     gene            4667..5917
                     /locus_tag="O6Y56_002036"
     CDS             4667..5917
                     /locus_tag="O6Y56_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HDB5575283.1"
                     /translation="MNLNDTIFMFLCTLLVWLMTPGLSLFYGGLVQSKNALNTVMQSM
                     AAIVLVTFVWITVGFTISFGNGNLWFGNWEYTFLNHVGFATQEDISPHIPFALFMLFQ
                     MMFCTIAISILSGSIAEKMKFIPYLLFVVIWTALVYSPVAHWVWGGGWINKLGVLDFA
                     GGTVVHITSGVSGLVLAIMIGKGNKHSESTPHNLIITLIGGIFVWIGWYGFNVGSAFT
                     FDNIAMLAFTNTVISASAGAIGWLILEYIFKKTTSLLGLLLGALAGLVVITPAAGYVT
                     YLSATIMAMIGGICCYIVINYIKVKLKYHDALDAFGIHGVGGIIGAVLTAFFQSKKAN
                     PDIENGFIYTGDIHIVLVQILCVTAVVIFSIVMTFIIAKVIKLITPLSVTEQETNIGL
                     DKIVHGEHAYFEGELNRFNKHIRY"
     gene            6100..7050
                     /locus_tag="O6Y56_002037"
     CDS             6100..7050
                     /locus_tag="O6Y56_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDB5575284.1"
                     /translation="MKNISDIAKLAGVSKSTVSRFLNNGSVSKKTSEKLTKIIAEHDY
                     QPNQFAQSLRARQTHLIGAIIPRMNSYAVDETIKGLAKQCQKYESQLILNYTGLNIEA
                     EIQALETLARSKVDGIVLMATDITERHIEVINKMNVPIVIVGQQHEQLHSIVHDDYKA
                     GQIIGEWIGQQGYQQIEVFSVSEKDIAVGIHRKRGLLDQLAKYQIKPNIHETNFTYVE
                     AQKDVANVLENVEQVDAVVGATDTIALAAYKYYSDKKDVMKPHQIYGFGGDPMTQLVS
                     PSIKTIHYNYFEAGQCAMEEIQQMLKKQDMPYSVTVDVNI"
     gene            7199..8683
                     /locus_tag="O6Y56_002038"
     CDS             7199..8683
                     /locus_tag="O6Y56_002038"
                     /EC_number="3.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose-6-phosphate hydrolase"
                     /protein_id="HDB5575285.1"
                     /translation="MTEWTREERYQRIEDVDTEYFKTLKQQVDQSKFRQQFHIQPETG
                     LLNDPNGLIFYKGKYYVSHQWFPLGAVHGLKYWYNYTSDDLINFKAEGPILNPDTKYD
                     SHGVYSGSAFEYNGHLYYMYTGNHRDNHWQRHASQMIARLKEDGSVEKFPKPVISQQP
                     EGYTSHFRDPKVFKYGEKYYAIIGAQNNDQQGRLLLYNTEDIINWHYLGEINTELDDF
                     GYMWECPDYFNVDNQDVILICPQGIESKGNQFKNIYQSGYILGKFDIEKLTYEHENFV
                     ELDNGFDFYAPQTFLDEKGRRVLIGWMGLPEIEYPTDNEGWAHCLTIPRVLNVENGQL
                     KQRPYPALEKLRHNKETALGYANKFTRKLHPYEGKQYELIIDILDNDATEVYFELRTS
                     KTSSTLIAYNKRENKITLDRSDSGLLPTNVEGTTRSTILDTPLKQLQIFVDTSSIEIF
                     CNDGERVLTSRIFPTEDALGIKTSTESGQVYLQFTKYDLKDEHK"
     gene            8680..9639
                     /locus_tag="O6Y56_002039"
     CDS             8680..9639
                     /locus_tag="O6Y56_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HDB5575286.1"
                     /translation="MRRLFSIGEALIDFIPNITNANLKDVQTFTKQIGGAPCNVACTV
                     QKLGQQAYMITQLGNDAFGDSIIETISSIGVDVSKVYRTNEANTALAFVSLTEAGERD
                     FSFYRKPSADMLFEPSFVNDIDVNENDIVHFCSVDLVDSPMRDAHYQLITKTLNANGT
                     VVFDPNVRLPLWDNAEDLRQTIHTVLPLAHIVKVSDEELEFITGIHDENEAIQSLFTG
                     NVTVVIYTMGADGAAVYLKNGINHYHSGYKVKPVDTTGAGDAFIGAVISRILATDVLN
                     LTQLFENEGEEILEFSNRVAAIVTTKYGAINSLPTLQEVEQAF"
     gene            complement(9827..9934)
                     /locus_tag="O6Y56_002040"
     CDS             complement(9827..9934)
                     /locus_tag="O6Y56_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575287.1"
                     /translation="MHCIAGFLILITKLNITCELKNDVTFLCIPIPITT"
     gene            complement(10006..10722)
                     /locus_tag="O6Y56_002041"
     CDS             complement(10006..10722)
                     /locus_tag="O6Y56_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000688500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDB5575288.1"
                     /translation="MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVL
                     EQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKV
                     AAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
                     FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKER
                     IVYFKNKEHCYASVRNVKKI"
     gene            complement(10741..12033)
                     /locus_tag="O6Y56_002042"
     CDS             complement(10741..12033)
                     /locus_tag="O6Y56_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001670396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GHKL domain-containing protein"
                     /protein_id="HDB5575289.1"
                     /translation="METLNSYNFVLFVVTQMILMFTIPALISGIKYSKLDYFFIIVIT
                     SLSLFLYKMFDSASLIILTSFIIILYFVKIKWYSILLIMASQIILYCANYMYIVIYAY
                     VTKISDSILVIFPSFLAIYVTISLLFSYIINRVLKKISTSYLILNKGFLIVISTILLL
                     TFSLFFFYSQINSDEAKVIRQYSFIFIGITIFLSILTFVISQFLLKEMKYKRNQEEIE
                     TYYEYTLKIEAINNEMRKFRHDYVNILTTLSEYIREDDMPGLRDYFNKNIVPMKDNLQ
                     MNAIKLNGIENLKVREIKGLITAKILRAQEMSIPISIEIPDEVTHINLNMIDLSRSIG
                     IILDNAIEASTEIDDPIIRVAFIESENSVTFIVMNKCADDIPRIHELFQESFSTKGEG
                     RGLGLSTLKEIADNADNVLLDTIIENGFFIQKVEIINN"
     gene            complement(12058..12198)
                     /locus_tag="O6Y56_002043"
     CDS             complement(12058..12198)
                     /locus_tag="O6Y56_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic lactone autoinducer peptide"
                     /protein_id="HDB5575290.1"
                     /translation="MNTLFNLFFDFITGILKNIGNIAAYSTCDFIMDEVEVPKELTQL
                     HE"
     gene            complement(12195..>12433)
                     /gene="agrB"
                     /locus_tag="O6Y56_002044"
     CDS             complement(12195..>12433)
                     /gene="agrB"
                     /locus_tag="O6Y56_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="accessory gene regulator AgrB"
                     /protein_id="HDB5575291.1"
                     /translation="LTVISLGVISVYAPAATKKKPIPVRLIKRKKYYAIIVSLTFFII
                     TLIIKEPFAQFIQLGIIIEAITLLPIFFIKEDLK"
BASE COUNT         4223 a         1782 c         2180 g         4248 t
ORIGIN      
        1 tgttgtaatt cttcccattt agacatagcg tgttctaatt tttgttcgct atcttgtttt
       61 tggatagcta attcgtttgc tttttgtgga ttgctataaa cttctggttg ggttaattgc
      121 tcgtctattt gtaagatagt agtctctaaa gtttctattt cattttcaca ctcggatatt
      181 tgtcgttcaa gtttacgttg ttcacgtctt tgttcttttt ggttatgata cgacgattgt
      241 tccatagact tttcatgtgc ttgtacgtta actgactgtt cttcttggtg cgctttcaac
      301 gcttccgctt cctcaacttt ttcaatgtaa tattgataat ctcctaaata catctttccg
      361 ccatcaattg ttaaatcaaa taccttgttt gctaattggt taataaagta acgatcatgg
      421 gaaacaaata gtattgttcc ttcaaaatgt tggagtgctt gctctaacat ttcttttgaa
      481 tctatatcga ggtggttggt aggttcatct aaaataagta cattgtcacg ctgcaacata
      541 agtagtgcta gttgtaaacg tgctttttca ccaccagata aatcattaat tatcttttta
      601 acatcgtctt gtacaaataa gaaacgtcca agaactgcac gaatatcttt ttcattcatt
      661 aacggatatt gatcccacac ataatctaaa atcgttttac tagatttaaa ttctgcttgc
      721 ttttgatcat aataaccaat ttgtaaattt gcgccaaaag taatgtcgcc attaagcgct
      781 ttttgttgat tagcaatagt tttaattaag gtcgattttc caataccatt tggcccaatg
      841 attgctatat gatcgccttt agagacctct atactgatag gtttggtaat tgcagtttga
      901 taaccgattt ctaaattttt tacatgcatg acgtcattac ctgtattccg gtcaaagcca
      961 aattgaatat ttgcactttt ggcatctaac attggtttat caatgcgttc cattttttct
     1021 aaaatcttac gtctactttt tgccattcca cttgttgaag cacgggtaat atttttctca
     1081 acaaaagttt ctaatcgttt tatttctgct tgttgacttt catattcttg cattcgtttt
     1141 tcataatata agtcccgttg ctgtataaat tcctcgtaat taccaacata gcgtttgaca
     1201 tcacctaaag ccacatcata aatttgagta actattttat ctaaaaagta acgatcatgg
     1261 ctgatgatga cgattgcacc tttaaaataa cgtagataat cttcaagcca ctttgtcgtt
     1321 tctaaatcta agtggttagt aggttcatct aaaagtaata aatcaggttc atttaatagc
     1381 atttgagcta aagataaacg tgttttttgg ccaccgctaa aatcattgat aggtttattg
     1441 aaatcttctt cactaaaatt taacccgtga agtactgttt taattttact ttcatattga
     1501 tatccttcta attgttcaaa ttgattcgat aaagattcat aacgggacat atgtgtttta
     1561 tatgtatcac tatcgtaatc atttgcatgt tttgataacc aatctgtttc ttctttgatt
     1621 aagctttcca ttcgtttaat atgttcaaat ggttttgaca tttcttcaaa aactgttgca
     1681 ttagaattta aagtcatttg ttgagttaaa taacctagtt ttaagttttt aatttttgac
     1741 acatttccag aatcatagtt ttctacacca gctataattt tcatcaatgt tgatttaccg
     1801 gcgccatttc ttcctacgat accaattcgt tcaccagttt ttacttcaaa atcaacatca
     1861 gtaaatatat cttcaccatc gaacgatttt gatatatgat tgagttgtaa aagtatcatt
     1921 cgatcttcac ctttcgtctt tcgcaaattt tattaactta tgataaaagt cgtaattatt
     1981 acattaataa ccattttaca gtataaaacg ccgtcttgaa actaagatat ttatttttaa
     2041 aattcaataa tgtataatat ttaggtattc attgtaatca attatttgtt ttttaataat
     2101 ctaacaatta cgctctaact cgtttgaata catagatata attcattcaa acacgaagga
     2161 ggaaatagcg aatgagtgac caagttaaaa ttcctcgagc aactttaaaa cgtttgccgt
     2221 tatattatag atttgtcagt tcattaaaat ctaaaggtat agatcgtgta aattcaaaag
     2281 cgattagcga tgcgttacaa attgactcgg caacaattcg tcgtgacttt tcatattttg
     2341 gcgaattagg taaaaaaggg tacggatata atatagatag tttattggat ttctttaaat
     2401 ctgaactaag cgagagtgac atgatcaaaa tcgcaattgt cggagttggg aacctaggga
     2461 aagctttgct cacatataac ttttcaatac atgatgatat gacgattaca gaagcgtttg
     2521 acgtaaaaga agatgttatt ggccagaaaa tagggaacgt tattgtaaaa gataacgatg
     2581 aattaataac aacattgaag aaggaagaaa tagatgttgt gattctaact acaccagaaa
     2641 gagttgcaca gaaagttgca gacgaactcg tccaagctgg tgtgaaaggt attttaaact
     2701 tcactcctgg tagaattaat acgccttcag atgtgcaagt acatcaaatt gacttaggta
     2761 tagaattaca gtcattatta ttctttatga aaaattacag tgaataaatg tgatgttagc
     2821 tttgaatgat taaccttgtt atatctttaa ttaattatag aacagtctgg gactaagtat
     2881 gtctcaggct ttttctgtta tgtttgaaaa tgaaaggaaa aactgttgtg ttaataaata
     2941 tagtataggt taataaatta acacgtagag atataatgat gaatcgtaat taatcgcatt
     3001 tcttatgtga atataatata aatatcaaaa atattgtgta taaggttgaa aacaagaaaa
     3061 tcatcgccta taatacatac taaacttatc ggaaattagg gggttaggac gatgtggatg
     3121 atttttagtg gcttaattgt cgggggactc ttaggttttg tgatgcaaag aacaagattt
     3181 tgtttaacag gtggctttcg agatatgtat gtgcaaaaga ataataagat gttctatgca
     3241 ttattaatcg ctattactat tcaaagtata ggattattga ttttgacggc aacaggtatt
     3301 ttacaaattc ctgcacatag ttttccaata ttgggaacaa ttataggttc ttttattttt
     3361 ggaattggaa tagtattggc tggagggtgt gcaacaggta cttggtatcg cgctggtgaa
     3421 gggctaattg gtagttggat tgcattagta ttatatgctg ttactgcagc aatcactaaa
     3481 acagggattt taaagccagt aatggataaa attaatcaac caacgaatgt aaatagtgat
     3541 atgtctcaaa caactggcat tccgttttgg ggattagtcg ttatattaac tataatcacc
     3601 atttttctag ttgtaagaac actcaataat aagaaagttc gagttgctgt tccaaaacta
     3661 aagcaacgtt atacaggtat tagatattac cttttcgaaa aacgatacca tccatttatt
     3721 gcagcaattg taattggact tatcgcactc ttagcttggc caatgagtgc atcaactgga
     3781 agaaatgacg gtttaggtat aacaacgcca tcagcaaatt tagtacactt tttgattaca
     3841 ggtgaaacta aatttattga ttggggtgtc tttttagttc taggaatttt cattggttca
     3901 tatattgcag ctagaggatc aagagaattt aaatggcgat tgccagacaa gattacaata
     3961 cgaaacagtg ctattggtgg catatgtatg ggatttggtg cgtcagttgc tggtggttgt
     4021 tctatcggta acggtttggt tgaaacagca acgatgactt ggcaaggatg gattgcgcta
     4081 gcatcaatga tagttggtgt atggacaatg agtcatttta tctttgttcg tccaatgaaa
     4141 aaagtacaac aacaatctgc aaaggttaaa cagcaaacgc aaatagtata gaagattatt
     4201 atgcaaatga tgttgatcaa ataaaagtga ttggaaaagg agaaataatt atgatacacg
     4261 aattaggtac agtaggaatg gtatgtccat ttccgttaat tgaagcgcaa aagaaaatgg
     4321 caacattgca atctggagat gaattaaaaa ttgattttga ttgcacgcaa gcgacggaag
     4381 ctattccaaa ttgggctgca gaaaatggat atcctgtaac aaactatgaa caaattgata
     4441 atgcttcatg gacaattaca attcaaaaag tttaacgtta tcttttttag attctatggc
     4501 tacttccgct actttaaaag cgagtaagta gtcttttttg gttttagttc acgaaattaa
     4561 ttttatatag cgtgatacat tttattccaa aagatgtaat aaaactttac gcatttttgc
     4621 tttttataaa ttgtcagatt attatgaaaa caagggagtg gtaagtatga atcttaacga
     4681 tacgatattt atgtttttgt gtacattatt agtttggcta atgacaccag gattaagttt
     4741 attttatggc gggttagttc aatctaaaaa tgcgctaaat actgtcatgc aaagtatggc
     4801 agcaattgtg cttgttacat ttgtatggat aacagttggt tttacaatta gttttgggaa
     4861 tgggaattta tggttcggaa attgggaata tacttttctt aatcatgtag gttttgcgac
     4921 tcaagaagat attagcccac atattccttt cgctttgttt atgttatttc aaatgatgtt
     4981 ttgtacgatt gcaatttcta ttttatctgg ttcaatcgct gagaaaatga agtttattcc
     5041 ttatttatta ttcgtagtaa tatggactgc tcttgtatac agtccagtag cacattgggt
     5101 ttggggcggc ggttggatta acaaactcgg tgtattagat ttcgccggag gtactgttgt
     5161 tcatattaca tcaggtgttt ctggtttagt attagctatt atgattggaa aaggaaacaa
     5221 acattctgaa tcaacaccac ataatcttat cattacgttg attggcggta tatttgtgtg
     5281 gattggttgg tatggattta atgtaggtag tgcttttaca tttgataata ttgcgatgct
     5341 tgcatttaca aatactgtca tttcagccag tgcaggtgct ataggttggt taattctaga
     5401 atatattttt aaaaagacta caagtttact agggttatta ctaggtgcat tagctggttt
     5461 agttgtcatt acacctgcag caggatacgt gacatatctt agtgcaacaa tcatggcaat
     5521 gattggcggt atctgttgct atatcgttat taattacatc aaggtaaaac taaaatatca
     5581 tgatgcatta gatgcatttg gtattcatgg tgttggtggt attattggtg cagtattaac
     5641 agcctttttc caaagtaaaa aggcaaatcc tgacattgag aatggcttta tttatactgg
     5701 tgatatacat attgtacttg tacaaatatt atgtgtaaca gcagttgtaa tttttagtat
     5761 cgtcatgacg tttattattg cgaaagtaat taaattaatt acaccattat ctgttacgga
     5821 acaagaaacg aatataggat tagacaagat tgttcacggt gaacatgctt actttgaagg
     5881 tgagctaaat agattcaata aacatattcg atattagaat atatatacat agaatattca
     5941 ttgtcctgac atttaactaa aggttgatgt tgggacattt tgttatacaa aagttttatt
     6001 ttgaaatctt tttatgaaag aagcagaaat attatttaaa gcggttacac atatgctaaa
     6061 ataaggctaa gtgtcacaaa taatgatagg tgaataagta tgaaaaatat atctgatatt
     6121 gccaaattgg caggcgtttc aaaaagtaca gtatctagat ttttaaataa tggatctgtc
     6181 agtaaaaaaa caagtgaaaa attaacaaaa attatagcag aacatgacta tcaaccgaat
     6241 caatttgctc aaagtttaag agcgagacaa acacacctta ttggtgccat tatacctaga
     6301 atgaattcat atgcagtaga tgaaacaatc aaaggattgg caaaacaatg ccaaaaatat
     6361 gaatcacaat taattttaaa ttacacagga ttaaatatcg aagcagaaat acaagcgctt
     6421 gaaacattag cacgcagtaa agtagatggt attgttttaa tggctacaga cataacagag
     6481 agacatatag aagtcattaa taaaatgaat gtaccaatcg ttattgttgg tcaacaacat
     6541 gaacaacttc atagtattgt gcatgatgat tataaagcag gtcaaattat aggtgaatgg
     6601 attggtcaac agggatatca acaaattgaa gtgtttagtg tgagtgaaaa agatattgca
     6661 gttggtatac atagaaaacg tggtttactt gaccagttag ctaaatacca aattaaacct
     6721 aatatacatg aaacaaattt tacttatgtg gaagcacaaa aagatgttgc aaatgttttg
     6781 gaaaatgtgg agcaagtaga tgcggttgtt ggagcaactg atacgattgc attagctgcc
     6841 tataaatatt attctgataa aaaagatgtt atgaaaccac atcaaatata tggttttggt
     6901 ggtgacccaa tgacacaatt agtgtctcca tcgataaaaa caattcatta taattatttt
     6961 gaagctggcc aatgcgcgat ggaagagata caacagatgc ttaaaaagca agatatgcca
     7021 tatagcgtca cagtagatgt taatatttag acgctgtatt ttttaaaata aatgtggaac
     7081 cgataccata taagtataaa tggataggtt aaaagttaaa gaacgtaggt aaaatttgct
     7141 ataatagaat ataaattgtt aacagcataa attataaaag gaggactggg taaatattat
     7201 gaccgaatgg actagagaag aacgttatca acgaatcgag gacgttgata ctgagtattt
     7261 taaaacatta aaacaacaag ttgatcaatc aaaatttcgt caacaatttc atatacaacc
     7321 agaaacaggc ttattaaatg atcccaacgg acttattttt tataaaggga agtattatgt
     7381 ttcacatcaa tggttcccgt taggcgcagt acatggctta aagtattggt ataactacac
     7441 gagtgatgac ttaataaact ttaaagctga agggccaata ttaaatccag atactaaata
     7501 tgacagccat ggtgtttata gcggtagcgc ttttgaatat aacgggcatt tatattatat
     7561 gtacacagga aatcatcgag ataatcattg gcaacgacat gcgagtcaga tgatcgcacg
     7621 attgaaagaa gacggctcag ttgaaaagtt tccaaagcca gtaattagcc agcaaccaga
     7681 aggatatacg agtcatttta gagatcctaa agtttttaaa tatggtgaga aatattatgc
     7741 aatcattggc gcacaaaata atgatcagca aggtcgacta ttactttata atactgaaga
     7801 tataattaat tggcattatt taggtgaaat aaatacagag ttagatgatt ttggatatat
     7861 gtgggaatgc ccagattact ttaatgtaga taatcaagat gtcatactta tttgtccaca
     7921 aggtattgaa tcaaaaggca atcagttcaa aaatatttat caaagtggtt atatacttgg
     7981 aaagtttgat attgaaaagt taacatatga acatgaaaat tttgtcgagc ttgataatgg
     8041 ctttgatttc tatgcacctc aaacattttt agatgaaaaa ggccgacgag tactaattgg
     8101 atggatgggg ttaccggaaa tcgaatatcc tactgataat gaaggatggg cccattgctt
     8161 aacaattcct cgtgtattaa atgtagaaaa tggtcaactt aagcaacgtc catatccagc
     8221 gttggaaaaa ttacgtcaca ataaagagac agcattaggc tacgcaaata aatttactcg
     8281 aaaattacat ccgtatgaag gtaaacagta tgaattaatc atagatattt tggataatga
     8341 tgctaccgaa gtgtactttg aattacgtac gtctaagact tcttcaacat taatcgctta
     8401 taacaagcgt gaaaataaaa taacattaga tcgcagcgac agtggtttat tgccgacaaa
     8461 tgttgaaggt acgacgcgta gtacaatatt agacacgcca ttaaagcaat tacaaatttt
     8521 tgttgataca tctagtatag aaattttctg taatgatggg gaacgtgttt tgacatctcg
     8581 aattttcccg acagaagacg cactaggtat taaaacatca acagaatcag ggcaagtata
     8641 tttacaattt actaaatacg atttaaagga tgaacataaa tgagacgtct attttcaata
     8701 ggagaagcgt taattgattt tattccaaat attacaaatg cgaatttaaa agatgttcaa
     8761 acatttacga agcaaattgg tggcgcacct tgtaatgtag cttgtacagt tcaaaagtta
     8821 ggacaacaag cgtatatgat tacacaatta ggtaatgatg catttggaga tagcattatt
     8881 gaaacgatat caagtattgg tgtagatgta tcaaaagtgt atcgcacgaa tgaagcaaac
     8941 actgcgttag cttttgtgag tttgactgaa gcgggcgagc gagatttttc tttttatcgt
     9001 aagccctctg ccgatatgtt atttgaacca agttttgtta atgatattga tgtgaatgaa
     9061 aacgatatag tacatttttg ttctgttgat ttggtcgata gtccgatgag agatgcacat
     9121 tatcaattga ttaccaaaac attaaatgca aatggtactg tcgtatttga tcctaatgta
     9181 agattgccat tatgggataa cgctgaagat ttaagacaaa ctattcatac cgttttgcca
     9241 ttggcgcata ttgtaaaagt ttcagatgaa gaattagaat ttattacagg tattcatgat
     9301 gaaaatgaag ccattcaatc attatttaca ggtaatgtca ctgtagtcat ttatacgatg
     9361 ggagcagatg gtgctgccgt atatttgaaa aatggtatta atcattatca tagtggctat
     9421 aaggtaaaac ctgttgatac aactggggca ggggatgcct ttattggtgc agttattagc
     9481 aggattttag caaccgatgt gttaaattta acacagttat ttgaaaatga aggtgaggaa
     9541 attttagagt ttagcaatcg cgttgctgca atagtgacaa cgaagtatgg tgctattaat
     9601 agtttgccaa cattacaaga ggttgaacaa gcattttaaa taattcattt ataaaacagt
     9661 gtaggaaaca agttgaatct tgtgctacac tgttttttaa aacaaaataa gattcacggg
     9721 gtaggaaatt gtagcatttt atttgaggaa actgtcgatt tcaaatttag tacattttgt
     9781 taaaaattgc gccataggat tgtagagtga aatagaaatt gataaattat gtagtaatag
     9841 gaataggtat acaaagaaac gttacatcat tttttaattc acacgttata tttaattttg
     9901 ttattaaaat taaaaagcca gctatacagt gcatttgcta gttatcttgt taaaatccaa
     9961 caagatttac aattgaatac gccgttaact gactttatta tcttattata tttttttaac
    10021 gtttctcacc gatgcatagc agtgttcttt atttttaaaa tagacaattc gctctttcga
    10081 atctatagat tcaatattat ggcgattgac gacaaagcta ttatgacatc taaagaaacg
    10141 atcatctaat tgactcagtt cttttaaatt accataaaat tcaatttgac ggttatctaa
    10201 atgggcaatg agtctgtgag attttgttga tgattcaaaa aacataatat catcatattg
    10261 aacatacact gaattactgc cacgttttaa ttcaatcgtt tcaacgctat tatctttaga
    10321 caacaattgt aagcgtgtat gtgcagtttc taaacagtct ataattcgag ttcttaattc
    10381 agctggatca tctttaaaaa taaaatccat cgctgcaact ttgtagacaa acgttaaata
    10441 ggtaagttca ctgtgactcg taacaaatat aatgttacca actggatcat gcttacgaat
    10501 ttcactgcct aatttgatac cattaatatc agttgaaagt tgaatatcta aaaagtaaca
    10561 gcctatgtca ttcatatttt tagcttgctc aagcacctca taaggattat cagttgcgag
    10621 ggcaatttcc ataggctttt cttctatcat tatataattt ttaataatgg taaccatgtt
    10681 ttctctttgt tttggatcgt cttcgcaaat gaaaattttc atacattcac atccttatgg
    10741 ctagttgtta ataatttcaa ccttttgaat aaagaaacca ttctcgataa ttgtatctaa
    10801 taagacattg tctgcattat cagcaatttc ttttaaagtt gatagaccta aaccacgacc
    10861 ttcaccttta gtagaaaaac tttcttggaa caattcatga atacgtggta tatcatctgc
    10921 acatttattc ataacaataa acgttactga attttcgctt tcaataaatg caactcgaat
    10981 gataggatca tcaatttcag ttgatgcctc tattgcgtta tcaagaataa taccaatact
    11041 gcgacttaaa tcaatcatat tcaaattaat gtgagttact tcatctggta tttcaatact
    11101 aatcggtata ctcatttctt gtgcgcgtaa aattttagca gtgattaagc ctttaatttc
    11161 acgtacttta agattctcaa taccatttaa cttaatagcg ttcatttgta agttatcttt
    11221 cattggcact atatttttat tgaaatagtc acgtagacca ggcatgtcat cttctcgaat
    11281 gtattctgaa agtgtcgtta agatattgac ataatcatgt cggaacttgc gcatttcatt
    11341 attaattgct tcaatcttta atgtgtattc gtaataggtc tcaatttctt cttgatttcg
    11401 tttgtatttc atctctttaa ggagaaattg tgaaataaca aatgttaata tacttaaaaa
    11461 tatagtgatt ccaataaaaa taaaagaata ctgccttatt actttagctt catccgagtt
    11521 tatttgagaa taaaagaaaa acaatgaaaa agtaagcagt agaatggttg aaataactat
    11581 taaaaaacct ttgtttagta ttagatatga tgtgctaatc tttttgagaa ctctatttat
    11641 tatataagaa aatagcaagc tgattgtaac ataaatagca agaaagcttg gaaatattac
    11701 taatatacta tcagaaattt tggtaacata tgcataaatt actatataca tgtagttagc
    11761 acagtacaaa ataatttgcg aagccataat caacaaaata gaataccatt tgattttgac
    11821 gaaatacaat ataattatga atgaagttaa tattattagg gatgcgctat caaacatttt
    11881 atataaaaat aacgataatg acgtaattac tataataaaa aaataatcaa gtttactata
    11941 tttgattcca cttattaaag cgggtattgt aaacattaat atcatttgag ttactacgaa
    12001 taaaacaaaa ttataactat ttaatgtttc cacctactat cacactctct atttaaatta
    12061 ttcgtgtaat tgtgttaatt cttttggtac ttcaacttca tccattatga agtcacaagt
    12121 actataagct gcgatgttac caatgttttt taaaatccca gtaataaaat caaaaaataa
    12181 gttaaataat gtattcattt taagtcctcc ttaataaaga aaataggtaa taatgtaata
    12241 gcttctatta tgatgcctaa ttgaatgaat tgggcaaatg gctctttgat gataagtgtg
    12301 ataatgaaaa aggttaaact aacaataatc gcataatatt tttttcgttt aataagtcgc
    12361 acaggaatgg gcttcttttt agttgctgca ggagcatata ctgagattac acctaaagaa
    12421 ataactgtta aaa
//
LOCUS       DALMNS010000087        12298 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.087, whole genome shotgun sequence.
ACCESSION   DALMNS010000087 DALMNS010000000
VERSION     DALMNS010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 12298)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12298)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12298
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.087"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            259..567
                     /gene="spn"
                     /locus_tag="O6Y56_002045"
     CDS             259..567
                     /gene="spn"
                     /locus_tag="O6Y56_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="myeloperoxidase inhibitor SPIN"
                     /protein_id="HDB5575292.1"
                     /translation="MKFKKVLVATAMVGVLATGVVGYGNQADAKVYSQNGLVLHDDAN
                     FLEHELSYIDVLLDKNADQATKDNLRSYFADKGLHSINDIINKAKQDGFDVSKYEHVK
                     "
     gene            complement(675..2180)
                     /locus_tag="O6Y56_002046"
     CDS             complement(675..2180)
                     /locus_tag="O6Y56_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKLRK protein"
                     /protein_id="HDB5575293.1"
                     /translation="MRENFKLRKMKVGLVSVAITMLYIMTYGEAEASETSDAIGNHNV
                     NKTEESETASQLVQNNKEINADQTKKNTVKLDPIKPGDQKVTGTTLPNQLILLSIDKK
                     DVSSFDSGNSELVMSKEDGKFEYDLNGRKIVHNQEIEVTSSSTEGLFDDEEDEEVEEA
                     TTEKAGTEEESTEAKATYTTPRYENAYKVPEKQLDKKNGHHQVFIEPITEGSGIIKGH
                     TSVKGKVALSINNKFINFEESVKGGVSKEDTKASSDGIWMPIDEKGYFNFDFKTKRFD
                     NLELKEGNDISLTFAPEDDEDALKPLIFKTKVTSLEDIDKAETRYDHTKVNKVKVLDN
                     VKEDLHVDEIYGSLYHTDKGKGILDKEGTKVIKGKTKFANAVVKVDSELGEAQLFPDL
                     QVNEKGEFSFDSHGAGFRLQNGEKLNFTVVDPITGDLLSNEFVSKEIDIEETPEQKAD
                     REFDEKLENTPAYYKLYGDKIVGFDTNDFPITWFYPLGEKKVERKAPKLEK"
     gene            complement(2202..2903)
                     /locus_tag="O6Y56_002047"
     CDS             complement(2202..2903)
                     /locus_tag="O6Y56_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000769152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein"
                     /protein_id="HDB5575294.1"
                     /translation="MKLKNIAKASLALGILTTGMITTTAQPVKASEYSDLRAVSNDTF
                     NLKTYYTGPNFNYKNLKGYKEGNKVEFVDEITHQLNVIDLKGSDKEKLKDMIDGTLFD
                     VFVVREGTTKDATNYSIGGISNPNSESYIDTLKNVNLKVSKKVSSNSATVASSHFEIN
                     KEEISLKELDFKLRKQLIDNHDLYKTEPKDSKITVTMNNGDYYTFELNKKLQEHRMGD
                     VIDGTKIKEINVELN"
     gene            complement(3305..4414)
                     /locus_tag="O6Y56_002048"
     CDS             complement(3305..4414)
                     /locus_tag="O6Y56_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000072559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDB5575295.1"
                     /translation="MSNTQKKNVPELRFPEFEGEWEERKLGDLIKVNSGKDYKHLDKG
                     DIPVYGTGGYMTSVSEPLSEIDAVGIGRKGTINKPYLLEAPFWTVDTLFYCTPEKEAD
                     ILFILSLFRKINWKLYDESTGVPSLSKQTINKINRLVPTNKEQQKIGEFFSKLDRQIE
                     LEEQKLELLQQQKKGYMQKIFSQELRFKDENGEDYSEWEERRFADIFKFHNKLRKPIK
                     ENLRVKGSYPYYGATGIIDYVDDFIFDGNYLLIGEDGANIITRSAPLVYLVNGKFWVN
                     NHAHILSPLNGNIQYLYQVAELVNYEKYNTGTAQPKLNIQNLKIINVVISTNLEEQQK
                     IGSFLSKLDRQIDLEEQKLELLQQRKKALLKSMFV"
     gene            complement(4407..5963)
                     /locus_tag="O6Y56_002049"
     CDS             complement(4407..5963)
                     /locus_tag="O6Y56_002049"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000028656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HDB5575296.1"
                     /translation="MSITEKQRQQQAELHKKLWSIANDLRGNMDASEFRNYILGLIFY
                     RFLSEKAEQEYADALAGEDITYQEAWADEAYREDLKAELIDQVGYFIEPQDLFSAMIR
                     EIETQDFDIEHLATAIRKVETSTLGEESENDFIGLFSDMDLSSTRLGNNVKERTALIS
                     KVMVNLDDLPFVHSDMEIDMLGDAYEFLIGRFAATAGKKAGEFYTPQQVSKILAKIVT
                     DGKDKLRHVYDPTCGSGSLLLRVGKETQVYRYFGQERNNTTYNLARMNMLLHDVRYEN
                     FDIRNDDTLENPAFLGHTFDAVIANPPYSAKWTADSKFENDERFSGYGKLAPKSKADF
                     AFIQHMVHYLDDEGTMAVVLPHGVLFRGAAEGVIRRYLIEEKNYLEAVIGLPANIFYG
                     TSIPTCILVFKKCRQQDDNVLFIDASNDFEKGKNQNHLSDVQVERIIDTYKRKETIDK
                     YSYSATLQEIADNDYNLNIPRYVDTFEEEAPIDLDQVQQDLKNIDKEIAEIEQEINGY
                     LKELGVLKDE"
     gene            complement(6215..6898)
                     /locus_tag="O6Y56_002050"
     CDS             complement(6215..6898)
                     /locus_tag="O6Y56_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL10"
                     /protein_id="HDB5575297.1"
                     /translation="MKFTALAKATLALGILTTGTLTTEAHSSHAKQNQESVNKHDKEA
                     LYRYYTGKTMELKNINALKHGKNNLRFKYRGMKIQVLLLGNDKNRFQQRSYKGLDVFF
                     VQEKRDKHDIFYTVSGVIQTNKTSGVVSSPILNVTKEKGEDAFVKGYPYYIKKEKITL
                     KELDFKLRKHLIEKYGLYKTISKDGRVKISLKDGSFYNLDLRSKLKFKYMGEVIESKQ
                     IKDIEVNLK"
     gene            complement(7264..7962)
                     /locus_tag="O6Y56_002051"
     CDS             complement(7264..7962)
                     /locus_tag="O6Y56_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL9"
                     /protein_id="HDB5575298.1"
                     /translation="MKFTALAKATLALGILTTGVFTAESKAVHAKVELDETQRKYYIN
                     MLHQYYSEESFEPTNISVKSEDYYGSNVLNFNQRNKAFKVFLLGDDKNKYKEKTHGLD
                     VFAVPELIDIKGGIYSVGGITKKNVRSVFGFVSNPSLQVKKVDAKNGFSINELFFIQK
                     EEVSLKELDFKIRKLLIEKYRLYKGTADKGRIVINMKDEKKHEIDLSEKLSFERMFDV
                     MDSKKIKNIEVNLN"
     gene            complement(8339..9037)
                     /locus_tag="O6Y56_002052"
     CDS             complement(8339..9037)
                     /locus_tag="O6Y56_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL8"
                     /protein_id="HDB5575299.1"
                     /translation="MKFTAIAKAIFVLGILTTSVMITENQSVNAKGKYEKMNRLYDTN
                     KLHQYYSGPSYELTNVSGQSQGYYDSNVLLFNQQNQKFQVFLLGKDENKYKEKTHGLD
                     VFAVPELVDLDGRIFSVSGVTKKNVKSIFESLRTPNLLVKKIDDKGGFSIDEFFFIQK
                     EEVSLKELDFKIRKLLIKKYKLYEGSADKGRIVINMKDENKYEIDLSDKLDFERMADV
                     ISSEQIKNIEVNLK"
     gene            complement(9376..10071)
                     /locus_tag="O6Y56_002053"
     CDS             complement(9376..10071)
                     /locus_tag="O6Y56_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL7"
                     /protein_id="HDB5575300.1"
                     /translation="MKLKTLAKATLALGLLTTGVITSEGQAVHAKEKQERVQHLYDIK
                     DLHRYYSSESFEFSNISGKVENYNGSNVVRFNQDGQNHQLFLLGEDKEQYKQGLQGQN
                     VFVVKELIDPNGRLSTVGGVTKKTNQSSETNTPLVVNKVYGGDLHASIDSFSINKEEV
                     SLKELDFKIRKQLVEKYGLYQGTTKYGKITFNLKDGEKKEIDLGDKLQFERMGDVLNS
                     KDINKIEVTLKQI"
     gene            complement(10504..11208)
                     /locus_tag="O6Y56_002054"
     CDS             complement(10504..11208)
                     /locus_tag="O6Y56_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL5"
                     /protein_id="HDB5575301.1"
                     /translation="MKMTAIAKASLALGILATGTITSTHQTVNASEHEAKYENVTKDI
                     FDLRDYYSGASKELKNVTGYRYNKGGKHYLIFDKNRKFTRVQIFGKDIERFKARKNPG
                     LDIFVVKEAENRNGTVFSYGGVTKKNQDAYYDYINVPRFQIKRDEGDGIATYGRVHYI
                     YKEEISLKELDFKLRQYLIQNFDLYKKFPKDSKIKVIMKDGGYYTFELNKKLQTNRMS
                     DVIDGRNIEKIEASIR"
     gene            complement(11572..>12298)
                     /locus_tag="O6Y56_002055"
     CDS             complement(11572..>12298)
                     /locus_tag="O6Y56_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="superantigen-like protein SSL4"
                     /protein_id="HDB5575302.1"
                     /translation="EAPKQTPNATTPSSTKVETSQPTPNAPTPPSTKVETPQSPTTKQ
                     VPTEINPKFKDLRAYYTKPSLEFKNEIGIILKKWTTIRFMNIVPDYFIYKIALVGKDD
                     KKYGEGVHRNVDVFVVLEENNYNLEKYSVGGITKSNSKKVDHKAGVRITKEDKKGTIS
                     HDVSEFKITKEQISLKELDFKLRKQLVENHNLYGNVGSGKIIIKMKNGGKYTFELHKK
                     LQKDRMADVIDGTNIDSIEVNIK"
BASE COUNT         3599 a         2235 c         1597 g         4867 t
ORIGIN      
        1 caatttaatt tcttaattaa atttgtactt attattatgt tgcattattt tttattattg
       61 tttcatttga tttaaaccct ttttgtaatc aaggttttag taggaaaatc cataagcatc
      121 gcactaaaga ttaattgctt tttagcaata tttgtcactt taactattta ttaaatatca
      181 ttaaatcgac ttaataaacg taattttctt aatattcagt attatgatgg agttacaatt
      241 tttagaggag tgatagatat gaaatttaaa aaggttttag tagctacggc aatggtaggt
      301 gttttagcaa ctggcgttgt tggatatggt aatcaagcag atgcgaaagt gtattctcaa
      361 aatggtctcg tactacatga tgatgcaaac ttcttagaac atgaattaag ctatatcgat
      421 gtgttattag ataagaatgc tgaccaagct acaaaagaca acttaagatc atacttcgcc
      481 gataaaggac tacattcaat caatgacatt atcaacaaag ccaagcagga cggctttgat
      541 gtttcaaaat atgaacacgt aaaataaatt caataacgct ttgtaacaaa gcacaaaaaa
      601 acagctcaat gacgtagaag tcagtgatta actcactagt ttcattacat cattaagctg
      661 ttttatttta ttaattattt ttctaatttt ggtgccttac gttcaacttt cttttcacct
      721 aatggataga accaagtgat tgggaaatca ttagtatcga aaccaactat tttatcgccg
      781 tataacttgt agtatgcagg tgtattttca agtttttcgt caaactcacg atccgctttt
      841 tgttcaggtg tttcttcaat atcaatctct ttagaaacaa actcattact taacaagtca
      901 cctgtaatag gatcaaccac tgtgaagttt aatttttctc cattttgtaa tctaaaacca
      961 gcaccatgtg agtcaaagct aaattcacct ttttcattta cttgtaaatc agggaataat
     1021 tgtgcttcac ctagttcaga gtctaccttc actactgcat tcgcgaattt agtctttcct
     1081 ttaattactt tagtaccttc tttatcaaga atacctttac ctttgtctgt atgatataag
     1141 cttccatata tttcatcaac atgtaaatct tctttaacat tatctaaaac tttcactttg
     1201 ttgactttag tatggtcata tctagtttct gctttatcaa tatcttccaa acttgttact
     1261 ttagttttga aaattaaagg ttttaatgca tcttcatcat cttccggcgc aaatgttaat
     1321 gagatatcat taccttcttt taactctaaa ttatcgaaac gtttcgtttt gaaatcaaag
     1381 ttaaagtagc ctttttcatc aataggcatc cagataccat ctgaactagc tttagtatct
     1441 tctttactaa caccgccctt aacgctctct tcaaaattaa taaatttatt attaatagaa
     1501 agtgcaactt taccttttac agaagtatga cctttaataa tacctgaacc ttcagtaatt
     1561 ggttcgatga aaacttgatg atgtccattt ttcttatcta attgcttttc aggcacttta
     1621 taggcatttt catatcgagg cgtagtatat gtagctttag cttctgtact ttcttcctca
     1681 gtaccagctt tttcagttgt agcttcttcc acttcttcat cctcttcatc gtcaaataaa
     1741 ccttccgttg aagatgaagt tacttcaatc tcttggttat ggacaatttt tcttccgttt
     1801 aagtcatact caaattttcc atcttccttt gacatcacta gctcactatt tccactatca
     1861 aatgaactca catctttttt gtctatgctt aataaaatta attgatttgg taatgtagta
     1921 cctgtgactt tttgatctcc tggcttgata ggatccaatt tgacagtatt cttttttgtt
     1981 tgatccgcat ttatttcttt attattttga acaagttgtg acgcagtttc agattcttct
     2041 gttttattca cattgtgatt tccaatagca tcactagttt ctgatgcttc tgcttcgcca
     2101 tatgtcatga tatataacat agtaattgca acagatacta aaccgacttt cattttacgt
     2161 aatttaaaat tttccctcat gatttactcc ctcgaatatt attagtttaa ttcaacatta
     2221 atttctttta ttttagtacc atcgattaca tcacccatgc ggtgttcttg taacttttta
     2281 tttaattcaa atgtgtaata gtctccatta ttcatagtaa ctgtaatttt gctgtcttta
     2341 ggttctgttt tataaagatc atgattatca attaattgtt ttcttaattt aaaatctaat
     2401 tcttttaatg aaatttcttc tttattaatt tcaaaatgcg atgatgctac tgtagctgaa
     2461 tttgagctta ctttttttga aacttttaga tttacatttt tgagtgtatc tatatagctt
     2521 tcactattcg gattactaat tccacctatt gaataattag tagcgtcttt agttgttcct
     2581 tctctaacta caaacacatc aaacagagta ccatctatca tatcttttaa tttttcttta
     2641 tctgaacctt tcaaatcaat tacatttaat tggtgagtaa tctcatctac aaattcaact
     2701 ttgttccctt ctttataacc ttttaaattt ttataattaa agttaggacc agtataatat
     2761 gtttttaaat taaatgtatc atttgatact gctcttaaat cgctgtactc gcttgctttt
     2821 actggctgag cagtagttgt aatcatccct gttgttaaaa tccctagtgc taaacttgct
     2881 ttagcaatat tttttaattt cataattcta tgctcccaat ttttagtcta tttgatttat
     2941 tctattacgc aatacgaaca atcctcattc attataatga gcaatggtcg tgcttcacat
     3001 taaacttact ttaactaaaa attaatcatt attaagtaat ttaataaata gttaactaat
     3061 atcattcaat tcctatcgat ctactctctt ttatttacga ataacacttt atctcaactt
     3121 aatctttatt tatctactta ttctgtacac aatttcgaca caaaaaagac actgggcttt
     3181 cacagtgtct aaatttaatg ttcgttttta atttacttta attttgtagc tttaataatt
     3241 aaaaatcact tattaatcga gtaataaaac atcaccattt cctataaaat aaactcttac
     3301 agatttaaac aaacatcgat ttaagtaagg ctttttttcg ttgttgaagt aattcgagtt
     3361 tttgttcttc taaatcgatt tgacgatcaa gtttacttaa aaagcttccg attttttgtt
     3421 gttcttctaa attcgttgaa attacaacat taataatttt taaattttga atgtttaatt
     3481 taggctgagc agttccagta ttgtattttt cataattaac taattctgca acttgataca
     3541 agtactgtat atttccattt aaaggagata atatatgagc atgattattt acccaaaact
     3601 ttccatttac taagtacact aggggtgcac ttctagtaat aatatttgca ccatcttctc
     3661 caataagtaa ataattcccg tcaaatataa agtcgtcaac gtaatcaata atacctgtag
     3721 caccataata tggataagaa ccctttactc ttaaattttc tttaattggc tttcttagtt
     3781 tattatgaaa tttaaatata tcagcaaatc ttctctcttc ccactccgaa taatcttcac
     3841 cattctcatc tttgaatcgc agttcctgtg agaaaatttt ctgcatatag ccttttttct
     3901 gttgttgaag taattcaagt ttttgttctt ctaattcaat ttgtcggtcg agtttgctga
     3961 agaactcgcc tattttttgt tgttctttat ttgtagggac aagtctattt attttattaa
     4021 tggtttgctt gcttaagctt ggcacacctg ttgattcatc gtataatttc caatttattt
     4081 ttctaaataa acttaatata aatagtatgt ctgcttcttt ttcaggtgta caataaaaca
     4141 atgtatccac cgtccaaaac ggcgcctcaa gcaaatatgg tttgtttata gtcccttttc
     4201 tcccaatacc aacagcatca atttcactta gtggttctga aacacttgtc atataaccgc
     4261 cagtaccata gactggtata tcgcctttat ccaaatgttt ataatctttt ccagaattaa
     4321 cttttataag atcccctaac ttcctttctt cccactcgcc ttcaaactct gggaacctca
     4381 actctggcac atttttcttt tgtgtattac tcatctttca acaccccaag ttctttcagg
     4441 tatccattga tttcttgttc gatttctgcg atttctttgt cgatattttt caaatcttgt
     4501 tggacttgat ctaaatcaat cggggcttct tcttcgaatg tatcaacata tctcggtata
     4561 tttaggttgt aatcgttatc ggcaatctct tgtaatgtcg cgctgtagct atatttatca
     4621 atcgtttctt tacgcttata tgtgtctata atacgttcga cttggacatc gcttaaatgg
     4681 ttttgatttt ttcctttttc aaaatcattg gatgcatcaa taaatagtac gttgtcgtct
     4741 tgttggcgac attttttaaa cactaaaata catgttggaa tacttgtccc atagaaaata
     4801 ttcgctggta agccaatcac ggcttctaag tagttctttt cttcgattaa ataacgacga
     4861 atcacgcctt ctgcagcccc acggaataag acaccatgtg ggagtacaac ggccatggta
     4921 ccttcatcat ctaggtaatg taccatgtgt tgaataaagg caaagtctgc tttagacttt
     4981 ggcgcaagct tgccgtaacc actgaatcgt tcgtcatttt caaattttga gtctgctgtc
     5041 catttcgcac tgtatggtgg gttcgcaata accgcatcaa atgtatgtcc taaaaaggct
     5101 ggattttcca acgtgtcatc attacggata tcgaaatttt cataacgaac atcatgtaat
     5161 aacatattca tgcgtgctaa gttgtatgtg gtattgttac gttcttgtcc gaaataacga
     5221 tacacttgcg tttctttacc tacacgtaac aataatgaac ctgaaccaca tgttgggtca
     5281 tatacgtgac gtaatttatc tttaccgtct gtgacaatct tcgccagtat cttagatact
     5341 tgttgtggtg tatagaactc gcctgctttt ttacctgctg tcgccgcaaa gcgcccgatc
     5401 aggaattcat atgcatcacc taacatatca atttccatgt cactgtgaac gaatggtaaa
     5461 tcatcaaggt taaccataac tttggaaatt aacgcagtac gttctttgac attgttacct
     5521 agtcgcgttg aacttaggtc catatcactg aacagtccga taaagtcatt ttcactttct
     5581 tcacctagtg ttgatgtttc aactttacga attgccgtcg caagatgttc tatatcgaaa
     5641 tcttgcgttt caatttcacg aatcatcgca ctgaataaat cttgcggttc aatgaagtaa
     5701 ccgacttgat caattaattc tgcttttaaa tcttcacgat atgcttcatc tgcccatgcc
     5761 tcttgatacg tgatgtcttc acctgccaag gcatctgcgt attcttgttc tgctttttca
     5821 gataagaagc gatagaaaat caagcctaaa atgtaattac ggaattcact cgcatccata
     5881 ttccctctta aatcatttgc aatcgaccat aattttttat gtaattcagc ttgttgctga
     5941 cgttgttttt cagtaataga catgtgattc ctccgccttt gaataagtaa tttatctctt
     6001 tgtgtaatag atttattata acatttggtt atgtcgcgat gtggagaatt ttgaggttgg
     6061 ttgtggaaat ttttatattc atggagattg ggataggata aaccaaaaca gcttaacgac
     6121 gatatcgatt gatgcatcct ttttataagg tatgcgtatc aatttacttt tcatcgttaa
     6181 gccacttcaa ttacttttta ttattcgtaa ttatttactt taagttaact tcaatatctt
     6241 taatttgttt gctttctatg acttccccca tatatttaaa ttttaattta gatcttaaat
     6301 caaggttata aaaactgcca tctttcaagc taattttaac cctaccatct tttgaaattg
     6361 ttttataaag tccatatttt tcgattagat gctttctcaa cttaaaatct aactctttta
     6421 atgttatttt ttctttttta atataataag ggtacccttt cacaaaagca tcttcaccct
     6481 tttcttttgt aacatttaat attggggaac tgacaactcc agatgtttta ttcgtctgta
     6541 ttacaccact aacagtataa aatatgtcat gcttgtctct tttttcttga acaaaaaaca
     6601 catctaagcc cttataacta cgctgttgaa atctattttt atcatttcca agcagcaata
     6661 cttgaatctt catacctcta tacttaaaac gcaagttatt tttaccatgc ttcaaagcat
     6721 taatgttttt caattccata gtctttccag tgtagtatcg gtataatgct tccttgtcat
     6781 gtttgtttac tgactcttga ttttgttttg catgactgga atgagcctct gttgttaaag
     6841 ttccagttgt taaaattcct aaagctaacg ttgcttttgc taatgctgta aatttcatat
     6901 ttatttgctc caatcttaat atattggatt gttttcatta cgtaatttga atcatacatt
     6961 attattataa cgtgcatcat ttcatacgat aattaacctc gatttaaata tacttgaatt
     7021 attcttaatg aaaaacaaat atattttaat gttcaggtta aatgactttc attatttcat
     7081 ttaggtgttt tactagggca tcgtttacta caactacttt tgttatgctg ttctgctctt
     7141 tgaattacaa aaacaactta acaacaataa tgtatttaac acagttcctt atataaggac
     7201 acggatgtca attcacattt tgtcgttaag tcgcttctta agctattatg ctattaactc
     7261 gaactaattt aaatttactt caatgttttt aattttctta ctgtccatta catcaaacat
     7321 acgttcaaaa cttaattttt cacttaaatc aatttcatgc tttttttcgt ctttcatatt
     7381 gataacaatt ctacctttat ctgccgttcc tttgtacaat ctatattttt caattaatag
     7441 ttttcttatt ttaaagtcca gttccttcaa tgatacttct tccttttgaa taaaaaacaa
     7501 ctcgtttatc gaaaagccat ttttagcatc aactttttta acttgtagac ttggattact
     7561 tacaaatcca aacactgatc tcacattttt ctttgttata ccgccaacgc tatatatgcc
     7621 accttttata tctattaatt caggtactgc aaagacatca aggccatgtg ttttttcttt
     7681 atatttattt ttatcgtcac caagtaaaaa tactttaaaa gctttatttc gttggttaaa
     7741 gtttaaaaca ttagagccat agtaatcttc gcttttaaca ctaatgtttg ttggttcaaa
     7801 actttcttca gaatagtatt gatgtagcat attgatataa tatttgcgct gtgtctcatc
     7861 aagttctact ttcgcgtgaa cagctttact ttctgctgta aacacacctg tagttaatat
     7921 tcctaatgct aatgttgctt ttgctaatgc agtaaatttc atatttattt gctccaatct
     7981 tgatatattg gattgttatt attacgtaat ttgaactatc tgtctttatt ataaggtgca
     8041 tcaaaacaga ctgacattaa cgctcattta aataaacttg aatcattatt aatgaaaatc
     8101 aaacgtattt taacattcgt attaactgat ttttaatagc agcataaata ttttttggtg
     8161 aatcattgtt cattccgatt agttttaaat cttaagctat tcgttataaa gtgtacaaaa
     8221 aagcagctta ataacgtagt caatgttcga tatgttttta ttattaaaac acgtatcaat
     8281 atcattaaac atggagttat taaaccgctt cttaagcttt tattctatat atcattgatt
     8341 atttcaaatt cacttcgatg ttcttaattt gttcactact aatgacatct gccatacgct
     8401 cgaaatctaa tttatcactt aaatcaattt catacttatt ttcatctttc atattaataa
     8461 caattctacc tttatcagct gacccttcat acagtttgta ttttttaatc aatagttttc
     8521 ttattttgaa atcaagttcc tttaatgata cttcttcctt ttgaataaag aaaaattcat
     8581 caatcgaaaa accgccttta tcgtctattt ttttaactag taagttcggc gttcttagag
     8641 actcaaatat tgactttacg tttttcttcg ttacaccact aacgctaaat attctaccat
     8701 ctaaatctac taattctggt accgcaaaga catcgaggcc atgcgttttt tctttatatt
     8761 tattttcatc ttttcccaat aaaaacactt ggaacttttg attttgttgg ttaaaaagca
     8821 aaacgttaga gtcataataa ccttgacttt ggccactaac atttgttaac tcataactag
     8881 gtcctgaata gtattgatgt aacttgtttg tatcatataa acggttcatt ttttcatact
     8941 ttccttttgc attaaccgat tgattttctg ttatcattac acttgttgtt aatattccta
     9001 atacaaatat cgctttagct atcgctgtaa atttcatatt catatgctcc aatcttcata
     9061 tattggattg cttttattac gtaatttgaa taatacacat ttattataaa gggcattgag
     9121 acagactgac attaacgctc gtttaattaa acttaaatca tggttaatga agttctaatt
     9181 aatattcaat ggacaccact ttcagaagta atgtgaattt ttagtatgct cataccctgc
     9241 gttataaaac agaaaaacag cctaacgaca ctgttgattt agatacgccc ctttttggag
     9301 gatgtacgta tttattcaac atttcatcgt taagctgctt caaatttatt actttagagt
     9361 cattgattac ttactttaaa tttgtttcaa agtcacttca atcttattaa tatccttact
     9421 attcaacaca tcacccatgc gctcgaattg caatttatca cctaaatcaa tttctttctt
     9481 ttctccatct ttcaaattga aagtgatctt accgtattta gtcgtacctt gatataaacc
     9541 gtatttttca actaattgct ttctaatttt gaaatcaagt tctttcagtg aaacttcttc
     9601 tttattaatt gaaaatgagt caattgatgc atgtaaatct cctccataca ctttattaac
     9661 tactaaaggt gtattagttt cagaagattg gttagttttc ttcgttacac caccaacagt
     9721 agatagtcta ccgtttggat caattaattc ttttaccaca aagacatttt gaccttgaag
     9781 tccttgttta tattgttctt tatcttctcc taataagaat aattggtgat tttgaccatc
     9841 ttggttaaag cgtacaacgt tagaaccgtt ataattttca accttaccac taatattact
     9901 gaattcaaaa ctttctgatg agtagtatcg atgtaagtct ttaatatcat ataaatgttg
     9961 tactctctct tgcttttctt ttgcgtggac tgcttggcct tctgatgtaa tcacaccagt
    10021 agttaataag cctaatgcca atgttgcttt agctaacgtt tttaatttca tagtactatt
    10081 ctcccaatct atttataaat tttgtcttaa tatattttta tatgattaat tcaattacgt
    10141 aatacgaaca atctactatc attatataag tgagatactg cgctatgaat taacctcttt
    10201 ttaactattt ttgaaccaac gttaagttag ttaatgaaat cctaacagta ttaattattt
    10261 tttataacac aatgctaatt ttttaactat tcacactttc cctcaattta attatgtttt
    10321 ccacattgtt tcatgtcact aaaaggacaa cgcgcgacta taggtatcaa ccgtttttcc
    10381 aaaattttga tcatgaaccc gcttctcatt ttcatctcgc caacacaaaa aagaagctaa
    10441 gcaacttatg ttgcctaact cctctatact atccatattt tacattatcc atatttcatt
    10501 gaattatcta atgctggctt ctattttttc aatatttcta ccgtcaataa cgtcactcat
    10561 gcgatttgtt tgtaattttt tattaagttc aaacgtataa tagccgccat ctttcattat
    10621 cacttttatc ttactatctt taggaaactt tttatacaga tcaaaatttt gaattaaata
    10681 ctgtctcaat ttaaagtcga gttctttaag tgaaatctct tctttataaa tgtagtgtac
    10741 tctaccgtac gtagcaatac cgtcaccttc atctctcttg atttgaaatc ttggtacgtt
    10801 tatataatca taataagcgt cttgattttt cttagtgaca ccaccatatg aaaacactgt
    10861 gccattacgg ttttccgctt ctttaacaac aaatatgtct aatcccggat ttttgcgtgc
    10921 tttaaatctt tcaatatctt taccaaatat ctgtactctt gtgaattttc tatttttatc
    10981 aaagataagg taatgcttgc cacctttgtt ataacgataa ccagtaacat ttttaagttc
    11041 cttacttgcg ccactatagt aatctcttaa gtcaaagata tcttttgtca cattttcata
    11101 ttttgcttca tgttcactcg catttacagt ttgatgcgtt gatgttattg ttcctgttgc
    11161 taaaatacct aatgctaaac ttgctttcgc aattgctgtc attttcatag ttgtatgctc
    11221 cattcgtaat tattagattt gttcgcttac gtctattgaa tcatacagct ttattataat
    11281 tggcgtattt gtcctttcac attaaaccat gtttaataat cattgaatca ttattaagta
    11341 aattaaggaa tctataatgt tcgttaaata aaactgatcc cgttgtgctc cacacccgat
    11401 agatagggat ttacagataa attcaggact cttccacgtc atatatggac ccatcgaaaa
    11461 ttcgggttct caaatcatcg aacataacaa aagaagctaa gcaacatgta ggccgttgtc
    11521 acttaacttc ttgtttttcc gatgacagct tctatttaga gaatgtcatg attattttat
    11581 attcacttca atgctatcaa tattagtgcc atctatgaca tctgccatgc gatctttttg
    11641 tagttttttg tgcaattcaa acgtgtactt cccaccgttt ttcattttaa taataatttt
    11701 acctgaacca acgttaccgt acagattatg attttcaaca agttgttttc tcaatttaaa
    11761 atcaagttct ttcaaggaaa tctgttcttt agtaatcttg aattctgaaa catcatgaga
    11821 gattgtacct tttttatctt ccttagtaat tcttactcct gctttgtgat caactttttt
    11881 actattactc tttgtgatac caccgacaga atatttttcg agattgtaat tattttcttc
    11941 taaaacgaca aatacatcga cattcctatg tactccttca ccatattttt tatcatcttt
    12001 accaactaaa gcaattttat atatgaaata atctggaaca atattcataa atcttattgt
    12061 cgtccatttt tttaaaataa taccaatctc atttttaaat tctaaacttg gtttcgtata
    12121 atacgctctt aaatctttaa atttaggatt tatttctgtt ggtacttgtt ttgtggttgg
    12181 cgattgcggt gtttccactt tagttgaagg cggtgttggt gcattcggtg ttggttgcga
    12241 tgtttccact ttagttgaag acggtgttgt cgcatttggt gtttgttttg gtgcttcc
//
LOCUS       DALMNS010000088        11795 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.088, whole genome shotgun sequence.
ACCESSION   DALMNS010000088 DALMNS010000000
VERSION     DALMNS010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11795
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.088"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            291..1223
                     /locus_tag="O6Y56_002056"
     CDS             291..1223
                     /locus_tag="O6Y56_002056"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HDB5575303.1"
                     /translation="MLTTEKLVETLKLDLIAGEEGLSKPIKNADISRPGLEMAGYFSH
                     YASDRIQLLGTTELSFYNLLPDKDRAGRMRKLCRPETPAIIVTRGLQPPEELVEAAKE
                     LNTPLIVAKDATTSLMSRLTTFLEHALAKTTSLHGVLVDVYGVGVLITGDSGIGKSET
                     ALELVKRGHRLVADDNVEIRQINKDELIGKPPKLIEHLLEIRGLGIINVMTLFGAGSI
                     LTEKRIRLNINLENWNKQKLYDRVGLNEETLSILDTEITKKTIPVRPGRNVAVIIEVA
                     AMNYRLNIMGINTAEEFSERLNEEIIKNSHKSEE"
     gene            1229..2068
                     /locus_tag="O6Y56_002057"
     CDS             1229..2068
                     /locus_tag="O6Y56_002057"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDB5575304.1"
                     /translation="MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVK
                     AGLHKDTLVDIIFYSALFGFIVARIYFVIFQWPYYAENPGEIIKIWHGGIAIHGGLIG
                     GFIAGVIVCKVKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGPVSRAFLEQLH
                     LPNFIIENMYINGQYYHPTFLYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGR
                     FFIEGLRTDSLMLTSNIRVAQLVSILLILISISLIVYRRIKYNPPLYSKVGALPWPTK
                     KVK"
     gene            2076..2561
                     /locus_tag="O6Y56_002058"
     CDS             2076..2561
                     /locus_tag="O6Y56_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDB5575305.1"
                     /translation="MRKFLSKTYHHTNPLWHVYRLVKFSKVFKNVIIIEFSKFIPSMV
                     LKRHIYKQLLNINIGNQSSIAYKVMLDIFYPELITIGSNSVIGYNVTILTHEALVDEF
                     RYGPVTIGSNTLIGANAIILPGITIGDNVKVAAGTVVSKDIPDNGFAYGNPMYIKMIR
                     R"
     gene            2569..4008
                     /locus_tag="O6Y56_002059"
     CDS             2569..4008
                     /locus_tag="O6Y56_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDB5575306.1"
                     /translation="MAQKNNNVIPMTFDDAFYRKMANQKFKQREYKRAAEYFEKVLEL
                     SPDDLEIQIDYAQCLVQLGIAKKAEHLFYDNIIYNRHLEDSFYELSQLNIEVNEPNKA
                     FLFGINYVIVSDDQDYRDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKD
                     AKNYVLHQPQEVQDHRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYALCHYTL
                     LLYNTKENEQYQKYLKILNKVVPMNDDESFKLGIVLSYLKQYRASQQLLYPLYKKGKF
                     LSIQMYNALAYNYYYLGEEDESHYYWDKLKQISKVEIGHAPWEIENSKEVFDQHILPL
                     LQSDDSHYRLYGIFLLDQLNGKEIVMTESIWQVLENLNNYEKLYLTYLVQGLTLNKLD
                     FIHRGLLTLYHNELFVSENDLMVAWINQGELIIAEKVDLTDVEPYIGAFIYLYFKNQP
                     RNVTKKQITTWLGITQYKLNKMIEFLLSI"
     gene            4075..5010
                     /gene="trxB"
                     /locus_tag="O6Y56_002060"
     CDS             4075..5010
                     /gene="trxB"
                     /locus_tag="O6Y56_002060"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDB5575307.1"
                     /translation="MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMA
                     NTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKEL
                     TAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEG
                     TFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTL
                     TSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIMTKDDMTTSVPGIFAAG
                     DVRDKGLRQIVTATGDGSIAAQSAAEYIEHLNDQA"
     gene            5660..6571
                     /gene="rapZ"
                     /locus_tag="O6Y56_002061"
     CDS             5660..6571
                     /gene="rapZ"
                     /locus_tag="O6Y56_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499344.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HDB5575308.1"
                     /translation="MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPP
                     VLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEAS
                     TEKLISRYKETRRAHPLMEQGKKSLINAINDEREHLSQIRSIANFVIDTTKLSPKELK
                     ERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDK
                     DVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERL
                     GNYLNEVFEYNVYVHHRDAHIESGEKK"
     gene            6568..7563
                     /locus_tag="O6Y56_002062"
     CDS             6568..7563
                     /locus_tag="O6Y56_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YvcK family protein"
                     /protein_id="HDB5575309.1"
                     /translation="MRQIKVVLIGGGTGLSVMARGLREFPIDITAIVTVADNGGSTGK
                     IRDEMDIPAPGDIRNVIAALSDSESVLSQLFQYRFEENQISGHSLGNLLIAGMTNITN
                     DFGHAIKALSKILNIKGRVIPSTNTSVQLNAVMEDGEIVFGETNIPKKHKKIDRVFLE
                     PNDVQPMEEAIDALREADLIVLGPGSLYTSVISNLCVNGISDALIHSDAPKLYVSNVM
                     TQPGETDGYSVKDHIDAIHRQAGQPFIDYVICSTQTFNPQVLKKYEEKHSKPVEVNKA
                     ELEKESINVKTSSNLVEISENHLVRHNTKVLSTMIYDIALELISTIPFVPSDKRK"
     gene            7674..8618
                     /gene="whiA"
                     /locus_tag="O6Y56_002063"
     CDS             7674..8618
                     /gene="whiA"
                     /locus_tag="O6Y56_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein WhiA"
                     /protein_id="HDB5575310.1"
                     /translation="MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVI
                     NVQTENATTARRIYSLIKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGI
                     LKDGIFTHEIDHSMIQDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGL
                     TKLMNSYELNAKHLERKKGSITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNS
                     VNRLVNCETANLNKTVSAAMKQVESIKLIDKEIGIENLPDRLREIARIRVEHQEISLK
                     ELGEMVSTGPISKSGVNHRLRKLNDLADKIRNGEQIEL"
     gene            9188..9775
                     /gene="clpP"
                     /locus_tag="O6Y56_002064"
     CDS             9188..9775
                     /gene="clpP"
                     /locus_tag="O6Y56_002064"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDB5575311.1"
                     /translation="MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSI
                     VSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSF
                     LLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQ
                     SIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK"
     gene            9957..11591
                     /locus_tag="O6Y56_002065"
     CDS             9957..11591
                     /locus_tag="O6Y56_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000675915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HDB5575312.1"
                     /translation="MKGIELLNNPFLNKGTAFTNEERKQLGLEGLLPANVRTLEQQAE
                     QCYEQFKAKQTDFEKRLFLMAIFNRNRTLFYKLTSEHLVEFMPIIYDPVIAQSIEQYN
                     ENFSRPQDAVFLSVDRQDQIEQELRNVANGRDIRLIVVTDAEGILGIGDWGVDGVDIA
                     IGKLIVYTAAAGINPSQVLPVSLDVGTNNEQLLKDDLYLGNRHKRVDDETYYAFVDKF
                     VSAVRKEYPNALLHWEDFGRGHAKNILDKYEDTLPTFNDDIQGTGIVTLAGVLGALNI
                     SKVDYTNQTFLVYGGGTAGMGITNILKDELIKQGVSEEKANQHFYIMDKQGLLFDDMD
                     DLTEAQQVFAKNRNEFSNTVNWKNLKEVIENIKPTVLIGTSTQTGAFTEDAVKEMLKH
                     TERPMIFPLSNPTKLAEATAQDLLKWTNGKALIGTGIPYNDIEYNGVNYSIGQANNAL
                     MYPGLGLGLIASKAKKVNQQILSAASHALGGMVNPDEPGAAVLPPVEKIHQCSRAIAK
                     AVAQSVIDQGLNAETIDDIDKAIEAEIWYPEYKSYI"
BASE COUNT         4253 a         1581 c         2271 g         3690 t
ORIGIN      
        1 cattgcctgt agaaattggt gttccaattt ctttgtgttg gggccccgcc aactaattcg
       61 aatttatcat tgtagagctt aggtcattga tttatggctc ggacttttat ggcgatatga
      121 accatgtaaa ttaagcaagc aataaattaa tgattgatat tgacttgtaa aataataaca
      181 ataatgaaca attaatattt attttagctt ttcaatgtag attggtgtta tatttttgat
      241 atgataagaa gagatgtaag agtagggata aatacaattg aggtgaaccc atgttaacga
      301 cagaaaaact agttgaaaca ttaaagttag atttaatcgc tggtgaagaa ggactatcga
      361 agccaattaa aaatgctgat atatcaagac cgggcttaga gatggcaggt tatttttcac
      421 attatgcgtc agatagaata caactattag gaacaacgga actatcgttt tacaatttat
      481 taccagataa ggatcgcgca ggtcgtatgc gtaaactatg cagaccagaa acgcctgcaa
      541 ttattgtgac acgtggattg cagccaccag aagaattagt tgaagctgca aaagaattaa
      601 atacgccact tatagttgct aaagatgcga ctacaagttt aatgagtcgc ttaacaacgt
      661 ttttagagca tgcacttgca aagacgacat ctttacatgg tgttttagta gatgtttacg
      721 gtgttggtgt actaattacc ggtgattcag gaataggtaa aagtgagact gcgttggagt
      781 tagttaaacg tgggcataga ttagtagcag atgataatgt agaaatacgt caaattaata
      841 aagatgaact aatagggaaa ccaccaaagt taatagaaca tctattagaa atacgtggac
      901 taggtattat caatgttatg actttatttg gcgcgggttc aatattaact gaaaaacgaa
      961 ttagattaaa tattaattta gaaaactgga acaagcaaaa gttatatgat cgcgtaggac
     1021 ttaatgaaga gacgttaagt attttagata ctgaaatcac taaaaaaaca atacctgtaa
     1081 gacctggaag aaatgttgcg gtaattattg aggtcgctgc aatgaactat cgattaaata
     1141 tcatgggcat taacactgcc gaagaattta gtgaaagatt aaatgaagaa attatcaaaa
     1201 acagtcataa gagtgaggag taggttgaat gggtattgta tttaactata tagatcctgt
     1261 ggcatttaac ttaggaccac tgagtgtgcg atggtatgga attatcattg ctgtcggaat
     1321 actacttggt tactttgttg cacaacgtgc actagttaaa gcaggattac ataaagatac
     1381 tttagtagat attatttttt atagtgcact atttggattt atcgtggcac gcatctattt
     1441 tgtgattttc caatggccat attacgcgga aaatccaggt gaaattatta aaatatggca
     1501 tggtggtata gcaatacatg gtggtttaat aggtggcttt attgctggtg ttattgtatg
     1561 taaagtgaaa aatttaaacc catttcaaat tggtgatatc gttgcgccaa gtataatttt
     1621 agcgcaagga attggacgct ggggtaactt tatgaatcac gaggcacatg gtggacctgt
     1681 gtcacgcgct tttttagaac aattacattt gcctaatttt ataatagaaa atatgtatat
     1741 taacggccaa tattatcatc caacattctt atatgaatcc atttgggatg tcgctggatt
     1801 tattatctta gttaatattc gtaaacattt aaaattagga gaaacattct ttttatattt
     1861 aacttggtat tcaattggtc gattctttat agaaggatta cgtacagata gcttaatgct
     1921 tacaagtaat attagagttg cacaattagt atcaattctt ttaattttaa taagtataag
     1981 tttaattgta tatagaagga ttaagtataa tccaccgttg tatagcaaag ttggggcgct
     2041 tccatggcca acaaaaaaag tgaagtagtg atattttgag aaaattttta tcaaaaacat
     2101 atcatcatac aaacccttta tggcatgtat accgtcttgt taaattttcg aaagttttta
     2161 aaaatgtaat catcattgaa ttttcgaaat ttattccaag tatggtactg aaaagacata
     2221 tatataaaca acttttaaat attaatatcg gtaatcaatc atcgatagct tataaagtaa
     2281 tgttagatat tttttaccca gaactgatta cgattggtag taacagtgtt attggttaca
     2341 atgtaacaat tttgacgcat gaagcattag ttgatgaatt tcgttatgga ccagtgacga
     2401 tagggtctaa cactttgatt ggtgcaaatg ctatcatttt acccggtata acgattggtg
     2461 acaatgtaaa agttgcagct ggtacggttg tttcaaaaga tataccggat aatggatttg
     2521 catatggcaa ccctatgtat ataaaaatga ttaggaggtg acaattttat ggcgcaaaag
     2581 aataataatg taattccaat gacttttgat gatgcatttt atcgtaaaat ggctaatcag
     2641 aagtttaaac aaagagaata taaacgagct gctgaatact ttgaaaaagt gttagaattg
     2701 tcacctgatg atctggaaat tcaaattgat tatgcacaat gtctagtgca acttggtatt
     2761 gctaaaaaag cagaacattt attttatgac aatattattt ataataggca tctagaagat
     2821 agcttttatg aattgagtca gctcaacatt gaagttaacg aaccaaacaa ggcattcttg
     2881 tttggtatta attatgttat tgttagcgac gaccaagatt atagagatga attagaccaa
     2941 atgtttgatg tgaaatatca aagtgaagaa caaattgaac ttgaagctca attgtttgta
     3001 gttcaaatac tattccaata tcttttttct caaggtcgat taaaagatgc aaagaattat
     3061 gtcttacatc aaccacaaga agttcaagat catcgtgtcg tacgtaattt actggcaatg
     3121 tgttatttat atctcggcga atatgacacg gctaaagcat tgtacgaagc actattacaa
     3181 gaggatagta cagatatata tgcattatgc cattatactt tgctacttta taacactaag
     3241 gaaaatgaac aataccaaaa gtatttaaaa atattaaata aagttgtacc tatgaatgac
     3301 gatgaaagtt ttaaattagg tattgtttta agttatttaa agcagtatcg tgcatcacaa
     3361 caattgttgt accctttata taaaaaaggg aaatttttat caattcaaat gtacaatgct
     3421 ttagcatata attattatta tttaggtgaa gaagacgaaa gtcattacta ctgggataaa
     3481 ttgaagcaaa tttctaaagt ggaaattgga catgctcctt gggaaattga aaatagcaaa
     3541 gaagtttttg accaacatat tttgccatta cttcaaagtg atgacagtca ttatcgttta
     3601 tatggtattt ttttattgga tcaattaaat ggcaaagaaa ttgtgatgac ggaaagtatt
     3661 tggcaggttc tggaaaatct aaataattat gagaaattgt atttaacgta tttagttcaa
     3721 ggtttaacgc tcaataaatt agacttcatt catcgcggct tgttaacgct ttaccataat
     3781 gaattatttg taagtgaaaa tgatttaatg gttgcatgga ttaatcaagg tgaactcata
     3841 attgctgaaa aagtagattt aactgatgtt gagccatata tcggtgcgtt tatttatttg
     3901 tattttaaaa atcaacctcg aaacgttaca aagaagcaaa ttacaacatg gttaggcata
     3961 acacaatata aactgaacaa aatgattgaa tttctcttga gcatatagat ttatgaaaag
     4021 ttagatttat tatataatgc gcataatgat taataatgag gaggcgttaa taaaatgact
     4081 gaaatagatt ttgatatagc aattatcggt gcaggtccag ctggtatgac tgctgcagta
     4141 tacgcatcac gtgctaattt aaaaacagtt atgattgaaa gaggtattcc aggcggtcaa
     4201 atggctaata cagaagaagt agagaacttc cctggtttcg aaatgattac aggtccagat
     4261 ttatctacaa aaatgtttga acacgctaaa aagtttggtg cagtttatca atatggagat
     4321 attaaatctg tagaagataa aggcgaatat aaagtgatta actttggtaa caaagaatta
     4381 acagctaaag cggtcattat tgctacaggt gcagaataca agaaaattgg agttcctggt
     4441 gaacaagaac ttggtggacg cggtgtaagt tattgtgcag tatgtgatgg tgcattcttt
     4501 aaaaataaac gcctattcgt tatcggtggt ggtgactcag cagtagaaga gggaacattc
     4561 ttaactaaat ttgctgacaa agtaacaatc gttcaccgtc gtgatgagtt acgtgcacag
     4621 cgtattttac aagatagagc attcaaaaat gataaaatcg actttatttg gagtcatact
     4681 ttgaaatcaa ttaatgaaaa agatggcaaa gtgggttctg tgacattaac gtctacaaaa
     4741 gatggttcag aagaaacaca cgaggctgat ggtgtattca tctatattgg tatgaaacca
     4801 ttaacagcgc catttaaaga cttaggtatt acaaatgatg ttggttatat tatgacaaaa
     4861 gatgatatga caacatcagt accaggtatt tttgcagcag gagatgttcg cgacaaaggt
     4921 ttacgccaaa ttgtcactgc tactggcgat ggtagtattg cagcgcaaag tgcagcggaa
     4981 tatattgaac atttaaacga tcaagcttaa ttcgaagtcg aattaagatg ttgagctgta
     5041 aattatttgg atatttattt taatagtgtc atcacattgt taaaataatg tcttactttt
     5101 aaattaaagc aaattatata gaaaactaga acttagtacg tatcatttgt gcgtttcaat
     5161 gagttctagt ttttttatat gttatattaa acttataact ttatgggagt ggacagaaat
     5221 gatattttta caaaatttat ttcgttgtcc caccccaact tgcacattat cgtaagctga
     5281 cttttcgtca gcttctgtgt tggggcctcg ccaacttgca ttgtgtgtag aaattgggaa
     5341 tccaatttct ctgtgttggg gcccacaccc caactcgcat tgcctgtaga aattgggaat
     5401 ccaatttctc tttgttgggg cccctgacta gagttgaaaa aaagcttgtt gcaagtgcat
     5461 tttcattcag tcaactacta gcaatataat attatggacc ctaggacatt gatttatgtc
     5521 ctaagctcct ttaaatgatg tatattttta gaaatttaat ctagacatag ttaaaaataa
     5581 atataaaaca tcgttgctta attttgtcat agaacattta aattaacatc atgaaattcg
     5641 ttttggcggt gaaaaaataa tggataataa tgaaaaagaa aaaagtaaaa gtgaactatt
     5701 agttgtcaca ggtttatctg gtgcaggtaa atctttggtt attcaatgtt tagaagacat
     5761 gggatatttt tgtgtagata atctaccacc agtgttattg cctaaatttg tagagttgat
     5821 ggaacaagga aatccatcct taagaaaagt ggcaattgca attgatttaa gaggtaagga
     5881 actatttaat tcattagttg cagtagtgga taaagtcaaa agtgaaagtg acgtcatcat
     5941 tgatgttatg tttttagaag caagtactga aaaattaatt tcaagatata aggaaacgcg
     6001 tcgtgcacat cctttgatgg aacaaggtaa aaaatcgtta atcaatgcaa ttaatgatga
     6061 gcgagagcat ttgtctcaaa ttagaagtat agctaatttt gttatagata ctacaaagtt
     6121 atcacctaaa gaattaaaag aacgcattcg tcgatactat gaagatgaag agtttgaaac
     6181 ttttacaatt aatgtcacaa gtttcggttt taaacatggg attcagatgg atgcagattt
     6241 agtatttgat gtacgatttt taccaaatcc atattatgtg gtagatttaa gacctttaac
     6301 aggattagac aaagacgttt ataattatgt tatgaaatgg aaagagacag agattttctt
     6361 tgaaaaatta actgatttgt tagattttat gatacccggg tataaaaaag aagggaaatc
     6421 tcaattagta attgccatcg gttgtacggg tggacaacat agatctgtag cattagcaga
     6481 acgactaggt aattatctaa atgaagtatt tgaatataat gtttatgtgc atcataggga
     6541 cgcacatatt gaaagtggcg agaaaaaatg agacaaataa aagttgtact tatcggtggt
     6601 ggcactggct tatcagtcat ggctagggga ttaagagaat tcccaattga tattacagcg
     6661 attgtaacag ttgctgataa tggtgggagt acagggaaaa tcagagatga aatggatata
     6721 ccagcaccag gagacatcag aaatgtgatt gcagctttaa gtgattctga gtcagtttta
     6781 agccaacttt ttcagtatcg ttttgaagaa aatcaaatta gcggtcactc gttaggtaat
     6841 ttattaatcg caggtatgac taatattacg aatgatttcg gacatgccat taaagcatta
     6901 agtaaaattt taaatattaa aggtagagtc attccatcta caaatacaag tgtgcaatta
     6961 aatgctgtta tggaagatgg agaaattgtt tttggagaaa caaatattcc caaaaaacat
     7021 aaaaaaattg atcgtgtgtt tttagaacct aacgatgtgc aaccaatgga agaagcaatt
     7081 gatgctttaa gggaagcaga tttaatcgtt cttggaccag ggtcattata tacgagcgtt
     7141 atttctaact tatgtgtcaa tggtatttca gatgcgttaa ttcattctga tgcgcctaag
     7201 ctatatgtat ctaatgtgat gacgcaacct ggggaaacag atggttatag cgtgaaagat
     7261 catatcgacg cgattcatag acaagctgga caaccgttta ttgattatgt catttgtagt
     7321 actcaaactt tcaatcctca agttttgaaa aaatatgaag aaaaacattc taaaccagtt
     7381 gaagttaata aggctgaact tgaaaaagaa agcataaatg taaaaacatc ttctaattta
     7441 gttgaaattt ctgaaaatca tttagtaaga cataatacta aagtgttatc gacaatgatt
     7501 tatgacatag ctttagaatt aattagtact attcctttcg taccaagtga taaacgtaaa
     7561 taatatagaa cgtaatcata ttatgatatg ataatagagc tgtgtaaaaa aatgaaaata
     7621 gacagtggtt ctaaggtgaa tcatgtttta aataagaaag gaatgactgt acgatgagct
     7681 ttgcatcaga aatgaaaaat gaattaacta gaatagacgt cgatgaaatg aatgcaaaag
     7741 cagagctcag tgcactgatt cgaatgaatg gtgcacttag tctttcaaat caacaatttg
     7801 ttataaatgt tcaaacggaa aatgcaacaa cggcaagacg tatttattcg ttgattaaac
     7861 gtgtctttaa tgtggaagtt gaaatattag tccgtaaaaa aatgaaactt aaaaaaaata
     7921 atatttatat ttgtcgtaca aagatgaaag cgaaagaaat tcttgatgaa ttaggaattt
     7981 taaaagacgg catttttacg catgaaattg atcattcaat gattcaagat gacgaaatga
     8041 gacgcagtta cttgagagga gcttttctgg caggtggctc agtgaataac cctgaaacat
     8101 cttcgtacca tttggaaatt ttttctcaaa atgagagtca tgcagaaggc ttaacaaaac
     8161 taatgaatag ttatgagttg aatgccaaac atttagagcg aaaaaaagga agtattacgt
     8221 atttaaaaga agcggaaaag atttcggatt ttcttagttt gataggtggc tatcaagcgt
     8281 tattaaaatt tgaagacgta cgtattgtaa gagatatgcg taattctgtt aaccgactcg
     8341 ttaattgtga aacggcaaat ctaaataaaa cagttagtgc tgcgatgaaa caagttgaga
     8401 gcattaaatt gattgataaa gaaattggta ttgaaaattt accagacagg ttgagggaga
     8461 ttgctagaat tcgagtagaa catcaagaaa tttcgttgaa agagcttgga gaaatggtgt
     8521 caactggtcc aatttcaaaa tcaggtgtaa atcatcgatt aagaaaactt aatgatttag
     8581 ccgataagat tagaaatggt gaacaaatag aattataagt aagaaggtgt ttttggtagc
     8641 gaattatcaa aaataccttt tttatgatta aaaagtgttt aatgaataat agtcgactaa
     8701 ctattaaatt gatctggaaa gtttaatgaa ggaaattcaa taaccaagcg ttacctaatt
     8761 ttctcattaa gtagcatcat atatatcaat ttggtcgtaa gaaaatacga atgtgataat
     8821 taattgagtc cctgaaagtc cctgattata gacaaaaaaa tcagcataaa aagaatcccg
     8881 acattgcggg attctctgta ttgaaaagta ttgtatttta tttaaatgcc tccttgaagg
     8941 gaatcgaacc cctatcttaa gaaccggaat cttacgtgtt atccattaca ccacaaggag
     9001 taaatatgtt aatcaaatca ctgtactatc agaagtaaaa taagtacaat ctaaaataga
     9061 tattatcagt ttacaaagga aagagacaag cgtcaatcaa tgtaactatt taaagtcaaa
     9121 gtgtttgacc aaatttgact taatatgtaa aataatgagt aacagttatt acaaggagga
     9181 aatatagatg aatttaattc ctacagttat tgaaacaaca aatcgcggtg aacgtgcata
     9241 cgatatatac tcacgtttat taaaagaccg tattattatg ttaggttcac aaattgatga
     9301 caacgtagca aattcaatcg tatcacagtt attattctta caagcacaag actcagagaa
     9361 agatatttat ttatacatta attcaccagg aggaagtgta acagctggtt ttgcgattta
     9421 tgatacaatt caacacatta aacctgatgt tcaaacaatt tgtatcggta tggctgcatc
     9481 aatgggatca ttcttattag cagctggtgc taaaggtaaa cgttttgcgt taccaaatgc
     9541 agaagtaatg attcaccaac cattaggtgg tgctcaagga caagcaactg aaatcgaaat
     9601 tgctgcaaat cacattttaa aaacacgtga aaaattaaac cgcattttat cagagcgtac
     9661 tggtcaaagt attgaaaaaa tacaaaaaga cacagatcgt gataacttct taactgcaga
     9721 agaagctaaa gaatatggct taattgatga agtgatggta cctgaaacaa aataattcaa
     9781 agtaaagagt agactaagca gtctgctctt tttgtatgag taaaccaagg tataaataaa
     9841 ttgtcaaaaa catttcgatt aaaagcaaaa aataacgggt aaaaatgttt atgagaattt
     9901 aattagacac gttgcgtctg cggttcaaca atctaaaaaa tataaaggat gattttatga
     9961 aaggcattga attacttaac aatccatttt taaacaaagg tacagctttt actaacgaag
    10021 aaagaaaaca gttagggctt gaaggtttat tacctgcgaa tgttcgaact ttagaacaac
    10081 aagcagaaca atgttatgaa caattcaagg cgaaacaaac cgattttgag aaacgtttat
    10141 ttttaatggc aatttttaat cgtaatcgta cattgtttta caaattgact tcagagcatt
    10201 tagttgaatt tatgccaatt atctatgacc ctgttattgc acaatcgatt gaacaatata
    10261 atgagaattt cagcagaccc caagatgcag tatttttatc tgttgataga caagatcaaa
    10321 ttgaacaaga attgcgcaac gttgcaaatg gcagagatat tcgattaatc gtagtgacag
    10381 atgcggaagg tatattaggt atcggcgatt ggggcgttga tggtgtagat attgcgatag
    10441 gaaaattaat agtatataca gcagcagctg gaataaatcc ttcacaagtc ttacctgtat
    10501 ctttagatgt aggtactaat aatgaacaat tactaaagga tgacctttat ttaggaaatc
    10561 gtcataaacg tgtcgatgat gagacatatt acgcatttgt agataaattt gtgagtgcag
    10621 tgcgtaaaga atatcctaat gcactattac attgggaaga ttttggtaga gggcatgcca
    10681 aaaatatttt agataaatat gaagatacgt taccaacttt taatgatgat attcaaggta
    10741 caggtatagt tacattagct ggtgtactag gtgcattaaa tatttctaaa gtagattata
    10801 cgaatcagac gtttttagtt tatggtggtg gtacagctgg tatgggtatt accaatattt
    10861 taaaagatga actaattaaa cagggtgttt cagaagaaaa agcaaatcag catttctata
    10921 ttatggataa acaaggatta ttgtttgatg atatggatga tttaactgaa gcgcaacaag
    10981 tatttgctaa aaataggaat gaattttcaa atacagtaaa ctggaaaaat ttaaaagaag
    11041 taattgaaaa tattaagcct actgttttaa tcggtacatc aactcaaaca ggtgcattta
    11101 cagaagatgc agtaaaagag atgttaaaac atacagaacg tccaatgatt ttcccattgt
    11161 ctaatcctac aaaattagca gaagcaactg cacaagattt attaaaatgg actaacggaa
    11221 aagcattaat tggaactggt atcccatata atgacattga atacaatggt gtgaattaca
    11281 gtattggtca agcaaataat gcattgatgt atcctggttt aggtttgggg cttattgcgt
    11341 caaaagcgaa gaaagtaaat caacagattc tatcagctgc cagtcatgca cttggtggca
    11401 tggtcaatcc agatgaacca ggtgctgcag tcttaccacc tgtcgagaaa atacatcaat
    11461 gttctcgtgc catagccaaa gcggttgcac aaagtgtcat tgatcaagga ttaaacgctg
    11521 aaactattga tgatattgac aaagcaattg aagctgaaat ttggtatcct gaatacaaat
    11581 catacattta attttataaa gtagtaaaag gtcatttgaa cattttgttt caagtggcct
    11641 tttcgtattt acattaaaat taattaacca atattcataa gtgattttaa agttataact
    11701 atatgtaata tcagcgaata gaagggaatg ggacagaaat gatattttta caaaatttat
    11761 ttcgttgtcc caccccggca aggttgacta gagtt
//
LOCUS       DALMNS010000089        11791 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.089, whole genome shotgun sequence.
ACCESSION   DALMNS010000089 DALMNS010000000
VERSION     DALMNS010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11791
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.089"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            173..2704
                     /gene="secA"
                     /locus_tag="O6Y56_002066"
     CDS             173..2704
                     /gene="secA"
                     /locus_tag="O6Y56_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDB5575313.1"
                     /translation="MGFLSKILDGNNKEIKQLGKLADKVIALEEKTAILTDEEIRNKT
                     KQFQTELAVIDNVKKQNDYLDKILPEAYALVREGSKRVFNMTPYKVQIMGGIAIHKGD
                     IAEMRTGEGKTLTATMPTYLNALAGRGVHVITVNEYLSSVQSEEMAELYNFLGLAVGL
                     NLNSKTTEEKREAYAQDITYSTNNELGFDYLRDNMVNYSEDRVMRPLHFAIIDEVDSI
                     LIDEARTPLIISGEAEKSTSLYTQANVFAKMLKQDEDYKYDEKTKAVHLTEQGADKAE
                     RMFKVENLYDVQNVDVISHINTALRAHVTLQRDVDYMVVDGEVLIVDQFTGRTMPGRR
                     FSEGLHQAIEAKEGVQIQNESKTMASITFQNYFRMYNKLAGMTGTAKTEEEEFRNIYN
                     MTVTQIPTNKPVQRNDKSDLIYISQKGKFDAVVEDVVEKHKAGQPVLLGTVAVETSEY
                     ISNLLKKRGIRHDVLNAKNHEREAEIVAGAGQKGAVTIATNMAGRGTDIKLGEGVEEL
                     GGLAVIGTERHESRRIDDQLRGRSGRQGDKGDSRFYLSLQDELMIRFGSERLQKMMSR
                     LGLDDSTPIESKMVSRAVESAQKRVEGNNFDARKRILEYDEVLRKQREIIYNERNSII
                     DEEDSSQVVDAMLRSTLQRSINYYINTADDEPEYQPFIDYINDIFLQEGDITEDDIKG
                     KDAEDIFEVVWAKIEAAYQSQKDILEEQMNEFERMILLRSIDSHWTDHIDTMDQLRQG
                     IHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNIEREKTTEFG
                     EAKHVSAEDGKEKVKPKPIVKGDQVGRNDDCPCGSGKKFKNCHGK"
     gene            2746..2844
                     /locus_tag="O6Y56_002067"
     CDS             2746..2844
                     /locus_tag="O6Y56_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575314.1"
                     /translation="MLWEESFYFTSVKYLKKCEEVVKRCYVLSLKK"
     gene            3019..4129
                     /gene="prfB"
                     /locus_tag="O6Y56_002068"
     CDS             join(3019..3090,3092..4129)
                     /gene="prfB"
                     /locus_tag="O6Y56_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667688.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDB5575315.1"
                     /translation="MELSEIKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPN
                     FWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQEV
                     INFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGF
                     KVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS
                     CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQN
                     ERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMV
                     KDHRTNEETGKVDAVMDGDIGPFIESYLRQTMSHD"
     gene            4283..4390
                     /locus_tag="O6Y56_002069"
     CDS             4283..4390
                     /locus_tag="O6Y56_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575316.1"
                     /translation="MCLLKQHMQCAFSNITYGDFQGIELIIENVLNYMV"
     gene            4538..5377
                     /locus_tag="O6Y56_002070"
     CDS             4538..5377
                     /locus_tag="O6Y56_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDB5575317.1"
                     /translation="MKKSLTVTVSSVLAFLALNNAAHAQQHGTQVKTPVQHNYVSNVQ
                     AQTQSPTTYTVVAGDSLYKIALEHHLTLNQLYSYNPGVTPLIFPGDVISLVPQNKVKQ
                     TKVVKSPVRKASQAKKVVKQPVQQASKKVVVNQAPKQAVAKTVNVAYKPAQVQKSVPT
                     VPVAHNYNKSVANRGNLYAYGNCTYYAFDRRAQLGRSIGSLWGNANNWNYAAKVAGFK
                     VDKTPEVGAIFQTAAGPYGHVGVVESVNPNGTITVSEMNYAGFNVKSSRTILNPGKYN
                     YIH"
     gene            5551..6201
                     /locus_tag="O6Y56_002071"
     CDS             5551..6201
                     /locus_tag="O6Y56_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDB5575318.1"
                     /translation="MGVHQYFKRLSDMERLIRLPGKFKYFEHNVAAHSFKVTKIAQYL
                     ATVEEYHGRKINWKSLYEKALNHDFAEVFTGDIKTPVKYASSELKKLFSQVEEEMVET
                     FIEEEIPLQYRDVYKQRLQEGKDDSLEGQILSVADKIDLLYETFGEIQKRNPEELFFE
                     IYEMSLETIIQFDHLASVQDFINNIIPEMLTENFIPRTELRETTMNILNKRKEENE"
     gene            6198..6434
                     /locus_tag="O6Y56_002072"
     CDS             6198..6434
                     /locus_tag="O6Y56_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbA family protein"
                     /protein_id="HDB5575319.1"
                     /translation="MIWYFSAAFFPCVLVVLFSVITRSKWIGTILTLILIGASIYKEY
                     FHNEWIIFIDVVSLLAGYLIIDQLEFHKHQDEDR"
     gene            6703..8688
                     /gene="uvrB"
                     /locus_tag="O6Y56_002073"
     CDS             6703..8688
                     /gene="uvrB"
                     /locus_tag="O6Y56_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002473941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HDB5575320.1"
                     /translation="MVEHYPFKIHSDFEPQGDQPQAIKEIVEGIKAGKRHQTLLGATG
                     TGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEA
                     YVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLV
                     VSVRVGMEMDRSELLRKLVDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEF
                     FGDEIDRIREVNYLTGEVLKEREHFAIFPASHFVTREEKLKVAIERIEKELEERLKEL
                     RDENKLLEAQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDD
                     WLIMIDESHVTLPQVRGMYNGDRARKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLV
                     YVSATPGPYEIEHTDKMVEQIIRPTGLLDPKIEVRPTENQIDDLLSEIQTRVERNERV
                     LVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDVIVGINLLR
                     EGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKMTDSMKYAI
                     DETQRRREIQMKHNEKHGITPKTINKKIHDLISATVENDENNDKAQTVIPKKMTKKER
                     QKTIDNIEKEMKQAAKDLDFEKATELRDMLFELKAEG"
     gene            8696..11542
                     /gene="uvrA"
                     /locus_tag="O6Y56_002074"
     CDS             8696..11542
                     /gene="uvrA"
                     /locus_tag="O6Y56_002074"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDB5575321.1"
                     /translation="MKEPSIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAF
                     DTIYAEGQRRYVESLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVAT
                     VTEIYDYIRLLYARVGKPYCPNHNIEIESQTVQQMVDRIMELEARTKIQLLAPVIAHR
                     KGSHEKLIEDIGKKGYVRLRIDGEIVDVNDVPTLDKNKNHTIEVVVDRLVVKDGIETR
                     LADSIETALELSEGQLTVDVIDGEDLKFSESHACPICGFSIGELEPRMFSFNSPFGAC
                     PTCDGLGQKLTVDVDLVVPDKDKTLNEGAIEPWIPTSSDFYPTLLKRVCEVYKINMDK
                     PFKKLTERQRDILLYGSGDKEIEFTFTQRQGGTRKRTMVFEGVVPNISRRFHESPSEY
                     TREMMSKYMTELPCETCHGKRLSREALSVYVGGLNIGEVVEYSISQALNYYKNINLSE
                     QDQAIANQILKEIISRLTFLNNVGLEYLTLNRASGTLSGGEAQRIRLATQIGSRLTGV
                     LYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTLIVVEHDDDTMRAADYLVDIGPGAGE
                     HGGQIVSSGAPQKVMKDKKSLTGQYLSGKKRIEVPEYRRPASDRKISIRGARSNNLKG
                     VDVDIPLSIMTVVTGVSGSGKSSLVNEVLYKSLAQKINKSKLKPGLYDKIEGIDQLDK
                     IIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNEAKIRGYQKGRFSFNVKGGRCEA
                     CKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYKGKNIADILEMTVEEATQFF
                     ENIPKIKRKLQTLVDVGLGYVTLGQQATTLSGGEAQRVKLASELHKRSTGKSIYILDE
                     PTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYIIDLGPEGGSGGGTIV
                     ATGTPEDIAQTKSSYTGKYLKEVLERDKQNTEDK"
BASE COUNT         4379 a         1639 c         2319 g         3454 t
ORIGIN      
        1 gagaatatat ttattagtga taaacttgtt ggcaacagaa tgtgaatgaa gtatgtcata
       61 aatatattta tattgattct acaaatgagt aaataagtat aattttctaa ctataaatga
      121 taagatatat tgttgtaggc caaacagttt tttagctaaa ggagcgaacg aaatgggatt
      181 tttatcaaaa attcttgatg gcaataataa agaaattaaa cagttaggta aacttgctga
      241 taaagtaatc gctttagaag aaaaaacggc aattttaact gatgaagaaa ttcgtaataa
      301 aacgaaacaa ttccaaacag aattagctgt cattgataat gtcaaaaagc aaaatgatta
      361 tttagataaa attttaccag aagcatatgc acttgttaga gaaggctcta aacgtgtatt
      421 caatatgaca ccatataaag ttcaaattat gggtggtatt gcaattcata aaggtgatat
      481 cgctgagatg agaacaggtg aaggtaaaac attaacagcg acaatgccaa catacttaaa
      541 tgcattagct ggtagaggtg ttcacgttat tacagtcaat gaatacttat caagtgttca
      601 aagtgaagaa atggctgagt tatataactt cttaggtttg gctgtcggat taaacttaaa
      661 cagtaagacg acagaagaaa aacgtgaagc atatgcacaa gacattactt atagtactaa
      721 taatgagcta ggttttgatt acttacgtga taacatggtg aattattctg aagatagagt
      781 aatgcgtcca ttacattttg caatcattga tgaggttgac tcaattttaa tcgacgaggc
      841 acgtacgcca ttaattattt ctggtgaagc tgaaaagtca acgtcacttt atacacaagc
      901 aaatgttttt gcgaaaatgt taaaacagga cgaagattat aaatacgatg aaaaaacgaa
      961 agccgtacat ttaacagaac aaggtgcgga taaagctgaa cgtatgttca aagttgaaaa
     1021 cttatatgat gtacaaaatg ttgatgttat tagtcatatc aacacagctt tacgtgcgca
     1081 cgttacatta caacgtgacg tagactatat ggttgttgat ggcgaagtat taattgtcga
     1141 tcaatttaca ggtcgtacaa tgccaggccg tcgtttctcg gaaggtttac accaagctat
     1201 tgaagcgaag gaaggcgttc aaattcaaaa tgaatctaaa actatggcgt ctattacatt
     1261 ccaaaactat ttcagaatgt acaataaact tgcgggtatg acaggtacag ctaaaactga
     1321 agaagaagaa tttagaaata tttataacat gacagtaact caaattccga caaataaacc
     1381 tgtgcaacgt aacgataagt ctgatttaat ttacattagc caaaaaggta aatttgatgc
     1441 agtagtagaa gatgttgttg aaaaacacaa ggcagggcaa ccagtgctat taggtactgt
     1501 tgcagttgag acttctgaat atatttcaaa tttacttaaa aaacgtggta tccgtcatga
     1561 tgtgttaaat gcgaaaaatc atgaacgtga agctgaaatt gttgcaggcg ctggacaaaa
     1621 aggtgccgtt actattgcca ctaacatggc tggtcgtggt acagatatca aattaggtga
     1681 aggcgtagag gaattaggcg gtttagcagt aataggtaca gagcgacatg aatctcgtcg
     1741 tattgatgac cagttacgtg gtcgttctgg acgtcaaggt gataaagggg atagtcgctt
     1801 ctatttatca ttacaagatg aattaatgat tcgttttggt tctgaacgtt tacagaaaat
     1861 gatgagccga ctaggtttag atgactctac accaattgaa tcaaaaatgg tatcaagagc
     1921 tgtagaatca gcacaaaaac gtgtagaagg taataacttc gacgcgcgta aacgtatctt
     1981 agaatacgat gaagtattac gtaaacaacg tgaaattatc tataacgaaa gaaatagtat
     2041 tattgatgaa gaagatagct ctcaagttgt agatgcaatg ctacgttcaa cgttacaacg
     2101 tagtatcaat tactatatta atacagcaga tgacgagcct gaatatcaac cattcatcga
     2161 ctacattaat gacattttct tacaagaagg tgacattaca gaggatgata tcaaaggtaa
     2221 agatgctgaa gatattttcg aagtcgtttg ggctaagatt gaagcagcat atcaaagtca
     2281 aaaagatatc ttagaagaac aaatgaatga gtttgagcgt atgattttac ttcgttctat
     2341 tgatagccat tggactgatc atatcgacac aatggatcaa ttacgtcaag gtattcactt
     2401 acgttcttat gcacaacaaa atccattacg tgactatcaa aatgaaggtc atgaattatt
     2461 tgatatcatg atgcaaaata tcgaagaaga tacttgtaaa ttcattttaa aatctgtagt
     2521 acaagttgaa gataatattg aacgtgaaaa aacaacagag tttggtgaag cgaagcacgt
     2581 ttcagctgaa gatggtaaag aaaaagtgaa accgaaacca atcgttaaag gcgatcaagt
     2641 tggtcgtaac gatgattgtc catgtggtag tggtaaaaaa ttcaaaaatt gccatggaaa
     2701 ataaatgata taaaataact ccttccaatt aaacacctat agtttgtgtt atgggaggag
     2761 tctttttatt ttacaagcgt taaatactta aaaaaatgtg aagaagttgt taaacgttgt
     2821 tatgtactta gtttaaaaaa ataggtttaa gcatatgtcg atgataaatg tactgatttt
     2881 taacaataaa agcataaact aattgacaat gtgcttatat ttcttaacat tgttatttaa
     2941 caaaattatg ttaaaattta gcattataaa agatacaaat caatgacttg aattgaatta
     3001 taaataggag cgaaggctat ggaattatca gaaatcaaac gaaatataga taagtataat
     3061 caagatttaa cacaaattag ggggtctctt tgacttagag aacaaagaaa ctaatattca
     3121 agaatatgaa gaaatgatgg cagaacctaa tttttgggat aaccaaacga aagcgcaaga
     3181 tattatagat aaaaataatg cgttaaaagc aatagttaat ggttataaaa cactacaagc
     3241 agaagtagat gacatggatg ctacttggga tttattacaa gaagaatttg atgaagaaat
     3301 gaaagaagac ttagagcaag aggtcattaa ttttaaggct aaagtggatg aatacgaatt
     3361 gcaattatta ttagatggac ctcacgatgc caataacgca attctagagt tacatcctgg
     3421 tgcaggtggc acggagtctc aagattgggc taatatgcta tttagaatgt atcaacgtta
     3481 ttgtgagaag aaaggtttta aagttgaaac tgttgattat ttacctggag atgaagcggg
     3541 gattaaaagt gtaacattgc tcatcaaagg gcataatgct tatggttatt taaaagctga
     3601 aaaaggtgta caccgactag tacgaatttc tccatttgat tcatcaggac gtcgccatac
     3661 atcatttgca tcatgcgacg tgattccaga ttttaataat gatgaaatag agattgaaat
     3721 caatccggat gatattacag ttgatacatt cagagcttct ggtgcgggtg gtcagcatat
     3781 taacaaaact gaatcggcaa tacgaattac ccaccacccc tcaggtatag ttgttaataa
     3841 ccaaaatgaa cgttctcaaa ttaaaaaccg tgaagcagct atgaaaatgt taaagtctaa
     3901 attatatcaa ttaaaattgg aagagcaggc acgtgaaatg gctgaaattc gtggcgaaca
     3961 aaaagaaatc ggatggggaa gccaaattag atcatatgtt ttccatccat actcaatggt
     4021 gaaagatcat cgtacgaacg aagaaacagg taaggttgat gcagtgatgg atggagacat
     4081 tggaccattt atcgaatcat atttaagaca gacaatgtcg cacgattaat atatatttta
     4141 aaaccgaggc tctaaaaggg catcggtttt tggtttttat aaaggtagct aaataaattg
     4201 taaattagat tttgaaatat gatttgttta tgaatattta agaacaattc ggtagatagg
     4261 tttagaatat attttttaaa agttgtgttt gttaaaacaa catatgcagt gtgcatttag
     4321 taatattacc tatggcgatt ttcaaggtat tgaattaatt attgaaaacg ttctcaatta
     4381 tatggtatga atacatttta cactatgata aaagtttgta ttctttttat attgttaacc
     4441 atttgattac atcgttataa caatagcttt tgacaaaatg tattgtgcta tagtatttgc
     4501 atacttaaaa tactaacagc aaaggaatga cagcaagatg aaaaaatctc ttacggtgac
     4561 ggtttcgtca gtgttagctt ttttagcttt aaataatgca gcacatgcac aacaacatgg
     4621 cacacaagta aaaacacctg ttcaacataa ttatgtatca aatgttcaag cacaaacgca
     4681 atcaccgaca acttatacag tagttgctgg cgattcatta tataaaattg ctttagagca
     4741 tcacttaacg ttgaatcaat tatattcata caatcctggt gtaacacctt taatttttcc
     4801 tggtgacgtg atttcacttg tgcctcaaaa taaagtgaaa caaactaaag tggttaaatc
     4861 accagtaaga aaagcaagcc aagctaaaaa ggtagtaaaa caacctgtac aacaagcgtc
     4921 taaaaaagta gtagttaatc aagcacctaa gcaagcagta gctaagacag ttaatgtagc
     4981 atacaaacct gcccaagtac aaaaatcagt accaactgta cctgttgcac ataactacaa
     5041 taaatcagtt gctaacagag gaaacttata tgcttatgga aactgcacat attatgcttt
     5101 cgatcgtcgt gcacaattag gtagaagtat aggaagttta tggggcaatg caaataactg
     5161 gaattacgca gcaaaagttg caggatttaa agtagataaa acaccagaag ttggcgctat
     5221 tttccaaaca gctgctggtc catatggaca tgttggtgtt gttgaatctg taaaccctaa
     5281 tggaacaatt actgtttcgg aaatgaacta tgctggattt aatgttaaat cttcaagaac
     5341 aattttaaat ccaggaaaat ataattacat ccactaagta atatatcaag acaagactat
     5401 cctcttagcc tgtttaagta acaggttgag aggatttttt ggtatcattt aatcagagtt
     5461 atataaagaa gatatttaaa tgatatttaa ttgaatgata tgtaaaaaga aagtataatt
     5521 tatgattaat taatggagga ggtaattgaa atgggtgtac atcaatattt taaaagatta
     5581 tcagatatgg aaagacttat aagattacct ggaaaattta aatattttga acacaatgtt
     5641 gcagcacact cctttaaagt aactaaaatt gctcaatatc tagcaacagt tgaagaatat
     5701 catggacgaa agattaattg gaaaagctta tatgaaaaag cattaaatca tgatttcgct
     5761 gaagtgttta ctggtgatat aaaaacacct gttaaatatg cgagtagtga attaaaaaaa
     5821 ttattttcgc aagttgaaga agaaatggta gagaccttta ttgaagaaga aattccatta
     5881 caatatagag atgtttataa gcaacgactg caagaaggta aagatgattc attagaaggc
     5941 caaatacttt cagttgctga taaaattgat ttgctttatg aaacatttgg agaaatacaa
     6001 aaacgtaatc ccgaagaatt atttttcgaa atttatgaaa tgagtctaga aacaattatt
     6061 caatttgacc atttagcatc tgtacaagat tttattaata atatcattcc agaaatgttg
     6121 actgaaaact ttatacctag aacagaatta agagaaacaa ccatgaacat tttaaataaa
     6181 agaaaagagg aaaatgaatg atatggtatt ttagcgcagc attctttcca tgtgtcctgg
     6241 tagtattgtt tagtgtaata acaagaagta aatggatcgg tactattctg acattaattt
     6301 taatcggtgc ctcaatctat aaagagtatt tccataacga gtggattatt tttattgatg
     6361 tagtgtcatt attagctggt tatttaatta tagatcaact cgaatttcat aaacatcaag
     6421 atgaagatcg ctaagattaa ctttaaaata atgtttcaaa caaatttgtt gaaacaaaac
     6481 gatgattaat ataatgtgta tttacatact aaaaataaca agataaacga tttgatttaa
     6541 tgcaagcata gttagcacaa ctatgtttgt ttttctttgt tcgacatttt tacgaacaaa
     6601 cgtttgcttt ttgtgtgact actttgctaa aatatgtaat gagaaagcga agagttgagc
     6661 ggaaatataa ataaaacgtt gaaagaggag gcatatgtga caatggttga acattatcct
     6721 tttaaaatac attctgattt tgagcctcaa ggtgaccaac cgcaagcaat taaagaaatc
     6781 gtggaaggta ttaaagcggg gaaaagacat caaactttat taggtgctac tggcacaggg
     6841 aaaacattta cgatgagtaa tgttattaaa gaagttggga aaccaacgtt aattatcgcg
     6901 cataacaaaa cattagcagg acaattatat agtgagttta aagagttttt tcctgaaaac
     6961 agggtggaat actttgtaag ttactatgat tattatcaac cagaggcata cgtaccgtct
     7021 actgacactt ttattgaaaa agatgcctca atcaatgatg aaattgatca actacgacat
     7081 tctgctacaa gtgcattatt tgaacgcgat gatgtaatta ttattgctag tgtaagttgt
     7141 atatatggtt taggtaatcc tgaagaatat aaagatttag tagtaagtgt tcgagttggt
     7201 atggaaatgg atagaagtga attacttaga aaacttgtag atgtgcaata tacacgaaat
     7261 gacatcgatt tccaacgagg aacgtttcga gtgcgtggtg atgtagttga aatattccca
     7321 gcctctaaag aagaactttg tataagggtt gagtttttcg gcgatgagat tgaccgtatc
     7381 cgagaagtta actacctaac aggtgaagtg ttgaaagaaa gagaacattt tgcgatattc
     7441 ccagcttctc acttcgtaac acgtgaagaa aagttgaaag ttgcgattga acgtattgaa
     7501 aaagaattgg aagaacgatt gaaagaatta cgagatgaga ataaattact agaagcgcaa
     7561 aggttagaac agcgtaccaa ctatgattta gaaatgatgc gagaaatggg attctgttca
     7621 ggaattgaaa actattcagt acatttaacg ttgcgaccac taggttcgac accatatact
     7681 ttattggatt actttggcga tgattggtta ataatgattg atgaatcaca tgtgacgtta
     7741 ccgcaagttc gtggcatgta taacggagac agagcacgaa aacaagtttt agttgatcat
     7801 ggatttagat taccaagtgc gttagataac cgcccactta aatttgaaga atttgaagaa
     7861 aagacgaaac aacttgtgta tgtatctgca acgcctggtc catacgaaat tgaacatacg
     7921 gataagatgg ttgaacaaat tattcgtcct actggtttac tggaccctaa gattgaggtt
     7981 agacctactg aaaatcaaat tgacgattta ttaagtgaaa ttcaaacaag ggttgagcgt
     8041 aatgaaagag tacttgttac aacactcact aaaaagatga gtgaagattt aaccacatat
     8101 atgaaagaag caggcattaa agttaactat ctacattctg aaattaaaac attagaacga
     8161 atcgaaataa ttagagactt acgaatgggt acatatgatg ttatcgtagg tattaattta
     8221 ttaagagagg gtattgatat accagaagtt tctctagttg tcatattaga tgcagataaa
     8281 gaaggatttt tacgttctaa ccgctcatta attcaaacaa taggtagagc tgcgcgtaac
     8341 gataaaggtg aagtcattat gtatgctgat aaaatgactg attcgatgaa gtatgcaatt
     8401 gatgagacac aacgtcgtcg agaaatacag atgaaacata atgaaaaaca tggtattaca
     8461 cctaaaacaa ttaataaaaa aatacatgat ttaattagtg ctactgttga aaatgacgaa
     8521 aataatgaca aagcacaaac tgtgatacct aagaagatga cgaaaaaaga acgtcaaaag
     8581 acaatcgaca atatagaaaa agaaatgaaa caagcagcga aagatttaga tttcgagaaa
     8641 gctacagaat taagagatat gttatttgaa ttaaaagcag aagggtgaca agtaaatgaa
     8701 agaaccatcc atagtagtaa aaggtgctcg tgcgcataac ttgaaagata ttgatatcga
     8761 actacctaaa aataaattaa ttgttatgac aggtttatct gggtcaggta aatcgtcatt
     8821 agcattcgat actatatatg ctgaaggaca acgacgttat gttgaatcat taagtgccta
     8881 tgcgcgtcaa tttttaggcc aaatggacaa accagatgtt gatacaattg aaggattatc
     8941 gccagcaatt tcaatagatc aaaaaacaac aagtaaaaat ccaagatcaa ctgtagcaac
     9001 agtaacagaa atatatgatt atatacgttt gttatatgca cgcgttggta aaccttactg
     9061 tccaaatcac aatatagaaa ttgaatcgca aacagtacaa caaatggttg accgcattat
     9121 ggaattagag gcacgtacaa agattcaatt attagcacct gtcatcgctc atcgtaaagg
     9181 tagtcatgaa aagctaatcg aagatattgg taaaaaaggt tatgtacgtt taagaatcga
     9241 tggcgaaatt gttgatgtaa atgatgtacc tacattagat aagaacaaga atcatacaat
     9301 agaagttgtt gtagaccgat tagttgttaa agatggaatt gaaacacgac tagctgactc
     9361 tatagaaact gcgttagagc tttcagaagg acaattaaca gttgatgtta ttgacgggga
     9421 agaccttaag ttttcagaaa gccacgcttg tcctatatgt ggattttcaa tcggagaatt
     9481 agaaccaaga atgtttagct ttaacagtcc ttttggtgct tgtccaacat gtgatggctt
     9541 agggcaaaag ttaacagtcg atgtagactt ggttgttcct gacaaagata agacactaaa
     9601 cgaaggtgca atagaacctt ggataccgac gagttctgat ttttatccaa cattgttaaa
     9661 acgtgtttgt gaagtttata aaatcaatat ggataaacct tttaaaaagt taacagaacg
     9721 tcaacgtgat attttattgt atggttcggg tgacaaagaa attgaattta catttacaca
     9781 acgtcaaggt ggtactagaa aacgaacaat ggtcttcgag ggtgtagttc ctaatataag
     9841 tagacgattc cacgaatcac cttcagaata tacacgtgaa atgatgagta aatatatgac
     9901 cgaactacct tgcgaaactt gtcatggaaa gcgattgagt cgtgaagcgt tatctgttta
     9961 tgtaggtggt ttaaatattg gtgaagtagt cgaatactca atcagtcaag cgctgaacta
    10021 ttataaaaac attaatttgt cagaacaaga tcaagcgatt gcaaatcaaa tattgaaaga
    10081 aattatttct cgactcactt ttttaaataa tgtgggactt gaatatttaa cgctaaacag
    10141 agcttcaggt acactttcag gtggtgaagc acaacgtatt cgattagcaa cgcaaattgg
    10201 gtcacgtttg actggtgtct tatatgtatt agatgagcca tcaattggac tgcatcaaag
    10261 agataatgat cgattaatta atacacttaa agaaatgaga gatttaggaa atactttaat
    10321 tgtagttgaa cacgatgatg atacaatgcg tgcggctgat tacttagtgg acatagggcc
    10381 tggtgctggt gagcatggag gacagattgt gtctagtggt gcacctcaaa aggtaatgaa
    10441 agataaaaaa tctttaacag gacaatactt gagtggtaag aaacgtattg aagtacctga
    10501 atatcgcaga ccggcttcag atcgtaaaat ttctatacgt ggagctagaa gtaacaacct
    10561 taaaggggtt gatgtggaca taccactatc aatcatgacg gtcgttacag gtgtatcagg
    10621 ttcaggtaaa agctcattag taaatgaagt attatacaaa tcattagctc aaaaaatcaa
    10681 taaatctaaa ttaaagccag gattgtacga taagattgaa ggtattgatc aacttgataa
    10741 aattattgat attgatcaat caccgatagg tagaacgcca cgctctaatc cagcaacgta
    10801 tactggtgtg tttgatgata tacgtgattt gtttgcgcaa acaaatgaag ctaaaattcg
    10861 aggatatcaa aaaggccgtt ttagttttaa tgtaaaaggt ggacgctgtg aagcttgtaa
    10921 aggtgacggt attattaaga ttgaaatgca ttttttacct gatgtttatg ttccttgtga
    10981 agtgtgtgat ggtaaacgat ataatcgtga gacactagag gttacttaca aaggtaaaaa
    11041 tattgctgac attttagaaa tgactgttga agaggcaaca caattttttg aaaacattcc
    11101 taagattaag cgcaagctac aaacactagt tgatgttggt cttggatacg tcacattagg
    11161 tcaacaagct acaacgttat caggtggtga ggctcaacgt gtgaaacttg catctgaact
    11221 tcataaacgt tcaactggta aatctattta tatcctagac gaaccgacaa cagggttaca
    11281 tgttgacgat attagtagat tattaaaagt attaaaccga ttagttgaaa atggtgatac
    11341 tgttgtaatt attgaacata acctagatgt tatcaaaaca gcagactata ttatagactt
    11401 aggtcctgaa ggtggtagtg gcggtggtac tattgttgcg actggcacac ctgaagatat
    11461 tgctcagaca aagtcatcat atacaggaaa gtatttaaaa gaagtacttg aacgagataa
    11521 acaaaatact gaagataaat aagataaaaa gaagtgaagg atgttgtaaa tttatccttc
    11581 gcttcttttt attaatttag taatgaatag tagaaagaaa agatgcgtaa aaagaattat
    11641 gttaagatag ggtcaatcta gagttgctaa acataaatcg aaactgagag tgggacagaa
    11701 atgataaaga atcactaatg atttattatg tagtgattct ttgtcattcg ccacaactat
    11761 tgtgtactta aaaataggaa tgcatgagtg c
//
LOCUS       DALMNS010000090        11774 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.090, whole genome shotgun sequence.
ACCESSION   DALMNS010000090 DALMNS010000000
VERSION     DALMNS010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11774)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11774)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11774
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.090"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(18..1877)
                     /locus_tag="O6Y56_002075"
     CDS             complement(18..1877)
                     /locus_tag="O6Y56_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase domain-containing protein"
                     /protein_id="HDB5575322.1"
                     /translation="MPKNKILIYLLSTTLVLPTLVSPTAYADTPQKDTTAKTTSHDSK
                     KSNDDETSKDTTSKDIDKADNNNTSNQDNNDKKFKTIDDSTSDSNNIIDFIYKNLPQT
                     NINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNGEKSTNDSNKNSDNSIKND
                     TDTQSSKQDKADNQKAPKSNNTKPNTSNKQPNSPKPTQPNQSNSQPASDDKANQKPSS
                     KDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKNEKSNTKNPQLPTQDELKHKS
                     KPAQSFNNDVNQKDTRATSLFETDPSISNNDDSGQFNVVDSKDTRQFVKSIAKDAHRI
                     GQDNDIYASVMIAQAILESDSGRSALAKSPNHNLFGIKGAFEGNSVPFNTLEADGNQL
                     YSINAGFRKYPSTKESLKDYSDLIKNGIDGNRTIYKPTWKSEADSYKDATSHLSKTYA
                     TDPNYAKKLNSIIKHYQLTQFDDERMPDLDKYERSIKDYDDSSDEFKPFREVSDSMPY
                     PHGQCTWYVYNRMKQFGTSISGDLGDAHNWNNRAQYRDYQVSHTPKRHAAVVFEAGQF
                     GADQHYGHVAFVEKVNSDGSIVISESNVKGLGIISHRTINASAAEELSYITGK"
     gene            2088..5039
                     /locus_tag="O6Y56_002076"
     CDS             2088..5039
                     /locus_tag="O6Y56_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhgE/Pip domain-containing protein"
                     /protein_id="HDB5575323.1"
                     /translation="MKNAFKLFKMDLKKVAKTPAVWIILAGLAILPSFYAWFNLWAMW
                     DPYGNTGHIKVAVVNEDKGDTIRGKKVNVGNTMVNTLKKNKSFDWQFVSREKADHEIK
                     MGKYFAGIYIPSKFTHEITGTLRKQPQKADVEFKVNQKINAVASKLTDTGSSVVVEKA
                     NEQFNKTVTRALLEEANKAGLTIEENVPTINKIKNAVYSADKALPKINDFANKIVYLN
                     NHQADLDKYANDFRKLGNYKGDILDAQKKLNEVNGAIPQLNEKAKLILALNNYMPKIE
                     KALNFAADDVPAQFPKINQGLNIASQGIDQANGQLNDAKGFVTQVRSRVGDYQDAIRR
                     AQDLNRRNQQQIPQNSAANNETSNSAPAAGNGVAPTPPSVPSGDTAPNSNNAPVSTTP
                     QSTSGKKDGQSFADITTTQVSTANENTQNITDKDVKSMEAALTGSLLSLSNNLDTQAK
                     AAQKDSQALRNISYGILASDKPSDFRESLDNVKSGLEYTTQYNQQFIDTLKEIEKNEN
                     VDLSKEIDKVKAANNRINESLRLVNQLSNALKNGSSGTAEATKLLDQLSKLDSSLSSF
                     RDYVKKDLNSSLVSISQRIMDELNKGQTALSNVQSKLNTIDQVINSGQSILKNGKTRI
                     DRLQTVLPSIEQQYISAVKNAQANFPKVKSDVAKAANFVRNDLPQLEQRLTNATASVN
                     KNLPTLLNGYDQAVGLLNKNQPQAKKALSDLADFSQNKLPDVEKDLKKANKIFKKLDK
                     DDAVDKLIDTLKNDLKKQAGIIANPINKKTVDVFPVKDYGSGMTPFYTALSVWVGALL
                     MVSLLTVDNKHKSLEPVLTTRQVFLGKAGFFIMLGMLQALIVSVGDLLILKAGVESPV
                     LFVLITIFCSIIFNSIVYTCVSLLGNPGKAIAIVLLVLQIAGGGGTFPIQTTPQFFQN
                     ISPYLPFTYAIDSLRETVGGIVPEILITKLIILTLFGIGFFVVGLILKPVTDPLMKRV
                     SEKVDQSNVTE"
     gene            complement(5151..6089)
                     /gene="manA"
                     /locus_tag="O6Y56_002077"
     CDS             complement(5151..6089)
                     /gene="manA"
                     /locus_tag="O6Y56_002077"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase, class I"
                     /protein_id="HDB5575324.1"
                     /translation="MALFLQPVFKDRIWGGHALKAFNYDIPNETTGECWAISAHPNGP
                     NIIINGPYKDMTLDQLWSQHRELFDNDSRDSFPLLTKVLDANDKLSVQVHPDDDYALK
                     HEGELGKTECWYILDAAPGAEIIYGVHAHNKQTLIDMIDNHEFDSLFKRIPVKPGDFY
                     YVPAGTVHAIGSGILILETQQSSDTTYRIYDYDRRDQNGQLRDLHLEQSKDVIELGNH
                     EPNTTPITTHIDTHTVNQFVDNQYFAIYKWDIHGDLKFNKPHAYCLVTIIDGTGTLTV
                     NDKHYDIQKGSSFILTTEDEDIHFVGNISAIVSHPG"
     gene            complement(6103..8055)
                     /locus_tag="O6Y56_002078"
     CDS             complement(6103..8055)
                     /locus_tag="O6Y56_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIABC"
                     /protein_id="HDB5575325.1"
                     /translation="MKIVAITSCPNGIAHTYMAQEKLEQVAKEMGVDIKVETQGGVGA
                     ENVLTTQDIEEADGVIIAADKQVDLSRFVGKRLINENVREGIHNPRGLIQRIINQDAP
                     IYQSETNYYSKDRDKSKSGIQMVYQHLMNGVSFMVPFIVVGGLLIAIALTLGGETTSK
                     GLVIPDDSFWKPIENIGSLAFKFMVPILAGYIAVSIADKPGLVPGMIGGAIAADGSFY
                     GSDAGAGFLGGIVAGFLAGYIAKWIKDIKVPKAMAPIMPIIIIPIISSVVVGLIFIFL
                     IGAPISNIFEALTTWLKSMQGANIIILAMIIGAMIAFDMGGPVNKVAFLFGSALIAEG
                     NYAVMGMVAVAVCTPPIGLGLATFVQKYKFNHSEREMGKASFTMGLFGITEGAIPFAA
                     QDPLRIIPANIIGAMIASVIAAIGGVGDRVAHGGPIVAVLGGIDHILWFIFAVIVGSL
                     VTMITVLLLKRNTPVIAVDAPAQHTQLHDTDITQHDTEVDNVDNTAKHSHLNKPSHVF
                     DQQTMIITDHDMSRNEAIDMLIHKLKICRYVEHTSHLKNAILEREMESTTAIGMNVAI
                     PHAKSDVVKQPIVAVMKNNHGVKWESLDGSLPQLIFLIAVPNNSQDTHLKILQRLSKA
                     LMNDETRQSLINANSTKEIYNLLMKI"
     gene            complement(8132..10006)
                     /locus_tag="O6Y56_002079"
     CDS             complement(8132..10006)
                     /locus_tag="O6Y56_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HDB5575326.1"
                     /translation="MLDRHLKLLQFFIKNPSKHISSNEIAEHVNVSNRTVRNDIHVIN
                     SNFMDDIIVSIKSKGYQLNTSQYTLETITERYTHIQSYKEKLLLSMAYQLLMHNKSQT
                     LQQLEQDYLLSKTVLNDYFVRIQQWCQKFNIALTIKKKQGIVVDGTDNDITNAIIHLN
                     QLSSGHVHVEDLILNELPDSHQRMISHIIQETLQQHSIETTDIQIQQLLIHLILIIKR
                     KQSLSELDTLNHDAKLISQSCIKQINERLGYDLNEKVINMFSFFIGYHFNKLDIGIER
                     IFIQSYIDRLIELMQQHIHVPFNEDSILQQNLYNHFSKAYLRITQNIYLNNPLVIEIK
                     KLYPFVFNTLFEAIDKLAIDTDIEMSEDEIAFLTIHFQAAIERRTKTQLNVVIACYYG
                     LGVSNFLETKINNLSEELSVINTIKLENITHYHFDNVDLLITTHDIPKQTLNILPKHL
                     TIIKVAPLFSEDDRHKIRHVVKQKQNPVQAHHHMDTVNFLVVNTEQKPRHTVQIFEEA
                     QKILQAHHAIVEGYIESALEREKSSSTYIGNFMAIPHGDPEKVLQSHVLIFRTKDVFP
                     WRQHDVKLVFFLAISHKDKAFTKQMMQLIANLDDDSVNHLCSLDDHSLKQQLFEYLQE
                     "
     gene            complement(10246..10704)
                     /locus_tag="O6Y56_002080"
     CDS             complement(10246..10704)
                     /locus_tag="O6Y56_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575327.1"
                     /translation="MKKLLITIVIIVLIGALGFAIYAAINHSTSSSNNQEQENKATHK
                     KTDTEENDQQDDSADKADKNQNNGNNVTNDNQPSLPSNVPNNHSTAPSNTQPAQPKDS
                     NTYKNNTHGSGSQSSTNNQNNQQQNTPPANKSNNTNTPSKQTPQAQSPKN"
     gene            10962..11489
                     /gene="isaB"
                     /locus_tag="O6Y56_002081"
     CDS             10962..11489
                     /gene="isaB"
                     /locus_tag="O6Y56_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunodominant staphylococcal antigen IsaB"
                     /protein_id="HDB5575328.1"
                     /translation="MNKTSKVCVAATLALGTLIGVTVVENSAPTSKQAQAAITPYYTY
                     NGYIGNNANFILDKNFINAIKYDNVKFNGIKLAKTDTIKKVEKYDQTFKGVSAKGNEA
                     SQLQFVVKNNISLKDIQKAYGKDLKKENGKTKEADSGIFYYQNAKKTLGIWFVVDHNR
                     VVEVTVGHTPYKTSK"
BASE COUNT         3853 a         1830 c         2107 g         3984 t
ORIGIN      
        1 cgggtttaat ataatactta tttacctgta atatatgata attcttcagc ggcagatgcg
       61 ttgatagttc tatgagaaat gatacctaat cctttaacat tggattctga aataacgata
      121 gaaccatcac tgttaacttt ttcaacaaat gctacatgac cgtaatgttg atctgcacca
      181 aattgtccag cctcaaatac aacagcagca tgacgttttg gtgtatgact tacttgataa
      241 tcacggtatt gagctcgatt attccaatta tgtgcatcac ctaaatcacc tgagatagat
      301 gtaccaaatt gtttcatacg gttatatacg taccaagtac attggccatg tggatatggc
      361 atactatcag atacctcgcg gaaaggtttg aattcatctg atgaatcatc ataatccttg
      421 atagaacgtt catatttatc taaatctggc atgcgttcat cgtcaaactg agttaattga
      481 tagtgtttaa taatactgtt taatttctta gcatagtttg gatctgtagc atacgtttta
      541 gataagtgtg atgttgcatc tttataagaa tcggcttccg atttccatgt tggtttataa
      601 attgttcgat tgccatcaat accattttta ataaggtcag agtaatcttt tagtgattct
      661 ttcgtgcttg gatattttcg gaatccagca ttaatactat acaattgatt accatcagct
      721 tctaatgtgt taaaaggaac agaattccct tcaaaagccc ctttgatacc gaataaatta
      781 tggtttggtg acttagctaa agcactacga cctgagtcag attctaagat tgcttgggca
      841 atcatgacag acgcataaat atcgttatct tgaccaatac gatgtgcatc tttagcaatt
      901 gattttacaa attgacgtgt atcttttgag tcaacaacgt taaattgtcc actatcatca
      961 ttgttagata tactaggatc tgtttcgaat aatgatgttg cacgtgtatc cttttgatta
     1021 acatcgttat tgaatgattg agcaggttta gatttatgtt tcaattcatc ttgtgttggt
     1081 aactgtggat tctttgtatt agatttttca tttttgtctt ttttagattg agatgcgtaa
     1141 tctttttgtg ttttctttgc atcttcactg tattgatcca aaatagagtc taaagccgaa
     1201 tctgacattg attgattatc tttcgatgaa ggtttttgat ttgctttatc gtcacttgct
     1261 ggttgactat ttgattgatt tggttgtgtt ggctttggcg aatttggttg cttattagat
     1321 gtatttggtt ttgtattgtt tgatttaggt gctttttgat tgtctgcttt atcttgttta
     1381 gatgattgcg tatcagtgtc atttttgatg ctattgtcac tgtttttatt cgaatcattt
     1441 gttgactttt caccattacg aggttgttcg taatcagaaa tatccgaatt taaattgaac
     1501 aagttttgga ttaaagttgt taatgagtaa ttatcatcgt atttattttt ggttagcaat
     1561 tggtttatat tggtttgtgg taaattctta taaataaaat caatgatatt gttagagtct
     1621 gaagtgctgt cgtctatagt tttaaatttt ttgtcgttat tgtcttggtt acttgtatta
     1681 ttgttgtctg ctttatcaat atctttactt gtagtatcct tagaagtttc atcgtcatta
     1741 gatttttttg aatcatgaga tgttgtctta gctgtagtat ctttttgagg tgtgtcagca
     1801 taagcggtag gtgaaactaa agtaggtaat acgagcgtag ttgatagcaa ataaattaaa
     1861 attttatttt taggcatatt tcgtattctc ccttgaaaaa tataataatt aagtgtgata
     1921 ataaactatg atttgttata atttatcgta tgctgaaaat agttgatagg tatcaatcga
     1981 ctaaatatct tccagtaaat tgattatact aattcacaac gcaaaaataa attaatttac
     2041 aaaaaatata taaaaaatat gaataattcc tacataggag tgtgacaatg aagaacgcat
     2101 ttaaattatt taaaatggat ctgaagaaag tagctaagac gccagctgtg tggattatct
     2161 tagcaggctt agctatttta ccatcgttct acgcttggtt taacttatgg gcaatgtggg
     2221 atccatatgg caacacggga cacatcaagg tcgcagtcgt taatgaagat aaaggcgaca
     2281 caatcagagg gaaaaaagtt aatgtcggta atacgatggt taatacactc aagaaaaata
     2341 aaagctttga ttggcagttt gtaagtagag agaaagctga tcatgagata aaaatgggta
     2401 aatattttgc aggtatttac atcccatcta agtttacaca tgaaattacc gggacactac
     2461 gtaagcagcc tcaaaaagca gatgtagaat ttaaggtgaa tcagaagatt aacgctgttg
     2521 cgtctaagct aacagatact ggttcgtcag ttgtcgttga aaaagcgaat gaacaattta
     2581 ataaaacagt aactcgagca ttattagaag aagctaacaa agcaggttta actattgaag
     2641 aaaatgtgcc gacaattaac aagataaaaa atgcggtata ttcagcagat aaagctttac
     2701 ctaagattaa tgactttgcg aataaaattg tatatttgaa taaccaccaa gcggatttag
     2761 ataaatatgc gaatgatttt agaaaactag gaaattataa aggtgatatt ttagatgctc
     2821 agaaaaaatt aaacgaagtc aatggtgcta ttccgcaact taatgaaaag gctaagttga
     2881 tattagcttt aaataattat atgccgaaaa ttgaaaaagc gttaaatttt gcagctgatg
     2941 acgtgccagc gcagttccct aaaattaatc aaggacttaa cattgcgagt caaggtattg
     3001 atcaagctaa tggacagtta aatgatgcca aaggcttcgt cacacaagtt agaagtagag
     3061 tcggtgatta tcaagatgca attcgacgcg cgcaagattt aaatcgaaga aatcagcaac
     3121 agattcctca aaatagcgcg gcgaacaacg aaacatcaaa tagtgcacct gcagctggta
     3181 atggtgtagc accaacgcca ccaagtgtac caagtggcga tactgcacca aatagtaata
     3241 atgcgcctgt atcgactaca ccacaaagta caagcggaaa aaaagatggt caaagttttg
     3301 cagatataac aacaacacaa gtcagcacag ctaacgagaa cacacaaaac attacagata
     3361 aagatgttaa atcaatggaa gcggcattaa cgggctcttt attatcatta tcaaataatt
     3421 tagataccca agcgaaagcc gcacaaaaag atagtcaggc attacgtaat atttcgtatg
     3481 gcattttagc atcggacaag ccttctgatt ttagagagtc tttagataat gttaagtccg
     3541 gtttagaata cacaactcaa tataatcaac aatttatcga tacattaaaa gagattgaga
     3601 agaatgaaaa tgttgattta tcaaaagaaa ttgataaggt aaaggcagct aataatcgaa
     3661 ttaatgaatc attaaggtta gttaatcaat taagcaatgc attaaagaat ggtagttcag
     3721 gaactgctga agctactaaa ttactagatc aactgtcaaa actagattca tcattatcat
     3781 catttagaga ttatgttaaa aaagatctta acagctcttt agtatcaata tcacaacgta
     3841 ttatggatga attgaataaa gggcaaacgg cattgtctaa tgttcagtct aagctaaata
     3901 caattgatca agtcatcaac agtggtcaat ctattttaaa aaatggtaaa acacgtatcg
     3961 atcgtttaca aacagtatta ccaagtattg aacaacaata cattagtgct gttaaaaatg
     4021 ctcaagcaaa cttcccgaaa gtgaaaagtg atgtagcgaa agcagctaac tttgtacgta
     4081 acgatttacc acagttggag caacgtttaa ccaatgcgac agcaagtgtg aataaaaatt
     4141 taccaacgtt attaaatggt tatgatcaag cggtaggatt actaaataaa aatcagccac
     4201 aagcgaaaaa ggctttatca gatttagctg atttttctca aaataaattg cctgatgttg
     4261 aaaaagattt gaaaaaagcg aataaaattt tcaagaaatt agacaaagat gatgcagtcg
     4321 acaaattaat cgatacactt aagaatgatt tgaaaaagca agcgggtatt attgcaaatc
     4381 ctattaataa gaagactgtt gatgttttcc cagttaagga ttatggttca ggtatgacac
     4441 cattctatac tgcactgtcg gtatgggtag gcgcactctt aatggtaagc ctattaactg
     4501 ttgataataa acataagagc ttagagccag tgttaacgac acgacaagta ttcttaggta
     4561 aagcaggatt ctttataatg cttggtatgt tgcaagcact cattgtatcg gttggagatt
     4621 tgttaatcct aaaagcaggg gttgagtcac ctgtattatt cgtacttata acgattttct
     4681 gttcgattat tttcaactca atcgtatata cgtgcgtatc attacttggc aacccaggta
     4741 aagccattgc aatcgtattg cttgtattac aaattgcagg tggtggagga acattcccaa
     4801 ttcaaactac gccacaattt ttccaaaaca tttcgccata cttaccattt acgtatgcaa
     4861 ttgattcatt acgtgaaaca gtaggcggta ttgttccgga aatcttaatt acaaaattaa
     4921 ttatattaac gttatttggc ataggattct tcgttgtagg tttaatttta aaacctgtaa
     4981 cagatccatt gatgaagcgc gtatctgaaa aagttgacca aagtaacgtt acagaataaa
     5041 aattaaatcc acacattagg gttatagctc cttaatgtgt ggatttttat gtttttagac
     5101 agaagagata gtaatttctg tcttttatgg gacgggtgtt atcattgcta ttatccagga
     5161 tgacttacta tagcactaat attaccgaca aagtgaatat cctcgtcttc cgtagttaaa
     5221 ataaagctag aacctttttg gatgtcatag tgcttatcgt ttactgttaa agtaccagta
     5281 ccatcgataa ttgtaaccaa gcaataagca tgtggtttat tgaattttaa atctccatga
     5341 atatcccatt tatatattgc aaaatattga ttatctacaa attgatttac agtgtgtgtg
     5401 tcgatgtgag ttgttatagg agtagtattt ggttcatgat tgcctaattc aatcacatct
     5461 ttactttgct ctaagtgcaa gtcacgcaat tgaccatttt gatctcgtct atcatagtca
     5521 taaatacggt atgtcgtatc ggatgattgt tgtgtctcta aaattaaaat acccgaacca
     5581 atggcatgga cagtgccagc aggaacataa taaaagtcac cgggcttaac aggtatacgt
     5641 ttgaaaagac tgtcaaattc atgattatca atcatgtcga ttaacgtctg tttattatgt
     5701 gcatgtacgc catatataat ttcagcacct ggggctgcat ctaaaatata ccaacattct
     5761 gttttaccta gttcgccttc gtgttttaaa gcgtaatcat catctggatg aacttgaaca
     5821 gataatttat cattggcatc taatacttta gttagcagag ggaaactatc tcgtgaatca
     5881 ttatcgaata attcacgatg ttgtgaccaa agttgatcta gggtcatatc cttgtatgga
     5941 ccattgataa ttatattagg accatttgga tgtgcagaaa ttgcccagca ttcaccagtt
     6001 gtttcattag ggatatcata gttaaatgct tttaatgcat gaccgcccca aattctgtct
     6061 ttaaaaacgg gttgtaaaaa taatgccata gttaaaactc ctctatattt tcattaataa
     6121 gttataaatt tctttagtac tgtttgcatt aattagtgat tggcgtgtct catcattcat
     6181 taacgcttta gataagcgtt gaagtatttt taaatgtgta tcctgactgt tgtttggtac
     6241 ggcaattaag aatatcaatt gaggtagact accatctaga ctttcccatt taacaccatg
     6301 attatttttc ataacagcta caatcggttg ttttacaaca tcagactttg catgtggaat
     6361 ggccacgttc atgccaatag ctgtcgtaga ctccatttca cgttctagga tcgcattttt
     6421 taaatgcgat gtgtgctcta cataacggca aattttaagt ttatgaatca acatatcaat
     6481 tgcttcgtta cgagacatgt cgtgatcagt aattatcata gtttgttgat caaaaacatg
     6541 agaaggttta ttgagatgtg aatgtttcgc ggtgttatcg acattgtcaa cctctgtatc
     6601 atgttgtgtt atatctgtat catgaagttg cgtgtgttgc gctggtgcat ctactgctat
     6661 aactggtgta ttgcgtttta ataatagtac agtaatcatt gtgacaagac tacctactat
     6721 cactgcaaag ataaaccata atatatgatc aataccacct aatacagcca cgattggacc
     6781 tccatgtgcg actctatcgc cgacaccacc aatggctgca atgactgatg caatcattgc
     6841 accaatgatg tttgcaggta taatgcgcaa tggatcttgc gctgcgaaag gaatagcacc
     6901 ttcagtaata ccaaatagtc ccatagtgaa ggaagcctta cccatttctc tttcagaatg
     6961 attgaattta tacttttgaa caaacgttgc taaacctaaa ccgattggtg gtgtacatac
     7021 agcaactgcg accataccca taacggcgta attaccttca gcaataagtg ctgagccaaa
     7081 taaaaatgct actttgttta ctggaccgcc catatcgaag gcgatcatcg cacctataat
     7141 catcgcaagt ataataatat tagcaccttg catacttttt aaccaggttg ttaatgcctc
     7201 aaaaatatta gaaattggtg caccgattaa aaatataaat atcaatccta caacgaccga
     7261 tgaaataatg ggaataataa tgataggcat aattggtgcc attgcttttg gaactttaat
     7321 atctttaatc cactttgcga tataacctgc taagaaacca gcaacaatac cacctaaaaa
     7381 tcctgcgcct gcatcactgc cataaaaact accgtcagca gcgatagcgc cgccaatcat
     7441 accaggaaca agtcccggtt tgtcagcgat actaacagcg atatatccag ctagtattgg
     7501 aaccataaat ttaaaggcta aactaccaat gttttcaatg ggtttccaaa atgaatcatc
     7561 tgggatgact aatccttttg atgtcgtttc accgcctaga gtcagcgcga tggcgataag
     7621 gagtccacca actacgataa aaggaaccat aaacgataca ccgttcatta aatgttgata
     7681 caccatttga ataccacttt tagacttatc gcgatctttc gaataataat ttgtttcaga
     7741 ttgataaata ggcgcatctt gattaatgat acgttgaatt agacctctcg gattatgaat
     7801 cccttcgcga acattttcat taatcaaccg tttaccaaca aatcgggaca gatcaacttg
     7861 tttatcagct gcaattatga caccgtcagc ttcttcgatg tcttgcgtag ttaaaacatt
     7921 ttcagcacca acaccgccct gtgtctctac tttaatatcc acacccattt cttttgctac
     7981 ctgctcaagt ttttcttgag ccatatatgt atgtgcaatg ccatttgggc acgaggtaat
     8041 agctacaatt ttcataaaat catctccttt tctatattgt aagcgcattc tcgatactaa
     8101 aaaaaagaat aattaccgtt actagtggca attattcttg taagtattca aataactgtt
     8161 gctttaaact atgatcatct aaactacata aatggttcac tgaatcatca tccaagttag
     8221 caattaattg catcatttgt tttgtaaaag ctttgtcttt atgcgaaatc gctaagaaaa
     8281 agacaagttt gacatcgtgt tgtcgccaag gaaaaacatc ttttgtacga aaaataagca
     8341 catgtgattg taaaactttt tcaggatctc catgaggaat cgccataaaa ttacctatgt
     8401 atgtagaaga tgatttctca cgctctaaag ctgattcgat atatccttct acaatcgcat
     8461 gatgtgcttg taatattttt tgagcttctt caaaaatttg cacagtatgt cgtggttttt
     8521 gttcagtatt tacgacaagg aaattgacag tgtccatatg atgatgtgct tgaaccggat
     8581 tttgcttttg cttcacaacg tgtctgattt tgtgacggtc atcttcagaa aataatggtg
     8641 caaccttgat aatcgttagg tgcttaggaa gtatgtttag cgtttgtttt ggaatatcat
     8701 gggtcgttat taataaatct acattgtcaa agtgatagtg tgttatattt tctagtttaa
     8761 tcgtatttat cactgacaac tcttcggata agttatttat tttagtttct aaaaaattcg
     8821 agacacctag accataataa caagcgatga ctacatttaa ttgtgttttg gtacgacgct
     8881 cgatggcagc ttgaaaatga atggttaaaa aggcaatttc atcttcgctc atctctatat
     8941 cagtatcaat tgctaattta tcaatcgctt caaaaagtgt gttaaacaca aagggataga
     9001 gttttttaat ctctataact aaaggattgt ttaaataaat gttttgagtg atacgtaaat
     9061 atgctttact aaaatgatta tataaatttt gttgtaaaat cgaatcttca ttgaaaggta
     9121 catgaatatg ttgctgcatc aattcgatta agcgatcaat ataactttgt ataaatatac
     9181 gttctatgcc aatatcgagt ttattaaaat gataaccaat aaagaatgaa aacatattga
     9241 ttactttttc gttcaagtca taacctaatc tttcgttgat ttgcttaatg caagattgag
     9301 atatcaattt tgcatcgtgg tttaacgtgt ctagctcact taaagattgc ttacgtttaa
     9361 tgattaaaat gagatgaatt aaaagctgtt gtatttgaat atcagttgtt tcaatactat
     9421 gttgttgaag tgtctcttgt ataatatgcg aaatcatcct ttggtgtgaa tcaggtaatt
     9481 catttaaaat taggtcttca acatgtacat gccctgatga taattgattt aaatggatga
     9541 tggcattagt gatatcatta tctgttccat cgaccacaat accttgtttt ttcttgattg
     9601 ttaaagcgat attaaatttt tgacaccatt gttgaattcg aacgaaatag tcgttgagca
     9661 cagttttaga taatagataa tcttgctcta gttgttgcaa tgtctgcgat ttattgtgca
     9721 ttagcagttg atacgccata gataataata gtttttcttt atatgattga atatgcgtgt
     9781 aacgttcagt tatcgtttct aaggtatact gcgatgtatt taattgatat cctttagatt
     9841 taatacttac gatgatatca tccataaaat tgctattgat aacatggata tcattgcgaa
     9901 ctgtgcggtt tgaaacattg acatgttcag caatttcatt agaactaatg tgctttgatg
     9961 gatttttaat aaaaaactgg agtagtttta agtgtctatc aagcatttaa catgtacctc
    10021 ctttctaaat tttccgtgta agcgttttta aaggtgtatt aatattatta aacatgagag
    10081 cttatacata cgtcaatgac attaaagcga acttttatat gaatttaaca gagtgcgaat
    10141 tatgcaaata aagaacagca gtaagatatt tcaaatagaa gaatatctta ctgctgtttt
    10201 tctgaattta tttacctgat acttgtggac gtatcaggta aatgattaat ttttaggtga
    10261 ttgtgcttga ggtgtttgtt tagaaggcgt attggtatta tttgatttat tagcaggtgg
    10321 tgtgttctgt tgttgattat tttggttgtt tgttgacgat tgactgccac taccgtgagt
    10381 attattttta tatgtatttg agtcttttgg ctgagctggt tgcgtattcg aaggtgctgt
    10441 tgaatggttg ttaggaacat ttgacggtaa agatggttga ttgtcattag taacgttatt
    10501 gccattattt tgatttttat ctgctttgtc tgcactatca tcttgttgat cattttcttc
    10561 ggtgtctgtc tttttatgcg tagctttatt ttcttgttct tggttattac ttgatgatgt
    10621 agaatgattt attgcagcat aaattgcgaa cccaagtgct ccgattaata cgataattac
    10681 gatggtaata agaagttttt tcaaatataa cgcctccatg ttaatgaaaa gtagtcgata
    10741 cgtgaagcta aataatttat ttcaatattg ccataatcat tttaaaaaat aaatattaga
    10801 aaattagacg atattaatat tttcattgtt ttttgtgtac ttcaattagt ataacaaaac
    10861 tgttatgtat ttataaatat aatcattagt atttttatgg ctgaaaaagt tataataaaa
    10921 gtgtaaggaa taaaatattt gtatggaaaa gagagataat tatgaataaa accagtaaag
    10981 tttgtgtagc agcaacatta gcattgggca cactgattgg agtaacagtt gttgaaaatt
    11041 cggcgccaac aagtaaacag gcacaggcag caataacccc atattatact tacaatggtt
    11101 atattggtaa taatgctaat tttattctgg ataagaattt tattaacgcg attaagtatg
    11161 ataacgtgaa attcaatggt attaaattag ctaaaacgga tacgataaaa aaagtagaga
    11221 aatatgatca aacttttaaa ggtgtttctg caaaaggaaa cgaagcaagt caattgcaat
    11281 ttgtagttaa aaataatatt tcattaaaag atatccaaaa agcttatggc aaggacttga
    11341 aaaaagaaaa tggtaaaaca aaggaagctg atagcggtat tttttactat caaaatgcta
    11401 aaaagacatt aggaatctgg tttgtcgttg atcataatag agttgtcgaa gtaacagttg
    11461 gacatacacc atacaaaaca agtaaataaa ataataacat attaaggcta gagtgtgagg
    11521 agtgataccg cattctagtc ttttttatta tatgatggta gttttggtgt ctccatgata
    11581 ttgaaatata tagatttaat catgcacagt taagtagtca gtatacatat ttcaagcatt
    11641 gattaagtat atagagcact attttgtatt tgttaatatt ttcacaaaaa taaagccttg
    11701 ataaatttta aaatataatt aagcccaatt tttaaaattt tatttagtca cagataacat
    11761 ttttaaaaaa gaaa
//
LOCUS       DALMNS010000091        11758 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.091, whole genome shotgun sequence.
ACCESSION   DALMNS010000091 DALMNS010000000
VERSION     DALMNS010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11758)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11758)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11758
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.091"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            87..1307
                     /locus_tag="O6Y56_002082"
     CDS             87..1307
                     /locus_tag="O6Y56_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter"
                     /protein_id="HDB5575329.1"
                     /translation="MDMFAALLQIKNYKLFVVNMFLLGMGIAVTVPYLVLFATKDLGM
                     TTNQYGLLLASAAISQFTVNSIIARFSDTHHFNRKIIIILALLMGALGFSIYFFVDTI
                     WLFILLYAIFQGLFAPAMPQLYASARESINVSSSKDRAQFANTVLRSMFSLGFLFGPF
                     IGAQLIGLKGYAGLFGGTISIILFTLVLQVFFYKDLNIKQPISTQQHVEKIAPNMFKD
                     KTLLLPFIAFILLHIGQWMYTMNMPLFVTDYLKENEQHVGYLASLCAGLEVPFMIILG
                     VLSSRLQTRTLLIYGAIFGSLFYFSIGVFKNFYMMLAGQVFLAIFLAVLLGIGISYFQ
                     DILPDFPGYASTLFSNAMVIGQLGGNLLGGAMSHWVGLENVFFVSAASIMLGMILIFF
                     TKNQKITKEDVIST"
     gene            1304..1792
                     /locus_tag="O6Y56_002083"
     CDS             1304..1792
                     /locus_tag="O6Y56_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HDB5575330.1"
                     /translation="MTIILWLLIIAAFMLAFVGLIKPVIPSVLVLWVGFLIYQFGFHN
                     QHLSWVFYVSMALLTILILCADFLANKYFVNRFGGSKFGEYAALIGVVIGCFVLPPFG
                     IIIIPFILVFIVELIQGYSFERAVKVSIGSIVAFLTSSIAQAIIMFIMIVWFFIDALL
                     IN"
     gene            complement(1891..2580)
                     /locus_tag="O6Y56_002084"
     CDS             complement(1891..2580)
                     /locus_tag="O6Y56_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1129 family protein"
                     /protein_id="HDB5575331.1"
                     /translation="MKSTAQLTKENNVKSLRLSNTDREIFENYMTYMRSDFRVNPHDT
                     ELIINRILKQLLSAEQHGLLALDFFNHDPKAHAIKELKAMPNETFKNIFKYIYQHIVL
                     LIGIVSFLKGFLGFFMEKSGSNLYFVSFPFSVVVGFFIVFLFIWFSFKTIQLQCFNNS
                     NWIWIFTYLAIILLIVGFFYVFFIPQSLLAFGPYIQVSNWVFIIFSFIVMPIGLRIER
                     NISKKHSHTFL"
     gene            2707..3150
                     /locus_tag="O6Y56_002085"
     CDS             2707..3150
                     /locus_tag="O6Y56_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5575332.1"
                     /translation="MRTLNKDEHNYIKQIANIHETLLSQAESNYKCTKLSIALRYEMI
                     CSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMVNIELLYVEPQFRKLGIATQLKIA
                     LEKWAKTMNAKRISSTIHKSNLPMISLNKDLGYQVSHVKMYKDID"
     gene            3217..3600
                     /locus_tag="O6Y56_002086"
     CDS             3217..3600
                     /locus_tag="O6Y56_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575333.1"
                     /translation="MKKLIISIMAVMLFLTGCGKSEEKASLEKDIDKLEKENKELKDK
                     KEKLKQEKEKLADKQKDLEKEVKDLKPSKEDNKDDKKDEDKNKDKEASQDKQSEDQTK
                     SSDKDNHKKPTSTDKDQKANDKHQS"
     gene            3738..4037
                     /locus_tag="O6Y56_002087"
     CDS             3738..4037
                     /locus_tag="O6Y56_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575334.1"
                     /translation="MHEQDFRILEGQDITLPELGRELENITGRTIADSTGEIKRVIAH
                     LPNFESDTDTFVATYRLNHQQDFIDATFTALKSDRARLKEVPVHVELISYISKSK"
     gene            4117..4659
                     /locus_tag="O6Y56_002088"
     CDS             4117..4659
                     /locus_tag="O6Y56_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5575335.1"
                     /translation="MIYCETERLILRDWHEDDLLPFQKMNANYDVRKYFPSLLSYRRS
                     ELDMRTMDAVIKDYGIGLFAVEDKESHQWIGFIGLNYIPETSDYPFKELPLYEIGWRL
                     LPEFWGKGLATEGAKATLKLAEEHQIYDVYSFTAEANKASQRVMEKIGMTVYDHFELP
                     NLSKYHLLKRQVRYYINLRK"
     gene            complement(4755..5321)
                     /locus_tag="O6Y56_002089"
     CDS             complement(4755..5321)
                     /locus_tag="O6Y56_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HDB5575336.1"
                     /translation="MKRIAVYCGASKGHDPSYVQKAYDLGKYFAEQGYELVFGAGSIG
                     IMGAIQDGVLDHGGKAIGVMPKMLDEHEITSQRLTELILVDSMHERKNKMAELADAFV
                     MAPGGAGSLEEFFEMYSWAQIGIHEKPIAIYNINGFFNPLQTMIDHMIEEGFIDPKYR
                     ALAPLCDTKESLIESILNFKPLGTRSYD"
     gene            complement(5323..5781)
                     /locus_tag="O6Y56_002090"
     CDS             complement(5323..5781)
                     /locus_tag="O6Y56_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HDB5575337.1"
                     /translation="MTHIIIDGDACPVVDSIIDLTTETGIFVTIIRSFSHFSNQLYPP
                     HVSTLYVDDGPDAVDYKIVQLSTKDDIVITQDYGLASLLVDKVLIVMHHNGKIYNSKN
                     IQQLLDKRYMNAQIRKQGGRHKGPPPFTKQDQKVFEQSLLKVIHRIKELD"
     gene            complement(5784..6467)
                     /locus_tag="O6Y56_002091"
     CDS             complement(5784..6467)
                     /locus_tag="O6Y56_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575338.1"
                     /translation="MDKKKVIKFMINVLPIVLVPLIVERKRIKQHPDVQKVTDATSKV
                     ASKTSAAISNTASDVKEYVGDKKQDFENKRELKKFAREHDPAYIEKKGEKLAKQNRKD
                     ADKMNKILQKNIEKRHKEEQKAREKNEIQRIKDMKKSQKYEVKAGLTPNKLDEKTEKK
                     GDKLAEKNRKEIAKMNKKLQKNIEKRHKEEQKRQQEADKARIKSFKKYKDYVAKSASQ
                     QNKENNTEA"
     gene            complement(6638..7513)
                     /locus_tag="O6Y56_002092"
     CDS             complement(6638..7513)
                     /locus_tag="O6Y56_002092"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HDB5575339.1"
                     /translation="MFIIELIKGIILGVVEGLTEFAPVSSTGHMILVDDMWLKSSEFL
                     GSQSAFTFKIVIQLGSVFAAAWVFRERFLEILHIGKHKHVEGQNDQQRRSKPRRLNLL
                     HVLVGMVPAGILGLLFDDFIEEHLFSVPTVMIGLFVGAIYMIIADKYSVKVKNPQTVD
                     QINYFQAFVIGISQAVAMWPGFSRSGSTISTGVLMKLNHKAASDFTFIMAVPIMLAAS
                     GLSLLKHYQDIQIADIPFYILGFLAAFTVGLIAIKTFLHLINKIKLIPFAIYRIVLVI
                     FIAILYFGFGIGKGI"
     gene            7732..9363
                     /locus_tag="O6Y56_002093"
     CDS             7732..9363
                     /locus_tag="O6Y56_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HDB5575340.1"
                     /translation="MKKLTTILFQYKIFPVLMFLVSTGLGILVITQNILIADFLAKII
                     RHQFQGLWIVLFILLGVLLLRATVQFLNQWLGDTLAFKVKHMLRQRVIYKNNGHPIGE
                     QMTILTENIDGLAPFYKSYLPQVFKSMMVPLIIIIAMFFIHFNTALIMLITAPFIPLF
                     YIIFGLKTRDESKDQMTYLNQFSQRFLNIAKGLVTLKLFNRTEQTEKHIYDDSTQFRT
                     LTMRILRSAFLSGLMLEFISMLGIGLVALEATLSLVVFHNIDFKTAAIAIILAPEFYN
                     AIKDLGQAFHTGKQSEGASDVVFEFLEQPNNNNEFLLKYEENQKPFIQLTDISFRYDD
                     SDRLVLSDLNLEIFKGDQIALVGPSGAGKSTLTHLIAGVYHPTIGTISTNQRDLNIGI
                     LSQQPYIFSASIKENITMFKDIENNIVEEVLDEVGLLDKVQSFTKGINTIIGEGGEML
                     SGGQMRRIELCRLLVMKPDLVIFDEPATGLDIQTEHMIQNVLFQHFKDTTMIVIAHRD
                     NTIRHLQRRLYIENGRLIADDRNISVNITENGDDL"
     gene            9360..11033
                     /locus_tag="O6Y56_002094"
     CDS             9360..11033
                     /locus_tag="O6Y56_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding/permease
                     protein"
                     /protein_id="HDB5575341.1"
                     /translation="MKTRLKFQVDKDLLLAIVVGVCGSLVALAMFFLSGYMVTQSALG
                     APLYALMILVVTVKLFGFLRAITRYVERLISHKATFTMLRDIRVQFFGKLVNVIPNVY
                     RKLSSSDLISRMISRVEALQNIYLRVYYPPVVIGLTALVTVIVLAFISIGHALLIMVS
                     MLFTLLIVPWLSSKKARTLKKHAANEQARFLNHFYDYKAGMDELRRFNQINHYRDNLM
                     DKLNHFDKLQLKEQRFLTIYDFILNIIAMLSIFGSLVLGLIQINEGQLNIIYMTSIVL
                     MILTLFEQAVPMTNVAYYKADTDQALHDINEVISVPSTNGKNRLNDKYDATNIYEVKD
                     ASFKYWNQQTYVLSDINFNVNRGEKIAIVGPSGSGKSTLLQIMAGLYQLDSGSIRFEN
                     MDMFKIDDKDKFESLNVLLQSQQLFDGTIRQNLFTDEKDEAVQAIFKQLDLEHLALER
                     QIDLDGHTLSGGEIQRLAIARMLLKDTASTWILDEPTTALDKQNSLKVMDLIEAHAET
                     LIVATHDLTLLSRFETIIVMINGKIVEKGNYQQLLANQGALWNMVQYNA"
     gene            complement(11160..11603)
                     /gene="mgrA"
                     /locus_tag="O6Y56_002095"
     CDS             complement(11160..11603)
                     /gene="mgrA"
                     /locus_tag="O6Y56_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MgrA"
                     /protein_id="HDB5575342.1"
                     /translation="MSDQHNLKEQLCFSLYNAQRQVNRYYSNKVFKKYNLTYPQFLVL
                     TILWDESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKS
                     ETIRPELSNASDKVASASSLSQDEVKELNRLLGKVIHAFDETKEK"
BASE COUNT         3951 a         1707 c         1998 g         4102 t
ORIGIN      
        1 acaaaggaac gcagttgatt gctaatgcat caactgcata agagccccta attaataaat
       61 taaaaggggc tctaagaagc ggggttatgg atatgtttgc agcgttatta caaataaaga
      121 attataaact ctttgttgtt aatatgtttc tactaggtat gggtattgcg gttacggtcc
      181 catatcttgt tctttttgca actaaagatt taggtatgac aacaaatcag tatggattac
      241 ttctagcatc tgcagcgatt agccagttta cagtaaattc aattattgct agattttcgg
      301 atacgcatca ctttaataga aaaattatta ttattctcgc attattaatg ggtgcgcttg
      361 gtttttcaat atactttttt gtagatacaa tctggttatt catattacta tatgcgattt
      421 tccaaggatt atttgcacca gcaatgcccc aactttacgc atctgctaga gaatctatca
      481 atgtttcaag ctctaaagat agagctcaat ttgccaacac agtattacgt tcaatgttct
      541 cattgggctt tttatttggt ccatttattg gtgcgcaatt aatcggatta aaaggctatg
      601 ctggattgtt tggtggaaca ataagtatca ttttatttac tttagtactt caagtgtttt
      661 tctataagga tttaaacatt aaacaaccta ttagtacgca acaacatgtt gaaaaaattg
      721 ctcctaatat gtttaaagac aaaacgcttt tattaccatt tattgcattt attttattac
      781 acattggaca atggatgtat acgatgaata tgcctttatt tgttactgat tatttaaaag
      841 aaaatgagca acatgtcggt tatttagcta gtttatgtgc tggtttagaa gtgccattta
      901 tgatcattct tggcgtttta tcatctagat tacagactcg aacattgttg atttatggag
      961 cgatttttgg tagtttattc tacttcagca taggggtatt taaaaacttc tatatgatgt
     1021 tagcaggaca ggtattttta gctattttct tagcggttct tttaggaatt ggcattagtt
     1081 atttccaaga tatcttacca gatttcccag gctacgcctc aacactattt tctaatgcaa
     1141 tggttattgg acagttaggc ggtaacttat taggtggtgc tatgagtcac tgggtaggtt
     1201 tggaaaatgt attttttgta tcagcagcat caatcatgtt aggtatgata cttatattct
     1261 ttactaaaaa tcaaaaaatt acaaaagagg atgtgatatc aacatgacaa ttattttatg
     1321 gctacttatc atcgctgcct tcatgttagc atttgttggg ttgattaagc cggttattcc
     1381 ttctgtttta gtgttatggg ttggctttct aatctatcaa tttggctttc ataatcagca
     1441 tttatcatgg gtgttttatg tatctatggc attgctaaca atattaattt tatgtgcgga
     1501 ctttttagct aataaatatt ttgtgaatcg cttcggtggt tctaagtttg gagagtatgc
     1561 agctttaatt ggtgttgtta ttggatgttt tgtattaccg ccatttggaa ttattattat
     1621 accttttatt ttggtattca tagttgaatt aatacaaggc tattcatttg aaagagcagt
     1681 taaagtaagt ataggttcaa tcgtagcatt tttaacaagt agtatagctc aagcaatcat
     1741 tatgtttata atgattgtat ggttctttat agatgcttta ttgattaatt aataaaaagc
     1801 ttattgcaaa atatgttttt cggtaactgt aatttagtga ttttatcatt aacagtacca
     1861 aattagcata tgatgtaata agctttttgt ttataaaaat gtatgagaat gttttttcga
     1921 aatatttctt tcaatgcgta atccaatagg cataactata aatgaaaata taataaatac
     1981 ccaattgctt acctgaatat atggtccaaa ggcaagtaat gattgtggaa taaagaatac
     2041 atagaaaaat cctacaatta gtagaatgat tgccaaatag gtgaatatcc atatccaatt
     2101 tgaattgtta aaacactgca gttgtattgt tttaaaacta aaccatataa ataaaaagac
     2161 aataaagaat ccaacgacta ctgaaaacgg aaatgaaaca aaatataaat tacttccact
     2221 tttttccatg aaaaatccta aaaatccttt gagaaaacta acaatcccaa ttaatagaac
     2281 gatgtgctga tatatatatt taaaaatatt tttaaatgtc tcattaggca tcgcttttag
     2341 ttcttttatt gcatgtgctt ttgggtcgtg attgaaaaaa tctaaggcta ataaaccatg
     2401 ttgttctgcg cttaataatt gtttaagtat acggttaata attaactctg tatcatgagg
     2461 attgacgcga aagtcagagc gcatataagt catataattc tcgaagattt ctctatcagt
     2521 attgcttaat cttaatgatt taacattatt ttcttttgtt aattgcgcag tacttttcat
     2581 tgttacttaa gcgctccttt aaaaatgttt aattccaaat taaaatggaa atgattttat
     2641 agtattaata aggtcaatca tatcatatta aacgcataaa tataacgatt aatattggag
     2701 aggaaaatga ggacacttaa taaagatgaa cataattata tcaagcaaat agctaatata
     2761 catgagacat tattgtcgca agcagaatcc aactataaat gtactaaact gagtattgct
     2821 cttaggtacg agatgatatg ttcaagatta gaacatacaa atgataaaat ttatatatat
     2881 gaaaatgaag gtcaattaat agcgtttatt tggggacatt ttagtaatga aaaaagtatg
     2941 gttaacattg aactgctata tgttgaacca caatttcgca aactgggaat agctacgcaa
     3001 ctgaagattg cgcttgaaaa atgggctaaa actatgaatg caaagcgaat aagcagtaca
     3061 attcataaaa gtaatttgcc aatgatatct ttgaataaag atttaggtta tcaagtgagt
     3121 catgtgaaaa tgtataaaga tattgattag aattaggatt atgttgctaa ttcatgttaa
     3181 aattaaaaaa gatttaatga cgttaaggag ttttatatga agaaattaat catcagtatt
     3241 atggcggtca tgctattttt aacaggttgc ggtaaaagcg aagaaaaagc atctcttgaa
     3301 aaagatatcg ataagttaga aaaagaaaat aaagaattaa aagataaaaa agaaaagcta
     3361 aaacaagaaa aagaaaaatt agcagataag caaaaagacc ttgaaaaaga agtgaaagat
     3421 ttaaaacctt ctaaagaaga taacaaggat gataaaaaag acgaagacaa aaataaagat
     3481 aaagaggcat cacaagataa gcaatcagaa gatcaaacta agtcatcgga taaagataat
     3541 cacaaaaagc ctacatcaac agataaagat caaaaagcta atgacaaaca ccaatcataa
     3601 ttgaattgct tacttgttat agatgaaagg tacagcgttt taaaccttat tttaagggta
     3661 tgtattaatt aaaatgtggt catgattgaa acagaacgta aaaatagaca acgtaattaa
     3721 taaaggagag aaacggcatg catgaacaag attttagaat tttagagggt caagatatta
     3781 ctttgccaga attaggtaga gaattagaaa atattacagg gcgcacgatt gctgattcta
     3841 ctggcgaaat taagcgtgta attgcacatt taccaaactt tgagtccgat acagatactt
     3901 ttgttgctac atatcgttta aaccatcaac aagattttat agatgcaact tttactgcgc
     3961 tgaaatcaga tagagcacgt ttaaaagaag tgccagttca tgttgaactt ataagctata
     4021 tttctaaatc aaaataaact gctatctaaa acgcaaagtt gatcaaaata tcgattttgt
     4081 gttttttatt gagaaattat ataggagtgt caatcgatga tttattgtga aacagagcgt
     4141 ttaatattaa gagactggca tgaagatgat ctgttacctt ttcaaaaaat gaatgcgaat
     4201 tatgacgtac gtaaatattt tccaagttta ttgagttatc gtcgttcaga attagatatg
     4261 agaactatgg atgcggttat taaagattat ggcattggat tatttgctgt agaagataaa
     4321 gagtcccatc aatggatagg ctttataggt ttgaattata ttccagaaac aagcgattat
     4381 ccatttaaag aattaccgct ttatgaaata ggttggcgct tgttgccaga attttgggga
     4441 aaaggattag caactgaagg cgcaaaggca acgttgaagt tagcagaaga acatcaaata
     4501 tacgatgtct atagttttac agcagaagca aataaagctt cacaacgtgt aatggaaaaa
     4561 attggcatga cagtgtatga tcatttcgaa ttacccaatc taagtaagta tcatttatta
     4621 aaaaggcaag tgcgctatta cattaatctt cgaaagtgaa aaatttatac ataagcgtaa
     4681 caaacacccc taacattgtt tagctgatga taacaatatt aggggtgttt gtttattttt
     4741 taaccttaga atgattaatc gtatgaacga gtacctagag gtttgaaatt taatattgat
     4801 tctattaatg attccttagt gtcgcataac ggtgcaagtg cacgatactt tggatcaata
     4861 aaaccttcct caatcatatg gtcaatcatt gtttgtagtg gattgaaaaa gccattaata
     4921 ttataaatgg caataggctt ttcatggata cctatttgag cccaactata catttcgaaa
     4981 aactcttcta gtgaacctgc gccaccagga gccatgacaa atgcatctgc aagttctgcc
     5041 attttatttt tacgttcatg catagaatca actaaaatta attcagttaa acgttggctt
     5101 gtgatttcat gttcatctaa cattttaggc atgacgccaa tagctttgcc gccatgatct
     5161 aatacaccat cttgaatggc acccataata ccaattgacc ctgcaccaaa tactaattca
     5221 taaccttgtt cagcaaaata tttacctaaa tcgtatgctt tttgtacata tgaagggtca
     5281 tgacctttgc ttgcaccaca ataaactgcg attcgcttca tattaatcca gctccttaat
     5341 tcgatgaatg acttttaata gtgattgttc aaacactttt tgatcttgct ttgtaaaagg
     5401 tgggggacct ttgtggcgac caccttgttt tctaatttgt gcattcatat atcgtttatc
     5461 taatagttgt tgaatatttt tggaattgta tatcttccca ttatgatgca tgacaattaa
     5521 gactttgtcg actaataaac ttgcgagtcc ataatcttga gtgattacga tatcatcttt
     5581 cgttgataat tgaacaattt tgtaatcaac tgcatctggt ccatcatcaa catataatgt
     5641 tgatacatgt gggggatata attggttcga aaaatggctg aagctccgaa taattgtcac
     5701 aaaaatgcct gtctcagttg ttaaatctat aatagaatca acaacaggac aagcatctcc
     5761 atcaataata atatgtgtca caattatgcc tctgtattgt tttctttatt ttgttgagag
     5821 gcgcttttgg caacataatc tttatatttt ttaaatgact tgatgcgtgc tttatcagct
     5881 tcttgttggc gtttttgttc ttctttgtgt cgtttttcaa tatttttttg taacttttta
     5941 ttcattttag cgatttcttt gcgatttttt tcagctagtt tatcgccttt tttctcagtt
     6001 ttctcatcta atttattagg tgttaagcct gcttttactt cgtatttttg tgactttttc
     6061 atatctttaa tacgttgtat ttcattcttt tcgcgggctt tttgctcttc tttatgacgc
     6121 ttttcgatat ttttttgaag tattttattc attttatcag cgtctttacg attttgttta
     6181 gctaattttt cgcctttttt ctcaatatag gcaggatcgt gttctctagc aaacttttta
     6241 agttcacgct tattttcaaa atcttgcttt ttatcgccga catattcttt aacatcactc
     6301 gctgtgttac tgattgctgc agatgttttt gaagcaactt tacttgtagc atctgtaact
     6361 ttttgtacgt ccggatgttg tttgatacgt ttacgttcaa caattaacgg taccaataca
     6421 attggtaata cattaatcat aaatttgatg acttttttct tatccataga tcttgcctcc
     6481 ataattactt tattaatttt acatacccta tgatacatca atataaacga tgagagtagt
     6541 gaatcactta taagtattta agatgttttt aaaagaagac aataaaaact gccaatcaag
     6601 cggttcctta attgacagta tatattttaa aaggaaatta aataccttta ccaatgccaa
     6661 atccgaagta aagtatagca ataaagatta ctaagacaat tctgtaaatg gcaaatggaa
     6721 ttaatttgat tttgttaatt agatgcaaga atgttttgat tgcaattagt ccaacagtaa
     6781 atgcagctaa aaagcctaaa atataaaaag gtatatcagc aatctgaata tcttgataat
     6841 gttttaataa agataaacca ctagctgcta acataattgg aacagccata ataaatgtga
     6901 agtccgatgc tgctttatga tttaatttca ttaatacacc agttgaaatt gttgagcctg
     6961 aacggctgaa accaggccac atagctactg cttgagagat accaattaca aacgcttgga
     7021 aataattgat ttgatccact gtttgtgggt ttttaacttt aactgaatac ttatcagcga
     7081 taatcatata gatagcacct acgaataagc caatcataac agttggcaca ctaaataaat
     7141 gttcttcgat gaaatcatca aatagtaagc ctaaaatacc tgctggaacc atacccacta
     7201 atacatgtaa taaatttaaa cgtcttggct ttgaacgtct ttgttgatcg ttttgtcctt
     7261 caacatgttt gtgtttacca atatgtaaaa tctctaagaa gcgttcgcgg aacacccatg
     7321 ctgctgcaaa gacggatcct aattggatga caattttaaa tgtaaatgct gattgagaac
     7381 ctaaaaattc agatgatttt aaccacatat catcaactag aatcatatgt ccagtagagg
     7441 aaacaggtgc aaattctgtt aatccttcga cgacccctaa gataatacct tttattaatt
     7501 caatgataaa cataatgtac ccactttcat tactcatttt aatttattta aatatcaaaa
     7561 ttaccatatc atgatagcat attcatttaa agacatgcta gttatagtta taatactaga
     7621 ctaaagatgt atatattcat tttcttttac atgtaaaact acaatatttt attgagctat
     7681 ttaatttgat tttaaggaaa accttttata ataggtttag gtgatataat tgtgaaaaaa
     7741 ttaacaacaa tactgtttca atataaaatt tttccggtac tcatgttctt ggtcagtact
     7801 ggtctcggca tactcgttat aacgcaaaat attttaatag cagatttttt agctaaaatt
     7861 ataagacatc aatttcaagg tttatggatt gtattattta ttttattagg tgttttactt
     7921 ttaagagcaa ctgtgcaatt tctaaatcaa tggttaggtg atacattagc atttaaagtt
     7981 aagcatatgc ttagacagcg ggttatttat aaaaataatg gtcatccaat cggtgaacaa
     8041 atgactatac tcacagaaaa cattgacggt ctagcacctt tttataagag ttatttgcct
     8101 caagtgttca aatcaatgat ggttccgctc atcataatca ttgcaatgtt tttcatccat
     8161 ttcaatactg cattaattat gttaataact gcaccattta ttcctttgtt ttatattatt
     8221 ttcggtttga aaacgcgaga tgagtcaaaa gatcaaatga cttatttgaa tcaatttagt
     8281 caacggtttt taaatattgc taaaggttta gtgacgttaa agctatttaa tcgtacagag
     8341 caaacagaga agcatattta cgacgatagt actcagttta gaactttaac aatgcgcatt
     8401 ttacgcagtg cttttttatc gggattaatg ctcgaattta taagtatgtt aggtattgga
     8461 ttggttgcat tggaagcaac gctaagctta gtagtatttc ataatattga ttttaaaact
     8521 gcggcaattg cgattatttt agcgcctgaa ttttataatg caattaagga cttaggacaa
     8581 gcgttccata ctggaaaaca aagtgaaggt gccagtgacg ttgtgtttga gtttttagaa
     8641 caaccgaaca ataataatga atttctatta aagtatgagg aaaatcaaaa gccatttatt
     8701 cagttaacag acatatcatt tcgatatgat gattctgata gattggtatt aagtgattta
     8761 aatttggaaa tatttaaagg tgatcaaatt gcacttgtag gtccaagcgg ggcaggtaaa
     8821 tccactttga cacatcttat tgcaggtgtt tatcatccaa caataggtac tataagtaca
     8881 aaccagcgtg atttaaatat aggaatactt agtcaacagc catatatttt cagtgcttct
     8941 ataaaagaga atattacgat gtttaaagat atagaaaata atattgttga agaagtgcta
     9001 gacgaagtag gtttattaga caaagttcaa tctttcacaa aaggcattaa tacaataata
     9061 ggtgaaggag gcgaaatgtt atctggtgga cagatgagac gcatagaact ttgccgtctt
     9121 ttagttatga agccagatct cgttatattt gatgagcctg caactggttt agatattcaa
     9181 acagaacaca tgattcagaa cgttctgttt caacatttta aagacacaac gatgattgtc
     9241 attgcacata gagataatac aattcgccat ttacaacgac gtttgtatat agaaaatgga
     9301 agactgattg ctgatgatcg caatatttca gtaaatataa cagaaaatgg tgatgactta
     9361 tgaaaacacg actaaaattt caagtagata aggatttatt gttagctata gttgttggtg
     9421 tttgtggaag tttagttgcg ctcgccatgt ttttcttaag tggttatatg gtgacacaaa
     9481 gtgcacttgg tgcgccacta tacgctctga tgattttagt cgttacagta aaattgtttg
     9541 ggtttttaag agctattact cgatacgtag agcgccttat ttctcataaa gctacattta
     9601 caatgctacg tgatattcgg gtacagtttt tcggtaaatt agtaaatgtc attcctaatg
     9661 tttaccgtaa actgagttct agtgatttaa tttcacgtat gattagtcgt gttgaggcgt
     9721 tacaaaatat ttatttacgt gtttattatc caccagtcgt catcggtttg acagcgttag
     9781 ttacagtaat agtattggcg ttcatttcaa tcggccatgc gctattgatt atggttagca
     9841 tgttgtttac tttactcatc gttccttggt taagctcaaa aaaagcacgt actttaaaga
     9901 aacatgcagc taatgaacag gctcgatttt taaatcattt ttatgattat aaagctggta
     9961 tggatgaact acgtcgattt aatcaaatta atcattatcg agataatttg atggataaat
    10021 taaatcattt tgataaatta caacttaaag agcaacgctt tttaacgatt tatgatttta
    10081 tattaaatat tattgctatg ctttcgattt ttggtagttt agttctggga ttaattcaaa
    10141 ttaatgaagg ccaactcaat attatttata tgacgagtat agttttaatg atcttaactt
    10201 tatttgaaca agctgtacca atgacaaatg tcgcgtatta taaagcggat actgaccaag
    10261 cattgcacga tattaatgaa gtgatatctg taccttctac taatggaaaa aaccgcctta
    10321 atgataagta tgatgcaacg aacatttatg aagttaagga cgctagtttt aagtattgga
    10381 accagcaaac gtatgtgtta tcggatatta attttaatgt taatagaggc gaaaagattg
    10441 cgattgtggg tccttctggt tcaggaaaaa gtacattact acaaattatg gcagggttat
    10501 atcaattaga tagtggctct attcgtttcg aaaatatgga tatgtttaaa atagatgaca
    10561 aagataagtt tgaatcgctg aatgtcttgc tacaatctca acaattattt gatggtacaa
    10621 tacgtcaaaa tttatttacc gatgaaaaag atgaagcggt gcaagcaata tttaagcaat
    10681 tagatttaga acatttggca ctagaacgtc aaattgactt agatggtcat acattatctg
    10741 gcggagaaat tcagcgttta gcgattgcga ggatgttatt aaaagatact gcatcaacat
    10801 ggattttaga tgaaccaaca acggcattag ataaacaaaa tagtttaaaa gttatggatt
    10861 taattgaagc acatgcagaa acattaattg ttgctacaca cgatttaact ttattgtcac
    10921 gttttgagac catcattgtg atgataaatg gtaaaatagt tgaaaaggga aactatcaac
    10981 aattactcgc taatcaaggt gctttatgga atatggttca atataatgca taaaaaaact
    11041 gcttgatagg ctaagaaacc tttcaagcag ttttttaact aacaagctta cgcgtgctaa
    11101 ttgtttttct attcttaata aattctaaac attactttaa ttgtcatgac aaaagttaat
    11161 tatttttcct ttgtttcatc aaatgcatga atgactttac ctaataagcg attaagttct
    11221 ttaacttcat cttgagataa agaagaagct gaagcgactt tgtcagatgc attacttaat
    11281 tctggtctaa tagtttcact tttgtcagtc aagtgaataa atacttcacg ttgatcgact
    11341 tcggaacgtt cacgcttaat taagtctact tgttccattc gttttaataa tggtgatact
    11401 gtaccagtat cgagtgctaa ttcagttacg actttcttga cgtttacagg agattcatcc
    11461 cataaaatag ttaagacaag aaattgtggg tatgttagat tgtacttctt aaaaactttg
    11521 ttagagtagt agcgattaac ttgtctttga gcattgtaca aactaaagca tagctgttct
    11581 tttaaattat gttgatcaga cattaaagtt ctcctccaga catactatcc gtttttttct
    11641 cttttcggat tggtaatcat taaaaagttg attgtttatt aattcacaac tttctttgat
    11701 tcaatgccat gctaaaatta aagtatgttt aaagtttaga agatattttt aattaaat
//
LOCUS       DALMNS010000092        11549 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.092, whole genome shotgun sequence.
ACCESSION   DALMNS010000092 DALMNS010000000
VERSION     DALMNS010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11549
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.092"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            54..980
                     /locus_tag="O6Y56_002096"
     CDS             54..980
                     /locus_tag="O6Y56_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5575343.1"
                     /translation="MGKYIFKRFIYMLISLFIIITITFFLMKLMPGSPFNDAKLNAEQ
                     KEILNEKYGLNDPVATQYLHYLKNVVTGDFGNSFQYHNQPVWDLIKPRLLPSFEMGLT
                     AMFIGVILGLILGVAAATKQNSWVDYTTTVISVIAVSVPSFVLAVLLQYVFAVKLRWF
                     PVAGWEGFSTAVLPSLALSAAVLATVARYIRAEMIEVLSSDYILLARAKGNSTMRVLF
                     GHALRNALIPIITIIVPMLASILTGTLTIENIFGVPGLGDQFVRSITTNDFSVIMAIT
                     LLFSTLFIVSIFIVDILYGVIDPRIRVQGGKK"
     gene            980..2050
                     /locus_tag="O6Y56_002097"
     CDS             980..2050
                     /locus_tag="O6Y56_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5575344.1"
                     /translation="MAENKNNLSINDDHSNAAMTHTSDAIASSDFIIRELDLNQEPEM
                     QRESKNFWQDAWAQLKRNKLAVVGMIGLIIIVIFAFIGPVINKHDYAEQNVQHRNLPA
                     KIPVLDKVPFLPFDGKDADGKDAYKAANAKENYWFGTDQLGRDLWTRTWKGAQISLFI
                     GVVAAMLDIFIGVVYGAISGFFGGRVDTIMQRILEVIASIPNLIVVILFVLIFEPSIW
                     TIILAMSITGWLGMSRVVRGEFLKLKNQEFVMASKTLGASKFKLIFKHILPNTLGAIV
                     VTSMFTVPSAIFFEAFLSFIGIGVPAPQTSLGSLVNDGRAMLLIYPHELFIPAMILSL
                     LILFFYLFSDGLRDAFDPKMRK"
     gene            2066..3148
                     /locus_tag="O6Y56_002098"
     CDS             2066..3148
                     /locus_tag="O6Y56_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5575345.1"
                     /translation="MTERILEVNDLHVSFDITAGEVQAVRGVDFYLNKGETLAIVGES
                     GSGKSVTTKAITKLFQGDTGRIKKGEILFLGEDLAKKPENELIKLRGKDISMIFQDPM
                     TSLNPTMQIGKQVMEPLIKHKNYSKAQAKKRALEILNLVGLPNAEKRFKAYPHQFSGG
                     QRQRIVIATALACEPKVLIADEPTTALDVTMQAQILDLMKELQQKIDTAIIFITHDLG
                     VVANIADRVAVMYGGQMVETGDVNEIFYDPKHPYTWGLLSSMPDLSTTNDTPLLAIPG
                     APPDLLHPPKGDAFARRSQYALDIDFKVEPPWFKVSPTHFVKSWLLDARAPKVELPEL
                     VKQRMKPMPNNYEKPLKVERVSFNEK"
     gene            3138..4079
                     /locus_tag="O6Y56_002099"
     CDS             3138..4079
                     /locus_tag="O6Y56_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5575346.1"
                     /translation="MKNDEVLLSIKNLKQYFNAGKKNEVRAIENISFEIYKGETLGLV
                     GESGCGKSTTGKSIIKLNDITSGEILYEGIDIQKIRKRKDLLKFNKKIQMIFQDPYAS
                     LNPRLKVMDIVAEGIDIHHLATDKRDRKKRVYDLLETVGLSKEHANRYPHEFSGGQRQ
                     RIGIARALAVEPEFIIADEPISALDVSIQAQVVNLLLKLQREKGITFLFIAHDLSMVK
                     YISDRIAVMHFGKIVEIGPADDIYQYPLHDYTKSLLSAIPQPDPESERSRKRFSYIDD
                     EANNHLRQLHEIRPKHFVFSTEDEAARLRKNLLVTQD"
     gene            4098..5753
                     /locus_tag="O6Y56_002100"
     CDS             4098..5753
                     /locus_tag="O6Y56_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HDB5575347.1"
                     /translation="MTRKLKALILILVATIALSGCANDDGIYSDKGQVFRKILSADLT
                     SLDTSLITDEISSEVTAQTFEGLYTLGKGDKPVLGVAKAFPEKSKDGKTLKVKLRNDA
                     KWSNGDKVTAQDFVYAWRKTVDPKTGSEFAYIMGDIKNASDISTGKKPVEQLGIKALD
                     DKTLQIELEKPVPYINQLLALNTFAPQNEKVAKKYGKNYGTAADRAVYNGPFKVDDWK
                     QEDKTLLSKNQYYWDKKNVKLDKVNYKVIKDLQAGASLYDTESVDDAVITADQVNKYK
                     DNKGLNFVLTTGTFFVKMNEKQYPDFKNKNLRLAIAQAIDKKGYVDSVKNNGSIPSDT
                     LTAKGIAKAPNGKDYASTMNSPLKYNPKEAREHWDKAKKELGKNELTFSMNTEDTPDA
                     KISAEYIKSQVEKNLPGVTLKIKQLPFKQRVSLELSNNFEASLSGWSADYPDPMAYLE
                     TMTTGSAQNNTDWGNKEYDQLLKVARTKLALQTNERYENLKKAEEMFLGDAPVAPIYQ
                     KGVAHLTNPQVKGLIYHKFGPNNSLKHVYIDKSIDKVTGKKKK"
     gene            5966..7681
                     /locus_tag="O6Y56_002101"
     CDS             5966..7681
                     /locus_tag="O6Y56_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HDB5575348.1"
                     /translation="MGKLIKYISILIVIVLVLSACGKSSNKNEGVKDATKTEISKHKG
                     GTLNVALTAPPSGVYSSLLNSTHADAVVEGYFNESLLAIDKKIRPKAYIASWKDIEPA
                     KKIEFKIKKGIKWHDGNELKIDDWIYSIEVLANKDYEGAYYPSVENIQGAKDYHEGKT
                     DHISGLKKIDDYTMQVTFDKKQENYLTGFITGPLLSKKYLSDVPIKDLAKSDKIRKYP
                     IGIGPYKVKKIVPGEAVQLVKFDDYWQGKPALDKINLKVIDQAQIIKAMEKGDIDVAN
                     DATGAMAKDAKSSNAGLKVLSAPSLDYGLIGFVSHDYDKKANKTGKVRPKYEDKELRK
                     AMLYAIDREKWIKAFFNGYASEINSFVPSMHWIAADPKELNDYKYDPEKAKKILDKLG
                     YKDRDGDGFREDPKGNKFEINFKHYSGSNPTFEPRTAAIKDFWEKVGLKTNVKLVEFG
                     KYNDDLANASKDMEVYFRSWAGGTDPDPSDLYHTDRPQNEMRTVLPKSDQYLDDALDF
                     EKVGIDEKKRKDIYVKWQKYMNDELPGLPMFQGKSITIVNDKVRNLDIEIGTDQSLYN
                     LTKEA"
     gene            7732..8718
                     /locus_tag="O6Y56_002102"
     CDS             7732..8718
                     /locus_tag="O6Y56_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5575349.1"
                     /translation="MNNVLLEVKDLETSLKIDNEWLATVENISFELSKGEVLGIVGES
                     GCGKSILSKSIIKLLPEKISKLSNGEVIFDGKRIDTLNEKQLLDIRGNDIAMIFQEPM
                     TALNPVFTIKNQLVESIKSHKKISKKEANNLAKDLLKKVGIARQDEILNSYPHQLSGG
                     MRQRVMIAMAISCSPKLLIADEPTTALDVTIQAQILDLLKELQKETQMAIMMITHDLS
                     VVAEFCDKVLVMYAGQIVEFGGIKEILHNPKHPYTQKLLSTIPKLKEEQKRLETIEGI
                     VPSIQAFHVNKCRFANRCNKKLDICNNQSPKMHVCEDVIVRCHLYQNEYKEI"
     gene            8721..9701
                     /locus_tag="O6Y56_002103"
     CDS             8721..9701
                     /locus_tag="O6Y56_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HDB5575350.1"
                     /translation="MENILEVNHIKKYYKIKTGLLQKTQYVKAVDDVSFSIKKGQTFG
                     LVGESGCGKSTLGKVIIRLEDATSGSIIVNGEDITRLQGKKLRKSRQQYQMIFQDPYA
                     SLNPMQMVGDIISEPILNYKKLPKEEIKKEVLYLLKCVGLSEDAYYKYAHEFSGGQRQ
                     RVGIARALALRPSLIVADEPVSALDVSVQSQVLNLLKDLQEQFNLSYLFIAHDLSVVK
                     HISDVIGVMYLGHIVEIASDKEIYENPKHPYTKALISSIPQIDKLNKNRIILKGELPS
                     PSNPPQGCPFHTRCPIAQDMCKKSMPELKDIGNEHQVACFYVDKVGDLND"
     gene            9694..10656
                     /locus_tag="O6Y56_002104"
     CDS             9694..10656
                     /locus_tag="O6Y56_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5575351.1"
                     /translation="MIKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGKIK
                     QEAINAQREKLGLNDSIPHQYIRWVNHVIHGDLGESIKYKRPVIDVIEERIPNTILLG
                     AMSLIITYIISFALGITSGRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQ
                     WFPFQGSVDINLKEGTFEYYMSKIYHTFLPALTLGLLSTAGYIQYLRNDIIENSKKDY
                     VLTARSKGLSMNKIYNKHILRNSLIPIITFLGADIVSILGGAVITETIFSYNGIGKLF
                     LESVIGQDYPLMMALTLFFSFLGLLGNLISDITYGFIDPRIRSN"
     gene            10668..11549
                     /locus_tag="O6Y56_002105"
     CDS             10668..11549
                     /locus_tag="O6Y56_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5575352.1"
                     /translation="MQNKSKSPFKIALSKFIHNKIAMLSIIFLLIITIVSIIAPLIAP
                     FPVNQQDLLNIKGEMTAQNILGTDSGGRDNFSRLLYAGRISLSIGITSTIGMLLIGIT
                     VGVISGYFGGIVDTLLMRITEFVMLFPFLIFAIVLNAALGDKIKNPYGSAIILVLVII
                     VLSWGGIARLVRGKVLQEKENEYFLAAKSIGTPTYKIILKHLLPNILSVVIVQATLLF
                     AGMIVVESGLSFLGFGISKAIPSWGNMLSDAQEGDVISGKPWIWMPPAIMITLTILSI
                     NFVGEGLKDAFNPRGRR"
BASE COUNT         4233 a         1551 c         2170 g         3595 t
ORIGIN      
        1 ttttgaaggg aatggaaatt tagaaatcgg aatttgttag aggaggggat tagatgggga
       61 aatatatttt caaacgattt atttatatgc ttatttcttt atttattatt attacaatta
      121 catttttctt aatgaaatta atgccaggtt cgccatttaa cgatgctaaa ttaaatgctg
      181 aacaaaaaga aattttaaat gaaaaatatg gattaaatga tcctgtagct acgcagtatt
      241 tacattattt aaaaaatgtt gttacaggcg attttggtaa ttcattccag tatcataatc
      301 aacctgtgtg ggatttgatt aaaccgagac tactaccttc ttttgaaatg ggtcttacag
      361 caatgttcat cggtgtgata ctgggactta ttttaggtgt tgcagcagct actaaacaaa
      421 attcttgggt tgactataca actacagtta tttcagttat tgcagtatct gtaccatctt
      481 ttgtacttgc tgtactttta caatatgtat ttgcagttaa attaagatgg ttcccagtag
      541 ctggatggga aggtttttcg accgcggtat taccgtcact tgcattatct gcagctgttt
      601 tagcaactgt cgccagatac ataagagcag agatgataga ggtattaagt tcagactaca
      661 ttttattagc gagagctaaa ggtaattcga caatgcgtgt actttttgga catgcactta
      721 gaaatgcttt aattccaatt attacaatta tcgttcccat gttagcaagt attttaacag
      781 gcactttaac aattgaaaat atttttgggg ttcctggatt aggggatcaa ttcgtacgtt
      841 caattacaac aaatgatttc tcagtaatca tggcaatcac actattattt agcacattgt
      901 ttatcgtttc tatttttatt gtagatattt tgtacggtgt gatagatcca cgaattcgtg
      961 ttcagggagg taaaaaataa tggctgaaaa taaaaacaat ttgtcgatta acgacgatca
     1021 ttctaatgca gctatgacgc atacctctga cgctatcgca tcatctgatt ttattattag
     1081 agaattagat ttgaatcagg aacctgaaat gcaacgagaa agcaaaaact tttggcaaga
     1141 tgcttgggct cagttaaaac gaaataagtt agctgttgtc ggtatgatag gtttaattat
     1201 cattgtaata tttgctttta tcggtccagt tataaataaa catgattatg ctgaacaaaa
     1261 tgtacaacat agaaatcttc cggcaaaaat acctgtatta gacaaagttc catttttacc
     1321 ttttgatggt aaagatgcag atggcaagga tgcttataaa gcagcaaatg ctaaagaaaa
     1381 ttattggttt ggtactgatc agttgggtcg agatttatgg acaagaacat ggaaaggtgc
     1441 tcaaatttca ttgtttatcg gtgttgttgc agcgatgtta gatattttta ttggcgttgt
     1501 atatggtgcg atttctggat tcttcggtgg acgtgtcgat acgattatgc aacgtatact
     1561 tgaagtcata gcatctattc cgaatttaat tgtcgtaatt ttatttgtat taatttttga
     1621 accatccatt tggacaatta tattggctat gtctatcaca ggctggttag gcatgagcag
     1681 agttgtacgt ggagaatttt taaaattgaa aaatcaagag tttgtcatgg cttcgaaaac
     1741 attgggggct tcaaaattca aattgatatt taagcatatt ttacctaata cgttaggtgc
     1801 tatcgtggtt acatcaatgt ttacagtacc tagtgctatt ttcttcgaag catttttaag
     1861 tttcattggt ataggtgtac ccgcacctca aacatcgtta gggtcattag taaatgatgg
     1921 gcgcgcaatg ttattaattt atccacatga attatttata ccagcaatga ttttaagttt
     1981 attaattcta ttcttttact tatttagtga tggattacgt gatgcatttg atccgaaaat
     2041 gcgtaaataa aagggggcat agcatatgac tgaaagaata ttagaagtaa atgatttgca
     2101 tgtttccttt gatattacag caggggaagt gcaggcagtg agaggtgtag atttttattt
     2161 aaacaaaggg gaaacattgg caattgttgg tgaatcaggt tcaggtaaat ctgtaacaac
     2221 aaaagcaatt acaaaattat tccaagggga cacaggaaga attaaaaagg gagaaatttt
     2281 atttttaggg gaagatttag caaaaaaacc tgaaaatgag ttaattaaat tacgtggcaa
     2341 agatatttca atgatctttc aagatccaat gacatcttta aacccaacga tgcaaattgg
     2401 taaacaagtc atggaaccat taattaagca caaaaattat agtaaagcac aagctaaaaa
     2461 gcgcgcattg gaaatactaa atcttgtagg tttaccaaat gcagaaaaaa gatttaaagc
     2521 atatccacat caattttcag gtggacaaag gcaaagaatt gttattgcaa ccgcattagc
     2581 ttgtgaacct aaagtgctca ttgctgatga accaacgact gcattagacg taacgatgca
     2641 ggcacaaatt ttagatttaa tgaaagaact acaacaaaaa atcgatacag caattatttt
     2701 tataacgcat gatttagggg ttgttgcgaa tattgctgat agagtggcag ttatgtatgg
     2761 tggtcaaatg gttgaaacag gagatgttaa cgaaatattt tatgatccaa agcatccata
     2821 tacatgggga ttattatcgt caatgcctga tttatcaaca acaaatgaca caccattact
     2881 agcgattcct ggagcgccac ctgatttatt acacccacct aaaggtgatg catttgctag
     2941 acgtagtcaa tatgcattag atattgattt taaagtagaa ccaccgtggt ttaaagtttc
     3001 accgacacat tttgtgaaat cttggttatt agacgcacgt gcaccaaaag ttgaactacc
     3061 cgagctggta aaacaacgta tgaaaccgat gcctaataat tatgaaaaac cactcaaggt
     3121 agaaagggtg tcgttcaatg aaaaatgatg aagtgctatt atctattaaa aatttaaagc
     3181 aatattttaa cgcaggaaag aaaaacgaag tgagagcgat tgaaaatatt tcgtttgaaa
     3241 tatacaaagg ggaaacatta ggtttagtag gagaatcggg gtgcggtaaa tctacaactg
     3301 gtaaatcaat tatcaaactt aatgatatta caagtggaga aattttgtat gagggtattg
     3361 atatacaaaa gattcgtaaa cgtaaagatt tgcttaaatt taataaaaag atacagatga
     3421 tttttcaaga cccatatgcg tctttaaatc ctaggttaaa agtaatggat atagtagctg
     3481 aaggcattga tatccatcat ttagcaactg ataaacgtga ccgtaaaaaa cgtgtctatg
     3541 atttacttga aactgttgga ttaagtaaag aacatgccaa tcgttatcct catgaatttt
     3601 caggtggaca acgccaacgt attggaattg cccgtgcatt agccgttgaa ccagaattta
     3661 ttatagcaga tgaacctatt tcagcattgg atgtttcaat tcaagctcaa gtagtcaatt
     3721 tgttattaaa attacagcgt gaaaaaggta ttacattcct atttattgca catgatttat
     3781 caatggtgaa gtatatctct gatcgaattg cagtcatgca ttttgggaaa attgtagaaa
     3841 tcggaccagc agacgatatt tatcaatatc cattacatga ttatactaag tctttattgt
     3901 cggcaattcc tcaaccggat cctgaatcgg aacgtagtcg caaacgattt agttatattg
     3961 atgatgaagc aaataatcat ttaagacaat tacatgaaat aagaccaaag cattttgttt
     4021 ttagtactga agatgaagcg gcacgactac gaaaaaattt gttggtgaca caagattaag
     4081 gggaaggagg aaatgaaatg acaagaaagt tgaaagcgct gattttaata ttggttgcca
     4141 caattgcatt aagtggttgt gctaatgatg atggtattta ttcagataaa ggtcaagtat
     4201 tcagaaaaat tttgtcagca gacttaacat cccttgatac atcattaata acggatgaaa
     4261 tatcttctga agtgactgcg caaacattcg aaggtttata tacattagga aaaggtgaca
     4321 aaccggtgtt aggtgttgcg aaagcttttc ctgaaaagag taaagatggt aaaactttaa
     4381 aggttaaatt aagaaacgat gctaaatgga gcaatggtga caaagtgact gcacaagact
     4441 ttgtttatgc ttggagaaaa acagttgacc ctaaaacagg ttctgaattt gcatacatta
     4501 tgggggacat taaaaatgcg agtgatatta gtactggtaa gaaacctgta gagcaattag
     4561 gtatcaaagc attagatgat aaaacattac aaattgaatt agaaaagccg gttccatata
     4621 ttaatcaatt attagcacta aatacatttg cacctcaaaa tgaaaaagtt gccaaaaaat
     4681 atggtaaaaa ttacggtacg gcagctgata gagcggtata caatggtcca tttaaagttg
     4741 atgattggaa acaagaagat aaaaccttac tatctaaaaa tcagtattat tgggataaaa
     4801 agaatgtaaa attagataaa gtgaattata aagttattaa agacttacaa gcaggtgcat
     4861 cattgtatga tactgaatca gtagatgacg cagttattac agcagatcaa gtaaataaat
     4921 ataaagataa taaaggatta aactttgtgt taacgactgg gacatttttt gtgaaaatga
     4981 atgaaaaaca atatcctgat tttaaaaaca aaaatttaag attggctatc gcgcaagcaa
     5041 tagataaaaa aggatacgta gattcagtga aaaacaatgg ctcaattcct tccgatacat
     5101 taacagccaa aggcattgcg aaagcgccta atggcaaaga ttatgcgagt accatgaatt
     5161 cgcctttaaa atataatcct aaagaagcaa gagaacactg ggacaaagct aaaaaagagt
     5221 taggtaaaaa tgaattgaca ttttcaatga acacagaaga tacaccagat gcaaaaatat
     5281 ctgctgaata tatcaaatcg caagttgaga aaaatttacc aggagttact ttgaaaatta
     5341 agcaattgcc gttcaaacaa agagtatcat tagaactgag taacaatttt gaagcatcac
     5401 ttagtggttg gtctgcagat taccctgatc ctatggctta cttagaaaca atgaccacag
     5461 gtagcgcaca aaataataca gactggggta ataaagaata cgatcaatta cttaaagtag
     5521 caagaaccaa attggcactt caaacgaacg aacgatatga aaacttgaaa aaagcagaag
     5581 aaatgttcct aggagatgca ccggtagcac caatttatca aaaaggtgtt gcacatttaa
     5641 caaatcctca agtaaaagga ttgatttacc ataaatttgg tccaaataac tcacttaaac
     5701 atgtatatat tgataaatcg atagataaag taacaggtaa gaagaaaaaa taatatgctt
     5761 tgtaaattag gctggagata tatctccagt ctttttgtgt tgcagaaaaa ctttgggaat
     5821 aaaaaattaa aataagtcgt tttttaaatt actgaaattg attaaatgca ttaataactg
     5881 aatattctaa aaataaactt gtaataattt tttctatgag taaactaaaa agaaaaaaat
     5941 tagattgaaa gtaggaggca tataaatggg gaagctaatt aaatatattt caatacttat
     6001 tgttatcgtt ttagtgttga gtgcttgcgg aaaaagcagt aataaaaatg aaggagtaaa
     6061 agatgctact aaaacagaaa tctcaaaaca taaaggcggt accttaaatg tagcattaac
     6121 agcaccgcca agtggcgttt attcttcgtt attaaatagt acacatgcag atgctgtagt
     6181 tgaaggatat tttaacgaaa gcttattagc aattgataaa aaaatacgtc ctaaggcata
     6241 tattgcttca tggaaggaca tcgagccggc taagaaaata gaatttaaaa ttaaaaaagg
     6301 tattaaatgg catgatggta atgaattgaa aattgatgat tggatttatt caattgaagt
     6361 cttagctaac aaggattacg aaggtgctta ttatccaagt gtagaaaata tccaaggtgc
     6421 gaaagattat catgaaggaa aaactgatca tattagcgga ttgaagaaaa tagatgacta
     6481 cactatgcag gttacatttg ataaaaaaca agaaaattac ttaacaggat ttattactgg
     6541 acctttatta agtaaaaaat atttatcaga tgtaccaatt aaagatttag cgaaatcaga
     6601 taaaatccga aaatacccta ttggtattgg accgtataaa gttaagaaaa ttgttccagg
     6661 tgaggctgtt caactcgtta aatttgatga ttattggcaa ggtaagcctg cactagacaa
     6721 aatcaattta aaagttattg atcaagctca aattattaag gcaatggaaa aaggcgatat
     6781 tgatgttgcg aatgatgcta ccggtgcaat ggcaaaagat gctaagtcat ctaatgctgg
     6841 tctcaaggta ttatctgcgc caagcttaga ctacggttta ataggattcg tatctcatga
     6901 ttacgataaa aaagctaata aaactggtaa agtgagacca aaatatgaag acaaagaatt
     6961 acgtaaagca atgctttatg caattgatag agaaaaatgg atcaaagcat ttttcaatgg
     7021 ttacgctagt gaaataaata gttttgtacc atcaatgcat tggatagcag ctgatcctaa
     7081 ggaactaaac gattataaat atgatcctga aaaagctaaa aaaatcttag ataagttagg
     7141 ttataaagat agagatggtg acggatttag agaagatcct aaaggtaata aatttgagat
     7201 taactttaaa cattattcag gttcaaatcc tacttttgaa ccaagaactg ctgcgataaa
     7261 agatttctgg gaaaaagttg gcttgaaaac aaatgtgaag ttagtagaat tcggtaaata
     7321 taatgatgac ttagcaaatg catctaaaga tatggaagtg tacttcagat catgggcagg
     7381 aggtacagat ccagatccat cagatttata ccatactgat agacctcaaa atgaaatgag
     7441 aacagtttta ccaaaatcag atcaatattt agatgatgca ttagacttcg aaaaagtagg
     7501 cattgatgaa aagaaacgta aagatattta tgtaaaatgg caaaaatata tgaatgatga
     7561 gttacctgga ttaccaatgt tccaaggtaa atcgataact attgttaacg ataaagtacg
     7621 aaacttagac attgaaattg gaactgatca aagtttatat aatttaacta aagaagctta
     7681 gtaatgtaac ctcgacgatt ttgtcgaggt ttacttatat ggggggatgt tatgaataat
     7741 gtattgttag aggttaaaga tttagaaaca tcattaaaaa tagataatga atggttagca
     7801 actgttgaaa atatttcttt tgaattatct aaaggagaag ttttgggtat agtaggggaa
     7861 tctggttgcg gtaagtccat attaagtaag tcaattatta aattattacc agaaaagata
     7921 tctaaactaa gtaatggaga agttatattt gatggtaaac gaatcgatac gctcaatgag
     7981 aagcaattgc tagatattcg aggaaatgat attgctatga tttttcaaga acctatgact
     8041 gctttaaatc cggtatttac cataaaaaat caactagtgg aatctataaa atcacataaa
     8101 aaaatttcta aaaaagaagc aaataactta gcaaaagatt tactaaaaaa agttggaatt
     8161 gcaagacaag atgaaatatt aaatagctat cctcatcaat tatctggtgg tatgaggcaa
     8221 agagtaatga ttgcaatggc catttcatgt tctcccaaat tattaattgc tgatgaacct
     8281 acaactgctt tggatgtcac gattcaagct caaatattag acttattaaa agaattgcaa
     8341 aaggaaacgc aaatggcaat tatgatgatt acacatgatt tgagtgtggt tgctgaattt
     8401 tgcgataaag ttttggttat gtatgcaggt caaattgtag aatttggagg cataaaagaa
     8461 atactacaca atccgaaaca tccttatacc caaaaattat tatctacaat tccaaaactt
     8521 aaagaagagc agaaacgact tgaaacgata gaaggaattg tgccatcaat tcaagcattt
     8581 cacgtaaata agtgcagatt tgcaaataga tgtaacaaaa aactggatat ttgtaataat
     8641 caatctccta aaatgcatgt ttgtgaagac gtcattgtac gttgtcattt gtaccaaaat
     8701 gaatataagg agatataaga atggaaaata ttttagaagt aaatcacata aaaaaatact
     8761 acaaaattaa aactggatta ttacaaaaaa ctcagtacgt taaagctgtt gatgacgtat
     8821 cgttttcaat aaaaaaagga caaacttttg gattagtagg agaatcgggt tgtggtaagt
     8881 caacgttagg taaagtgatt atcaggcttg aagatgcaac ttcaggctca ataattgtta
     8941 atggtgaaga tataacaagg ttacaaggta aaaaactgag aaaatcacga caacaatatc
     9001 agatgatatt tcaagatccg tatgcatcat tgaatccgat gcaaatggtt ggagatatca
     9061 tttcagaacc tattttaaat tataaaaaat tgccaaaaga agaaataaaa aaagaagtac
     9121 tatatttatt aaaatgtgtt ggcctaagtg aagatgcata ttataaatat gcacatgaat
     9181 tttcaggtgg acagagacaa agagtgggaa ttgcaagagc attggctttg cgtccgagtt
     9241 taattgttgc tgatgagcct gtaagtgcat tagatgtatc tgttcaatct caagtactga
     9301 atttattaaa agatttacaa gaacaattta acttaagcta tttatttatt gcacatgatt
     9361 taagtgtagt aaaacatata agtgatgtca ttggagttat gtatttaggt catatagttg
     9421 aaatcgcatc tgataaagaa atttatgaaa atcccaaaca tccatataca aaagcgttga
     9481 tttcatcaat accacaaatt gataagctaa ataaaaatag aattatatta aagggagaat
     9541 taccttcgcc aagtaatccg ccacaaggtt gtcctttcca tactagatgt ccaattgctc
     9601 aagatatgtg caaaaaaagt atgccagaat taaaggacat tggtaacgaa catcaagttg
     9661 cttgtttcta cgtagataaa gtaggtgatt taaatgatta aattaatact taaaagatta
     9721 gggttaatga tcccgttact aattttaatc tcaatagttg tattttcatt agcaatcata
     9781 caaccaggag atccattttc agatctacaa aacggtaaaa taaaacaaga agcaataaat
     9841 gcacaaagag aaaagttagg tctcaacgac tcaataccac atcaatacat tagatgggtc
     9901 aatcatgtta tacacggtga tttaggggag tcaatcaaat ataaaaggcc ggtaattgat
     9961 gttattgagg aaagaattcc aaatacaata ttactcggtg ctatgtcatt aattattact
    10021 tatattatct catttgcttt aggaataacg tcaggtagat attcttacag tttgacggat
    10081 tatactgtgc aaatatttaa ttatttgatg ttagccattc catcttttat tgcgggagta
    10141 tttgcaattt ttattttttc ttttgaatta caatggtttc cgtttcaagg ttctgttgat
    10201 attaacctta aagaaggtac ttttgaatat tatatgagta aaatttatca tacatttttg
    10261 cctgcattaa ctttaggatt attatctact gctggttata ttcaatattt acgtaatgat
    10321 attattgaaa attctaaaaa agattatgta ttgacggcaa ggtcaaaagg attatctatg
    10381 aataaaattt ataataaaca tatattgaga aattctctaa tacctattat tacattttta
    10441 ggtgctgata ttgtaagtat tttaggtgga gctgtgatta cggagactat cttttcatat
    10501 aacggtattg gtaaattatt tttagaatcg gtaataggcc aagactatcc attaatgatg
    10561 gcattaacgt tatttttctc atttttaggt ttactgggta atttgatttc tgatattact
    10621 tatggattta tagatccaag aattagaagt aactaggggg gattagaatg caaaataagt
    10681 caaaatcgcc ttttaaaatt gcattgtcta aatttattca taataaaatt gcaatgttat
    10741 cgattatttt tttattaatc ataactattg tatcaattat agcgccatta atagctcctt
    10801 ttccagtgaa ccaacaagat ttattaaata taaaaggtga aatgacagca caaaacattc
    10861 ttggtacaga ctctggtggt agggataact ttagtcgttt gttatatgca ggtcgtattt
    10921 cattatccat tggaattaca tctacaatag gaatgctttt gattggaatt acagttggag
    10981 tgatttctgg ttattttgga ggtattgttg atacattatt aatgagaata accgaatttg
    11041 ttatgttatt tccgttttta atatttgcaa ttgtattaaa tgccgcactt ggagataaaa
    11101 ttaaaaatcc ttatggatct gccataattc ttgttctagt tattatcgta ttaagttggg
    11161 gaggtattgc aagactcgtt cgtggtaaag tacttcaaga aaaagaaaat gaatactttt
    11221 tggcagcaaa atcaattggt acacccacat ataaaattat tttgaaacat cttttgccga
    11281 atatattaag tgtagttatc gtacaagcaa cattgttatt tgccggtatg attgtagtgg
    11341 aatcaggatt gagtttttta ggattcggaa ttagtaaagc aatcccatct tggggtaata
    11401 tgttgagtga tgctcaagaa ggtgatgtta taagtggtaa accgtggata tggatgccac
    11461 ctgctataat gattacatta actatattaa gtataaactt tgtaggggaa gggcttaaag
    11521 atgcttttaa tcctagaggt agacgttaa
//
LOCUS       DALMNS010000093        11153 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.093, whole genome shotgun sequence.
ACCESSION   DALMNS010000093 DALMNS010000000
VERSION     DALMNS010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 11153)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11153)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11153
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.093"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..2193)
                     /locus_tag="O6Y56_002106"
     CDS             complement(<1..2193)
                     /locus_tag="O6Y56_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000794614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrinogen-binding adhesin SdrG C-terminal
                     domain-containing protein"
                     /protein_id="HDB5575353.1"
                     /translation="MKNNLRYGIRKHKLGAASVFLGTMIVVGMGQDKEAAASEQKTTT
                     VEENGNSATDNKVSETQTTATNVNHIEETQSYNATVTEQPSNATQVTTQEVPKAVQAP
                     LTAQPANVETVKEEVVKEEAKPQVKETTQPQDNSGDQRQVDLTPKKATQNQAAETQVE
                     VAQPRTASESKPRVTRSADVVDASDAKVETGTDVTSKVTVEDESKIEAPKGNNVQPHE
                     GQRVVLKYKLKFQDGLKTGDYFDFTLSNNVNTHGVSTTRKVPDIKNGSLVMAKGQVLD
                     NGRIRYTFIDYIKDKVNVTANLEINLFIDPKTVQSNGQQTITSKLNGKETSGTMQITY
                     KDGVKNHYTNVNGSIETFDKEKNKFTHVAYIKPINGNNSDSVTVTGMLTQGSNENGTQ
                     PNVKIYEYVGTENGLPQSVYANTVDSTQLKDVTNQMSDKLKVQNNGSYSLNFDKLDKT
                     YVIHYTGDYLNGTSEVNFRTQLTGYPENHYKTYYYYNHGYTLTWDNGLVLYSNKANGD
                     GKYGPIVDSNNFEFSEDSGNGSISGQYDEKQIIETEENQDNTPLDIDYHTAIDGEGGY
                     VDGYIETIEETDSSAIDIDYHTAVDSEAGHVGGYTESSEESNPIDFEESTHENSKHHA
                     DVVEYEEDTNPGGGQVTTESNLVEFDEESTKGIVTGAVTDHTTVEDTKEYTTESNLIE
                     LVDELPEEHGQAQGPIEEITENNHHISHSGLGTENGHGNYGVVEEIEEN"
     gene            complement(2177..2279)
                     /locus_tag="O6Y56_002107"
                     /pseudo
     CDS             complement(2177..2279)
                     /locus_tag="O6Y56_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501263.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2662..4020)
                     /locus_tag="O6Y56_002108"
     CDS             complement(2662..4020)
                     /locus_tag="O6Y56_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate permease"
                     /protein_id="HDB5575354.1"
                     /translation="MFNEIWPLISVVLGIVILLVLIIGFKLNTFISLIITSMITALML
                     GIPLTKIMETIEKGMGSTLGHIALIFGLGAILGKLLADGGGATRIADTLIQKFGQKHV
                     QWAMLVAAFIVGIALFFEVGLVLLIPLVFTVAKRANVSVLKLGLPMVTALSVTHGFLP
                     PHPGPVVIAKELKANVGDVLLYGMIIAIPVTLIAGPIFNKIAQKMIPSAYTREGDISA
                     LGAQKEFKDQEMPGFGMSLLTATLPVILMLVSTITQLVTGHDKPTNLFESIIYMIGTA
                     GTAMLIAVLFAIVTMGLMRKRKMNHIMESVTNAIYPIGMMLLIIGGGGTFKQVLIDGG
                     VGNTIAKMFEGTEMSPILLAWIVAAVLRIALGSATVAAISTTGIVLPLLQSSDVNVAL
                     VVLAIGAGSVILSHVNDAGFWMFKEYFGLTVKETFLTWSLLETIISVSGIIFILFISL
                     FV"
     gene            complement(4137..5690)
                     /gene="gntK"
                     /locus_tag="O6Y56_002109"
     CDS             complement(4137..5690)
                     /gene="gntK"
                     /locus_tag="O6Y56_002109"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HDB5575355.1"
                     /translation="MKYMIGVDIGTTSTKSVLYDENGTFIMKHQIGYDLHTPNVDVSE
                     ENPDELFDAVLMTIKYIMRESKVNQDDIKFVSFSAQMHSLIAMDQQHQRLTNNITWAD
                     NRAAKYATVINEVHDGNAIYQRTGTPIHPMSPLAKIFWMKHEWQDVFQRTAKFADIKT
                     YIFYHLFDRYIIDYSMASATGMFNLETLDWDVGALELLGISEEMLPELVPTAYVMKGM
                     KERYATLMGLNEDTPFVIGASDGVLSNLGVNSVGKGEVAVTIGTSGAIRTVIDKPRTD
                     YKGRIFCYVLTEDHYVIGGPVNNGGVVLRWLRDELLASEVETAKRLGVDPYDVLTQIA
                     KRVKPGADGLIFHPYLAGERAPLWNANARGSFFGLTLSHKKEHMIRAALEGVLYNLYT
                     VYLALIEVMNETPKMIKATGGFAKSEVWRQMMSDIFDTELVVPESYESSCLGACVLGL
                     KAVGDIEDFSIVSSMVGATNNHTPIKENVAVYQELVSIFINLSRSLTENYEQIADFQR
                     QHMAENKTQ"
     gene            complement(5714..6394)
                     /locus_tag="O6Y56_002110"
     CDS             complement(5714..6394)
                     /locus_tag="O6Y56_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDB5575356.1"
                     /translation="MMYGYPEKWLEGMTTGEGIAAELRLGIVNGHIAEGTLLTENQMA
                     KQFNVSRSPIRDAFKLLQQNQLIQLERMGAHVLPFGEQEKKEMYDLRLMLESFAFSRV
                     KNQERLPIVKEMKKQLEMMKVAVKFEDAESFTKHDFEFHETLIKASNHQYLNSFWSHL
                     KPVMMALVLTSMRQRMQQNPQDFERIHHNHQVFIDAVEQYDSQILKEAFHLNFDDVGK
                     DIEGFWLN"
     gene            complement(6548..7312)
                     /locus_tag="O6Y56_002111"
     CDS             complement(6548..7312)
                     /locus_tag="O6Y56_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDB5575357.1"
                     /translation="MSNYSTGELAKLCNVTTRTIQYYDRKGILKPQGFTEGKRRVYTE
                     QQRQTLELILLLKDLGCALSDIDMLLKGEGTLKTLNTLLTMKQQEINQQVKQQQAVLY
                     KIKNVQYYVNETSTSPITHLKDIEHVMSKSAEMKSIRRNIWISAGIIGIIQYSSIISA
                     ILMKNKWPFLIALPFMIGYGIGVTFYYQQKVAYLCPNCQHIFSPSLWAVIKAKHTATT
                     RRFECPNCHETHYCIEVPKAHMSTEQLEISHIQHNN"
     gene            complement(7477..8169)
                     /locus_tag="O6Y56_002112"
     CDS             complement(7477..8169)
                     /locus_tag="O6Y56_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase family protein"
                     /protein_id="HDB5575358.1"
                     /translation="MYVDRKPSLYLEDLRHDFKNSLSKFENGDEAFDTLLGFVELDHI
                     YSSALKEISTKLSILDDNFNHIYKHNPIHHMERRVKEMRSLIEKLNRKGLQISAETAK
                     EHILDIAGIRVVCNYLDDIYLIEEMLLKQEDVQLIKRKDYIQHPKENGYRSLHIVVSI
                     PVFLAERVEVLPVEIQIRTIGMDMWASLEHKIRYKNNAETEKYRDLLKECATEITEVE
                     DKLQQIHSEITE"
     gene            complement(8400..8816)
                     /locus_tag="O6Y56_002113"
     CDS             complement(8400..8816)
                     /locus_tag="O6Y56_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2188 domain-containing protein"
                     /protein_id="HDB5575359.1"
                     /translation="MPFTMKGYPEKWKEFEVIKRQKAIEIANAMLKEGYLEKDVVPIA
                     AKKAKDWYRALSKEEIKALEEENFVQFHTATMEKTEVDSEYATTDNEEHIQEQSNQDK
                     SYFDSESIGNQSGGVRQREPLMDGPHPKVVESFKDV"
     gene            complement(8955..10778)
                     /locus_tag="O6Y56_002114"
     CDS             complement(8955..10778)
                     /locus_tag="O6Y56_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000586397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HDB5575360.1"
                     /translation="MIIPAIIGYLFGNFQFGLLVATGTLAHIYVFKGPSRSKLRTVII
                     CNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVTFSLPI
                     NLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLITKLLHTYN
                     DKSAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLELN
                     AKQIRPLPDELIEMMDHIIAQLDNSDENVRYWRKEVTVTEEFQNLFNHILKIDEMVHA
                     NEARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFNFEKAYW
                     IPLSAHTILLGTSTIHAIERGMARGLGTILGVLVLSVILLFSIPTPVAVILMGIAALF
                     TEALVGANYAIAVVFITIQVILMNGLASQNLTINIAFPRVIDVAMGIVIAIIGLFVLG
                     QRTASALLPNVMAEVVRKEATLFHYLFSENQYKDDVYQKNTAMNLSVKLNNMTQVYNA
                     ANGELFSDKTLIQNYYPSLFALEEIIFMLNRAMANEDRLTINEQLMGEYLATFENIAK
                     HLELNTELEIKILPDLPQYNYIQSAMMNIQHNGFRERDKNV"
BASE COUNT         3309 a         2160 c         1640 g         4044 t
ORIGIN      
        1 attttcttcg atttcttcaa ccacaccata attaccgtga ccattttcag ttcctaaacc
       61 agaatgagaa atatgatgat tgttttcagt gatttcctcg attggtcctt gtgcttgacc
      121 atgttcttct ggtagttcat ctactagttc aatcaaatta ctttcagttg tatattcttt
      181 cgtatcttca actgttgtat ggtcggtcac tgcgccagtt acaatacctt ttgtagactc
      241 ttcgtcaaat tcaactaagt tagactcagt tgttacttgg ccaccacctg ggtttgtatc
      301 ttcttcatat tcaacaacgt cagcgtgatg ttttgaattt tcatgtgtcg attcttcaaa
      361 gtcaattgga tttgattcct cagaggactc agtgtatcct ccaacgtgac ccgcttcgct
      421 atccacagca gtatggtaat cgatatcaat agctgatgaa tccgtttctt ctattgtttc
      481 aatgtatcca tcaacataac caccttcacc atctatagct gtgtggtaat caatgtcaag
      541 cggtgtattg tcttgatttt cttctgtttc aataatttgc ttctcatcgt actgtccact
      601 gatagaacca ttaccactat cttcagagaa ttcgaagtta ttagagtcta cgattggtcc
      661 atattttcca tcaccattag ctttattact atataaaact aacccattat cccatgttaa
      721 tgtatagccg tggttataat aataatatgt tttatagtga ttttcagggt atccagttaa
      781 ttgagttcta aagttcactt cactcgtacc atttaagtaa tctccggtgt aatgaattac
      841 atatgtttta tctaatttgt caaaatttaa tgagtagcta ccattgtttt gtacttttaa
      901 tttatcactc atttgattcg ttacatcttt taattgtgtg ctgtccactg tatttgcata
      961 aacactttgt ggtagcccat tttcagttcc aacatactca tatattttaa catttggttg
     1021 tgttccattc tcattacttc cttgtgtcaa catacccgtt acagtaacac tgtctgaatt
     1081 gtttccattt ataggcttaa tatatgctac gtgtgtaaat ttattttttt ctttgtcaaa
     1141 cgtttcaatc gaaccattta catttgtata atgattttta acaccatctt tatatgttat
     1201 ttgcatagtt cctgatgttt ctttgccatt taattttgaa gtaattgttt gttgtccatt
     1261 gctttgaact gttttaggat ctatgaataa gtttatttct aaattagccg taacattcac
     1321 tttatctttg atgtaatcaa taaacgtata tctaattcgg ccgttatcta atacctgtcc
     1381 tttagccatt actaatgaac catttttaat atctggaact tttcttgtag ttgatactcc
     1441 atgcgtgttt acattatttg ataatgtaaa atcaaaataa tctcctgttt tcaatccatc
     1501 ttgaaatttt agtttatact tcaatactac acgttgccct tcatgaggct gaacattatt
     1561 tccttttggc gcttcaattt tactttcatc ttctactgta actttacttg tcacatctgt
     1621 acccgtttcc actttcgcgt cactagcgtc cactacatct gctgatcttg tcacacgtgg
     1681 tttactttct gatgctgttc ttggctgtgc cacttcaact tgtgtttctg ctgcttgatt
     1741 ttgtgtagcc tttttaggtg ttaaatctac ttgtctttga tctccgctat tgtcttgagg
     1801 ttgtgtcgtt tccttaactt gaggtttcgc ttcttcctta actacctctt ctttaactgt
     1861 ttctacattt gctggttgtg cagttagtgg tgcttgtact gcttttggta cttcttgagt
     1921 tgttacttgt gttgcgtttg acggttgttc tgttactgtt gcgttatatg attgagtttc
     1981 ttctatatga ttaacgttag ttgcagttgt ttgtgtttca cttactttat tatcagtagc
     2041 tgaattccca ttttcttcta ctgtagttgt cttttgttct gatgctgcag cttctttatc
     2101 ttgtcccatc ccaacaacga tcattgttcc taagaatact gatgctgctc ccaatttatg
     2161 ttttctaatg ccgtacctaa gattgttttt cactataata tctcccttta aatgcaaaat
     2221 tcattaattt ttttaaactt aataaatgca agtctatatt gttcggtttt taaaagcaat
     2281 acaaaaaagc gagttaatga aaagttaaga ttgtcattaa ttttatgtta attgataatt
     2341 ttattatttg aaatatacct ataaattgta ttcaagtcgt cacaaaccct tgtcaaacaa
     2401 ggcttgtact ttttatactt atttttaaaa ttaaattaat cattatctaa tttaaaacaa
     2461 tatactaaac gtttcataat tatcgcctgt acaatacgca caaaaatatg tcttgaaacg
     2521 cctttcatta cactaaaata accaatatac tttttatatc gttcggattc taagtatttc
     2581 agacgatttt ctgcataaaa ataaacgtgt ttcgaggcaa tatattgtaa ttacctaaaa
     2641 acacgtttac ttaatattta gttaaacaaa taagctgatg aataaaatga agatgatacc
     2701 tgaaacggaa ataatcgttt ctaataatga ccatgttagg aatgtttctt ttacagttaa
     2761 accaaaatat tctttaaaca tccaaaatcc tgcgtcattt acatgagaca aaatcacact
     2821 acctgcacct atcgcaagta caactaatgc aacatttaca tctgatgatt gtaataatgg
     2881 taagacaata cctgtagttg aaatcgcagc tactgtagcc gaacctaatg cgatacgtag
     2941 cacagctgca acaatccatg ctagtaaaat cggagacatc tctgtacctt caaacatttt
     3001 agcaattgta tttccgacac caccgtcaat taatacttgt ttaaatgtac cgccaccgcc
     3061 aataatcaat aacatcattc cgattggata aatcgcattc gtcactgatt ccataatatg
     3121 attcatctta cgttttctca ttaatcccat cgtaacgatt gcaaataata ctgctattag
     3181 catggctgtc cctgctgttc ctatcatata aatgatagat tcaaatagat ttgtaggttt
     3241 gtcgtgcccg gttacaagtt gcgttatcgt agacactaac attaatatga ctggtaatgt
     3301 tgctgttaat aaactcatac caaatcctgg catctcttga tccttaaatt ctttttgtgc
     3361 acctaacgct gaaatatcgc cttctcgtgt atacgcagac ggaatcattt tttgtgcaat
     3421 tttgttaaat ataggtcctg caatgagtgt aactggaatg gcaataatca taccgtatag
     3481 taatacatct cctacattcg cctttaattc ttttgcgatg actaccggtc ctggatgtgg
     3541 tggtaaaaag ccatgtgtca ctgataaagc tgttaccata ggtagtccta gttttaacac
     3601 tgaaacattt gcgcgttttg ctactgtaaa tactaatgga atcagtaaga ctaaacctac
     3661 ttcaaagaat aatgcaatcc cgacgataaa tgctgcaaca agcattgccc attgtacatg
     3721 tttttgacca aatttttgga tcaacgtgtc tgcaattcga gttgcaccac caccatcagc
     3781 aagtaatttc ccaagtatag cacctaaacc gaatatcagt gcaatgtggc cgagcgtact
     3841 gcccatccct ttctcaatcg tctccataat tttagtcaat ggtataccta gcattaacgc
     3901 tgtaatcatc gatgtgataa ttaatgaaat aaatgtattt aatttaaatc caataattaa
     3961 tactaataaa ataacgatac ctaaaacaac actgattaac ggccatattt cgttaaacat
     4021 gacattcccc tctttctctt ttcaatagaa tgtaacaccg tcgtcgcgca cgtattccac
     4081 ataatatata gtagtcatgg cacaacaact ttatctaaga tgcttgagtg acgtatttat
     4141 tgtgttttat tttcagccat atgttggcgt tgaaaatctg caatttgttc ataattctct
     4201 gttaaagaac gacttaaatt gataaaaatg gatacgagct cttgataaac agcgacattt
     4261 tctttaatcg gcgtatgatt gtttgtggca ccgaccatcg atgaaacgat tgaaaaatct
     4321 tcaatgtcac ctacagcttt aagcccgagt acgcaggcac ctaagcatga actttcataa
     4381 ctttcaggaa ccactaactc tgtgtcaaat atatctgaca tcatttgacg ccatacttca
     4441 cttttcgcaa aaccacctgt tgcttttatc atcttaggtg tttcattcat tacttcaata
     4501 agcgcaagat agacggtata caaattgtaa agaacacctt ctaatgcagc gcgaatcata
     4561 tgttcttttt tatgagataa agttagaccg aagaatgaac ctcttgcatt tgcgttccaa
     4621 agcggtgcac gttctccagc taaataggga tggaatatta aaccatctgc acctggttta
     4681 acacgcttag caatttgagt taaaacatca taaggatcaa caccgagacg tttcgcagtt
     4741 tcaacttcgc ttgctaacaa ctcatcgcgc aaccatctca atacgacacc accattattt
     4801 acagggcctc caatgacgta gtggtcctct gttaagacat aacaaaatat tctacctttg
     4861 taatcagtac ggggtttatc tatcaccgta cgaatcgctc cagatgtacc gattgtgaca
     4921 gcaacttctc ctttaccaac actattgaca cccaaattag aaagcacacc atcactcgca
     4981 ccaataacaa acggtgtatc ttcattaagc cccattaatg ttgcataacg ttctttcata
     5041 cctttcatca catacgctgt tggcactaat tctggcaaca tttcctcgga aataccaagc
     5101 aattctaatg ccccaacatc ccaatctaat gtttctaaat taaacatccc tgttgcggaa
     5161 gccattgaat aatcaatgat atatctatca aataaatgat agaaaatgta tgttttaata
     5221 tctgcaaact tagcagtacg ttgaaataca tcttgccatt catgtttcat ccaaaaaatc
     5281 ttcgctaatg gcgacatagg atgaataggc gtacctgttc gctgataaat cgcattgcca
     5341 tcatgcactt catttattac tgttgcatat tttgcagcgc ggttatctgc ccaagtaata
     5401 ttatttgtta atctttgatg ttgctgatcc atcgcaatca agctatgcat ttgcgcacta
     5461 aatgacacaa atttaatatc atcttgatta actttcgatt ccctcattat gtatttaatt
     5521 gtcattaata ccgcatcaaa taattcatct gggttttctt ctgagacatc aacgtttggt
     5581 gtgtgtaaat catagccgat ttgatgtttc atgatgaaag ttccattttc atcatataag
     5641 actgacttgg tactcgtcgt tccaatgtcg acaccaatca tatatttcat gacaaatcct
     5701 tctttctttc attttaattc aaccaaaatc cttcaatatc tttaccaaca tcgtcgaaat
     5761 ttaagtgaaa cgcttctttc aaaatttgac tgtcgtattg ttccactgca tcaataaaca
     5821 cttgatgatt atgatgtatg cgttcaaaat cttgcgggtt ctgttgcata cgttgtcgca
     5881 tggatgttaa aacgagtgcc atcattactg gttttaaatg actccaaaat gagtttaaat
     5941 attgatgatt agatgctttg attaatgttt catgaaattc aaagtcatgc ttcgtaaatg
     6001 attctgcatc ctcaaatttt actgccactt tcatcatttc aagttgtttc ttcatttctt
     6061 ttacgatagg tagtcgctct tgatttttaa ctcttgaaaa tgcaaatgac tctaacatca
     6121 gtcgcaaatc gtacatttct ttcttttctt gttccccaaa cggcaacaca tgtgcaccca
     6181 ttctttctaa ttggatgagt tgattttgtt gcaataattt aaatgcatct cgaattggcg
     6241 aacgactcac attaaattgc tttgccattt gattttcagt gagtaacgta ccttcagcta
     6301 tgtgaccatt cacaatgcct aagcgtaatt ctgctgcgat accttctcca gttgtcatac
     6361 cttccaacca tttctctgga tatccataca tcatcaaagc cactccttca ttacacgaca
     6421 tacttgtata caagtatgtt aatatagttc tcaagtgttt gcaagcgctt tctttacgcg
     6481 tactaaaata gtgaccaccc cttttcgatg aaaatttaaa gggaatggtc actatcacac
     6541 gaatgattta attgttatgt tgtatgtggg atatttctaa ttgttctgta ctcatatgcg
     6601 ctttaggtac ttcaatgcaa taatgcgttt catgacagtt tggacattcg aatcgacgtg
     6661 ttgtcgctgt atgtttcgct ttgataactg cccacaaaga cggtgagaat atatgctggc
     6721 agttaggaca taaataggca accttttgtt ggtaataaaa agtaacacca atgccataac
     6781 cgatcataaa tggtaaagca attaagaacg gccatttatt tttcatcaaa attgcgctta
     6841 taatgctaga atattgaatt attcctataa taccagcact aatccaaatg ttacgacgaa
     6901 tacttttcat ttcagctgat ttactcatga catgctctat gtcttttaag tgtgtgattg
     6961 gagacgtcga cgtttcattt acgtaatatt gaacattttt aattttgtat aataccgctt
     7021 gttgctgttt gacttgttgg ttaatttctt gttgtttcat agttagtaaa gtattgagcg
     7081 tcttcaaagt accttcacct tttagcaaca tatctatatc gcttaacgca caacctaaat
     7141 ctttaagcaa taagattaac tctaatgttt gtcgctgttg ttctgtatac acacgacgct
     7201 ttccttctgt aaatccttgt ggtttcaaaa tacctttgcg atcataatat tgaatcgttc
     7261 gtgttgtcac attgcataat tttgcgagtt ctccagtcga atagttagac atagattcca
     7321 cctcctacaa tcaccatagt tgatgacccg acgtcacgag caagtacaat ttccacattt
     7381 taaaggaatt tattatacta ggcgtcttat ttttgtgatt tcgtaccatg ttgatttaca
     7441 aaatcactca aattaagcaa cactcctact aaacgtctac tctgttattt cagaatgaat
     7501 ttgttgtaat ttatcttcaa cttcagtaat ctctgtcgca cattctttca ataaatctcg
     7561 atacttttcc gtctctgcat tgtttttata acgtatttta tgttctaaac ttgcccacat
     7621 atccatacct atcgttctaa tttgaatttc aacaggcaat acctcaacgc gttctgctaa
     7681 aaagactgga atggatacaa cgatatgtaa actgcggtaa ccattttctt tagggtgctg
     7741 aatataatct ttacgtttta tcaattgtac gtcttcttgt ttaagcaaca tctcttcaat
     7801 caaataaata tcatctaagt aattacatac tacgcgaatt ccggcaatat ccagtatgtg
     7861 ttctttggca gtttctgcgc taatctgtaa tcctttacga ttaagctttt ctattaaact
     7921 acgcatttct ttcacacgtc gctccatatg atgtatagga ttgtgtttat aaatgtgatt
     7981 gaaattgtca tctaaaatac tcagtttagt gcttatttcc tttagtgctg atgaataaat
     8041 atgatctaac tctacgaaac ctaataacgt atcaaatgct tcatcaccat tttcaaattt
     8101 acttaaacta tttttaaaat catgtcgcaa atcctctaaa tataatgatg gttttcgatc
     8161 tacatacatt tttatactta cctccgatat ataatcatct ttattgtacc taacatttta
     8221 ttaagataat actaatacac tatcgaactt tgggctgata ctgaaacagc acaaagaaat
     8281 tcaaacaatt cgaattatgt atcaaaacct tcaattatag gaagtgattt taaaatgatt
     8341 taatgcaaaa aaacacctgt taccgttata taggtacaag tgcttaattg atagagatgt
     8401 tatacgtctt taaatgattc cacaactttt ggatgtggac catccataag cggttctctt
     8461 tgtcgaacac caccactttg gttgccaatt gattcgctat caaagtacga tttatcttga
     8521 tttgattgtt cttgaatatg ttcttcatta tcagttgttg catattcact atccacctct
     8581 gttttttcca ttgttgctgt atggaattgt acgaagttct cttcttctaa tgctttgatt
     8641 tcttctttcg ataacgctcg ataccaatct ttcgcttttt tcgccgcaat aggaacaaca
     8701 tctttttcaa gatatccttc ttttaacatt gcattcgcaa tttctatcgc tttttgccgt
     8761 ttaattactt caaattcttt ccatttttcg gggtaacctt tcattgtaaa gggcatttcc
     8821 ttaacctcca atatgttata attcatgtta tataccacca taattataaa atgaaacata
     8881 ttaaacacaa ttttttagac tcccgtcata ataacttcag acaaacgtta gtctgacctg
     8941 ataaatattt tattttaaac gttcttgtct ctctcacgaa aaccattgtg ttgaatattc
     9001 atcattgctg attgaatata attatactgt ggcaaatctg gtaatatctt tatttctaat
     9061 tctgtattta attctaaatg cttagcgatg ttttcaaatg ttgctaaata ctcgcccatt
     9121 aattgttcat ttattgtaag tctatcttca ttagccatgg ctctatttaa cataaagata
     9181 atttcttcta atgcgaataa gctaggataa taattttgaa tcaatgtctt atcactaaat
     9241 aattcaccat tagctgcatt ataaacttgc gtcatgttat ttaatttcac agataggttc
     9301 atagccgtgt ttttctgata cacatcatct ttatattggt tttcagaaaa taaataatgg
     9361 aagagtgttg cttctttacg aacaacttca gccattacat taggaagcaa tgcggatgcg
     9421 gtacgttgtc caaggacaaa taaacctatg attgcaatca caatacccat tgcaacgtca
     9481 ataactcttg gaaacgcaat gttaattgtt aaattctgtg atgctaagcc gttcattaaa
     9541 ataacttgta ttgtaataaa gactactgca atcgcataat ttgctcccac caatgcttca
     9601 gtaaataatg ctgcaatgcc cattaaaatt actgcaacag gtgttggtat tgaaaataac
     9661 aatataacag aaagtactaa cacacctaaa atagtaccta aacctcgtgc catacctctc
     9721 tcgattgcat gtatagttga tgttcctagt aatattgtat gtgcagataa cggtatccag
     9781 tatgcttttt caaaattaaa cattaacgca ataaatatcg ctatcatcat aatcgctgta
     9841 tatctcaatg tatttctaaa aacaatagag tctaatgtta aattttgata aatgcgttta
     9901 ctatataaag gttttcgcat gtctgcttca tacgcaatac gcgcttcatt tgcatgcacc
     9961 atttcatcaa ttttcaatat atggttgaat aaattttgaa attcctctgt tactgtcact
    10021 tcttttcgcc aatatcttac attttcatca ctattatcta gttgtgcaat gatatgatcc
    10081 atcatttcaa ttaactcatc tggcaatggt cgaatttgtt tagcgttcaa ctctaacagt
    10141 tcagaataaa tcccttgggc agatgtgtgt aataataata atttttggaa acgtctactt
    10201 aatttatcgt tacttgaagt agaagtgatt aataatttat cagatgcttt aaaactatct
    10261 accgctgttt ttgctacttg taaaaaagca gatttatcat tataagtgtg taacaactta
    10321 gttatgagtt taaaatcatt ttgaattgct tgttcttcag ctttgttttt agaaaatacg
    10381 atcgtgatta acaccatcat agtggcaagt ataccgccta ctaaaatcgc aaagcctcta
    10441 tataatgctt cttcgggagc tataggtaag ttaatgggta gactgaatgt cacaatgaag
    10501 aatgtcgatg acggtccagc tatttttaag gcagtaaata tataaaatgg tataaccgta
    10561 acaattaata atgtcattcc aaaaacgagt ggcgttttgg ctgttagcgt accaagcatc
    10621 atacatattg caaacgctaa attacaaatt attacagttc gcagcttaga tcgcgacgga
    10681 cctttaaaaa cataaatatg ggctagtgtt ccggttgcaa ctaataatcc aaattggaaa
    10741 ttaccaaata agtaaccgat tattgcagga ataatcatta acagtccctg tcttacacct
    10801 ttataaaagt ctaagttaag tcgattgatt tttatgagtg atgtcaaaaa gatgtcattt
    10861 cgacttctcc tttccttgtc aaaatatttc cataatcttt ttattagcat agttaaaatg
    10921 aatttgttgc tataaatttt aattacgcaa catatgtcat tataacacct tatgctcaat
    10981 tatctaaatt taaaaacttt taaagtccaa ttaaaattat tttctaatgt tatttaacat
    11041 cgttgaacct ttggtcgccc acctttgcgc tagttaaaat ttatttgtga catgttgaga
    11101 ttattttagt gaattataca tttagggtta gaaatacatt cacatagact tag
//
LOCUS       DALMNS010000094        10575 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.094, whole genome shotgun sequence.
ACCESSION   DALMNS010000094 DALMNS010000000
VERSION     DALMNS010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10575
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.094"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            18..1547
                     /gene="aur"
                     /locus_tag="O6Y56_002115"
     CDS             18..1547
                     /gene="aur"
                     /locus_tag="O6Y56_002115"
                     /EC_number="3.4.24.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001225028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloproteinase aureolysin"
                     /protein_id="HDB5575361.1"
                     /translation="MRKFSRYAFTSMAAVTLLSTLSPAALAIDSNNKPANSDIKFEVT
                     QKSDAVKALKELPKSENVKNIYQDYAVTDVKTDKKGFTHYTLQPSVDGVHAPDKEVKV
                     HADKSGKVVLINGDTDAKKVKPTNKVTLSKDDAADKAFKAVKIDKHKAKNLKDKVIKE
                     NKVEIDGDSNKYVYNVELITVTPEISHWKVKIDAQTGEILEKMNLVKEAAETGKGKGV
                     LGDTKDININSIDGGFSLEDLTHQGKLSAFSFNDQTGQATLITNEDENFVKDEQRAGV
                     DANYYAKQTYDYYKDTFGRESYDNHGSPIVSLTHVNNYGGQDNRNNAAWIGDKMIYGD
                     GDGRTFTSLSGANDVVAHELTHGVTQETANLEYKDQSGALNESFSDVFGYFVDDEDFL
                     MGEDVYTPGKEGDALRSMSNPEQFGQPAHMKDYVFTEKDNGGVHTNSGIPNKAAYNVI
                     QAIGKSKSEQIYYRALTEYLTSNSNFKDCKDALYQAAKDLYDEQTAEQVYEAWNEVGV
                     E"
     gene            1914..2363
                     /locus_tag="O6Y56_002116"
     CDS             1914..2363
                     /locus_tag="O6Y56_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HDB5575362.1"
                     /translation="MKKSKRLEIVSTIVKKHKIYKKEQIISYIEEYFGVRYSATTIAK
                     DLKELNIYRVPIDCETWIYKAINNQTEQEMREKFRHYCEHEVLSSIINGSYIIVKTSP
                     GFAQGINYFIDQLNIEEILGTVSGNDTTLILTASNDMAEYVYAKLFK"
     gene            2366..2533
                     /locus_tag="O6Y56_002117"
     CDS             2366..2533
                     /locus_tag="O6Y56_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575363.1"
                     /translation="MYQMNNKNLFRITCTQVSYQILTCVRVFLWKERIHSHSFDCIKN
                     FIQHVFVGLFE"
     gene            2710..3945
                     /gene="arcA"
                     /locus_tag="O6Y56_002118"
     CDS             2710..3945
                     /gene="arcA"
                     /locus_tag="O6Y56_002118"
                     /EC_number="3.5.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase"
                     /protein_id="HDB5575364.1"
                     /translation="MTDGPIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIP
                     YLEVAQKEHDHFAQVLREEGVEVLYLEKLAAESIENPQVRSEFIDDVLAESKKTILGH
                     EEEIKALFATLSNQELVDKIMSGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTR
                     DPQASIGHGITINRMFWRARRRESIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGD
                     ELVLSKDVLAIGVSERTSAQAIEKLARRIFENPQATFKKVVAIEIPTSRTFMHLDTVF
                     TMIDYDKFTMHSAILKAEGNMNIFIIEYDDVNKDIAIKQSSHLKDTLEDVLGIDDIQF
                     IPTGNGDVIDGAREQWNDGSNTLCIRPGVVVTYDRNYVSNDLLRQKGIKVIEISGSEL
                     VRGRGGPRCMSQPLFREDI"
     gene            3978..4988
                     /gene="argF"
                     /locus_tag="O6Y56_002119"
     CDS             3978..4988
                     /gene="argF"
                     /locus_tag="O6Y56_002119"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDB5575365.1"
                     /translation="MTEIQKPYDLKGRSLLKESDFTKAEFEGLIDFAITLKEYKKNGI
                     KHHYLSGKNIALLFEKNSTRTRAAFTVASIDLGAHPEFLGKNDIQLGKKESVEDTAKV
                     LGRMFDGIEFRGFSQQAVEDLAKFSGVPVWNGLTDDWHPTQMLADFMTIKENFGYLEG
                     INLTYVGDGRNNIAHSLMVAGAMLGVNVRICTPKSLNPKEAYVDIAKEKASQYGGSVM
                     ITDNIAEAVENTDAIYTDVWVSMGEESEFEQRINLLKDYQVNQQMFDLTGKDSTIFLH
                     CLPAFHDTNTLYGQEIYEKYGLAEMEVTDQIFRSEHSKVFDQAENRMHTIKAVMAATL
                     GS"
     gene            5079..6509
                     /gene="arcD"
                     /locus_tag="O6Y56_002120"
     CDS             5079..6509
                     /gene="arcD"
                     /locus_tag="O6Y56_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine-ornithine antiporter"
                     /protein_id="HDB5575366.1"
                     /translation="MNESGDNKLSKSSLIGLVIGSMIGGGAFNIMSDMGGKAGGLAII
                     IGWIITAIGMISLAFVFQNLTNERPELDGGIYSYAQAGFGDFVGFISAWGYWFSAFLG
                     NVAYATLLMSAVGNFFPIFKGGNTLPSIIVASLLLWGVHFLILKGVETAAFINSIVTV
                     AKLIPILLVIICMIIAFNFDTFKTGFFGMTSEGVLPFSWASTMSQVKSTMLVTVWVFI
                     GIEGAVIFSSRAKNKKDVGSATVIGLISVLIIYFLLTVLAQGVILQNHIPQLDSPSMA
                     QVLATIVGAWGSTLVNIGLIISVLGAWLGWTLLAGELPFIVAKDGLFPKWFAKENKNG
                     APVNALLITNILVQLFLISMLFTQSAYQFAFSLASSAILYPYMFSAFYQVKYTLEHRQ
                     QATTKQWTIGIIASIYAIWLIYAAGINYLLLTMLLYIPALLVYSIVQKNNQTRLIKSD
                     YILFMIIIVLAVIGLIKLLMGTINVF"
     gene            6526..7467
                     /gene="arcC"
                     /locus_tag="O6Y56_002121"
     CDS             6526..7467
                     /gene="arcC"
                     /locus_tag="O6Y56_002121"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HDB5575367.1"
                     /translation="MKEKIVIALGGNAIQTKEATAEAQQTAIRRAMQNLKPLFDSPAR
                     IVISHGNGPQIGSLLIQQAKSNSDTTPAMPLDTCGAMSQGMIGYWLETEINRILTEMN
                     SDRTVGTIVTRVEVDKDDPRFDNPTKPIGPFYTKEEVEELQKEQPDSVFKEDAGRGYR
                     KVVASPLPQSILEHQLIRTLADGKNIVIACGGGGIPVIKKENTYEGVEAVIDKDFASE
                     KLATLIEADTLMILTNVENVFINFNEPNQQQIDDIDVATLKKYAAQGKFAEGSMLPKI
                     EAAIRFVESGENKKVIITNLEQAYEALIGNKGTHIHM"
     gene            7566..8270
                     /locus_tag="O6Y56_002122"
     CDS             7566..8270
                     /locus_tag="O6Y56_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HDB5575368.1"
                     /translation="MTENFILGRNNKLEHELKALADYINIPYSILQPYQSECFVRHYT
                     KGQVIYFSPQESSNIYFLIEGNIIREHYNQNGDVYRYFNKEQVLFPISNLFHPKEVNE
                     LCTALTDCTVLGLPRELMAFLCKANDDIFLTLFALINDNEQQHMNYNMALTSKFAKDR
                     IIKLLCHLCQTVGYDQDEFYEIKQFLTIQLMSDMAGISRETAGHIIHELKDEKLVVKD
                     HKNWLVSKHLFNDVCV"
     gene            8620..>10575
                     /gene="clfB"
                     /locus_tag="O6Y56_002123"
     CDS             8620..>10575
                     /gene="clfB"
                     /locus_tag="O6Y56_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MSCRAMM family adhesin clumping factor ClfB"
                     /protein_id="HDB5575369.1"
                     /translation="MKKRIDYLSNKQNKYSIRRFTVGTTSVIVGATILFGIGNHQAQA
                     SEQSNDTTQSSKNNASADSEKNNMIETPQLNTTANDTSDISANTNSANVDSTAKPMST
                     QTSNTTTTEPASTNETPQPTAIKDQATAAKMQDQTVPQEANSQVDNKTTNDANSIATN
                     SELKNPQTLDLPQSSPQTISNAQGTSKPSVRTRAVRSLAVAEPVVNAADAKGTNVNDK
                     VTASNLQLQKTTFDPNQSGNTFMAANFTVTDKVKSGDYFTAKLPDSLTGNGDVDYSNS
                     NNTMPIADIKSTNGDVVAKATYDILTKTYTFVFTDYVNDKENINGQFSLPLFTDRAKA
                     PKSGTYDANINIADEMFNNKITYNYSSPIAGIDKPNGANISSQIIGVDTASGQNTYKQ
                     TVFVNPKQRVLGNTWVYIKGYQDKIEESSGKVSATDTKLRIFEVNDTSKLSDSYYADP
                     NDSNLKEVTDQFKDKITYKYQNVASINFGDINKTYVVLVEGHYDNTGKNLKTQVIQEN
                     IDPATGKDYSIFGWNNENVVRYGGGSADGDSAVNPKDPTPGPPVDPEPEPEPTPDPEP
                     SPDPEPEPTPDPEPSPDPDPEPTPDPEPSPEPDPDSDSDSDSGSDSDSGSDSDSDSDS
                     DSDSDSDSDSDSDSDSDSDSDSDSDSDS"
BASE COUNT         3905 a         1556 c         2036 g         3078 t
ORIGIN      
        1 ttcaggagga atgaaatgtg aggaaatttt caagatatgc atttacaagt atggcagcag
       61 taaccttgtt gagcacttta tcaccagcag cattagcgat tgattcaaac aataaaccag
      121 ctaattctga tattaaattt gaggtgactc aaaagagtga tgcggtcaaa gcattaaaag
      181 aattgcctaa atccgaaaat gtaaaaaata tttatcaaga ttacgctgtt actgatgtaa
      241 aaactgataa aaaaggattt acgcattaca cattgcaacc gagtgttgat ggtgttcatg
      301 cacctgacaa agaagtgaaa gtacacgcag acaaatcagg aaaagtcgtt ttaatcaatg
      361 gggatactga tgcgaagaaa gtaaagccaa cgaataaagt gacattaagt aaagatgacg
      421 cagccgacaa agcatttaaa gcagttaaga ttgataagca taaagcgaaa aatcttaaag
      481 ataaagtcat taaagaaaac aaagttgaaa tcgatggtga cagtaataaa tacgtttata
      541 atgttgagtt aattacagtg acaccagaaa tttcacattg gaaagttaaa attgatgctc
      601 aaactggcga aattttagaa aaaatgaact tagttaaaga agctgcagaa actggtaaag
      661 gaaaaggtgt acttggcgat acaaaagata tcaatatcaa tagtattgac ggtggattta
      721 gcctagaaga tttaacgcat caaggtaaat tatcagcatt tagctttaat gatcaaacag
      781 gtcaagcaac attgattact aatgaagatg aaaacttcgt aaaagatgag caacgtgctg
      841 gcgtagatgc aaattattac gctaaacaaa catatgatta ttacaaagac acatttggtc
      901 gtgaatcata tgacaaccat ggtagtccaa ttgtttcatt aacccatgtt aataactatg
      961 gtggtcaaga taacagaaat aatgccgcat ggatcggtga caaaatgatc tatggtgatg
     1021 gtgatggtcg cacattcaca agtttatcgg gtgcaaatga cgtagtggca cacgaattaa
     1081 cacacggtgt gacacaagag actgcgaact tagaatataa ggaccagtca ggcgctctaa
     1141 atgaaagctt ttcagatgtt tttggatact ttgtagatga cgaggatttc ttaatgggtg
     1201 aagatgtcta cacacctgga aaagagggag acgctttacg cagcatgtca aacccagaac
     1261 aatttggtca accagctcat atgaaagact atgtattcac tgaaaaagat aatggtggcg
     1321 tacatacgaa ttctggaatt ccaaataaag cagcttataa cgtgattcaa gcaataggga
     1381 aatctaaatc agaacaaatt tactaccgag cattaacgga atacttaaca agtaattcaa
     1441 acttcaaaga ttgtaaagat gcattatacc aagcggctaa agatttatat gacgagcaaa
     1501 cagctgaaca agtgtatgaa gcatggaatg aagtaggcgt ggagtaaaaa tatataaaca
     1561 agaagaagta atgttaaaca cttataaata attaaatttt aaatacagct tatatatggg
     1621 gtatacctac attgattatt gactttgtag gtgtaccctc tttttgtaat tagatgagag
     1681 gagtgtgagg gttgtctgcc gaaagactac tcggcagtct aaaatcatta ctagtagcaa
     1741 atatgtgata attaaatgct gacttagaat acaaaattca ttttaaaagt tgtcacaaaa
     1801 aatttacatg tatttttatt atcttttgca aaacaaagtg ttaaattata aatgaaacat
     1861 gcatgaattt attttttaat acaagaaacg taactaccaa aggagtttac aatatgaaga
     1921 aaagtaaacg attagaaatt gtttctacaa tagttaaaaa gcataagatt tataaaaaag
     1981 aacaaatcat ttcatatatt gaagaatatt ttggtgtaag atatagtgca acaacaattg
     2041 ctaaagactt gaaagaactt aatatatatc gtgtccctat cgattgtgaa acatggattt
     2101 ataaagctat taataatcaa acagaacaag agatgagaga aaagtttaga cactattgtg
     2161 aacatgaagt tctaagttca atcatcaatg gttcatacat tattgtcaaa acctcacctg
     2221 gtttcgccca aggcataaac tattttatcg atcagctaaa tatagaagag atattaggta
     2281 cggtgagtgg aaatgacact acattaatct taactgcctc aaatgatatg gcggaatacg
     2341 tatacgcaaa attatttaaa tagacatgta tcaaatgaat aataaaaatt tgtttcgtat
     2401 cacgtgtact caagttagtt accaaatatt aacttgtgta cgcgtttttt tatggaaaga
     2461 aagaattcat agtcattcat ttgactgtat aaaaaacttt atacaacatg tttttgtggg
     2521 tctttttgaa taaaaaatgt atatttagac ccaaaacacc tttatttatg tataaaaatc
     2581 cattattatg tattgtataa caaaaagata tgaaattttc gactttcttt atgtgaatat
     2641 aatcacatgt aagcgtttga agattgtcta tactctaaat gaattcaaag ataaaaggag
     2701 gaaatagaca tgacagatgg tccaattaaa gtaaatagcg aaattggagc tttaaaaact
     2761 gtgttactta agcgtcctgg aaaagaatta gaaaatttag tacctgatta tttagatgga
     2821 ttactatttg atgatattcc atatttagaa gtagctcaaa aagagcatga ccattttgca
     2881 caggtgctaa gagaagaggg tgttgaagta ctttaccttg agaagttagc agctgaaagt
     2941 attgaaaatc ctcaagtaag aagtgaattt attgatgatg tattagcaga gtctaaaaaa
     3001 acaatattag gtcatgaaga agaaattaag gcattatttg cgacactttc taatcaagaa
     3061 cttgtagata aaataatgtc aggggtacgt aaggaagaaa ttaatccgaa atgcacacat
     3121 ctagtagagt atatggatga taaatatcca ttctatttag atccaatgcc aaacctttat
     3181 tttactagag atccacaagc ctcaatagga cacggtataa caatcaatcg gatgttctgg
     3241 agagcacgac gacgagaatc aatatttatt caatatattg taaagcatca tcctagattt
     3301 aaagatgcga atattccaat ctggttagat cgagattgcc cattcaatat tgaaggcggc
     3361 gatgaacttg ttttatctaa agatgtcttg gctataggcg tttcagaacg tacatctgca
     3421 caagctattg aaaagttagc gcgacgtatt tttgaaaatc cgcaggcgac gtttaaaaaa
     3481 gtagtagcaa ttgaaattcc aactagtcga acatttatgc acttagatac agtatttaca
     3541 atgatagatt atgacaaatt tacaatgcat tcagccattt taaaggcaga aggcaatatg
     3601 aatatattta ttattgaata tgatgacgta aataaagata ttgccatcaa acaatctagt
     3661 catttaaaag atactttaga agacgtacta ggtatagatg atattcaatt cattccaaca
     3721 ggaaatggtg atgtcattga tggtgctaga gagcaatgga atgatggctc aaatacatta
     3781 tgtataagac caggtgttgt agtgacttac gatagaaact atgtatcgaa tgatttattg
     3841 agacagaaag gcattaaagt tattgaaata agtggtagcg agttggtacg tggacgtggg
     3901 ggtcctagat gtatgagtca accactattc agagaagaca tttaacgtaa taaattatag
     3961 aaacgagggt gaaaataatg acagaaattc aaaaaccgta tgatttaaaa ggcagatcat
     4021 tattaaaaga aagtgatttt accaaagcag aattcgaagg acttattgat tttgcaatta
     4081 cattaaaaga gtataagaaa aacggtatta agcatcacta cttatctgga aaaaacattg
     4141 cactactatt cgaaaaaaat tcgacgagaa cgcgtgcagc gtttacagtt gcgtctattg
     4201 atttaggtgc gcatccagaa tttttaggga aaaatgatat tcaattaggc aaaaaagaat
     4261 ctgtagagga tactgcgaaa gtattaggta gaatgttcga tggtattgaa ttccgtggtt
     4321 tttcacaaca agctgttgaa gatttagcga agttctctgg tgtaccggtg tggaatggat
     4381 taacagacga ttggcatcct acacaaatgt tagctgattt tatgacaata aaagagaatt
     4441 ttggatatct agaaggaata aacttaactt acgttggaga tggacgtaat aatattgcgc
     4501 attcattaat ggtagcaggt gctatgttag gtgttaatgt aagaatttgt acacctaaat
     4561 cattaaatcc aaaagaggca tatgttgata ttgcaaaaga aaaagcgagt caatatggtg
     4621 gttcagtcat gattacggat aatattgcag aagcagttga aaatacagat gctatatata
     4681 cagatgtttg ggtatcgatg ggtgaagaaa gtgaatttga acaacgtatt aatttattaa
     4741 aagactatca agtgaatcaa cagatgtttg atttaacagg taaagattca acgatattct
     4801 tacattgttt accagcattc catgatacaa atacacttta tggacaagaa atttatgaaa
     4861 aatatggatt agctgaaatg gaagttacag accaaatctt tagaagtgaa cattcaaaag
     4921 tgtttgatca agctgaaaat agaatgcata caattaaagc agtaatggca gcaacattgg
     4981 ggagttaatc actaaatgga acgatatgaa tatgatgtgt ctgatgatat aagtgtcatg
     5041 tacagacacc tcatattggt attaaaggag aaatgaatat gaacgaatca ggagataaca
     5101 aactcagtaa atcttcttta attggactag ttataggatc catgattggt ggcggtgcgt
     5161 tcaatataat gtctgatatg ggcggtaaag ccggtggatt agccattatt attggttgga
     5221 ttattacagc tataggaatg atttcattag cgttcgtatt tcaaaattta accaatgaac
     5281 ggccggagct agacggtggt atttatagtt atgctcaagc aggatttggc gattttgtag
     5341 gctttatcag tgcttgggga tattggttct cagcgttttt aggcaatgtt gcctatgcaa
     5401 cactattgat gtcagcagta ggtaactttt tcccgatttt taaaggaggc aacacattac
     5461 caagtattat tgtcgcctcg ttactactct ggggtgtcca tttcttgatt ttaaaaggcg
     5521 ttgaaacagc agcatttatc aatagtattg ttactgttgc aaagttaata ccgattttac
     5581 ttgtaatcat atgcatgata attgcattca attttgacac ttttaaaaca ggctttttcg
     5641 gtatgacgtc agagggtgta ttgccattta gttgggcgag cacaatgagc caagttaaaa
     5701 gtacgatgct agtgacagta tgggtgttta tcggtatcga aggtgcagta attttttcta
     5761 gtagagctaa aaataaaaaa gatgtaggta gtgccacggt tataggactt atatcagttt
     5821 taattatcta tttcttatta actgtattag ctcaaggcgt gattttgcaa aatcatattc
     5881 ctcaattaga ttcgccaagt atggcacagg tgcttgcaac tattgtaggt gcttggggat
     5941 ctacacttgt aaatattggt ttaattattt cggtactagg tgcatggtta ggatggacac
     6001 tgcttgctgg tgaattacct ttcattgttg caaaagatgg attatttcca aaatggtttg
     6061 ctaaagaaaa taaaaatgga gcacctgtaa atgcactgct tattaccaat atattagtac
     6121 aattattttt gataagtatg ctatttacac agagtgcgta tcaatttgca ttttcactag
     6181 catcaagtgc tattttatac ccttacatgt tcagtgcatt ttaccaagtt aaatacactt
     6241 tagagcatcg acagcaagca actactaaac aatggacgat tggtatcata gcctcaattt
     6301 atgctatatg gcttatatat gcagcaggta tcaattactt attattgacg atgttacttt
     6361 atattccagc tcttcttgtt tattcaatcg ttcaaaagaa taatcagaca cgtttgatta
     6421 aatcagacta tattcttttt atgattatta tcgtacttgc agttatcggg ttaattaagt
     6481 tattgatggg aacgataaat gttttttaaa aggagcgaca aaaatatgaa agagaaaatt
     6541 gtcattgcat taggcggtaa tgcgatacag acaaaagaag caacagctga agcacaacaa
     6601 acagctatta gacgtgcgat gcaaaacctt aaacctttat ttgattcacc agcgcgtatt
     6661 gtcatttcac atggtaatgg cccacaaatt ggaagtttat taatccaaca agctaaatcg
     6721 aacagtgaca caacgccggc aatgccattg gatacttgtg gtgcaatgtc acagggtatg
     6781 ataggctatt ggttggaaac tgaaatcaat cgcattttaa ctgaaatgaa tagtgataga
     6841 actgtaggca caatcgttac acgtgtggaa gtagataaag atgatccacg atttgataac
     6901 ccaactaaac caattggtcc tttttatacg aaagaagaag ttgaagaatt acaaaaagaa
     6961 cagccagact cagtatttaa agaagatgca ggacgtggtt atagaaaagt agttgcgtca
     7021 ccactacctc aatctatact agaacaccag ttaattcgaa ctttagcaga cggtaaaaat
     7081 attgtcattg catgcggtgg tggcggtatt ccagttataa aaaaagaaaa tacctatgaa
     7141 ggtgttgaag cggttataga taaagatttt gctagtgaga aattagcaac gctgattgaa
     7201 gcagatacct taatgattct tacgaatgta gaaaatgtat ttattaactt taatgaacct
     7261 aatcaacaac aaatcgatga tattgatgta gcaacactga aaaaatacgc ggcacaaggt
     7321 aagtttgcgg aaggatcgat gttgccaaaa atagaagctg cgatacgatt tgttgaaagt
     7381 ggggaaaaca aaaaagttat cattaccaat ttagagcagg catacgaagc tttgattggt
     7441 aataaaggta cacacattca catgtagcac tttatcacgc gacaaaacat taaatatgtt
     7501 tctccgttga ttcaaatgaa aaagttgtct gctgacactt tgcaaggttt gaaggagttt
     7561 aacttatgac agaaaacttt attttgggta gaaataataa attagaacat gaactaaagg
     7621 cattagcaga ttacattaat atcccatata gtatattaca accatatcaa agtgaatgtt
     7681 ttgtcagaca ttatacgaaa ggccaagtta tttatttttc gccacaagaa agtagcaata
     7741 tttacttttt aattgaaggt aacattatta gagaacatta caatcaaaat ggagatgtat
     7801 atcgttattt taataaagag caagtattat ttccaatcag taacttattt catccgaaag
     7861 aggttaacga attgtgtaca gcattaaccg attgtacagt tcttggattg cctagagaat
     7921 tgatggcctt tttgtgcaaa gctaatgatg atatattttt gacacttttt gcattaataa
     7981 atgataatga gcagcaacac atgaactata acatggcatt aacaagtaaa tttgctaaag
     8041 atcgaattat caaattgtta tgccatctat gtcagacagt aggatacgat caagatgaat
     8101 tttatgaaat caaacagttt ttaactattc aactcatgag tgatatggct gggatttccc
     8161 gggaaacagc tggtcatatt attcatgaac ttaaagatga aaaacttgtt gttaaagatc
     8221 ataaaaattg gttagtaagc aaacatttat tcaatgatgt atgtgtttaa tatacaatgt
     8281 aaaatgaata agttgaacat gaggtctaac gtacatttat acgttaggcc ttttttgcta
     8341 gcatgatgag aaatttaaaa tgttagttaa atttgattgt tgaaattaca gtaaaattta
     8401 aggtgatgaa aaatttagaa cttctaagtt tttgaaaagt aaaacatttg caatagtgta
     8461 aaaatagtat attgattttt gctagttaac agaaaatttt aagttatata aataggaaga
     8521 aaacaaattt tacgtaattt ttttcgaaaa gcaattgata taattcttat ttcattatac
     8581 aatttagact aatctagaaa ttgaaatgga gtaatatttt tgaaaaaaag aattgattat
     8641 ttgtcgaata agcagaataa gtattcgatt agacgtttta cagtaggtac cacatcagta
     8701 atagtagggg caactatact atttgggata ggcaatcatc aagcacaagc ttcagaacaa
     8761 tcgaacgata caacgcaatc ttcgaaaaat aatgcaagtg cagattccga aaaaaataat
     8821 atgatagaaa cacctcaatt aaatacaacg gctaatgata catctgatat tagtgcaaac
     8881 acaaacagtg cgaatgtaga tagcacagca aaaccaatgt ctacacaaac gagcaatacc
     8941 actacaacag agccagcttc aacaaatgaa acacctcaac cgacggcaat taaagatcaa
     9001 gcaactgctg caaaaatgca agatcaaact gttcctcaag aagcaaattc tcaagtagat
     9061 aataaaacaa cgaatgatgc taatagcata gcaacaaaca gtgaacttaa aaatcctcaa
     9121 acattagatt taccacaatc atcaccacaa acgatttcca atgcgcaagg aactagtaaa
     9181 ccaagtgtta gaacgagagc tgtacgtagt cttgcagttg ctgaacctgt agtaaatgct
     9241 gctgatgcta aaggtacaaa tgtaaatgat aaagttacgg caagtaatct acagttgcaa
     9301 aagactacat ttgaccctaa ccaaagtgga aatacattta tggcggcaaa ttttacagtg
     9361 acagataaag tgaaatcagg ggattatttt acagcgaagt taccagatag tttaactggt
     9421 aatggagacg tggattactc taattcaaat aatacgatgc caattgcaga tattaaaagt
     9481 acgaatggcg atgttgtagc taaagcaaca tatgatatct tgactaagac gtatacattt
     9541 gtctttacag attatgtaaa tgataaagaa aatattaacg ggcaattttc attaccttta
     9601 tttacagacc gagcaaaggc acctaaatca ggaacatatg atgcaaatat taatattgcg
     9661 gatgaaatgt ttaataataa aattacttat aactatagtt cgccaattgc aggaattgat
     9721 aagccaaatg gcgcgaacat ttcttctcaa attattggtg tagatacagc ttcaggtcaa
     9781 aacacataca agcaaacggt atttgttaac cctaagcaac gagttttagg taatacgtgg
     9841 gtgtatatta aaggttacca agataaaatc gaagaaagta gcggtaaagt aagtgctaca
     9901 gatacaaaac tgagaatttt tgaagtgaat gatacatcta aattatcaga tagctactat
     9961 gcagacccaa atgactctaa ccttaaagaa gtaactgatc aatttaagga taaaatcact
    10021 tataaatacc aaaacgtagc aagtattaat tttggtgata taaataaaac gtatgtcgtt
    10081 ttagttgaag gtcactatga taatactgga aaaaacttga aaacacaggt tattcaagaa
    10141 aatattgacc cagcgacagg taaagactac agtattttcg gatggaataa tgagaatgtt
    10201 gtacgttatg gtggtggaag tgctgatggt gattcagcag taaatccgaa agatccaact
    10261 ccagggccac cggttgaccc agagccagaa ccggagccaa cgccggatcc agaaccaagt
    10321 ccagatccag aaccggaacc aacgccagat ccagaaccaa gtccagaccc ggatccggaa
    10381 ccaacgccag atccagagcc aagcccagaa ccagatccgg attcggattc ggacagtgac
    10441 tcaggctcag acagcgactc aggttcagac agtgactcgg actcagacag cgactcagat
    10501 tcagatagtg actcagattc agatagtgac tcagactcag atagtgactc agactcagat
    10561 agtgactcag attca
//
LOCUS       DALMNS010000095        10449 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.095, whole genome shotgun sequence.
ACCESSION   DALMNS010000095 DALMNS010000000
VERSION     DALMNS010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10449)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10449)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10449
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.095"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            132..2411
                     /gene="secDF"
                     /locus_tag="O6Y56_002124"
     CDS             132..2411
                     /gene="secDF"
                     /locus_tag="O6Y56_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500252.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecDF"
                     /protein_id="HDB5575370.1"
                     /translation="MKKSSRIIAFLLLVVLLFAGMAATYKSVIKNVNLGLDLQGGFEV
                     LYQVDPLNKGDKIDKKALQSTAQTLENRVNVLGVSEPKIQVEEPNRIRVQLAGVTDQN
                     EARKILSSQANLTIRDAEDKVKLSGSDIKQGSAKQEFKQETNQPTVTFKVKDKNKFKK
                     VTEEISKKRDNVMVVWLDFKKGDSYKKEAQKKNPKFISAASVDQPINSDSVEISGGFK
                     GQEGVKKAKQIAELLNAGSLPVDLKEIYSNSVGAQFGQDALDKTVFASFIGVALIYLF
                     MLGFYRLPGLVAIIALTTYIYLTLVAFNFISGVLTLPGLAALVLGVGMAVDANIIMYE
                     RIKDELRIGRTIKQAFSKANKSSFLTIFDSNLTTVIAAAVLFFFGESSVKGFATMLLL
                     GILMIFVTAVFLSRFLLSLLVSSNIFKNQFWLFGVKKNKRHDINEGVDVHDLKTSFEK
                     WNFVKLAKPLIGVSILIVVVGLVILYIFKLNLGIDFSSGTRVDFQSKQAITQQKVEQV
                     VKDSGLKADQIQINGKDNKVATVQFKDDLTRAQDNKLSDNIKSKFGDTPQINTVSPII
                     GQELAKNAMLALIYASIGIIIYVSLRFEWRMGLSSVLALLHDVFIIVAIFSLFRIEVD
                     LTFIAAVLTIVGYSINDTIVTFDRVRENLQKVKVITTTEQIDDIVNRSIRQTMTRSIN
                     TVLTVIVVVVAILFFGAPTIFNFTLALFIGLISGVFSSIFIAVPLWGMMKKRQLKKSP
                     KQKLVVYKEKKSNDEKILV"
     gene            2614..4887
                     /gene="recJ"
                     /locus_tag="O6Y56_002125"
     CDS             2614..4887
                     /gene="recJ"
                     /locus_tag="O6Y56_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDB5575371.1"
                     /translation="MIKPKYKWKLNKPTEYISDELTSKLKLTPIVKKILESKSIIDEQ
                     AIESIISDTDINHDSLQLSDMTKTIERIKRAIANDEKILVYGDYDADGVTSTTILVTT
                     LQLLGAQVGWHIPNRFTEGYGPNELAFRNAHDEGITLIITVDNGIQGHNEIKMVQDLG
                     VDVIVTDHHEIGSTLPEAYAIVHPMHPSFNYPFQQLCGAGVAYKLAQALIENVPDYFK
                     ALVAIGTIADLVSLTDENRSLVKQGLKVLNDQCPTSVKALLKEAGYNDNIDEETIGFI
                     IGPRLNAVGRLDDASLACELLMTDDEEEAAFLAEQVEHFNRERKDIVATITEEAMAMA
                     EMKVKNGDLFLLLAKENWHEGVLGIVASKIVETFALPTLILNIDREQNHAKGSARSID
                     QVSMFEILSAHQELIAKFGGHHMAAGMTMDIDNIESLAEGLNKWMKELSKTTSLDPVK
                     PVDVLLTENDITIKNIRDMNRLRPFGTDFSRPIFEMDDLSVSSVKAIGQQKNHLKLTL
                     GESNIAALFWQNGHLEPELQDEQPINILGSVQINEWNGNQSPQLIIQDIAMNEQQILD
                     YRSKRKSLPFTENDENIVVLIHPKSDKVNANEYYYGEEIKQQTDKVVLRDLPTSIEDL
                     SNSLQQLQFSQLYIVLQHNHSIYFDGIPNMDVFKKCYKALITKQETNIQKEGMLLCQH
                     LSVKPDTLKFMLKVFLDLNFVTQEDGLIRINQQPDKRSIDSSKVYQLRQQRMDVEKQL
                     LYQDFSEIKNWIKSQLS"
     gene            4909..5427
                     /locus_tag="O6Y56_002126"
     CDS             4909..5427
                     /locus_tag="O6Y56_002126"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009559512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDB5575372.1"
                     /translation="MDLKQYVSEVQDWPKPGVSFKDITTIMDNGEAYGYATNKIVEYA
                     KDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLT
                     MHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIK
                     DYDVMSLISYDE"
     gene            5854..8043
                     /locus_tag="O6Y56_002127"
     CDS             5854..8043
                     /locus_tag="O6Y56_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HDB5575373.1"
                     /translation="MNNEYPYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFR
                     KNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIV
                     DGVTKLKKVKYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQ
                     IRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI
                     ETAIDRIRTEMDRMNIEGDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVNSIN
                     DCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGPNGDPLEIQIRTFDMHE
                     IAEHGVAAHWAYKEGKKVSEKDQTYQNKLNWLKELAEADHTSSDAQEFMETLKYDLQS
                     DKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGDIV
                     EIRTSKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQDRSSNIEKGRMMVEAEIKEQGFR
                     VEDILTEKNIQVVNEKYNFANEDDLFAAVGFGGVTSLQIVNKLTERQRILDKQRALNE
                     AQEVTKSLPIKDNIITDSGVYVEGLENVLIKLSKCCNPIPGDDIVGYITKGHGIKVHR
                     TDCPNIKNETERLINVEWVKSKDATQKYQVDLEVTAYDRNGLLNEVLQAVSSTAGNLI
                     KVSGRSDIDKNAIINISVMVKNVNDVYRVVEKIKQLGDVYTVTRVWN"
     gene            8055..8507
                     /locus_tag="O6Y56_002128"
     CDS             8055..8507
                     /locus_tag="O6Y56_002128"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HDB5575374.1"
                     /translation="MKVVVQRVKEASVTNDTLNNQIKKGYCLLVGIGQDSTEQDADVI
                     AKKIANARLFEDDNNKLNFNIQQMNGEILSVSQFTLYADVKKGNRPGFSNSKNPDQAV
                     KIYEYFNDALRAYGLTVKTGEFGTHMNVNINNDGPVTIIYESQDGKIQ"
     gene            8504..9379
                     /locus_tag="O6Y56_002129"
     CDS             8504..9379
                     /locus_tag="O6Y56_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDB5575375.1"
                     /translation="MKKIEAWLSKKGLKNKRTLIVVIAFVLFIIFLFLLLNSNSEDSG
                     NITITENAELRTGPNAAYPVIYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGWIAGWHT
                     NLDIVADNTKEKNPLQGKTIVLDPGHGGSDQGASSYTKYKSLEKDYTLKTAKELQRTL
                     EKEDATVKMTRTDDTYVSLENRDIKGDAYLSIHNDALESSNANGMTVYWYHDNQRALA
                     DTLDATIQKKGLLSNRGSRQENYQVLRQTKVPAVLLELGYISNPTDETMIKDQLHRQI
                     LEQAIVDGLKIYFSA"
     gene            9840..>10449
                     /locus_tag="O6Y56_002130"
     CDS             9840..>10449
                     /locus_tag="O6Y56_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDB5575376.1"
                     /translation="MIKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFE
                     STDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPI
                     KLYYNGPMFRYERKQKGRYRQFKQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLK
                     LVINSVGDIASRKEYNEALVKHFEPVIHEFCSDCQSRLHTNPM"
BASE COUNT         3859 a         1407 c         1986 g         3197 t
ORIGIN      
        1 gactattttt actccctgct ctagtatgtt aatatgtata aggctaataa attttgtaag
       61 aaagatttaa cttgcgttat aaaatagtat tcaagtattc taaatacata cgtaaataat
      121 gaggtgttca tgtgaagaaa agtagtagaa taattgcgtt cttgctttta gtcgtattgt
      181 tgtttgccgg aatggctgca acttataaaa gtgttataaa gaatgtcaat ttaggacttg
      241 atttgcaagg tggatttgag gtgctttatc aagtcgaccc tttaaataaa ggcgacaaaa
      301 tagataaaaa agccttacaa tcaacagcgc aaacattaga aaatcgtgtt aacgttttag
      361 gtgtttccga acctaaaatt caagttgaag aacctaatag aattagagtt caacttgctg
      421 gtgtaacaga ccagaatgaa gcacgtaaaa ttttatcttc tcaagctaat ttaacaattc
      481 gcgatgcaga agataaagta aaattaagcg gttctgatat taaacaggga tctgccaaac
      541 aagaatttaa acaggaaaca aaccagccta cagttacttt taaagtaaaa gacaaaaaca
      601 aatttaaaaa agtaacggaa gaaatctcta agaaacgtga taatgtcatg gttgtttggt
      661 tagatttcaa aaaaggtgac agctataaaa aagaagcaca aaagaaaaac cctaaattta
      721 tttctgcagc aagtgttgat caaccaatca attctgatag cgtagaaatc tctggtggat
      781 ttaaaggaca agaaggcgtt aaaaaagcaa aacaaatcgc cgaattgtta aatgcaggtt
      841 ctttaccagt tgacttgaaa gaaatttatt caaactcagt aggtgcccaa tttggtcaag
      901 atgcattaga taaaactgtg tttgcatcgt ttattggtgt agcattaatt tatttattca
      961 tgcttggatt ctaccgatta cctggtttag tagcgattat tgcattgaca acttatatct
     1021 atctaacgtt agtagcattt aatttcattt ccggggttct aacattacca ggattagcgg
     1081 cgttggtatt aggtgtaggt atggctgtag atgccaatat tatcatgtat gagcgtataa
     1141 aggatgaact tcgaataggt agaacgataa agcaagcatt ttctaaagca aacaaaagtt
     1201 cgttcttaac aatttttgat tctaacttaa caacagttat cgccgcagca gtattattct
     1261 tcttcggtga aagttcagtt aaaggtttcg cgacaatgtt attattaggt attctaatga
     1321 tctttgttac agccgtgttc ttatcaagat tcttattatc attacttgtt tcatcaaata
     1381 tattcaaaaa tcaattttgg ttatttggtg ttaaaaagaa taaacgacat gatattaatg
     1441 aaggtgtaga tgttcatgac cttaaaactt cattcgagaa atggaatttt gttaaattag
     1501 ctaagccatt aattggagta agtattttaa ttgtagttgt cggtttagtt attctttata
     1561 tcttcaagtt aaacctagga attgatttct caagtggtac acgtgtagat ttccaatcta
     1621 aacaagcaat tactcaacaa aaggttgagc aagttgtaaa agatagtgga cttaaagcag
     1681 atcaaattca aatcaatggt aaagataata aagtagcaac tgttcaattt aaagacgatt
     1741 taacgcgtgc tcaagataat aaattgagtg ataatattaa atcgaaattc ggtgacacac
     1801 ctcaaattaa cactgtatca ccaattattg gacaggaatt agcaaaaaat gcaatgcttg
     1861 cattaatcta tgcatcgata ggtatcatca tctatgtatc attacgattt gaatggcgca
     1921 tgggtctttc atctgtattg gcattattac atgatgtatt tattatagta gcgattttca
     1981 gtttatttag aattgaagta gatttaacat ttatcgccgc tgtattaaca attgtcggtt
     2041 attcaattaa tgatacaatc gtaacgtttg accgtgtacg tgaaaactta caaaaggtta
     2101 aagtgattac gacaacagaa caaattgatg atatcgttaa tagatcaatt agacagacaa
     2161 tgacacgttc aattaataca gtattaacag ttattgtagt agtagttgct atactattct
     2221 tcggtgctcc tacgatattc aactttactt tagcattatt tatcggattg atttctggtg
     2281 tattctcttc aatcttcatt gccgttccgc tatggggaat gatgaaaaaa cgtcagttga
     2341 aaaaatcgcc gaaacagaaa ttagttgtat ataaagaaaa gaaatcgaac gatgaaaaga
     2401 ttttagttta aaatgaatta agcggtatgt gaaacaataa agagttcaca taccgctttt
     2461 tactttgttt aaatttaaca aaatatatat aaataagttc ccgcattcat ttttaaaaaa
     2521 tggtataatt aaagtcttga ttatttagat aagtgctttt tatttaaagt aattttagat
     2581 ataatgtctt ttggaaatga ggcgtaaata tatatgatta aaccgaagta taagtggaaa
     2641 ttaaataaac caactgaata cataagtgat gaattaacat caaaattaaa gttaacgcca
     2701 atcgtaaaaa aaatattaga aagtaaatcg attattgatg aacaagcaat tgaatccatc
     2761 atttcagata cagatatcaa tcatgattca ctgcaattga gcgatatgac taagactatt
     2821 gaaagaatta aaagagcaat agcgaatgat gagaaaatcc tagtttatgg tgattacgat
     2881 gccgacggtg ttacctcaac tacaatttta gtgacaacat tacaactttt aggtgcacaa
     2941 gtaggatggc atattcctaa ccgctttacc gaaggatatg gaccaaacga actagcattt
     3001 agaaatgctc atgatgaagg cataacatta atcataactg ttgataatgg catacaaggt
     3061 cataatgaaa ttaagatggt tcaagattta ggagttgatg tcattgtaac tgatcatcat
     3121 gaaattggta gtacattacc agaagcatat gcaatcgtac atccaatgca tccatcgttt
     3181 aattatccgt tccaacaatt gtgtggtgca ggtgttgcgt acaaattagc acaagcattg
     3241 attgaaaatg tacctgatta ttttaaagca ttagttgcga taggtaccat tgcggattta
     3301 gtatccttaa ctgatgaaaa tcgatcatta gtgaaacaag gattaaaagt cttaaatgat
     3361 caatgtccga cctctgttaa agcattgcta aaagaagcgg gatacaatga caatattgat
     3421 gaagaaacaa ttggttttat tattggacct agacttaatg ctgtaggtcg tttagatgac
     3481 gcatcattag cttgcgaatt gttgatgact gacgacgaag aagaagctgc atttttagca
     3541 gaacaagttg aacattttaa ccgtgaaaga aaagatattg tagcaactat cacagaagaa
     3601 gcaatggcaa tggcagaaat gaaagttaaa aatggagatt tatttttact tttagcaaaa
     3661 gaaaattggc atgaaggtgt cttaggtatt gttgcttcga aaattgtcga aacatttgct
     3721 ttgccaacat taattttaaa tattgatagg gagcaaaatc atgcaaaagg ttccgccaga
     3781 tcaattgatc aagtgtcgat gtttgaaata ctatcagcac accaagagtt aatcgctaaa
     3841 tttggcggcc atcatatggc agcaggtatg acgatggata ttgataatat agaatcgtta
     3901 gctgaaggtt taaataaatg gatgaaagaa ttatctaaaa caacttcgtt agatcccgta
     3961 aagccggtag atgtattatt aacagaaaat gatataacga ttaaaaatat tcgtgatatg
     4021 aatcgtttaa gacccttcgg aacagatttt tctagaccta tttttgaaat ggatgattta
     4081 tcagtttctt cagttaaggc gataggtcaa caaaaaaatc atctaaaatt gacgcttggt
     4141 gaaagtaata tcgccgcact attttggcaa aatggacact tagaacctga gttgcaagat
     4201 gaacagccaa ttaatatatt aggatctgtt caaatcaacg aatggaatgg taatcaatca
     4261 ccgcaattaa ttattcaaga tattgcgatg aatgaacagc aaatattaga ttatagaagt
     4321 aaacgaaaaa gtttaccttt tacagaaaat gatgaaaata ttgtcgtgct tattcatcct
     4381 aaaagtgata aagtaaatgc gaatgaatat tattatggtg aagaaattaa acaacaaact
     4441 gataaagtag tattaagaga tttacctacg tcgattgaag atttgtctaa ttccctgcaa
     4501 caactgcaat tttctcaact ttatatagtt ttgcaacata atcattcgat ttacttcgat
     4561 ggtataccta atatggatgt ttttaaaaag tgttataaag cattaataac taaacaagaa
     4621 acaaatatcc agaaagaggg tatgttattg tgtcaacatt taagtgtgaa accagataca
     4681 cttaaattca tgttgaaagt tttcttagac ttaaattttg taacacaaga agatggttta
     4741 attcgaatca atcaacaacc tgataaaaga tcgattgatt ccagcaaagt gtatcaatta
     4801 agacaacaac gtatggatgt tgaaaagcaa ttattatatc aagatttttc agaaataaaa
     4861 aattggataa agtcacaatt gtcgtgagca atttaggagg aaatattaat ggatttaaag
     4921 caatacgtat cagaagttca agattggccg aaaccaggtg ttagtttcaa ggatattact
     4981 acaattatgg ataatggtga agcatatggc tatgcaacaa ataaaattgt agaatacgca
     5041 aaagacagag atgttgatat cgttgtagga cctgaagcgc gtggctttat cattggctgt
     5101 cctgtagctt attcaatggg gattggcttt gcacctgtta gaaaagaagg gaaattacct
     5161 cgtgaagtca ttcgttatga gtatgaccta gaatatggta caaatgtttt aacaatgcac
     5221 aaagatgcaa ttaaaccagg tcaacgtgtg ttaattacag atgatttatt agctactggt
     5281 ggtacgattg aagcagcaat aaaattagtc gaaaaattag gcggtatcgt agtaggtatt
     5341 gcatttataa ttgaattgaa atatttaaat ggtattgaaa aaattaaaga ttacgatgtt
     5401 atgagtttaa tctcttacga cgaataaaaa ataatataat tttatcaaat gaaatccttc
     5461 atcaaatgta taagaacgaa tgacttaatt aaaaaagttg tttaagtttt cttaactgag
     5521 atgttaggat tttttattta ctgaaaatgt tagatgattg agcattatac cttaataaca
     5581 tcgtttattt atttcataaa ttgtagtatc atagaactaa tatttaaaaa atgaaacagt
     5641 agatttaggt cgaatttttg taaaagtttt aaaagtagga atagtataca aattaaactc
     5701 gctcaagtaa aattaatatt acgattaatg acgacaggat aaatatttat cgtcgacgga
     5761 cgtatgattg gtgtgggaca aatactattc aacaagagta cctaaatcat tgtttaaggc
     5821 gaagtaataa atatgaatgg ggtgtatcat ataatgaaca acgaatatcc atatagtgca
     5881 gacgaagttc ttcacaaagc aaaatcatat ttgtcagcag atgaatatga gtatgtttta
     5941 aaaagctatc atattgctta tgaagcacat aaaggtcagt tccgaaaaaa cggattacca
     6001 tacattatgc atcctataca agttgcaggt attttaacag aaatgcgatt agacggacca
     6061 acgattgtcg caggtttttt gcatgatgta attgaagata caccgtatac atttgaagat
     6121 gtaaaagaaa tgttcaatga agaagttgct cgaattgttg atggtgtgac gaagcttaaa
     6181 aaagtaaaat accgctcaaa agaagaacag caagctgaaa atcatcgcaa gttatttatt
     6241 gcgattgcca aagatgtacg cgtaattttg gtgaaattag cagacagatt acataatatg
     6301 cgtaccttga aagccatgcc gcgcgaaaaa caaattagaa tttctcgaga aacattagaa
     6361 atttatgcac ctttagcaca tcgtcttggt attaatacaa tcaaatggga actagaagat
     6421 acggctcttc gttatattga taatgtacaa tattttagaa tagtcaattt aatgaagaag
     6481 aaacgtagtg aacgtgaagc gtatatcgaa acagctattg atagaatacg tactgaaatg
     6541 gaccgaatga atattgaagg cgatataaat ggtagaccta aacatattta cagtatttat
     6601 cggaaaatga tgaagcagaa aaagcaattt gatcaaattt ttgatttgtt ggcgatacgt
     6661 gttattgtca attctattaa tgattgttat gcgatacttg ggttggtgca tacgttatgg
     6721 aaaccgatgc caggacgttt taaagattat attgcaatgc ctaaacaaaa tttgtatcag
     6781 tcattgcata ctacagtagt aggtccaaat ggagacccgc tcgaaatcca aatacgaacg
     6841 tttgatatgc acgaaattgc tgaacatggt gttgcagcac actgggctta caaagaaggt
     6901 aaaaaagtaa gtgaaaaaga tcaaacttat caaaataagt taaattggtt aaaagaatta
     6961 gctgaagcgg atcatacatc gtctgacgct caagaattta tggaaacctt aaaatatgac
     7021 ttacagagtg acaaagtata cgcatttacc ccagcgagtg atgttattga gttgccatat
     7081 ggtgctgtgc cgattgattt tgcttatgcg attcacagtg aagtaggtaa taagatgatt
     7141 ggtgccaagg tgaatggcaa aattgtacca attgactatg ttttacaaac aggcgatatt
     7201 gttgaaatac gtactagtaa acattcatat ggaccaagtc gtgattggtt gaaaattgtt
     7261 aaatcgtcta gtgccaaagg taaaattaaa agtttcttca aaaaacaaga tcgttcatct
     7321 aatattgaaa aaggccgaat gatggttgaa gctgaaataa aagagcaagg atttagagtc
     7381 gaagatattt tgacagagaa aaatattcag gttgttaatg aaaaatataa ctttgcaaat
     7441 gaagatgatt tattcgcagc tgtaggattt ggcggcgtga catccttgca gattgttaat
     7501 aaattaactg agagacaacg tattttagat aaacaacgtg ctttaaatga agcacaagaa
     7561 gttacgaaat cattgcctat taaagacaac atcattactg atagtggtgt ctatgtagaa
     7621 ggtttagaaa atgtgcttat caagttgtca aaatgttgta atcctatacc aggtgatgat
     7681 attgtaggtt atatcaccaa aggtcacggt attaaagtac atcgcactga ttgcccaaat
     7741 attaagaacg aaactgaacg actaattaat gttgaatggg taaaatcaaa agacgcaact
     7801 caaaaatacc aggttgattt agaggtaact gcgtatgacc gaaatggctt gttgaatgaa
     7861 gtactacaag ctgttagctc gacagccggc aatttaatta aagtttcagg acgttcagat
     7921 attgataaaa atgcaataat aaatattagt gtcatggtga aaaacgtgaa tgatgtttat
     7981 cgtgtggtag aaaagatcaa acaacttggt gatgtttata cagtaacaag agtttggaac
     8041 tagaggtgca aaatatgaaa gtagttgtac aaagagttaa agaagcatcg gtgacgaatg
     8101 atacattaaa taatcaaatc aaaaaaggat attgtttatt agtcggtatc ggtcaggact
     8161 ctacagagca agatgcagat gtaattgcaa agaaaattgc taatgcaaga ttatttgaag
     8221 atgacaataa taaattaaac tttaatatcc aacaaatgaa tggtgaaata ctatcagttt
     8281 cacaatttac tctctatgca gatgtaaaaa aaggtaaccg tccaggtttc tcaaattcta
     8341 aaaatcctga tcaagcagta aaaatatatg agtattttaa tgatgcgcta cgagcgtatg
     8401 gtcttactgt gaaaacaggt gaatttggaa cacacatgaa tgttaacata aataatgatg
     8461 gtccagtcac tattatttat gaaagtcagg acggcaaaat tcaatgaaaa aaatagaggc
     8521 atggttatct aaaaagggtc ttaaaaataa acgtactcta atagtagtga ttgcctttgt
     8581 cttatttatc atctttttat ttttattgct gaatagcaat agtgaagata gtgggaacat
     8641 tacgataact gaaaatgctg aattacgtac aggtccaaac gctgcgtatc cagtcattta
     8701 caaagttgag aaaggtgacc attttaaaaa gattggtaaa gtaggtaaat ggattgaagt
     8761 tgaagataca tccagtaatg aaaaaggttg gatagctgga tggcacacaa atttagatat
     8821 tgtcgcggat aatacaaagg agaaaaatcc tttgcaaggt aaaacaatag tgcttgatcc
     8881 tggtcatgga ggtagtgacc agggtgcttc aagctatact aaatataaaa gcttagaaaa
     8941 agattatacg ttgaaaacag caaaagaatt gcagcgcact ttagaaaaag aagacgcaac
     9001 tgttaagatg acaagaacag acgatacata tgtttcacta gaaaatcgtg atatcaaagg
     9061 cgatgcctat ttgagtatac ataatgatgc attagaatca tctaatgcaa atggaatgac
     9121 agtttattgg tatcatgata atcaaagagc tttagcagat acgttagacg ctacgattca
     9181 gaagaaaggt ctactttcta atcgcggttc aagacaagaa aattatcaag tgttaagaca
     9241 aacaaaagtt cctgctgttt tattagaatt aggttatatt agtaacccaa ctgatgaaac
     9301 gatgattaaa gatcaattac atagacaaat tttagaacaa gcaattgttg atggccttaa
     9361 aatttatttt tctgcgtagg gcttgcaaaa atatgtgaaa gtagttatca ttgatattga
     9421 attttataac taaaaccgtt tgtattcttg aaatggtaaa tgaaataggt agcaatctaa
     9481 ttaagattgt gtaggaatat aatccataga ctgaaagatt atgctgagta gtttatatac
     9541 attgaacaca agaagaggtg ctttatgaaa agtaaagccg ttaaacgtac gttaaacgtt
     9601 ttgagtgggt ttattaaatg cacgcttata aaaagtaatg atgattacaa ttaggcatgt
     9661 tttttaaacc aatgagggtg gcaacacgga tattcgtccc ttgtgcagtt tcaggctgtg
     9721 caagggcttt ttcttttgct tttaaaatta tgatttatcg tgcaaagtta agtggtcgta
     9781 tatagtttta gttttaaaaa ggtaattaaa taaaatagtt tgccgaggga gatgtcaaaa
     9841 tgattaaaat acctagaggg acgcaggata ttttacctga agattcaaag aaatggcgtt
     9901 acattgaaaa tcaattagat gaattaatga cattttataa ttataaagaa ataagaacac
     9961 caatttttga aagtacagat ctttttgcaa gaggtgttgg tgattcaacc gatgtcgtac
    10021 aaaaagaaat gtatacattt aaagataaag gcgacagaag tattacatta agacctgagg
    10081 gaacagctgc agttgtgcgt tcatatattg aacataaaat gcaaggtaat ccaaaccaac
    10141 caattaaact ttattacaat ggaccgatgt ttagatatga acgtaagcaa aaagggcgct
    10201 atcgtcaatt taaacaattt ggtgtagaag ctattggtgc tgaaaatcct agcgtagatg
    10261 cagaagtatt agctatggtt atgcatattt atcaatcatt tggattaaaa catttaaagc
    10321 ttgttattaa tagtgtaggg gatattgcgt ctcgaaaaga atataacgaa gcgttagtga
    10381 aacactttga accagtaatt catgaatttt gttcagattg tcaatcacgt ttgcatacaa
    10441 atccgatgc
//
LOCUS       DALMNS010000096        10390 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.096, whole genome shotgun sequence.
ACCESSION   DALMNS010000096 DALMNS010000000
VERSION     DALMNS010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10390)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10390)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10390
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.096"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(157..765)
                     /locus_tag="O6Y56_002131"
     CDS             complement(157..765)
                     /locus_tag="O6Y56_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HDB5575377.1"
                     /translation="MDFVNNDTRQIAKNLLGVKVIYQDTTQTYTGYIVETEAYLGLND
                     RAAHGYGGKITPKVTSLYKRGGTIYAHVMHTHLLINFVTKSEGIPEGVLIRAIEPEDG
                     LSAMFRNRGKKGYEVTNGPGKWTKAFNIPRAIDGATLNDCRLSIDTKNRKYPKDIIAS
                     PRIGIPNKGDWTHKSLRYTVKGNPFVSRMRKSDCMFPEDTWK"
     gene            1164..1811
                     /locus_tag="O6Y56_002132"
     CDS             1164..1811
                     /locus_tag="O6Y56_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000436833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HDB5575378.1"
                     /translation="MEQLPQVGFMKSFVLFWKNYVNFKGRSRRSEYWYMMLWHLIFIL
                     PAFFVFFMGAVFVGIGDEIDAKVLSMFGVMILILTVIYMLLYSLATFIPNLALSVRRF
                     HDISRTMVLPIIMCAFSIVFSIVVQFIESYYDNDFMFMPIGIVILLVLLYLIYFGLTV
                     TMIVFLCFDSKPANKYGESPKYPSSIKNQPVTSETPEKAGTSETPKTPEETDNQL"
     gene            2042..2941
                     /locus_tag="O6Y56_002133"
     CDS             2042..2941
                     /locus_tag="O6Y56_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5575379.1"
                     /translation="MGLVIEHVTKRFGKMTAVNDMSLELESGKMLGFLGRNGAGKTTT
                     FRMILGLSEPTEGHITYNGKKLDKTMYNRIGYLPEERGLHGKLTVEEELKYLATLKGM
                     SKTEIQQQISYWLERFDITENRKKRIDSLSKGNQQKIQLLASMLHKPELLILDEPFSG
                     LDPVNVELLKEAVKDLNDWGSTIVYSSHRMEHVEELCDDVCILDKGQLVVSGDINHVR
                     ASNGNKKVVIESETTLPDLTHIRGIIHSENMKQGLQLTIENEDVAKDIYQVVAHQGYV
                     KRFQVVEPSLQDIFIEKVGGKDA"
     gene            2934..4166
                     /locus_tag="O6Y56_002134"
     CDS             2934..4166
                     /locus_tag="O6Y56_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5575380.1"
                     /translation="MHKFWATFSLTYIKKIKAKSFVIFMIIIAALMIGLSNIDKIINM
                     FDDGPDKIGVAAPNEQIYKVFKQQSNTFHSDAKFTKVSIEDAEKEVKKHKLDKAYIIK
                     VNQNRTLQGTIISEKRVSHEDSQKVQALLTAIQTNMVAGELNINKEDLQKLQAQSKVD
                     NKVISNDEVDKVSEGQKIFNYALAYGIIFLMFFIVLNYASQIAMEISSEKTSRVIEMI
                     ITSISPIQHIFAKILGVIAVAVTQIILIVLMAVICIFAFDLKDLLQGFNVEMNQLSWQ
                     IIIVGIISSIVGIMAYVLLAAILGSLTSRIEDLNQSLMPMTLLGMIAFYIAIFTINNP
                     DGRLALITSYIPFLAPFQLVVRAQTSGLQIHEVILSSLISIVMVAVLIWIAIKTYKDS
                     VLTFERGLFNSLKRVFKK"
     gene            4150..4335
                     /locus_tag="O6Y56_002135"
     CDS             4150..4335
                     /locus_tag="O6Y56_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575381.1"
                     /translation="MYLKNKIDESDTHLSYKMMMKACYSYFFIFSYRIMSKKVYNMNV
                     KTNFLKWECEVRRNVNK"
     gene            4384..4709
                     /locus_tag="O6Y56_002136"
                     /pseudo
     CDS             4384..4709
                     /locus_tag="O6Y56_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501077.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YnfA family protein"
     gene            4739..5758
                     /locus_tag="O6Y56_002137"
     CDS             4739..5758
                     /locus_tag="O6Y56_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HDB5575382.1"
                     /translation="MIVEVEHQRQGVDLIKIDNDETKIIFTNYGARVVSWKYHDNNIV
                     LGNVVEADEFYHSNPFKFGASIGRYSGRIDNAKFKMKGKEYQLEKNNGEHHLHGGCHG
                     LDNKLFDYEIRNEIAQIKVIFKTVLKSADDHFPGDIDVTITHIYDADHQWSIEYEAVA
                     SEDTLFSPTNHVYFNLNRDNNVVDNHRISSNQLDMYVLDERNIVTGDILDLHEVFEDN
                     KIKLSDIFTSQHAQLSQQMTRFGGLDHPFTVGEHKMYVENHEFMLEVDTDMPHVVFFT
                     FNQPDEWDSPFNIYKPHSGFTLETQFLPNDINLYGEKAPSILKAGEVFNSKTSFRIEE
                     KVEND"
     gene            complement(5994..6647)
                     /locus_tag="O6Y56_002138"
     CDS             complement(5994..6647)
                     /locus_tag="O6Y56_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HDB5575383.1"
                     /translation="MISIHAISTGKIQDLPYSSKRPMRSALDKTKISQTTWLSSTGFT
                     GDEQAYKDHGGPHKAVCGFSKHNYALYQDDLPSLPTHAMFGENLTFDYLDESDVYFGN
                     QYRLGEALIEVSEIREPCWKIQAKYNIPDLVKRMSTSGKTGFYFRVLKQGYVSPNDQL
                     YLIQEAPIEHRLSVQQLNDLYYNDRQNQDMLRYALNNPFLSPTRRDKLQKMYNRTLK"
     gene            6818..7504
                     /locus_tag="O6Y56_002139"
     CDS             6818..7504
                     /locus_tag="O6Y56_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase A"
                     /protein_id="HDB5575384.1"
                     /translation="MKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLI
                     KERGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGG
                     ALFREKVIDEMASRFVVVVDETKMVQYLGETFKLPVEVDKFNWYHILRKIESYADIKV
                     ERRVNEDVAFITDNGNYILDCKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVG
                     TQEGVKILEK"
     gene            complement(7569..8825)
                     /gene="sdpC"
                     /locus_tag="O6Y56_002140"
     CDS             complement(7569..8825)
                     /gene="sdpC"
                     /locus_tag="O6Y56_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000794440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease SdpC"
                     /protein_id="HDB5575385.1"
                     /translation="MKNNKISGFQWAMTIFVFFVITMALSIMLRDFQSIIGVKHFIFE
                     VTDLAPLIAAIICILVFKYKKVQLAGLKFSISLKVIERLLLALILPLIILIIGMYSFN
                     TFADSFILLQSTGLSVPITHILIGHILMAFVVEFGFRSYLQNIVETKMNTFFASIVVG
                     LMYSVFSANTTYGTEFAAYNFLYTFSFSMILGELIRATKGRTIYIATTFHASMTFGLI
                     FLFSEEIGDLFSIKVIAISTAIVAVGYIGLSLIIRGIAYLTTRRNLEELEPNNYLDHV
                     NDDEETNHTEAEKSSSNIKDAEKAGVATASTVGIAKNDTENTVTDEPNIHEGTEKTEP
                     QHHIDNQTESNHDEDHDITSESVESAESVKHAPQSDDLTNDSNEDEIQSLKEPATYKE
                     DRRSSVVIDAEKHIEKTEEQSSDKNI"
     gene            9115..10050
                     /locus_tag="O6Y56_002141"
     CDS             9115..10050
                     /locus_tag="O6Y56_002141"
                     /EC_number="3.5.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formimidoylglutamase"
                     /protein_id="HDB5575386.1"
                     /translation="MYKQGEPNLWTGRLDSETDPKKFRHFQTVTFEDLSKLEKSSRPS
                     GVGILGYAVDKGVALNKGRIGAKEGPDAIKQAFAGLPDLNQCEALVDYGNVYHDHEEL
                     IDTQKEFAMLAAKSIANHRQTFLLGGGHDIAYAQYLATRKVYPTQSIGVINIDAHFDT
                     RAEQQSTSGTSFRQILEEDENTDYLVLGIAQGGNTQSLFDYAKEKKIDYVFADELLSH
                     VSPTIKDMIERFVHEHDVIMFTICMDVIDSAFAPGVSAPAVLGLYPHTVLELAKRIIP
                     SDKVSSVSIAEMNPTYDADNRTAKLVANLVHHFLK"
BASE COUNT         3565 a         1414 c         1962 g         3449 t
ORIGIN      
        1 ttataattaa gaacaagttc aataagagga gatgaatcaa aaaatatgat ggacacaaag
       61 aaaaacaatc aacccatccg tatgttgacg gctgattgat tgacttataa ggagatagat
      121 ttcattttca tgatagtaat caatgaaaga tggcatttat ttccaagtat cttcgggaaa
      181 catacaatct gatttacgca tgcgagacac aaatggatta cctttcactg tgtaacgtaa
      241 agatttatgt gtccaatcac ctttatttgg aataccgatt cgtggactag caataatatc
      301 tttaggatat ttacgattct tagtatcaat agacaatcta cagtcattta acgtagcgcc
      361 atcgatagcc cgtggaatgt taaatgcctt agtccatttt cctgggccat tcgttacctc
      421 gtagcctttc ttacctctgt tacggaacat agcagataaa ccgtcttctg gttcaattgc
      481 gcggataagt acgccttcag gtataccttc agattttgtt acaaaattaa tgagtaaatg
      541 cgtatgcatg acatgtgcat aaattgtacc accacgttta tataatgacg taactttagg
      601 tgttatttta ccgccatagc catgagccgc acgatcattc aaacctaagt atgcttcagt
      661 ttccacgatg tagcctgtat acgtttgagt ggtatcctga taaatcactt tgacacctaa
      721 taagttttta gcaatttgtc ttgtatcatt attaacgaaa tccataatat tctcctcgca
      781 attatatgat taatttaaat aaaaatgaaa aagatatttt tattgtggta aatgtttgat
      841 aaaatagtat tgttaagaat tataaaaatg taaagtatat actttgttat ggaatatttt
      901 atttgcagag attgagtctc ttttgaacgc gaacattgca gtgtgacata tttttagtat
      961 agttaacgaa gcgttgactt tcaaatgagt ctccatatag atgcgtactt gtagcgggtt
     1021 ttcatttaac tagtgatgaa atataaagtt cattttccaa agtgaacgac gattgaaatg
     1081 aagtggcttg ataatgaatc ttgtatatta taacggtaat aataattaaa aatataaata
     1141 tgattaatga aagggagatt acaatggaac aattacctca agtaggtttt atgaaatcat
     1201 tcgtattatt ttggaaaaat tatgtaaatt ttaaggggag atcaagacgt agtgaatatt
     1261 ggtatatgat gttgtggcat ttaatattta tacttcctgc tttcttcgtg ttctttatgg
     1321 gagcagtatt tgtgggtata ggtgatgaaa tagatgctaa agtattatct atgtttggtg
     1381 tgatgatatt aatacttaca gttatatata tgcttcttta ttctttagca acctttattc
     1441 ccaatttggc attaagcgtc cgaagattcc acgatatatc aagaacaatg gtattgccta
     1501 ttataatgtg tgcatttagt attgtattct ctatagtggt gcagtttatc gaatcatatt
     1561 atgataatga ttttatgttt atgccaattg gaattgttat tttgttagta cttctatatc
     1621 ttatttattt tggacttaca gttacaatga tagtattcct atgctttgac agtaagccgg
     1681 caaataaata tggcgaaagc ccaaaatacc catcttcaat taaaaatcaa ccagtgacat
     1741 ctgaaacacc ggaaaaagcg ggtacatctg aaacaccgaa aacaccggaa gaaacagata
     1801 atcaattgta aggatataaa tatctcggca caatgatgct gggatatttt tttaccaaca
     1861 aggcaataaa ggcatggaaa atggggagtt aacgctcatg atacttaaca tgcaaagaag
     1921 atactattta aatatttcaa tttcagaaat tttaaaaata aattcacttt aaaaatattg
     1981 catttataga gaatagaaat gttatattaa gataaataca tattgtttta ggaggcaaag
     2041 tatgggactt gtaattgaac atgttacgaa acgttttggc aagatgacgg cagtaaatga
     2101 tatgtcatta gagttagaat caggcaaaat gttaggtttt ctaggaagaa atggtgcagg
     2161 taaaacaacg acatttcgta tgattttagg cttaagtgaa ccaacagaag gacacattac
     2221 gtataacggt aaaaaactag ataaaacaat gtacaatcgt attggttatt taccggaaga
     2281 acgcggttta catgggaaat tgacagttga agaagaattg aaatatttgg caactttaaa
     2341 gggaatgtca aaaacagaaa tacaacagca aatatcgtat tggcttgagc gttttgatat
     2401 tactgaaaac cgcaaaaaac gaattgatag tctatcaaaa gggaatcaac aaaaaattca
     2461 gctgttagca agtatgttac ataaaccaga attactaata ttagatgagc ctttcagtgg
     2521 tctagaccca gttaatgttg agttattaaa agaagcagtt aaagacttaa atgattgggg
     2581 cagtacaatc gtttatagtt ctcaccgtat ggagcatgtt gaagaattat gtgatgatgt
     2641 ttgtatttta gataaaggtc aacttgttgt ttctggtgat atcaatcatg tacgtgcatc
     2701 taatggtaac aagaaagttg tcattgagtc agaaacaaca ctaccagatt taacacacat
     2761 tagaggcatc attcatagtg aaaacatgaa gcaaggtctt cagttgacga ttgagaatga
     2821 agacgtagcc aaagatattt atcaagttgt ggcacatcaa ggttatgtta aacgattcca
     2881 agttgtagaa ccatcattac aagatatatt cattgagaag gttggtggca aggatgcata
     2941 agttttgggc gacatttagt ttgacatata tcaaaaaaat taaagctaaa tcatttgtaa
     3001 tttttatgat tattattgct gccttaatga ttggcctatc taacattgat aagattatta
     3061 acatgtttga tgatggtcca gataaaattg gtgtagcagc accgaatgaa caaatatata
     3121 aggttttcaa gcaacagtcg aatacatttc atagtgatgc taagtttact aaagtttcta
     3181 tagaagatgc tgaaaaagaa gtaaaaaaac ataaacttga taaagcttat attatcaagg
     3241 tgaatcaaaa tcgcacgtta caagggacaa tcattagtga gaagcgagta agtcatgaag
     3301 attcacaaaa agtacaagca ctgcttacag ctattcaaac aaatatggta gccggggaat
     3361 taaatatcaa caaagaagac ttacaaaaat tacaagcaca aagtaaagtt gataataagg
     3421 tgatttctaa tgatgaagtc gataaagtat cagaaggaca aaagattttc aactatgctt
     3481 tagcttatgg cattatcttt ctaatgttct ttattgtttt aaattatgca tctcaaatag
     3541 ctatggaaat ttctagtgag aaaacatcgc gtgtcattga aatgattatt acaagtattt
     3601 caccaatcca acatattttt gctaaaattt taggcgttat agcagttgcc gtgactcaga
     3661 ttattttaat tgtattgatg gcagttatat gcatttttgc ctttgactta aaagacttgc
     3721 tacaaggttt taacgtggaa atgaatcaat tgtcttggca aattattatt gtcggaatta
     3781 taagtagtat tgttggaatt atggcgtatg tattacttgc agccattctc ggatcattaa
     3841 catctagaat agaagattta aatcaatctt tgatgccaat gacattactt ggtatgattg
     3901 cattttatat cgcgatattc acgataaata atcctgatgg gcgacttgct ttaatcacaa
     3961 gttatattcc gtttttagcg ccatttcaat tagttgtacg cgctcaaact tcagggcttc
     4021 aaatacatga agtcatctta agttcattaa tctcaattgt aatggtagct gtcttgatat
     4081 ggattgcaat taaaacatat aaagattcag tacttacatt tgaacgtggc ttatttaatt
     4141 cattgaaacg tgtatttaaa aaataaaatt gatgagagtg acacacattt atcatataaa
     4201 atgatgatga aagcgtgtta ctcttatttt tttatattta gctatagaat aatgtctaaa
     4261 aaagtgtaca atatgaatgt gaaaacgaac tttttaaaat gggaatgtga agtaagaaga
     4321 aatgtaaaca aatgatgtgt agccgataga ttattggtag caaatgtgtg atggagtgat
     4381 ttcatgttat atccgatttt tatatttata ttagctggct tatgtgaaat aggtggggga
     4441 tacctgattt ggctgtggct tagggaagga cagtcttcac ttgttgggct aataggcggt
     4501 gtgatactca tgttatatgg tgtcattgcg acattcaatc atttccatca ttcggaagag
     4561 tatatgtagc atatggtggc gtatttatca tcatgagttt gatttttgcg atggtcgtag
     4621 ataaacaaat gccagataaa tatgatgtta tcggtgcaat catttgtatt gtaggtgttt
     4681 tagtaatgtt gctacccagc agagcttgaa cacttgtggt tagaagggag aagtaaaaat
     4741 gatagttgaa gttgagcacc aaagacaagg tgtagattta atcaaaattg ataatgatga
     4801 aactaaaatt atttttacga attatggagc aagagtagtg tcttggaaat atcatgataa
     4861 taatattgtt cttggaaatg ttgttgaagc ggatgaattt tatcatagta atccttttaa
     4921 atttggtgct tctataggaa gatatagcgg tagaattgat aatgctaaat ttaagatgaa
     4981 aggtaaagaa tatcagttag aaaaaaacaa cggcgaacat catttacatg gtggatgtca
     5041 tggtttggac aataagttat ttgattatga aattagaaat gaaattgctc aaattaaagt
     5101 gatatttaag acggtgttga aatcagctga tgatcatttc ccgggtgata tcgatgtgac
     5161 gattacacat atttatgatg cggatcacca atggtcgatt gaatacgaag cagttgcatc
     5221 agaagacaca ttgtttagtc ctacgaatca tgtgtacttc aatttgaatc gagataataa
     5281 tgtcgttgat aatcatcgca tttcaagtaa tcaattagat atgtatgtat tagatgagcg
     5341 aaatattgtt acaggcgata ttctagattt acatgaagtg tttgaagata acaagataaa
     5401 attgagtgat atttttacat cacaacatgc gcaattaagc caacaaatga cacgttttgg
     5461 tggtcttgat cacccattta cagttggtga acataaaatg tatgttgaaa atcatgaatt
     5521 tatgttagag gtcgatacag atatgcctca tgttgtattc tttactttta atcagcctga
     5581 tgagtgggat agtccattta atatttataa accacattct ggctttacat tagaaacaca
     5641 atttttacca aatgatatta atttatatgg agaaaaagca ccgtcaattt taaaagctgg
     5701 tgaagtgttc aattcgaaaa caagtttccg tatcgaagaa aaagtagaaa atgattaaaa
     5761 gtatcggcat ttatataata tttatgttat ttggcagaat tttgaatagg ttatcaagaa
     5821 tcgtatcaaa tgaagtgaca tctttaatat acagtttgaa ataaagaaaa tatataacat
     5881 taaaaaggaa tcaatagcat cagtagttat agataagact attatacaaa cgatgtgtaa
     5941 gttgattcct ttttgttttg aaaagttcat ttaacactta taatgaaagg taattatttc
     6001 aatgttctgt tatacatttt ttgaagttta tcgcgtcttg ttggtgacag aaatggattg
     6061 tttagtgcat atcgtaacat atcttgattt tgtctatcat tataataaag gtcattaagc
     6121 tgttgtacag ataaacgatg ttcgattggt gcttcttgta ttaagtaaag ctgatcattt
     6181 ggagatacat agccttgttt taatacccgg aaatagaaac ctgttttacc agatgtagac
     6241 atgcgcttca ctaaatcagg aatattatat tttgcttgaa ttttccagca cggttctcta
     6301 atttcagaaa cctcaattaa cgcttcacct aaacgatatt gattaccaaa gtaaacatca
     6361 gattcgtcta aataatcaaa tgttaaattc tctccaaaca tcgcatgagt aggtagtgaa
     6421 ggtaaatcat cttgatacag tgcatagtta tgtttactaa acccacaaac tgctttatgt
     6481 ggcccaccat gatctttata agcctgttca tcaccagtga aaccagttga agataaccat
     6541 gttgtttgtg aaatcttagt tttatctaaa gcagagcgca tcggtctttt cgagctataa
     6601 ggcaaatctt ggatttttcc tgtcgaaatt gcgtgaattg atatcatatc attctcctta
     6661 acgttaagtt aaagtatatt gtactataaa acatttttag aattgtaaat tctgattgat
     6721 atgtttaaaa aaatgttaga aataagggta tgttaattta tatgagtcat gtaaaatatg
     6781 aattgaatag attacataaa tatgggaggc taccttcatg aaagatgtca aagcacttaa
     6841 gttaatgaca ttaaatgatg ttttaagtca aatcaatggt gacatgacgc tgggaattgg
     6901 tacaggaagt acaatggaat tactcttacc tcaaatggcg caactaatta aagaacgtgg
     6961 ttacaatatt acaggtgtat gcacttctaa taaaattgca tttttagcaa aagaactagg
     7021 tattaaaata tgcgaaatca atgatgttga tcatatcgac ttagccattg atggtgctga
     7081 tgaagtagat ccatctttaa atataattaa aggtggcggt ggtgcgctgt tcagagagaa
     7141 agttatagat gaaatggcat cgcgttttgt tgtggttgtc gatgaaacga aaatggttca
     7201 atacttaggt gagacgttta agttaccagt agaggtggat aaatttaact ggtatcacat
     7261 attacgtaaa attgaatcat acgctgatat aaaagtggaa cgccgtgtaa acgaagatgt
     7321 cgcatttata actgataatg gcaattatat tttagattgt aagttaccaa aaggaattga
     7381 cccatataag ttccatgagt atttaattca tctgacaggt gtgtttgaga caggatactt
     7441 tttagatatg gcagatcaag ttattgtagg cactcaagag ggtgttaaaa ttttagaaaa
     7501 ataataatag tatagaaaag cgcttgctag catcatcttc ttaagaggta ctagcaagcg
     7561 ctttgttatt atatgttttt atctgaagat tgttcttcag ttttttcgat atgtttttct
     7621 gcatcgatta caactgatga acgtctgtct tctttataag tcgcaggttc ttttaatgat
     7681 tgtatttcat cttcatttga atcgtttgtt aaatcgtcac tttgtggtgc atgtttaact
     7741 gattctgctg attctactga ctccgaagtg atgtcatgat cttcatcatg attagattca
     7801 gtttgattat ctatgtgatg ttgaggttct gttttttcag taccttcatg aatgtttggt
     7861 tcgtcagtca ctgtattttc agtatcattt ttagcaatac cgaccgttga tgcagtagct
     7921 acacctgctt tttcagcatc tttaatattt gaagaagatt tttcagcctc agtatgatta
     7981 gtttcttcat cgtcattgac atggtctaaa taattattag gctcaagttc ttcaaggttt
     8041 cgtcttgttg ttaaatatgc aatacctcgg ataattaagc ttaaaccaat gtatcctact
     8101 gcaacgattg ctgttgaaat ggcgatgact ttgattgaaa atagatcgcc gatttcttcg
     8161 ctaaacaaga aaataagtcc aaatgtcatt gaagcatgga atgtcgttgc aatataaatt
     8221 gtacgtcctt tagtcgctct aattaattca ccaagaatca tagagaatga gaatgtataa
     8281 aggaagttat aagcagcaaa ttctgtacca taagttgtat ttgctgagaa aactgaatac
     8341 atcaaaccaa caacaatact tgcaaagaac gtgttcattt tcgtttcaac aatattttgt
     8401 aagtatgaac ggaatccgaa ttctactacg aacgccatta gaatatgtcc aatcagaatg
     8461 tgtgtaatag gtactgataa gcctgttgat tgtaataaaa taaagctatc tgcaaatgta
     8521 ttaaagctgt acataccaat aattagaata attaaaggta aaattaaagc tagcaataga
     8581 cgttcaatta ctttcaggct gattgagaat tttaaacctg caagttggac ctttttatat
     8641 ttgaaaacga gtatacaaat gattgcagca attaatggtg ctagatctgt aacttcaaat
     8701 ataaagtgtt tgacaccaat tatagactgg aaatctctga gcataatgga taacgccatt
     8761 gtaatgacaa agaagacgaa aatcgtcatt gcccattgaa aaccagaaat tttattgttc
     8821 ttcattatat gtaacctcca ttaggtaaca agcaaaatat cttttagtaa caattataca
     8881 tattacaagc cgagagataa attgtctatg tcaatattaa tgaaaatgta atagtcttga
     8941 cgtattttat taacataaat cagctaagta ttcgttatta catagaaaat aggggtaaaa
     9001 gaaatgtagt taactatttt taagatacgg atttaactat gaattgaatt caaaatttcc
     9061 tatacgttat actttaattg ttaataagcc acataaataa gagggggaaa tgctgtgtac
     9121 aagcaaggtg aaccaaattt atggactgga aggttagata gtgaaacaga cccgaaaaaa
     9181 tttagacatt ttcaaacagt aacatttgaa gatttgtcta agctggaaaa gagtagtagg
     9241 ccatcagggg ttggtatatt aggctatgct gttgacaaag gtgttgcttt aaacaagggg
     9301 cgcattggtg caaaagaagg accagatgcg attaaacaag catttgcagg tttgccggat
     9361 ttgaatcaat gtgaagcttt agtcgattac ggaaatgttt atcatgatca tgaggaatta
     9421 attgatactc aaaaagaatt tgctatgctt gcagcgaagt caattgctaa tcatagacaa
     9481 acatttttat taggtggggg acatgatatt gcgtatgctc aatatttagc aacacgtaaa
     9541 gtctatccaa cacaatctat tggtgtgata aatattgatg cgcattttga tacacgtgct
     9601 gaacaacaat ctacatctgg aacgagcttt agacaaattt tagaagaaga tgaaaacaca
     9661 gattatttag tgcttggtat tgctcaaggt ggtaatacgc aaagtttatt tgattatgct
     9721 aaagagaaaa agattgatta tgtctttgca gatgaattat tgagtcacgt atcaccaaca
     9781 attaaagata tgattgaacg ttttgtacat gaacatgatg tcattatgtt tacgatttgt
     9841 atggatgtca ttgatagtgc gtttgcgcct ggggtaagtg cgccggcagt gttaggtttg
     9901 tatccacata ctgttcttga attggcaaaa cgtattattc caagtgataa ggtgtcttca
     9961 gttagtattg ctgagatgaa tccaacatat gacgctgaca atagaactgc gaagctcgtt
    10021 gctaatttag tgcatcattt tttaaaataa ttaaaaatat ttatatgtga cgaaatttgc
    10081 attgcagggc agaatgtgag tatttcgtaa tagaagttat attaacgttg atatatttga
    10141 aaaataattg cagtaagaag actcttaagt tgtagtcatc ttactgctta tttatgtttg
    10201 ttggtctgaa tgtaatgatt tatacatgga aatcataaaa ttgggtgtga aattcttata
    10261 cagttgactg cgcaactgca taagaggcac taataactta agttaaaggc aaatgatata
    10321 cagttgattg agcaactgca taagaggcac taataactta agttaaaggc aaaaggtata
    10381 cgatgatctg
//
LOCUS       DALMNS010000097        10322 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.097, whole genome shotgun sequence.
ACCESSION   DALMNS010000097 DALMNS010000000
VERSION     DALMNS010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10322
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.097"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(131..400)
                     /locus_tag="O6Y56_002142"
     CDS             complement(131..400)
                     /locus_tag="O6Y56_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575387.1"
                     /translation="MAENNQNSLVTKIATYGSFIAIASFVILFISIFLKFSFNIEFTA
                     TIMNICRYTLILGFILMSLPDVVDKNIKKIIFDAFIIIVFIFFLL"
     gene            712..1398
                     /gene="mtnN"
                     /locus_tag="O6Y56_002143"
     CDS             712..1398
                     /gene="mtnN"
                     /locus_tag="O6Y56_002143"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HDB5575388.1"
                     /translation="MIGIIGAMEEEVTILKNKLTQLSEISVAHVKFYTGILKDREVVI
                     TQSGIGKVNAAISTTLLINKFKPDIIINTGSAGALDESLNVGDVLISDDVKYHDADAT
                     AFGYEYGQIPQMPVAFQSSKPLIEKVSQVVQQQQLTAKVGLIVSGDSFIGSVEQRQKI
                     KKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAEMSFEAFLEKAAVSSS
                     QTVEALVSQL"
     gene            1418..1945
                     /locus_tag="O6Y56_002144"
     CDS             1418..1945
                     /locus_tag="O6Y56_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqeG family HAD IIIA-type phosphatase"
                     /protein_id="HDB5575389.1"
                     /translation="MGLVRKFFMPNSYVQSIFQIDLDKLVDKGVKGIITDLDNTLVGW
                     DVKEPTERVKAWFKEANEKGITITIVSNNNESRVASFSQHLDIDFIFKARKPMGKAFD
                     KAITKMNIRPDQTVVIGDQMLTDVFGGNRRGLYTIMVVPVKRTDGFITKFNRLIERRL
                     LRHFSKKGYITWEEN"
     gene            1946..3046
                     /gene="yqeH"
                     /locus_tag="O6Y56_002145"
     CDS             1946..3046
                     /gene="yqeH"
                     /locus_tag="O6Y56_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YqeH"
                     /protein_id="HDB5575390.1"
                     /translation="MSDILKCIGCGAPLQSEDKNKPGFVPEHNMFRDDVICRRCFRLK
                     NYNEVQDVGLESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA
                     ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIREN
                     EDVYIVGTTNVGKSTLINKLIEASVGEKDVVTTSRFPGTTLDMIDIPLDETSFMYDTP
                     GIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPLV
                     CFFSNDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQNFDLNEVKAVRLETGKEKRDVM
                     ISGLGFITIGPGAKVIVRVPKNVDVVLRNSIL"
     gene            3060..3866
                     /gene="aroE"
                     /locus_tag="O6Y56_002146"
     CDS             3060..3866
                     /gene="aroE"
                     /locus_tag="O6Y56_002146"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDB5575391.1"
                     /translation="MKFAVIGNPISHSLSPVMHRANFNSLGLDNTYEALNIPIEDFHL
                     IKEIISKKELDGFNITIPHKERIIPYLDYVDEQAINAGAVNTVLIKDGKWIGYNTDGI
                     GYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRTMARFESWNLN
                     INQISLADAEKYLAEFDIVINTTPAGMAGNNESIINLKHLSPNTLMSDIVYIPYKTPI
                     LEEAERKGNHIYNGLDMFVYQGAESFKIWTNKDADINSMKTAVLQQLKGE"
     gene            3870..4160
                     /gene="yhbY"
                     /locus_tag="O6Y56_002147"
     CDS             3870..4160
                     /gene="yhbY"
                     /locus_tag="O6Y56_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HDB5575392.1"
                     /translation="MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRE
                     LIKVHVLQNNFDDKKELAETLSEATRSELVQLIGSMIVIYRESKENKEIELP"
     gene            4163..4732
                     /gene="nadD"
                     /locus_tag="O6Y56_002148"
     CDS             4163..4732
                     /gene="nadD"
                     /locus_tag="O6Y56_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HDB5575393.1"
                     /translation="MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPL
                     KKHNNFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELY
                     FVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIR
                     QRVSEGKSIQVLVPKSVENYIKGEGLYEH"
     gene            4722..5306
                     /gene="yqeK"
                     /locus_tag="O6Y56_002149"
     CDS             4722..5306
                     /gene="yqeK"
                     /locus_tag="O6Y56_002149"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     YqeK"
                     /protein_id="HDB5575394.1"
                     /translation="MNIDKAKRLAKEKLPEKRYNHSLRVAETAIKLAEIYDGDTSKVE
                     LAGVLHDFCKYDDLGKMYQIVRQYELGNDLLSYGSEILHGPVCAAIMEHEYGINDEEV
                     LMAIKYHTTGRQQMTKTEKLIFIADYIEPGRTIPGVDDIRDMAYNQGSLDKTIYEISK
                     RTVLFLIQKDITVYNKTIDCLNYYNYSDERIKDD"
     gene            5307..5660
                     /gene="rsfS"
                     /locus_tag="O6Y56_002150"
     CDS             5307..5660
                     /gene="rsfS"
                     /locus_tag="O6Y56_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDB5575395.1"
                     /translation="MNSQELLAIAVDAIDNKKGEDTISLEMKGISDMTDYFVVTHGNN
                     ERQVQAIARAVKEVANEQNIEVKRMEGYNEARWILIDLADVVVHVFHKDERNYYNIEK
                     LYQDAPLESYGQVAY"
     gene            5663..6379
                     /locus_tag="O6Y56_002151"
     CDS             5663..6379
                     /locus_tag="O6Y56_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDB5575396.1"
                     /translation="MLQYAEMSLVYDQLTQDQPYEKWFEIVKNHCKDESNILDIGCGT
                     GSLTVQLEALGNVTGMDLSVDMLTVAAQKSANVNWLEGDMTSFDLQQQFDIITIFCDS
                     LNYLQDETAVIETFINVYHHLTDSGVFIFDVHTVYKMMTLFNNQSYIDDKGDIFLAWD
                     AVQGDLPLSVYHDMTFFIRHEDETYSRFDESHFQRTFDEKTYLSWLAQVGFKHVETFT
                     DFNIDEHNEDAERLFFIAKK"
     gene            6419..7105
                     /locus_tag="O6Y56_002152"
     CDS             6419..7105
                     /locus_tag="O6Y56_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HDB5575397.1"
                     /translation="MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYT
                     SRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSKNKGPVYVDVKGAVKHPNVYKMT
                     SKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
                     GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKT
                     FDKLKSYFTT"
     gene            7197..7658
                     /locus_tag="O6Y56_002153"
     CDS             7197..7658
                     /locus_tag="O6Y56_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000439692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComE operon protein 2"
                     /protein_id="HDB5575398.1"
                     /translation="MERIKWEEYFMAQSHLLALRSTCQRLSVGATIVKDNRIIAGGYN
                     GSVAGEVHCIDEGCLIEDGHCIRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCT
                     KSIIQAGIKRIYYAEDYHNHEYATKLLKQSGIEFKKIPFSPEYVAKYLTKG"
     gene            7663..9864
                     /locus_tag="O6Y56_002154"
     CDS             7663..9864
                     /locus_tag="O6Y56_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HDB5575399.1"
                     /translation="MLYVALSMIVGVLWNSSKVLSTFLFILLLYIAYRKNKIVYAPIS
                     LFLIIFSSWYLHYSQQAIFNYINYIERNSQFNERAQVIQIQRQGSDTYKGRLSLKNEI
                     YPFFLTNKKNFDLKEIESRNCIVKGQCKVNDNKFVTLKLQSIVVQSCLESNRSNLIEK
                     HKQFIMNRIYDSGIKFPDRIMALITGDVKEINEQFKERVKEIGIYHLLAVSGSHIAAI
                     VFLIYQPLKRLNLPLFVIKGITIIVLALFAQYTNYAPSAVRAIIMTTLVLLITKQIKI
                     KGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISFFIMLLFPFLQQLSKLQSLFIITFI
                     AQLASFIVAIPNFHQLQWMGFLSNLIFVPYYSIILFPLSILFFITSHFIVRLTPLNYL
                     VDLSFNFHDWLLDLFTRIKQSHFSVPKFNDWIFIIFIISVYYIFWLLSKRKYILVTFW
                     TIIILTLLITFPTNSHHKITMLNVGQGDSILYEGGKNQNVLIDTGGKVINDTKQPSYS
                     ISKYHILPTLNERGINELEYLILTHPHNDHIGELEYIISHIKIKHIVIYNKGYSSNTL
                     MLLSKLSHKYNIKLMDVRQVSSFKLGDSSFLFFDSFIPNSRDKNEYSIITMITYQNKK
                     VLLMGDASKNNESLLLKKYNLPEIDILKVGHHGSKTSSSKEFIEMIKPKISLISSGKN
                     NMYHLPNIEVVKRLQRIRSRIYNSQQNGQVTIDLDDNLKVDSNSYGNASGL"
     gene            9921..>10322
                     /locus_tag="O6Y56_002155"
     CDS             9921..>10322
                     /locus_tag="O6Y56_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDB5575400.1"
                     /translation="MSDNIVAIYGDVPELVEKQSAEIISQFLKSDRDDFNFVKYNLYE
                     TEIAPIVEETLTLPFFSDKKAILVKNAYIFTGEKSPKDMAHNVDQLIEFIEKYDGENL
                     IVFEIYQNKLDERKKLTKTLKKHARLKKIEQM"
BASE COUNT         3782 a         1296 c         1875 g         3369 t
ORIGIN      
        1 aaaaacagca gtaaggaggc taacactcag aaaagtctta ctgctgtttt ctattagaat
       61 gatctttaat gcgcacagga attcgatacg aaacaaatat gattatctgt gtaattacaa
      121 aataaaacta ctatagtaaa aagaagataa agacgatgat aataaatgca tcgaatataa
      181 ttttcttgat gtttttatca acaacatcag gtaaggacat aagtataaat cctagaatta
      241 gagtgtagcg acatatgttc ataattgttg ctgtaaactc gatattaaat gaaaacttta
      301 aaaatatact tataaataaa atgacaaacg acgcaattgc aataaaactg ccgtatgtag
      361 ctatctttgt tacgagacta ttttgattat tttcagccat tgtaaaatcc tcttatttca
      421 tcttaattat tttaaacata tcattttcct gttatttaat aaagtttctt gacacgattg
      481 gctgatgtaa ttgatatgat tagttttgaa aaatagacaa attagatgca ttgatttcac
      541 tgttatgagt tcataaataa ttatttatga taccacgtta ttgtgaatgt ttttataaaa
      601 ataaagcaaa agttttatat agtaatgaaa atcatgatac ttgtcgttgt agtgattaaa
      661 atgtgataaa ataacaaatg ctaggatttt ttaaaagagg tgaatcaaag gatgattggt
      721 ataattggtg ccatggaaga agaagtaaca atattaaaaa ataaattaac acaattaagc
      781 gaaatttcag ttgcacatgt taaattttat actggcattt taaaagatag agaagtagtg
      841 attacccaaa gcggcattgg aaaagttaat gctgcaattt ctacgacatt attaattaat
      901 aagtttaaac cggacatcat tattaataca ggttctgctg gagctttaga tgaaagttta
      961 aatgtaggtg atgttcttat aagtgatgat gtaaaatatc atgatgcgga tgcaacagca
     1021 tttggttatg aatatggaca aataccacag atgccggtag catttcaatc aagtaaacct
     1081 ttaatagaaa aagtatctca agttgtacaa caacaacaat taacagctaa agtaggctta
     1141 attgtaagtg gtgatagctt tatcggtagt gttgaacaac gccaaaaaat taaaaaagca
     1201 tttccaaatg cgatggcggt tgaaatggaa gcaactgcaa ttgcacaaac atgttatcaa
     1261 tttaatgtac catttgttgt agttcgtgca gtttcagact tagcaaatgg agaagcggaa
     1321 atgagcttcg aagcattttt agaaaaagca gctgtatcat caagtcaaac tgttgaagca
     1381 ttagtgtctc aattataaaa aggtaaaggt gagttaaatg ggtttagttc gcaagttttt
     1441 tatgccgaat tcatatgttc aatcaatatt tcaaattgat ttagacaagt tagtggacaa
     1501 aggtgttaaa ggtattatta cagatttaga taatacgcta gtaggttggg atgttaaaga
     1561 acctacagaa cgtgttaaag catggtttaa ggaagctaat gaaaaaggaa tcactattac
     1621 aatcgtgtct aataataatg agtctcgtgt tgctagtttt agtcagcatt tagacatcga
     1681 ttttattttt aaagcgagaa agccaatggg gaaagcgttt gataaagcaa taactaagat
     1741 gaatatcaga ccagatcaaa ctgttgtaat aggtgaccaa atgcttactg atgtatttgg
     1801 tggtaatcgt cgaggtttat atacaattat ggtcgttcca gttaaacgaa ctgatggctt
     1861 tattacgaag tttaatagat taattgaaag acgattatta cgtcatttca gtaaaaaagg
     1921 ttatatcaca tgggaggaaa attgattgtc tgacatttta aaatgtatcg gttgtggtgc
     1981 gccacttcaa tctgaagata aaaataaacc tggttttgta ccagagcata atatgtttcg
     2041 tgatgacgtg atttgcagac gttgtttccg cttgaaaaat tataacgaag ttcaagatgt
     2101 aggattagaa agtgaagact ttttaaaatt attatcagga cttgcggata aaaagggtat
     2161 tgtcgtcaat gttgtggatg tatttgactt tgaaggatca tttattaatg cagttaaacg
     2221 tattgtcgga aacaaaaaaa tcattttagc agcaaataaa ttggatttat tgccgaaaca
     2281 aattaataaa cgtcgagtta aagaatggtt aaaacgaaca gcaagaaaat atggtttgga
     2341 agctgacgat gtcgtattaa tttcagctga aaaaggctgg ggcatagacg acttattatc
     2401 atcaattgcg aatattcgag aaaatgaaga tgtgtatatt gtagggacaa cgaatgttgg
     2461 gaaatctaca ttgattaata aactgattga agctagtgtt ggtgaaaaag atgtagtaac
     2521 aacttcaaga ttccctggaa caactttaga tatgatagat attcctttag atgaaacatc
     2581 atttatgtat gatacaccag gtattattca agatcatcaa atgacgcatt tagttagtga
     2641 aaaagaattg aaaattatta tgcctaagaa agaaataaaa caacgcgtat atcaattaaa
     2701 tgaggcgcag acattattct tcggcggtct agcgcgcata gattatgtat caggtggtaa
     2761 acgtccgtta gtttgtttct tttctaatga cttgaatata catcgtacta aaacggagaa
     2821 ggccaatgat ttatggcgta atcaacttgg cgatttattg acgccacctg gaaatccaca
     2881 aaattttgac cttaatgagg taaaggctgt tagacttgaa acaggcaaag agaaacgcga
     2941 tgttatgatc tctggtctag gctttataac tataggacca ggagctaaag taatcgttcg
     3001 tgttcctaaa aatgttgatg ttgtattaag aaattctatt ttataaggtg atttaaaaaa
     3061 tgaaatttgc agttatcgga aaccctattt cacattcctt gtcgcccgtt atgcatagag
     3121 caaattttaa ttctttagga ttagataata cttatgaagc tttaaatatt ccaattgaag
     3181 attttcattt aattaaagaa attatttcaa aaaaagaatt agatggcttt aatatcacaa
     3241 ttccccataa agaacgtatc ataccgtatt tagattatgt tgatgaacaa gcgattaatg
     3301 caggtgcagt taacactgtt ttgataaaag atggcaagtg gatagggtat aatacagatg
     3361 gtatcggtta tgttaaagga ttgcacagcg tttatccaga tttagaaaat gcatacattt
     3421 taattttggg cgcaggtggt gcaagtaaag gtattgctta tgaattagca aaatttgtaa
     3481 agcccaaatt aactgttgcg aatagaacga tggctcgttt tgaatcttgg aatttaaata
     3541 taaaccaaat ttcattggca gatgctgaaa agtatttagc tgaattcgat atcgttatta
     3601 atacaacacc agcgggtatg gctggaaata acgaaagtat tattaattta aagcatcttt
     3661 ctcccaatac tttaatgagt gatattgttt atataccgta taaaacacct attttagagg
     3721 aagcagagcg caagggaaac catatttata atggcttaga tatgtttgtt taccagggtg
     3781 cggaaagctt taaaatttgg actaataaag atgctgatat taattctatg aaaacagcag
     3841 ttttacaaca attaaaagga gaataacata tgcttactgg caaacaaaaa agatacttaa
     3901 gaagtttagc acacaatatt gatccgattt ttcaaattgg aaaaggcggt atcaacgaaa
     3961 acatgattaa acaaatagat gatacgttag aaaacagaga attgataaaa gtacatgtac
     4021 tacaaaataa ctttgatgat aaaaaagaat tagctgaaac attaagcgaa gctacgcgta
     4081 gtgaattagt gcaactgatt ggatctatga tagtgattta tagagaatct aaagaaaata
     4141 aagaaattga attgccataa caatgaaaaa gatagtactt tacggcggtc agtttaaccc
     4201 tatccatact gcacatatga tagtagctag cgaagtattt catgaattac agccagatga
     4261 attttatttt ttacctagtt ttatgtctcc attgaaaaag cacaataatt ttatagatgt
     4321 tcagcacaga ttaacaatga tacagatgat tatcgacgag cttggttttg gagatatttg
     4381 cgacgatgaa attaaacgtg gtggtcaaag ttatacctat gacacgatca aggcattcaa
     4441 ggagcaacac aaagacagtg agttgtactt tgttattggg acagatcagt ataaccaact
     4501 agagaaatgg tatcaaattg aatacttaaa agaaatggtt acttttgtag ttgtaaatcg
     4561 agacaaaaat agtcaaaatg ttgaaaatgc tatgattgca attcagatac ctagggtaga
     4621 tataagttcg acaatgattc gacaaagagt tagtgaaggg aagtctatcc aagttcttgt
     4681 tcctaaatcc gttgaaaact atattaaggg ggaaggatta tatgaacatt gataaagcaa
     4741 aacggcttgc aaaagagaaa ctgccagaga aacgttataa tcattcttta agagttgcag
     4801 aaacagcgat taaattagca gaaatttatg atggagacac tagtaaagta gaattagcag
     4861 gtgtattaca tgatttctgt aaatatgatg atttaggtaa aatgtatcaa attgttcgac
     4921 aatacgaatt aggtaatgat ctactgagtt atggtagtga aatattgcat ggtcctgtgt
     4981 gtgcagcaat catggaacat gaatatggta tcaatgatga ggaagtatta atggctatca
     5041 aataccatac tactggacgt caacaaatga caaaaactga aaaactgatt tttattgcag
     5101 attacatcga acctggaaga acaatcccag gagttgatga tattcgagat atggcataca
     5161 atcaaggtag tttagataag acaatttatg aaatttctaa acgcacagta ctatttttaa
     5221 tacagaaaga tattacggta tataataaga cgattgactg tttaaattat tataactata
     5281 gtgacgaaag aataaaggat gattaaatga attcacaaga attattagca attgctgtgg
     5341 atgcaattga caataaaaaa ggcgaagata caatttcttt agaaatgaaa ggtatcagcg
     5401 atatgacaga ttattttgtt gtaacgcacg gaaataatga acgacaagtt caagcgattg
     5461 ctagagcggt gaaagaagta gccaatgaac aaaatataga agtaaaacgt atggaaggtt
     5521 acaatgaagc gcgttggata ttaattgact tagctgatgt tgtggtacat gttttccata
     5581 aagacgaaag aaattattat aatattgaaa agttatatca agatgcacca ttagaatcat
     5641 atggtcaggt tgcgtattaa ttatgttgca atatgcagaa atgagcctag tgtacgatca
     5701 attgactcaa gatcaaccat atgaaaaatg gtttgaaatt gtaaaaaatc actgcaaaga
     5761 tgaatcaaat attttagata ttggatgcgg tactggtagt ttaacagttc aattagaagc
     5821 tttaggtaat gttactggta tggatttaag tgttgatatg ttgactgttg cagctcaaaa
     5881 atcagcaaat gtaaattggc ttgaaggaga tatgacatct tttgatttgc aacaacaatt
     5941 tgatatcatc actatttttt gtgactctct aaattatttg caagatgaaa ctgcagttat
     6001 tgaaacattc atcaatgttt atcatcatct gactgattca ggtgtattta tttttgatgt
     6061 acatactgtt tataaaatga tgactttgtt taataatcaa agttatattg atgataaagg
     6121 ggacattttt ttagcatggg atgctgtgca aggagattta cctttaagtg tttatcatga
     6181 tatgacattt ttcattcgac atgaagatga aacatattca agatttgatg agtctcattt
     6241 tcagagaaca tttgatgaaa agacatattt gtcttggtta gctcaagtcg gttttaaaca
     6301 tgttgaaaca tttactgatt ttaatataga tgaacataac gaagatgcag aaagattgtt
     6361 tttcattgcg aaaaaataaa agtaaaacca ctcgctcaga cgtgtataaa gttgaggagt
     6421 ggttttattg tatcaatttt tattacgcta taaagatttt ttaactcaat ggaagttata
     6481 tattataagt gctgttgttt taattatggt attaattggt tttatattct ggagacaaga
     6541 tgattatact tctagaaatt ttgaaaataa agatactgct ctgaaacaaa gcactagtga
     6601 aaatagtagt ttgtccaaat tagaagatgt ccaggtcaaa gatggagata attccaaaaa
     6661 taaaggtcct gtatatgtcg atgtaaaagg tgctgttaaa catcctaatg tttataaaat
     6721 gacatctaag gatagagtag ttgatttgct tgataaagca caattattgg atgatgcaga
     6781 tgtaagtcaa attaatttgt ctgaaaaatt aacagatcaa aaaatgattt tcattcctca
     6841 taaaggacaa aagaatgttg aaccacaaat tggagtaaac agtgtgcacg taaaaaatgg
     6901 gaacacaaat aatactaaag taaatttaaa tacggcatct gtatcagaat tgatgtctgt
     6961 tcctggagtt gggcaagcga aagctaatgc aattgttgaa tatcgcaacc aacaaggtgc
     7021 atttcaagaa attgacgatt tgaaaaaagt aaaaggtttt ggaagtaaaa cttttgataa
     7081 actgaaatct tatttcacga cataatggat tattttaatt gcaaatttta ttttttgtga
     7141 ttaatcttat attattagaa aatgttacta aattttaagt atggaaggtg aacatcttgg
     7201 aaagaatcaa atgggaagaa tattttatgg cacaaagtca tttgctagca ttacgttcaa
     7261 cttgtcaaag actatctgta ggtgcaacga ttgttaagga taatcgtatt attgctggtg
     7321 gttataatgg ctctgtagct ggcgaggtgc attgtataga tgaaggatgt ttaattgaag
     7381 atggacattg tatcagaacg atacatgcag aaatgaatgc tttattacaa tgtgcaaaac
     7441 aaggtgtatc tactgaaggt gcaacaatct atgttactca ttttccatgc ctaaattgta
     7501 caaagtcaat tattcaagca ggtataaagc gtatctacta tgcagaagat tatcataacc
     7561 atgaatatgc aactaagtta ctcaaacaat ctggtattga atttaaaaaa attccatttt
     7621 caccagaata tgttgctaaa tatctgacta aaggttgatg ttttgctgta tgtcgcgtta
     7681 tcaatgattg taggagtgct ttggaattct agcaaagtgc tctctacatt tcttttcatt
     7741 ttacttttgt atattgctta tcgtaaaaat aaaatcgttt atgcccctat ttctcttttt
     7801 ttaatcattt tctcctcatg gtatttacat tattcacaac aagcaatatt taattatatc
     7861 aattatattg aacgtaattc tcagtttaat gagcgtgctc aagtaatcca aattcaacgt
     7921 caaggtagtg acacatataa aggtaggttg agtttaaaaa atgaaatata tcctttcttt
     7981 ttaacaaata aaaagaattt tgatttaaag gaaattgaaa gtcgtaattg tattgttaaa
     8041 ggacaatgca aagttaatga caataagttt gtaactctta aattacaaag tatagttgta
     8101 caaagctgcc tagaatcgaa ccggtctaat ttaattgaga aacataaaca gtttataatg
     8161 aatcgaattt atgattcggg tattaagttt ccggatcgta ttatggcatt gattactggt
     8221 gacgtaaaag aaattaatga gcaatttaag gaacgtgtta aagagatagg tatatatcat
     8281 ttgctggcag ttagtggctc gcatatagct gcaattgtat tcttaattta ccaaccttta
     8341 aaacgattaa atttaccttt atttgtcatt aaaggaatta caatcattgt attagcttta
     8401 tttgctcaat acacaaatta tgcacctagt gctgtaagag ctataataat gacaactctt
     8461 gtactgctta ttactaagca aattaaaata aagggtattc agctattagc atttgcattt
     8521 ataattatgt ttattttaaa tccgctagtt gtttatgata ttggatttca attttcattt
     8581 atcatttcat tttttattat gctacttttt ccttttttac agcaattgtc aaagttacaa
     8641 tcattattca taattacgtt tattgcacaa ttagcttcat ttatcgttgc cattccaaac
     8701 tttcatcaac ttcaatggat gggattttta tctaatttga tttttgtacc gtactattcg
     8761 attatattgt ttccgctatc tattttattc tttattacaa gtcattttat tgtgagatta
     8821 acgccgctaa attacttggt tgacctaagt tttaattttc atgactggtt actagaccta
     8881 ttcacaagaa tcaagcaatc acatttttct gttcccaagt ttaatgattg gatatttata
     8941 atatttataa tttctgttta ttacatattt tggttattgt ctaaacgtaa atatatattg
     9001 gttacgtttt ggactataat tattctgaca ttattaataa cgtttccaac aaattcacat
     9061 cacaaaatta caatgttaaa tgtggggcag ggagacagta ttttatatga aggtggtaag
     9121 aaccaaaatg tcttgattga tacaggtggg aaagtgatta atgatactaa acaacctagt
     9181 tattcaattt ctaaatatca tattttacca acgctaaatg aaagagggat aaatgaatta
     9241 gagtatctaa ttttaacaca tccacacaat gaccatattg gtgaattgga atatattatt
     9301 agtcatatta aaattaaaca tatagtgata tacaataagg gatatagtag taatacattg
     9361 atgttattat cgaaattaag ccataagtac aacattaaac ttatggatgt aagacaagtt
     9421 agtagtttta aacttggaga tagtagtttt ctattttttg atagttttat tccaaatagc
     9481 cgagataaaa atgaatattc gattattact atgattacat atcaaaataa aaaagtttta
     9541 ttaatgggcg atgctagtaa aaataatgaa tctttactac taaaaaaata taacttgccg
     9601 gagattgata ttttaaaagt aggacatcat gggagcaaga caagtagttc taaagaattt
     9661 atagagatga ttaagcctaa aataagtttg atttcttctg gaaagaacaa tatgtatcat
     9721 cttcctaaca tagaagttgt taaacgattg caaaggattc gcagtcgcat ttacaatagt
     9781 caacaaaacg gtcaagttac aattgactta gatgataatt taaaagttga ttcaaactct
     9841 tatggaaatg caagtggttt atagatacag aaacatgata taatctattg atgtgtcaaa
     9901 cgaatgaaag ggtgtaatga atgagcgaca atattgtagc tatttatgga gatgtgcctg
     9961 aattggttga aaaacaaagt gcagaaatca tatcacaatt tttgaaaagt gatagagatg
    10021 actttaactt tgtgaaatat aatttatacg aaacagagat tgcaccaatt gttgaagaaa
    10081 cattaacatt gcctttcttt tcagataaaa aagcaatttt ggttaaaaat gcatatatat
    10141 ttacaggtga aaaatcgcca aaagatatgg ctcacaatgt agatcaatta atagaattta
    10201 ttgaaaaata tgatggcgaa aatttgattg tctttgagat atatcaaaat aaacttgatg
    10261 aaagaaaaaa gttaactaaa actctaaaaa agcatgcaag gcttaaaaaa atagagcaaa
    10321 tg
//
LOCUS       DALMNS010000098        10049 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.098, whole genome shotgun sequence.
ACCESSION   DALMNS010000098 DALMNS010000000
VERSION     DALMNS010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 10049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10049
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.098"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            125..1579
                     /locus_tag="O6Y56_002156"
     CDS             125..1579
                     /locus_tag="O6Y56_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDB5575401.1"
                     /translation="MEDNKMNRSLNSRHISMIAIGGAIGTGLFVATGNIISQAGPGGA
                     ILAYLVIGVMLYFLMSSIGELATFYPVSGSFSSYSTRFIDSSLGFTMGWLYWALWSLV
                     TSVDVIVASNVLYFWDTFKFFHPITWSLIFITILLLLNIFSVKSFGETEFWLSLIKVL
                     TIIVFVIFGFLMIFGILGGHAYGFENYTKGQAPFVGGISGFLGVLLVAGFSVGGTEVV
                     AVTAGESDDPKKSMPKAIKQVFWRILLFYVLSIAVIGAIIPYTDPSLLRASSSISQSP
                     FTIVFDRVGIAFAASVINAVILTSLLSAANSGVYTTGRMLYSLSSDKKAPQFLSKLNK
                     TTKLPLRALLTTYAVVVIVIIYANFNSNAVFNLLEIIGSMIIVVWGSSIWSQIRLRQA
                     IKKQGQDPNKVLPYKAPFYPLGPIIVITTLLFLLFGGSVEYILKDQWLNAFKNFLPLI
                     ILALIYFIHKIIHKTKFVKLETINLKPHDYDNQK"
     gene            1718..1822
                     /locus_tag="O6Y56_002157"
     CDS             1718..1822
                     /locus_tag="O6Y56_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575402.1"
                     /translation="MLPFFILDILHIVYNVDNNNFSGVKFNDWTNKFI"
     gene            1797..2111
                     /locus_tag="O6Y56_002158"
     CDS             1797..2111
                     /locus_tag="O6Y56_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575403.1"
                     /translation="MIGQTNLFDDVLKQDERFVIVVQALEEKNGQLLKRTLREYPGLN
                     HKQMNDLFTHLKELFSEESFAENQSAFSITVYTNLDYTADQIYAHVKRFRGKHDWTQT
                     AK"
     gene            complement(2439..3242)
                     /locus_tag="O6Y56_002159"
     CDS             complement(2439..3242)
                     /locus_tag="O6Y56_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDB5575404.1"
                     /translation="MTNYKVVVLDMDDTLLNSDNVISEETANYLTAIQDEGYYVVLAS
                     GRPTEGMIPTARDLKLPEHHSYIISYNGSKTINMTNEEVEVSKSIGKQDFDEIVDYCR
                     DRGFFVLTYHDGQIIYDSEHEYMNIEAELTGLPMKRVDDIKAYIQGDVPKVMGVDYVA
                     NITEARIDLNGVFNDNVDATTSKPFFLEFMAKDVSKGNAIKALCHKLGYSVDQVIAFG
                     DSMNDKSMFEVAGLAIAMGNASDELKQYADDVTLDHNENGIPHALKKLL"
     gene            complement(3300..4214)
                     /locus_tag="O6Y56_002160"
     CDS             complement(3300..4214)
                     /locus_tag="O6Y56_002160"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDB5575405.1"
                     /translation="MSNVLELTIPASTANLGVGFDSIGMALDKFLHLSVKETSGTKWE
                     YIFHDDASKQLPTDETNFIYHVAQQVAAKYSVDLPNLCIEMRSDIPLARGLGSSASAL
                     VGAIYIANYFGDIQLSKHEVLQLATEIEGHPDNVAPTIYGGLIAGYYNDVSKETSVAH
                     IDIPDVDVIVTIPTYELKTEASRRALPQKLTHSEAVKSSAISNTMICALAQHNYELAG
                     KLMQQDGFHEPYRQHLIAEFDEVKTIASQHNAYATVISGAGPTILIFSRKENSGELVR
                     ALNRNVVTCHSELVDINVSGVKERIVYQ"
     gene            complement(4216..5277)
                     /locus_tag="O6Y56_002161"
     CDS             complement(4216..5277)
                     /locus_tag="O6Y56_002161"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDB5575406.1"
                     /translation="MRRWQGLVEEFKAHLPVNENTPKLTLNEGNTPLIHCENMSKILG
                     IDLYVKYEGANPTGSFKDRGMVMAVTKAKEQGKKIVICASTGNTSASAAAYAARAGLK
                     AIVVIPEGKIALGKLSQAVMYGAEIVSIEGNFDEALEIVKEIAKSGEIELVNSVNPFR
                     IEGQKTGSFEIVQQLDGEAPDILAISVGNAGNITAYWKGFKEYQEAKGSQLPKMFGFQ
                     AEGASPIVQNKVIKNPETIATAIRIGNPASWDKATNALKESNGLIDSVTDDEILEAYQ
                     LMTTKEGVFSEPASNASIAGLIKLHRQGKLPQGKKVVAILTGNGLKDPDTAISLLDNP
                     IKPLPNDKDSIIDYIKGAL"
     gene            complement(5283..6563)
                     /locus_tag="O6Y56_002162"
     CDS             complement(5283..6563)
                     /locus_tag="O6Y56_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HDB5575407.1"
                     /translation="MKKLNIALLGLGTVGSGVVKIIEENRQQIQDTLNKDIVIKHILV
                     RDKSKKRPLNISQYHLTEDVNEILNDDSLDIIVEVMGGIEPTVDWLRTALKNKKHVIT
                     ANKDLLAVHLKLLEDLAEENGVALKFEASVAGGIPIVNAINNGLNANNISKFMGILNG
                     TSNFILSKMTKEQTTFEEALDEAKRLGFAEADPTDDVEGVDAARKVVITSYLSFNQVI
                     KLNDVKRRGISGVTLTDINVANQLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAA
                     VEDEYNAIYVIGDAVGDTMFYGKGAGSLATGSAVVSDLLNVALFFESDLHTLPPHFEL
                     KTDKTREMMDSDAEINIKEKSNFFVVVNHVKGSIENFENELKAILPFHRSLRVANYDN
                     QSYAAVIVGLESSPEELITKHGYEVDKVYPVEGV"
     gene            6754..8136
                     /locus_tag="O6Y56_002163"
     CDS             6754..8136
                     /locus_tag="O6Y56_002163"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HDB5575408.1"
                     /translation="MKVSKFGGSSVSNATQIKKVLNIINSDPERKIVIVSAPGKRHDN
                     DIKTTDLLIRLYEKVINHLDYHDKKREIIQRYDDIVKELQMDESILRTIDVTLEHYIN
                     QLKNEPKRLLDALLSCGEDFNAQLIALYNNSQGIPTKYISPKEAGIFVTDVPQEAQIL
                     DSAYSEIKKLRDYDEKLIIPGFFGVSHDGYIVTFPRGGSDITGAIISSGVRATIYENF
                     TDVSGIYKANPNIIKDPELIEEITYREMRELSYAGFSVFHDEALQPLYKDRIPVVIKN
                     TNRPQDKGTFIVHDREINAKNVISGISCDKDFTVINIKKYLMNRQVGFTRKILGVLED
                     NNISFDHMPSGIDTISIVMRSKQIQNKETKVLNEIRQKCDVDELSIEHDLAILMIVGE
                     GMNKVIGTANKITHALAESKINLKMINQGASEISMMFGIHVDDAEKAVLSTYEFCYHG
                     VALKNLCDKN"
     gene            complement(8190..8765)
                     /locus_tag="O6Y56_002164"
     CDS             complement(8190..8765)
                     /locus_tag="O6Y56_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575409.1"
                     /translation="MNAKEQLVDNLMKTSSQLFKFHGEVAMQLFLNDELKLPSIVEIC
                     VERKRLSDIVKVIPQSYALLYIDKQDQAIAKEDLSLSKIAKVYVQYDDTTIMSIFVYD
                     VVNDEWIFRLDPNIRIPKSNIYFHSLNWDVDYIKPEIVLMYDLMQHHQYHHYSNYKRV
                     IDALSYYQFFILKFVVGEKRIKDAIQRTINN"
     gene            9096..9950
                     /locus_tag="O6Y56_002165"
     CDS             9096..9950
                     /locus_tag="O6Y56_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575410.1"
                     /translation="MSFYVVLIIIIVALIGILVLNQRYSNSKIDTEVYARKQLIKKNK
                     ALSAENAELRSQMLSSNNDVGHHAYKNAKRELRKILDSYLENGKLKYYDIIVTSNLAT
                     KHPFFEYARSFDFIIVSDIGLINVDVKSWGEKTFYHFDVPDEHDTEMSNSNIEKVVGH
                     YISQQYHDQFNSSRKSIYTFTETVQPNRVIYDFYDYDPYQLAANNAKALKDHIEQNFN
                     FKVQSTGVIYFSDGTVNIIQGSEERDKYVDTVSTKSSLRRIISEAIELSKHPLNKEQV
                     DQITAIFK"
BASE COUNT         3304 a         1711 c         1481 g         3553 t
ORIGIN      
        1 gctcaagatg attaaaaaat cagaaaattt taattttttc gctttacagt gctaaatagt
       61 tattgaatag tacacttaaa aagcttacaa taatgggtat atttaaatag atgggagact
      121 aaatatggaa gataataaaa tgaaccgtag tcttaactca agacacattt ccatgattgc
      181 tataggtggt gcaattggga ctggtctatt tgtagctact ggtaatatca tttctcaagc
      241 tggtcctgga ggcgctatac tcgcttatct tgttattggt gtcatgctat atttcttaat
      301 gtcatcaatt ggagagttgg caacatttta tccagtatca ggttcattca gctcttattc
      361 aacacgcttt attgactcat ctctaggctt taccatggga tggttgtatt gggcattgtg
      421 gtcattagtt acaagtgttg atgtcatagt agcgtcaaat gtgctttatt tctgggacac
      481 atttaaattt ttccacccca ttacttggag cttaatcttt attacaattt tactattatt
      541 aaacattttt tctgtaaaat catttggaga aactgagttt tggttatcat tgattaaagt
      601 gttaacaatt atcgtattcg ttatttttgg ctttttaatg attttcggta tcttaggtgg
      661 tcatgcatat ggatttgaaa actatacaaa aggccaagca ccgtttgttg gtggtatctc
      721 tggtttctta ggcgtattat tagtcgccgg attttcggtt ggtggtacag aagtagtagc
      781 agtaactgct ggtgaatcag atgaccctaa aaagtctatg cctaaggcaa ttaaacaagt
      841 attttggcgt attcttttat tctatgtctt atcaattgca gtaattggtg caattattcc
      901 gtacacagat ccatcattat taagagcaag tagttcaata agtcaaagcc catttacaat
      961 tgtattcgat agagtaggca tagcctttgc agcatcagta atcaacgcgg ttattttaac
     1021 ttcattatta tccgctgcaa attcaggtgt ttatacaaca ggaagaatgt tgtattcctt
     1081 aagttcagac aaaaaagcac cccaattttt aagtaaatta aacaagacaa caaagttacc
     1141 tttaagagca ctattaacta cttatgcagt cgttgttatt gttattattt atgcaaactt
     1201 taattcaaat gccgtattta atttacttga aattattggt tcaatgatta tagttgtttg
     1261 gggatcaagc atttggtcac aaatacgatt gcgacaagct attaaaaaac aaggtcaaga
     1321 tcctaataag gtcctaccat ataaagcacc tttttatcca ttaggaccaa tcattgtcat
     1381 cactacgcta ttattcttgc tatttggtgg ttcagttgaa tatattttaa aagatcaatg
     1441 gttaaatgct tttaaaaact ttttaccttt aatcattcta gcgttgattt actttattca
     1501 taaaatcatt cacaaaacaa aatttgtaaa gctagaaaca attaatttaa aaccacacga
     1561 ttatgacaat caaaaataaa taaattctca cacggcagat gctttagatt atctatagca
     1621 tttgccgctt tttaatggtg taaagtagat atactttaat atctttttct agtataaagt
     1681 gtattaacta gtattctgtt tatattttat tatgaccatg ttaccattct ttattttaga
     1741 tattttgcat atcgtgtata atgtagataa caataacttt tcaggggtga aattcaatga
     1801 ttggacaaac aaatttattt gatgatgtac taaagcaaga tgagagattt gttattgtag
     1861 ttcaagcatt agaagaaaag aacggacaat tattaaagcg aactttaagg gaatatcccg
     1921 gtttaaacca taaacaaatg aatgatttat ttacgcactt aaaggaatta ttttccgaag
     1981 aatcatttgc tgaaaaccaa tcagcgttca gtattacagt ttatacaaat ttagattata
     2041 ctgctgacca aatatatgct catgtaaaac gcttcagagg gaagcatgac tggacacaaa
     2101 cagctaaata aaatcaagat gcttgcagtg attttaacaa ttaatgttag attgtcactg
     2161 cattttttaa tacattcgta attattcaga atgattcaaa tttatttatc tacctccgtg
     2221 actaattaat acttgattta tttttaaaat atacatctac tctattcgct agatatcatt
     2281 actaatctat aatatgtatt tcaaatcctc catagtataa ctgaagtcat tttcacataa
     2341 ataaagctcc cttcaaagct ttcatttttt caatgtctac tttgaaggga gcatttcaat
     2401 cttattcaaa tatcctgtgc ttaggcttat tttaaaattt ataacaattt tttgagcgca
     2461 tgtggaatac cattttcatt atgatccaac gtaacatcat ctgcatattg cttaagttca
     2521 tctgatgcat tccccatagc aatagctaga cctgcgactt caaacattga tttatcattc
     2581 atactatcac caaaagcaat gacttgatcc accgaatatc ccaatttgtg acataacgct
     2641 ttaattgcat taccttttga aacatctttg gccataaatt ctaagaagaa tggcttactt
     2701 gtcgtagcat ctacattatc attgaacaca ccattcaaat caattctagc ttcagtaata
     2761 ttcgctacat aatcaactcc catgaccttg ggtacatcgc cttgaatata tgctttgata
     2821 tcatcaacac gtttcatcgg taaaccagtt aattccgctt caatattcat atattcatgt
     2881 tcgctgtcgt aaataatttg accatcatga tatgtaagaa cgaaaaagcc tctatctcga
     2941 caataatcta caatttcatc gaaatcctgc ttaccaatcg atttacttac ttctacttct
     3001 tcattagtca tgttaatcgt tttactgccg ttataactaa taatatagct atgatgttca
     3061 ggtaatttta aatctctagc agttggaatc ataccttcag taggtctacc agatgctaaa
     3121 acaacataat aaccttcatc ttgaattgct gttaaataat ttgcagtttc ttctgatatc
     3181 acattatctg aatttagcaa tgtgtcatcc atatctaaaa cgacaacttt ataatttgtc
     3241 atatcgcatt aaatctcctc tctatttcac attcaatact attttacaat ataaagcgtc
     3301 tattggtata caattcgttc tttaacacca ctaacattaa tatctactaa ttcagaatga
     3361 catgtaacta catttctatt taaagcgcga actaattcgc cactattttc tttgcgacta
     3421 aatattaaaa tagttggtcc agcaccacta atcactgttg catatgcatt atgttgacta
     3481 gcaattgttt tcacttcatc aaattcagca attaaatgct gacgatacgg ttcatgaaag
     3541 ccatcttgtt gcatgagttt acctgctaat tcataattgt gctgtgctaa tgcacaaatc
     3601 attgtattac taattgcact acttttaacc gcttcactat gtgttaattt ttgtggtaaa
     3661 gcacgtcttg atgcttctgt ttttagttca taagttggta tcgttacaat cacatccacg
     3721 tctggtatgt cgatatgtgc aactgacgtt tctttcgaga catcattata atacccagcg
     3781 attaaaccac cataaatggt cggcgcaaca ttatcaggat gtccttcgat ttcagtcgct
     3841 aattgtaata cctcatgttt agatagttgg atatcaccaa aataatttgc gatatatata
     3901 gctcctacta aagcagaagc tgacgaacct aaccctcttg ccaatggaat atcacttctc
     3961 atttcgatac ataaattagg caagtcaaca ctatatttag cagcaacttg ttgtgccaca
     4021 tgataaataa agtttgtttc gtcagtaggt aattgcttcg atgcatcatc atggaatata
     4081 tattcccatt ttgtccctga tgtttccttt acagacagat gtaaaaattt atctaaagcc
     4141 atacctatag aatcaaagcc aactccaagg ttggctgttg atgcaggaat tgttaactcc
     4201 aaaacattcg acatgttata aagctccttt aatataatcg ataatgctat ctttatcatt
     4261 tggcaatggc tttatcggat tatctagtag tgaaatagca gtatcaggat cttttaatcc
     4321 attaccagtt aaaatcgcaa ctactttttt accttgaggt aatttacctt gtctatgcaa
     4381 tttaattaaa cctgcaatag aagcattact tgctggttca ctaaagacac cttctttagt
     4441 tgtcattaac tgatatgctt ctagaatttc atcatcagta acactatcta ttaatccatt
     4501 tgattcttta agagcattag tcgctttatc ccaactagca ggattaccaa ttcgaatagc
     4561 agttgcaatc gtttcaggat ttttaatgac tttattttgg acaattggtg atgcgccttc
     4621 agcttggaag ccaaacattt tcggcaattg tgatccttta gcttcttgat attctttaaa
     4681 gcctttccaa tatgcagtaa tattacctgc attacctaca gaaatcgcta aaatatcagg
     4741 tgcttcaccg tctaattgtt gcacaatttc aaatgagcct gtcttttgcc cttcgattct
     4801 aaatggattg acagagttta caagctcgat ttcgccactt tttgcaattt cttttacaat
     4861 ttctaaagct tcatcaaagt ttccttcaat agaaacgatt tctgcaccat acattactgc
     4921 ttgcgacaat ttacctaatg caattttacc ttctggtatt acgacgatag cttttaaacc
     4981 tgctctcgct gcatatgctg ctgcagacgc tgatgtattt ccagtcgaag cgcatattac
     5041 aattttctta ccttgctctt ttgcttttgt cacagccatt accataccgc gatctttaaa
     5101 tgaacctgtc ggattggcac cttcatactt cacatataaa tctataccta gtattttaga
     5161 catattttca caatgaatga gtggtgtatt tccctcgttc aatgttaatt ttggtgtatt
     5221 ttcatttact ggtaaatgtg ctttaaactc ttctactaat ccttgccatc ttctcattat
     5281 aattaaactc cttctactgg gtatactttg tcaacttcgt atccatgctt agtgattaat
     5341 tcttccggtg atgattccaa tccaactata acagcggcat atgattgatt atcgtaattt
     5401 gcaactctta atgatcggtg gaatggtaat attgccttta actcattttc aaaattttca
     5461 attgaacctt tgacatgatt cactaccaca aagaaattgg atttttcttt aatattaatt
     5521 tctgcatcag aatccatcat ttcccttgtt ttatctgtct ttaattcaaa atgtggtggc
     5581 aatgtgtgta aatctgattc aaagaataat gctacattca ataaatcact gacaacggca
     5641 ctacctgttg ctaaactgcc tgctcctttt ccataaaaca tcgtgtcacc aacggcatca
     5701 ccaatgacat aaatcgcgtt atattcatcc tctacagctg ctaattgatg ctttttatca
     5761 attaacgttg gttctactga tgcattaact ttgccatttt catatattcc cttaccaatc
     5821 aatttaattt tataccccag ttgattggct acattaatat cagttaaagt tacaccacta
     5881 attcctcttc gtttaacgtc gtttaattta atgacttggt taaatgataa atatgatgta
     5941 atgacaactt tacgcgctgc atccacccct tctacatcat cagttggatc cgcttcagca
     6001 aaaccaagtc ttttcgcttc atcaagtgct tcctcaaatg tcgtttgctc tttagtcatt
     6061 ttagataaaa taaaattaga ggtaccattt aaaattccca taaattttga aatattattc
     6121 gcattcaaac cattatttat ggcatttacg atcggaatac cacctgctac actcgcttca
     6181 aactttaaag ctacaccatt ttcttctgct aaatcttcta aaagtttaag atgtactgct
     6241 aataaatctt tatttgcggt aataacatgt tttttatttt taagtgctgt tcttaaccaa
     6301 tctacagttg gttcaattcc tcccatgact tcaacgataa tatctaatga atcatcattt
     6361 aaaatttcat taacatcttc agttaaatga tattggctaa tatttagcgg tctcttttta
     6421 gatttatctc gaacaagaat atgctttatg acaatatctt tatttaatgt atcttgaatt
     6481 tgctgtcggt tctcttcgat gattttaaca acaccagatc cgacagtacc taatcctaat
     6541 aatgctatat ttaatttttt cattttatgt acctccgttt gtgcttttga gaaaaacaaa
     6601 tgtattattg aaaaacacta gatgatagta tagtatagaa ttattcttta tttttgtaaa
     6661 gttcgtaata ttcaaaatat aaatacataa tatcattctt acttacaaaa ctgaatacaa
     6721 ttttctgatt ttttagaaag gttggcatgc actatgaaag tttccaaatt cggtggtagc
     6781 tccgtctcca atgctactca aattaaaaag gttttaaata ttattaattc tgatccagag
     6841 cgaaagattg ttatcgtttc tgctccaggt aaaagacatg ataatgatat taaaacaact
     6901 gatttgttaa tcagattata tgaaaaggtc attaatcatc ttgattatca tgataaaaaa
     6961 agagaaatta ttcagcgtta tgatgatatt gtaaaagaat tgcaaatgga tgaaagtatt
     7021 ttacggacga tagatgtgac tttggaacat tatattaatc aattaaaaaa tgaaccgaag
     7081 agactattag atgcattact ttcttgtggt gaagatttta atgcgcaatt gatagcttta
     7141 tataataata gtcaaggtat accaacaaaa tatatatcac cgaaggaagc gggtattttt
     7201 gttactgacg tcccacaaga agcacaaata ttagatagtg cttactctga aattaaaaaa
     7261 ttaagagatt atgatgagaa actaattatc ccaggatttt ttggcgtatc tcatgatgga
     7321 tatatagtta catttccacg tggcggatca gatataactg gcgccatcat atcaagtggt
     7381 gttagagcta caatttatga aaatttcacc gatgtgtctg gtatttataa agctaatcca
     7441 aatatcatca aagatcctga attaatcgaa gaaatcactt atcgagaaat gcgtgaatta
     7501 tcttatgctg gttttagtgt tttccatgat gaagccttac aaccacttta taaagatcgc
     7561 atccctgtgg tgattaaaaa tacgaaccgc cctcaagata aaggtacatt tatagtgcat
     7621 gatagagaaa taaatgcgaa aaatgtgatt agcggtataa gttgtgataa agattttacc
     7681 gttattaata tcaaaaagta tttaatgaat agacaagtcg gctttactag aaagatatta
     7741 ggtgtcttag aggataataa tatttcattt gatcatatgc cttcaggtat tgatactatc
     7801 agtatcgtta tgcgttcaaa acaaattcaa aataaagaaa caaaagtatt aaatgaaatt
     7861 cgtcaaaaat gtgatgttga tgagctaagt attgagcatg atttagcaat tttaatgatt
     7921 gtcggcgaag gtatgaataa agtcattggt actgcaaata aaattacaca tgccttagct
     7981 gaatcaaaaa ttaacttaaa aatgattaac caaggtgctt cggaaatctc gatgatgttt
     8041 ggaattcatg tagatgatgc tgaaaaagct gtattatcta catatgagtt ttgctatcac
     8101 ggggttgcat taaaaaactt gtgtgataaa aactaaaata aaagcaattc gtaacacatg
     8161 tattcaactg cgttatgaat tgctttttct taattattta ttgtcctctg gattgcatcc
     8221 ttaatacgtt tctcacctac tacaaatttt aaaataaaaa attgatagta gcttaatgca
     8281 tctatgactc gtttataatt ggaataatga tgatactgat ggtgttgcat tagatcatac
     8341 attagaacga tctccggttt aatataatcc acatcccaat ttaaactatg gaagtatatg
     8401 ttactcttag gtatacgtat attcggatcc aatctaaaaa tccattcatc gtttactaca
     8461 tcataaacga aaatactcat tattgttgta tcatcatatt gcacataaac ttttgcaatt
     8521 tttgaaagtg ataaatcttc tttagctatt gcttgatctt gcttatctat gtatagtaac
     8581 gcatatgatt gcggaataac tttcacaata tcacttaaac gcttacgttc cacgcatatt
     8641 tcaacaatag aaggtaattt taattcatca tttaagaaaa gctgcatggc aacttcaccg
     8701 tgaaatttaa ataattgcga tgatgttttc attaaattgt ccactaattg ttctttagca
     8761 ttcatttcat tcactctcaa atacacctcc taagcaagcg ctttcacaaa tatcattata
     8821 cattttaaaa ttaatgaatt caatcttcaa aatactatga gtgacctaat tctgtcattt
     8881 aaatgaccgt tataacataa attcgacata aacttgaatt cacgaatctt tcacgtcata
     8941 ttcattgaac atcaatatct gtcagtttat aatttgatta taacaatgat gaactaaaat
     9001 caactaataa aaatgtggga aattgaataa caattaatct ttattaatta ttattgtata
     9061 caaagttaaa gaagtcaaaa aggattggtg aaaaaatgtc tttttatgtt gtacttatca
     9121 ttatcattgt agcattaatt ggtatattag ttttaaatca aaggtatagt aatagtaaaa
     9181 tagataccga agtttatgca agaaagcaac ttattaaaaa gaacaaagca ttaagtgcag
     9241 aaaatgctga attaagaagt caaatgctga gttctaataa tgatgttggc caccatgcat
     9301 acaaaaatgc taaaagagaa ttacgcaaga ttttagatag ctacctcgaa aatggtaaat
     9361 taaaatatta cgatattatc gttacaagca atttagctac taaacatccg tttttcgagt
     9421 atgcacgttc atttgatttt atcattgttt cagatatcgg tttaataaac gttgatgtaa
     9481 aaagctgggg tgaaaaaaca ttttatcact ttgatgtacc tgatgagcat gatacagaaa
     9541 tgagcaatag taatattgaa aaagttgtcg gtcattacat tagccagcaa tatcatgatc
     9601 agtttaattc atcaagaaag tctatctata cttttacaga aacagttcaa ccaaatcgtg
     9661 ttatttatga tttttatgat tatgatccgt atcaattagc agcaaataat gctaaagcat
     9721 taaaggatca tattgaacaa aactttaact ttaaagtcca aagtaccggt gttatttact
     9781 ttagtgatgg tacagttaat atcattcaag gttctgaaga aagagataaa tatgttgata
     9841 cagtttcaac aaaatcttcg ttacgacgta ttattagcga agccatagag ctatctaaac
     9901 accctttaaa taaagaacag gttgatcaaa ttacagctat attcaagtaa aatcaaaggc
     9961 ataataatcc attacgctcg atacgcacta tggttattat gcctttaaat tatttctata
    10021 tataaattta tggtaataat aaatcgatg
//
LOCUS       DALMNS010000099         9908 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.099, whole genome shotgun sequence.
ACCESSION   DALMNS010000099 DALMNS010000000
VERSION     DALMNS010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9908)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9908)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9908
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.099"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            128..1336
                     /gene="gltS"
                     /locus_tag="O6Y56_002166"
     CDS             128..1336
                     /gene="gltS"
                     /locus_tag="O6Y56_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HDB5575411.1"
                     /translation="MIELNAITTLCLACILYLLGKAIVNHVNFLKRICIPAPVIGGLI
                     FAILVAALDSFGMVKIKLDASFIQDFFMLAFFTTIGLGASLKLFKLGGKVLLLYFMFC
                     AIISVIQNIVSVSLAKVLNIKPLLGLTAGSMSMEGGHGNAAAYGKTIQDLGIDSALTA
                     ALAAATLGLVFGGLIGGPVVKFLIKRYNLKPQHSDDTFKDYSQVAYNEHLHSKFNATE
                     VFFIQFTIVVFCMAVGSYFSHLFTAQTGINVPIYVGSLFVAVIVRNISESFNFNIVDL
                     KITNQIGDVALGIFLSLALMSIQLIEIYKLAIPLIIIVLVQVVVMILFAVLILFRGLG
                     KDYDAAVMVGGFIGHGLGATPNAMANLDVITKKYGNSPKAYLVVPIVGAFLIDLIGVI
                     VIMGFIQWFS"
     gene            complement(1384..2433)
                     /locus_tag="O6Y56_002167"
     CDS             complement(1384..2433)
                     /locus_tag="O6Y56_002167"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HDB5575412.1"
                     /translation="MSDFQREQRKNEHVEIAMAQSDAMQSDFDKMRFVHHSIPSINVN
                     DIDLTSQTPDLTMAYPVYINAMTGGSEWTKNINEKLAVVARETGLAMAVGSTHAALRN
                     PRMAETFTIARKMNPEGMIFSNVGADVPVEKALEAVELLEAQALQIHVNSPQELVMPE
                     GNREFVTWLDNIASIVSRVSVPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNF
                     VDIENERRANKDMDYLSSWGQSTVESLLETTAYQSEVSVFASGGLRTPLDAIKSLALG
                     AKATGMSRPFLNQVENNGIAHTVAYVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPE
                     ILSWIEQRNLNIHRG"
     gene            complement(2464..3411)
                     /gene="corA"
                     /locus_tag="O6Y56_002168"
     CDS             complement(2464..3411)
                     /gene="corA"
                     /locus_tag="O6Y56_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HDB5575413.1"
                     /translation="MALTIRYQTTYEPFKVVDDIKEIPKDATIVWYDFDEPNEQENEW
                     FKAHFNFNDLEVDDAINGMPRAKYKSYKDYQYLVFHSIMGSNYSPIALNIFIQDNVLV
                     TYHHQTLESLNKVVYKYMNALDAELDCADVVILILDMMVDKYFNFVYALEDSVYHFED
                     RHVDDRFNKMVMDSVFKLRSDLIKVKRVLFPMQELIDTMKQNGDLIIDNKHSLYIQHI
                     DDHLIKQRNIIRTAQEMTNEIRENFESYTSFRMNSIMQVLTLVSVIFSPLTFIAGIYG
                     MNFVNMPALHLHYGYYICLAVMFVIAVVLIIFFRRKKWF"
     gene            3508..3999
                     /locus_tag="O6Y56_002169"
     CDS             3508..3999
                     /locus_tag="O6Y56_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HDB5575414.1"
                     /translation="MVIIKQLFTHTQTVTSEFIDHNNHMHDANYNIIFSDVVNRFNYS
                     HGLSLKERENLTYTLFTLEEHTTYLSELSLGDVFTVTIYIYDYDYKRLHLFLTLTKED
                     GTLASTNEVMMMGINQHTRRSDAFPESFSTQIAHYYKNQPTITWPEQLGHKIAIPHKG
                     ALK"
     gene            3996..4415
                     /locus_tag="O6Y56_002170"
     CDS             3996..4415
                     /locus_tag="O6Y56_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575415.1"
                     /translation="MTDALQQKIHIELLDLLDDVKFELTELNAQKGLYINGPANQLLK
                     RGVHMAYVQGQKQAIDNIMTIVEQQLEDQHFLEHYDKFQNEVAHRNYDKTANFAELSD
                     IPRQFDNFLDQFYQIKGQYFIITHINTLIGDFHSEAH"
     gene            complement(4523..5443)
                     /locus_tag="O6Y56_002171"
     CDS             complement(4523..5443)
                     /locus_tag="O6Y56_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000620861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDB5575416.1"
                     /translation="MIRNRVMNSVVNKYLLHNRSIMFKNDQDVERFFYKREIENRKKH
                     KQPSTLNVKANLEKLSLDDMQVFRFNFRHQIDKKILYIHGGFNALQPSPFHWRLLDKI
                     TLSTLYEVVLPIYPKTPEFHIDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALS
                     FVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEIMKKWANG
                     LPLTDKRISPINGTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMV
                     HDFPIYPIRQSHKAIKQIAKSIDEDVTQNN"
     gene            5651..6289
                     /locus_tag="O6Y56_002172"
     CDS             5651..6289
                     /locus_tag="O6Y56_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575417.1"
                     /translation="MTNPNQRLEPFDETFQQPNIHRGKRYGKKKRSLVSMIIQIIVVI
                     LTAIAGYSMWKQPIFNIVFTKESVDFDGIKNFNETIGKMHQLNINLGNINDLQQGIDR
                     LILVFNGFFILCIVSLVITILTIVFNRTVLKVVNILVLTIMLVITLYFSYIIKALAQE
                     IADALKKYYLNVPPDQVITEADAIHNGIILLGCSIGLLVISLFFRNRMPRLK"
     gene            complement(6540..8471)
                     /locus_tag="O6Y56_002173"
     CDS             complement(6540..8471)
                     /locus_tag="O6Y56_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HDB5575418.1"
                     /translation="MTTAFIISYIVLALIIVGVINLLLIRSRRKAKRQQKEQHFATRQ
                     SNQSKFKASDLDRTTDQSSQHSAREEARIDNKDNQNQISLTDHAKGSEQDQELFNDNK
                     DDEAFAAKNPDSEEYKVNEKIKKEHTNYIFGEGVSRGKILAALLFGMFIAILNQTLLN
                     VALPKINTEFNISASTGQWLMTGFMLVNGILIPITAYLFNKYSYRKLFLVALVLFTIG
                     SLICAISMNFPIMMVGRVLQAIGAGVLMPLGSIVIITIYPPEKRGAAMGTMGIAMILA
                     PAIGPTLSGYIVQNYHWNVMFYGMFIIGIIAILVGFVWFKLYQYTTNPKADIPGIIFS
                     TIGFGALLYGFSEAGNKGWGSVEIETMFAIGIIFIILFVIRELRMKAPMLNLEVLKFP
                     TFTLTTVINMVVMMSLYGGMILLPIYLQNLRGFSALDSGLLLLPGSLIMGLLGPFAGK
                     LLDTIGLKPLAIFGIAVMTYATWELTKLNMDTPYMTIMGIYVLRSFGMAFIMMPMVTA
                     AINALPGRLASHGNAFLNTMRQLAGSIGTAILVTVMTTQTTQHLSAFGEELDKTNPVV
                     QDHMRELASQYGGQEGAMKVLLQFVNKLATVEGINDAFIVATIFSIIALILCLFLQSN
                     KKAKATAQKIDADNSINHE"
     gene            complement(8484..9131)
                     /locus_tag="O6Y56_002174"
     CDS             complement(8484..9131)
                     /locus_tag="O6Y56_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HDB5575419.1"
                     /translation="MKKMILINVITVVVLLAIGIAGFYFWNKTTSYITTDNAKVNGDQ
                     IKIASPASGQIKSLNVKQGDKLDKGDKVATVTVQGQDGETKDMELKMPQKGTIAKLDG
                     MEGSMVQAGNPIAYAYNLDDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASVKGKVDS
                     IGKATAASFSLMPSSNSDGNYTKVSQVIPVKITLDSEPSKQVVPGMNAEVKIHKN"
     gene            9252..9806
                     /locus_tag="O6Y56_002175"
     CDS             9252..9806
                     /locus_tag="O6Y56_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001661235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDB5575420.1"
                     /translation="MKRQAKIEIQNALVDLMAEYPFQEISTKMICAYCNINRSTFYDY
                     YKDKFDLLDTINSKHKEKFQFLLSALHHNFENIKQDKLKLYKFFIIIAKYIKHNEQFF
                     KDILVTYPMKTLFIDYINLARDYYQQIMNDYSTTVTNKQLYVTYIIGGQAGVFINWLS
                     NGCNESPEEVADILLANTIKLQNQ"
BASE COUNT         3267 a         1748 c         1453 g         3440 t
ORIGIN      
        1 ttgatattat tttcaaaaac tagaaatatt gatttgttgc atgtataatg ttaaaagtgc
       61 ccttttataa cgcttacata taaaagctta tttagggaga gggatattca acaaggggga
      121 tttgaaaatg atagaactta atgcaattac aacattatgt ttagcctgta tactttactt
      181 acttggtaaa gctatcgtta atcacgttaa ttttttaaaa cgcatttgta taccagcacc
      241 agtgattggc ggcttaatct ttgctatttt agttgcggct ttggattcat ttggcatggt
      301 taagattaaa ttagatgctt cattcattca agatttcttc atgttagcat tctttacgac
      361 aatcggtctt ggtgcatcat tgaaattatt taaattaggt ggcaaagtct tgctattata
      421 ctttatgttt tgtgctatca tttcagtcat tcaaaacata gttagtgtat cactagcaaa
      481 agtattaaat attaaaccgt tactaggatt aacagctggt tctatgtcta tggaaggtgg
      541 tcacggtaat gctgccgctt atggtaagac aatccaagat ttaggcattg actcggcact
      601 gacagcggct cttgcagctg caactttagg tcttgtattt ggagggctta tcggtggacc
      661 agttgtaaaa tttttaatca aacgttataa cttaaagcct caacatagtg acgatacatt
      721 taaagattat agtcaagtag catataacga acatttacat agtaaattta atgccactga
      781 agtattcttc attcaattta caatcgttgt attctgtatg gcagttggaa gttatttcag
      841 tcatttgttt acagctcaaa cagggattaa tgttccaatt tacgttggct cattatttgt
      901 agctgttatt gtccgaaata tctctgaaag ttttaatttt aatattgtag atttaaaaat
      961 tactaatcaa attggcgatg tcgcattagg tattttctta tctcttgcgc taatgagcat
     1021 tcaattaatc gaaatttata aacttgctat acctcttatt attatcgttt tagttcaagt
     1081 tgtcgttatg attttatttg ctgttttaat tttatttaga ggtttaggaa aagattatga
     1141 tgctgcagta atggtaggtg gttttatcgg gcatgggctt ggtgcaacgc caaatgccat
     1201 ggcaaattta gatgttatta ctaaaaaata tggaaactca cctaaagcat atttagttgt
     1261 acctattgtt ggtgcattct taatcgattt aattggtgtt atagtcatta tgggattcat
     1321 tcaatggttt agttaaacac caaactcata aataaaagag gaggccttcg cctcctcttt
     1381 tatttatcct cgatgtatat tcaagttacg ttgttctatc catgacaata tttccggact
     1441 aaatacgatt tgtttttgtg ttaagtcgtc aatattttta gcatctaaca tcgtcattat
     1501 tgatttcatg tgttcaataa atgattctac ataagctact gtatgtgcaa tgccattatt
     1561 ttcaacttga tttaaaaacg gacgtgacat accagttgcc tttgcaccaa gtgctaaact
     1621 tttaattgca tcgagtggtg tacgtaaacc accactcgcg aaaactgaaa cttcgctttg
     1681 ataagccgtt gtttcaagta atgactcaac tgtagactgt ccccatgatg ataagtaatc
     1741 catatcttta tttgcacgac gttcattttc aatatctaca aagttagtac cacctttgcc
     1801 actaacatcg acatacttaa cgcctatttg ttgtaagtca tgcattaatt ctttgctcat
     1861 accaaatcca acttctttta taatgactgg aacagacact cgtgatacaa tcgacgctat
     1921 attatctaac caagtcacaa attcacgatt cccttcaggc ataactaatt cttgaggaga
     1981 attaacatgg atttgtaacg cttgtgcctc aagtaattca actgcttcca aagccttttc
     2041 tactggtacg tccgcaccaa cattgctaaa aatcatgcct tcaggattca tttttcgcgc
     2101 aatcgtaaac gtctcagcca tgcgtggatt tctcaatgcc gcatgtgttg acccaactgc
     2161 catcgctaag ccagtttctc ttgcaactac agctagcttt tcattgatgt ttttcgtcca
     2221 ctcgctacca cccgtcattg cattaatata aaccggatat gccatcgtta agtcaggcgt
     2281 ctgtgatgtc aaatcgatat catttacatt aattgatggg atagaatgat gcacaaaacg
     2341 catcttatca aaatctgatt gcattgcgtc agattgagcc attgctattt caacatgttc
     2401 attttttctc tgttctcttt ggaaatcact catgattaaa cctacctttt cgtcatttct
     2461 aatttaaaac cattttttac gtctgaaaaa gatgattaat acgacagcta taacaaacat
     2521 tacagctaag caaatataat atccataatg taaatgtaat gccggcatat ttacaaagtt
     2581 cataccataa atcccagcta tgaatgttaa cggtgaaaat ataactgata ctaacgttaa
     2641 tacttgcata atactattca ttctaaatga cgtgtatgac tcaaaatttt ctcgtatttc
     2701 gtttgtcatt tcttgagcag tacgaatgat attacgttgc ttaatcaagt ggtcatcgat
     2761 atgttgaatg tatagcgaat gtttattatc tataatcaaa tcaccatttt gtttcattgt
     2821 atcaattagc tcttgcatag gaaacagtac acgttttact ttaatcaaat ccgaacgtaa
     2881 cttaaagaca ctatccatga ccattttatt aaagcgatca tctacatggc ggtcttcaaa
     2941 atgataaaca ctatcttcaa gtgcatatac aaagttgaaa tatttatcaa ccatcatatc
     3001 taaaattaat ataacgacat ctgcacaatc taattctgca tctaatgcat tcatatactt
     3061 atagactact ttatttaatg attccaacgt ttgatgatga tatgttacta atacgttgtc
     3121 ttgtataaaa atatttagtg ctattggtga atagtttgac cccataatac tatggaatac
     3181 taagtattga taatctttat aagatttata tttagctcgt ggcataccgt taattgcatc
     3241 atccacttct aaatcattaa aattaaaatg tgctttaaac cattcatttt cttgttcatt
     3301 cggttcatca aaatcatacc aaacaatagt cgcatctttt ggtatctctt tgatatcatc
     3361 aactacttta aaaggttcat atgtagtttg ataccgtatc gttaaagcca tcgatactcc
     3421 ccctaaataa cgaattctct attattttat catgaattaa ataacgtgta tgtcttaatt
     3481 tattttagta tgatagtcac taaggagatg gttattatca aacaactttt tacacatact
     3541 caaaccgtaa catctgaatt cattgaccat aacaatcata tgcatgatgc aaattataat
     3601 atcattttta gtgacgtcgt gaatcgtttt aattacagcc acggtctttc tttaaaagaa
     3661 cgcgaaaatt taacatatac gctatttaca ctagaagaac atacgacata cctctcagaa
     3721 ttgtctcttg gcgatgtatt tactgttact atatatattt atgattacga ttataagcgg
     3781 ttgcatttat ttttaacatt aactaaagaa gatggtacac tagcatcaac aaacgaagta
     3841 atgatgatgg gaattaatca gcacacacgt cgttctgatg cttttcctga atcattttca
     3901 acacaaatag cacactatta taaaaatcaa ccaactatca cttggcctga acaattagga
     3961 cataaaatag caattccaca caaaggagca ttaaaatgac agatgcatta caacaaaaga
     4021 ttcatatcga attactagat ttattagatg atgttaagtt tgaattaaca gaattaaatg
     4081 cacaaaaagg gttatacatt aacggaccag caaatcagct acttaagcgt ggcgtgcata
     4141 tggcttatgt tcaaggacaa aagcaagcta tcgataatat tatgactatt gtggaacaac
     4201 agcttgaaga tcaacatttc ctagaacatt atgataaatt tcaaaatgag gttgctcatc
     4261 gcaattatga taaaacagct aactttgcag aacttagtga tattccacgt caattcgata
     4321 attttttaga tcaattttat caaattaaag ggcaatactt tatcatcaca catatcaata
     4381 cacttattgg tgattttcac tcagaagctc attaacaatt agtctatata atccttgcta
     4441 tattttcaaa aacaaaaccc aattgcgttt tcatgtcaaa tatcatcttc catgaaatcg
     4501 taactgggtc aattgtatgt tattagttat tttgtgttac atcctcatct atcgatttgg
     4561 caatttgttt aatagcttta tgtgattgtc taattggata aattggaaaa tcatgtacca
     4621 tcttaggata atcataaaac tcaatgtatt gatgatgttg caacatcatt tgttcgaata
     4681 gcttcatatc aggatgtgtc atttcacgtc caccaccaaa catataaact ggtggtaatc
     4741 cttctattgt gccattaatt ggcgatatgc gcttatctgt taatggtaga ccattcgccc
     4801 attttttcat aatctcattg acaccaaact gacttagaac cgcatcttgt tcgattaaag
     4861 cgtctgaaat atctttatta gatagtgttg catctaaaat tggtgagatt aaatacaatt
     4921 tattcggtaa tggctgttga ttgtctaaaa gagattgtac aaaggataat gccagtgcac
     4981 cacctgaacc atcacccatg actacgacat tttgatggcc tacttcagat actaattgat
     5041 cataaacacg ttgtatcgct tggaaagtgt cgtcaatatg aaactctggt gtctttggat
     5101 agataggcag tacaacctca tataatgtac ttaaagtgat cttatccaac aatctccaat
     5161 ggaacggtga tggttgtagt gcattgaatc caccgtgaat atataaaatt ttcttatcaa
     5221 tttgatgtct gaaattaaag cgaaagactt gcatatcatc taatgataat ttttctaaat
     5281 ttgctttaac atttaatgtt gaaggctgct tatgtttttt tctattttca atttctcttt
     5341 tataaaaaaa tctttcaaca tcttgatcat ttttaaacat aatcgagcga ttgtgaagca
     5401 aatatttatt gacaacgcta ttcataacac ggtttctaat caatgtctta acctaccttt
     5461 atatatttta tgtatccaat gattgtctat cccctacatt ctttgccaaa aaaagtatat
     5521 aatgtagaag atattttctt tttcactttc aaatttaaga ctacaattga acagtgattt
     5581 ttcatcatta taacagacaa ctagacatat tgataagtaa agaaaagaac tttatacgga
     5641 ggtaccttgc atgacaaacc caaatcaacg attagaacca tttgatgaga catttcaaca
     5701 accgaatatt catcgtggta agcgatatgg taagaaaaaa cgttcattgg taagcatgat
     5761 tattcaaatc attgttgtta tattaaccgc aatcgctgga tacagcatgt ggaaacaacc
     5821 catttttaat attgtcttca ccaaagaatc tgtagatttt gatggcatta aaaattttaa
     5881 cgagacaatt ggaaaaatgc atcaattaaa tattaatttg ggtaatatca atgatttaca
     5941 acaaggaatc gatcgcttaa ttttggtctt taacggtttc tttattttat gtatcgttag
     6001 cctagtcata acaatactga caattgtatt taatcgcaca gttctaaaag tggtaaatat
     6061 tttagtgtta acaattatgt tagtcattac attgtatttc agttatatta ttaaagcact
     6121 cgcacaagaa attgcagatg ctttaaaaaa atattattta aatgtaccac cagatcaagt
     6181 aataacagaa gctgacgcta ttcataacgg catcatttta ctgggctgta gcatcggttt
     6241 acttgttata agcttattct tccgtaatcg catgcctcgt ttaaaataat gttatatagt
     6301 agggattggg acagaaatgt tattttcaca aaattcattt cgttgaccca cttcctgctt
     6361 tttctttatt aataacctac tacgtcaatg ccaaatttta atataattcc tctaacattc
     6421 tacaaatcaa caaataaaaa aagtatcgat aaccatatat tggcaccgat actttaaaaa
     6481 tcatgtcccc acaacataat ttttgattag tcacacttca attaattaat ttattttatt
     6541 tattcatgat tgatactatt atctgcatct atcttttgag ccgtagcttt tgcttttttg
     6601 ttactttgta aaaataagca taaaattaaa gcaatgatgc taaatatcgt tgcaactata
     6661 aatgcatcat taatcccttc aactgttgct agtttattta caaattgtaa taacactttc
     6721 attgcgcctt cttgaccacc atattgcgat gctaattcac gcatatgatc ttgtacaaca
     6781 ggattcgttt tatctaactc ttccccaaaa gctgataaat gttgtgtagt ttgcgttgtc
     6841 attacagtaa ccaagatcgc tgttcctata gaaccagcta gttgacgcat cgtatttaag
     6901 aaggcattac catgggaggc aagtcgtccc ggcaacgcat taatagctgc tgttaccatt
     6961 ggcatcataa taaatgccat accaaatgaa cgtagtacat agatgcccat gattgtcata
     7021 tatggcgtat ccatattcaa tttagttaat tcccatgttg cataagtcat gacagcaata
     7081 ccaaaaatgg ctaaaggttt taagccaatc gtgtctaaca acttaccagc aaatggccct
     7141 agtagaccca taattagaga accaggtaat aataacaatc cggaatctaa tgctgagaaa
     7201 ccacgtaaat tttgtaagta aattggtaat aaaatcatac ccccatacaa gctcatcatt
     7261 acaaccatat taattactgt tgttagtgta aatgttggaa atttcaatac ttctaaattc
     7321 aacattggtg ctttcattct taattctctt attacaaata gaataataaa gataatacca
     7381 atcgcaaaca ttgtttctat ctcaacagaa ccccagcctt tgttccccgc ttctgaaaag
     7441 ccgtataaca aagcaccaaa accaattgta ctaaaaatga tacctgggat atcagcttta
     7501 ggatttgtag tatattgata taacttaaac catacaaaac caactaagat tgcaataatt
     7561 ccgataatga acataccgta aaacatcaca ttccaatggt aattttgtac aatatagcct
     7621 gataatgttg gaccgattgc aggtgctaaa atcattgcga tacccattgt acccatggca
     7681 gcaccacgtt tttcaggtgg ataaattgta ataataacaa ttgaacctaa tggcattagt
     7741 acacctgcac caatagcttg taatacacgt ccaaccatca tgattgggaa attcattgaa
     7801 atcgcacata ttaatgaacc aattgtaaag agtactaacg caactaaaaa taattttcga
     7861 tatgaatatt tattaaatag atacgccgta attggtatta aaataccgtt tactaacatg
     7921 aatcccgtca tcaaccattg ccctgttgac gcagaaatat taaattccgt attaattttt
     7981 ggcaaagcaa catttaataa tgtttggttt aaaatcgcaa taaacatacc gaataataat
     8041 gccgctaata ttttaccgcg tgaaacacct tcaccaaaaa tataatttgt atgttctttt
     8101 ttaattttct catttacttt gtattcttca gaatcaggat ttttagcagc aaatgcttca
     8161 tcatccttat tatcattgaa taattcttga tcttgttcag accctttcgc atgatcagtt
     8221 agactaattt gattctgatt atctttattg tcaatacgcg cctcttcacg cgctgaatgt
     8281 tgtgacgatt gatcagttgt tctgtctaaa tcacttgctt taaatttaga ttgatttgat
     8341 tgacgtgtcg caaaatgttg ttccttttgt tggcgttttg cttttcttct tgatcttatt
     8401 aataataaat tgataacccc aacaataatg agcgctaaaa caatgtagct aataatgaag
     8461 gccgtagtca tttaatgacc cccttaattt ttatgaattt ttacttcagc gttcattcca
     8521 ggaacaactt gtttagacgg ttctgaatct aacgtaattt taacaggtat aacttgagat
     8581 actttagtat agttaccatc actatttgat gatggcatta atgaaaaact agcagcagta
     8641 gcttttccaa tactatcaac tttaccttta acagaagctt tttgaccgtc aatagtcaca
     8701 tcaacatctt taccaacttc aacatcttta atgtcttttt cgtcaatatt tgcagttaca
     8761 tataaatcat ctaaattgta agcataagca attggattgc ctgcttgtac catagaacct
     8821 tccatgccat ctaatttagc aattgtacct ttttgtggca ttttaagttc catatcttta
     8881 gtttcgccat cttgaccttg aacagtaact gttgctactt tatcaccttt atcaagttta
     8941 tcaccttgct taacatttag tgatttgatt tgcccagaag ctggacttgc tattttaatt
     9001 tgatcgccat ttactttagc attatcagtt gttatataac ttgttgtttt attccagaaa
     9061 taaaaaccag caatcccaat tgctaacagt acaacaaccg taatgacatt aattaatatc
     9121 atctttttca tgaaacattt cctcctattt gcttttaaaa ttcactttat ttattataga
     9181 gacatgataa ctaaaaaaac accaacaatt tttataagag tgttggttaa aattcacaaa
     9241 ggtgtaacaa tatgaaacga caagccaaaa tagaaattca aaacgcactt gttgatttga
     9301 tggctgaata tccttttcaa gaaatatcca ctaaaatgat ttgcgcgtat tgtaatatta
     9361 atcgttctac tttttatgat tattacaaag ataaatttga tttattggat accatcaact
     9421 caaagcataa agaaaaattc caatttcttc taagcgcgct acatcataat ttcgaaaata
     9481 ttaaacagga taagcttaaa ctttataaat tcttcattat tattgctaag tatatcaagc
     9541 acaatgagca gtttttcaaa gacattttag ttacctatcc aatgaaaaca ttattcatag
     9601 actatataaa tttagcgaga gattactatc aacaaattat gaatgactat agtactacag
     9661 taaccaataa acagctttat gttacatata tcataggcgg tcaagctgga gtatttatta
     9721 attggctttc gaatggttgt aatgaatcac ctgaagaagt tgctgacatt ttattggcta
     9781 atacgattaa acttcaaaac caataatacg gtttcattct aataaagaaa tgctataaaa
     9841 caactagata aagttaaacc aaatggacag ataatagtac atatgtaacg gtgctatcaa
     9901 aataaaaa
//
LOCUS       DALMNS010000100         9884 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.100, whole genome shotgun sequence.
ACCESSION   DALMNS010000100 DALMNS010000000
VERSION     DALMNS010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9884)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9884)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9884
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.100"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..286
                     /gene="lrgA"
                     /locus_tag="O6Y56_002176"
     CDS             <1..286
                     /gene="lrgA"
                     /locus_tag="O6Y56_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="antiholin-like murein hydrolase modulator LrgA"
                     /protein_id="HDB5575421.1"
                     /translation="LCTGAVKLGEVEKVGTTLTNNIGLLFVPAGISVVNSLGVISQAP
                     FLIIGLIIVSTILLLICTGYVTQIIMKVTSRSKGDKVTKKIKIEEAQAHD"
     gene            279..980
                     /gene="lrgB"
                     /locus_tag="O6Y56_002177"
     CDS             279..980
                     /gene="lrgB"
                     /locus_tag="O6Y56_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antiholin-like protein LrgB"
                     /protein_id="HDB5575422.1"
                     /translation="MINHLALNTPYFGILLSVIPFFLATILFEKTNRFFLFAPLFVSM
                     VFGVAFLYLTGIPYKTYKIGGDIIYFFLEPATICFAIPLYKKREVLVKHWHRIIGGIG
                     IGTVVALLIILTFAKLAQFANDVILSMLPQAATTAIALPVSAGIGGIKELTSLAVILN
                     GVIIYALGNKFLKLFRITNPIARGLALGTSGHTLGVAPAKELGPVEESMASIALVLVG
                     VVVVAVVPVFVAIFF"
     gene            complement(1088..1792)
                     /locus_tag="O6Y56_002178"
     CDS             complement(1088..1792)
                     /locus_tag="O6Y56_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDB5575423.1"
                     /translation="MLKYEHIAKQLNAFIHQSNFKPGDKLPSVTQLKERYQVSKSTII
                     KALGLLEQDGLIYQAQGSGIYVRNIADANRINVFKTNGFSKSLGEHRMTSKVLVFKEI
                     ATPPKSVQDELQLNADDTVYYLERLRFVDDDVLCIEYSYYHKEIVKYLNDDIAKGSIF
                     DYLESNMKLRIGFSDIFFNVDKLTSSEASLLQLSTGEPCLRYHQTFYTMTGKPFDSSD
                     IVFHYRHAQFYIPSKK"
     gene            1941..2732
                     /locus_tag="O6Y56_002179"
     CDS             1941..2732
                     /locus_tag="O6Y56_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HDB5575424.1"
                     /translation="MSNKYKDQAQDILTAVGGVENIVDVTYDTKCITIHMQHTIPSTA
                     NEVKQIVDVTSVAENDAQLVIKLNENVDEVYQQLQRLIKNAIVEKDANTDNINSQDTS
                     YTPQVKVTTPILVKAPIAGRRILLKEVRDSIFREKMVGEGLAIKAHEESKVIAPVNGL
                     ISMIVPTKHAVGIQSEDGVDIVIHIGVNTVDLEGKGFKCFVKQNDRVEAGQTLLQFDQ
                     QYIQQQGYNADVIVVISNSADLGKVELTMNEIITTEDVIFKIFKN"
     gene            2748..4184
                     /locus_tag="O6Y56_002180"
     CDS             2748..4184
                     /locus_tag="O6Y56_002180"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HDB5575425.1"
                     /translation="MTKLPQNFMWGGALAANQFEGGYDKGGKGLSVIDVMTSGAHGKA
                     RQITESIDPNHYYPNHEGIDFYHRYKEDIALFKEMGLKCLRTSIAWTRIFPNGDEDVP
                     NEEGLAFYDRIFDELIAQGIEPVVTLSHFEMPLHLAKHYGGFRNREVVDYFVHFARVV
                     FERYKDKVTYWMTFNEINNQMDTSNPIFLWTNSGVALTENDNPEEVLYQVAHHELLAS
                     ALAVRLGKEINPKFKIGTMISHVPIYPYSCHPKDMMEAQIANRLRFFFPDVQVRGYYP
                     SYAKKMLARKGYDVGWQEGDDSILQQGTVDYIGFSYYMSTAVKHDVNTTVENNIVNGG
                     LNHSVENPHIATSDWGWAIDPDGLRYTLNVLYDRYQLPLFIVENGFGAVDEVVDGHIH
                     DDYRIEYLKAHITAAIEAVDQDGVDLIGYTPWGIIDIVSFTTGEMKKRYGLIYVDRDN
                     DGHGTMERLKKDSFYWYQQVIASNGDKL"
     gene            complement(4641..5402)
                     /locus_tag="O6Y56_002181"
     CDS             complement(4641..5402)
                     /locus_tag="O6Y56_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDB5575426.1"
                     /translation="MSKEAGHTFLAKLGKTRLRPGGKEATDWLIQQGAFSQDKQVLEV
                     ACNMCTTSIYLAHTYGCHIQGVDINKKALEKAQENISAAGLESYIQVQQANAAKLPFD
                     DNQFDIVLNEAMLTMLPIAIKEKALREYYRVLKPGGILLTHDIVIVNESHATHVVKSL
                     SAAINVNVSPQTKLGWLDLYHQAGFNHVHYHTGPMSLMTPKGLIYDEGIVGTIKIINN
                     AFKKENRPMFCKMFKTMTKLRKDMNYITFVAKKEH"
     gene            5421..5555
                     /locus_tag="O6Y56_002182"
     CDS             5421..5555
                     /locus_tag="O6Y56_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575427.1"
                     /translation="MIIIIINIAYLYTIIWKLKRLQKIVTSFITKHESSSIGLVENYF
                     "
     gene            complement(5653..6567)
                     /gene="rbsK"
                     /locus_tag="O6Y56_002183"
     CDS             complement(5653..6567)
                     /gene="rbsK"
                     /locus_tag="O6Y56_002183"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HDB5575428.1"
                     /translation="MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGA
                     NQAIATARMQADTTFITKIGTDGVADFILEDFKAAHIDTSYIIKTTEAKTGQAFITVN
                     AEGQNTIYVYGGANMTMTPEDVINAKDSIINADFVVAQLEVPIPAIISAFEIAKAHGV
                     TTVLNPAPAKALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKT
                     VLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAID
                     FGNKASSLTVQKHGAQASIPLLEEVNQV"
     gene            complement(6595..6999)
                     /gene="rbsD"
                     /locus_tag="O6Y56_002184"
     CDS             complement(6595..6999)
                     /gene="rbsD"
                     /locus_tag="O6Y56_002184"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HDB5575429.1"
                     /translation="MKKSAVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAV
                     TKNLPRFIDVLATVLEEMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPHEEM
                     KSNLAHPLNKGNIRTGETTPYSNIALESNVTF"
     gene            complement(7014..7895)
                     /gene="rbsU"
                     /locus_tag="O6Y56_002185"
     CDS             complement(7014..7895)
                     /gene="rbsU"
                     /locus_tag="O6Y56_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose transporter RbsU"
                     /protein_id="HDB5575430.1"
                     /translation="MSIVALLIGLGPLIGWGFFPTVASKFGGKPVHQIIGATVGTLIF
                     AIILAVVTSSGFPTGTNLLFALLSGAGWGFGQIITFKAFELVGSSRAMPVTTAFQLLG
                     ASLWGVFALGNWPGIGHKIIGFTALVVILIGARMTVWSERKEASNAKNLRRAVILLLI
                     GEFGYWLYSAAPQATSIDGLTAFLPQAMGMVIVAVIYGFMNMKAENPFRNKITWLQII
                     SGFFFAFGALTYLISAQPNMNGLATGFILSQTSVVLATLTGIYFLKQHKTSKEMIITI
                     IGLVLILVAASVTVFIK"
     gene            complement(8127..9125)
                     /locus_tag="O6Y56_002186"
     CDS             complement(8127..9125)
                     /locus_tag="O6Y56_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDB5575431.1"
                     /translation="MKKVSIKDVAREAGVSVTTVSHILNHNDSRFSATTIKNVHAVSE
                     RLGYAPNKHAKQLRGSKIQTIGVILPSLTNPFFSALMQSIHDHKPSDVDLCFLTSTAT
                     DLYDNIKHLIERGIDGLIIAQYISSPDVLNNYLKKHHVPYVVLDQNDHQGYTDFVRTN
                     EYQGGQLAAQHLIELGHNNMMIVAPYDMMANMSTRVAGFVDTLRTNQLPEPQIVHTEL
                     SKRGGLTIVDDIMVQSATAIFAINDELAIGILRGLIEHGISIPKDISLIGYDDIDYAA
                     YVTPPLTTVAQPITDIGKTSLTLLLQRLQHLDKTIDMIELPTTLKIRATTGYHLSN"
     gene            9276..9417
                     /locus_tag="O6Y56_002187"
                     /pseudo
     CDS             9276..9417
                     /locus_tag="O6Y56_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498838.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
     gene            9506..>9884
                     /locus_tag="O6Y56_002188"
     CDS             9506..>9884
                     /locus_tag="O6Y56_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575432.1"
                     /translation="MQFKLKEEEIISFLELKYPEKEFEYGRLLVGQHKRDDLDVYYFG
                     DTFLMCTIISFKTFEIKETVELSYDAVNRIVLKDGWLFRKMRIETMQKVLKYGTSKLM
                     LTDFQKDNYNKYIQGQKQRVIFEN"
BASE COUNT         3224 a         1569 c         1851 g         3240 t
ORIGIN      
        1 attatgcact ggtgctgtta agttaggcga agtcgaaaaa gtaggaacga cactaacaaa
       61 taacattggc ttactcttcg taccagccgg tatctcagtt gttaactctt taggtgtcat
      121 tagccaagcg ccatttttaa tcattggact aataatcgtc tcaacaatac tattacttat
      181 ttgtactggc tatgtcacac aaattattat gaaagttact tcgagatcta aaggtgacaa
      241 agtcacaaaa aagatcaaaa tagaggaggc acaagctcat gattaaccac ttagcactaa
      301 acacacctta cttcggaata ctgttatccg ttataccatt tttcttagcg accatattat
      361 ttgaaaaaac aaatcgtttc ttcttattcg caccgctatt tgtcagtatg gtatttggtg
      421 tggccttcct ctatttaaca ggcattccgt ataagactta caaaataggt ggagacatta
      481 tttacttctt cttagaacca gcaacaatct gttttgcgat tccgttatat aaaaagcgtg
      541 aagtgcttgt taaacattgg catcgtatca tcggaggtat tggtatcggt acagttgtag
      601 cgttattaat tattttaact tttgcgaagt tagctcaatt tgccaatgat gttattttat
      661 caatgttacc tcaagcagca actacagcga ttgcgttacc agtatcagct ggtatcggtg
      721 gtataaaaga attaacatca ttagcagtta ttttaaatgg tgtcattatt tatgccctag
      781 gtaataaatt cttgaagctt ttccgaatta ctaaccctat tgcccgagga ttagcacttg
      841 gaacaagtgg tcacacatta ggtgtagcac cagccaaaga attaggacct gtagaagaat
      901 caatggcaag tatagcttta gtgttagttg gtgtagttgt tgtagcagtt gtgcctgtct
      961 ttgtagcaat attcttctaa aacgaaaaac ctaagcaaga taatagcaat ttgagtcatt
     1021 gttattatcg taaaaaaacg tctatattcc ggtttaaaac tgggatatag acgtttttat
     1081 gtatttatta ctttttacta ggaatataaa actgtgcatg acgataatga aatacaatgt
     1141 cagacgaatc aaagggtttg ccagtcattg tataaaaagt ctggtggtaa cgtaaacatg
     1201 gttcacctgt agacaattgt agtaatgaag cttcacttga agtgagttta tctacattaa
     1261 agaaaatatc tgaaaaacca atacgaagtt tcatgtttga ttctaaataa tcgaagatag
     1321 agcccttagc aatatcatca tttaaatatt tcacgatttc tttatgataa taagaatatt
     1381 cgatacataa aacatcatcg tccacgaatc ttaatcgctc taaatagtag acggtatcat
     1441 ctgcatttaa ttggagctca tcttgtacag atttaggtgg cgttgcaatc tccttaaaaa
     1501 caagtacctt acttgtcatt cgatgttcac ctaaactttt agaaaaacca ttagtcttaa
     1561 agacgttgat acgattggca tctgcaatat ttctcacata aataccactg ccttgtgctt
     1621 gatagatcaa accatcttgt tccaataagc ctaatgcttt aatgatagta ctcttactta
     1681 cttgataacg ttcttttaat tgcgtcacgc ttggcaattt atcaccgggt ttgaaattag
     1741 attgatgtat aaacgcatta agttgcttag caatatgttc atactttaac aatattctgt
     1801 cctcgtttca ctttgtctgt aattattata gcacaaaata ttataattgt atcggcgttt
     1861 acaaattgaa ccggtacaat tataattgga ggtaagtaaa tacattttca ttctactatc
     1921 aagttgaggg ggtaatattt atgagtaata aatataaaga ccaagcccaa gacattctta
     1981 cagctgtggg tggtgtcgaa aatattgttg atgtaacgta tgacacgaag tgcattacaa
     2041 ttcatatgca acatacaatt ccttctacag caaatgaagt gaaacaaata gttgatgtga
     2101 catctgtagc agaaaacgat gcgcagttag tcataaaatt aaacgaaaat gtcgatgaag
     2161 tgtatcagca attacagcga ttaattaaga atgctattgt tgaaaaggat gcgaatactg
     2221 acaatattaa tagccaagat acaagttata cacctcaagt aaaagtaaca acaccaattt
     2281 tagtgaaagc accaatcgct ggtcgtcgta ttttacttaa agaagtaaga gattcaattt
     2341 ttagagagaa aatggtaggt gaaggcttgg caatcaaagc tcatgaagaa tccaaagtaa
     2401 tcgcaccggt caatggttta atatctatga ttgtaccaac taagcatgca gttggtattc
     2461 aatcagaaga cggtgtggac atagtcattc atattggcgt gaatacagtt gacttggaag
     2521 gtaaaggatt caagtgcttt gtaaagcaaa atgatcgtgt tgaagcaggg caaacgttgt
     2581 tacaattcga ccagcaatat atacaacaac aaggctacaa tgctgacgtt attgtcgtta
     2641 ttagcaactc tgccgattta ggaaaagtag aactgacaat gaatgaaatc attacgactg
     2701 aagatgttat ttttaaaata tttaaaaact aggagtgtgt tgtaataatg acaaaattac
     2761 cgcaaaattt catgtggggt ggcgcacttg ccgcaaatca atttgaaggt ggatatgata
     2821 aaggtggcaa aggattaagt gtaattgatg ttatgacgag tggtgcacat ggcaaagcac
     2881 gtcagattac agaatctata gatccaaatc actattatcc aaatcatgaa ggtattgatt
     2941 tttatcatcg ttataaggaa gatattgcct tgtttaaaga aatgggattg aaatgtttac
     3001 gtacgtcgat tgcgtggaca cgtatctttc cgaatgggga tgaagatgtg ccaaatgaag
     3061 aaggactcgc cttttatgat cgtatctttg atgaattaat tgcacaaggt attgaacctg
     3121 ttgtgacgtt atcacatttt gagatgccac ttcatttagc gaaacattat ggtggattta
     3181 gaaatagaga agttgtcgat tattttgtcc attttgcgcg tgttgtattt gaaagatata
     3241 aagataaagt gacatattgg atgacgttta atgaaattaa taatcagatg gacacatcaa
     3301 atcctatctt tttatggacg aattctgggg tagcattgac agaaaatgat aatcctgaag
     3361 aagtcttgta tcaagtagca catcatgaac ttttagccag tgctttagca gttcgtcttg
     3421 gtaaagagat taatccgaag tttaagattg gaacaatgat ttcacatgta cccatttatc
     3481 catattcgtg tcatccgaaa gatatgatgg aagcacaaat tgcgaatcgt ttacgtttct
     3541 ttttcccgga tgttcaagtg agaggttatt atccaagcta tgctaaaaaa atgctggcac
     3601 gaaaaggata tgatgttgga tggcaagaag gggacgacag tattttacag cagggcacgg
     3661 ttgattatat tggctttagt tattacatgt ctacggctgt aaaacatgat gttaatacta
     3721 cagttgaaaa caacatcgtc aacggtggtt tgaatcattc tgtggagaat ccgcatatcg
     3781 caacgagtga ttggggttgg gcgattgatc cagatggctt aagatataca ttgaatgtgt
     3841 tatatgatcg ttatcagttg ccacttttta ttgtggaaaa tggttttggt gcagttgatg
     3901 aagtggtaga tggacatatt catgatgatt atcgcattga atatttaaaa gcacatatta
     3961 cagcagcgat agaagcagtt gatcaagatg gtgtagattt aatcggttat acgccatggg
     4021 gaatcattga tattgtttca tttacaactg gtgaaatgaa gaaacgctat ggtttaatat
     4081 atgttgatcg agataatgat ggtcatggca cgatggaacg cttgaaaaaa gattcgttct
     4141 attggtatca acaagtgata gcatcaaatg gagataaatt ataaaggtat attataagta
     4201 ttttagggtt agatcccgag acataaatta atgtctcagg ccctacagtg ttatattggc
     4261 gggctcccaa catagagaaa ttggaacagc aatttcaaca ggcaatgcaa gttggcgggg
     4321 ccccaacata gagaatttcg aaaagaaatt ctacaggcaa tgcaggttgg ggagagacat
     4381 aaataaattt tgcgaaaata tcatttctgt cttactccct ttatcatttt tgtcccaatc
     4441 ccgtgatgtt aaaattttaa gaaaaaataa tgccactaac tatgtatagt gttaatgttt
     4501 gagtgtttat aaaagtcttt aaccaaaatt gatgacctac taatcaacga taacgatatt
     4561 gttaagtaga tgattagtgt cacaaagaaa ttaaagtaac agtcaaacat agatacaaag
     4621 tacagttagt ggcattatat ttagtgctct tttttagcga caaaagtaat ataattcata
     4681 tctttacgca atttagtcat cgttttaaac attttgcaaa acattggtcg attttctttt
     4741 ttaaaagcat tgttgataat ctttatagtt ccaacaatac cttcgtcata aattaaacct
     4801 tttggtgtca ttaaactcat tggaccagta tgataatgca catgattaaa accagcttga
     4861 tgatataaat ctaaccagcc aagtttcgtc tgcggtgaga cattgacatt aattgctgca
     4921 gataatgatt taactacatg tgtggcatgt gattcattaa cgatgacaat atcatgtgtt
     4981 aacaagatac ccccaggctt taagactcgg tagtactcgc gtaatgcttt ttcctttatg
     5041 gcgatgggta acattgttaa cattgcttca tttaaaacga tatcgaattg attgtcatca
     5101 aagggcaatt tagcagcatt cgcttgttga acttgaatat atgattcaag gcctgctgct
     5161 gaaatatttt cctgtgcttt ttctaatgct ttcttattta tatcaacgcc ttgaatgtga
     5221 cagccgtatg tatgagctag ataaatagat gttgtgcaca tattacatgc cacttctaac
     5281 acttgtttat cttgtgaaaa tgccccttgt tgtattaacc aatctgttgc ttctttacca
     5341 ccggggcgta gacgagtttt tcctaattta gctaaaaatg tatgaccagc ttctttggac
     5401 atagcataac ctcctgttaa ttgataatta ttatcattaa tatagcatat ttatatacga
     5461 taatttggaa gttaaaaaga ttacaaaaaa ttgtcacttc atttataact aaacatgagt
     5521 catcaagcat aggtttagtg gaaaattatt tctaatagat gatgttttat aaagataaaa
     5581 aagcacagcc atgatatacg aatgttgcat gttatatgct aaaccttcat atcatagctg
     5641 tgtttggttc atttaaactt gatttacttc ttctagtaga ggaatagatg cttgcgcgcc
     5701 gtgtttttgt acagtgaggg agctcgcttt attaccaaaa tcaatagcat ctgctaagtt
     5761 atcttgcgac ttgtttaagc gactgacaaa tgcaccaata aatgtgtcgc ctgcagcggt
     5821 tgtatcaatc gcatttactt tataagcttc gatgtgttgg ctttgatttt tagtagcaaa
     5881 atatgtacct tgcttaccta acgtaatcaa aacagtctta atgcctaaag ataaaaagta
     5941 attagcattg tctttcatag attgttcatt agttacttta atcccagata acaattcggc
     6001 ttctgtttcg tttggcacaa taatatcgat tagtgacaat aattcattag gtaatgcttt
     6061 cgctggtgca ggatttaata ctgtcgtcac accatgtgcc ttggcaattt caaatgcaga
     6121 tataatagcc gggatgggta cttctaattg tgcaacgaca aagtctgcat tgattataga
     6181 gtcttttgcg ttaataacat cttcaggtgt catcgtcata ttcgcaccac cataaacata
     6241 gatggtgttt tgtccttctg cattcacagt gataaaggct tggcccgttt ttgcttcagt
     6301 tgttttgata atatatgatg tatcaatatg agccgcttta aaatcttcta agatgaaatc
     6361 agcaacgcca tcagtgccaa ttttagtaat aaatgttgtg tctgcttgca tgcgtgcagt
     6421 ggcaatagcc tggttggcac ctttacctcc gccgaatgct ttttgtgctt cttcaacatg
     6481 taatgtttcg cctggttgtg catatctttc aactgttaaa aattgatcga cattcgttga
     6541 acctaaaata acaactttgt tggtcatgtg tatgctcctt tcaagttata atttttaaaa
     6601 agtaacattc gattctaatg caatattaga gtaaggcgtt gtttcaccag tacgaatatt
     6661 acctttattt aatgggtgag ctaagttact tttcatttct tcgtgaggaa tgaaaatgat
     6721 ttcgatttcc gatgaaatca attgtttaat ttgttgcaat tgtgtagggt tatgttcttt
     6781 tatttcttct gctaagtata ttttttggat ttccatttct tctaacactg tagctaagac
     6841 atcaataaag cgtggtaagt ttttagtgac agctaggtcg atacggcgat gatcatttgg
     6901 aattggcatg ccagcgtcat taattgttaa taggtcaaaa tgaccaattg tcgcgattgc
     6961 ttttgaaata tgttcattta aaacagctga ttttttcatg acatctacac tccttatttt
     7021 ataaatactg taacagaagc ggctactaaa atgagtacta agccgataat tgtaataatc
     7081 atttcttttg acgttttatg ttgttttaag aaataaatac cagttaatgt agcaagcaca
     7141 acggatgttt gagaaagaat aaatccagtt gctaaaccat tcatattagg ttgtgctgaa
     7201 ataagatatg ttaaggcacc aaatgcaaag aagaaacctg aaataatttg taaccacgta
     7261 attttattac gaaatgggtt ctctgctttc atattcataa agccataaat gactgcaaca
     7321 attaccatac ccattgcttg aggtaaaaag gcagttaggc catcaataga agttgcttgt
     7381 ggtgcggctg aatataacca gtatccaaat tcaccaatta acagaagaat cactgcacga
     7441 cgtaaatttt tggcgttact tgcttctttg cgttcactcc aaactgtcat acgcgcacca
     7501 attaaaataa cgactaaagc tgtaaagcca atgattttat gaccaatgcc cggccaattt
     7561 cctaatgcaa agacacccca taaagatgcg cctaataatt ggaatgctgt tgtgacaggc
     7621 atggcacgag atgaaccgac taattcgaac gctttaaatg taatgatttg tccgaatccc
     7681 catcccgcac ctgataataa ggcgaatagt aaatttgttc cagtagggaa gccacttgat
     7741 gtgactacgg ctaatataat agcgaagatt aacgtaccta cagtagcacc gataatttga
     7801 tgtacaggtt taccaccaaa ctttgaagcg actgttggga agaatcccca gccaattaag
     7861 gggcctaacc cgataagtaa tgcaacaatg ctcatgttat acacctcacg atttgttttt
     7921 agtaaaacgt tttaccagtg ccatcgtacc atttttattt gtaaaatgca tgcgttttca
     7981 taaaaactga aaacgtttaa atcatattta aaaattcata cattattatt ttaatttctt
     8041 agtgaaataa ttatgattaa aaaccctcag cattaaagca acgctaaggg cataacaatg
     8101 atgagtatat ttcggaagat acgtagttag tttgaaagat gatagccagt tgttgcacga
     8161 atttttaaag tcgttggtaa ttcaatcata tcaatggttt tatctaagtg ctgtaatcgt
     8221 tgaagtaata aggttaaaga tgttttgcca atatcagtta taggttgtgc cacagtagtc
     8281 aaaggtggcg tgacatacgc ggcataatca atatcgtcat aacctattaa tgagatatct
     8341 ttcgggatac tgatgccatg ttcaattagt cctcgtaaaa tgccaatagc gagttcatcg
     8401 ttaatagcga agattgcagt ggcagattga accatgatgt catcaacaat ggttagccca
     8461 ccgcgcttag ataattcagt atggacgatt tgtggttcgg gcaattgatt cgtgcgcaaa
     8521 gtatcaacaa atccagcgac acgagtcgac atattcgcca tcatgtcata tggtgcaaca
     8581 atcatcatat tgttgtgacc gagttctatt aaatgttgtg ctgcaagttg tccgccttga
     8641 tattcatttg tccgaacaaa atctgtataa ccttgatggt cattttgatc cagtacgaca
     8701 taaggtacat gatgtttctt tagataatta tttaggacgt ccggggatga aatgtattgt
     8761 gcgataatta atccgtcaat acctcgctca attaaatgtt taatattgtc atacaaatca
     8821 gttgctgtag atgttaaaaa acataaatca acatcagatg gtttatggtc atgaatactt
     8881 tgcatcagtg ctgagaaaaa cggatttgtt aagctaggca aaatgacgcc aatagtttga
     8941 attttactgc cgcgcaattg ttttgcatgt ttgttagggg catagcctaa acgttctgaa
     9001 acagcatgta cgttttttat cgttgttgcg gaaaaacgac tatcattatg atttaaaata
     9061 tgtgacaccg tagtaactga tacaccagct tctctagcaa catctttaat tgacactttt
     9121 ttcatattat attccttctc tttattgtgt aattaatcat acagttatat acccgattat
     9181 tatattcatc atatcatgat aagcatttga tgacatatga agaggtgcat gacttttatt
     9241 gtctacaaac agacgcctat agtatgcgat taaggttgag gcgagagaat atattattaa
     9301 ggttaaataa cttttaatga ttatgataac aagaatttta aaatgtttat tgtgatgaaa
     9361 aatacaaaag tcattatttt aaagaataaa atatttgttt ttgaaaaaaa gtattaaaaa
     9421 cataacaaaa tgatgtatat tgaactatgt gattgaaaaa atttttaatt aaggcttgtt
     9481 aaaacttaag agaggatgtt tttaaatgca attcaaatta aaagaagaag agattattag
     9541 ttttttagaa ttgaaatatc cagaaaaaga gttcgaatat ggtcgtttgt tagttggaca
     9601 acataaacgt gatgatttag atgtttatta ctttggtgat acgtttttaa tgtgcacgat
     9661 tatttcattc aagacatttg aaattaaaga aacagtagaa ttatcatatg atgctgttaa
     9721 tcgtattgtg ttaaaagatg gatggttatt tagaaaaatg agaatagaaa caatgcaaaa
     9781 agtgttaaaa tacggtacat ctaaattaat gttaactgat tttcaaaagg acaattataa
     9841 taaatatatt caaggtcaga aacaacgcgt gatatttgaa aatg
//
LOCUS       DALMNS010000101         9864 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.101, whole genome shotgun sequence.
ACCESSION   DALMNS010000101 DALMNS010000000
VERSION     DALMNS010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9864
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.101"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(472..1026)
                     /locus_tag="O6Y56_002189"
     CDS             complement(472..1026)
                     /locus_tag="O6Y56_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase family protein"
                     /protein_id="HDB5575433.1"
                     /translation="MTDVIIVHSMHGNSRNHWYQWLEHNLTLEGYDVTLFNFESPEAK
                     TVDQWIEAMTKQINVRKKDTYFVTHGLGSITALKYIEMIDQPIEGFFSIAGFKEDAEN
                     IDLDIDLSNVTIDYDNIKKKVDNFYGLSSKNDKYVSYKETQRLMNALEGNLRIVEDGG
                     HFLEEDGFETFTALQDRMQDYMTR"
     gene            complement(1341..2741)
                     /locus_tag="O6Y56_002190"
     CDS             complement(1341..2741)
                     /locus_tag="O6Y56_002190"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HDB5575434.1"
                     /translation="MTKSVAIIGAGITGLSSAYFLKQQDPNIDVTIFEASNRPGGKIQ
                     SYRKDGYMIELGPESYLGRKKIMTELAKDIGLEQDIVTNTTGQSYIFAKNKLYPIPGG
                     SIMGIPTDIKPFVTTKLISPLGKLRAGLDLLKKPTQMQDGDISVGAFFRARLGNEVLE
                     NLIEPLMGGIYGTDIDKLSLMSTFPNFKEKEEAFGSLIKGMKDEKNKRLKQRQLYPGA
                     PKGQFKQFKHGLSSFIEALEQDVKNKGVTIRYNTSVDDIITSQKQYKIVYSNQQEDVF
                     DGILVTTPHQVFLNWFGQDPAFDYFKTMDSTTVATVVLAFDEKDIENTYDGTGFVIAR
                     TSDTDITACTWTSKKWPFTTPEGKVLIRAYVGKPGDTVVDDHTDNELVSIVRRDLSQM
                     MTFKGNPEFTIVNRLPKSMPQYHVGHIQQIRQIQAHIKQTYPRLRVTGASFEAVGLPD
                     CITQGKVAAEEVIAEL"
     gene            complement(2765..3688)
                     /gene="hemH"
                     /locus_tag="O6Y56_002191"
     CDS             complement(2765..3688)
                     /gene="hemH"
                     /locus_tag="O6Y56_002191"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDB5575435.1"
                     /translation="MTKKMGLLVMAYGTPYKESDIEPYYTDIRHGKRPSEEELQDLKD
                     RYEFIGGLSPLAGTTDNQADALVSALNKAYADVEFKLYLGLKHISPFIEDAVEQMHND
                     GITEAITVVLAPHYSSFSVGSYDKRADEEAAKYGIQLTHVKHYYEQPKFIEYWTNKVN
                     ETLAQIPVEEHKDTVLVVSAHSLPKGLIEKNNDPYPQELEHTALLIKEQSNIEHIAIG
                     WQSEGNTGTPWLGPDVQDLTRDLYEKHQYKNFIYTPVGFVCEHLEVLYDNDYECKVVC
                     DDIGANYYRPKMPNTHPLFIGAIVDEIKSIF"
     gene            complement(3746..4783)
                     /gene="hemE"
                     /locus_tag="O6Y56_002192"
     CDS             complement(3746..4783)
                     /gene="hemE"
                     /locus_tag="O6Y56_002192"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDB5575436.1"
                     /translation="MVHNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKYS
                     LFDITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPI
                     KTIQDVEKLSQIDPERDVPYVLDTIKLLTEEKLNVPLIGFTGAPFTLASYMIEGGPSK
                     NYNFTKAMMYRDEATWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYR
                     RYIKPHMIRLISEVKEKHDVPVILFGVGASHLINEWNDLPIDVLGLDWRTSINQAQQL
                     GVTKTLQGNLDPSILLAPWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRK
                     VSEFVHTYTQR"
     gene            complement(4773..4880)
                     /locus_tag="O6Y56_002193"
                     /pseudo
     CDS             complement(4773..4880)
                     /locus_tag="O6Y56_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500462.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5045..5548
                     /gene="traP"
                     /locus_tag="O6Y56_002194"
     CDS             5045..5548
                     /gene="traP"
                     /locus_tag="O6Y56_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction protein TRAP"
                     /protein_id="HDB5575437.1"
                     /translation="MKKLYTSYGTYGFLNQIKINNPSHHLFQFSTADSSVIFEETEEN
                     TVLKSPSIYEVIKEIGAFNEDHFYCAIFIPSTEDHVYQLEKKLISVDDNFKNFGGFKS
                     YRLLRPVKGTTYKIYFGFADRQTYEDFKNSDAFKDHFSKEALSHYFGSSGQHSSYFER
                     YLYPIKE"
     gene            complement(5672..6895)
                     /locus_tag="O6Y56_002195"
     CDS             complement(5672..6895)
                     /locus_tag="O6Y56_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5575438.1"
                     /translation="MRNQATTLFNKRLHALRKEKNYYNKFIFNGHFMVFLLILLGAFI
                     FGYGEWLKHIPTNINFSLIAAVIVALTSIFPMRPLLKEADKIFLLPFEKHMSQFMRHA
                     ILYSYFARILIQLIIVIVMFPLFYNINQHNVAFYICFGVSALIFPYVGLRLRWQWYQS
                     GLKTWQVNLISFIIFALTYYLLLAPKWYIVFVMVALPVLIEFLVKKYKPGFLYPWEKM
                     IAIEHRHHMNYYKFVNMFTDVKHLKESAVRRSYLDILLPVPKGSKFNSNAMYLFLFIR
                     SFIRGRDAFNIIFRLVIIAVLLMVWLSYPLVTAIIGCLFVYIILLQMAQFYSQQAYGL
                     WPQVWPVPEDKVIKGYEQFLYRLMFVICTVFAVTFIIKHMTLFYVVLIFYIVGLLTIR
                     SIIKKLKYQETLLRD"
     gene            complement(6888..7628)
                     /locus_tag="O6Y56_002196"
     CDS             complement(6888..7628)
                     /locus_tag="O6Y56_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5575439.1"
                     /translation="MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTT
                     IKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYIPESPVIYEELTLEEHIEMTAMA
                     YDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
                     FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLE
                     ALRQQTGLHNQTLDDIYIHVTQGGDVHA"
     gene            7762..8184
                     /locus_tag="O6Y56_002197"
     CDS             7762..8184
                     /locus_tag="O6Y56_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HDB5575440.1"
                     /translation="MSETIFGKILTGEIPSFKVYEDDYVYAFLDISQVTKGHTLLIPK
                     KASANIFETDEETMKHIGAALPKVANAIKRAFNPDGLNIIQNNGEFADQSVFHIHFHL
                     IPRYENDIDGFGYKWETHEDILDNDAKQQIAEQIQAQF"
     gene            8326..8691
                     /locus_tag="O6Y56_002198"
     CDS             8326..8691
                     /locus_tag="O6Y56_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HDB5575441.1"
                     /translation="MKASRILFGIGVGVAAGFVVALQGRDDKSVKNNTIDRTAPTGSK
                     SELQREFETIKQSFNDILNYGVQIKNESAEFGSSIGGEIKSLLGNFKSDINPNIERLQ
                     SHIENLQNRGEDIGNEISK"
     gene            9424..>9864
                     /locus_tag="O6Y56_002199"
     CDS             9424..>9864
                     /locus_tag="O6Y56_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HDB5575442.1"
                     /translation="MFLCKRQIDINARFGLPRIAFMSAVATIIMFLVSYEVMYFLSNT
                     PLSDRHFLIFLLLVFMTYPLHKSIHLLFFLPYRKSFKVHKLTKRKWLIFYNTYVNQPV
                     HKFYFCINLILPLIILSAMFVYLTISFPQYGHYFMFLLALNFGIS"
BASE COUNT         3236 a         1785 c         1366 g         3477 t
ORIGIN      
        1 taatattatt ttgaattacc taattaatat accataatca aaaacctaaa gtcaagaact
       61 ttttgaattt aatttaaatg ttatctctta aataattact taaatatcgt agcaacatgt
      121 tctctgttga acacaaatat tagtatattc atttttgtag tgtacgtcaa cgacattttc
      181 aaagtttttt gtgtaaaaaa acgcttctta ttccctttta tcatataagt gtctaatagt
      241 tgtcataaat agtgttaaag catttaaaaa ggtataggaa ttataaagtt tataacgcct
      301 ataccttctg aaaagaaatt ataaaagctt gttacaaccg catattcatt cagtcagcga
      361 ctaccaatat aacgttgcag cccctaagac attgcttggc gccttaatta ccacaatttt
      421 ttcaaaatca gcagctacct actgacacaa cataacacaa caatacacta actatcgtgt
      481 catgtaatct tgcatccgat cttgcaacgc tgtaaatgtt tcgaagccat cctcttctaa
      541 gaagtgccct ccatcttcca cgattcgcaa gttcccctct aatgcattca ttaaacgctg
      601 ggtttcttta tatgaaacgt atttgtcatt tttagaactc aatccgtaaa aattgtcaac
      661 tttcttttta atattatcgt aatcaatggt tacattactt aaatcaatat ctaaatctat
      721 attttctgca tcttctttaa agcccgctat actgaaaaag ccttcaatcg gctgatcaat
      781 catttcaata tattttaaag ctgttattga acctaaacca tgtgttacaa aatatgtatc
      841 ctttttgcgt acattaattt gtttcgtcat agcttcaatc cactgatcga ctgtcttcgc
      901 ttcaggggat tcaaaattaa ataatgttac gtcatatcct tctaaagtta agttatgctc
      961 taaccactga taccaatgat ttctactatt accatgcata gaatgtacaa tgattacatc
     1021 tgtcatcaca ttctctcctt tcaacttact acttctattc tattttaaaa aaatgaatac
     1081 ttacctataa ttgtaaaata aaaacacctt aattagaaat cttttatcgc aaagtgacat
     1141 ttctaattaa agtgtattgt catcatttca atattattca aaaacagcta accctttgtc
     1201 tctgcttcaa tttcatgaaa taattcccgc tgaaagtatc atgatttaca cattacttcc
     1261 accattatat aacttaaaaa tgactatatt tcatcaaaca ttatctaaag gcatcacacc
     1321 aacaccatcc aacaattaac ttacaactct gcgattactt cttcagcagc aactttacct
     1381 tgtgtaatac aatcaggtag tccaaccgct tcaaaagatg caccagttac tctaagtcgt
     1441 ggatatgttt gtttaatatg tgcttgaatc tgtctaattt gttgaatgtg accaacatgg
     1501 tactgtggca tacttttcgg caaacgattg acaattgtaa attcaggatt acctttaaat
     1561 gtcatcattt gacttaaatc tctacgtaca atcgatacta attcattatc tgtatgatca
     1621 tcaaccacag tatcacctgg tttacctaca tacgcacgaa tcaaaacctt accttctggt
     1681 gtagtaaatg gccatttttt cgatgtccaa gtacatgcgg taatgtcagt atcactcgtt
     1741 ctcgcaatca cgaagccagt accatcataa gtattttcaa tgtctttttc atcaaatgcc
     1801 aatacaacag ttgcaacagt cgtactatcc atcgttttaa agtaatcaaa tgctggatct
     1861 tgcccgaacc aattcaaaaa aacttgatgt ggtgttgtca ctaatattcc atcgaataca
     1921 tcttcttgtt gattactgta aacaatttta tattgctttt gagatgtaat aatatcatcc
     1981 actgacgtat tgtaacgtat tgtcacacct ttatttttca catcttgttc taatgcttca
     2041 ataaatgaac ttaaaccatg tttaaattgt ttgaattgtc cttttggtgc gccaggatat
     2101 aattgtcttt gtttcagacg cttatttttc tcatccttca taccttttat cagacttccg
     2161 aatgcctctt ctttttcttt aaaattagga aacgtactca tcaaacttaa tttatcaata
     2221 tcggtaccat aaataccacc cattaaaggc tctattaaat tctcaagtac ctcattacct
     2281 aatcttgctc tgaaaaatgc accaacagaa atgtcaccat cctgcatttg agtaggtttt
     2341 ttaagtaaat ctaaccctgc tcttaacttt ccaagtggtg aaattaattt agttgtcaca
     2401 aacggtttga tatctgtcgg aattcccata attgatccac ctggaatagg atacaatttg
     2461 tttttcgcaa aaatataaga ttgtccagtc gtatttgtaa caatatcttg ttctaatcca
     2521 atatctttcg ctaattctgt catgatcttt tttctaccta aataagattc aggccctagt
     2581 tcaatcatat aaccatcttt acgatacgat tgaatctttc cccccggacg attcgatgct
     2641 tcaaagatgg ttacatcaat attaggatct tgctgtttta aaaaatatgc acttgataaa
     2701 cctgttatcc ccgctcctat aatagccact gatttagtca caacgtttca cgcttctttc
     2761 gtcattaaaa tatagacttg atttcatcaa caattgcacc gataaataat ggatgtgtat
     2821 tcggcatttt tggacgataa taattcgcac caatatcatc gcaaacaact ttacattcat
     2881 aatcattgtc ataaagcacc tctaaatgct cacatacaaa acctactggc gtatatataa
     2941 agtttttata ctgatgtttt tcatataaat cacgtgttaa atcttgtaca tctggcccta
     3001 accaaggtgt accagtatta ccttcagatt gccaaccaat cgcgatatgt tcaatattag
     3061 attgttcttt aattaaaagc gcagtatgtt ctagttcttg tggatatgga tcattattct
     3121 tttcgattaa accttttggc aaactatgtg ccgaaacaac taataccgtg tctttatgtt
     3181 cctctaccgg tatttgagct aatgtttcgt tgactttatt cgtccaatat tcaataaatt
     3241 taggttgttc ataataatgt ttcacatgtg taagttgaat accatatttt gcagcttctt
     3301 catcagcacg tttgtcatat gatcctactg aaaatgaaga ataatgtggt gctagtacta
     3361 cagtgattgc ttcagtaata ccatcattgt gcatttgttc aaccgcatct tcgataaatg
     3421 gtgaaatgtg ttttaatcct aagtatagtt taaattcaac atctgcatat gctttattta
     3481 atgctgaaac tagcgcatca gcctggttat ctgttgtacc tgctaatggt gataaaccac
     3541 ctataaattc atatctatct ttcaaatctt gaagttcttc ttcagatgga cgtttaccat
     3601 gtctaatatc tgtataatat ggctctatgt cactttcttt ataaggtgtg ccataagcca
     3661 taactaataa tcccattttt ttagtcattg ataatacctt cctttaaatg aattatcttt
     3721 catgtgcttc aatgtaatac tatgattatc tttgtgtata tgtgtgtaca aattcgctta
     3781 ctttacgtaa cgtctctggt tgcacttctg ggaaaacacc gtgtcctaaa ttaaagatgt
     3841 gtttaccgtt ctccatacct tgatctaata ttggtttcaa tctctcttca atgacattcc
     3901 atggtgctaa taaaattgat ggatctaaat tcccttgtaa tgttttagta acgcctaatt
     3961 gttgagcctg attaatagac gttctccaat ctaggcctaa tacatcaatc ggtaaatcat
     4021 tccattcatt gattaaatga ctggcaccta caccgaataa aattaccggc acatcatgtt
     4081 tttctttaac ctcactgatt aatcgaatca tatgtggttt aatgtaacgt ctgtaatcct
     4141 cgacatttaa tgcacctacc catgaatcga aaatttgaat caattcggca cctgcttcga
     4201 cttgagctgt tacatattta acagatacat caactaaatg attcattaaa gcaaaccatg
     4261 ttgcttcatc tctatacatc atcgcttttg taaaattgta atttttcgat ggtccgcctt
     4321 caatcatata tgacgctaat gtaaatggtg ccccagtaaa tcctattagc ggtacattta
     4381 acttttcttc tgttaaaagt ttaattgtat ctaatacata tggtacatct cgttcggggt
     4441 ctatttgaga aagtttctca acatcttgaa ttgttttgat aggattatga atcactggac
     4501 caatacccga tttaatttct acatcgacac caattggctt taatggtgtc ataatatctt
     4561 tgtataaaat tgctgcatct gtatgataat tatcaactgg taaatgtgta acataagcgc
     4621 acaactccgg ctgatgggta atatcgaata gtgaatattt ttctttcaat tttcgatatt
     4681 ctggttgcga acggccagct tgtcgcataa accaaacagg tgtatgtgtc gtttcttcac
     4741 ctttaatcat tttcaaaatt gtattgtttt tattatgcac cataaaggcc tcctaaatta
     4801 aaatcattct tatctatatt atcatatcgc tcattcgttc gtattttcaa taaataaatg
     4861 tcataaaact gacattaaat tacacatcat ttgtttgtgt atttaaattt taaaatcttg
     4921 atggattatc tccacacctt tttgtcttgc atgatttatt atagtaactt taaccgtata
     4981 ttaatagtgg taatgactag tttatcgtcg tataataaat aaaaacataa gggggacctt
     5041 tcatatgaag aaattatata catcttatgg cacatatgga tttttaaatc agataaaaat
     5101 caataatcca tctcatcatt tattccaatt ttcaactgct gattcatcgg tgatttttga
     5161 agagactgaa gaaaatactg tactgaaatc accttcaata tatgaagtta ttaaagaaat
     5221 aggcgcattc aatgaagatc atttttattg cgcaattttt attccgtcaa ctgaagacca
     5281 tgtttatcaa cttgaaaaga aattaatcag tgttgatgac aatttcaaaa actttggtgg
     5341 ctttaaaagt tatcgattgc tgagacctgt taaaggtaca acttacaaaa tttactttgg
     5401 ctttgctgat cgacaaactt atgaagactt taaaaattct gatgctttta aagatcattt
     5461 ttcaaaagaa gcattaagtc attactttgg ttcaagcgga caacattcaa gttattttga
     5521 aagatattta tacccaataa aagaatagat tcgaagaaaa cttccattgg ttatgctgtt
     5581 aacgtataga tgctaatgta atctgaacgc cgtatcattt ggcgttcaac attacatgca
     5641 cctttacaac atacatgcca atggaagttt tttagtctcg taataatgtt tcctgatatt
     5701 ttaacttttt aataatactt ctaatcgtta ataaacctac aatatagaaa atgagtacaa
     5761 catagaataa cgtcatatgt tttataataa atgtcactgc aaacacagta caaataacaa
     5821 acatcaatct atataaaaac tgttcatacc ctttgattac tttatcttca ggtacaggcc
     5881 acacttgagg ccataagcca tatgcttgtt gagaataaaa ttgtgccatt tgtaacaata
     5941 taatatatac aaataaacac ccaataattg ctgtcactaa tggatatgat aaccaaacca
     6001 taagtaaaac tgcaataatt actaacctaa agataatatt aaacgcgtct ctccctctta
     6061 taaagcttct aataaataag aataaataca tcgcattaga gttaaattta ctacccttcg
     6121 gaactggtaa aagtatatct aaataacttc ttctgactgc agattctttc aaatgtttca
     6181 catcggtaaa catattaaca aatttataat aattcatatg atgtcgatgt tcgatagcaa
     6241 tcattttctc ccaaggatac aaaaagcctg gtttatattt tttaactaaa aattctatta
     6301 acacaggcaa agcaaccatc acaaatacga tgtaccattt tggagctaat agtaagtaat
     6361 atgttagagc aaagatgatg aatgatatta aattaacttg ccatgtttta agtcccgatt
     6421 gataccattg ccatcttaag cgtaaaccaa catatggaaa aattaacgca cttactccaa
     6481 aacaaatata aaatgccaca ttatgttgat taatattgta aaacaacggg aacattacaa
     6541 taacaataat gagttggatt aatatgcgcg caaagtaact atataaaatc gcatggcgca
     6601 taaattgaga catgtgtttt tcaaatggta ataaaaagat tttatccgct tcttttaaca
     6661 gtggtcgcat tggaaaaatg gatgtcaacg caacaatcac tgctgctatt aatgaaaaat
     6721 tgatattcgt tggaatatgt tttaaccatt caccatatcc aaaaataaat gcacctagca
     6781 aaataagtaa aaagaccatg aaatgaccat taaatataaa cttattataa taatttttct
     6841 ctttacgaag ggcatgtaat cttttattaa ataatgtggt cgcttggtta cgcatgtaca
     6901 tctccacctt gcgtcacatg aatatatata tcgtctaatg tttgattatg taagccggtt
     6961 tgttgtctca atgcttctaa atctccaaat gcaacgactt caccttcgtc tagtatgata
     7021 aaacgatcac aataacgttc agctgttgct aaaatatgtg tactcattag aacggttcta
     7081 ccttcgtttt tcttttcaac cattaaatct aacatggatt gaattcctaa tggatctagg
     7141 ccaaggaatg gttcgtctat aatatacaat tcgggattaa cgataaacgc acaaataatc
     7201 atgacttttt gtttcatccc cttagaaaaa tgactcggaa aaactttcaa ttcattttct
     7261 aaacggaatg tctttaataa tggcattgct cgattcatcg cttcatcacg atcaatatca
     7321 tatgccattg ctgtcatctc aatgtgttcc tctaatgtga gttcttcata aataaccggt
     7381 gattccggaa tataagataa ctttcttcta taagcctcta tgtcatcatt aatgttgata
     7441 tctgaaattg atagagatcc ttccataggt gtaagcaatc ctagcatatg tttaatcgtt
     7501 gtactcttac cagcgccatt aaggccaata agtccaacga tttcgccttt gtttaattca
     7561 aaatttatat ctttaattac agggcgtttt ccatatccac ctgtaagctg ttctacttta
     7621 actgtcataa ggcacctcca tgacttatat tgtaccaaaa attataaaat gctcatatta
     7681 aatacacatg tcctaatatc gaatttttaa cgacaatgtt ataatgaatg gtaatacaag
     7741 ttgaaaagga gtgtagtcat catgtcagaa acaattttcg gcaaaatttt aactggagaa
     7801 attcctagct ttaaagtata tgaagacgat tatgtctatg cctttttaga tatatcacaa
     7861 gttactaaag gacatacgtt attaattcct aaaaaagctt ctgctaatat ctttgaaact
     7921 gatgaagaaa caatgaaaca tatcggtgca gcattaccta aagtagcaaa tgctattaag
     7981 cgtgcattta atcctgatgg tttaaacatt attcaaaata atggtgagtt tgcagatcaa
     8041 tctgtatttc atattcattt ccacttaatt cctcgatatg aaaatgatat tgatggattt
     8101 ggttataagt gggaaacaca tgaagatatt ttagataacg atgcaaaaca acaaattgct
     8161 gaacaaattc aagcacaatt ttaaatgtat gcttaatcta agctcgaacg ggtataatat
     8221 gattaatatt ataacaattg cgtttgaagt gataacatca aggttagcaa ttttaaacaa
     8281 aatgagttat caagataaca gatgttaaaa gtgaggagaa tataaatgaa agcatcacgc
     8341 attctattcg gtatcggtgt tggcgtagca gctggttttg tagttgcact tcaaggacga
     8401 gacgacaaaa gtgtcaagaa caacacgatc gatcgtactg cccctactgg ttcaaaatca
     8461 gaactacaac gtgaatttga aacgattaaa caaagtttta atgacatttt aaactatggt
     8521 gttcaaatta aaaacgaaag tgcggaattt ggtagttcaa ttggtggtga aattaagtca
     8581 ttacttggaa acttcaaatc tgacatcaat cctaatattg aacgtttaca gtcacacatc
     8641 gaaaatttac aaaatcgtgg cgaggatatt ggaaacgaaa tttctaaata gcacgttacg
     8701 ttctcgatca caactatttt tattagtaac agcatattta ttttttaaaa ttaaatgcca
     8761 aataaacgag atgacattag aaattagata tttcttgtca tctctttttt ataactcgaa
     8821 tgaacttatg tttacaaatt acaggaagac gttgtttgta gtgatttcca cttaaatcat
     8881 atttatgaat tgattgaaaa cattgcttag gattcattgt gttatccttg cactttgatt
     8941 acgctttact taaatcatta tcgacaaata acattcttat attttcattg agccgaacct
     9001 tatatgcaca ttacatatac cttacttgca caaataatta atctggtgtt tattatcatt
     9061 acatatcact atatttttag catttgtatg acttagttgg tcaaaagatg cttttgcata
     9121 tgccctgcca tatccatttt ttatattatc caagttttca aatactcatg tcatacgcgc
     9181 ctttttaata agtgatgctc tattagcaag aatatgtgtt cgcagaaatt tgttctgcat
     9241 tctacttcta cgctagtcaa tcagccaatt ttaccaatcc ccactttcgc gtttcaaatc
     9301 aaacaatacg tcgccccttt cttcttatat aacaattctt ctaacatgat atgttactat
     9361 tgaattactg aacctgagtt agttataatc taacttatat tgaaaagaga tgaggcgtaa
     9421 gatatgtttt tatgtaaaag acaaattgat atcaatgcac gatttggttt gcctagaatt
     9481 gcttttatga gtgcagttgc aaccatcatt atgtttttag tcagttatga agtaatgtat
     9541 tttttatcta atacgccatt atcagataga cattttctca tctttttatt acttgtattt
     9601 atgacgtatc cattacataa aagtatacat ttattatttt tcttaccata tagaaaatcg
     9661 tttaaagttc ataagttgac taaaagaaaa tggcttatat tctataatac ctacgtcaat
     9721 caacctgtac acaaatttta tttttgcatt aacttaatat tgccgttaat tatcttatct
     9781 gcaatgttcg tttatctaac aatttcattc ccgcaatatg gacattattt tatgttctta
     9841 ttggcattga atttcggtat ttcc
//
LOCUS       DALMNS010000102         9712 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.102, whole genome shotgun sequence.
ACCESSION   DALMNS010000102 DALMNS010000000
VERSION     DALMNS010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9712
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.102"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(82..297)
                     /locus_tag="O6Y56_002200"
     CDS             complement(82..297)
                     /locus_tag="O6Y56_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000867358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HDB5575443.1"
                     /translation="MKVNKAIYVIVALFLGGLGIHKFYADKFGQGLFHLLFFWTGIPT
                     IISIIHAIFVIFTKKADKDGYIIFPKN"
     gene            462..1013
                     /locus_tag="O6Y56_002201"
     CDS             462..1013
                     /locus_tag="O6Y56_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5575444.1"
                     /translation="MIRQARPEDRFDIAKLVYMVWDDMELELVKHLPKDIVLDAIEKS
                     CVDATYRTFYQHILVYEVENKVAGCIISYSGENELKYEKAWELLDLPEEIKQYGTPLP
                     VKEAKDDEYYIETIATFEAYRGRGIATKLLTSLLESNTHVKWSLNCDINNEAALKLYK
                     KVGFISDGQIELYKHMYHHLIVK"
     gene            complement(1064..2002)
                     /locus_tag="O6Y56_002202"
     CDS             complement(1064..2002)
                     /locus_tag="O6Y56_002202"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HDB5575445.1"
                     /translation="MSNQYQQYSTVKKYWHLMRPHTLTASVVPVLVGTAASKIYFLGS
                     EDHIKISLFIAMLLACLLIQAATNMFNEYYDYKKGLDDHESVGIGGAIVRNGMSPELV
                     LRLAIAFYILAAILGLFLAANSSFWLLPVGLVCMAVGYLYTGGPFPISWTPFGELFSG
                     VFMGMFIIVIAFFIQTGNIQSYVIWLSVPIVITIGLINMANNIRDRVKDKASGRKTLP
                     ILLGKNASLTFMAIMYFIAYAFIVLTIIIKPGGSLFYLLALLSFPMPVKVIRRFKKND
                     TPPTMMPAMVAAGKTNTFFGLLYALGIYISALFAGI"
     gene            2184..3545
                     /locus_tag="O6Y56_002203"
     CDS             2184..3545
                     /locus_tag="O6Y56_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000190617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase MenF"
                     /protein_id="HDB5575446.1"
                     /translation="MATGVLEDDIVKEIYDSSKEWVSVEVKLSQSLDPSTLFHLTDNE
                     AGDRFYMRLNDNRTSYFGYKAIQLFKNNSKNKQSIFKDWEKLKHNITFIHPQSEKHHL
                     RVVGGFQFSSHKSDDEWREFGLNHFVLPEVLISTDNNGTFLTYTVKRESFTVEALNDL
                     MDLFNNISDIDVDEQIGEITRNEDIYKDDWRQLVVEAIESINNEEKIVLARRRLIKFD
                     KDISIPYILKQAYSKEKNSYIFLLESQDSIFFSQTPEQLIKVNNKILSTKAVAGTIKR
                     SQDEDEDTKNVEAFLKDNKNLIEHRFVVDSILHDIKPYITELHYDKTPKILKNDHLYH
                     LYTEIKAPLKDDSYISLIDNLHPTPALGGYPKEFAMDFIEQKEFGTRGLYGAPVGYID
                     IYDDCEFIVAIRSMLIKKAQATLFAGCGIVKDSDPDSELAETNLKFTPMMNALGVDMN
                     GKS"
     gene            3532..5205
                     /gene="menD"
                     /locus_tag="O6Y56_002204"
     CDS             3532..5205
                     /gene="menD"
                     /locus_tag="O6Y56_002204"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HDB5575447.1"
                     /translation="MGNHKAALTKQVFTFASELYAYGVREVVISPGSRSTPLALAFEA
                     HPNIKTWIHPDERSAAFFAVGLIKGSERPVAILCTSGTAAANYTPAIAESQISRIPLI
                     VLTSDRPHELRSVGAPQAINQVNMFNNYVSYEFDMPIADDSKETIDAIYYQMQIASQY
                     LYGPHKGPIHFNLPFRDPLTPDLNATELLTSEMKILPHYQKSIDASALRHILNKKKGL
                     IIVGDMQHQEVDQILTYSTIYDLPILADPLSHLRKFDHPNVICTYDLLFRSGLDLNVD
                     FVIRVGKPVISKKLNQWLKKTDAFQILVQNNDKIDVFPIAPDISYEISANDFFRSLME
                     DTTVNRVSWLEKWQCLEKKGRKEIKCYLEQATDESAFVGELIKKTSEKDALFISNSMP
                     IRDVDNLLLNKNIDVYANRGANGIDGIVSTALGMAVHKRITLLIGDLSFYHDMNGLLM
                     SKLNNIQMNIVLLNNDGGGIFSYLPQKESATDYFERLFGTPTGLDFEYTAKLYQFDFK
                     RFNSVSEFKNATLLSETSTIYELITNREDNFKQHQILYQKLSEMIHDTL"
     gene            5192..5995
                     /gene="menH"
                     /locus_tag="O6Y56_002205"
     CDS             5192..5995
                     /gene="menH"
                     /locus_tag="O6Y56_002205"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HDB5575448.1"
                     /translation="MTHYNYYEANVETNQVLVLLHGFLSDSRTYHNHIDKYTNICHVI
                     TIDLPGHGEDQSSMDETWNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAING
                     HIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQL
                     ELPVEIQHQIRQQRLSQSPQKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEK
                     FVQIAKKMANLIPNSKCKLISATGHTIHVEDSDEFDTMILGYLKEEQND"
     gene            5988..6809
                     /gene="menB"
                     /locus_tag="O6Y56_002206"
     CDS             5988..6809
                     /gene="menB"
                     /locus_tag="O6Y56_002206"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HDB5575449.1"
                     /translation="MTNRQWETLREYDEIKYEFYEGIAKVTINRPEVRNAFTPKTVAE
                     MIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRL
                     IRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLA
                     RIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALR
                     FLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP"
     gene            complement(7048..7377)
                     /gene="sspC"
                     /locus_tag="O6Y56_002207"
     CDS             complement(7048..7377)
                     /gene="sspC"
                     /locus_tag="O6Y56_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphostatin B"
                     /protein_id="HDB5575450.1"
                     /translation="MYQLQFINLVYDTTKLTHLEQTNINLFIGNWSNHQLQKSICIRH
                     GDDTSHNQYHILFIDTAHQRIKFSSIDNEEIIYILDYDDTQHILMQTSSKQGIGTSRP
                     IVYERLV"
     gene            complement(7415..8596)
                     /gene="sspB"
                     /locus_tag="O6Y56_002208"
     CDS             complement(7415..8596)
                     /gene="sspB"
                     /locus_tag="O6Y56_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine protease staphopain B"
                     /protein_id="HDB5575451.1"
                     /translation="MNSSCKSRVFNIISIIMVSMLILSLGAFANSNKAKADSHSKQLE
                     INVKSDKVPQKVKDLAQQQFAGYAKALDKQSNAKTGKYELGEAFKIYKFNGEEDNSYY
                     YPVIKDGKIVYTLTLSPKNKDDLNKSKEDMNYSVKISNFIAKDLDQIKDKNSNITVLT
                     DEKGFYFEEDGKVRLVKATPLPGNVKEKESAKTVSAKLKQELKNTVTPTKVEENEAIQ
                     EDQVQYENTLKNFKIREQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSE
                     QDLPNCATFPNQMIEYGKSQGRDIHYQEGVPSYEQVDQLTKDNVGIMILAQSVSQNPN
                     DPHLGHALAVVGNAKINDQEKLIYWNPWDTELSIQDADSSLLHLSFNRDYNWYGSMIG
                     Y"
     gene            complement(8678..9697)
                     /gene="sspA"
                     /locus_tag="O6Y56_002209"
     CDS             complement(8678..9697)
                     /gene="sspA"
                     /locus_tag="O6Y56_002209"
                     /EC_number="3.4.21.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu-specific serine endopeptidase SspA"
                     /protein_id="HDB5575452.1"
                     /translation="MKGKFLKVSSLFVATLTTATLVSSPAANALSSKAMDNHPQQTQS
                     SKQQTPKIQKGGNLKPLEQRERANVILPNNDRHQILDTTNGHYAPVTYIQVEAPTGTF
                     IASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEG
                     DLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKI
                     TYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNEFNGAVFINENVRNFLKQ
                     NIEDINFANDDQPNNPDNPNNPDNPNNPDEPNNPDNPDEPNNPDNPDNPDNGDNNNSD
                     NPDAA"
BASE COUNT         3304 a         1435 c         1760 g         3213 t
ORIGIN      
        1 catcgttaca tacctcattt ctctatatct tacgaactat atacccattc atatatgctt
       61 ttcaaacgtc attgtcacaa tttaattttt agggaatata atataaccat ctttatctgc
      121 ttttttagta aaaatgacaa aaatggcatg tattattgag atgatggtag ggatacctgt
      181 ccagaaaaat aataagtgaa aaagaccttg tccaaattta tcagcataaa atttatgaat
      241 acctaaacct ccaagaaata atgcaacaat aacataaatg gctttattga ctttcatttg
      301 taaatcctcc ttaactataa ttctacttaa attcgttgtg aaaaccaata tttctaactt
      361 tagaattttc aaactttcta aaattataag tatatctttt taaaataagg tagaatttct
      421 atataataaa tgttaataac gtaaaaggga atgatgacat agtgatacgt caagcacgtc
      481 cagaggaccg atttgatatt gcgaagttag tttatatggt ttgggatgat atggaattag
      541 aattggtaaa gcatctacct aaagacatag tattagatgc aattgaaaaa agctgtgttg
      601 atgcaacata tcgaactttt tatcagcata ttttagttta tgaagttgaa aataaagtag
      661 caggttgtat tattagctat agcggtgaaa atgaattgaa atatgaaaaa gcatgggaac
      721 tacttgactt gccagaagaa ataaaacaat atggcacgcc attacctgta aaagaagcta
      781 aagacgatga gtattatata gaaacaattg cgacatttga agcatataga ggtagaggca
      841 tcgcgacaaa gttattaacg tcattacttg aatcaaatac acatgttaaa tggagtttga
      901 attgcgatat taataatgaa gcagcattaa agttatataa aaaagtaggc tttatatctg
      961 atggacagat tgaattatac aagcacatgt atcatcattt aattgttaaa taaaaaactc
     1021 gacagttcga tgtaagtcga ttgccgagta gtatcatttt ctattaaatg cctgcaaata
     1081 atgcactaat ataaatacct aatgcatata ataaaccgaa aaatgtattt gttttaccag
     1141 cagcaaccat tgctggcatc attgtaggcg gtgtatcatt cttcttgaaa cgtctgataa
     1201 ctttaacagg cattgggaat gataacaacg caagtaagta aaataatgag ccaccaggtt
     1261 taataatgat cgtaagtaca ataaaggcat aagcgataaa gtacatgatt gccataaatg
     1321 ttaaagaagc atttttacct aatagaatgg gtaaagtttt acgaccactt gctttatctt
     1381 tgacacggtc gcgaatattg ttagccatat taattaaacc gatagtgatt actataggta
     1441 cacttagcca aattacatag ctttgaatat tgccagtttg aataaagaat gcaataacga
     1501 taataaacat acccataaat acgcctgaga ataattcacc gaaaggcgtc catgaaatag
     1561 ggaaagggcc acctgtatat aggtaaccaa cagccataca tactaatcca actggtaata
     1621 accaaaatga agagttagca gctaaaaaca aacctaatat tgctgctaag atgtaaaatg
     1681 caatggctaa tcgtagcaca agctctgggc tcataccgtt gcgtacaatt gcaccaccaa
     1741 tgcctacaga ttcatgatca tcaaggcctt ttttataatc atagtattcg ttaaacatat
     1801 tagttgctgc ttgaataagt aagcatgcta gtaacatggc aatgaatagg ctgattttaa
     1861 tatgatcttc gctaccaaga aaatatattt tagatgctgc tgtaccaact aaaacgggta
     1921 ctacggaagc agttaatgta tgaggacgca ttaaatgcca atatttctta actgtagaat
     1981 attgctgata ttgattactc attgaataca aaacctcttt aaatcatatt ttttataaca
     2041 aaaatatttt aatagaaagt agcataaagg tcaattgacg tgaaaaattg caagataagt
     2101 ttaagcaatt cttgtaacac aattatccaa aaatgataca atataataat gagtgaaaaa
     2161 agacgaagaa agaagtgaaa tggatggcta cgggcgtatt agaggacgat attgtcaaag
     2221 agatatatga cagctcaaag gaatgggttt cagttgaagt gaaattatca cagtcactag
     2281 acccgagcac attatttcat ctcactgaca atgaggcagg agatcgcttt tatatgcgtt
     2341 tgaatgataa tcgaacgtca tattttggct acaaagcaat tcaattattc aaaaataatt
     2401 ctaaaaataa acaatctatt tttaaagact gggaaaaatt aaaacataac atcacattta
     2461 tacatccgca atctgagaaa catcatcttc gagttgttgg aggattccaa ttttcaagtc
     2521 ataaatcaga tgatgaatgg cgagagttcg gactaaatca ttttgtatta cctgaagttt
     2581 taatttcaac tgataataat gggacatttt taacttatac agttaaaagg gaaagtttta
     2641 ctgttgaggc attgaacgat ttaatggatt tgttcaacaa tatatcggat atagatgtgg
     2701 acgagcaaat tggggaaatt actagaaatg aagatattta taaagatgac tggcgtcaac
     2761 ttgtagtaga agcaatagaa tctattaata atgaagaaaa aattgtacta gcacgtagac
     2821 ggttaataaa gttcgataaa gatatcagta ttccatatat tctaaagcaa gcatattcta
     2881 aagaaaaaaa cagttatata ttcttgttag aatcacaaga ttctatattc ttttcacaaa
     2941 cacctgaaca attaataaag gtcaataata aaatactatc gactaaagct gtagcaggta
     3001 caattaaacg ttcacaagat gaggacgaag atacaaaaaa tgttgaagca tttttaaaag
     3061 ataataaaaa cttaatcgaa catcgatttg ttgttgacag tattttacat gatattaaac
     3121 cttatatcac tgaattacat tatgataaga cgcctaaaat tctaaaaaat gatcatttat
     3181 atcacttgta cactgaaata aaggcgccac tgaaggatga ttcgtatatt agtttaattg
     3241 ataatttaca tccaacacct gctttaggtg gctatccaaa agaatttgcg atggatttta
     3301 ttgaacagaa agaatttggt acacgaggat tatatggtgc gccggttggc tatatagata
     3361 tatatgatga ttgtgaattt attgttgcaa ttcgttcgat gcttattaag aaagcacaag
     3421 caactttatt tgctgggtgt ggcattgtta aagattctga tccagatagt gaattggcag
     3481 aaacgaatct taagttcaca cctatgatga atgcattagg agtcgatatg aatgggaaat
     3541 cataaagcag ctttaacgaa gcaagttttt acatttgcat cagagttata tgcgtacggc
     3601 gtaagggaag tagttatcag tccgggatca cgctcaacgc cacttgcact tgcatttgaa
     3661 gcacatccaa atattaaaac atggatacac cccgatgagc gaagtgcagc gttttttgca
     3721 gttgggttaa ttaaaggcag tgaaagacct gtcgctatat tatgtacgtc aggtacagca
     3781 gcagcgaatt atacgcctgc aattgctgaa agccaaatta gtagaattcc attaatcgtt
     3841 ttaacaagtg accgtccgca tgaattaaga agtgttggcg caccacaagc gattaatcaa
     3901 gtaaatatgt ttaataatta tgtaagttat gagttcgata tgcctattgc ggatgatagt
     3961 aaagagacga ttgatgcaat ttattatcaa atgcaaattg ctagtcaata tttatatgga
     4021 ccacataaag ggccaattca ttttaacttg ccatttagag atccgttaac acctgatttg
     4081 aatgcaacag aattgttaac ttctgagatg aagattttac cgcactatca aaaaagtata
     4141 gatgcatcgg cattaagaca cattttaaat aagaaaaaag gtttaattat tgtaggggat
     4201 atgcagcacc aagaagttga tcaaatactg acgtattcaa cgatatatga tttgcctatt
     4261 ttagctgatc ctttaagtca tttaagaaaa tttgatcatc cgaatgttat ctgtacatat
     4321 gatttgttgt ttagaagcgg tttagactta aatgtggatt tcgtaattcg tgttgggaaa
     4381 ccagtgattt ctaaaaagtt gaatcaatgg ttaaagaaaa ctgatgcatt tcaaatatta
     4441 gtgcaaaaca atgataagat tgatgtcttt ccaatagcac cagatatttc atatgaaata
     4501 tctgcgaatg atttctttag gtcattaatg gaagacacga cagttaatcg cgtaagttgg
     4561 ttagaaaaat ggcaatgctt agagaaaaaa gggcgtaaag aaattaaatg ttatttagaa
     4621 caagctacag atgagagtgc attcgttggt gaattgatta agaaaacatc tgaaaaagat
     4681 gcattattta ttagtaatag tatgccaatc agagatgtag ataacttgtt attgaataaa
     4741 aatatagatg tttatgcgaa tcgtggtgcg aatggtattg atggtatcgt ttcaactgca
     4801 ctgggtatgg ctgtgcataa acgaataaca ttattgatag gtgatttgtc attttatcat
     4861 gatatgaatg gactattaat gtcaaaatta aataatattc agatgaatat tgtattattg
     4921 aacaacgatg gtggcggtat tttttcatat ttaccacaaa aagaaagtgc aaccgactat
     4981 tttgaacggt tgtttggcac accgacggga ttggatttcg agtatacagc taagttatat
     5041 caattcgatt ttaaacgttt taacagtgtt tcagaattta aaaatgccac attgttatct
     5101 gaaacttcga cgatttatga attgataacg aatcgcgaag ataactttaa acagcatcaa
     5161 attttatatc agaaattgag tgaaatgatt catgacacat tataattact atgaagcaaa
     5221 cgttgagacc aatcaagttt tagtattact gcatggtttt cttagcgaca gtcgtactta
     5281 tcataatcac atcgataaat atactaatat ctgtcatgtc atcactatag acttaccagg
     5341 acatggcgaa gatcagtctt caatggatga aacgtggaat tttgattata ttacgacgtt
     5401 gttagaccga attttagata aatataaaga taaatcaata acattgtttg gatattcaat
     5461 gggggggcgt gttgcattat attatgcaat taatggtcac atccctatat ctaatttgat
     5521 attagaaagt acgtcaccag gtattaaaga agaagcaaat caattggaac gccgtcttgt
     5581 tgatgatgca cgtgctaaag tattagacat agcaggtatt gaattatttg ttaatgattg
     5641 ggaaaagttg ccattatttc aatcgcaact agaattacca gttgaaatac aacatcaaat
     5701 aagacaacaa cgattgtctc aatcgccaca gaaaatggcc aaagcattaa gagattatgg
     5761 tacaggtcaa atgccaaact tatggccgcg cctgaaagaa attaaagtac caacattaat
     5821 attagctgga gaatatgatg aaaaatttgt acagattgcg aaaaaaatgg caaatttaat
     5881 tcctaatagt aaatgtaaat taatttctgc tacaggtcat acaattcatg tggaagatag
     5941 tgatgaattt gatacaatga tattaggata tttaaaggag gagcaaaatg actaacagac
     6001 aatgggaaac acttagagaa tatgatgaaa tcaaatatga attttacgaa gggattgcta
     6061 aggtaacaat aaatcgccct gaagtacgca atgcgtttac acctaaaaca gttgctgaaa
     6121 tgattgacgc attttcacgt gcacgtgatg atcaaaacgt ttcagttatc gtattaactg
     6181 gtgaaggtga tttagcattc tgttctggtg gtgaccagaa gaaacgtgga catggtggtt
     6241 atgtaggtga agaccaaatc cctcgcttaa atgtattaga tttacagcgt ttaattcgta
     6301 ttattccaaa accggttatc gcgatggtaa aaggatatgc tgtaggtggc ggtaatgtac
     6361 taaatgttgt ttgtgactta acgattgctg ctgataatgc tatttttgga caaactggtc
     6421 ctaaagtagg ttcatttgat gcgggttatg gttcaggata tttagcacgt atcgttggac
     6481 ataagaaagc acgtgaaatt tggtacttat gtcgtcaata caatgcacaa gaagctttag
     6541 atatgggtct agtaaataca gtggtacctt tagaaaaagt tgaagatgaa actgtgcaat
     6601 ggtgtaaaga gattatgaaa cactcaccaa cagctttacg attccttaaa gcagctatga
     6661 atgctgacac agatggttta gctggtttac aacaaatggc tggggatgca acattgcttt
     6721 attacacaac tgatgaagcg aaagaaggcc gtgatgcgtt taaagaaaaa cgtgatcctg
     6781 acttcgatca attccctaaa ttcccataag ttattttgaa tatgatatta agtcacttgc
     6841 gtcgtttatt agcgacgata agtggctttt ttattttata agaatttaaa aggggctttt
     6901 aattaattat cataaagata agatagtttg agaaaaatta atagagaaag aataaatgtt
     6961 aaagattatt attacaatga aaaaacgagc tggtgagaaa ttgaattctc gccaacccgc
     7021 tttatgaagt gaaatcattt aaattagtta tactaagcgc tcataaacga ttggtcgcga
     7081 agtgccaata ccttgtttgg atgacgtttg catgaggata tgctgagtat catcataatc
     7141 aagaatataa atgatttctt cattatcaat agatgaaaat ttaatacgtt gatgtgccgt
     7201 atctataaaa agaatatgat attgattgtg acttgtatca tcgccatgac gtatacaaat
     7261 tgatttttgt aattgatgat tactccaatt accaataaat aaattgatat ttgtttgttc
     7321 tagatgtgtg agtttggttg tgtcgtaaac taaatttata aattgtagtt gatacatagt
     7381 tttacctgcc tttaatcaat atctatatta ctttttagta acctatcatt gaaccatacc
     7441 agttataatc acgattgaat gataaatgta ataggcttga atctgcatct tggattgata
     7501 attctgtatc ccaaggattc cagtagataa gtttttcttg gtcattaatt ttagcattac
     7561 caacaactgc tagcgcatgt cctaaatgtg ggtcattagg gttttgagat acactttgtg
     7621 caagaatcat aattcctaca ttatcttttg taagttgatc aacttgttca tatgatggta
     7681 caccttcttg ataatgaata tctctgcctt gtgatttacc gtattcaatc atttgattag
     7741 ggaatgttgc acaattagga aggtcttgct cacttacttc agggtataat gtacgcataa
     7801 tatcatgtgc attataagtg tctgtatttt tagttgcatt taataatgct gccatactga
     7861 atcctgcaca ccatgagtta tcgaattgtt gttctctaat tttgaagttt tttaatgtgt
     7921 tttcatattg aacttgatct tcttgtatcg cttcgttttc ttcaacttta gtaggtgtta
     7981 ctgtattttt taactcttgt ttcaattttg ctgaaactgt tttagcactt tctttttctt
     8041 ttacattacc aggtagtggc gtagctttta ctaatctaac tttgccatct tcttcaaaat
     8101 aaaatccttt ttcatcagta agaacagtga tatttgaatt tttatcttta atttggtcta
     8161 aatctttagc aatgaagttt gaaattttaa cactgtaatt catgtcttct tttgatttgt
     8221 ttaaatcatc tttattttta gggctaagtg ttaaagtata aacaatttta ccgtctttta
     8281 taactggata atagtaacta ttatcttctt caccattaaa tttataaatt ttaaaagctt
     8341 cgccaagttc atatttacca gtttttgcat tactttgttt atctaatgct ttagcataac
     8401 cagcaaattg ttgttgtgct agatctttta ctttttgagg tactttgtca ctcttaacat
     8461 taatttctag ctgtttagag tgtgaatcag ctttggcttt attgctatta gcaaatgcgc
     8521 ctagtgataa aataagcatt gaaaccatta tgatgcttat aatattgaat actctagatt
     8581 tacatgaact attcatataa taccctccat ttaagtcaaa atattttgcg ttgctaagtc
     8641 tttgcttcta tttactaaat ccaaattaag atgaagttta tgcagcgtca gggttgtctg
     8701 aattattgtt atcgccattg tctggattgt ctggattatc agggttattt ggttcgtctg
     8761 ggttgtcagg gttatttggt tcatctgggt tgttagggtt gtcaggattg ttagggttat
     8821 ctggattatt aggttggtca tcgttggcaa aattgatatc ttcaatattt tgttttaaga
     8881 agttgcgtac attttcatta ataaataccg caccattaaa ctcatttggt acaccgcccc
     8941 aatgaattcc aatcacttca tttttctcat taaatactgg tgatccagag ttgccgccag
     9001 ttgtacttaa atcatattgc attgcttcac cttttaagta cgttattttt cctttacttt
     9061 cccacattgt tgcgacaggt ttatcacctg gatatcctgt tacagtaata ttttggttaa
     9121 cttgtgtttc agcattatta ctcattgttg ctggtttaac tacttcgcca atatgtttgt
     9181 tttgctcatt aggggagaat ttaactattg ctaaatcacc ttcgcctgaa tatttagtga
     9241 tttgttcagc agtgaaacca ccatttggat aattgtcttg gttaattgca gaagggaaag
     9301 cttttaaagc atgaggatca ccgtgcgtag catctacgac gtgtttattt gttaaaagtg
     9361 tatctttacc tacaactaca ccagaagcaa taaatgtacc agtaggtgct tcaacttgaa
     9421 tataagttac gggtgcataa tgaccattcg ttgtatctaa aatttggtgt cgatcattat
     9481 tcggtaatat aacatttgcg cgttcacgtt gttctaatgg tttaaggtta ccgccttttt
     9541 gaatcttagg tgtttgctgt ttgcttgact gcgtttgttg tggatgattg tccatagcct
     9601 ttgaagataa cgcgtttgct gcaggagaac tcacaagtgt cgctgttgtc aaagttgcaa
     9661 cgaataaaga actaactttt aaaaatttac ctttcatcta aaaacctcca aa
//
LOCUS       DALMNS010000103         9641 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.103, whole genome shotgun sequence.
ACCESSION   DALMNS010000103 DALMNS010000000
VERSION     DALMNS010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9641)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9641)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9641
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.103"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            19..912
                     /locus_tag="O6Y56_002210"
     CDS             19..912
                     /locus_tag="O6Y56_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDB5575453.1"
                     /translation="MKKTILLTMTTLTLFSMSPNSAQAYTNDSKTLEEAKKAHPNAQF
                     KVNKDTDAYTYTYDKNNAPNNNHQNQSRTNDNHQHANQRDLNNNQYHSSLSGQYTHIN
                     DAIDSHTPPQTSPSNPLTPAIPNVEDNDDELNNAFSKDNKGLITGIDLDELYDELQIA
                     EFNDKAKTADGKPLALGNGKIIDQPLITSKNNLYTAGQCTWYVFDKRAKDGHTISTFW
                     GDAKNWAGQASSNGFKVDRHPTRGSILQTVNGPFGHVAYVEKVNIDGSILISEMNWIG
                     EYIVSSRTISASEVSSYNYIH"
     gene            1243..2766
                     /locus_tag="O6Y56_002211"
     CDS             1243..2766
                     /locus_tag="O6Y56_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575454.1"
                     /translation="MSKKLKIIIPIIIVLLLIGGIAWGVYAFFANTPKNTYLKSEQQT
                     AKMYKDYFNDRFENEVKFQEKMKDNSFLSSLELSADASDEIVKGLGIPKSVVNASKIK
                     MSYGHDPKKEKSMINLEPTIADSALGKFQLAADKDKHYFESPLFKGKYSVNNSDLLST
                     YSKLTGEDEETAKENGITNQQLNLNTLFSNAQAQQSDYSKIAEKYSELIVDKLDDDNF
                     DKGKKEEIKVNGEKYKVRPVTLTLSRADTKKITLAVLEEAKKDKDLKKLMEEQGATKD
                     FDKDIKKAIDDVKETKKDEFAKIQSKIYTEKHTIVKREITITDKENNKTKIKGTNTLE
                     DDKLKLDYALDFDQDKYTYAEAKYTIKGVSSKEKDNKYNDKYEFGKKTEYDESKIKLD
                     NQEKVDGTKRQDKGKITVALDKYGDENEFTFENNIDSDVKNNTQKSTLNIGIKYAEEP
                     INFILKSSTKLKADIDFDDSGAKDFNSLSSKDREKLEKEIEKNGGKMFESILKKASK"
     gene            2834..4000
                     /locus_tag="O6Y56_002212"
     CDS             2834..4000
                     /locus_tag="O6Y56_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5575455.1"
                     /translation="MKTIHLFRIYHSFLLKKWYLIIYLLFILAALLITLTTIQHVTED
                     DNHFNIGVVDKDQSSETKLILNSIGKGSNLGKNVSIKAYDDKQAHTLLKQQKLQGYFV
                     FDKGMTKAFYKQGELPISVYTYDQQSMKSVVLSQLTDSVYQRLMRSMGGILAFQDLAP
                     KASHSDSINVMTDLLITGLNRSGAFNLEPIHLYDTGSYYAITGFLTTVFIFALSLFTV
                     LKMNQDTVLKARLKMFHFSKERLLIIRALITWFYTMLWSIVGVVWIIFSIPNTFELYN
                     WPTLAIHLSYYVTFLILWLLIIELLTTGLLNSISKVILTIVILVLSGLTIPTIFLQHI
                     ANGVFNIQPFAVVTNQLLEIILNNYILELHPSFYLIFIALLIINLAVLVWRYRQ"
     gene            3997..4917
                     /locus_tag="O6Y56_002213"
     CDS             3997..4917
                     /locus_tag="O6Y56_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5575456.1"
                     /translation="MKPYIQLVVFKQWLQYILLVTTIVIALVLIGMGYRVAHDNFKIP
                     ITIQDLDQTTASKSFVNKIKQSDYVTIKKVDEDESYIEDDVTKKEAILNMQIPKGFSQ
                     KLKENRLKETIQLYGRDDFIGGIAVEIVSSSLYEQQIPNIIYEHLEDMKQHQSIDAIN
                     KSYHKHTPESKIKFVSLTKQAQHSISISLIFAVILFVSAVQVVLHYRLNQQAALQRLS
                     QYHLSRFKLYSTYVMTHTILLLLVLLAVSLYLSQPLSLIFYLKSLLLILIYEIGIVFI
                     LFHIQTISHRLFMTFIYALAMGIVYLTIFM"
     gene            4931..5590
                     /locus_tag="O6Y56_002214"
     CDS             4931..5590
                     /locus_tag="O6Y56_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5575457.1"
                     /translation="MIEINNLSKRYRNKQIFNHLTMSFDSNRLTVLLGDNGAGKSTLL
                     RMIAGIEKANDGTINYFGEKWNQRQIQNHIGYVPQDIALFEHMTVAENIKFFKSLCKN
                     PINDTTINEYLQQLNFDDTSAKVSTLSGGNKRKINILVGLLGQPRILILDEPTVGIDL
                     KSRHDIHQLLNIMKSKCLIILTTHHLDEVEALADDIKLIGQDPFYQHVLEDKQWAYTY
                     Y"
     gene            complement(5643..6593)
                     /gene="lytM"
                     /locus_tag="O6Y56_002215"
     CDS             complement(5643..6593)
                     /gene="lytM"
                     /locus_tag="O6Y56_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine-glycine endopeptidase LytM"
                     /protein_id="HDB5575458.1"
                     /translation="MKKLTAAAIATMGFATFTMAHQADAAETTNTQQAHTQMSTQSQD
                     VSYGTYYTIDSNGDYHHTPDGNWNQAMFDNKEYNYTFVDAQGHTHYFYNCYPQNANAN
                     GSGQTYVNPATAGDNNDYTASQSQQHINQYGYQSNVGPDASYYSHSNNNQAYNSHNGN
                     GKVNYPNGTSNQNGGSASKATASGHAKDASWLTSRKQLQPYGQYHGGGAHYGVDYAMP
                     ENSPVYSLTDGTVVQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLTVSAGDKVKAGD
                     QIAYSGSTGNSTAPHVHFQRMSGGIGNQYAVDPTSYLQSR"
     gene            complement(6925..7917)
                     /locus_tag="O6Y56_002216"
     CDS             complement(6925..7917)
                     /locus_tag="O6Y56_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="linear amide C-N hydrolase"
                     /protein_id="HDB5575459.1"
                     /translation="MCTGFTIQTLNNQVLLGRTMDYDYPLDGSPAVTPRNYRWTSRTG
                     TTGQTQYGFIGTGTDMEGFIYGDGVNEHGVAISTQYFRGYSSYGSTHKADAMNITQNE
                     IVTWILGYTTSIEDMKQQASQIHVVAVYLNDIGEVPPLHYHVSDATGQSVEVSFKEGE
                     VVIKDNPIGVLTNHPDLDWHYSNLRQYINISPYPATANLLEGVTIEPLGNEAGTFGLP
                     GGFTSTERFVRMAFMKANIAQNNDKEMDLMNAFYLLDAVNIPIGIVRPHDADNHYTMY
                     QTVINLTTRTLYIKYYGSNEIVALKLTDDLINRKDMTIFKPEKHITIRKLNDNQ"
     gene            8151..9527
                     /locus_tag="O6Y56_002217"
     CDS             8151..9527
                     /locus_tag="O6Y56_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5575460.1"
                     /translation="MNNTQSSPRSNIIIAIMLSALTYWLFAQSFINIGPLVGQTYQTS
                     PAVLNLSISLTSFATGIFMVAAGDIADKIGQLRMTYMGLIISMFASLLLIISDITALL
                     IIGRILQGLSAAILLPSTVGVLNNQFKGDHLRRAISYLMISTVGGIGLAGVIGGLIAT
                     NFGWQTNFIISIVIAFIAILLLKGTPEKVSQHSHRHPFDYKGMSIFAVMIGSFTLLLT
                     QGFEQGWFSTFSFICLSIFIITTLIFIIIERRHEVPFIDFSVLRNRPFIGAFLNNFVL
                     NSGLGVTVVFFIYAQTHLGLSAAQSGLVTLPYAIVAVAMIRLGEKATLRFGGKLMLII
                     GPLFPVIGITIISMTSLQPSQYIIAVVIGFVICAIGNGLVATPGLTIAIFSMPNEKVG
                     LATGLYKMSGTLGGAFGIALSTTVFSMLQLNYAPSVAATVTFIVSIVLMILGSLSAYM
                     IIPKTVKS"
BASE COUNT         3273 a         1672 c         1544 g         3152 t
ORIGIN      
        1 aaggattaaa tggttattat gaagaaaaca attttactga cgatgacaac tcttacttta
       61 tttagtatgt cgcctaactc ggctcaagca tacacgaatg atagcaaaac attagaagaa
      121 gcaaagaaag cacacccaaa cgcacagttc aaagtgaata aagacaccga cgcgtatact
      181 tatacttatg acaaaaacaa cgcgccaaac aacaatcatc aaaatcagtc acgtacaaac
      241 gacaatcatc aacacgcaaa tcaacgtgat cttaacaaca atcagtacca ttcttcatta
      301 agtggtcagt atacgcacat taatgacgca attgattcac acacaccgcc tcaaacgtca
      361 ccaagcaatc ctttgacacc agcaataccg aatgtcgaag acaatgacga tgaattaaat
      421 aacgcttttt caaaagataa caaagggctt attacaggca tcgatttaga cgaattgtat
      481 gacgaattac aaatcgccga atttaatgac aaagcaaaga ctgctgacgg taaaccttta
      541 gcattaggta acggtaaaat cattgatcag cctcttatca caagtaagaa caacttatat
      601 actgctggac aatgtacatg gtatgtcttt gataaacgcg ccaaagatgg acacacgatt
      661 agtacatttt ggggggatgc taaaaactgg gcaggccaag cttcaagcaa tggcttcaaa
      721 gtagatagac acccaacacg aggatcaatt ttacaaacag taaacggtcc atttggccat
      781 gtagcctacg ttgagaaagt taatattgat ggaagtattc taatttcaga aatgaattgg
      841 attggtgaat atatcgtttc atcaagaacc atctctgctt cagaagtttc atcatataat
      901 tacatccatt aaattaatca tgacatcaat aaaaagcgac cagttctcag tttacaattc
      961 gtaacactgc aaaattggtc gctttatttt gtatgttatc cgattataaa atatgatgtc
     1021 taccttcaaa attgcaataa cttgtcacct taaacttaac caacattttt caagaatcat
     1081 tatgtaatca aactattttt tgtagtttat tagattttca ataacttatt aaacattatt
     1141 ataactaaaa ttctattaat ttaaacaaaa tttaaaataa accatttaat aaaatgtatt
     1201 gttctgatat gattaactca taaataattg ggaggaagca aaatgtctaa aaagttaaaa
     1261 attataattc ctattattat tgtcttatta ttaataggtg gaatcgcatg gggagtttat
     1321 gcattttttg caaacacacc gaaaaataca tacttaaaaa gtgaacaaca aactgcaaaa
     1381 atgtataaag attattttaa tgaccgtttt gagaacgaag tgaagttcca agaaaagatg
     1441 aaagataatt catttttatc ttcattagaa ttaagcgcag atgcatcaga tgaaattgtt
     1501 aaggggcttg gtattcctaa atctgttgtt aatgcttcta aaattaaaat gtcatatgga
     1561 catgatccta aaaaagagaa atcaatgatt aatcttgaac caacaatagc agactctgca
     1621 ttagggaaat tccagttagc tgcagataaa gataagcatt atttcgaatc accattattt
     1681 aaagggaaat atagtgttaa taattctgat ttattatcaa cttattcaaa acttacaggt
     1741 gaagatgaag aaacagcaaa agaaaatggt attacaaacc aacaactaaa tttaaatact
     1801 ctttttagta atgctcaagc acaacaaagt gactacagca aaattgccga aaaatattcc
     1861 gaacttattg tcgacaaatt agatgacgat aattttgata aaggtaaaaa agaagaaatt
     1921 aaggttaatg gtgaaaagta caaagttaga cctgtcacgt taacacttag cagagctgac
     1981 actaaaaaaa tcacattagc tgtattagaa gaagctaaaa aggataaaga ccttaaaaaa
     2041 ttaatggaag aacaaggtgc tacaaaagac tttgataagg acatcaaaaa agcaattgac
     2101 gatgtcaaag aaactaaaaa ggatgaattt gctaaaattc aatctaaaat ttataccgaa
     2161 aaacatacga ttgtaaaacg agaaattact attacagaca aagaaaataa taaaactaaa
     2221 atcaaaggta ctaatacttt agaagacgat aagttaaaac tagattacgc acttgatttc
     2281 gatcaagata aatacacgta tgctgaagcg aaatatacaa ttaaaggcgt atcttctaag
     2341 gaaaaagaca ataaatacaa tgataaatac gaatttggta aaaagacaga atatgatgaa
     2401 tcaaaaatca aattagataa ccaagaaaaa gtagatggca caaaacgtca agataaaggt
     2461 aaaatcactg tcgcattaga taaatatggc gacgaaaatg aattcacttt tgaaaataat
     2521 atagattctg acgtaaaaaa taacactcag aaatctacgt taaatattgg catcaaatat
     2581 gctgaagaac caattaattt cattttaaaa tccagcacaa aattgaaagc agatattgat
     2641 tttgatgata gtggtgcgaa agatttcaat agtctatctt caaaagaccg tgaaaaactt
     2701 gaaaaagaaa tcgaaaaaaa tggcggcaaa atgtttgaat caattttaaa aaaggcatct
     2761 aaataactaa aatataaaaa taagattgga aggtcatctt gcctttcaat cttatcattg
     2821 gaggagtggt taaatgaaaa caatacattt gtttcgcatc taccactctt ttttattgaa
     2881 aaagtggtat ttgattatct atttactatt tatattagcg gcactcctta ttacattaac
     2941 gacgatccaa catgtaacag aagatgacaa tcattttaat ataggtgtcg tagataaaga
     3001 tcaatcaagt gaaacgaaat taatcttaaa ctctattggt aaagggagta acctaggtaa
     3061 aaatgtgagc attaaagcat atgatgataa gcaagcacat actttgctaa aacagcagaa
     3121 acttcaaggc tactttgtct ttgataaagg tatgaccaag gcattttata aacaaggcga
     3181 actaccaatt tcagtatata catatgatca acaatccatg aaaagtgtcg tgctatctca
     3241 gctaacagat tctgtttacc aacgtcttat gcgatcaatg ggtggcatct tagcttttca
     3301 agacttagca ccgaaagcat cacattctga cagtatcaat gttatgactg atttgctgat
     3361 tacaggatta aaccgttcag gtgcatttaa cttagaaccg attcatttat acgatacggg
     3421 cagttattat gcaattacag gatttttaac aacggtattc atctttgcac tatctttatt
     3481 tacagttttg aaaatgaatc aagatactgt attgaaagcg cgattgaaaa tgtttcattt
     3541 ttctaaagag cgtttgttaa tcattcgtgc gttgattaca tggttttata ctatgttatg
     3601 gagtatcgtt ggtgtagttt ggattatatt cagtattccg aatacctttg aattatataa
     3661 ttggccaacg ttagccattc atttaagcta ttatgttacc tttttaatac tgtggttatt
     3721 aatcatcgaa cttttaacaa caggcttgtt gaatagtatt agtaaagtca tattaactat
     3781 tgtcatcctg gtgttatctg gtttaacaat acctacgatt tttttacaac atatagcaaa
     3841 tggcgttttc aatattcaac cattcgcagt tgtaacaaat caattgttag aaattatttt
     3901 aaacaactac attttagaac tgcaccctag tttctacctt atcttcatcg cacttttgat
     3961 aattaattta gctgtattgg tttggaggta tcgtcaatga agccttatat acaacttgtt
     4021 gtgttcaagc aatggttaca atacatcttg ctcgtaacaa ccattgtcat cgcactcgta
     4081 cttattggta tgggttaccg tgtagcacat gacaacttca aaataccgat taccattcaa
     4141 gatttagacc aaaccactgc atcaaaatca ttcgtcaata aaattaaaca atctgactat
     4201 gtaactatta aaaaagtcga tgaagatgaa agctatattg aggatgatgt tactaaaaag
     4261 gaagctattt taaatatgca aattcctaaa ggtttctctc aaaaattaaa agagaaccgt
     4321 ttaaaagaaa cgatacagtt atatggtaga gatgacttta taggtggtat tgctgtagaa
     4381 attgttagta gttcattata tgaacagcaa attcctaaca ttatttatga acaccttgag
     4441 gatatgaaac agcatcaatc catcgatgct atcaacaagt cctatcataa acatacacct
     4501 gaatctaaaa tcaaatttgt gtcgcttact aaacaagcac aacactctat ttcaattagc
     4561 ttaatctttg cggtgatttt atttgttagc gctgttcaag tagtacttca ttatcgttta
     4621 aaccaacaag cagcattgca acgattatca caatatcatt taagccgttt caaactatat
     4681 agtacttatg taatgacaca tacgatcttg ttattgttgg tactattggc agttagtcta
     4741 tatttgtctc aaccactcag cttaatattt tacttaaaat cactgttact tatattgatt
     4801 tatgagatag gtatcgtctt tatcttattc catattcaaa caataagtca tcgattattc
     4861 atgacattta tatatgcact tgctatgggt atcgtatact tgaccatttt catgtaaagg
     4921 agcgtaactg atgatagaaa ttaataacct ttcaaagcgt taccgtaaca aacagatttt
     4981 caatcattta accatgtcct ttgatagtaa tcgattaacc gtattacttg gtgataatgg
     5041 cgctggaaaa tcaacattac ttcgtatgat tgctggtatt gaaaaagcta atgatggaac
     5101 tatcaactat ttcggcgaaa aatggaatca aagacaaata caaaatcaca tcggttatgt
     5161 gccacaagac attgcgttat ttgaacacat gacagtggct gaaaacatta aattttttaa
     5221 atcactttgt aaaaatccaa ttaacgatac aactatcaac gaatatttac agcaattaaa
     5281 ctttgatgat acgtctgcca aagtatctac attgtctggt gggaataaac gtaaaattaa
     5341 tatattagta ggtttactag gtcaacctcg aattctcatt ttagatgaac caacagttgg
     5401 tattgattta aaatctagac atgacatcca ccaactactt aacattatga aatctaaatg
     5461 tttaattata ttaactaccc atcatttaga tgaagttgaa gcacttgcag atgatatcaa
     5521 gttaattggc caagatcctt tttatcaaca tgttttagag gacaagcaat gggcttatac
     5581 ctattattaa aacgaaaaaa atcccaagtt gcgtatgata tcgtaacttg ggatttactg
     5641 tattatctac tttgtaagta tgacgttggg tctactgcat attgattacc gatgccacca
     5701 gacatacgtt ggaagtgtac gtgtggtgct gttgaattac ccgtactacc tgaatatgca
     5761 atttggtcac cagctttgac tttatcacca gctgaaacag ttaaacgatt attatgcata
     5821 taccattggt agttattact gttcgcttct ttaatcgtta cttgattacc gccaccatag
     5881 ttactccaac ctgcttgtac tactgtacca tcagttaatg agtaaactgg tgaattttca
     5941 ggcattgcat agtcgacacc gtaatgcgca ccaccaccgt gatattgtcc atatggttgt
     6001 agttgtttac gacttgttaa ccagcttgca tctttcgcat gaccactagc tgtcgcttta
     6061 cttgctgatc cgccattttg attagatgtg ccattagggt aattgacctt tccattacca
     6121 ttatgactgt tatacgcttg gttgttgtta ctatgtgaat aatagctcgc gtctgggcct
     6181 acatttgatt gataaccata ttgattaatg tgttgttggc tttgactcgc tgtgtagtca
     6241 ttgttatctc ctgctgttgc tggattcaca tatgtttgac cgcttccatt agcatttgca
     6301 ttttggggat aacagttata aaaataatgc gtatgtcctt gtgcatctac gaatgtatag
     6361 ttatattctt tattatcaaa cattgcttga ttccagttac catcaggtgt gtgatgataa
     6421 tccccattag aatcaattgt ataataagta ccataagata cgtcttgtga ttgtgttgac
     6481 atttgtgtat gtgcttgttg ggtgtttgtc gtttctgctg catctgcttg atgcgccatt
     6541 gtaaatgtag cgaagcccat cgttgcaatc gctgctgctg ttaatttttt catgtataaa
     6601 acatcctcca ttaaagttaa agttaaagtt agttttcaat taaactgtac tgcacatact
     6661 aaaagaatta gacaactgag taaaggattt aattctcatt ttccaactat ttaatattcc
     6721 cgaaatgttt tactaaactc attacattgt cattacaaaa tagccataca ttgatattaa
     6781 aatgacatct ctcactgcat tcgtttaacc ttttataaat tttcaaaatt aacaactaat
     6841 cattcgtcca tgttcgcggt tcaacgttaa tgtatgatag taatcatcca tcaaatcata
     6901 tcaaccaaat tccactatca atcgctattg attgtcattc aactttctaa tagtgatatg
     6961 cttctcaggc ttaaaaatcg tcatatcttt tctattaatt aaatcatctg tgagctttaa
     7021 tgctactatt tcattgctgc cataatactt aatatataac gttcttgtag ttaaatttat
     7081 tacggtctga tacatcgtat agtgattgtc agcatcatgc ggacgtacaa ttccaatcgg
     7141 tatatttacc gcatctaata aataaaatgc attcattaaa tccatttctt tatcattgtt
     7201 ttgagcaatg tttgctttca taaatgccat tctcacaaag cgctcagttg aagtaaatcc
     7261 acctggcaat ccaaatgtac ctgcttcatt gcctaaaggt tcaatcgtta caccttccaa
     7321 taaatttgct gttgctggat aaggagaaat attgatatat tgtcttaaat tactataatg
     7381 ccaatctaag tctggatgat ttgttaagac accgataggg ttatctttta taaccacttc
     7441 accctcttta aatgaaactt cgactgattg tccagttgca tcggaaacat gataatgcaa
     7501 tggcggaact tcaccgatat catttaaata tacagctaca acatgtattt gggatgcttg
     7561 ttgtttcata tcttctatgc ttgttgtata tcccaaaatc catgtcacaa tttcattttg
     7621 cgtaatattc atcgcgtccg ctttgtgtgt tgagccatat gaactataac ctcggaaata
     7681 ttgtgttgaa atggcaacgc catgttcatt aacaccatca ccataaataa aaccttccat
     7741 atctgttcct gtaccaataa agccatattg cgtttggcct gtcgtgccag tgcgagatgt
     7801 ccaacgataa tttctaggcg tcactgctgg cgaaccatct aatggataat cataatccat
     7861 cgtgcgtcca agaagtactt gattatttaa agtttgtatt gtgaatcctg tgcacattgt
     7921 tctcactcct ctgtaccttc atttacttta atcactttca aataaagctg tttcacttaa
     7981 acatactata aaaaatcaat catacaagca attaattgat attcattctc aataactgtg
     8041 gtatgatatg taaggaaatc atgacttatg tgtgagtgaa cgatcatcta tacatccgtt
     8101 cacttcatct catgactttc tatatttaat ttttacaagg agtgacatct gtgaataaca
     8161 cacaatcttc accacgcagt aatattatta ttgcgattat gttgtctgca ttaacatatt
     8221 ggttgtttgc acaatcattt attaatatag gacctctcgt tggtcaaacg tatcaaacct
     8281 ctcctgccgt gttaaattta tctattagtt taacttcctt cgccacaggt atcttcatgg
     8341 tggctgcagg tgatattgct gataaaatag gacaactgag aatgacatac atgggtctca
     8401 taatcagtat gtttgcatct cttctattaa ttatatcgga catcactgca ctgctcatca
     8461 tcggtagaat tttacaaggt ctatcagcag ctatcttgtt accttcaaca gtgggcgttt
     8521 taaataatca atttaaagga gatcatttaa gacgagcgat tagttatcta atgattagta
     8581 ctgttggtgg catcggccta gctggtgtta tcggcggttt aattgccaca aatttcggat
     8641 ggcaaactaa tttcatcatt agtatagtca ttgctttcat tgccatattg cttctaaaag
     8701 gcacacctga aaaagtaagt caacatagcc atcgtcatcc attcgattac aaaggtatgt
     8761 ctattttcgc tgttatgatt ggtagcttta cattattgtt aacacaagga ttcgaacaag
     8821 gttggtttag tactttttca ttcatttgtc tgagcatttt tatcatcact acgttgatat
     8881 tcatcatcat cgaacgtcga catgaagtac cttttattga tttctcagta ttacgcaacc
     8941 gtccgttcat tggtgcattt ttaaataact ttgttttaaa tagtggtctg ggcgtaacag
     9001 tggtcttttt catatatgct caaacacacc ttggtttatc agctgcacaa tctggacttg
     9061 ttacattgcc atatgccatt gtggcagttg cgatgattcg tttaggtgaa aaagcaacat
     9121 tacgtttcgg tggcaaattg atgctcatca ttggtccgtt gttccctgtc atcggcatca
     9181 ctattattag catgacatca cttcaaccat cacaatatat cattgctgtt gttattgggt
     9241 ttgtcatttg cgcaatcgga aatggtttag tcgcaacacc cggtcttaca attgcaattt
     9301 tcagtatgcc taatgaaaaa gttggtttag ctacaggatt atataaaatg agtggcacac
     9361 taggtggcgc ctttggtata gcactaagta ctacagtttt cagtatgtta caactaaact
     9421 atgcaccaag tgtagctgca actgtaacat ttatcgtcag cattgtatta atgatactcg
     9481 gctcattgtc tgcatacatg atcattccaa aaacagttaa atcttaaata taatagaaga
     9541 atcatgtttc gaaatatctg tatcacttta aaatgatatg catcaatttc tataaaaata
     9601 agcgaagaac attttttatt gttcttcgca tactctaatt a
//
LOCUS       DALMNS010000104         9568 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.104, whole genome shotgun sequence.
ACCESSION   DALMNS010000104 DALMNS010000000
VERSION     DALMNS010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9568)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9568)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9568
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.104"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(136..975)
                     /gene="noc"
                     /locus_tag="O6Y56_002218"
     CDS             complement(136..975)
                     /gene="noc"
                     /locus_tag="O6Y56_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion protein"
                     /protein_id="HDB5575461.1"
                     /translation="MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQP
                     RQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVI
                     IRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIA
                     NKLRLLKLAPKVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRV
                     RQKTGPEKVKAQNLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRI
                     YKR"
     gene            complement(1018..1737)
                     /gene="rsmG"
                     /locus_tag="O6Y56_002219"
     CDS             complement(1018..1737)
                     /gene="rsmG"
                     /locus_tag="O6Y56_002219"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDB5575462.1"
                     /translation="MTVEWLAEQLKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSI
                     TDEHDVYLKHFYDSIAPSFYFDFNQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSL
                     NKRIQFLNHLASELQLQDVSFIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLP
                     LVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPEDAGERQMFIIDKKR
                     QTPKKYPRKPGTPNKTPLLEK"
     gene            complement(1737..3614)
                     /gene="mnmG"
                     /locus_tag="O6Y56_002220"
     CDS             complement(1737..3614)
                     /gene="mnmG"
                     /locus_tag="O6Y56_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501497.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDB5575463.1"
                     /translation="MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMP
                     CNPSVGGPAKGIVVREIDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLY
                     QQEMKRVIEDEENLHIMQGMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGE
                     IILGNMKYSSGPNHQLPSITLSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPG
                     DDVGRAFSFETTEYILDQLPCWLTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPS
                     IEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMM
                     RAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAGKV
                     LNTGEKILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDMGY
                     ELGMISEERYARFNEKRQQIDAEIKRLSDIRIKPNEHTQAIIEQHGGSRLKDGILAID
                     LLRRPEMTYDIILEILEEEHQLNADVEEQVEIQTKYEGYINKSLQQVEKVKRMEEKKI
                     PEDLDYSKIDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLIYLEQGKLQRVS
                     D"
     gene            complement(3681..5060)
                     /gene="mnmE"
                     /locus_tag="O6Y56_002221"
     CDS             complement(3681..5060)
                     /gene="mnmE"
                     /locus_tag="O6Y56_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDB5575464.1"
                     /translation="MDLDTITSISTPMGEGAIGIVRLSGPQAVEIADKLYKGKHLLND
                     VPSHTINYGHIIDPESKEVVEEVMVSVLRAPKTFTREDIIEINCHGGILTINRVLELT
                     MTYGARMAEPGEFTKRAFLNGRIDLSQAEAVMDFIRSKTDRASKVAMNQIEGRLSDLI
                     KKQRQSILEILAQVEVNIDYPEYDDVEDATTEFLLEQSKEIKQEINHLLDTGAQGKIM
                     REGLSTVIVGKPNVGKSSMLNNLIQDNKAIVTEVAGTTRDVLEEYVNVRGVPLRLVDT
                     AGIRETEDIVEKIGVERSRKALSQADLILFVLNNNEALTQEDYTLYEVVKNEDVIVIV
                     NKMDLEQNIDINEVKDMIGDTPLIQTSMLKQEGIDELEIQIRDLFFGGEVQNQDMTYV
                     SNSRHISLLKQARQTIQDAIDAAESGVPMDMVQIDLTRTWEILGEIIGETASDELIDQ
                     LFSQFCLGK"
     gene            complement(5204..5557)
                     /gene="rnpA"
                     /locus_tag="O6Y56_002222"
     CDS             complement(5204..5557)
                     /gene="rnpA"
                     /locus_tag="O6Y56_002222"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDB5575465.1"
                     /translation="MLLEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFR
                     LGISVSKKLGNAVLRNKIKRAIRENFKVHKSHILAKDIIVIARQPAKDMTTLQIQNSL
                     EHVLKIAKVFNKKIK"
     gene            complement(5678..5815)
                     /gene="rpmH"
                     /locus_tag="O6Y56_002223"
     CDS             complement(5678..5815)
                     /gene="rpmH"
                     /locus_tag="O6Y56_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000240855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDB5575466.1"
                     /translation="MVKRTYQPNKRKHSKVHGFRKRMSTKNGRKVLARRRRKGRKVLS
                     A"
     gene            6546..7907
                     /gene="dnaA"
                     /locus_tag="O6Y56_002224"
     CDS             6546..7907
                     /gene="dnaA"
                     /locus_tag="O6Y56_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDB5575467.1"
                     /translation="MSEKEIWEKVLEIAQEKLSAVSYSTFLKDTELYTIKDGEAIVLS
                     SIPFNANWLNQQYAEIIQAILFDVVGYEVKPHFITTEELANYSNNETATPKETTKPST
                     ETTEDNHVLGREQFNAHNTFDTFVIGPGNRFPHAASLAVAEAPAKAYNPLFIYGGVGL
                     GKTHLMHAIGHHVLDNNPDAKVIYTSSEKFTNEFIKSIRDNEGEAFRERYRNIDVLLI
                     DDIQFIQNKVQTQEEFFYTFNELHQNNKQIVISSDRPPKEIAQLEDRLRSRFEWGLIV
                     DITPPDYETRMAILQKKIEEEKLDIPPEALNYIANQIQSNIRELEGALTRLLAYSQLL
                     GKPITTELTAEALKDIIQAPKSKKITIQDIQKIVGQYYNVRIEDFSAKKRTKSIAYPR
                     QIAMYLSRELTDFSLPKIGEEFGGRDHTTVIHAHEKISKDLKEDPIFKQEVENLEKEI
                     RNV"
     gene            8185..9318
                     /gene="dnaN"
                     /locus_tag="O6Y56_002225"
     CDS             8185..9318
                     /gene="dnaN"
                     /locus_tag="O6Y56_002225"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000969809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDB5575468.1"
                     /translation="MMEFTIKRDYFITQLNDTLKAISPRTTLPILTGIKIDAKEHEVI
                     LTGSDSEISIEITIPKTVDGEDIVNISETGSVVLPGRFFVDIIKKLPGKDVKLSTNEQ
                     FQTLITSGHSEFNLSGLDPDQYPLLPQVSRDDAIQLSVKVLKNVIAQTNFAVSTSETR
                     PVLTGVNWLIQENELICTATDSHRLAVRKLQLEDVSENKNVIIPGKALAELNKIMSDN
                     EEDIDIFFASNQVLFKVGNVNFISRLLEGHYPDTTRLFPENYEIKLSIDNGEFYHAID
                     RASLLAREGGNNVIKLSTGDDVVELSSTSPEIGTVKEEVDANDVEGGSLKISFNSKYM
                     MDALKAIDNDEVEVEFFGTMKPFILKPKGDDSVTQLILPIRTY"
BASE COUNT         3076 a         1753 c         1397 g         3342 t
ORIGIN      
        1 attgatttat gtaccagcct gatcaacata taaatataaa tttttatgtt tcacgtaaaa
       61 caaaaaaaga caaagctgtt attatcttag ctttgtcttt tatgtgttag tcatcatgta
      121 tacgacatcc tactactaac gtttatatat tcgaattttt atttcataat aatcttcatg
      181 atctttgtct ttatgctcaa catgtaatcc tgtttgttga atcgcttgga tacttttgcc
      241 tacctcatct cgtgcttgag tgacatcttg tgcaaagcga aggttttgtg ctttgacttt
      301 ttcgggcccc gttttttggc gtactctatc ttcagtctgt ttcacattta gtttttgtgc
      361 aatgacttgc tcaatcaacg cttcttgttc gctatcagac aatgataata ccgctctcgc
      421 atggcgttca gtaattttac cttctcttaa gcgaagtagt actttcggcg ccaacttcaa
      481 taaacgcaac ttatttgcaa taaagctttg acttttacct aaactttttg ccaattcact
      541 ttgcgttgta tcaccaattt ccaataattt cttataggct tccgcttctt caacaacaga
      601 caaattttct ctttgaatat tctcaattaa tgccacaaca gccgtctctt catcatccat
      661 atcacgaata ataacgtctg cttgaggtaa atttagtgat tgtattgctc taaatcggcg
      721 ctctccagca ataatttcaa acatatcttc ttcaatcggt cttacaacaa taggctgtaa
      781 taaaccatgt tcatgtattg attcagcaag ttctttaatt ttatttggtt caaacacctg
      841 tcttggttga taacggttgg gaacgatacg ttcaatttga atggattcaa cattactatt
      901 gcgatcttct tcaatatgtc caatgatgtc atctttgttt ttcaaaccaa ataattttga
      961 aaaaggtttt ttcattatcc attcgctcct tttatgttag ttgtaaagga ttatgcatta
     1021 tttttcaagt aaaggagtct tattaggcgt ccctggtttt cttggatact ttttcggcgt
     1081 ctgtcttttt ttatcaataa tgaacatctg gcgctctcca gcatcttctg gcaattcaaa
     1141 ggtatgtgtt tctgtaacgt taccacctaa cacactaatt gcaaattttg cttcttctaa
     1201 ttcttcttca ccttttgaag attttaatgc aacaaactgt ccaccttttt taactagcgg
     1261 taaacacaat tcactcaaca cggataatct agctactgct cttgcagtaa caacatcata
     1321 agactccctg tagacaccct taccaaatgt ttctgctcta tcgtgtataa agctgacatc
     1381 ctgtaattgt aattctgacg ctaaatggtt taaaaattga atacgcttat ttaatgaatc
     1441 aacaatcgtc acttttaact gcggaaacat tatttttaac ggaatacttg gaaaaccagc
     1501 tccagcgcct acatcacata tacttatagg ctgattaaaa tcaaaataaa aactaggtgc
     1561 aatggaatca taaaaatgtt tcaaatatac atcgtgttca tctgtaatac ttgtcaaatt
     1621 catcttttca ttccattcaa caagtaaacg ataatatgtt tgaaactgtt gtttttgagt
     1681 ctcagttaat tcaatattat gttcttttaa ttgttctgct aaccattcta cagtcattag
     1741 tcactcaccc tttggagttt accttgttct aagtaaatca ataatataga tatgtctgct
     1801 ggatttaccc ctgatattct agaagcttgt gcaatattta aaggttttac ttctgataat
     1861 ttttctcgcg cttcagtcgc caaactatca atcttactat aatctaagtc ttctggaatt
     1921 ttcttttctt ccatacgctt aactttctca acttgttgta gtgatttatt gatataacct
     1981 tcatattttg tttgtatttc tacttgttct tcaacatctg cattcaattg atgttcttct
     2041 tctaaaattt ctaaaattat atcgtaagtc atttcaggtc tgcgtaataa atcgatagct
     2101 aaaataccat cttttaagcg agaaccacca tgttgttcaa taatcgcttg cgtatgttcg
     2161 tttggtttaa tacgaatatc tgataaacgc ttaatttccg catcaatttg ctgacgtttt
     2221 tcattaaaac gtgcatatcg ttcttcagaa atcataccaa gttcatatcc catatccgtc
     2281 aatctcaaat cagcattatc atgacgtagt aacaaacgat attctgcacg tgatgttagt
     2341 aaacgataag gttcattagt acctttagtt acaagatcat cgattaatac accaatatat
     2401 gcatctgaac gacttaatat cttttcgcct gtgtttaaca ctttacctgc agcgttaata
     2461 cctgccatca atccttgtcc tgctgcttct tcataaccag aagtaccatt aatttgacct
     2521 gcagtgtata agtttttaat cattttcgtt tcaagtgtag gccataactg cgttggcaca
     2581 atcgcatcat attcaattgc gtagccggca cgcatcatat ctgctttttc aagacctggt
     2641 atcgtctcta acatttgacg ttgcacatgt tcaggaagac ttgtagacaa tccttgtaca
     2701 tatacttcat ttgtattacg accttcaggc tctaagaaaa gttgatgtcg cggcttatca
     2761 ttaaaacgaa caaatttatc ttcaattgaa gggcaataac gtggcccggt tcctttaatc
     2821 atccctgaat acattgcaga tagatgtaaa ttatcatcga taactttgtg tgtttcagca
     2881 ttagtatacg ttaaccaaca tggcaattga tctaatatat attctgttgt ttcaaagctg
     2941 aatgcacgac ctacatcgtc acctggttgt atttcagtct tcgaatagtc aattgttttt
     3001 gaatttacac gcgggggtgt acctgtttta aaacgaacaa tatcaaaacc aagttctctt
     3061 aaattgtctg ataatgtgat tgatggtaat tggtgatttg gtccacttga atacttcata
     3121 ttacctaaaa tgatttcacc acgtaaaaat gttcccgttg taataattac tgctttagat
     3181 aaatactctg taccaatatt tgtacgtaca cctttaactt cattatcttc tataataagt
     3241 tcgtctacca taccttgcat tatatgcaaa ttttcttcat cttcaatcac gcgtttcatt
     3301 tcttgttgat aaagtacttt atctgcttgc gctcttagtg ctcttacagc aggtccttta
     3361 ccagtattta acattctcat ttgaatgtgt gttttatcga ttgtttttgc catttgtcca
     3421 cctaaagcat caatttcacg aacaacgata cctttagctg gtccacctac agatgggtta
     3481 catggcataa atgcaatatt atctaaattt attgttagca ttaatgtttt agcaccacgt
     3541 cttgcagatg ctaaacctgc ttctacacct gcatgtcccg cacctataac gattacatca
     3601 tattcttgaa ccacaatata aacctcctta tttgatatct tactagcctt cttaagacgg
     3661 tattccgtct atttcaatta ctatttacct aagcagaatt gactgaataa ctgatcgatg
     3721 agttcatcac ttgcagtctc accaataatt tctcctaata tttcccaagt tctagttaaa
     3781 tcaatttgta ccatatccat aggcacacca gattctgctg catcaatcgc atcttgtatc
     3841 gtttgtcttg cttgttttaa taatgaaata tgtcttgaat tagaaacata agtcatatct
     3901 tgattttgta cttctccacc aaagaacaaa tctcgaattt gtatttctaa ttcatcaata
     3961 ccttcttgtt ttaacattga agtttgaatt aatggcgtat cgcctatcat atctttaact
     4021 tcattaatat ctatattttg ctctaaatcc attttattaa caattacgat tacatcttca
     4081 tttttaacca cttcatataa tgtgtaatct tcttgagtca atgcttcgtt attgtttaat
     4141 acaaataaaa ttaagtctgc ttggctaaga gcctttctag agcgttcaac accaatcttc
     4201 tctactatat cttctgtctc acgtatacca gcagtatcaa ctaatcttaa tggcacgcca
     4261 cgaacattga cgtactcttc taagacatct ctagtcgtac ccgctacctc agttacaatc
     4321 gctttattat cttgtattaa attatttaac atcgatgatt tacctacgtt tggtttacca
     4381 acaataactg tagataaacc ttcacgcata attttaccct gcgcaccggt atctaataaa
     4441 tgattaattt cctgtttgat ttctttagac tgctctaaaa gaaattcagt agtcgcatct
     4501 tcaacatcat cgtattcagg ataatcaata ttcacttcca cttgagcgag tatctctaat
     4561 atagattgac gttgtttttt gattaagtca cttagacgac cttcaatttg attcatcgca
     4621 actttagaag ctctatctgt tttcgagcga ataaagtcca taactgcttc agcttgagat
     4681 aaatcaatac gaccatttaa aaaggcacgt tttgtaaatt cacctggctc agccattcta
     4741 gcgccatatg tcatagtaag ttccagtact ctattaatag ttaaaatacc accatgacaa
     4801 ttaatttcta taatatcttc gcgtgtaaat gtttttggcg ctcttaacac agacaccata
     4861 acttcttcaa ccacttcttt agactctgga tcaataatat gaccgtaatt aatcgtatgt
     4921 gatggaacat catttaaaag atgttttcct ttatataatt tgtcagcaat ttcaacggct
     4981 tgcggtccag acaatcgaac aattccaatt gccccttcac ccattggtgt tgaaatactc
     5041 gtaattgtat ctaaatccat attgctactc gcctccttca acgatgtgaa tacattttaa
     5101 agtaagttat tatatccctg aggttagtct tacgcttgtc tgaggtaaga cttcggtatg
     5161 tgttgagtgg ttaatgtttt actccctttc ccctacccta tccttactta atctttttat
     5221 taaaaacttt ggcaatttta agtacgtgct caagactatt ctgtatttgt aaagtcgtca
     5281 tatctttagc tggctgtctt gctattacaa taatatcttt ggccaatata tgcgacttat
     5341 gtactttgaa attttcacgt attgctcttt ttatcttgtt tcttaacact gcattaccta
     5401 gttttttaga aacactaata cctaagcgaa aatggtctat ttctttatta ttacaagtgt
     5461 atacaacaaa ttgtctgttg gctacagaat gacctttttt atatattctc tgaaaatctg
     5521 cattcttttt aattcggtaa gctttttcca ataacatcac tcgcttattt atcgttttta
     5581 tttgaagcta tatttaaact tctattgagc ttataacata aatttctatt tattcttaat
     5641 ttaaacgaaa aaaaagatca ctgatgagtc agtgatctta tgcagataaa actttacggc
     5701 ctttacgacg acggcgcgct aaaactttac ggccattttt tgtgctcatg cgttttctga
     5761 aaccatgaac tttactatgt ttacgtttat ttggttgata agtacgtttt accatgcaaa
     5821 acacctccat ctttatacag ttatctaata taccagatta tgcagactct gatcacttta
     5881 atagataaga ttttgcgttt cttagattaa aattctcgta ttagctcatt gattatctag
     5941 tcataattca agcaactact acaatataac aaaatccttt ttataacgca agttcatttt
     6001 atactactgc tcaatttttt tacttttatc gattaaagat agaaatacac gatgcgagca
     6061 atcaaatttc ataacatcaa catgagtttg ctccgaaaca tgagtgttta caatatttga
     6121 ataccttata cagttcttat acatacttta taaattattt cccaagctgt tttgatacac
     6181 acactaacag atactctata gaaggaaaag ttatccactt atgcacattt atagttttca
     6241 gaattgtgga taattagaaa ttacacacaa agttatacta tttttagcaa catattcaca
     6301 ggtatttgac atatagagaa ctgaaaaagt ataattgtgt ggataagtcg tccaactcat
     6361 gattttataa ggatttattt attgatattt acataaaaat actgtgcata actaataagc
     6421 aggataaagt tatccaccga ttgttattaa cttgtggata attattaaca tggtgtgttt
     6481 agaagttatc cacggctgtt atttttgtgt ataacttaaa aatttaagaa agatggagta
     6541 aatttatgtc ggaaaaagaa atttgggaaa aagtgcttga aattgctcaa gaaaaattat
     6601 cagctgtaag ttactcaact ttcctaaaag atactgagct ttacacgatc aaagatggtg
     6661 aagctatcgt attatcgagt attcctttta atgcaaattg gttaaatcaa caatatgctg
     6721 aaattatcca agcaatctta tttgatgttg taggctatga agtaaaacct cactttatta
     6781 ctactgaaga attagcaaat tatagtaata atgaaactgc tactccaaaa gaaacaacaa
     6841 aaccttctac tgaaacaact gaggataatc atgtgcttgg tagagagcaa ttcaatgccc
     6901 ataacacatt tgacactttt gtaatcggac ctggtaaccg ctttccacat gcagcgagtt
     6961 tagctgtggc cgaagcacca gccaaagcgt acaatccatt atttatctat ggaggggttg
     7021 gtttaggaaa aacccattta atgcatgcca ttggtcatca tgttttagat aataatccag
     7081 atgccaaagt gatttacaca tcaagtgaaa aattcacaaa tgaatttatt aaatcaattc
     7141 gtgataacga aggtgaagct ttcagagaaa gatatcgtaa tatcgacgtc ttattaatcg
     7201 atgatattca gttcatacaa aataaagtac aaacacaaga agaatttttc tatactttta
     7261 atgaattgca tcagaataac aagcaaatag ttatttcgag tgatcgaccg ccaaaggaaa
     7321 ttgcacaatt agaagatcga ttacgttcac gctttgaatg ggggctaatt gttgatatta
     7381 cgccaccaga ttatgaaact cgaatggcaa ttttgcagaa gaaaattgaa gaagaaaaat
     7441 tagatattcc accagaagct ttaaattata tagcaaatca aattcaatct aatattcgtg
     7501 aattagaagg tgcattaacg cgtttacttg catattcaca attattagga aaaccaatta
     7561 caactgaatt aactgctgaa gctttaaaag atatcattca agcaccaaaa tctaaaaaga
     7621 ttaccatcca agatattcaa aaaattgtag gccagtacta taatgttaga attgaagatt
     7681 tcagtgcaaa aaaacgtaca aagtcaattg catatccgcg tcaaatagct atgtacttgt
     7741 ctagagagct tacagatttc tcattaccta aaattggtga agaatttggt gggcgtgatc
     7801 atacgaccgt cattcatgct catgaaaaaa tatctaaaga tctaaaagaa gatcctattt
     7861 ttaaacaaga agtagagaat cttgaaaaag aaataagaaa tgtataagta ggaaactttg
     7921 ggaaatgcaa tctgttatat aacagcacta ataataacta tcatttttta catttctata
     7981 tgctaatgtg gcaagatgag caaaactcat tttgtggata atgtttaaaa gtcatacaca
     8041 ccatacacaa gttatcaaca tgtgtataac ttcgccaaat ctatgttttt aagacttatc
     8101 caccaatcca cagcacctac tactattact aagaacttaa aacctatata attatatata
     8161 aacgactgga aggagtttta attaatgatg gaattcacta ttaaaagaga ttattttatt
     8221 acacaattaa atgacacatt aaaagctatt tcaccaagaa caacattacc tatattaact
     8281 ggtatcaaaa tcgatgcgaa agaacatgaa gttatattaa ctggttcaga ctctgaaatt
     8341 tcaatagaaa tcactattcc taaaactgta gatggcgaag atattgtcaa tatttcagaa
     8401 acaggctcag tagtacttcc tggacgattc tttgttgata ttataaaaaa attacctggt
     8461 aaagatgtta aattatctac aaatgaacaa ttccagacat taattacatc aggtcattct
     8521 gaatttaatt taagtggctt agatccagat caatatcctt tattacctca agtttctaga
     8581 gatgacgcaa ttcaattgtc ggtaaaagtg cttaaaaacg tgattgcaca aacgaatttt
     8641 gcagtgtcca cctcagaaac acgcccagta ctaactggtg tgaactggct tatacaagaa
     8701 aatgaattaa tatgcacagc gactgactca caccgcttgg ctgtaagaaa gttgcagtta
     8761 gaagatgttt ctgaaaacaa aaatgtcatc attccaggta aggctttagc tgaattaaat
     8821 aaaattatgt ctgacaatga agaagacatt gatatcttct ttgcttcaaa ccaagtttta
     8881 tttaaagttg gaaatgtgaa ctttatttct cgattattag aaggacatta tcctgataca
     8941 acacgtttat tccctgaaaa ctatgaaatt aaattaagta tagacaatgg ggagttttat
     9001 catgcgattg atcgtgcatc tttattagca cgtgaaggtg gtaataacgt tatcaaatta
     9061 agtacaggtg atgacgttgt tgaattatct tctacatcac cagaaattgg tactgtaaaa
     9121 gaagaagttg atgcaaacga tgttgaaggt ggtagcctga aaatttcatt caactctaaa
     9181 tatatgatgg atgctttaaa agcaatcgat aatgatgagg ttgaagttga attcttcggt
     9241 acaatgaaac catttattct aaaaccaaaa ggtgacgact cggtaacgca attaatttta
     9301 ccaatcagaa cttactaaaa ataaatataa ataaaggatg acgtgattaa ttaaaacgtc
     9361 atcctttatt ttttggcaaa aataattcta gattcgtata taaaataaat ttgacagcat
     9421 tttaaacagc aaataaaaga cgccaattaa atttatgaca aatgtatcca aaatttaata
     9481 agtgtgctta tatgcccttt aaatttaaaa ttttaatagt caataacaag ttgaatacaa
     9541 aagttaaacg ccgttaaata gcgttaaa
//
LOCUS       DALMNS010000105         9352 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.105, whole genome shotgun sequence.
ACCESSION   DALMNS010000105 DALMNS010000000
VERSION     DALMNS010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 9352)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9352)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9352
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.105"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(84..899)
                     /gene="phnE"
                     /locus_tag="O6Y56_002226"
     CDS             complement(84..899)
                     /gene="phnE"
                     /locus_tag="O6Y56_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HDB5575469.1"
                     /translation="MTQEIAKYNVHTKAHKRKLIKRWLIAIVVLAIIIWAFSGVPSLE
                     LKSKSLEILKSIFSGLFHPDISYIYIPDGEDLLRGLLETFAIAVVGTFIAAIICIPLA
                     FLGANNMVKLRPVSGVSKFILSVIRVFPEIVMALIFIKAVGPGSFSGVLALGIHSVGM
                     LGKLLAEDIEGLDFSAVESLKASGANKIKTLVFAVIPQIMPAFLSLILYRFELNLRSA
                     SILGLIGAGGIGTPLIFAIQTRSWDRVGIILIGLVLMVAIVDLISGSIRKRIV"
     gene            complement(896..1696)
                     /gene="phnE"
                     /locus_tag="O6Y56_002227"
     CDS             complement(896..1696)
                     /gene="phnE"
                     /locus_tag="O6Y56_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HDB5575470.1"
                     /translation="MPIETPTKYDSLLKKKVSLKTSFTFMLIIVLIIWSFIYTGFNFG
                     DLMIGIPQIGDLFKQMIPPDFEYLQQITTPMLDTIRMAIVSTVLGSIVSIPIALLCAS
                     NIVHQKWISIPSRFILNIVRTIPDLLLAAIFVAVFGIGQIPGILALFILTICIIGKLL
                     YESLETIDPGPMEAMTAVGANKIKWIVFGVVPQAISSFMSYVLYAFEVNIRASAVLGL
                     VGAGGIGLFYDQTLGLFQYPKTATIILFTLVIVVVIDYISTKVRAHLA"
     gene            complement(1698..2471)
                     /gene="phnC"
                     /locus_tag="O6Y56_002228"
     CDS             complement(1698..2471)
                     /gene="phnC"
                     /locus_tag="O6Y56_002228"
                     /EC_number="7.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HDB5575471.1"
                     /translation="MSQIEFKNVSKVYPNGHVGLKNINLNIEKGEFAVIVGLSGAGKS
                     TLLRSVNRLHDITSGEIFIQGKSITKAHGKALLEMRRNIGMIFQHFNLVKRSSVLRNV
                     LSGRVGYHPTWKMVLGLFPKEDKIKAMDALERVNILDKYNQRSDELSGGQQQRISIAR
                     ALCQESEIILADEPVASLDPLTTKQVMDDLRKINQELGITILINLHFVDLAKEYGTRI
                     IGLRDGEVVYDGPASEATDDVFSEIYGRTIKEDEKLGVN"
     gene            complement(2685..3641)
                     /locus_tag="O6Y56_002229"
     CDS             complement(2685..3641)
                     /locus_tag="O6Y56_002229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HDB5575472.1"
                     /translation="MKKFKCLFVLMLAVIVFAAACGNSSSLDNQKNASNDSDSKSGGY
                     KPKELTVQFVPSQNAGTLEAKAKPLEKLLSKELGIPVKVSVSTNYNTIVEAMKSKKVD
                     VGFLPPTAYTLAHDQKAADLLLQAQRFGVKEDGSASKELVDSYKSEILVKKDSKIKSL
                     KDLKGKKIALQDVTSTAGYTFPLAMLKNEAGINATKDMKIVNVKGHDQAVISLLNGDV
                     DAAAVFNDARNTVKKDQPNVFKDTRILKLTQAIPNDTISVRPDMDKDFQEKLKKAFID
                     IAKSKEGHKIISEVYSHEGYTETKDSNFDIVREYEKLVKDMK"
     gene            3870..5414
                     /locus_tag="O6Y56_002230"
     CDS             3870..5414
                     /locus_tag="O6Y56_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDB5575473.1"
                     /translation="MKKIYKSLTVSAIVATVSLSALPQSLAITHESQPTKQQQTVLFD
                     RSHGQTAGAADWVSDGAFSDYADSIQKQGYDVKAIDGHSNITEASLKSSKIFVIPEAN
                     IPFKESEQAAIVNYVKQGGNVVFISDHYNADRNLNRIDSSEAMNGYRRGAYEDMSKGM
                     NAEEKSSTAMQGVKSSDWLSTNFGVRFRYNALGDLNTSNIVSSKESFGITEGVKSVSM
                     HAGSTLAITNPEKAKGIVYTPEQLPAKSKWSHAVDQGIYNGGGKAEGPYVAISKVGKG
                     KAAFIGDSSLVEDSSPKYVREDNGEKKKTYDGFKEQDNGKLLNNITAWMSKNNDGKSL
                     KASGLTLDTKTKLLDFERPERSTEPEKEPWSQPPNGYKWYDPKTFKAGSYGSEKGADP
                     QPNTPDDHTPPNQNVKISFDIPQNVSINEPFEVTIHLKGFEANQTLENLRVGIYKEGG
                     RQIGQFSSKDNDYNPPGYSTLPTVKADENGNATIKVNAKVLESMEGSKIRLKLGDKTL
                     ITTDFK"
     gene            5465..7000
                     /locus_tag="O6Y56_002231"
     CDS             5465..7000
                     /locus_tag="O6Y56_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HDB5575474.1"
                     /translation="MSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRR
                     QYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNRMSFDFGTLGNHEFNYGLPY
                     LKDTLRRLNYPVLCANIYENDSTLSDNGVQYFQVGDQTVGVIGLTTQFIPHWEQPEHI
                     QSLTFHSAFETLQQHLPEMKRHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLE
                     AFSKEIDIFITGHQHRQIAERFKDTAVIQPGTRGTTVGKVVLSTDEYENLSVESCELL
                     PVIDDPTFTIDEDDQHIRKQLEDWLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYA
                     LLEKSGADVACTALFDSASGFKQVVTMRDVINNYPFPNIFKVLAVSGAKLKEAIERSA
                     EYFDVKNDEVSVSADFLEPKPQHFNYDIYGGLSYTIHVGRPKGQRVSDMMIQGHAVDL
                     KQTYTICVNNYRAVGGGQYDMYIDAPVVKDIQVEGAQLLIDFLSNNNLMRIPQVVDFK
                     VEK"
     gene            7157..7924
                     /locus_tag="O6Y56_002232"
     CDS             7157..7924
                     /locus_tag="O6Y56_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016170495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575475.1"
                     /translation="METIKQEVRESIVKGIIAGYKDYVNERNEVKKRMVISDAYVHTK
                     SNHIENQVAKHLENFVKYIKENAGPSWKYLKFIFNKDEEKNNIMFILKNEDYFDEKNV
                     SVGKSLVADKNPKSKNYLEVLMAKNRDINFGTVEEDFEIGHQMTADSILFNIKEGSNR
                     DINSYFLIITYRIDKESKQLAAIKQWLPNPETNSAIMVDDLTELIEKVIVEREDYHID
                     EEELEVLKNDGELELIDVEHAFGINIDEGNDMIESER"
     gene            7930..9105
                     /locus_tag="O6Y56_002233"
     CDS             7930..9105
                     /locus_tag="O6Y56_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001625397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDB5575476.1"
                     /translation="MFIGKNLEYVRKLNALSRKELSEKINVSEQAIWQYETKNMMPEI
                     SKIYDMTSIFNVKSSYFISEQPEELLINSVDKHSIAFRAKNYKVSTKLLNKQYYQAMY
                     LSNLTSYLFSFVKIPDNIILSLINNLDGLLNGNLESLNKKESIKEIAKVVRAKILQDE
                     SNEALLFMLEKAGIVIYEKRINDSIDAYSFWSKDLTPFIILGTNKGVAVRRNFDLAHE
                     LGHLVLHRHIQFDLLSPEEYKTIEHEADIFASEFLLPEEAFKKDFDQMTKKSNPDYLA
                     VLKEKWYVSIQAIAMRAYYLGLMSSTQYRYFWASLNKKGYKSKEPLDDVIEMSRPVKM
                     NSLLKLYFDRNILTPQKLLNYLKVDETFLNHLAGINLKLFKDYVNENREYNITNLYK"
BASE COUNT         3250 a         1432 c         1656 g         3014 t
ORIGIN      
        1 tagttttctt cactgctgtt tttattataa tagagaaacg taagacggta ggacctctta
       61 tttaggagta tcctgattta atgttaaaca atacgttttc ggattgaacc ggaaattaaa
      121 tcgacaattg cgaccattag tactaaaccg attaatataa tacctacacg gtcccaagaa
      181 cgtgtttgaa tggcaaatat gagtggtgtc ccgataccac cagccccaat cagccccagt
      241 atagaagctg aacgtaagtt tagttcaaag cgataaagta tgagtgatag aaaggcaggc
      301 ataatttgtg gtatgactgc aaatacgagt gttttaattt tatttgcacc actggccttt
      361 aatgattcta cagcactgaa atctagacct tcaatatctt cagctaaaag tttcccaagc
      421 atacctacgg aatggatacc taaagctaat acacctgaaa atgaacctgg gccaacagct
      481 ttgataaata taagtgccat tacaatttct gggaagacac gtataacact taaaatgaat
      541 ttgctaacac ctgaaactgg gcgtaacttt accatattat ttgcacctag aaatgctaat
      601 ggaatacaga taattgcggc gatgaaagta cctacaacgg ctatcgcaaa ggtttcaagt
      661 aaaccacgta ataagtcttc gccatctggt atatagatat agctgatatc aggatggaat
      721 aatccgctga atatggattt taagatttct aatgatttac ttttaagttc taaacttggt
      781 acacctgaaa atgcccagat gataatagct aagacgacaa ttgcaataag ccatctttta
      841 atcaattttc gtttgtgtgc ttttgtgtga acattatatt ttgctatttc ctgtgtcatg
      901 cgagatgtgc cctcactttc gtactgatgt aatcaatgac gacgacgata actaaagtaa
      961 ataaaataat cgttgctgtt tttggatatt gaaataaacc aagtgtttga tcataaaaca
     1021 atccaatacc gccagcgccg actaatccaa gcacagctga agcacgtata tttacttcaa
     1081 atgcatataa tacgtatgac ataaatgacg atatggcttg tggtacaaca ccgaaaacaa
     1141 tccattttat tttattagcg ccaacagccg tcattgcttc cattggacct ggatctatcg
     1201 tttccaatga ttcatataat aattttccaa taatacagat agttaaaata aacaatgcta
     1261 atatccctgg aatttgaccg attccaaata cagccacaaa gattgcagct aatagcaaat
     1321 ccggtatagt acgaactata tttaaaataa aacgcgaggg tattgaaatc cacttttgat
     1381 gaacgatatt gctagcacat aataacgcaa ttggtattga aacgatgcta cctaatactg
     1441 tacttacgat agccattcga atggtatcta acattggcgt tgtaatttgt tgtaaatact
     1501 cgaaatcagg tggaatcatt tgtttgaata gatcacctat ttgaggtatt cctatcatta
     1561 aatctccaaa attaaacccc gtataaatga agctccaaat gataagcaca atgattaaca
     1621 tgaaggtaaa actcgttttt aaagaaacct ttttctttaa aagggagtca tactttgtag
     1681 gtgtttctat aggcatgtta gttcactcct agcttttcat cttctttaat tgtacgtcca
     1741 tatatttcac taaatacgtc atctgttgct tcagatgcag gaccatcata gacaacctca
     1801 ccatcacgta aaccaatgat gcgtgtgcca tattcttttg ccaagtcaac aaaatgtaaa
     1861 ttaattaaaa ttgtgatgcc taattcttgg ttgatttttc ttaaatcatc cataacctgt
     1921 ttcgttgtta atgggtctaa tgaagcaact ggttcatctg caagaataat ttcggattct
     1981 tggcatagcg cacgtgcaat agatatacgt tgttgttggc cacctgataa ttcatcagag
     2041 cgttgattat atttatctaa gatgttgacc cgttctagtg catccattgc tttaattttg
     2101 tcttcttttg gaaataaacc taataccatt ttccaagtag ggtgataacc tacacgtcca
     2161 cttagtacat ttcgtaatac acttgaccgt ttaactaaat taaaatgttg gaaaatcatg
     2221 cctatatttc ggcgcatttc taataatgct ttaccatggg ctttagtgat tgatttacct
     2281 tgaatgaaaa tttcacctga cgtgatatca tgcaaacgat ttacagatct taataacgtg
     2341 gatttcccag caccagatag tccgacaatg actgcaaatt cacctttttc aatatttaag
     2401 ttaatatttt tcaagcctac atgaccgtta ggatagactt tactgacgtt tttaaattcg
     2461 atttgactca tgtttgacac ctttctttaa taaagaaaag ccaaggtaaa ctgaaatatc
     2521 atagacattg ggtttctgtg tacaaatggt ttcaaatgta cagcgacacc tttctatatc
     2581 tgtttcagtt tagcgcctag cttttcaata ttaatctaga atatatctat tgaacgaaag
     2641 cttttaatac caaattcgat aatgattcat ttgttaaata atgattattt catatcttta
     2701 actaattttt cgtactctct tacaatgtcg aaatttgaat ctttcgtttc tgtgtatcct
     2761 tcatgtgaat aaacttcgct aataattttg tgaccttctt ttgatttagc aatgtctata
     2821 aaagcttttt tcaatttctc ttggaaatct ttatccatat ctggtcttac agaaattgtg
     2881 tcattcggaa tagcttgtgt taattttaaa attcgtgtgt ctttaaatac atttggttgg
     2941 tcttttttca cagtattacg tgcatcgtta aatacagccg cagcatctac atctccattt
     3001 aataatgaga taactgcttg gtcatgacct ttaacattca caattttcat atctttagtt
     3061 gcattaatac ctgcttcgtt ttttaacatc gcaagtggga atgtatatcc agcagttgat
     3121 gttacatctt gtaaggcaat tttcttacct tttaaatctt tcaagctttt aatttttgag
     3181 tcttttttaa caagaatttc tgatttataa ctatctacaa gttctttact tgctgaacca
     3241 tcttctttta caccaaaacg ttgtgcttgt aataataaat cagccgcttt ttgatcatgt
     3301 gctaatgtgt atgccgttgg tggtaagaac ccaacatcaa cttttttaga cttcatagct
     3361 tcaacaattg tattgtagtt agttgataca gacactttaa ctggaattcc taattcttta
     3421 gatagtaatt tttctaatgg ttttgcttta gcctctaatg ttccagcatt ttgcgaaggt
     3481 acaaattgta ctgttaattc tttaggtttg tatcctcctg atttagaatc cgaatcatta
     3541 ctagcgttct tttgattatc taaagaactt gaatttccac atgctgctgc aaaaacaatg
     3601 actgctaaca ttaatacaaa taaacactta aattttttca tttgataact gtccccttca
     3661 cattcttaat cgtgtaatat gtatgcaatg aaattacact tatagcgtac cacatttaaa
     3721 tgcgaaaaag tattttataa aaatgaattt taataacttt ctttaagagt ttgataagat
     3781 tttgtaaata tttcgttaaa ttgcccattt caaacatata tttatcctat aattcaagaa
     3841 caaatttatt ttaaaaggag cctcacaaaa tgaaaaaaat atataagtca ttaactgtct
     3901 ctgcaattgt tgcaacggta tcattaagtg ctttaccgca atctttagct ataacgcatg
     3961 aatcacaacc tacaaagcaa cagcaaacgg tattattcga tcgttcccat ggtcaaacag
     4021 ctggtgctgc agattgggtt agtgatggtg cattttcaga ttatgcggat tcaatacaaa
     4081 aacaaggtta tgacgttaaa gctattgatg gtcattcgaa cataacagaa gcaagtttga
     4141 aaagttccaa aatatttgta attcctgagg ctaacattcc tttcaaagaa tcagaacagg
     4201 cagcaattgt taactatgtg aaacaaggtg gaaatgttgt ctttatttca gatcattaca
     4261 atgctgaccg aaatttaaat cgtattgatt catcggaggc aatgaatggt tatcgacgtg
     4321 gagcgtatga agatatgtcg aaaggtatga atgcagaaga aaaaagttct actgcaatgc
     4381 aaggtgtgaa aagttcagat tggttatcta caaactttgg cgtacgtttt cgatataatg
     4441 cactaggtga tttaaatacg agcaatattg tttcttcaaa agaaagtttc ggtattactg
     4501 aaggtgtgaa atctgtatct atgcatgctg gatcgacatt agcaattact aatccagaga
     4561 aagcaaaagg tattgtgtat acaccagaac aattgccagc gaaaagtaaa tggtcacatg
     4621 ctgtagatca aggtatttat aatggcggcg gtaaagcaga aggtccctat gtagcaattt
     4681 ctaaagttgg aaaaggtaaa gcagcattta tcggtgattc atcacttgtg gaagatagtt
     4741 cgcccaaata tgtaagagaa gataatggag aaaagaagaa aacatatgat ggttttaaag
     4801 aacaagacaa cggtaagcta ttaaataata taacggcttg gatgtctaaa aataatgatg
     4861 ggaaatcact taaggcgagt ggcctaacat tagatacaaa gactaagttg cttgattttg
     4921 aacgaccaga gcgttcaact gagcctgaaa aagagccatg gtcacaaccg cctaatggtt
     4981 ataaatggta tgacccaaaa acatttaaag caggtagtta tggcagtgaa aaaggcgcag
     5041 atcctcagcc aaacacacca gatgatcata cgccaccaaa tcagaatgta aaaatatcat
     5101 ttgatatccc gcaaaatgtt tctataaatg agccatttga agtgacaata catttaaaag
     5161 gatttgaagc aaatcaaaca cttgaaaatc ttagagttgg tatttacaaa gaaggcggac
     5221 gtcaaatcgg acaattttca agtaaagata acgattataa cccgccaggt tacagtactt
     5281 tgccaacagt taaagcagat gaaaacggaa atgccacaat taaggtcaat gctaaagtac
     5341 ttgaaagtat ggaaggttca aagattcgtt taaaactcgg tgacaaaacc ttgattacaa
     5401 cagacttcaa ataaatatat aatagaaata agaaagatgt ttgtgattga aggagtgagt
     5461 gaggatgtca aacatagcat tttatgtcgt gagtgacgta catggttata ttttcccaac
     5521 agattttacg agtagaaatc aatatcaacc tatgggattg ttactagcga atcatgttat
     5581 agaacaagac agaaggcagt atgaccaaag ttttaaaata gataatggtg attttttgca
     5641 agggtcacca ttttgtaatt acttaatcgc gcatagcggc agtagccagc ctttagttga
     5701 tttttataat cgaatgtcat ttgactttgg tacgcttggt aatcatgaat ttaattatgg
     5761 attaccatac ttaaaagaca ctttacgcag actcaattat ccagttttgt gtgctaatat
     5821 ttatgaaaat gatagtacat tgagtgataa cggtgtgcag tattttcagg ttggagatca
     5881 aacggttggt gtgataggtt taacgacaca atttattccc cattgggaac aaccagagca
     5941 tattcagtca cttacgtttc atagtgcttt tgaaacactt caacaacact tgcctgaaat
     6001 gaagcgacat gcagatatca ttgtggtttg ttaccatggt ggatttgaaa aggatttaga
     6061 aagtggtacg ccgaccgaag tgttaacggg tgaaaatgaa ggatatgcca tgttagaagc
     6121 gttttctaaa gaaatagata tctttattac tggtcaccag catcgacaaa ttgctgaaag
     6181 gtttaaggat acggctgtga ttcaacctgg tacaagaggt acaactgtag gaaaagttgt
     6241 cttgagtact gatgaatatg aaaatctatc cgttgaatca tgtgaattac ttcctgttat
     6301 agatgatccc acatttacta ttgatgaaga tgaccaacat atacgaaagc agttagagga
     6361 ctggttagat tacgaaatta ctacattgcc atatgatatg acgattaatc atgcatttga
     6421 ggcacgtgta gctccgcatc cttttacaaa ttttatgaat tacgctttat tagaaaaaag
     6481 tggtgcagat gttgcctgta cagctttgtt tgattctgct agtggtttca agcaagtcgt
     6541 gacgatgcga gatgttatta acaattaccc atttccaaat atatttaaag ttttagctgt
     6601 aagtggtgcc aaacttaaag aagccattga acgatcagca gaatattttg acgtgaaaaa
     6661 tgatgaagtt agtgtgagcg cagacttcct tgaacccaaa ccacaacact ttaattatga
     6721 tatatatggt ggcttaagtt ataccattca tgttggaaga ccaaagggac aacgtgtgag
     6781 tgatatgatg attcaaggtc acgcagttga tttaaagcag acatatacaa tttgtgtaaa
     6841 taattatcgt gcagttggcg gtggtcagta tgatatgtat atcgacgcgc cagttgtaaa
     6901 agatattcaa gttgaaggcg cacaattact tattgatttt ttatcaaata ataatttgat
     6961 gcgtatcccg caagttgttg attttaaagt tgaaaagtga cggatatatg taaaacttac
     7021 ttgattttaa tcgggtaagt ttttgttttt gtttaaacta atcactatta aacaccaata
     7081 tactttaagg aaaatgttga ttttacaaaa aatgaggctt atattttata taacttaata
     7141 ttatgaagtg attaatttgg aaacaattaa acaagaagta agagaatcta ttgttaaagg
     7201 aattatcgcg ggatataagg actatgttaa tgagagaaat gaagtcaaga aacgtatggt
     7261 gattagtgat gcctatgtgc acaccaaatc taatcatatt gaaaatcaag ttgctaagca
     7321 tttggaaaat tttgttaagt atattaaaga aaatgctgga ccatcatgga agtatttaaa
     7381 gtttatattt aataaagatg aagagaaaaa taatatcatg tttatattga aaaatgaaga
     7441 ttactttgat gaaaaaaatg taagcgtagg gaagagttta gttgctgata aaaatccaaa
     7501 aagtaaaaac tacctagagg tacttatggc taagaatagg gacattaatt ttggtactgt
     7561 tgaagaagat tttgaaattg ggcatcaaat gactgcagat agtatattat ttaatataaa
     7621 agaaggcagt aatagagata ttaattctta ttttttaatt attacatatc gtattgataa
     7681 agaatcaaag caattagctg caatcaaaca atggttacca aatccagaaa caaattctgc
     7741 aattatggtt gatgatttga cagagttaat tgaaaaagta atagtagaaa gagaagatta
     7801 tcatattgac gaagaagagt tagaagtact taaaaacgat ggagagttag aactcataga
     7861 tgtggaacat gcatttggta tcaatatcga tgaaggtaac gatatgattg aaagtgaaag
     7921 gtgaagttaa tgtttattgg caagaattta gaatacgtga ggaagcttaa tgctctaagt
     7981 agaaaagaat tatcagaaaa aataaatgtg agtgaacaag caatttggca atatgaaaca
     8041 aaaaatatga tgccagaaat tagtaaaatt tatgatatga catctatttt taatgttaaa
     8101 tctagctact ttattagcga gcagcccgaa gagctcctaa taaattctgt cgataaacat
     8161 agtatagctt ttagagcaaa aaattataaa gtatctacga aactattaaa taagcaatat
     8221 tatcaagcaa tgtatttatc taatttaact agctacttat tttcttttgt aaagataccg
     8281 gataatatta ttttatcttt aataaataat ttagatggct tgttgaatgg caatttagaa
     8341 tcactaaata aaaaagaaag cataaaagaa attgctaaag ttgtgagggc taaaattctt
     8401 caagacgaaa gcaatgaagc actattattt atgcttgaaa aagcgggtat agtcatatac
     8461 gaaaagcgaa ttaatgatag catagacgca tatagttttt ggagtaaaga tctgacacct
     8521 tttattatac tgggtacaaa taagggggta gcagttagaa ggaattttga tcttgcacat
     8581 gagctgggac atctcgttct acatcgtcat attcaattcg acttattatc tcctgaagaa
     8641 tataagacaa ttgaacatga ggcagatatt ttcgcctctg aatttttact acctgaagaa
     8701 gcgtttaaaa aagactttga tcaaatgaca aaaaaatcaa atcctgatta tttagctgta
     8761 ttgaaagaaa aatggtatgt ttctatacaa gcaattgcaa tgagagccta ttatctaggt
     8821 ctaatgtcta gtactcagta cagatatttt tgggcatcat taaataaaaa aggctataaa
     8881 agtaaagagc ctttagacga cgtgattgaa atgtcacgtc ctgtcaaaat gaatagttta
     8941 ttaaagttgt attttgatag aaatatactg acaccacaaa aattattgaa ttatttaaaa
     9001 gttgatgaaa catttttgaa tcatctagca ggtattaatt taaaactctt taaggattat
     9061 gttaatgaaa atagagaata taatataacg aatctatata aataaggcac taatatttaa
     9121 acctcgagct gaaaagatca tcatttcagt tcgaggtttt ttatttgtaa catctattga
     9181 taggtatcga caagaacctt ttaatgttgt gttttgtgcg atataacaag ctttttaggc
     9241 tattaaagaa tattcagaat taaatatata attatgaata aattatgtca ttgaaaaaat
     9301 tatgattata aaatcattct aaaaacaccg aaataacaat gatttcatga aa
//
LOCUS       DALMNS010000106         8794 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.106, whole genome shotgun sequence.
ACCESSION   DALMNS010000106 DALMNS010000000
VERSION     DALMNS010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8794
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.106"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..731
                     /locus_tag="O6Y56_002234"
     CDS             <1..731
                     /locus_tag="O6Y56_002234"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HDB5575477.1"
                     /translation="LLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQ
                     YKEQMKQFKQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNP
                     DSRRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASY
                     ALLTHLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSIF
                     DINYEDLEIVDYESHPAIKAPIAV"
     gene            931..1410
                     /locus_tag="O6Y56_002235"
     CDS             931..1410
                     /locus_tag="O6Y56_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HDB5575478.1"
                     /translation="MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMG
                     RKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEM
                     IDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK"
     gene            1425..2264
                     /gene="fakB2"
                     /locus_tag="O6Y56_002236"
     CDS             1425..2264
                     /gene="fakB2"
                     /locus_tag="O6Y56_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid kinase binding subunit FakB2"
                     /protein_id="HDB5575479.1"
                     /translation="MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDI
                     TSEEFINHIENDEDVKTSQPAIGEFISAYEELGKDGAEIISIHLSSGLSGTFNTAYQA
                     SQMVDANVTVIDSKSISFGLGYQIQHLVELVKEGVSTSEIVNKLNHLRENIKLFVVIG
                     QLNQLIKGGRISKTKGLIGNLMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEF
                     IGDHEIKSVGVAHANVIEYVDKLKKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVV
                     LKK"
     gene            2354..2887
                     /gene="msrA"
                     /locus_tag="O6Y56_002237"
     CDS             2354..2887
                     /gene="msrA"
                     /locus_tag="O6Y56_002237"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDB5575480.1"
                     /translation="MTKEYATLAGGCFWCMVKPFTSYPGIKSVVSGYSGGHVDNPTYE
                     QVCTNQTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYH
                     DEHQKKAAEFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKKNPVHYYQYQR
                     GSGRKAFIESHWGNQNA"
     gene            2880..3308
                     /gene="msrB"
                     /locus_tag="O6Y56_002238"
     CDS             2880..3308
                     /gene="msrB"
                     /locus_tag="O6Y56_002238"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HDB5575481.1"
                     /translation="MLKKDKSELTDIEYIVTQENGTEPPFMNEYWNHFAKGIYVDKIS
                     GKPLFTSEEKFHSECGWPSFSKALDDDEIIELVDKSFGMLRTEVRSEESNSHLGHVFN
                     DGPKESGGLRYCINSAAIQFIPYEKLEELGYGDLISHFDK"
     gene            3320..3820
                     /locus_tag="O6Y56_002239"
     CDS             3320..3820
                     /locus_tag="O6Y56_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HDB5575482.1"
                     /translation="MFKKLFGKGKEVQKDIAIYAPLTGEYVKIEDIPDPVFAQKMMGE
                     GFGINPTEGEVVSPIAGRVDNVFPTKHAIGLKADNGLELLVHIGLDTVQLDGEGFEVL
                     VSSGDEVNVGDPLVRFNLEYINNNAKSVISPIIITNTDQAASINIYDENAVIKGETKV
                     IDVTMN"
     gene            3820..4041
                     /locus_tag="O6Y56_002240"
     CDS             3820..4041
                     /locus_tag="O6Y56_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YozE family protein"
                     /protein_id="HDB5575483.1"
                     /translation="MKNYSFYQFVMTVRGRHDDKGRLAEEIFDDLAFPKHDDDFNILS
                     DYIETHGDFTLPMSVFDDLYEEYTEWLKF"
     gene            4233..5723
                     /locus_tag="O6Y56_002241"
     CDS             4233..5723
                     /locus_tag="O6Y56_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HDB5575484.1"
                     /translation="MDDKQHKSSSDDERAEIATSNQDQQTNSSKRVHLKRWQFISILI
                     GTILITAVITVVAYIFINQKISGLNKTDQANLNKIENVYKILNSDYFKKQNSDKLSKA
                     AIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQIMVTSPMKGSPA
                     ERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKREK
                     IHVKSVEYKKKGKVGIITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNNPGGLLD
                     EAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALKEAKDMDISILVNEGSASASEVF
                     TGALKDYHKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGKGIKPD
                     VTIDTPKYQSLNVIPNTKTFKVGDDDKNIKTIKIGLSALGYKVDNESTQFDQALENQV
                     KAFQQANKLEVTGEFNKETNNKFTELLVEKANKHDDVLDKLINILK"
     gene            6123..6632
                     /locus_tag="O6Y56_002242"
     CDS             6123..6632
                     /locus_tag="O6Y56_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5575485.1"
                     /translation="MIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEE
                     DIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEYKGAA
                     TELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDKGEPF
                     YAYYKNLKE"
     gene            6644..7714
                     /locus_tag="O6Y56_002243"
     CDS             6644..7714
                     /locus_tag="O6Y56_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDB5575486.1"
                     /translation="MTKIAFTGGGTVGHVSVNLSLIPTALSQGYEALYIGSKNGIERE
                     MIESQLPEIKYYPISSGKLRRYISLENAKDVFKVLKGILDARKVLKKEKPDLLFSKGG
                     FVSVPVVIAAKSLNIPTIIHESDLTPGLANKIALKFAKKIYTTFEETLNYLPKEKADF
                     IGATIREDLKNGNAHNGYQLTGFNENKKVLLVMGGSLGSKKLNSIIRENLDALLQQYQ
                     VIHLTGKGLKDDQVKKSGYIQYEFVKEDLTDLLAITDTVISRAGSNAIYEFLTLRIPM
                     LLVPLGLDQSRGDQIDNANHFADKGYAKAIDEEQLTAQILLQELNEMEQERTRIINNM
                     KSYEQSYTKEALFDKMIKDALN"
     gene            7731..8345
                     /locus_tag="O6Y56_002244"
     CDS             7731..8345
                     /locus_tag="O6Y56_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HDB5575487.1"
                     /translation="MSQWKRISLLIVFTLVFGIIAFFHESRLGKWIDNEVYEFIYSSE
                     SFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPALK
                     NIFDRERPTLLRLIDITGFSFPSGHAMGSTAYFGSGIYLLNRLNQGNSKGILIGLCAA
                     MILLISISRVYLGVHYPTDIIAGIIGGVFCIILSTLLLRNKLIN"
     gene            8461..8660
                     /locus_tag="O6Y56_002245"
                     /pseudo
     CDS             8461..8660
                     /locus_tag="O6Y56_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000184337.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         3278 a         1193 c         1576 g         2747 t
ORIGIN      
        1 acttattaaa atataataat aatatttgga acgaatgggc ttttgaaaat tatatcaaat
       61 cagacgagta taaaggtcca gatatgactg attttgggca tcgtgcattg agtgatcctg
      121 aatttaacga acaatataaa gaacaaatga aacaatttaa gcaacgtatt cttgaagatg
      181 atacatttgc gaagcaattc ggtgatttag gaaatgttta tggtaaacaa tggcgagatt
      241 gggttgataa agatggtaat cattttgatc aacttaaaac agtaattgag caaattaagc
      301 ataatccgga ttcaagacga cacatcgtat ctgcatggaa tccaacagaa attgacacaa
      361 tggcacttcc gccttgtcat accatgttcc agttttatgt ccaagatggt aagttaagtt
      421 gccagttata ccaacgtagc gcagatatct ttttaggtgt gccatttaat atcgcaagct
      481 acgctttatt gacacacctt attgccaaag aatgtggact tgaagtagga gaatttgtgc
      541 atacatttgg agatgcacat atttattcaa atcatattga tgcgattcaa acacaattag
      601 cacgtgaaag cttcaatcct ccaacattaa aaattaacag tgacaagtct attttcgaca
      661 taaattatga agatttggaa attgttgact atgaatcaca tccagcaata aaagctccaa
      721 tagcagttta gtcgttgcat agttagctaa ccatttagac atcaaaatga catcatagta
      781 ttttcaagtg caaaaaagta cttttttgtg ttaaacgttt tcataaatta tgcaaaatca
      841 ttatttctat cacactttat gataaaaatt gtgttaaatt aaagataact tagtaataaa
      901 aaatgaaatg atagaagaag gaggataatt atgactttat ccattctagt tgcacatgac
      961 ttgcaacgag taattggttt tgaaaatcaa ttaccttggc acctaccaaa tgatttgaag
     1021 catgttaaaa aattatcaac aggtcatact ttagtaatgg gtcgaaagac atttgaatcg
     1081 attggtaaac cactaccgaa tcgtcgaaat gttgtactta cttcagatac aagtttcaac
     1141 gtagagggcg ttgatgtaat tcattctatt gaagatattt accaactacc gggccatgtt
     1201 ttcatatttg gagggcaaac attatttgaa gaaatgattg ataaagtgga cgacatgtat
     1261 attactgtta ttgaaggtaa attccgtggt gatacgttct ttccacctta tacatttgaa
     1321 gactgggaag ttgcctcttc agttgaaggt aaactagatg aaaaaaatac aattccacat
     1381 acctttctac atttaattcg taaaaaataa gggggaaaat gaccatgaca aaacagatta
     1441 tagtgacaga ctcaacatcc gatttatcta aagaatattt agaagcaaac aacatacatg
     1501 taatcccttt aagtttaact attgaaggag cttcatacgt tgaccaagta gatattacat
     1561 cagaagaatt tattaatcat attgaaaatg atgaagatgt aaagacaagt caaccagcca
     1621 taggcgaatt tatatctgct tatgaagaac taggaaaaga tggcgctgaa atcataagta
     1681 ttcatctttc ttcaggatta agtggtacat ttaacactgc ttaccaagca agtcaaatgg
     1741 tagatgctaa tgtaactgtt attgattcaa aatctatttc ttttggttta gggtatcaaa
     1801 tacaacacct agtagagctt gtaaaagaag gtgtctcaac ttctgaaata gttaataagt
     1861 taaatcattt aagagaaaac attaaattat ttgtagttat agggcaattg aatcaattaa
     1921 ttaaaggtgg cagaattagt aaaacaaaag gtttaattgg taatcttatg aaaattaaac
     1981 caattggtac actagacgat ggtcgcttag agcttgtgca caatgcgaga actcaaaatt
     2041 ctagtatcca atacttgaaa aaggaaattg ctgaatttat aggagatcat gaaatcaaat
     2101 ccgttggtgt cgcacatgct aacgtcattg aatatgttga taaattgaag aaagttttta
     2161 atgaagcttt tcatgtgaat aattacgata taaatgtaac tacaccagtt atttctgcac
     2221 atactggtca aggtgcgatt ggcctcgtag tccttaagaa gtaaatttaa tcttttcagt
     2281 gttaattact tccatttcaa tcctttatag actaaattta taattagata gatagataga
     2341 ggaggtaatt catatgacaa aagaatatgc aacattagca ggaggatgtt tctggtgcat
     2401 ggttaaacca tttacatcat atccaggcat caagtcagtc gtatctggtt atagtggcgg
     2461 tcatgttgac aatccaactt atgaacaggt atgtacgaat caaaccggcc atgtcgaagc
     2521 agtacaaatt acgtttgatc cagaggttac ttcctttgaa aatatattag acatatattt
     2581 caaaacattt gacccaaccg atgatcaagg gcaatttttc gatagaggcg aaagctatca
     2641 accagtcatt ttctatcatg atgagcatca gaaaaaggct gctgagttta aaaagcaaca
     2701 attaaatgaa caaggtattt tcaagaaacc agtgattaca cctattaaac catataaaaa
     2761 tttctatcca gctgaagact accatcaaga ttattataaa aagaacccgg tacattatta
     2821 ccaatatcaa cgtggttcag gtagaaaagc gtttatagaa tcacattggg ggaatcaaaa
     2881 tgcttaaaaa agataaaagt gaactaacag acatagaata tattgttaca caagaaaatg
     2941 gcactgaacc accatttatg aatgaatatt ggaatcattt tgctaaagga atttatgtag
     3001 ataagatttc tggtaaacct ttatttacat ctgaagaaaa gtttcattct gaatgtggat
     3061 ggcctagctt ttccaaagcg cttgatgacg atgaaattat agaattagtc gacaaatctt
     3121 ttggtatgtt gagaactgaa gtgcgttcag aagaatcaaa tagtcattta ggacatgtct
     3181 ttaatgatgg acctaaagaa agtggtggct taagatactg tatcaattcc gctgcaattc
     3241 aatttattcc atatgaaaaa ttagaagaat tgggttatgg cgatttaata tcacattttg
     3301 ataagtagga gtggaaagta tgtttaaaaa attattcgga aaaggcaaag aagttcagaa
     3361 agatatcgca atttatgcac cattaactgg agaatacgtg aaaattgaag atattccaga
     3421 tcctgtattc gcacaaaaaa tgatgggcga aggttttggt attaatccaa ctgaaggaga
     3481 agttgtgtct ccaatagcag gacgtgttga taatgtcttt ccaactaagc atgcgattgg
     3541 tttgaaagca gataacggat tagaattatt agttcatatc ggtttagaca cagttcaatt
     3601 agacggtgaa ggatttgaag tgttagtgtc tagtggtgac gaagttaacg tcggagatcc
     3661 attagtaaga ttcaaccttg aatatattaa taataatgct aaatctgtta tttcacctat
     3721 tattattact aacacagatc aagcagcttc aattaatatt tatgatgaaa atgctgtgat
     3781 taaaggtgaa acaaaagtga ttgatgtgac aatgaactaa tgaaaaacta ttcgttttat
     3841 caatttgtca tgacagttcg tgggcgacac gacgataaag gtcgtctagc agaagagata
     3901 tttgacgatc ttgctttccc aaaacacgat gatgatttta acatactgtc tgattatatt
     3961 gagacacatg gtgatttcac attgccaatg tctgtatttg atgatttata tgaagaatat
     4021 acggaatggc taaaatttta atataatttt taataataat agttagaacc agggtgatgc
     4081 aatttgttat cctggtttta atttaaaata aactaagttg tgactaaaaa ttaatcaatt
     4141 atagtgaaat atggtgcgct atcttgcata aattgatatg attaactaca cagaatttaa
     4201 aagtacataa tacataataa ggaagtgata caatggatga taagcaacac aaatcttcat
     4261 ccgatgatga acgcgctgaa attgcaacaa gcaatcaaga ccaacaaact aattcatcga
     4321 aacgcgttca tttaaaacgt tggcaattca tatcaatttt aattggtaca atcctaataa
     4381 cggctgtcat cacagttgtt gcatatattt ttataaatca aaaaataagt ggtttaaaca
     4441 aaactgatca agcaaactta aataaaattg aaaatgtgta taaaatctta aatagtgatt
     4501 attttaaaaa acagaactct gacaagttga gtaaagctgc aattgatggc atggtcaaag
     4561 aattaaaaga tccttattct gaatatttaa caaaagaaca aactaaatcc tttaatgaag
     4621 gtgtttcagg tgattttgta ggtattggtg cagaaatgca aaagaaaaat gatcaaatta
     4681 tggttactag ccctatgaag ggttctccag cagaacgtgc tggcatccgt cctaaagatg
     4741 tcattactaa agtaaatgga aaatcaatta aaggtaaagc attagatgaa gttgtcaaag
     4801 atgttcgtgg taaagaaaac actgaagtaa ctttaactgt tcaacgaggc agtgaagaaa
     4861 aagacgttaa gattaaacgt gaaaaaattc atgttaaaag tgttgagtat aagaaaaaag
     4921 gtaaggttgg aattattact attaataaat tccagaatga tacatcaggt gaattgaaag
     4981 atgcagttct taaagctcac aaagatggtt tgaaaaagat tgttttagat ttaagaaata
     5041 acccaggtgg actactagat gaagctgtta aaatggcaaa tatttttatc gataaaggaa
     5101 aaactgttgt taaactagaa aaaggtaaag atactgaagc aattcaaact tctaatgatg
     5161 cgttaaaaga agcgaaagac atggatatat ccatcttagt gaatgaaggt tcagctagcg
     5221 cttctgaagt gtttactggt gcgctaaagg actatcataa agctaaagtt tatgggtcaa
     5281 aaacattcgg caaaggtgtc gtacaaacta caagagagtt taaggatggt tcgttgttaa
     5341 aatatactga aatgaaatgg ttaacgccag atggtcatta tattcacggt aaaggcatta
     5401 aaccagacgt tactattgac acacctaaat atcaatcttt aaatgtcatt cctaatacga
     5461 aaacatttaa agttggagac gatgataaaa atattaaaac tattaaaatt ggattatcag
     5521 ctttaggtta taaagttgat aatgaatcaa cgcaatttga ccaagcttta gaaaatcaag
     5581 ttaaagcttt ccaacaagcg aataaactag aggtaactgg tgaatttaat aaagaaacga
     5641 ataataaatt tactgagtta ttagttgaaa aagctaataa acatgatgat gttctcgata
     5701 aattgattaa tattttaaaa taagcgatac acactactaa aattgtatta atattatgtt
     5761 aatgacacgc ttcctaaatt tgcaaagata gcaatttagg aggcgtgttt atttttattg
     5821 acgtctaact ctaaaagata taaattagac atttacaaat gatgtaaata acgcaatttc
     5881 tatcatcgct gttaacaatt catgctttaa tatactatga gcatatactt tttaaatagt
     5941 attattcact agttttaaca atcaattaat tggcatatga tacttttatt ggttattttc
     6001 atcccatagt gtgataatta ctatttttca ttcataataa aggtttaaag catgttaata
     6061 gtgtgtaaga ttaacatgta ctgaaaaaca tgtttaacat aacgatataa ggagtgacgt
     6121 acatgatccg tctaggtaaa atgtcagatt tagatcaaat cttaaatcta gtagaagaag
     6181 caaaagaatt aatgaaagaa cacgacaacg agcaatggga cgatcagtac cctcttttag
     6241 aacattttga agaagatatt gctaaagatt atttgtatgt attagaggaa aatgacaaaa
     6301 tttatggctt tattgttgtc gaccaagacc aagcagaatg gtatgatgac attgactggc
     6361 cagtaaatag agaaggtgcc tttgttattc atcgattaac tggttcgaaa gaatataaag
     6421 gagctgctac agaattattc aattatgtta ttgatgtagt taaagcacgt ggtgcagaag
     6481 ttattttaac ggacaccttt gcgttaaaca aacctgcaca aggtttattt gccaaatttg
     6541 gatttcataa ggtcggtgaa caattaatgg aatatccgcc atatgataaa ggtgaaccat
     6601 tttatgcata ttataaaaat ttaaaagaat agaggtaata ttaatgacga aaatcgcatt
     6661 taccggaggg ggaacagttg gacacgtatc agtaaattta agtttaattc caactgcatt
     6721 atcacaaggt tatgaagcgc tttatattgg ttctaaaaat ggtattgaaa gagaaatgat
     6781 tgaatcacaa ctaccagaaa ttaagtatta tcctatttcg agtggtaaat taagaagata
     6841 tatttcttta gaaaatgcca aagatgtatt taaagtattg aaaggtattc ttgatgctcg
     6901 taaagttttg aaaaaagaaa aacctgatct attattttca aaaggtggat ttgtatctgt
     6961 gcctgttgtt attgcagcca aatcattaaa tataccaact attattcatg aatctgactt
     7021 aacaccagga ttagcgaata agatagcact taaatttgcc aagaaaatat atacaacatt
     7081 tgaagaaacg ctaaactatc tacccaaaga gaaagctgat tttattggag caacaattcg
     7141 agaagattta aaaaatggta atgcacataa tggttatcaa ttaacaggct ttaatgaaaa
     7201 taaaaaagtt ttactcgtta tgggtggaag cttaggaagt aaaaaattaa atagcattat
     7261 tcgcgaaaac ttagatgcat tattacaaca atatcaagtg atacatttaa ctggtaaagg
     7321 attaaaagat gatcaagtta aaaaatcagg atatatacaa tatgaatttg ttaaagagga
     7381 tttaacagat ttattagcaa ttacggacac agtaataagt agagcaggat caaatgcgat
     7441 ttatgagttc ttaacattac ggataccaat gttattagta ccattaggtt tagatcaatc
     7501 ccgaggcgac caaattgaca atgcaaatca ttttgctgat aaaggttatg ctaaagcgat
     7561 tgatgaagaa caattaacag cacaaatttt attacaagaa ctaaatgaaa tggaacagga
     7621 aagaactcga attatcaata atatgaaatc gtatgaacaa agttatacga aagaagcttt
     7681 atttgataag atgattaaag acgcattgaa ttaatggggg gtaatgcttt atgagtcaat
     7741 ggaaacgtat ctctttgctc atcgttttta cattggtttt tggaattatc gcgtttttcc
     7801 acgaatcaag actagggaaa tggattgata atgaagttta tgaatttata tattcatcag
     7861 agagctttat tacgacatct atcatgcttg gggctactaa agtaggtgaa gtctgggcaa
     7921 tgttatgtat ttcattactt cttgtggcat atctcatgtt aaagcgccac aaaattgaag
     7981 cattattttt tgcattaaca atggcattat ctggaatttt gaatccagca ttaaaaaata
     8041 tattcgatag agaaagacct acattactgc gtttaattga tataacagga tttagctttc
     8101 ctagcggtca tgctatggga tcaactgcat attttggaag tggtatctat ctattaaatc
     8161 gattaaatca aggtaattca aaaggtattc ttatagggtt atgtgcagct atgattttat
     8221 tgatttccat atcacgtgta tatctaggtg tacattatcc aacagatatt attgccggca
     8281 ttattggtgg cgtattttgt attattttat caacgttatt acttagaaat aaattaatca
     8341 attaaatagt aaaaaacaaa agcagtaaac ctaaagtgtc gtaagggttt actgctttta
     8401 taaaacgttg ttataacgta tattgtcttt tacgggcata taaaagggga atatttgaaa
     8461 atgaccaatc caacaagaac gaaacgttgt ggggggatgt tctatgtggt attgataatc
     8521 attttcaact actattatac attagtgaga atcattgtca attagaaact aaaacttttt
     8581 ttgaatattt tttaagaata gtaaataaaa cgcatgatta cgctatttta gaaaataaaa
     8641 aaatttgtat ttctcagtag aattagaata tttaaaagtg atgaagctta aaaattatat
     8701 tgtttacata ttccttttga attcatacat taagaaatgt tacttgcaag ttcaaacagg
     8761 ctgggaaata aatcaatgtt ctatgatcta cgaa
//
LOCUS       DALMNS010000107         8680 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.107, whole genome shotgun sequence.
ACCESSION   DALMNS010000107 DALMNS010000000
VERSION     DALMNS010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8680
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.107"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            4..1521
                     /locus_tag="O6Y56_002246"
     CDS             4..1521
                     /locus_tag="O6Y56_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000082539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDB5575488.1"
                     /translation="MSQKDKKLTGVFGHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQ
                     FDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERG
                     AADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDA
                     QNNWDFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFR
                     TQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDN
                     PFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQG
                     RLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPN
                     NHGKFDSQPEYKKPPFPTDGYGYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTA
                     NAMEGVTDDVKRRHIRHCYKADPEYGKGVAKALGIDINSIDLETENDETYENFEK"
     gene            1612..1761
                     /gene="rpmG"
                     /locus_tag="O6Y56_002247"
     CDS             1612..1761
                     /gene="rpmG"
                     /locus_tag="O6Y56_002247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDB5575489.1"
                     /translation="MRVNVTLACTECGDRNYITTKNKRNNPERIEMKKYCPRLNKYTL
                     HRETK"
     gene            2215..2484
                     /gene="rpsN"
                     /locus_tag="O6Y56_002248"
     CDS             2215..2484
                     /gene="rpsN"
                     /locus_tag="O6Y56_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009384394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HDB5575490.1"
                     /translation="MAKKSKIAKERKREELVNKYYELRKELKAKGDYEALRKLPRDSS
                     PTRLTRRCKVTGRPRGVLRKFEMSRIAFREHAHKGQIPGVKKSSW"
     gene            2641..3618
                     /gene="guaC"
                     /locus_tag="O6Y56_002249"
     CDS             2641..3618
                     /gene="guaC"
                     /locus_tag="O6Y56_002249"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015365036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HDB5575491.1"
                     /translation="MKIFDYEDIQLIPNKCIVESRSECDTTIQFGPKKFKLPVVPANM
                     QTVMNEKLAKWFAENDYFYIMHRFDEEARIPFIKHMQNSGLFASISVGVKKAEFDFIE
                     KLAQEKLIPEYITIDIAHGHSDSVINMIKHIKTHIPDSFVIAGNVGTPEGVRELENAG
                     ADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAARKPLIADGGIRTHGDIAKS
                     IRFGASMVMIGSLFAAHEESPGETVELDGKQYKEYFGSASEFQKGEHKNVEGKKMFVE
                     HKGSLMDTLKEMQQDLQSSISYAGGKDLKSLRTVDYVIVRNSIFNGDRD"
     gene            3640..4656
                     /locus_tag="O6Y56_002250"
     CDS             3640..4656
                     /locus_tag="O6Y56_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001789887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HDB5575492.1"
                     /translation="MKKFIVTVVAFLSIIIIAPITEFKPFIHLQNEVRQYIDIHINKE
                     TISAENKLDTPKKQQFAFNNIQMNMSKSDVEKTLNKPKRVTFNEYGTKWYTYYDDDYN
                     NFIMISYIKDKVNVLYTNQNIITSKSKIKYNTPKSVVRQRLGEPETEIVKGRVRYEQN
                     NKEYDVFHKNHIYTTVFYDKHRRNNVTAVLQVSDAMENRLKEQYGAPSKSLADSFELQ
                     NFDLVNAERKQHQLPTLKYSKQNSETARKHSKDMAENHYFDHTNLKGQSPFDRLKKDG
                     ITFNSAGENLAYGQVSSIYAHQGLMNSIGHRKNILNDTFKILGVGVDFNDEKQPFWTE
                     NYTG"
     gene            complement(5036..5659)
                     /gene="lexA"
                     /locus_tag="O6Y56_002251"
     CDS             complement(5036..5659)
                     /gene="lexA"
                     /locus_tag="O6Y56_002251"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HDB5575493.1"
                     /translation="MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVH
                     GHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINMEETIHVPVIGKVTAGVPITAVEN
                     IEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
                     EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM"
     gene            5802..6035
                     /locus_tag="O6Y56_002252"
     CDS             5802..6035
                     /locus_tag="O6Y56_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575494.1"
                     /translation="MFYNKYKNVSTYIIIFLVSSVAFAIFLLSANVSAHSEQVYEMTD
                     HQIKNNTINKTYEHKDPTNNSEQRDGKVFALIN"
     gene            6171..6410
                     /locus_tag="O6Y56_002253"
     CDS             6171..6410
                     /locus_tag="O6Y56_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF896 domain-containing protein"
                     /protein_id="HDB5575495.1"
                     /translation="MSNSDLNIERINELAKKKKEVGLTQEEAKEQTALRKAYLESFRK
                     GFKQQIENTKVIDPEGNDVTPEKIKEIQQKRDNKN"
     gene            6531..8519
                     /gene="tkt"
                     /locus_tag="O6Y56_002254"
     CDS             6531..8519
                     /gene="tkt"
                     /locus_tag="O6Y56_002254"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001661967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDB5575496.1"
                     /translation="MFNEKDQLAVDTLRALSIDTIEKANSGHPGLPMGAAPMAYTLWT
                     RHLNFNPQSKDYFNRDRFVLSAGHGSALLYSLLHVSGSLELEELKQFRQWGSKTPGHP
                     EYRHTDGVEVTTGPLGQGFAMSVGLALAEDHLAGKFNKEGYNVVDHYTYVLASDGDLM
                     EGISHEAASFAGHNKLSKLVVLYDSNDISLDGELNKAFSENTKARFEAYGWNYLLVKD
                     GNDLEEIDNAITTAKSQEGPTIIEVKTTIGFGSPNKAGTNGVHGAPLGEDERKLTFEN
                     YGLDPEKRFNVSEEVYEIFQNTMLKRANEDESQWNSLLEKYAETYPELAEEFKLAISG
                     KLPKNYKDELPRFELGHNGASRADSGTVIQAISKTVPSFFGGSADLAGSNKSNVNDAT
                     DYSSETPEGKNVWFGVREFAMGAAVNGMAAHGGLHPYGATFFVFSDYLKPALRLSSIM
                     GLNATFIFTHDSIAVGEDGPTHEPIEQLAGLRAIPNMNVIRPADGNETRVAWEVALES
                     ESTPTSLVLTRQNLPVLDVPEDVVEEGVRKGAYTVYGSEETPEFLLLASGSEVNLAVE
                     AAKDLEKQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVG
                     TAGKVIAIDGFGASAPGDLVVEKYGFTKENILNQVMSL"
BASE COUNT         3170 a         1210 c         1599 g         2701 t
ORIGIN      
        1 actatgtcac aaaaagacaa aaagttaact ggtgtttttg ggcatccagt atcagatcga
       61 gaaaatagta tgacagcagg gcctagggga cctcttttaa tgcaagatat ttacttttta
      121 gagcaaatgt ctcaatttga tagagaagta ataccagaac gtcgaatgca tgccaaaggt
      181 tctggtgcat ttgggacatt tactgtaact aaagatataa caaaatatac gaatgctaaa
      241 atattctctg aaataggtaa gcaaaccgaa atgtttgccc gtttttctac tgtagcagga
      301 gaacgtggtg ctgctgatgc ggagcgtgac attcgaggat ttgcgttaaa gttctacact
      361 gaagaaggaa actgggattt agtagggaat aacacaccag tattcttctt tagagatcca
      421 aagttatttg ttagtttaaa tcgtgcggtg aaacgagatc ctagaacaaa tatgagagat
      481 gcacaaaata actgggattt ctggacggga cttccagaag cattgcacca agtaacgatc
      541 ttaatgtcag atagagggat tcctaaagat ttacgtcata tgcatgggtt cggttcacac
      601 acatactcta tgtataatga ttctggtgaa cgtgtttggg ttaaattcca ttttagaact
      661 caacaaggta ttgagaactt aactgatgaa gaagctgctg aaattatagc tacagatcgc
      721 gattcatctc aacgcgattt attcgaagcc attgaaaaag gtgattatcc aaaatggaca
      781 atgtatattc aagtaatgac tgaggaacaa gctaaaaatc ataaagataa tccatttgat
      841 ttaacaaaag tatggtatca cgatgagtat cctctaattg aagttggaga gtttgaatta
      901 aatagaaatc cagataatta ctttatggat gttgaacaag ctgcgtttgc accaactaat
      961 attattccag gattagattt ttctccagac aaaatgctgc aagggcgttt attctcatat
     1021 ggcgatgcgc aaagatatcg attaggagtt aatcattggc agattcctgt aaaccaacct
     1081 aaaggtgttg gtattgaaaa tatttgtcct tttagtagag atggtcaaat gcgcgtagtt
     1141 gacaataacc aaggtggagg aacacattat tatccaaata accatggtaa atttgattct
     1201 caacctgaat ataaaaagcc gccattccca actgatggat acggctatga atataatcaa
     1261 cgtcaagatg atgataatta ttttgaacaa ccaggtaaat tgtttagatt acaatcagag
     1321 gacgctaaag aaagaatttt tacaaataca gcaaatgcaa tggaaggcgt aacggatgat
     1381 gttaaacgac gtcatattcg tcattgttac aaagctgacc cagaatatgg taaaggtgtt
     1441 gcaaaagcat taggtattga tataaattct attgatcttg aaactgaaaa tgatgaaaca
     1501 tacgaaaact ttgaaaaata aatttgatat gtagtttcta tattgcgtag ttgagcagtt
     1561 tatgatatca taataaatcg taaagattcc taacaagaga gggtgtttaa cgtgcgcgta
     1621 aacgtaacat tagcatgcac agaatgtggc gatcgtaact atatcactac taaaaataaa
     1681 cgtaataatc ctgagcgtat tgaaatgaaa aaatattgcc caagattaaa caaatatacg
     1741 ttacatcgtg aaactaagta attcttatca ttcaaatacg acgatttgaa aataaagcgg
     1801 gcttacctat tatattgggg agctcgcttt tttatgaaat ttttgtgaag agtgattaat
     1861 gaattgagtt tcatcgatag aacaatttat gattgtatta gttgttactt tattaaaatt
     1921 tgagaatatt tatagaagga aatagattac tgattttata aagtcatttt gttagcgaat
     1981 gcttgaaaga gtatttaata tagtagaatt taaaatttca aagcggaatt taataagtac
     2041 gaagtaattg tggatatgtt ttataaatgt tcgacaatac attttaatgt taaatatgat
     2101 ggtttagaaa ataatttaac aaagaaatga aactttactg ttgaattatg tgaggattgt
     2161 gttattatat aaatcgtaat aattacgatt tgataaaaag tgaggtaact atatatggct
     2221 aagaaatcta aaatagcaaa agagagaaaa agagaagagt tagtaaataa atattacgaa
     2281 ttacgtaaag agttaaaagc aaaaggtgat tacgaagcgt taagaaaatt accaagagat
     2341 tcatcaccta cacgtttaac tagaagatgt aaagtaactg gaagacctag aggtgtatta
     2401 cgtaaatttg aaatgtctcg tattgcgttt agagaacatg cgcacaaagg acaaattcca
     2461 ggtgttaaaa aatcaagttg gtaaaatcaa atttcgtact ttagcccatt tacaatatca
     2521 ataaaacaat gtacagtata tacgaatgct ataaactgaa tgttttctca tattaataag
     2581 gaaacattcg gtttttaatt tgcatttaaa aataattagt ttttaaaggg gctatttaaa
     2641 gtgaaaatat ttgattacga agatattcaa ttaataccta ataaatgcat agttgaaagt
     2701 aggtctgaat gtgatacaac tatccaattt ggtccgaaaa aattcaagct acctgtagtt
     2761 cctgcaaata tgcaaacagt tatgaatgag aaattagcga aatggtttgc tgaaaatgat
     2821 tacttttata tcatgcatcg ttttgatgaa gaagcaagaa taccttttat aaaacatatg
     2881 caaaattcag gcttatttgc atctatttca gttggtgtaa agaaagcgga atttgatttt
     2941 attgaaaagt tagctcaaga aaaattaatc cccgaatata ttacaataga tattgcgcat
     3001 ggtcactcag attcagtgat aaacatgatt aaacatataa aaacccatat acctgatagt
     3061 tttgttattg ctggtaatgt tggtacgcca gaaggtgtta gagaattaga aaatgctggt
     3121 gctgatgcta ccaaagtcgg tataggtcct ggtagagttt gtattacaaa gattaaaaca
     3181 ggttttggta ctggtggttg gcagttagcg gcattaaaca tatgtagtaa agcagctcgt
     3241 aaacctttga ttgccgatgg tggtataaga acgcatggcg acatcgctaa gtcaattaga
     3301 tttggtgcat caatggtcat gattggttca ttatttgcgg cacacgaaga atcacctggt
     3361 gaaactgtag aacttgatgg taaacagtat aaagaatatt ttggtagtgc atctgaattt
     3421 caaaaaggcg aacataaaaa tgtagaaggt aaaaaaatgt ttgtagaaca taaggggtca
     3481 ttaatggata ccttaaaaga aatgcaacaa gatttacaaa gctcaatttc atatgccggt
     3541 ggaaaagact tgaaatcatt acgtactgta gattatgtta ttgttagaaa ctctattttc
     3601 aacggtgata gagattaata tttatagtag gtgatgtaaa ttaaaaaatt catagtaact
     3661 gttgttgcgt ttttatcaat tattatcatt gcgccaataa cagaatttaa accattcatt
     3721 catttacaaa atgaagtaag acaatatatt gacattcaca tcaataaaga aacaatttct
     3781 gcggaaaata aattggatac gccgaagaaa caacaatttg cctttaacaa tatacaaatg
     3841 aacatgtcga aatcagatgt tgagaaaaca ttaaataaac caaaaagagt gacatttaat
     3901 gaatatggta cgaagtggta tacgtattat gatgacgatt acaataattt tataatgata
     3961 agttacatta aagataaagt taatgtgtta tatacaaatc aaaatatcat cacttcaaaa
     4021 tcaaaaatta aatacaatac accgaaatcg gttgtaaggc aaagattagg cgaaccagaa
     4081 acagagattg ttaaaggtag agtgcgttac gaacaaaata ataaagaata tgatgttttc
     4141 cataaaaatc acatttatac gacggtattt tatgataagc atcgacgtaa taatgtaaca
     4201 gctgttttac aagtaagtga tgctatggaa aatagattaa aagaacaata tggagcacct
     4261 tcgaaatcgc ttgcagatag ttttgaacta caaaattttg atttagttaa tgctgaaaga
     4321 aaacaacatc aattacctac attgaagtat tctaaacaga attctgaaac tgctcgtaag
     4381 catagtaaag atatggccga aaatcattat tttgatcata caaatttaaa aggtcaatca
     4441 ccatttgatc gattgaaaaa agatggtatt acatttaact cagccggaga gaatttagca
     4501 tatggtcaag ttagtagtat ctatgcacat caaggattaa tgaattctat tggtcacaga
     4561 aaaaatattt taaatgatac gtttaaaata ttaggtgttg gtgttgattt taatgatgaa
     4621 aaacaacctt tttggacaga aaattatact ggttaatgtt tttggtatga gtttaaaggg
     4681 taatgtttgt ctgtaaggaa gtagataaac atgatgacaa cagataaacc aaaagatgcg
     4741 gatatacttg aacgcgtcaa agatatactt aataaaaaag aaagaaaaaa ataataatgg
     4801 ctcgctcctg taaattatta cgggggcgag ttttaatttg tgtaacattt tgcaggaatc
     4861 tgtaattcaa aatttatatt aaagaatgag attatctaac aattcgcaat ttctgtttga
     4921 actgaattta gattagaata aataaaacct cttgaaaacg aaactttttc aagaggtcca
     4981 aaatttataa aaatgagggt ttaacaatta cgataatata taacggttta aaatattaca
     5041 tttcgcggta caaaccaatt actttcccaa ttacagcaac attgtcgagg taaattggct
     5101 ccattgtact attttcaggt tgtaatcgat aacgattttt ttctttatag aagcgtttga
     5161 cagttgcttc atcttcctca gtcatagcaa caataatgtc tccattttct gctatggttt
     5221 gactgcgaac aattactttg tctccgtcta atataccagc ctcaatcata ctgtcgccta
     5281 cgacgtttaa tatgaatatg tcgctattat gtgtcgatgt taagtgttca ggtaatggaa
     5341 aatactcttc aatattttct actgcggtaa taggaacacc tgctgtgact ttaccaataa
     5401 ctggcacatg aatcgtttct tccatattaa tattatcatt tgtttgatca cttacaattt
     5461 ctatagcacg tggtttcgtt ggatctcttc ttatatagcc tttttcttca agacgtgaaa
     5521 ggtgaccatg aacagttgaa ctggatgcta agccaactgc ttcaccaatt tcgcgaacac
     5581 taggcggata acctttcatt tgaacaactt gtttaatata gttatatatt tcgctttgtc
     5641 gttttgttaa ttctctcata tataggcact ccctaaatta atttaaatac agtatatcat
     5701 taattcacaa tcaaaacaaa catttgttcg ttaaaatatt gacacagaac ataagttctg
     5761 ataaattact tgtacaaaca aatgttctag gagtgaaaat gatgttttac aataaatata
     5821 aaaacgtatc aacatatatc atcatatttt tagtttcaag tgtagccttt gcaatattct
     5881 tgttaagtgc gaacgttagt gctcactcgg aacaagtgta cgaaatgact gaccatcaaa
     5941 ttaagaacaa tacgataaat aaaacatacg aacataaaga ccctacaaac aatagcgaac
     6001 aaagagatgg gaaagtgttc gctttaataa attgatacat tgtcacaacg ttattttgcc
     6061 tatttttgcg aaatagcgtt ttttattact tttttgctga tcttaaattt gttatatttt
     6121 gttaaagtat tataatgatt gaataaacaa attgaaggta ggttttttaa ttgagtaatt
     6181 ctgatttgaa tatcgaaaga attaacgagt tagctaaaaa gaaaaaagaa gtaggattaa
     6241 ctcaagaaga agcaaaggag caaacagcct taagaaaagc ttatcttgag agttttagaa
     6301 aagggtttaa acaacaaatt gaaaatacta aagtaattga tccagaaggt aatgatgtaa
     6361 cacctgaaaa aattaaagag atacaacaaa aaagagataa taaaaattaa atcacaaatc
     6421 tgtaaagaat tttctgacat tataacttga aataagtatt ttacttatct ttttatttta
     6481 aaataagtta taatgtattt gataaaattg aagaagggaa gatacacaag atgtttaatg
     6541 aaaaagatca attagctgtt gatacgctac gtgcactaag tatcgacaca atcgaaaaag
     6601 cgaattctgg tcatccagga ttacctatgg gagctgcccc aatggcttac actttgtgga
     6661 cacgtcatct gaattttaat ccacaatcta aagattactt caatagagac cgtttcgtat
     6721 tatcggcagg gcatggttca gcattattgt atagcttgtt acatgtttct ggtagtttag
     6781 aattagaaga attaaagcaa tttagacaat ggggttctaa aacaccaggt catcctgaat
     6841 acagacatac tgatggtgta gaagttacta ctggaccact tggacaaggt tttgctatgt
     6901 cagtaggatt agctttagca gaagatcacc tagcagggaa atttaataaa gaaggatata
     6961 atgttgtaga tcattacaca tatgtattag cttctgacgg tgatttaatg gaaggtattt
     7021 cgcatgaagc agcttcattt gctggacata ataaattaag taaattagtt gttttatacg
     7081 attcaaatga tatttcatta gatggcgaat taaacaaagc tttttctgaa aacacaaaag
     7141 ctcgttttga agcatatggt tggaattact tactagttaa agatggtaat gatttagaag
     7201 aaattgataa tgcgattact actgctaaat ctcaagaagg accaacgatt attgaagtta
     7261 aaacaacaat cggatttggt tcaccgaata aagcaggaac taatggtgtt catggggcac
     7321 ctttaggtga agatgaaaga aaattaacat tcgaaaatta tggtttagat cctgaaaaac
     7381 gttttaatgt ttcagaagaa gtatacgaaa ttttccaaaa tactatgtta aaacgtgcta
     7441 atgaagatga atctcaatgg aattcattat tagaaaaata tgcagaaaca tatcctgaat
     7501 tagcagaaga atttaaatta gcgattagtg gtaaattgcc taaaaattat aaggatgaat
     7561 taccacgttt tgaacttggt cataatggtg catctcgtgc tgattctggt actgttattc
     7621 aagcaatcag taaaactgtc ccttcattct ttggtggatc agcagacctt gctggttcaa
     7681 acaaatccaa tgtaaatgat gcaactgatt atagttctga aacacctgaa ggtaaaaatg
     7741 tgtggtttgg tgtacgtgaa tttgctatgg gtgctgctgt aaatggtatg gctgcacatg
     7801 gaggtttaca tccatatggt gcaacattct tcgtatttag tgattattta aaaccagcgt
     7861 tacgcttatc atcaattatg ggattaaatg ctacgttcat cttcacacat gattcaattg
     7921 cagtaggtga agatggtcct actcatgaac caattgaaca attagctgga ctaagagcca
     7981 ttccaaatat gaatgttatc cgtcctgctg atggtaatga aacaagagta gcatgggaag
     8041 ttgccttaga atctgaatct acacctactt cattagtatt gacacgtcaa aacttaccgg
     8101 ttttagatgt accagaagat gtagttgaag aaggcgttcg aaaaggtgcc tatacagttt
     8161 atggctctga agagacacca gaattcctat tattagcttc aggttcagaa gttaatcttg
     8221 cagttgaagc tgctaaagat cttgaaaaac aaggtaaatc agtgcgtgtt gtttcaatgc
     8281 ctaactggaa tgcatttgaa caacaatctg aagaatataa agaatcagtt attccatcaa
     8341 gcgtaacaaa acgtgttgcg attgaaatgg cttcaccgct aggatggcat aaatatgtag
     8401 gtactgcagg taaagttatt gctattgacg gctttggcgc aagtgcacct ggcgatctag
     8461 tagttgaaaa atatggcttt acaaaagaaa atatcttaaa ccaagttatg agcttataag
     8521 aataatttat aaagcgagta tgtttagaag tctaggatgc ataatcttag gcttctttta
     8581 aagtgttgaa atttagagta tagcactcaa actacatcat aagtgataac ttttgaaaat
     8641 atactatttc agattaatct ttaaaacctc tgttataaca
//
LOCUS       DALMNS010000108         8643 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.108, whole genome shotgun sequence.
ACCESSION   DALMNS010000108 DALMNS010000000
VERSION     DALMNS010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8643
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.108"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            56..865
                     /locus_tag="O6Y56_002255"
     CDS             56..865
                     /locus_tag="O6Y56_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDB5575497.1"
                     /translation="MCGLRSITLGTTNIEQTKHFMVDILGLNCEELLENSIRFGDADI
                     SPGTRLQFIQVPSEQLEESHFVGIGLRTPTDSGLEEYAEILSSKEIPFTTTKELNGNK
                     YFSFEDNNGHIFSIYSNENNYGVGLGMPSFESAVNPLHQVQGLGPVILKVNHVDITGQ
                     ILTNIFGLEVFAEYQPFDNADYHVQVFKIGTGGLGGEIHLMPVETEMTMPEYGAVDQV
                     EFETKDADFFNQAKSRLDEVEIPYQTLEQDDIESIRITENSGLSFIFTLQK"
     gene            894..1097
                     /locus_tag="O6Y56_002256"
     CDS             894..1097
                     /locus_tag="O6Y56_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499941.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575498.1"
                     /translation="MLHETWKERTPIKKVEVINTDAKKFTVSDMLTVGKQYDVINETE
                     EYYQIIDNSGLIGGYYKTYFKEV"
     gene            1278..2069
                     /locus_tag="O6Y56_002257"
     CDS             1278..2069
                     /locus_tag="O6Y56_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HDB5575499.1"
                     /translation="MALKHYKNSDSTVFNDAKALFDLNKNILLKGPTGSGKTKLAETL
                     SEVVDTPMHQVNCSVDLDTESLLGFKTIKTNAEGQQEIVFVDGPVIKAMKEGHILYID
                     EINMAKPETLPVLNGVLDYRRQITNPYTGEVIKAVPGFNVIAAINEGYVGTLPMNEAL
                     KNRFVVIHVDYIDGDILKNVIKEQSLLQDDKQIEQIIKFNEDLRTMSKQGQISEEAAS
                     IRALLDLCDLITVMPVERAIKRTIIDKLEDEREQQAIYNAVELNF"
     gene            2083..3969
                     /locus_tag="O6Y56_002258"
     CDS             2083..3969
                     /locus_tag="O6Y56_002258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide reductase activation protein NorD"
                     /protein_id="HDB5575500.1"
                     /translation="MSDRFIKFNDEQLDAKQVMMLQDLARLLLKNEQTQVKIQKFPYY
                     NPVQNVLITSWFWSHRPSHIEMAGLKTDVMLAAYGYHMMDVQIVNEVVQDKTFKHPKF
                     YQQLFKLLEDMRVLNSIKVERPSTAKLIDLRLDTRISYTESQIKVYRTKTQYTDLLFL
                     YLEHAFLSQDFFDIPSIHSDLDDILVNMFLYLPNFFQNQNSEDNMYLAQRIMYQVDDI
                     LKEDMLNEYYYLPKTLYNTLASPEFEDLKRTDASQVDGQDDTSEDDDNQSEKADSKSA
                     DSESKGGAYLEMELHEGQNSETLGNDEAREGDATDDMTDMMTKKGKGSNDTLNREEGD
                     AVGQSQAFQLDGVNKNVEIKWQIPEIEPQYVLEYQESKQDVQYEIKDLIQIIKKTIER
                     EQRDARFNLTKGRLQKDLINWFIDDQYKLFYKKQDLSKSFDATFTLLIDASASMHDKM
                     AETKKGVVLFHETLKALNIKHEILSFSEDAFDSDEHAQPNIINEIINYDYSTFEKDGP
                     RIMALEPQDDNRDGVAIRVASERLMRRNQHQRFLIVFSDGEPSAFNYSQDGIIDTYEA
                     VEMSRKFGIEVFNVFLSQDPITEDVEQTIHNIYGQYAIFVEGVAHLPGHLSPLLKKLL
                     LKSL"
     gene            4194..5537
                     /gene="brnQ"
                     /locus_tag="O6Y56_002259"
     CDS             4194..5537
                     /gene="brnQ"
                     /locus_tag="O6Y56_002259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HDB5575501.1"
                     /translation="MNKNTWVIGFTLFAMFFGAGNLIFPPNLGLDSGQFFWPAILAFV
                     LTGIGLPLLGVIVGALDKEGYIGALNKISPKFSILFLIIIYLTIGPLFAIPRTASTSF
                     EMTITPIIHSNSSIALFIFTIIYFIVVLYICLNPSKLIDRIGSLLTPLLLITILAMII
                     KGYLDFSGNSAGKGNEALYHSNFSSFAEGFTQGYLTMDAIAAIAFSMIVVNAVKLTGI
                     TKTNQIFKQTLTAGLIAAVALIFIYISLGYIGNHMPVSDMTLDQLKSKDRNIGTYLLT
                     TMASTGFGSFGKYLLGIIVALACLTTACGLIVAVSEYFHRIVPKVSYKAFVLVFILMS
                     FIIANQGLNAVISMSIPVLSIVYPVAITVVLLILIAKFIPTKRISQQIPVIIVFILSI
                     FSVISKLGWLKINFIESLPLRAYSLEWFPVAIIATILGYLVGIFVKQDPIKYQQE"
     gene            complement(5611..6747)
                     /locus_tag="O6Y56_002260"
     CDS             complement(5611..6747)
                     /locus_tag="O6Y56_002260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic anion resistance protein"
                     /protein_id="HDB5575502.1"
                     /translation="MTENKSFKESHPLDDFISDKELSNTTIQKEKLTIEQQKQVDTIS
                     KQINPLDNEGLLAFGSGLQKQMSQFSHQMLDEVQSKDVGPIGDTLSDLMSKLKSVNPN
                     ELNTDKPSMLKRIFSRAKSSINEIFSRMQSVSAQVDRITIQLQKHQTHLTRDIELLDT
                     LYDKNKQYFDDLSLHIIAAQQKKLQLENEKLPQLQQQAQQSTNQMDIQQVADMQQFID
                     RLDKRIYDLQLSRQIALQTAPQIRMIQNVNQALAEKIQSSILTSIPLWKNQMAIALTL
                     MRQRNAVAAQRAVTDTTNDLLTANAEMLKQNAIETATENERGIVDLDTLKRTQRNIIE
                     TIEETLIIQQHGREERQLAEKELQQLEQDLKSHLVNIKGPNKQS"
     gene            complement(6779..7408)
                     /locus_tag="O6Y56_002261"
     CDS             complement(6779..7408)
                     /locus_tag="O6Y56_002261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-bromo-4-chloroindolyl phosphate hydrolysis
                     family protein"
                     /protein_id="HDB5575503.1"
                     /translation="MTVRYNISHIFGVLVGIPVAFLTSIFGMIALDVSFLIDMSIGIV
                     GFLMTYLPIQKLTSRKYLNEIGLTRKDYRYIRNQLNHTHQKLRGILKTYVNIRSIKDF
                     RQINDIYQISRSIYTTVRQRPASFYKVEGFFYSHIDNALNLVDAYTRLAKMPKKSINE
                     QQKLEQTRITLDEVKRTLIADLKRLNEDDYERLDIEMELNKLHQKHHQD"
     gene            complement(7427..7696)
                     /locus_tag="O6Y56_002262"
     CDS             complement(7427..7696)
                     /locus_tag="O6Y56_002262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HDB5575504.1"
                     /translation="MRHIHLQVFGRVQGVGFRYFTQRIAMNYNIVGTVQNVDDYVEIY
                     AQGDDADIERFIQGVIEGASPASNVTSHQLEELELNQKLSDFRSI"
     gene            7855..8163
                     /locus_tag="O6Y56_002263"
     CDS             7855..8163
                     /locus_tag="O6Y56_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1033 family protein"
                     /protein_id="HDB5575505.1"
                     /translation="MWTVTKIRADYEGWWLFSDWPENIVEKYQYQDFDDMFKHYQQLI
                     NQCKVQFDNYVTGKYNIYAFYNNCDMNYCEDCEEDLQIFYSFIVLQNNEVYYKLPIID
                     "
     gene            8334..8534
                     /gene="cspA"
                     /locus_tag="O6Y56_002264"
     CDS             8334..8534
                     /gene="cspA"
                     /locus_tag="O6Y56_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock protein CspA"
                     /protein_id="HDB5575506.1"
                     /translation="MKQGTVKWFNAEKGFGFIEVEGENDVFVHFSAINQDGYKSLEEG
                     QAVEFEVVEGDRGPQAANVVKL"
BASE COUNT         2951 a         1243 c         1469 g         2980 t
ORIGIN      
        1 tatgattaaa ataagttata atataatagt aaagataaag atagaggtgg ctataatgtg
       61 tggacttaga agtataacat taggtacaac aaatatagaa cagacaaaac atttcatggt
      121 tgacatatta ggattaaatt gtgaagaact tcttgaaaac tcaattcgtt tcggcgatgc
      181 agatataagc ccaggaacaa gacttcaatt tatacaagtt ccaagtgagc aattagaaga
      241 atctcacttt gttggtattg gattacgtac accaactgac tcaggtttag aggagtatgc
      301 ggaaatatta tcgagtaaag aaattccatt tacaacaact aaagagctaa atggtaataa
      361 atattttagt tttgaagata ataacggtca tattttctca atttactcaa atgagaataa
      421 ttatggcgtc ggtttaggaa tgccttcttt cgaaagtgct gtcaatccgt tacatcaagt
      481 gcaaggttta ggaccagtga ttcttaaagt gaatcatgta gatattacag gtcaaatttt
      541 aacaaatata ttcggacttg aagtatttgc agaataccaa cccttcgaca atgctgacta
      601 tcatgtacaa gtattcaaaa ttggaacggg tggtctaggt ggcgaaatac atttaatgcc
      661 tgtagaaacc gaaatgacaa tgcctgaata tggtgcagtc gatcaagttg agtttgaaac
      721 gaaagatgca gatttcttta atcaagcgaa atcgcgctta gatgaagtgg aaataccata
      781 tcaaacgctt gagcaagatg atattgaatc aattagaatt actgaaaaca gtggattatc
      841 gtttatattc actttacaaa aataattttt ttacgatagt gaggacaaaa tttatgttac
      901 atgaaacttg gaaagaacgt acaccaatca agaaagtaga agtcattaat acagatgcaa
      961 agaaatttac agtttctgac atgttaactg taggcaaaca atatgatgtt atcaacgaaa
     1021 ctgaagaata ttatcaaata atagataatt caggattaat tggcggttac tataaaacat
     1081 atttcaaaga agtttaaacg cataattatt gaaatgaagc ctaatatgag attttcaatt
     1141 agtaaatttg gtaaaatata aacaattcgc atactaagca ttgcgtttta tatcagaata
     1201 gaatagtaaa ctaaggcatt tggagaactt attccatgtc ttagtttttt aatttattta
     1261 aaggagaacg ttttaaaatg gcactaaaac attataagaa ttcagattca acagttttca
     1321 atgatgcgaa ggcattattc gatttaaata aaaatatttt acttaaaggt ccaacaggtt
     1381 cagggaaaac gaagttggca gaaacattaa gtgaagttgt tgatacaccc atgcatcaag
     1441 tcaactgttc tgttgattta gatacagaaa gcttattagg ctttaaaaca attaaaacaa
     1501 atgcggaagg acaacaagaa attgtctttg tagatggtcc agttattaaa gctatgaaag
     1561 aggggcatat tttatatatt gatgaaataa atatggctaa acctgaaaca ttgcctgtat
     1621 taaatggggt cttagattat cgtcgtcaaa ttacgaatcc atacactggt gaagtaatca
     1681 aagctgtacc aggatttaac gttatagcag cgataaatga aggttatgtt ggtacattgc
     1741 caatgaatga agcactaaaa aatcgctttg ttgttattca cgttgactat attgatgggg
     1801 acattttaaa aaatgtgatt aaagagcaaa gtttattaca agatgataaa caaatcgaac
     1861 aaattataaa gtttaacgaa gatttacgta ctatgtctaa gcagggacaa atttctgaag
     1921 aagccgctag tatccgtgca ttattagact tgtgtgattt aatcactgta atgccagttg
     1981 aacgtgcaat taaacgtaca attattgata aattggaaga tgaacgtgaa caacaagcaa
     2041 tatataatgc tgtagaacta aacttttaaa gagggataaa acatgagtga tcgtttcata
     2101 aaatttaacg acgaacagtt agatgccaag caagtaatga tgttgcaaga cttagctcga
     2161 ctcttattaa aaaatgaaca aacacaagtt aaaatccaaa aattccctta ctataatcct
     2221 gttcaaaatg ttttgattac gagttggttt tggtcacatc gaccaagcca tatcgaaatg
     2281 gctggtttaa aaacagatgt tatgttagct gcttacggtt atcatatgat ggatgtacaa
     2341 attgtaaatg aagtagtaca agataaaact tttaaacacc ctaaatttta tcaacaactt
     2401 tttaaattat tagaagatat gcgcgtatta aattctatta aagttgagcg cccaagtact
     2461 gctaaattaa ttgatcttcg cttagataca cggatatcat atacggaatc tcaaattaaa
     2521 gtgtatcgta ctaaaacaca atatacagat ttattatttt tgtatttaga acatgcattt
     2581 ttaagtcaag atttctttga tataccatct atacattcag atttagatga tattttagtt
     2641 aatatgttct tatatttacc taattttttc caaaatcaaa attctgaaga taatatgtat
     2701 ctggctcaaa gaattatgta tcaagtagat gatattttaa aagaagatat gctaaacgaa
     2761 tattattact tacctaaaac actatataat acattagcta gtccagagtt tgaagattta
     2821 aagagaactg atgcaagtca agtcgatggg caagatgata cttcagaaga tgatgataac
     2881 caaagtgaaa aagctgactc taaatctgca gatagtgaat caaaaggtgg cgcttattta
     2941 gaaatggagc ttcacgaagg acaaaatagt gaaacattgg gtaatgatga agcacgtgaa
     3001 ggcgatgcta cagacgatat gactgatatg atgaccaaaa agggcaaagg atcaaacgat
     3061 acgctaaatc gtgaagaagg cgatgctgtt ggtcaaagcc aggcatttca acttgatggt
     3121 gtgaacaaaa atgtagaaat aaaatggcaa attcctgaaa ttgagccaca atatgtttta
     3181 gaatatcaag aatcgaaaca agacgtacaa tatgaaatca aagacttaat tcaaattata
     3241 aagaaaacga ttgaacgaga acaacgagat gcacgtttta atttaacaaa agggcgatta
     3301 caaaaggatt taattaattg gtttatcgac gatcagtata aattgtttta caaaaaacaa
     3361 gatttaagta aatcatttga tgcgacgttt acattgttaa ttgatgcgtc agcaagtatg
     3421 catgataaaa tggctgaaac gaagaaaggt gtagtgttat tccacgagac gttaaaagca
     3481 ttgaacatta aacatgaaat tttatcattc agtgaggatg cctttgattc agacgagcat
     3541 gcacaaccaa atatcattaa tgagattatt aactatgatt actcaacctt tgaaaaagat
     3601 ggcccacgta ttatggcact tgaacctcaa gatgataatc gtgatggtgt tgctattaga
     3661 gttgcaagtg aacgattaat gcgtcgaaat caacatcaac gatttttaat cgtattttca
     3721 gacggcgaac cgtctgcatt taattatagt caagatggta ttattgatac gtatgaagct
     3781 gtagaaatgt cgcgtaaatt tggcattgaa gtatttaatg tatttttgag tcaagatcca
     3841 ataactgaag atgttgaaca aacaattcat aatatttatg gtcaatatgc tattttcgtt
     3901 gaaggtgttg cgcatttacc tggacatctc tctccattat taaaaaaatt actacttaaa
     3961 tctttataaa taaatttaaa atatgagttt atatgaaatt gtgaataaaa gtcatcagtt
     4021 actatttaaa aagtaaattt gaagaatttt attttctgtc ataatttgat ttaaacaaca
     4081 catgtgtttt gtttctgcta tgtacaacat atttcatata gactctttat tattttttgt
     4141 gctaaaatat ttacttgtaa attatttcgt gttttaaaaa aaggagtaac tctatgaata
     4201 aaaatacatg ggtcattggg tttacgctct tcgctatgtt ttttggcgca ggcaatctaa
     4261 tttttcctcc taatctcgga ttggatagtg gtcaattttt ctggcccgcc attttagcgt
     4321 ttgttctaac tgggattggt ttaccattat taggtgtgat tgtaggtgca cttgataaag
     4381 aaggatatat tggcgcatta aataaaattt cacctaaatt ttcaatattg ttcttaatca
     4441 tcatttattt gactataggg ccacttttcg caatacctag aactgcatct acatcttttg
     4501 aaatgacaat tacaccaatt atacatagca atagtagtat cgctttattt atatttacga
     4561 ttatctactt catagtcgtt ttgtatattt gtttaaatcc atctaagtta atcgatcgta
     4621 ttggttcatt attaacacca ttattattga ttactatttt agcgatgatt attaagggat
     4681 acttagattt tagcggtaat agtgctggaa agggcaatga agcactatat cattctaatt
     4741 tttcaagttt tgctgaaggc tttacacaag gctatttaac aatggatgcc attgcagcaa
     4801 ttgcattttc aatgattgtt gttaatgcag taaaactaac aggtattact aaaacaaatc
     4861 aaatattcaa acaaactttg actgctggtt taattgcagc ggttgcttta attttcatat
     4921 atatttcatt aggttatatt ggtaatcata tgccagtaag tgacatgacg ttagatcaat
     4981 tgaaatccaa agatcgaaac attgggacat atttattaac gacaatggct tcaacaggat
     5041 ttggttcatt cggaaaatat ttattgggca tcattgtggc gttggcatgt ctaactacag
     5101 catgcggact tattgttgca gtttctgaat atttccatag aatcgtacct aaagtatcat
     5161 acaaagcatt tgtattagtt ttcattttaa tgagttttat tattgctaac caaggtttaa
     5221 atgctgttat ctcaatgtca attccggtat taagcattgt atacccagta gcaataactg
     5281 ttgtgttatt aattttaatt gccaaattca taccgacaaa acgcatttca caacaaattc
     5341 cagttattat cgtatttata ttgtcgattt tcagtgttat tagtaagtta ggttggctga
     5401 aaattaactt tatagaatca ttgcctctaa gagcgtattc tttagagtgg ttcccagtag
     5461 caattattgc aacgatatta ggctatctag tcggcatatt tgtaaaacaa gatccaatta
     5521 aatatcaaca ggaataacga ataatataaa aggaagcatc tccaatttaa tcttaggatg
     5581 cttccttttt tgttatatct aattcgtaat ttatgattgt ttattcggtc ctttgatgtt
     5641 cactaaatgt gactttaaat cttgttctaa ttgttgtaat tctttttcag ctaattgtcg
     5701 ttcttcgcga ccgtgttgtt gaataattaa tgtttcttca attgtttcaa taatgttacg
     5761 ctgtgtacgt ttcaatgtat caaggtcaac aatgccacgc tcattttctg ttgcagtttc
     5821 aatcgcattt tgtttcaaca tttcagcatt tgctgttaat aaatcattag ttgtatcagt
     5881 gacagctcgc tgtgcagcaa ctgcattacg ttgtctcatt aatgtaagcg caatggccat
     5941 ttgatttttc catagtggaa tacttgtcaa aattgaactt tgtatcttct cggcaagggc
     6001 ttgattaaca ttttgaatca tacgaatttg tggcgcagtt tgcaacgcta tttgtcttga
     6061 aagctgtaag tcatatatgc gtttatctag tctatctata aattgctgca tatctgcaac
     6121 ttgttgaata tccatttgat tagtggattg ctgcgcttgc tgttgcaatt gtggtagctt
     6181 ttcattttct aattgcaact ttttttgctg tgcagcaatg atatgcaatg ataagtcatc
     6241 aaagtattgt ttgtttttat catatagcgt atctaataat tcaatatctc ttgttaaatg
     6301 tgtttgatgt ttctgcagtt gaatcgttat gcgatcgact tgagcactaa ctgattgcat
     6361 tcttgaaaag atttcattga tagacgactt tgctctgcta aaaattcttt ttaacataga
     6421 tggtttatca gtatttaact catttggatt aactgacttt agttttgaca tgagatctga
     6481 caaagtatct ccaataggac caacatcttt actttgtact tcatccaaca tttgatgtga
     6541 aaattgagac atttgtttct gtaaaccaga accaaacgct aataaacctt cattgtctaa
     6601 agggttaatt tgtttactga ttgtgtctac ctgtttttgt tgttcaattg ttaacttttc
     6661 tttttgaata gtagtattcg ataattcttt atcgcttata aaatcatcta gtggatggct
     6721 ttctttgaaa cttttatttt cagtcatcaa tcatctctcc aatagttgct attttacatc
     6781 aatcttgatg atgcttttga tgtaacttat ttaattccat ttcaatatct aaacgttcat
     6841 aatcatcttc gttgagacgc tttaaatcag cgattaatgt tcgtttgacc tcatccaaag
     6901 taattcgtgt ttgttctaat ttttgctgtt cattaattga ttttttgggc atttttgcta
     6961 gacgtgtata tgcatcaacc aaatttaatg cattatcaat atgagaataa aaaaagcctt
     7021 caactttata aaatgatgca ggtctctgtc taactgtcgt ataaatagaa cgtgaaattt
     7081 gatatatatc attaatctgc ctaaaatctt taattgatct tatattgaca tacgttttta
     7141 aaatacctct aagtttttga tgtgtatgat ttaactgatt tcgaatatag cgatagtctt
     7201 ttctagtcaa accaatttcg tttaaatatt tgcgtgaagt gagtttttgt atcggtaggt
     7261 atgtcattaa aaagccaaca ataccaatag acatatcaat taaaaaagat acatcaagtg
     7321 caatcatccc aaatatgctt gttaaaaacg ctacaggaat tcccactaac accccaaata
     7381 tatgagaaat attatatctc actgtcatct tcctttattt agcattttat attgatcgaa
     7441 aatccgataa tttttgattt agttctaact cttcaagttg atggctcgtt acatttgatg
     7501 ctggtgaggc accttcaatt acaccttgaa taaatctctc tatatctgcg tcatcccctt
     7561 gtgcatatat ctctacatag tcatctacat tttgaacagt accgacaatg ttatagttca
     7621 ttgcaatgcg ttgtgtaaaa tatctaaatc cgacgccttg aacgcgtccg aatacttgta
     7681 aatgtatatg tctcattttt accacctcat aatattatta tacgtagttt tacttaaaaa
     7741 aactaataat tactatagtt aatactttgt ttcaagtcgt caaacttgat tttcagagga
     7801 taaaggtata aaaataagta tagagttttt gaagtatgga aggggtcttt aataatgtgg
     7861 acagttacca aaattagagc cgattatgag ggatggtggt tattcagtga ctggccagaa
     7921 aacattgttg aaaaatatca atatcaagat tttgatgaca tgtttaagca ctatcaacaa
     7981 ttgattaatc aatgtaaagt tcagttcgat aattatgtca caggcaaata taatatttat
     8041 gcattttata ataattgtga catgaactat tgcgaagatt gtgaagagga tttacaaata
     8101 ttttatagtt tcattgtttt acaaaataat gaagtatatt ataaactacc aataattgat
     8161 taaatgaata ttttttatta ttgtattgca atttggtaat aactgcacta taatacaagt
     8221 taagcagatg attattccat attgcaaaga atatttgagt gaaatttgca tgtatttttt
     8281 gtaatatgcg aataagcata ttgaatgaat tttagtcttg gaggtttcag attatgaaac
     8341 aaggtacagt taaatggttt aacgctgaaa aaggattcgg ctttatcgaa gttgaaggag
     8401 aaaatgacgt attcgtacat ttttcagcaa ttaaccaaga tggttacaaa tcattagaag
     8461 aaggtcaagc tgttgagttt gaagtagttg aaggcgaccg cggtccacaa gctgcaaacg
     8521 ttgttaaact ataattctta gatttgaatc attgatttta actaacacct taccaagaag
     8581 taaggtgttt ttatatgctt attacaaata cttaacgcga tgagtttctc aaccaaattg
     8641 aga
//
LOCUS       DALMNS010000109         8486 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.109, whole genome shotgun sequence.
ACCESSION   DALMNS010000109 DALMNS010000000
VERSION     DALMNS010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8486
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.109"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(138..1799)
                     /locus_tag="O6Y56_002265"
     CDS             complement(138..1799)
                     /locus_tag="O6Y56_002265"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDB5575507.1"
                     /translation="MNIIDQVKQTLVEEIAASINKAGLADEIPDIKIEVPKDTKNGDY
                     ATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAII
                     PEAIEKGGQFGYVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYN
                     VTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKHP
                     EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLYEKGEILEVLAK
                     MKELGYTYEADGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILI
                     DLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLR
                     EIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAK
                     EQGIEVAATNDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFH
                     KFYNAEKVLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM"
     gene            complement(1796..2212)
                     /locus_tag="O6Y56_002266"
     CDS             complement(1796..2212)
                     /locus_tag="O6Y56_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000359087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1934 domain-containing protein"
                     /protein_id="HDB5575508.1"
                     /translation="MDKKVNIHTKQVLKQHNEKEKFEFTTEGTWQQRQSNFIRYVEQI
                     EDATVNVTIKVDDDSVKLIRKGDINMNLHFVEGQTTTTFYDISAGRIPLEVKTLRILH
                     FVSGDGGKLKIHYELYQDNEKMGSYQYEINYKEIGE"
     gene            complement(2487..3497)
                     /gene="adhP"
                     /locus_tag="O6Y56_002267"
     CDS             complement(2487..3497)
                     /gene="adhP"
                     /locus_tag="O6Y56_002267"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HDB5575509.1"
                     /translation="MRAAVVTKDHKVSIEDKKLRALKPGEALVQTEYCGVCHTDLHVK
                     NADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETL
                     CRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVK
                     PGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDP
                     VAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVL
                     DGIEVVGSLVGTRQDLREAFEFAAENKVTPKVQLRKLEEINDIFEEMENGTITGRMVI
                     KF"
     gene            complement(3996..4517)
                     /locus_tag="O6Y56_002268"
     CDS             complement(3996..4517)
                     /locus_tag="O6Y56_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwhD family protein"
                     /protein_id="HDB5575510.1"
                     /translation="MEVISLSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFID
                     VANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAG
                     LTACYLLVNKAIRRGYKSMPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGM
                     WKHSSDALHQAFN"
     gene            complement(4545..5840)
                     /locus_tag="O6Y56_002269"
     CDS             complement(4545..5840)
                     /locus_tag="O6Y56_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDB5575511.1"
                     /translation="MTNAYVDLKLVEEKVFKDPIHRYIHVEDQLIWDLIKTKEFQRLR
                     RIRQLGTLYLSFHTAEHSRFGHSLGVYEIVRRLIDESFIGHDAWDNKDRPLALCAALL
                     HDLGHGPFSHSFEKIFNTDHEAYTQAIITGDTEVNAVLRKVSPEFPREVAEVINKTHH
                     NKLVISMISSQIDADRMDYLQRDAYFTGVSYGAFDMERILRLMRPSKDEVLIKESGMH
                     AVENFIMSRYQMYWQIYFHPVSRGGEVLLNNCLKRAKQLYNEGYEFKLHPHDFIPFFE
                     ETVTIEQYVELDEAVVTYYLEKWTKEDDAILSDLASRFINRDLFKYIPFDGSIITISE
                     LQELFEAGGINPDYYFVSEAFSDLPYDYDRPGSNRKPIHLLRQDGTIREISNQSLVIH
                     SITGINRQDYKLYYPREMVAKIKDKTIREAIENLINELN"
     gene            complement(5880..6356)
                     /locus_tag="O6Y56_002270"
     CDS             complement(5880..6356)
                     /locus_tag="O6Y56_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5575512.1"
                     /translation="MFKVRQATEKDVVQIRDVATKAWFNTYLNIYAATTVNHLLEASY
                     NEHHLKKRLQEQLFLVVEEGNDIVGFANFIYGEELYLSAHYVKPESQHTGYGTALLNE
                     GLSRFEDKFEGVYLEVDNKNEEAVAYYKEQGFTILRSYEPEMYGEKLDLALMYKAF"
     gene            complement(6526..7062)
                     /locus_tag="O6Y56_002271"
     CDS             complement(6526..7062)
                     /locus_tag="O6Y56_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HDB5575513.1"
                     /translation="MITVLFGGSRPNGNTAQLTKFALQDLEYQWIDVTQHQFKPIRDV
                     RHTTETITSYDDDYLPILDKILASDTIIFASPVYWYSISAPLKAFIEHWSETLQDKRY
                     PNFKAQMAEKDFRVILVGGDCPKIKAKPAITQMKYSLDFLGATLNGYIIGTAEKPGDI
                     MKDNYALARATEWNSILQ"
     gene            complement(7272..8210)
                     /locus_tag="O6Y56_002272"
     CDS             complement(7272..8210)
                     /locus_tag="O6Y56_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDB5575514.1"
                     /translation="MKQFVNLGKSDVEVFPIALGTNAVGGHNLYPNLDEEQGKDVVRQ
                     AINHGINLLDTAYIYGPERSEELVGEVVKEYPREQIKIATKGSHEFDENQEVHQNNQP
                     EYLKQQVENSLKRLQTDYIDLYYIHFPDDNTPKDQAVAALQELKEQGKIKAIGVSNFT
                     LDQLKEANKDGYVDVVQLEYNLLHRENEAVLQYCVDHQITFIPYFPLASGILAGKYDE
                     NTKFSDHRTTRRDFKPGVFEENVRRVKALESLAAAHQTSIANIVLAFYLTRPAIDVII
                     PGAKRAEQVIENIKAADIVLSDDEIQYIDELFPIED"
BASE COUNT         2680 a         1655 c         1098 g         3053 t
ORIGIN      
        1 tgcgcaagca agccaactgt attcctttaa ccttattcac atactaagca ttcccaatat
       61 gtcacatacc taataaaaaa cactccaaca caaagtatct ttcgagaaac tctacgttgg
      121 agtgtatata aatgttctta cattgattca ggtgcgctta caccgaccat tgccaatgca
      181 tttttcaatg taattctgac cgcttcaatc atagcaacat gtgcttttgt tttttcaata
      241 tcatctgtta acactttttc agcattatag aatttatgga aatgagaagc taaatcttga
      301 atataattag taattctatg tgctgatcta tgctcagcag cactttcaat tgtaggttcg
      361 aaatcagcta cttttttcaa caattcaatc gctttttcat ttgtaatcgt tgtaaaatca
      421 ttcgtagcag ctacctcaat tccttgctct ttcgcttgtt ttaaaattga acaaatacgc
      481 gcatgtgcat attgagcata gtaaactgga ttgtcttgag attgctcttt cgctaattcc
      541 atatcaaaat caaagtgact atcaggacta cgcatagtta agaaataacg tgcagcgtca
      601 acgccaactt catccataat ttctcttaat gtaatcgcat taccagtacg tttactcatc
      661 ttcacttctt taccattttc cattaaacga accatttgca tgatttgaat ttctaaacga
      721 ttactatcta caccaaacgt ttcaagagat gctttcaaac gattaatata accatgatga
      781 tcagcaccaa ataaatcgat taaaatgtca ttaccacgtt taactttatc gaagtggtac
      841 gcaatatctg gtaagaaata cgtatatgta ccgtcatttt taattaatac tctgtctttg
      901 tcgtctttaa aatcagttgt acgtaaccat gtagcgccat cagcttcata cgtataacct
      961 aattctttca tttttgctaa aacttcaaga atttcacctt tttcatataa agatgtttca
     1021 ctaaaccaat tatcaaaatg cgtattgaac tctgctaaat catttttcag tttagccatt
     1081 tcgtattcta cgcctaattt tctaaattct ttcaaacgtg cttcttcaga ataatcttta
     1141 atttcagggt gtttctctgc taaatctttg cctatttcaa taatatcttt gccattatag
     1201 ccatcttctg gcattgaata actattgtca cctaaagctt caaagaaacg tgtttcaatc
     1261 gaacgcgcta agttagtaat ttgattacca gcatcattaa tataatattc acgtgttaca
     1321 ttatagccag ctgcagttaa aatattagct aaagcatcac caactgctgc atttctagca
     1381 tgaccaatat gtaaatctcc tgtagggtta gctgaaacat actcaagcaa tacattttga
     1441 ccttttgatt catttacata tccaaattga ccaccttttt caattgcttc aggaataatt
     1501 gctgttaaat actgattatc taagtaaaaa ttaatgaatc ctggaccagc aatgtcaatt
     1561 tgttttacat gtgctttttc agtgtctaag ttatcaacaa tcgcttgagc aatttcacga
     1621 ggattacgct ttgcaatctt agtcagtacc atcgcaatat tagtagcata atctccattt
     1681 tttgtatctt taggaacttc aattttaata tcaggaatct catctgctaa tcctgctttg
     1741 ttaatacttg ctgcaatttc ttctactaat gtttgtttca cttgatcaat aatattcatt
     1801 cgcctatctc cttatagtta atttcatatt gataagaacc cattttttca ttatcttgat
     1861 ataattcata atgaatcttt aacttgccac cgtctccact tacgaaatgt aaaatgcgta
     1921 atgttttaac ttctagtgga attcgtccag ccgatatatc gtaaaaagtt gttgtcgttt
     1981 gtccttcaac aaaatgcaaa ttcatattaa tgtcgccttt acgaatcaac ttaacgctat
     2041 catcatccac ttttattgta acattaactg ttgcatcctc aatttgttct acataccgaa
     2101 taaagttaga ttgcctttgt tgccaagttc cttcagtagt aaattcaaat ttttcttttt
     2161 cgttgtgctg tttcaacact tgctttgtat gaatatttac ttttttatcc aatttactac
     2221 tcaccttaat cttcgcataa tagaaatatt atagcataaa ataaggtcat cttgttatgc
     2281 cttcttaaag ctaaataggt tcatttaatt aacaattcca tacttaatca atacttcata
     2341 tatttaagcc attttataaa atacaaacaa cacctcaaaa ccaaaaaaca cgagattttc
     2401 accatcttac atgaaaacct cgtgtttgat tataatgata gtgtttagag cactaccttc
     2461 tttatctata tagtcagttg atatttttaa aatttaataa ccattctacc agttatagta
     2521 ccattttcca tttcttcaaa aatatcattg atttcttcta attttcttaa ttgaacttta
     2581 ggtgttactt tattttcagc agcaaattca aacgcttcac gtaagtcttg tcttgtacca
     2641 acaagtgaac ctactacttc aataccatca agcactaatc ttgggatatc taagttcatt
     2701 ttatcaacag gtaaaccaac agcaacaact cttgcaccag cttttacaac atcaaccgct
     2761 tggttaaatg gcgtcttagc aactgaagtt accactgttg catctaatcc tttgttatca
     2821 gttaatttca taacttctgc aactggatca acatctttag aattaataat agcatctgca
     2881 cctaattctt tcgcgaatgc taatttatca tcattaatat cgaaggcaac aattttagcc
     2941 cccataacgt ttttagcata ttgtaaagct aggtttccta aaccacctat accaaaaaca
     3001 cctaaccatt gtccaggttt tacattactt acttttacag ctttataagt tgtcacacct
     3061 gcgcatgtaa tagaagacgc tgctgctgga tctaattttt caggtacttt cacagcatag
     3121 tctgcagtaa caataacttg ttcagccatt gcaccatcta ctgtataacc agcatttttc
     3181 acactacggc aaagtgtttc acgacctgtt gtacaatatt cacatcttcc acagctttcg
     3241 aacatccaag cgatagacac acggtctcca atttttaatg attctacatc ttctgcaact
     3301 tcgatgactt taccaatacc ttcatgacct aaagtaacgc ctgtaacatc accaaaatca
     3361 gcattcttaa catgtaaatc ggtatgacaa acaccacaat attccgtttg taccaatgct
     3421 tcaccaggtt ttaaagctct taactttttg tcctcaatac ttactttgtg atctttcgtt
     3481 acaactgctg ctctcataat aatgtcctcc ttatagtcac tccagtatgt atgatattaa
     3541 ttggcgatta ctttcaaaaa tgaaaacgaa taattataga tgtaattttt atttgtaata
     3601 gacgccagat taaaatatac tactgtgact ttgtttttag ttagatatca accgttaact
     3661 tttaacgttt ccctagttaa tatgttaaaa gaaataacat aatcgatatg ctaacgtgta
     3721 atttttactt cacatatatt tatttaaaga taatttataa tactcttatc ttcactctta
     3781 ttataatgtg aattaattca caaagtatat agctatgatc aaaaaaatgt gtcagttatt
     3841 caaatttttt attaactaca gattaattta atttcaaaaa aattaaaaaa actcccaatc
     3901 aatctaagac tttattttca cctcaagatt tacgtcgtca ttgagaaatg aatcatatct
     3961 ttatagatta attgggaaat tttagtttct aatatttaat taaatgcttg atgtaaagcg
     4021 tcagaagaat gcttccacat accttcatca tggttcatta aaaagtcttt taaaatagct
     4081 ttattctcgt caccaatttg atcaatgata atatgatgtt tcattgattt atccatcata
     4141 ttaacatgtt caggcatact tttataacca cgacgaattg ctttattcac taataaatag
     4201 cacgctgtta aaccagcata atatggtcct tgttcattac gttctgttgt tacccaacac
     4261 aaccaatatt ctttagcttc atcgccttca acagcagctt tatcagtaat ccatttcacg
     4321 cctttttcaa ctttggcgcg agcatgcatg cctccaatat caataaatgc ttctttgtta
     4381 gcaacatcga taaaaactgg tgcaatattg tctaagctaa tcgaaccaat atttgtacct
     4441 ttatgaccat ctagagggtc attttttatg atattaaaat taaagccttt tttctcagac
     4501 aatgatataa cctccatatt taacgataac aattttagcc ctgtttaatt aagctcatta
     4561 atcaaatttt caatagcttc tctaattgtc ttatctttaa tctttgcaac catttctcta
     4621 ggataatata atttatagtc ttggcgatta atgcctgtaa tactatgaat gactaaagat
     4681 tgattgctta tttctctaat cgtaccatct tgtctcaata aatgaatcgg tttgcgattt
     4741 gaccccggtc gatcatagtc atatggcaaa tccgaaaatg cttcactcac aaaataataa
     4801 tctggattaa taccacctgc ttcaaacagt tcttgcagtt ctgatattgt aataattgag
     4861 ccatcaaatg gaatatattt aaataagtct cgattaataa atcgacttgc taaatcactt
     4921 aaaatagcat catcttcttt tgtccatttt tccaaataat acgtaactac cgcttcatcg
     4981 agttcaacat attgttcaat cgtaactgtc tcttcaaaaa atggaataaa atcatgtgga
     5041 tgcaacttaa attcatagcc ttcattataa agctgttttg cgcgtttcaa acaattatta
     5101 agcagcactt ctccaccacg actaactggg tggaaataaa tttgccaata catttgataa
     5161 cgactcataa taaagttttc aactgcatgc ataccacttt ctttgattag tacttcatct
     5221 ttagaaggtc gcattaatct taaaatacgt tccatatcaa aagcaccata tgatacacct
     5281 gtgaaatacg catcacgttg taaataatcc attctatccg catcgatttg tgaagaaatc
     5341 atcgaaatga ccaatttatt atgatgcgtt ttattaatta cttccgcaac ttctcttgga
     5401 aactcaggcg acactttacg taatacagca ttcacctcag tatctccagt aataatcgct
     5461 tgtgtgtatg cttcatggtc tgtattaaat attttttcaa aactatgtga aaatggacca
     5521 tgtcctaaat catgtaataa tgcagcacat aatgccaacg gtctatcttt attgtcccat
     5581 gcatcatgac caataaatga ctcatcaatt aatcgtctaa ctatttcata cacacctaaa
     5641 gaatgtccaa agcgactatg ttctgctgta tgaaaagata ggtacagtgt tcctaattgt
     5701 ctaattcgac gtaacctttg gaattcctta gttttaatta aatcccatat caattgatct
     5761 tcaacatgaa tatatcgatg tatcgggtct ttaaaaactt tttcttctac taattttaaa
     5821 tctacatatg cgttagtcat tattcccctc cttttcgttt aatataatat ttaatttact
     5881 taaaatgctt tgtacataag tgctaagtct aacttttcgc catacatttc tggctcataa
     5941 gagcgtaaga ttgtaaaacc ttgctcttta tagtaagcta ctgcttcttc atttttatta
     6001 tctacttcta agtaaacacc ttcaaattta tcttcaaaac gtgataatcc ttcatttaac
     6061 aatgctgtac cataacctgt atgttgcgat tctggtttaa cataatgagc tgataaatat
     6121 aattcttcac cgtaaataaa gttagcaaag ccaacgatgt cattaccttc ttcaacgact
     6181 aagaataatt gttcttgaag tcttttcttt aaatgatgtt cattatatga agcttctaac
     6241 aagtgattaa ctgttgtcgc agcgtatata tttaagtatg tattaaacca agctttagtt
     6301 gcgacatctc taatttgaac aacatctttt tcagttgctt gtcttacctt gaacatgact
     6361 ttctcccctt attaacaagt tttaataacg gcattatacc acaacttgct caatacttaa
     6421 taaacaatga ttgtctattc aatttatata tttatatttt ccgttaaaat taaaaataaa
     6481 aaaataacga agcaaaaaat cacttcgttt agtatgaggt atgtcttatt gcaatatact
     6541 attccactca gttgcacgtg ctaaggcata gttgtctttc atgatgtcac caggcttttc
     6601 agcagttcca ataatataac catttaaagt ggcacctaaa aagtctaaac tatatttcat
     6661 ttgcgtaatt gctggcttcg cttttatttt tggacaatct ccaccaacta aaataactct
     6721 aaaatccttt tcagccattt gtgccttaaa attaggatat cgtttatctt gtaatgtttc
     6781 tgaccaatgt tcgataaatg ctttcaatgg tgctgaaatg ctataccaat acactggtga
     6841 tgcaaaaata attgtatcac tagccaatat tttatctaga atcggcaaat agtcatcgtc
     6901 atatgaagta atagtctctg ttgtatgtct cacgtcacgt atcggtttaa actgatgttg
     6961 tgtcacgtca atccattgat actctaaatc ttgcaaagcg aattttgtta attgtgcagt
     7021 attaccgttt ggtctactcc caccaaacaa aacagtaatc attttagcct aacctcactt
     7081 ttgattaata aatatctgtg cttttcgtta cctaattata ctatcataag ctttgcctac
     7141 cggatagtaa aacgcttaca acttttatat aaatttgacg aaatttcgtc atgccttata
     7201 taacgtcgtt tgtgatacgg ggctaattca tgatgaatta gatacatatg tcaccattaa
     7261 atacaattca tttagtcttc aattggaaac agttcatcga tatattgaat ctcatcatct
     7321 gataaaacga tatctgcagc tttaatattt tcaatgactt gttctgcacg ttttgcacca
     7381 ggaataatca catcaatagc tggtctcgtt aaataaaatg ctaatacaat gttcgcaatt
     7441 gaagtttgat gtgctgcagc taggctttcc aaagctttta cgcgacgcac attttcttca
     7501 aatacacctg gtttaaaatc acgacgtgta gtacgatggt cactaaattt agtgttctca
     7561 tcatattttc cagctaaaat accggatgct aatgggaaat atggaataaa tgtgatttgg
     7621 tgatcaacac aatattgtaa tactgcctca ttttcgcgat gcaataaatt atattctaac
     7681 tgtacaacat caacgtaacc atctttattt gcttctttaa gttgatctaa tgtgaaattt
     7741 gatacaccaa tggctttaat cttcccttgt tccttaagct cttgtaatgc tgcaactgct
     7801 tgatctttcg gagtgttgtc atccggaaaa tgaatataat ataaatcgat ataatcagtt
     7861 tgtagacgtt tcaaactatt ctcaacttgt tgttttaaat attcaggttg attgttctga
     7921 tgtacttctt gattttcatc aaattcatga gaccctttcg tagcaatttt aatttgttct
     7981 cgaggatatt ctttaacaac ttctccaacc aattcttcag aacgttctgg tccataaata
     8041 tatgccgtat ctaataaatt aataccatga ttaatggctt gacgaacaac atcttttcct
     8101 tgttcttcat ctaagttcgg atataaatta tgcccaccta ctgcgttcgt cccaagtgcg
     8161 attggaaaca cttcaacatc agatttacct aagtttacaa attgcttcat tagacccagc
     8221 tccttatctt tataactttt ccactatcac actaccatga tttaatacaa cttccaaatg
     8281 ttagaattag ggtttgaatt taggcggtgt attagaaaaa cgttatgtag aactcagtta
     8341 aaataagtat tgctttagtt gaaattcaca tagcgcgatt gctcgttagc ctttaaatta
     8401 catgtacttt tgaatcagaa attgaaaaat catttaagaa cgacaacatt aaagccatta
     8461 caaattcaat ttggtaattt ctattg
//
LOCUS       DALMNS010000110         8358 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.110, whole genome shotgun sequence.
ACCESSION   DALMNS010000110 DALMNS010000000
VERSION     DALMNS010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8358
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.110"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            3..431
                     /locus_tag="O6Y56_002273"
     CDS             3..431
                     /locus_tag="O6Y56_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001056924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575515.1"
                     /translation="MNMDLIIGRIAIWIGIAVQMYYNVVIVSMTTFIIFINAEGASPE
                     IAVLIALVIILILTLPPILTAINLENKMEVKGTLFIVYAIVAFCMFNYLSSMLWVACG
                     IFLIWTKYSKDGSTGKNENEKVDIESTENQFESKDKITKE"
     gene            481..1275
                     /locus_tag="O6Y56_002274"
     CDS             481..1275
                     /locus_tag="O6Y56_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5575516.1"
                     /translation="MRKNIELILIWMGIYIQIAYMAIIALLIYIFTLFFGSFFGFLFL
                     LTGNEIGDLLKTPTSFMIFATCLIIFSVLPVTVLAFDLSKRRILKGIILVVYAIIAAL
                     LYNFVSAILWFIVAISLFIRKKSLSAENTVAVQSHKGASKQEIRYKLVYKSVSIKHSD
                     DSIKVAHTVGNKKLIDDKTIDIHLDSSEILKKISTDANQASHKDTCKKELDSQDMIEH
                     PEFKNSTTKNLEGLNEEIHKDEATTKVDSDNTQPPIESKDHVSKKD"
     gene            1486..2262
                     /locus_tag="O6Y56_002275"
     CDS             1486..2262
                     /locus_tag="O6Y56_002275"
                     /EC_number="1.1.1.304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(S)-acetoin forming diacetyl reductase"
                     /protein_id="HDB5575517.1"
                     /translation="MTNNKVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAA
                     ALKLSSDGTKAIAIKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITE
                     EQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFA
                     VRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQI
                     ALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGGMRFR"
     gene            2406..2528
                     /locus_tag="O6Y56_002276"
                     /pseudo
     CDS             2406..2528
                     /locus_tag="O6Y56_002276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498688.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2598..3578
                     /locus_tag="O6Y56_002277"
     CDS             2598..3578
                     /locus_tag="O6Y56_002277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HDB5575518.1"
                     /translation="MEDLERVLITGGAGFIGSHLVDDLQQDYDVYVLDNYRTGKRENI
                     KSLADDHVFELDIREYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVAT
                     LRLLEIIKKYNSHIKRFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTL
                     NYCSLYNIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDF
                     VYVYDVVQSVRLIMEHKDAIGHGYNIGTGTFTNLLEVYRIIGELYGKSVEHEFKEARK
                     GDIKHSYADISNLKALGFVPKYTVETGLKDYFNFEVDTIEEVTAKEVEMS"
     gene            3541..4233
                     /locus_tag="O6Y56_002278"
     CDS             3541..4233
                     /locus_tag="O6Y56_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HDB5575519.1"
                     /translation="MKKLQLKKWKCHKNNIEDVHINKNYNYQRKLDALEEVRKGYYPI
                     KRAIDLVLSIVLLCLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMC
                     KNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVE
                     LFSSEVIGFEQRCLVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIR
                     TLMVVITGEGSR"
     gene            4443..5609
                     /locus_tag="O6Y56_002279"
     CDS             4443..5609
                     /locus_tag="O6Y56_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDB5575520.1"
                     /translation="MKIIYCITKADNGGAQTHLIQLANHFCVHHDVYVIVGNHGPMIE
                     QLDARVNVIIIEHLVGPIDFKQDILAVKVLAQLFSKIKPDVIHLHSSKAGTVGRIAKF
                     ISKSKDTRVVFTAHGWAFTEGVKPAKKFLYLVIEKLMSRITDSIICVSDFDKQLALKY
                     RFNRLKLTTIHNGIADVPAVKQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMI
                     ARFAYPKLPQNLIAAIEILKLHNSNHAHFTFIGDGPTLNDCQQQVVQAGLENDVTFLG
                     NVINASHLLSQYDTFILISKHEGLPISIIEAMATGLPVIASHVGGISELVTDNGICMM
                     NNQPETIAKVLEKYLIDSDYIKMSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ"
     gene            5590..6828
                     /locus_tag="O6Y56_002280"
     CDS             5590..6828
                     /locus_tag="O6Y56_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HDB5575521.1"
                     /translation="MENQHNSKLLTLLLIGLAVFIQQSSVIAGVNVSIADFITLLILV
                     YLLFFANHLLKANHFLQFFIILYTYRMIITLCLLFFDDLIFITVKEVLASTVKYAFVV
                     IYFYLGMIIFKLGNSKKVIVTSYIISSVTIGLFCIIAGLNKSPLLMKLLYFDEIRSKG
                     LMNDPNYFAMTQIITLVLAYKYIHNYIFKVLACGILLWSLTTTGSKTAFIILIVLAIY
                     FFIKKLFSRNAVSVVSMLVIMLILLCFTFYNINYYLFQLSDLDGLPSLDRMASIFEEG
                     FASLNDSGSERSVVWINAISVIKYTLGFGVGLVDYVHIGSQINGILLVAHNTYLQIFA
                     EWGILFGALFIIFMLYLLFELFRFNISGKNVTAIVVMLTMLIYFLTVSFNNSRYVAFI
                     LGIIVFIVQYEKMERDRNEE"
     gene            6818..8248
                     /locus_tag="O6Y56_002281"
     CDS             6818..8248
                     /locus_tag="O6Y56_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HDB5575522.1"
                     /translation="MKSDSLKENIIYQGLYQLIRTMTPLITIPIISRAFGPSGVGIVS
                     FSFNIVQYFLMIASVGVQLYFNRVIAKSVNDKRQLSQQFWDIFVSKLLLSLTVFAMYI
                     AVITIFIDDYYLIFLLQGIYIIGAALDISWFYAGTEKFKIPSLSNIVASVIVLSVVVI
                     FVKDQSDLSLYVFTIAIVTVLNQLPLFIYLKRYISFVSVNWIHVWQLFRSSLAYLLPN
                     GQLNLYTSISCVVLGLVGTYQQVGIFSNAFNILTVAIIMINTFDLVMIPRITKMSIQK
                     SHSLTKTLANNMNIQLILTVPMVFGLIAIMPSFYLWFFGEEFASTVPLMTILAILVLI
                     IPLNMLISRQYLLIVNKIRLYNASITIGAVMNLVLCLVLIYFYGIYGAAIARLITEFF
                     LLIWRFIDITKINVKLNIVSTIQCVIAAVMMFIVLGVVNHYLPPTMYATLLLIAIGIV
                     VYLLLMMTMKNQYVWQILRHLRHKTI"
BASE COUNT         2813 a         1165 c         1522 g         2858 t
ORIGIN      
        1 gtatgaatat ggatttaatt ataggaagaa tcgctatttg gataggcatc gcagtgcaaa
       61 tgtattataa cgtcgtcatt gttagcatga caacctttat catttttata aatgctgaag
      121 gagcaagccc tgaaatagct gttttaatag cattagtaat cattcttatc ttaactttac
      181 cacctatcct aaccgcgatt aacttagaga ataaaatgga agtaaaaggt acgcttttta
      241 ttgtttatgc gattgtggca ttttgtatgt ttaattacct ttcatcaatg ttatgggtgg
      301 cttgcggcat ttttcttatt tggactaaat attcaaaaga tgggtcaaca ggtaagaatg
      361 agaatgaaaa agttgatatt gaaagtacag agaatcaatt tgaatctaaa gataaaatta
      421 ctaaagaata aagtgaatat ttaaggcgga gtataaatat taaataaatg gggaatgagc
      481 atgaggaaaa atatagaatt gatattaata tggatgggta tatatattca aatagcatac
      541 atggctatta tagctttgct catatatata tttacattat tttttggatc attttttgga
      601 tttttatttt tgttaacagg taatgaaatt ggagatttat taaaaacacc cacttcattt
      661 atgatatttg ctacatgtct aattatattt tcagtcttac ctgttactgt actagcattt
      721 gacttatcta aaagaagaat tttaaaaggt atcatattag ttgtatatgc gattattgct
      781 gcgttattat acaactttgt atctgcaata ctttggttta ttgtagccat ttctcttttt
      841 attagaaaaa aatctttatc tgcagaaaat actgttgctg ttcaaagtca caaaggagct
      901 tctaaacaag aaatacgtta taaacttgtg tacaagtctg tctcgataaa acatagtgat
      961 gattcaatta aagtagcaca tacagtggga aataaaaaac taattgatga caaaacaatt
     1021 gatattcacc ttgattcaag tgaaatatta aaaaagatta gtactgacgc aaatcaagca
     1081 tcacataaag acacgtgtaa aaaggaactt gatagtcaag acatgataga acatcctgag
     1141 tttaaaaatt ccacgactaa aaacctagaa ggattaaacg aagaaataca taaagatgaa
     1201 gctacaacta aagttgacag tgataacacg caaccgccga ttgaatcaaa agaccatgtc
     1261 tcgaaaaaag attgatgaca aactaatcga gagacttaaa aaataatatt caacataagc
     1321 acttttaaaa cgacatttaa acgcattgcc aatcactaat ggtagtgcgt ttaactatac
     1381 cttaaatatc tgaatatttt gttaaatgga gttacctttg ttgtactatt caaatgaaga
     1441 ggagtaaaat gtaattaaag gaaagtaatt tgaggagtga cctttatgac aaacaacaaa
     1501 gtagcattag taactggcgg agcacaaggg attggtttta aaattgcaga acgtttagtg
     1561 gaagatggtt tcaaagtagc agttgttgat ttcaatgaag aaggggcaaa agcagctgca
     1621 cttaaattat caagtgatgg tacaaaagct attgctatca aagcagacgt atcaaaccgt
     1681 gatgatgtat ttaatgcagt aagacaaact gcagcgcaat ttggcgattt ccatgttatg
     1741 gttaacaatg ccggccttgg accaacaaca ccaatcgata caattactga agaacagttt
     1801 aaaacagtat atggcgtgaa cgttgcaggt gtgctatggg gtattcaagc cgcacatgaa
     1861 caatttaaaa aattcaatca tggcggtaaa attatcaatg caacatctca agcaggcgtt
     1921 gagggtaacc caggcttgtc tttatattgc agtacaaaat tcgcagtgcg aggtttaaca
     1981 caagtagccg cacaagattt agcgtctgaa ggtattactg tgaatgcctt cgcacctggt
     2041 atcgttcaaa caccaatgat ggaaagtatc gcagtggcaa cagccgaaga agcgggtaaa
     2101 cctgaagcat ggggctggga acaatttaca agtcaaattg ctttgggcag agtttcacaa
     2161 cccgaagatg tttcaaatgt agtgagcttc ttagccggta aagactctga ttacattact
     2221 ggacaaacaa ttattgtaga tggtggtatg agattccgtt aataatcatc cactaatgat
     2281 aaataaatcc ttattgttaa gtttaatcac ttagcagtaa ggatttttta gtgcacttag
     2341 aagggattgt attggtagaa aattaataac cgaagttcct aaatgagtta tgatgtcact
     2401 gtctaatgca tcagttgaaa gcattactaa gttccaccta gcatagttac gctgaaacat
     2461 cacaaaaacc ccactatcta atttatctca ataaaaattc acgaagttat ctcattttat
     2521 ttttataaat aaaaaatatc gataaaaagc ttacaatact ttatgttttt atgatatatt
     2581 tttaatgtat aaaagaggtg gaagatttgg aaagagtttt gataactggt ggggctggtt
     2641 ttattgggtc gcatttagta gatgatttac aacaagatta tgatgtttat gttctagata
     2701 actatagaac aggtaaacga gaaaatatta aaagtttggc tgacgatcat gtgtttgaat
     2761 tagatattcg tgaatatgat gcagttgaac aaatcatgaa gacatatcaa tttgattatg
     2821 ttattcattt agcagcatta gttagtgttg ctgagtcggt tgagaaacct atcttatctc
     2881 aggaaataaa cgtcgtagca acattaagat tgttagaaat cattaaaaaa tataatagtc
     2941 atataaaacg ttttatcttt gcttcgtcag cagctgttta tggtgatctt cctgatttac
     3001 ctaaaagtga tcaatcatta atcttaccat tatcaccata tgcaatagat aaatattacg
     3061 gcgaacggac gacattaaat tattgctcgt tatataacat accaacagcg gttgttaaat
     3121 tttttaatgt atttgggcca agacaggacc ctaagtcaca atattcaggt gtgatttcaa
     3181 agatgttcga ttcatttgag cataacaagc catttacatt ttttggtgac ggactgcaaa
     3241 ctagagattt tgtatatgta tatgatgttg ttcaatctgt acgcttaatt atggaacaca
     3301 aagatgcaat tggacacggt tataacattg gtacaggcac ttttactaat ttattagagg
     3361 tttatcgtat tattggtgaa ttatatggaa aatcagtcga gcatgaattt aaagaagcac
     3421 gaaaaggaga tattaagcat tcttatgcag atatttctaa cttaaaggca ttaggatttg
     3481 ttcctaaata tacagtagaa acaggtttaa aggattactt taattttgag gtagatacta
     3541 ttgaagaagt tacagctaaa gaagtggaaa tgtcataaaa ataacattga agatgttcat
     3601 ataaataaaa attataatta tcaaagaaaa ttagatgcac tcgaagaagt gagaaaaggc
     3661 tattacccaa ttaaacgtgc gattgactta gtattaagta tcgttttatt atgtttaaca
     3721 tttccgatta tgttcatatt cgccattgct attgtcatag attcgccagg aaatcctatt
     3781 tatagtcagg ttagagttgg gaagatgggt aaattaatta aaatatacaa attacgttcg
     3841 atgtgtaaaa acgcagagaa aaatggtgcg caatgggctg ataaagatga tgatcgtata
     3901 acaaatgtcg ggaagtttat tcgtaaaaca cgcattgatg aattaccaca actaattaat
     3961 gttgttaaag gggaaatgag ttttattgga ccacgcccgg aacgtccgga atttgtagaa
     4021 ttatttagtt cagaagtgat aggtttcgag caaagatgtc ttgttacacc agggttaaca
     4081 ggacttgcgc aaattcaagg tggatatgac ttaacaccgc aacaaaaact gaaatatgac
     4141 atgaaatata tacataaagg tagtttaatg atggaactat atatatcaat tagaacattg
     4201 atggttgtta ttacagggga aggctcaagg tagtcttaat ttacttaata agttcaaata
     4261 aaagttacat tttaaagatt gtgaccaatt gttacagtat aacgaggaat cccttgagac
     4321 agtatcaaat ggcattaaga aatatgtgcc atcattgatt tgcatggcta taaatactat
     4381 tcatctgatg agatagctat gttaagaaat tgaaagtata gcgttaaagg ggtttgtaac
     4441 agttgaaaat tatatattgt attactaaag cagacaatgg tggtgcacaa acacatctca
     4501 ttcaactcgc caaccatttt tgcgtacacc atgatgttta tgtcattgta ggcaatcatg
     4561 gaccaatgat tgaacaacta gatgcaagag ttaatgtaat tattatcgaa catttagtag
     4621 gtccaattga ctttaaacaa gatattttag ctgtcaaagt gttagcacag ttattctcga
     4681 aaattaaacc tgatgttatc catttacatt cttccaaagc tggaacggtc ggacgaattg
     4741 cgaagttcat ttcgaaatcg aaagacacac gtgtagtttt tactgcgcat ggatgggctt
     4801 ttacagaggg tgttaaacca gctaaaaaat ttctatatct agttatcgaa aaattaatgt
     4861 cacgtattac agatagcatt atttgtgttt cagatttcga taaacagtta gcgctaaaat
     4921 atcgatttaa tcgattgaaa ttaaccacaa tacataatgg tattgcagat gttcccgctg
     4981 ttaagcaaac gctaaaaagc caatcacata acaatattgg cgaagtagtt gggatgttgc
     5041 ctaataaaca agatttacag attaatgccc cgacaaagca tcaatttgtt atgattgcaa
     5101 gatttgctta tccaaaattg ccacaaaatc taatcgcggc aatagagata ttgaaattac
     5161 ataacagtaa tcatgcgcat tttacattta taggcgatgg acctacatta aatgattgtc
     5221 agcaacaagt tgtacaagct gggttagaaa atgatgtcac atttttgggc aatgtcatta
     5281 atgcgagtca tttattatca caatacgata cgtttatttt aataagtaag catgaaggtt
     5341 tgccaattag cattatcgaa gctatggcta caggtttgcc tgttatagcc agtcatgttg
     5401 gcggtatttc agaattagta actgataatg gtatatgtat gatgaacaac caacccgaaa
     5461 ctattgccaa agtcctggaa aaatatttaa tagacagtga ttacatcaaa atgagtaatc
     5521 aatctagaaa acgttattta gaatgtttta ctgaggagaa aatgattaaa gaagtggaag
     5581 acgtttataa tggaaaatca acacaatagt aaattactaa cattgttact tatcggttta
     5641 gcggttttta ttcagcaatc atcggttatt gccggtgtga atgtttctat agctgacttt
     5701 atcacattac taatattagt ttatttactg tttttcgcta accatttatt aaaggcaaat
     5761 cattttttac agtttttcat tattttgtat acatatcgta tgattattac gctttgttta
     5821 ctattttttg atgatttaat atttattacg gttaaggaag ttcttgcatc tacagttaaa
     5881 tatgcatttg tagtcattta tttctattta gggatgatca tctttaagtt aggtaatagc
     5941 aagaaagtga tcgttacctc ttatattata agcagtgtga ctataggtct attttgtatt
     6001 atagctggtt tgaacaagtc ccctttacta atgaaattgt tatattttga tgaaatacgt
     6061 tcaaaaggat taatgaatga ccctaactat ttcgcgatga cacagattat tacattggta
     6121 cttgcttaca agtatattca taattacata ttcaaggtcc ttgcatgtgg tattctgcta
     6181 tggtcattaa ctacaaccgg atctaagact gcgtttatca tattaatcgt cttagccatt
     6241 tatttcttta ttaaaaagtt atttagtaga aatgcggtaa gtgttgtgag tatgttagtg
     6301 attatgctga tattactttg ttttaccttt tataatataa actactattt attccaattg
     6361 agcgatctag atggcttacc atctttagat cgaatggcgt ctatttttga agagggattt
     6421 gcatcattaa atgatagtgg atctgagcga agtgttgtat ggataaatgc catttcagta
     6481 attaaatata cattaggttt tggtgtcgga ttagtggatt atgtacatat tggctcgcaa
     6541 attaatggta ttttacttgt tgcccataat acatatttgc aaatttttgc ggaatggggc
     6601 attttattcg gtgcgttatt tatcatattt atgctttatt tgctgtttga attatttaga
     6661 tttaatattt ctgggaaaaa tgtaacagca attgttgtaa tgttgacgat gctgatttac
     6721 tttttaacag tatcatttaa taactcaaga tatgtcgctt ttattttagg aattatcgtc
     6781 tttattgttc aatatgaaaa gatggaaagg gatcgtaatg aagagtgatt cactaaaaga
     6841 aaatattatt tatcaagggc tataccaatt gattagaacg atgacaccac tgattacaat
     6901 acccattatt tcacgtgcat ttggtcccag tggtgtgggt attgtttcat tttctttcaa
     6961 tatcgtgcaa tactttttga tgattgcaag tgttggtgtt cagttatatt ttaatagagt
     7021 tatcgccaag tccgttaacg acaaacggca attgtctcag cagttttggg atatctttgt
     7081 tagtaaatta ttattgtctc taacagtttt tgcgatgtat atcgctgtga ttacaatctt
     7141 tatagatgat tactatctta ttttcctact acaaggaatc tatattatag gtgcagcact
     7201 cgatatttca tggttttatg ctggaactga aaagtttaaa atacctagcc ttagtaatat
     7261 tgttgcgtct gttattgtat taagtgtcgt tgttatcttt gtcaaagatc aatcagattt
     7321 atcattgtat gtatttacta ttgctattgt gacggtatta aaccaattac ctttgtttat
     7381 ctatttaaaa cgatacatta gctttgtttc ggttaattgg atacacgtct ggcaattgtt
     7441 tcgttcgtca ttagcatatt tattaccaaa tggacagctc aacttatata ctagtatttc
     7501 ttgcgttgtt cttggtttag taggcacata ccaacaagtt ggtatctttt ctaacgcatt
     7561 taatatttta acggtcgcaa tcataatgat taatacattt gatcttgtaa tgattccgcg
     7621 tattaccaaa atgtctatcc agaaatcaca tagtttaact aaaacgttag ctaataatat
     7681 gaatattcaa ttgatattaa cagtacctat ggtctttggt ttaattgcaa ttatgccatc
     7741 attttattta tggttctttg gtgaggaatt cgcatcaact gtcccattga tgactatttt
     7801 agcgatactt gtattaatca ttcctttaaa tatgttgata agcaggcaat atttattaat
     7861 agtgaataaa ataagattat ataatgcgtc aattactatt ggtgcggtaa tgaatttagt
     7921 attatgtctt gttttgatat atttttatgg aatttacggt gctgctattg cgcgtttaat
     7981 tacagagttt ttcttgctca tttggcgatt tattgatatt actaaaatca atgtgaagtt
     8041 gaatattgta agtacgattc aatgtgtcat tgctgccgtt atgatgttta ttgtgcttgg
     8101 tgtggtcaat cattatttgc cccctacaat gtacgctacg ctgctattaa ttgcgattgg
     8161 tatagtagtt tatcttttat taatgatgac tatgaaaaat caatacgtat ggcaaatatt
     8221 gaggcatctt cgacataaaa caatttaagt atcggtaacg ctatacttta gaaatttaag
     8281 attaagaaga aaaggcaatt tcttattgaa aaatggaagt tgtctttttt gattctcttt
     8341 aaaagcggga aacaaaag
//
LOCUS       DALMNS010000111         8284 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.111, whole genome shotgun sequence.
ACCESSION   DALMNS010000111 DALMNS010000000
VERSION     DALMNS010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8284
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.111"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..2696)
                     /locus_tag="O6Y56_002282"
     CDS             complement(<1..2696)
                     /locus_tag="O6Y56_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3427 domain-containing protein"
                     /protein_id="HDB5575523.1"
                     /translation="MSRLLNDFNQSLKKGFIDKDIPHKGNYTPKLLVNNKNEKVLSTI
                     IDELQKCETFYFSVAFITESGLASLKAQLLDLSNKGVKGKILTSNYLGFNSPKMYGEL
                     LKLKNVEVRLTDIAGFHAKGYIFEHKDYSSMVIGSSNLTSNALKVNYEHNVLLSTMKN
                     GDLVDSVKNEFDLLWQNSTPLTQQWINSYKESFEYRSLEKLAEVEQTQMLLADKVKKS
                     VEIVPNLMQAEALRSLKAIRDKAKDKALIISATGTGKTILCALDVREVNPNKFLFIVH
                     NEGILNRAKEEFKKVLPTKNDSDFGLLTGKHRDVDAKYLFATIQTLSRDDNFKQFDEN
                     EFDYIVFDEAHRSAASTYQRVFNYFKPKFMLGMTATPERSDELSIFEMFDYNIAYEIR
                     LQAALESDILCPFHYFGVTDYVHQGIKEDDVTKLRYLTSDERVNYIIQKTDYYGYSGE
                     ILQGLIFVSSKKEAYDLADKLSSKGIKSVALTGDDSVNYRQIVIEKLREGKINYIITV
                     DLFNEGIDIPEVNQVVMLRPTESSIIFIQQLGRGLRKSANKEYVTVIDFIGNYKTNYL
                     IPIALSGDQSQNKDNYKKFLTNNDSINGVSTINFEEVAKKQIYNSLDAVSLNQNKLLL
                     KAYEEVENRLGHMPLLMDFIQQHSIDPSVIFSKFSNYYEFLVWYKKIDALLTENESKN
                     LVFFSRQIAPGLKRIDSLVLEELLKNELTYDELKNKMLNEVKDITEDDIDTSLRILDF
                     SFYNAGIEKIYGSPIIERNERMIRLSDAFTNALSNQTFKIFLEDLIELSKYNNEKYQK
                     GKNGLILYNKYSREDFSKIFNWSKNGSSVIMGYMIRSQEMPIFITYDKHEDISDSTKY
                     EDEFLSQDELKWFTKSNRTLKSKEVQKILSHRAKGIKMYIFV"
     gene            complement(2698..3090)
                     /locus_tag="O6Y56_002283"
     CDS             complement(2698..3090)
                     /locus_tag="O6Y56_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(deoxy)nucleoside triphosphate
                     pyrophosphohydrolase"
                     /protein_id="HDB5575524.1"
                     /translation="MKKVINVVGAIIFSDNKILCAQRSEKMSLPLMWEFPGGKVEKNE
                     TEKDALIREIREEMKCDLIVGDKVITTEHEYDFGIVKLTTYKCNLNKELPTLIEHKSI
                     EWLPINELDKLNWAPADIPAVNKIMTEG"
     gene            3377..5014
                     /locus_tag="O6Y56_002284"
     CDS             3377..5014
                     /locus_tag="O6Y56_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000356876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HDB5575525.1"
                     /translation="MDKELWIERANDSLVKHFYEQQSDIEQREGFESKLTFGTAGIRG
                     KFGLGEGRLNKFTIEKLALGLARYLNAQTNNPTIVIHYDIRHLSTEFAQIIANVLANH
                     QITVYLPDTYKTTPELSFAVRNLNTTAGIMITASHNPKDYNGIKVYGSDGAQLSTDAS
                     ELVSRYIEDVGNPLQIDISFSKHNSSYIKPLPKSVTENYIKHVQNMIGYIPKSDLQVV
                     FTSLHGTSVPIVPKLLKSLNFNQFNLVEAQCKPDPNFSSVQSANPEDHRAFDQAVELA
                     NKSHADLLISTDPDADRLGIAERDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMI
                     QSIVSSELTKSLARYNNVEYKEVLTGFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPF
                     VRDKDAVQIVPLIIKYASELKLYGKTLKDELEQIYQTVGRHEDTLFSHTLEGLEGKKK
                     IESIMTHFRSNPPQEIQGLKVKAIEDYLTSEVYQLDKDTTSQINSPKSNVIRVLFDEG
                     FIALRPSGTEPKIKLYVSLKCPNFDDVAQKINAMIFS"
     gene            5298..5564
                     /locus_tag="O6Y56_002285"
     CDS             5298..5564
                     /locus_tag="O6Y56_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575526.1"
                     /translation="MKGSKQILLIMGIISLIVLFIFTLFIMAQYAKHYEQKSDSSNAH
                     TLNSSSAIIEQHTMSNLASLDLYAPVRNITSSRDIHPIYFMTKD"
     gene            5708..6016
                     /locus_tag="O6Y56_002286"
     CDS             5708..6016
                     /locus_tag="O6Y56_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575527.1"
                     /translation="MTVNIIVSIVFCISIVIIGIYVAITKDFTLISFINQTTIADKHK
                     NQIAYIFTLCISLSAVFLMSSILSFEYDFIALAFLFLTIALFLIALFYVCLYKITKYP
                     "
     gene            complement(6124..6357)
                     /locus_tag="O6Y56_002287"
     CDS             complement(6124..6357)
                     /locus_tag="O6Y56_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575528.1"
                     /translation="MLRSLCKHNRILINAIKVGIEMKYKISLAYNLAIIIGSLIILCI
                     LISRGYDIYVILIPILTILASLINLICDIKKHK"
     gene            complement(6338..7525)
                     /locus_tag="O6Y56_002288"
                     /pseudo
     CDS             complement(6338..7525)
                     /locus_tag="O6Y56_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501256.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(7907..>8284)
                     /locus_tag="O6Y56_002289"
     CDS             complement(7907..>8284)
                     /locus_tag="O6Y56_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HDB5575529.1"
                     /translation="EGQPTEEITKQPVDKIVEFGGEKPKDPKGPEKPEKPSRPTHPSG
                     PVNPDNPGLSKDRAKPNDPVHSMDKNDKVKKSKIAKESVANQEKKRAELPKTGVESTQ
                     KGLIFSSIIGIAGLILLARRRKN"
BASE COUNT         2797 a         1404 c         1066 g         3017 t
ORIGIN      
        1 tgtacaaaaa tatacatttt aattcctttt gctctatggg acaaaatttt ctgaacttct
       61 tttgatttta gcgttctatt agatttagta aaccatttta attcatcttg acttaaaaat
      121 tcatcttcat attttgtgct atcacttata tcctcatgct tatcataagt gataaatatt
      181 ggcatttctt ggcttcttat catgtatccc atgattacag acgaaccatt tttactccaa
      241 ttaaatattt tactaaaatc ttctcttgaa tatttattat ataaaatcag tccattttta
      301 cctttttggt atttttcatt gttatacttt gataattcaa taagatcttc taaaaatatt
      361 ttaaatgttt gattacttag agcattagta aatgcatcgc ttagtcttat cattctttca
      421 ttacgttcta taatgggact tccatagatt ttttcaattc ctgcgttgta aaatgaaaaa
      481 tctaaaattc ttaatgaagt atctatatca tcttctgtta tatccttaac ttcgttcaac
      541 attttatttt ttaattcatc atatgttaat tcatttttta aaagttcttc taaaactaaa
      601 ctatcgattc ttttcaatcc aggtgctatt tgccttgaaa agaaaaccag atttttagat
      661 tcattttccg tcaataaagc atctattttt ttataccata ctaaaaactc gtaataatta
      721 ctaaatttag aaaatataac gcttggatct atagaatgtt gttgtataaa atccattagt
      781 aacggcatgt gtcccaatct attttcaact tcttcataag cttttaataa taatttattt
      841 tgattcaatg atactgcatc caatgaattg taaatctgtt ttttagcaac ttcttcaaaa
      901 ttaattgtag atactccatt aatcgaatcg ttattcgtta aaaacttctt ataattatct
      961 ttattttgcg attgatctcc agaaagcgca atcggaatta aataattggt cttataatta
     1021 ccaataaaat caattacagt aacatactct ttatttgcac tttttcttaa ccctctacca
     1081 agttgctgaa tgaatataat actagactca gttggtctca gcattacaac ttgattgact
     1141 tctggaatat caataccttc gttaaataga tctacagtta taatatagtt aatcttacct
     1201 tctcttaatt tttctattac aatttggcga taattaacac tatcgtctcc tgttaaagca
     1261 acacttttaa tcccttttga acttagttta tccgctaaat cataagcttc ttttttgcta
     1321 cttacaaaaa ttaatccttg taaaatttca cctgaatatc catagtaatc tgtcttttga
     1381 ataatataat taactctttc atcagaagtt aaatatctca gtttagttac atcatcttct
     1441 ttaatacctt gatgtacata atcagtcaca ccaaaataat gaaatggaca taaaatatca
     1501 ctttctaatg ctgcttgtaa ccttatttca taagcaatat tataatcaaa catttcaaat
     1561 atacttaatt catctgatct ttctggtgtt gcagtcattc ccagcataaa cttaggtttg
     1621 aagtaattaa atactcgttg ataagtagat gcagcagaac gatgtgcttc atcaaaaaca
     1681 atataatcaa attcattttc atcaaattgc ttaaaattat catctctaga taatgtttga
     1741 atggttgcaa ataaatattt ggcatcgaca tctctatgtt tgcctgtcaa caatccaaaa
     1801 tcactatcat tttttgtagg taatactttt ttaaattctt ccttagctct atttaaaatc
     1861 ccctcattat gaacaataaa taaaaattta ttagggttta cttctctaac atctaatgca
     1921 cataaaatcg ttttacctgt accagttgca gatattatta acgccttatc tttggcttta
     1981 tccctaatag cttttaatga ccttaatgct tctgcttgca ttaaattcgg tacaatttcc
     2041 actgattttt tcaccttatc agctagcagc atttgagttt gttcaacctc cgccaatttt
     2101 tctaaggagc ggtactcaaa tgattcttta tatgaattaa tccattgctg agtcagtggg
     2161 gtactgtttt gccataacaa gtcaaattca ttttttacac tatcaaccaa atccccattt
     2221 ttcatagtag acagtaaaac attatgctca taattaacct ttaacgcatt cgatgttaaa
     2281 ttagagcttc ctattaccat agaactataa tccttatgtt caaaaatata tcctttggca
     2341 tggaatccag caatatcagt taatcttacc tctacatttt ttaatttaag taattctcca
     2401 tacattttag gactattaaa ccctaagtaa tttgatgtta atattttccc tttaacaccc
     2461 ttattgctta aatctaatag ctgagccttt aagctggcta acccgctttc tgttataaaa
     2521 gctacagaaa aatagaacgt ttcacatttt tgaagttcat ctataattgt tgaaagaact
     2581 ttttcatttt tattatttac taaaagcttc ggtgtataat tccctttatg aggaatatct
     2641 ttgtctataa aacctttttt taaagattga ttgaaatcat ttagtaatct actcatatta
     2701 tccctcagtc ataattttat taacggctgg tatatctgct ggagcccaat ttaatttatc
     2761 aagttcattt ataggcaacc attcaatact cttatgttca attagagttg gtaactcctt
     2821 gttcaaatta catttgtatg ttgttaactt aacaatgcca aaatcatatt catgttctgt
     2881 agttataact ttgtcaccaa caattagatc acatttcatt tcttctctaa tttctctaat
     2941 caaagcgtct ttttcagttt cattcttttc aaccttaccg ccaggaaatt cccacattaa
     3001 aggcagactc attttttcac ttctctgtgc acaaagaatt ttgttatcag aaaaaataat
     3061 agctcctact acattgatta cttttttcat aagactcacc cttcaaatta aaatcatctt
     3121 aattgttatt ctatcaaaaa ttacaaaact atatataaag caatattaaa aattaatatt
     3181 ttacattcac atgcacactc tactccatgc attttcatac acatctatta tataatactt
     3241 gtgaaaagta ttgtcttggg gctgtgtttt ttacttttgg ggcgtatttc tttataattc
     3301 attacataaa tgtaagggct ttagttttca tgttttatta agtctaactg agattttgaa
     3361 aggatgttta gcaacaatgg ataaagaatt atggatagaa agagctaatg atagtttagt
     3421 taaacatttt tatgagcagc aatctgacat tgaacagcga gaaggttttg aaagtaaatt
     3481 aacgtttggt actgcgggta tacgcggaaa attcggtctt ggtgaaggtc gacttaataa
     3541 gtttactatt gaaaaattgg cattaggttt agcgcgttat ttaaatgccc aaacaaacaa
     3601 tccaacaata gtcattcatt atgatattag acatctttca actgaattcg cccaaattat
     3661 tgctaatgta ttagcaaacc atcaaataac agtttattta cctgatacat ataaaacgac
     3721 accggaatta tcgttcgcgg tgcgcaatct taatactact gctggcatta tgattacagc
     3781 aagtcataat ccgaaagact ataacggcat taaagtatat ggttctgatg gcgcgcaact
     3841 atcaacagat gcatcagaac ttgtaagtcg ctatattgaa gacgttggca atccattaca
     3901 gattgatata tctttttcaa aacacaattc atcatatatc aaaccattac ctaaatctgt
     3961 aacagaaaat tacattaaac atgttcaaaa tatgattggt tatattccta aatctgattt
     4021 acaagttgtg ttcactagtt tgcatggtac aagtgttccg attgtaccta agttattaaa
     4081 atctttgaat ttcaatcaat ttaatcttgt agaagcacaa tgtaaacctg atccgaattt
     4141 cagctcagtt caaagtgcta atcctgaaga tcatcgcgct tttgatcaag cagtcgaact
     4201 tgcaaataaa agtcatgcag acttattaat atcaactgac cctgatgcgg atcgacttgg
     4261 tattgctgaa cgtgatgcac atggtcatat cacgtatttt aatggcaacc aaattggtgc
     4321 gctgttactt aattatcgta ttcaacaaac gtctcaatta cgtcaccgct taatgattca
     4381 atctattgta agtagtgagt taacaaagtc attagcacgc tataataatg ttgaatacaa
     4441 agaggtgctg acgggcttta aatttattgc tcaggaaata agacaactgg acgatcatca
     4501 aaatatgatt ttcgcctttg aagagagtta cggttttcta tcagaacctt ttgtacgtga
     4561 taaagatgcc gtacaaattg tgccactcat tataaaatac gcttctgagt taaaattata
     4621 tggcaaaaca ttgaaagatg aattagaaca gatttatcaa actgttggta gacatgagga
     4681 tacattattc tcgcatacgc tagaaggatt agaaggtaag aaaaaaattg aatcaattat
     4741 gacacatttc cgttcaaatc caccgcaaga gattcaagga ctgaaagtga aagcaattga
     4801 agattattta actagcgagg tttatcagtt ggataaagat acaacgtcgc agattaattc
     4861 tcctaaatca aatgttattc gtgtcttatt tgacgaagga tttatcgctt tacgtccttc
     4921 tggtactgaa cctaaaatta aattatatgt gtcgttaaaa tgtccgaatt ttgatgatgt
     4981 agctcaaaaa attaatgcga tgatttttag ctaattaaaa attttataca tcgaaatatt
     5041 acatttcatt ttatacttat cagccctttt gaaactagaa tccttatgtt ttcgcgtttt
     5101 gaaggggcta atttgtaata atttttcaaa agtatattag aaaattaatt ttcatgtatt
     5161 tttcatatta agcggtaata atataataat taataccgcg acctatttaa ttgttttcgc
     5221 gatgaaaaag gtttagaatt acaaaaataa ctattttaaa tttagttaca aatatatttt
     5281 agaaaggatg tgaaataatg aaaggctcta aacaaatact tttgattatg ggcattatat
     5341 ctcttattgt tttatttatt tttacactat tcatcatggc gcaatatgca aaacattatg
     5401 aacaaaaatc cgacagttcc aacgcacata ctttaaattc atcatcagcc ataattgagc
     5461 aacatactat gtcgaattta gcgtctctag atttatacgc tcctgttcgt aacattactt
     5521 ctagtcgtga tattcatccc atttatttca tgacaaaaga ttaaaacttc ctttttcata
     5581 accccattca ttcaactaat aaattaaaaa ttgataaaaa cgtactgttt tttagaaaca
     5641 tacatatata agaaacacat ccattactaa aagacagtac attatattct atcgggaagg
     5701 tgcaacaatg accgtcaaca tcatagtttc tatcgtgttc tgtatcagta tagttataat
     5761 aggcatttat gtcgcaataa ctaaagattt cacactaatc tcttttataa atcaaacgac
     5821 cattgcagat aaacacaaga accaaattgc atatatattt acgctatgta taagtttgag
     5881 tgccgtattt ttaatgtctt caattctaag ctttgaatat gattttattg cattagcatt
     5941 cttattttta acgatagcat tatttcttat cgcattattc tacgtttgct tgtataaaat
     6001 tacaaaatac ccataaatgt ttgcgatagt gtgttggtta gatttaatgg tacgctgtca
     6061 gtaagcaatt gtttgcgaaa aaaatacaac cttgtatgaa tacaaagttg cattaatata
     6121 gaatcattta tgctttttaa tatcacaaat taaattgatt aaactagcta aaatagtcaa
     6181 aattggaatc aagattacat aaatatcata acctctagat attagtatac ataatataat
     6241 tagcgaccct attataattg ctaaattata agccaaacta attttatatt tcatttcaat
     6301 tcccacctta atagcattga ttaaaattct attatgttta catagacttc ttaacaaacc
     6361 ttaacccagc taagcattga aataattgca cctcctgata taaatatatt acttaagctt
     6421 agtaaaggta taattaaact tatcagtcct aaagacaatg tatccgctgc gtaattcgat
     6481 gtagatgaga tactaaatac tttccccatc aaatgatttg gcgtttttat ttgaatggca
     6541 actgatcttg ttagtccctc tatagattgt ccaagtccca ctaaagttgc acctatatat
     6601 aatatcgcca tacttggaaa cacattaatt atcgataagc caatccccaa actaaaacac
     6661 caatactaaa tttaaagatt aatcgttttt ctgacagcaa acccataatc aatgacatta
     6721 gtaaagacgc aatacctaaa catgatgtag ctagtccata tacaccaacg tcctctttta
     6781 atatattaga aataaacaat ggtaatgcaa cacgccaaag gccagtatta atcattatgc
     6841 aggcaaattg aatgataatg ataaatggaa tttctttaga ttgtttcaag aattcccaag
     6901 tttcagaaaa ttcttttttt gagtgtctat caatcatgtt gttatttgta tattttaaaa
     6961 gtgcattaaa aataaatcct aaaaatagca atatactgca aataaaaaag acgccaacat
     7021 taccaactag tattacaatg acaccaatta aagcaggtaa aataatattt gagcctcttt
     7081 gcaaactatc gattaacgca ttacttgttg ctaaatgctc ctcctcaata atttcaggaa
     7141 gaattgccct aaacgcagga tccgtatagc agttaataat ggtgatagct gtagatatgg
     7201 ttagaagcgt cagataattt aaatttgatg ttattgcaag taaaggaata ataattataa
     7261 tcaaacttag tataagatca gatagataaa gtattttctt tttattatgt ttatcagaat
     7321 atgcgccacc gaaaatacca aatataataa atggtagtgt ttgactcata accatcattg
     7381 ataattttaa agatgattgg tttgtcaatt caacggtaaa ccaaattatt tgcaacgaaa
     7441 acagcacaaa gcaactccga cgtaagaaat taccaatcaa taaatatgta aagtttctat
     7501 ttttcaaaac ttctaagtac aacatattta tcacctctca taaaaataat tgaatgcatc
     7561 caccagcctt tttagacctt cttctaaact ctctttatcc aaagcgcaat taattctaat
     7621 ataatttagt cagttaaata tcagttattt cgaaatatac atactacttg aaacaccata
     7681 cataacccca aaaatgacta ctaagaggtt atattctact aattatgatt atattaaata
     7741 tgaaaatatt atcaaaaaat caaatttata acaaaaatac accccttaaa gttaggtctt
     7801 tcaatccaac ttttggggtg tatatcattt tcatcatatt ctaggttgtt tttaacaaac
     7861 taaatatagt aagtgcgaaa caactattat ttaaatatga attattttaa ttttttcttc
     7921 tacgagccaa taatattaat ccagcaattc caattatact actaaagatc aaaccttttt
     7981 gcgtgctttc tacacctgtt tttggtaatt ctgctcgttt tttctcttga ttagctactg
     8041 attctttagc aattttagat tttttaactt tatcattttt atccattgaa tgaactggat
     8101 catttggttt tgctctgtct ttcgataatc ctggattgtc aggatttact gggccacttg
     8161 gatgagttgg tctgctcggc ttctctggtt tttcaggtcc ttttggatct tttggtttct
     8221 cgccaccgaa ctctacaatc ttatctactg gttgttttgt gatctcttct gttggttgac
     8281 cctc
//
LOCUS       DALMNS010000112         8057 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.112, whole genome shotgun sequence.
ACCESSION   DALMNS010000112 DALMNS010000000
VERSION     DALMNS010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 8057)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8057)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8057
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.112"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            144..767
                     /locus_tag="O6Y56_002290"
     CDS             144..767
                     /locus_tag="O6Y56_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDB5575530.1"
                     /translation="MKEDRRIRKTKSSIKQAFTKLLQEKDLEKITIRDITTRADINRG
                     TFYLHYEDKYMLLADMEDEYISELTTYTQFDLLRGSSIEDIANTFVNNILKNIFQHIH
                     DNLEFYHTILQLERTSQLELKINEHIKNNMQRYISINHSIGGIPEMYFYSYVSGATIS
                     IIKYWVMDKQPISVDELAKHVHNIVFNGPLRIMAENRLHKSNLDSLT"
     gene            813..1757
                     /locus_tag="O6Y56_002291"
     CDS             813..1757
                     /locus_tag="O6Y56_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HDB5575531.1"
                     /translation="MITSFRHSEDIDKHIIKTPLDHTASWINVVEPDREEIENLMEQY
                     NIPEDFIRDPLDSEESSRIEYDEDTGYSLIIIDLPIVNSTNRSVLSFVTIPLGIIIGN
                     GIIVTVCDAENEFLENLPKRDINLKFHSRFALEILTTIADHYNRNLRLLNKSRIRIEK
                     ELKNNITNKQLFKLMEVEKSLVYFLAALKGNDTIIKKLFRLPAIKRFEEDEELLEDLI
                     IENNQAIETTELHQRILESITTSYASLLSNDMNTIMKTLTLFTVLLTLPTLVFSFFGM
                     NVPLPIDDHSYISWIIVVGISLILVVIVSIFLWRKQKL"
     gene            complement(1842..3284)
                     /locus_tag="O6Y56_002292"
     CDS             complement(1842..3284)
                     /locus_tag="O6Y56_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sucrose transporter subunit IIBC"
                     /protein_id="HDB5575532.1"
                     /translation="MNYKQSAEDILNAIGGEENLDAMAHCATRLRLVLNDESLVNEEA
                     LNNMDVVKGTFSTGGQYQIIIGSGTVNKVFSELEKLTGKEASTTSEVKAQSAKNMNPL
                     QRFVKMLSDIFVPIIPAIVAGGLLMGLNNILTAKDLFFSGKSLIDVYSQFAGLAEMIN
                     VFANAPFTLLPILIGFSAAKRFGGNPFLGAALGMILVHPSLMSAYDFPKAVEAGKAIP
                     YWDVFGLHINQVGYQGQVLPMLVAAYILASIEKGLRKVIPTVLDNLLTPLLSIFITAF
                     LTFSFVGPITRQLGYWLSDGLTWLYEFGGAIGGLIFGLLYAPIVITGMHHSFIAVETT
                     LIADATKTGGSFIFPIATMSNVAQGGAAIAAFFIIKQNKKLKGVASAAGISALLGITE
                     PAMFGVNLKLRYPFIGAIVGSGIASAYIAFFKVKAIALGTAGLPGFISINPVHAGWLH
                     YFVGMTISFIVAITVTLILSKRKANKEVVE"
     gene            3467..3850
                     /locus_tag="O6Y56_002293"
     CDS             3467..3850
                     /locus_tag="O6Y56_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501125.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgA family protein"
                     /protein_id="HDB5575533.1"
                     /translation="MKERGYIEQLWREEKYHVLLHSQQAYQMIRNALKTDLSLHQVQQ
                     MIDDALLIEPSIGSVCNAFDHMWGYFKKCANEEERQQSKLLKADFINGKIDTQTLLDF
                     LAELANKYDVQYLLQSRVLNTKRKR"
     gene            5338..7443
                     /gene="rsp"
                     /locus_tag="O6Y56_002294"
     CDS             5338..7443
                     /gene="rsp"
                     /locus_tag="O6Y56_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator Rsp"
                     /protein_id="HDB5575534.1"
                     /translation="MTCQLKIHHTLSTIPSRNINNIMVLFSLTSKLNITINGETKDVS
                     NYIILINHGDIYNINHGENIIELMIPVFYFYQQDDDFFNGYLDRHLLQSSNYIKSLIA
                     DLISTPTSSSLMGKNIGQSIIDTLLKEAFIRIDHEYLPNIALSNPVFIDCVNYIHDNI
                     DAHLSLKDIAMHCNISESYCSNLFVRYLSMNFKDYFTSIKLVNAINLLLSTKHSITTV
                     SELAGFNSHTNFANQFKNYLHFSPKQFRSLVSKITEPPQIHFQQDNVSQFTELISTID
                     LTAQLATNTTDIHIDDFNPKDRSQRAKVFVRFSNFNELFQFIFNEYYDINFEHLPKPV
                     VFIDDIHDIEISQTNYNLLNRCFEKLFEKNIGLAIAIKSTQQFETMKQLILTFLQGNQ
                     DYKTSKKLVKFMLVFCSNSMTAEEIHLCHLKIKNKNKEIKYSVTVDGFLETYSTVEQV
                     YDVMQRLKFHYYFIDIENSKTATHLITKNQHYHQTDTHFEQYKKFILDSGISSTQFVY
                     NNLSVSGFKYTNDGKNPIQLSDIVYHLIALLRYGGGISYQLLDDHSNYISLYNKYGSP
                     LPLMHLYKMFRPFINEDIEITNNYVLSRKDNNYHFLLFNKINDRYMSDVKQDFIFHNE
                     LPQDSLMIIKTLNHEHGSIQHLLPISDQLVYIEKEILDELDKTNYPKTELAVQEETGR
                     TFELKLNHDEVKYICFKPS"
     gene            7514..7936
                     /locus_tag="O6Y56_002295"
     CDS             7514..7936
                     /locus_tag="O6Y56_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDB5575535.1"
                     /translation="MSNSQAIQAIENVLATSKVGVLSTAYNNKPNSRYMVFYNDGLTL
                     YTKTNIHSAKVKEIKDNPAAYVLLGYNDTTNRSFVEMEATIEIVTEQEVIDWLWETQD
                     KSFFSSKEDPELCVLRVVPQSIKLMNDKSLETPIKIDL"
BASE COUNT         2830 a         1252 c         1179 g         2796 t
ORIGIN      
        1 tattagacaa tgtgttgaat atttcgcatg ttgtctatta taatatgtaa gtgggaataa
       61 acaatacaca atgttcatca atacgtttat taatagacaa atacacccac attgttcaat
      121 aacacaagga ggttgattta tttttgaaag aagataggcg aattagaaag acaaagtcct
      181 ccattaaaca agcgttcact aaattactac aagaaaaaga tttagaaaag attaccattc
      241 gcgacataac aacacgcgct gatatcaata gagggacatt ttacttacat tacgaggata
      301 aatatatgtt actcgcagat atggaagatg aatatatttc agaactaacg acatatactc
      361 aatttgattt gttacgcggt tcttcaattg aagacattgc gaatactttt gtaaataata
      421 tacttaaaaa tattttccag catattcatg ataatttaga gttttatcat actattttac
      481 aattggaacg cacgagtcaa ttagaattaa aaatcaacga acatattaaa aataatatgc
      541 aacgttatat tagtatcaat cattctatcg gaggcattcc agagatgtat ttttacagtt
      601 acgtttccgg agcaacaatt tcaattatta aatactgggt aatggacaaa cagcccattt
      661 cagttgatga attagctaaa catgtgcata atattgtttt taatggtcca ttaagaataa
      721 tggcagaaaa ccgcttgcat aaatcaaacc ttgattcact aacttaagta atactcgctt
      781 ttcctaaatc ctttagaaag gaactatata tcatgattac ttcattcaga cattctgaag
      841 atatagataa acatattata aaaacaccat tagatcacac agcgtcatgg attaatgtag
      901 tagaaccaga ccgagaagaa attgaaaatc ttatggaaca atataatata cctgaagact
      961 ttatacgtga ccctttggac tcagaagaaa gttcccgtat tgaatatgac gaagatactg
     1021 gttactcatt aatcattatt gatttaccta tcgtcaattc aactaatcgt agcgttctat
     1081 cttttgtaac gattccatta ggtattatta ttggcaacgg tattatcgta acagtttgtg
     1141 acgctgaaaa tgaattttta gaaaatttac ctaagcgtga tattaattta aaatttcaca
     1201 gcagatttgc attagaaatt ttaactacta ttgccgacca ttataatcgt aacttacgat
     1261 tacttaataa aagtagaatt cgtattgaga aagaactaaa aaataacatt actaacaaac
     1321 aacttttcaa attaatggaa gttgaaaaaa gtttagtata ctttttagct gccttaaaag
     1381 gtaacgatac aattattaaa aagttattcc gtttacctgc aattaaacgt tttgaagaag
     1441 atgaagaatt actagaagat ttaatcattg aaaataacca agccatcgaa acaacagaat
     1501 tacatcaacg tatcttagaa agtatcacaa catcatacgc ttccttatta tctaatgata
     1561 tgaatacgat tatgaagaca ttaacacttt tcacggtatt attaacgtta ccaacgctcg
     1621 tatttagttt cttcggtatg aatgtgccgt tgccaattga tgaccatagt tatatatctt
     1681 ggattattgt ggtaggtatt tcattaattc ttgtcgtaat tgttagtatt ttcttatggc
     1741 gaaaacagaa attataacta aattaaaagg tatgacagct taaagtttca tcctattgca
     1801 tttgcagtga ctgatacttt gattactgtc atacctcttt tttattctac aacttcttta
     1861 tttgcttttc ttttcgataa aattaaagta actgttatgg caacgatgaa tgatattgtc
     1921 ataccaacaa agtagtgtaa ccatcctgca tgtactggat tgattgaaat aaatccaggc
     1981 aatccagcag ttcctaatgc gattgcttta accttgaaga aagcaatata tgctgaagca
     2041 atacctgatc caacgatagc accaataaat ggatatctta gttttaagtt aacaccaaac
     2101 atagccggtt ctgtaatacc aagtaatgct gaaatacctg cggcagatgc cacacctttt
     2161 aactttttat tttgtttaat aataaagaac gctgcaattg ctgcaccacc ttgtgcaaca
     2221 ttagacattg tcgcaatcgg gaatataaat gatccacccg ttttagtggc atctgcaatt
     2281 aatgtcgttt ctacagctat aaagctatga tgcatacctg taataacaat cggagcatac
     2341 aataatccga atattaatcc accaattgca ccaccaaatt cataaagcca tgttaaacca
     2401 tctgataacc agtaacctaa ttgtcgagtg attggaccta caaatgaaaa tgttagaaat
     2461 gctgttataa aaatagataa caatggtgtt aacaaattat ctaacaccgt tggaataact
     2521 ttgcgtaacc ctttttcaat tgaggctaag atataagctg ctacaagcat aggtaacact
     2581 tgtccttgat aacctacttg attaatatgc agaccaaaaa catcccaata tggaatagcc
     2641 ttacctgctt caactgcttt tgggaaatcg tatgcgctca ttagcgatgg atgaaccagt
     2701 atcataccta atgcagcacc taaaaacgga ttgccaccaa aacgttttgc tgcactaaat
     2761 ccaattaaaa ttggtaataa tgtaaatggt gcattcgcaa aaacatttat catttcagct
     2821 aatccagcaa attgactata tacatctatc aatgatttac ctgaaaagaa taaatctttc
     2881 gcagtcaaaa tgttatttaa ccccattaat aaaccaccag caacgatggc tggtatgatc
     2941 ggaacaaaga tatctgaaag catttttaca aatcgctgta acggattcat atttttagca
     3001 gattgtgctt tgacttccga agtggttgat gcttcttttc cagttaattt ttccagttca
     3061 ctaaatactt tattgactgt accagaccca ataataattt ggtattgtcc cccagtagaa
     3121 aatgtccctt taactacatc catattgttt agcgcctctt catttactaa actttcatca
     3181 tttaaaacta atcgtagtct cgttgcacaa tgcgccattg catctaaatt ctcttctccg
     3241 cctatcgcgt tcaaaatatc ttctgcggat tgcttataat tcatatagtt agcctcctaa
     3301 ttagaaccgg ttccatttat tccattttat tgtaaccggt tccaaaaata tttgcaacac
     3361 tctattatca ttttatataa acacttacat cacttttgat agcgcattca tttttattgc
     3421 tatactacat gcatgtatat taacattaat tatcggaggt aattttatga aagaacgtgg
     3481 ctatatcgaa cagctttggc gtgaagaaaa atatcatgta ttgttacaca gtcaacaggc
     3541 ttaccaaatg ataaggaatg ctttaaaaac ggatttatca cttcatcaag tccaacaaat
     3601 gattgatgat gctttgttaa ttgaaccgag tataggaagt gtatgtaatg cttttgatca
     3661 tatgtgggga tattttaaaa aatgtgcgaa tgaagaagaa agacaacaat caaaactact
     3721 taaagctgat tttattaatg gtaaaatcga cacccaaact ttattagatt ttttagcaga
     3781 acttgctaat aaatatgatg ttcaatattt actacaaagt cgtgttttaa acacaaaaag
     3841 aaagagatag attgaaactt tagttgtaac ggacaaatag tagtcattgg agttcagcaa
     3901 ttcatacttt gtactaaagt ttactataat ctatctctca aggtttaaat gtacatatct
     3961 atattaaaat gcgtttcttg atgttagaag ataccataca catttaatta gttacagcat
     4021 aaatcaattt atacccttaa ttattacatt gtttatattt taaattcggg ggagtaattt
     4081 taagtaatat cttgttgctg ctaattctat tgttaataaa ttgatattag atgtagaaat
     4141 tgagtgtgaa agttaataat agatgattta gctagtaaca taattaattc atatatagtc
     4201 aaaaagttct gttagatact gttcttgatg aatattcttt gatgttaggt gttagctatt
     4261 ctagatgagt ttcttagatg tggatgcctg tcttgatgaa gttatctatg atgttaatat
     4321 aatacttgat gttgattctt agatgttagt gcgatttcaa gatgctgatt ctttgttgtt
     4381 gcactatctt ggtgacgttt ctagttgttt atagttatcg catctcttga tgtaaaatct
     4441 aagatgttta tgcatttcta gatgttaatt cttcgctgct taagaattat cttgatggta
     4501 aatctagttg tgccatgcat tttctcatga tgaatctaag gtgttaattc attgatgtgt
     4561 gctgtttctt gttgcttcat tatcttgatg gtgaatttcg ttgtctaatg cactttttca
     4621 aatgattatt ctaattgtta cggcaataac tagatggatt ttcttagatg ttcacttttc
     4681 tagatgttta tacttatctt gatgttttct aaacagaact tttaaacgct ttatttttta
     4741 gtagattgtt taaaatttct tagttgatgg ttattgttgt tgatttgaat aatttgtagc
     4801 gaatattttg taacagggct actaagaatt tttataacaa gaagtgattt caatcgtact
     4861 aattttcagc gtttgatgac aaaagtgtat gtccaaactt aaataatggc gataaaattt
     4921 aagtcatggg tacatttaat gttttttgat tcaaacttcc attttggtca atttgctttt
     4981 tttataacat agttgaatat caataaaaga ttagcaagtt agttcaaaat ggctatgtat
     5041 tgttttttga aatacatagg tttgaaatct atattaatta tgcaccaaat aatttaatta
     5101 gactctatcg aaaatttcca aattttgctt actatctttc taattttact tttatattgt
     5161 gcacaatgca taaaaacaag cgttttccta ggagttttca ttaatttctt ttatttttca
     5221 ctattacctt ttcaaaaata ttcaactata ataggtatac tatccatgat tttaaaaatt
     5281 tccatgtttt acatttaaat gatagatttc aatatatatt aggcaggaga gagaaatatg
     5341 acatgccaac ttaaaataca tcatacatta tcgacaatac caagtcgtaa tattaataat
     5401 attatggtgc tattttcact tacaagtaaa ctcaatatta cgattaatgg tgaaaccaaa
     5461 gacgtaagta attatattat cttaattaac catggtgata tttataatat taaccacggc
     5521 gaaaatataa tcgaattaat gatacccgtt ttttattttt atcaacaaga tgatgatttc
     5581 tttaatggtt atttagatcg tcatttatta caatcaagta attatattaa gtcattaatt
     5641 gccgatttaa tcagtacacc aacaagttct tctttaatgg ggaaaaatat aggtcaaagt
     5701 attatagaca ctttacttaa agaagctttt ataagaatag atcatgaata tttaccaaat
     5761 attgctttaa gcaatccggt gtttatagac tgtgtaaact atattcatga caatattgat
     5821 gcgcacttgt ctttaaaaga tatagcgatg cattgcaaca tctctgaatc atattgttct
     5881 aatctttttg ttcgatattt gagtatgaat tttaaagatt attttacaag tattaaactt
     5941 gttaacgcca tcaatttatt actttctaca aaacattcta ttacaactgt ttctgaattg
     6001 gccggtttta acagtcatac aaattttgca aatcaattta agaattactt gcattttagt
     6061 cctaaacagt tccgttcact cgtttccaag attactgaac caccacaaat acacttccaa
     6121 caagataacg tatcacaatt cactgagtta atttcaacaa tcgatttaac agctcagctg
     6181 gctacaaata caacagatat tcatatagat gattttaatc cgaaagatcg aagtcagcgt
     6241 gccaaagtat ttgttcgatt tagtaatttc aatgaactat ttcaatttat tttcaatgaa
     6301 tattacgata ttaactttga gcacttacca aaacctgtcg ttttcattga cgatattcac
     6361 gatattgaga ttagccaaac gaattacaac ctgttaaata gatgttttga aaagcttttc
     6421 gaaaaaaata taggtttagc aatcgctatt aaatcaacgc aacaattcga aacgatgaag
     6481 caattaatac taacattttt acaaggcaac caagactata agacaagcaa aaaattagtt
     6541 aaatttatgc tcgtattttg ctctaattct atgacagcag aagaaattca tttatgtcat
     6601 cttaaaatta aaaacaaaaa caaagaaatt aaatatagtg tgacagtcga tggtttttta
     6661 gaaacttatt caaccgtgga acaagtttat gatgtcatgc agcgtcttaa attccattat
     6721 tactttattg atattgaaaa ttcaaaaact gcaacacatc ttatcactaa aaaccaacac
     6781 tatcatcaaa ctgacactca ttttgaacag tataagaaat ttattttaga ttcaggtata
     6841 tcatcaacac aattcgtata taataacctg tctgtaagcg gatttaaata tactaatgat
     6901 ggtaagaatc caattcaatt atctgacata gtgtatcact taatcgcatt attacgatat
     6961 ggcggtggta ttagctatca actattagat gaccattcaa attatatttc cttgtacaac
     7021 aaatatggta gtcccctacc attaatgcat ttatataaaa tgtttagacc ttttataaat
     7081 gaagatattg aaattactaa taattatgta ttgagtcgta aagataataa ttaccatttc
     7141 ttattattca ataaaattaa tgaccgatat atgtcagacg taaaacaaga cttcattttc
     7201 cataatgagt tacctcaaga ctctttgatg attattaaaa ctttgaatca tgaacatggt
     7261 tcaattcagc atttgcttcc aataagcgat caacttgttt atatagaaaa agaaatttta
     7321 gatgaattag acaaaacgaa ttaccctaaa acggagcttg cagttcaaga agaaactggt
     7381 cgtacatttg aactcaagtt aaatcacgac gaggttaaat atatttgctt taaacctagc
     7441 taaatactaa cagtcctctt gtgtttagtt tcttacgata aaggctattt atatcataag
     7501 gagatgatat aggatgagta actcacaagc aattcaagca attgaaaacg tgttagcaac
     7561 gtcaaaagtt ggtgtattat caactgcata taataacaaa cctaatagta gatatatggt
     7621 cttttataat gatggtctta ctttatatac taaaacgaat atccattctg ctaaggtcaa
     7681 agaaattaaa gataatccag cagcatatgt tttgttaggc tataacgaca caactaatcg
     7741 tagtttcgtt gagatggaag cgacaatcga aatcgttaca gaacaagaag tgattgattg
     7801 gctatgggaa acacaagaca aaagcttttt cagttcaaaa gaagacccag agttatgtgt
     7861 tttaagagta gttccgcaat ccattaagct aatgaatgat aaatcattag aaacacctat
     7921 taaaattgat ttataatatg taagttttta gttttaaaaa ttagccagca attgaacatg
     7981 ttagctataa atttcaacag tatcctattt atatatattt cgcttttgaa agcgtttaat
     8041 acttttaact atatttt
//
LOCUS       DALMNS010000113         7963 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.113, whole genome shotgun sequence.
ACCESSION   DALMNS010000113 DALMNS010000000
VERSION     DALMNS010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7963
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.113"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..511)
                     /locus_tag="O6Y56_002296"
     CDS             complement(<1..511)
                     /locus_tag="O6Y56_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HDB5575536.1"
                     /translation="MELQQAIANRRSVKKFKRDMHIDDALLYQAIEKAADAPNHGMRE
                     PWRVVHVPKDRLGDMSKDISKFAFPNELDKQQCHYDAVTKLGGMLLLILKTDPRQRQN
                     DENYFAFGAYAQNLMLLLYEAGIGTCWKSPLYIYDPKVRKTLGIKKDEVLAGFLYLTD
                     LEEDMPKAPR"
     gene            complement(594..1310)
                     /locus_tag="O6Y56_002297"
     CDS             complement(594..1310)
                     /locus_tag="O6Y56_002297"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HDB5575537.1"
                     /translation="MTHVEVVATIAPQLYIEETLIQKINHRIDAIDVLELRIDQIENV
                     TVNQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDLYLNLISDLANINGIDMID
                     IEWQADIDIEKHQRIITHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVK
                     LAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIG
                     EPQAPGQIDVTDLKAQVTLY"
     gene            1458..1880
                     /locus_tag="O6Y56_002298"
     CDS             1458..1880
                     /locus_tag="O6Y56_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organic hydroperoxide resistance protein"
                     /protein_id="HDB5575538.1"
                     /translation="MAIHYETKATNVGGRKGHVYTDDRALDIDIVPPAQADGKATNPE
                     QLFAAGYASCFNGAFDLILKQNKVRDAHPEVTLTVRLEDDPDSESPKLSVSIDATIKN
                     VISQEEAEKYLQMAHEFCPYSKATQGNINVDLNVNVVD"
     gene            2279..2773
                     /locus_tag="O6Y56_002299"
     CDS             2279..2773
                     /locus_tag="O6Y56_002299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDB5575539.1"
                     /translation="MIEIKTLTNNDFNEYKRLVSTVNEEFTQDSHYSQTMTDTLIHDI
                     LNQGSPKCIVFGCYENEALIATAALEQIRYVGKEHKSLIKYNFVTNNDKSINSELINF
                     IINYARQNNYESLLTSIVSNNIGAKVFYSALGFDILGFEKNAIKIGNTYFDEHWLFYD
                     LINK"
     gene            2929..3546
                     /locus_tag="O6Y56_002300"
     CDS             2929..3546
                     /locus_tag="O6Y56_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HDB5575540.1"
                     /translation="MVTAIIHGFILAIGLILPLGAQNVFIFNQGANQPKYRYVLPAII
                     TAGLSDSLLIIIAVVGVSIIIMSLPVLQAIIYIVGLIFLMYMAWTIWHDKPSTDGEAQ
                     IMSPMKQVSFALSVSLLNPHAILDTIGVIGSSAALYSGSNKIAFTIACISVSWLWFFL
                     LAILGKMVGSIDKTGKLLTIINKISSIIIIIVALMILQKLIQLLF"
     gene            complement(3619..4200)
                     /locus_tag="O6Y56_002301"
     CDS             complement(3619..4200)
                     /locus_tag="O6Y56_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001140698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDB5575541.1"
                     /translation="MAKTLYLMRHGQTLFNFKGLIQGFGDSPLTELGIAQAQKARSYY
                     ETKGINFDLYASSTQERASDTLENVAPNQSYQRFKGLKEWHFGLFEGESVYLFDNLYK
                     PEDLFGDRIVPFKGEARQQVEERIVKTLHDIMSQTKNNALVVSHGTIMGVFLRYCLKL
                     DEALKHNIGNCNILKFEYDNGTFKFVELIDPNL"
     gene            4424..4660
                     /locus_tag="O6Y56_002302"
     CDS             4424..4660
                     /locus_tag="O6Y56_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575542.1"
                     /translation="MDNHNQCNYVNPQNVSLDWECFIISKSEMLLDGVPNELINTWLD
                     KDIITPFSIRNDEINFKTKDIWDALIHHNWYYSN"
     gene            complement(4657..4860)
                     /locus_tag="O6Y56_002303"
     CDS             complement(4657..4860)
                     /locus_tag="O6Y56_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sterile alpha motif-like domain-containing
                     protein"
                     /protein_id="HDB5575543.1"
                     /translation="MTFYNFIMGFQNDNTPFGILAEHVSEDKAFPRLEERHQVIRAYV
                     MSNYTDHQLIETTNRAISLYMAN"
     gene            5201..5461
                     /locus_tag="O6Y56_002304"
     CDS             5201..5461
                     /locus_tag="O6Y56_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575544.1"
                     /translation="MNNILLNAINIVITTTFVIFNILITYNKDLDDLCWLLPGIIICG
                     VILIVSFTIAMITKNWLSEILFFINIVLVLYYIYPIFYSFIG"
     gene            5490..5678
                     /locus_tag="O6Y56_002305"
     CDS             5490..5678
                     /locus_tag="O6Y56_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575545.1"
                     /translation="MSLHFAILFWLALIFLVAATFILVLMKKTGKESKKESYLSFTVI
                     LYIFGFAILIYTFIFGVL"
     gene            5866..6435
                     /locus_tag="O6Y56_002306"
     CDS             5866..6435
                     /locus_tag="O6Y56_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575546.1"
                     /translation="MNYIKRTIILLILFVVVSPINSPKTIADNKYSEIQEDKFQLQPG
                     DIIITKGPVMWGFFGHCSIAIDDKTILQIEGPGDKPTTQSFESFKYNYASGKNDWVKV
                     YRCSYPGAGKKAADWVKKNYENTNHRYLVTLNLNSKKFTYCTKIIYQAYKFGVSEKSV
                     KSYGLHIISPYAIKDNFIDPYKLRLVKAY"
     gene            6523..6807
                     /locus_tag="O6Y56_002307"
     CDS             6523..6807
                     /locus_tag="O6Y56_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575547.1"
                     /translation="MNELTKEQKYTIAKFYKLYIERSNNGETEIVANFFGDAKDAREN
                     YFCDRDYQDFLTNCQILIQNKYLTGEVLDDNIYNISILNKTFIEFEQNFG"
     gene            6869..7087
                     /locus_tag="O6Y56_002308"
     CDS             6869..7087
                     /locus_tag="O6Y56_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575548.1"
                     /translation="MSEWHINNQSTKPFLIQQAEKQLTIVKPLPNGSFQILTEIDLEN
                     GNISNIDHSLLVSVDPKALEISIFDAVN"
     gene            complement(7586..7786)
                     /locus_tag="O6Y56_002309"
     CDS             complement(7586..7786)
                     /locus_tag="O6Y56_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001059082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDB5575549.1"
                     /translation="MNNGTVKWFNAEKGFGFIEREDGSDVFVHFSAIAEDGYKSLEEG
                     QKVEFDIVEGDRGEQAANVVKM"
BASE COUNT         2711 a         1250 c         1132 g         2870 t
ORIGIN      
        1 tacgtggtgc tttaggcata tcttcttcta aatccgttaa atataagaat ccagcaagaa
       61 cttcatcttt ctttatacca agtgtttttc ttactttagg atcatagata tataatggcg
      121 atttccaaca tgtacctatt cccgcttcat aaagtaacaa cataagattt tgtgcatatg
      181 caccaaatgc aaagtagttt tcatcatttt gacgttgtct tggatctgtt tttaaaataa
      241 gcaataacat gccacctagt ttcgttactg catcataatg acattgttgc ttatctaatt
      301 cattaggaaa tgcaaattta gaaatatcct tactcatatc tcctaatctg tctttcggaa
      361 catgcacaac tctccatggt tccctcattc cgtgatttgg agcatcagca gctttctcaa
      421 ttgcttgata tagcaatgcg tcatctatgt gcatatctct tttaaatttt ttcacacttc
      481 ttctattagc tattgcttgt tgtaattcca tctaaaatcg ctcctccacg aacaatgata
      541 atacttctca attataagac agcacttaca caaaagcaac ctaattcatt ttattagtat
      601 aaagtcactt gtgcttttaa atcagtaaca tcaatctgtc ctggagcttg tggttctccg
      661 atacaaccat aagtcaacgc accaccaaaa acgccttgag ccgttctact tattagtcca
      721 agtttagaca ttgaaatacc aacaactttg cagtccatag tatctgaaaa tgtagacatt
      781 gcctgcaata aatttaacac gtcattttta ttatgtggca ttactgctaa tttaacgtat
      841 tctggattga atttttgcat tttaaaaaat ataaattgca attcatctaa tggaggcgta
      901 ctttcgaaat tatgatgtga tataaccacc tctttattat attgttgcaa atgtgtaatg
      961 attcgttgat gtttttcaat gtcaatatct gcttgccatt ctatatcaat catatctata
     1021 ccattgatat ttgctaagtc tgatattaaa ttaagataca agtcatttgt aaattgccca
     1081 tagccacctt gtaactttgt acgatacgta actaataatt tgaatgaatc ttgcataacc
     1141 ttcagctttg taatcatttc tgccacttga ttaactgtga cattttcaat ttgatcaatt
     1201 cgtaattcta atacgtctat tgcatcaata cgatgattaa ttttttgaat taaagtttct
     1261 tcgatatata attgtggcgc gatagtcgct actacttcca catgtgtcat agtaaatccc
     1321 tcatttcaga tactcattat ttttattgta aacaacaact ttttatcctt caatcaaaca
     1381 atgctttaaa tgaaaatgat taaggtattt tcgaatgggt aaagcataaa tgtattttaa
     1441 attaggaggt tataagtatg gcaatacatt atgaaactaa agcgacgaat gttggcggac
     1501 gtaaaggaca tgtttatact gatgaccgag cattagatat tgatatagtt ccgcctgctc
     1561 aagcagatgg taaagctact aaccccgaac aattatttgc agcaggttat gcatcttgct
     1621 tcaacggtgc cttcgaccta attttaaagc aaaacaaagt gcgtgatgct catccagaag
     1681 taacactaac agtgagacta gaagatgatc cagactcaga aagtcctaaa ttaagtgttt
     1741 caattgatgc gacaattaaa aatgttatat ctcaagaaga agctgaaaaa tatttacaaa
     1801 tggctcatga attttgtcca tattcaaaag cgactcaagg aaatattaat gtcgatttaa
     1861 atgtaaatgt tgtagattag cattaactta aagagattat tcagcgttat taataaaatt
     1921 cacataaaat tcaaatttgc caaccaaaaa tttttggttg gttatttttt ctaatcgtga
     1981 ttgaaatttc tggcaatatt taactgaaaa tgattgtccc ttagtcatca taaatgtgac
     2041 cggttccaat cctggcttga cttcttcgca taccgtctac aaataaaagt cccgtgtcga
     2101 ccaataacca attccataat ttcctgaact taaaaataaa tataattaaa ttgataatcc
     2161 atttacaaga atgtgcatat aaatcaatga ttgcaaaatt ttaataaaca ttttaatatg
     2221 taattaagaa atttttttag tacaaaatct ttcttaataa tgattaagga ggtcagtaat
     2281 gattgaaatt aaaacattaa cgaataatga ttttaatgag tataagagac ttgtttcgac
     2341 agtcaatgaa gaattcactc aagattcaca ttatagtcaa acaatgactg acaccttaat
     2401 acatgacatt ttaaatcaag gttcaccgaa atgtattgta tttggctgtt atgaaaacga
     2461 agcacttatc gcaacagctg ccttagaaca aattcgatac gttggaaaag aacataaatc
     2521 attaattaaa tacaactttg ttactaataa cgataaatcg attaatagcg agctcattaa
     2581 tttcattatt aattatgcac ggcagaacaa ttacgaatct ttacttacat caattgtgtc
     2641 aaacaacata ggtgctaaag ttttctatag tgcactagga ttcgacattc ttggttttga
     2701 gaaaaatgca attaaaatcg gaaataccta tttcgatgaa cattggcttt tttatgattt
     2761 gattaataag taatacagtt ttatatattc tacatttctc ataaattcaa atcatatatt
     2821 aatctatttt tcatacaact actctactgt tgagtagttg ttttttattt gatatgatat
     2881 caataagttt tttcagaata ttctatgttt taggggtgtc aaaacttaat ggtaaccgca
     2941 attattcatg gatttatctt agcgattggt ctaattttac ctttaggtgc acaaaatgta
     3001 tttattttta accaaggagc taatcaacca aaatatagat atgtattgcc tgcaataatt
     3061 acagccgggt tgtcagacag cttacttatt attattgcag tggtaggagt atctatcatt
     3121 attatgtctt tacctgtact tcaagcaatt atttatatag ttggtttaat tttcttgatg
     3181 tatatggctt ggaccatttg gcatgataaa ccctcaacag atggagaagc tcaaattatg
     3241 tctccaatga aacaagtaag ttttgcttta tcagtttcat tactcaatcc acatgctatt
     3301 ttagatacaa ttggtgtaat tggtagtagt gctgcattat atagtggcag caataaaatt
     3361 gcgtttacaa tcgcttgtat tagcgtttca tggttatggt tctttttact cgcaatttta
     3421 ggaaaaatgg ttggatcaat tgataaaacc ggaaaattat taacaataat caataaaata
     3481 tcaagcataa taattattat tgttgctctg atgatattac aaaaacttat tcaattatta
     3541 ttctaaagcg ttatgtagtt gtattttaaa agcgttatac aaaagacata cttgtgtcta
     3601 tgtataacgc tttatttatt ataaatttgg atcaattaac tcaacaaatt taaatgttcc
     3661 attgtcatat tcaaatttca ggatattaca attaccgata ttatgcttta atgcttcatc
     3721 tagtttaagg caatatctta aaaatactcc cattattgtt ccatgactca cgactaatgc
     3781 attattcttt gtttgagaca taatgtcatg taaagttttc acaatgcgtt cttcaacttg
     3841 ttgccttgcc tctcctttga aaggaacaat tcgatctccg aataagtcct caggcttgta
     3901 tagattatca aatagataga ctgactcacc ttcaaataat ccaaaatgcc attccttcag
     3961 ccccttaaaa cgttgatacg attggttagg tgcaacattt tcaagtgtgt cacttgcgcg
     4021 ttcttgcgtt gatgatgcat ataaatcgaa gtttatcccc ttagtttcat aataactacg
     4081 tgccttttga gcttgagcaa ttccaagttc tgttagcggc gaatctccaa atccctgaat
     4141 tagtccctta aaattaaaca aagtttgtcc gtggcgcatc aaatataacg ttttagccaa
     4201 caataacacc tcttcaataa aaagtattga tagctcaaaa tgtattctct ttttattaaa
     4261 atgagtacca aatatattaa accattattt aaactttttc ggtagcgaaa acctttgctt
     4321 ttgatgtaca tttttttata agtaatgatg attttagttt aaaagataat gtgacggggt
     4381 aaaacgcaat gaagagtaca gaattttaaa ggagtgagta tttatggata atcataatca
     4441 atgtaattat gtgaatccac aaaatgtttc acttgactgg gaatgtttta taattagtaa
     4501 aagtgaaatg ttgttagatg gtgtaccaaa tgaacttata aacacttggt tagataaaga
     4561 cattattaca ccattttcga taagaaatga tgaaataaac tttaaaacaa aagatatttg
     4621 ggatgcacta atacatcata attggtacta ctcaaattaa tttgccatat ataagctaat
     4681 agctctattt gtagtttcaa ttaattgatg atctgtgtaa ttagacatca catatgctct
     4741 aattacttgg tgtctttctt ctaatcgagg gaatgcttta tcttcactaa cgtgttcggc
     4801 caatatacca aatggagtgt tatcattttg aaaacccatg atgaaattgt aaaacgtcat
     4861 aagatttgcc cccttcattt attaagcgct atttaaagtg ttattattaa tcttatcaga
     4921 aaactagtat ttgtaaatgt gcaaaagtaa ttttgcacat ttttttgtta tctgattcta
     4981 aaaatattaa cgaattgtac aactttaaga gtttttagta tgtaaatatt cttttcatat
     5041 taatactata cacccctata tatgctcgct tgtttgaatt aataaacttt agcattctac
     5101 agataatatt ttaaaaataa ctatactttt tatttaccta ttggaaaata gtgttatcat
     5161 atttgttaag aagctatttt tatactagta ggtgtcagtc atgaataaca ttttgttaaa
     5221 tgctatcaat atagttatta ctaccacttt tgttatcttt aatattttaa tcacatataa
     5281 taaagattta gatgatttat gttggctcct gcctggtatt atcatttgtg gtgtgatact
     5341 catcgtatcc tttaccattg caatgataac taaaaactgg ttaagtgaaa tattattttt
     5401 tataaatatc gtactcgttc tctattacat ttatcctatt ttttatagtt ttataggtta
     5461 gtaattacgg tatataagga gggtttcaaa tgtctttaca ttttgcaatt ctgttttggc
     5521 tagcattaat tttcttagtt gccgctacgt ttatactcgt attaatgaaa aaaactggca
     5581 aagaatctaa aaaagagtcc tatttaagtt tcactgtcat tctctatata ttcggattcg
     5641 ctatattaat atacacattt atatttggtg tgctataaat gaaattcatt ttatatccag
     5701 tctgaaacgt ctcaaagatg ttttagactg ttttttattc ttaatagaca tttcacactc
     5761 tcatacttta atatttaaga tatgttttag tcttacatgc ttattaaaga ttacaattct
     5821 aatttaagac tatttacata tatttcttca gcaaggagct tttaagtgaa ctatattaaa
     5881 cgaacgataa ttttacttat attattcgtt gtcgtatccc ctataaactc accaaaaaca
     5941 attgcagata ataagtattc agaaattcaa gaagacaaat tccaattaca acctggtgat
     6001 attattatta caaaaggccc tgtcatgtgg ggattttttg gtcattgtag tatcgcgatt
     6061 gatgataaaa cgattttaca aattgagggg cctggcgaca aaccaactac acaatccttc
     6121 gaatctttta aatataatta tgcaagtggc aaaaatgatt gggtgaaagt ttatcgttgc
     6181 agctatcctg gtgcaggtaa aaaagcggct gactgggtta agaaaaacta tgaaaataca
     6241 aatcatcgtt atctagttac attaaatttg aacagcaaaa aatttacgta ttgtactaaa
     6301 attatctatc aagcttataa atttggtgta agtgaaaaat cagttaaaag ttatggacta
     6361 catattattt caccctatgc aattaaagat aattttatag atccatacaa actaaggctt
     6421 gttaaagctt attaatacag tttcatcaaa tagttaaatt agtttgtgtt ttgcaataaa
     6481 ttgggtatag attacaaatg gtatttcagg aggcccaata ttttgaatga actaactaaa
     6541 gaacaaaagt atacaatagc taaattttac aaattatata ttgaacgttc gaataatgga
     6601 gaaacagaaa tagtcgctaa cttttttggc gatgctaaag atgcacgtga aaactatttt
     6661 tgcgatcgtg attatcaaga cttcttaact aactgccaaa ttttaattca aaacaaatac
     6721 ttaactggtg aagttttgga cgataacatt tacaatattt ctattttaaa caagacattt
     6781 attgaatttg aacaaaattt tggttgaaca tgaatgtctc aactataaac tttctaaccc
     6841 tattttaaag caggagtgaa aaacatacat gagtgaatgg catattaata atcaatctac
     6901 aaaacctttt ttaatacaac aagcggaaaa gcaattgact attgttaaac cgttgcctaa
     6961 tggtagcttc cagatactca cagaaataga tttggagaat ggcaatatta gtaacatcga
     7021 tcattctcta cttgtttcag tagaccccaa agcattagaa ataagtatat ttgacgctgt
     7081 aaattaaacg caatattttc atttaattat tttaatgttt cgccttttaa atgaaaacaa
     7141 gattactgaa ttattatgag attttaaaaa caataaatat tctcaataat taatcagtct
     7201 taataaaaaa ttaacaaaaa gttgattagt taaattatta attaagtagt aagatattat
     7261 gcgatgtggt atcctattat tgttaaacat tttgagtgtt taacattact tcttgttatc
     7321 gccatataca gactttaatt ctcgtcatta ttaaagttct gtattggcgc tttttttata
     7381 ttcaaaatca aaaaatcgga caaatgaaaa gtaaaaaact ttttatatca gttcgattta
     7441 ttttagaacc attatatatt gttagatttc cacctaaatt tattggacaa aaaaataaca
     7501 gctagtgctt ttaccacacc aactgctatc gatttaaagc ataaaaaaac agccctataa
     7561 taaggactgt ttgaataagt taaaattaca ttttaactac gtttgcagct tgctcgccac
     7621 ggtcgccttc aacgatgtcg aattcaactt tttggccttc ttctaatgat ttgtatccat
     7681 cttcagcgat tgctgagaag tgtacgaata cgtcgctacc atcttctctt tcgatgaaac
     7741 caaaaccttt ttctgcatta aaccatttaa ctgtaccgtt attcatattg aatacctccg
     7801 tcgtgctttt gcactaaata ttttgtaaca aattcataaa tgaaaaggag aatattctat
     7861 ataaataact cacatttttc ttcacgctct ttattactta actttcatta tacactttta
     7921 aatatagaag taaagcatta ttttattttc tgtgataata cac
//
LOCUS       DALMNS010000114         7862 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.114, whole genome shotgun sequence.
ACCESSION   DALMNS010000114 DALMNS010000000
VERSION     DALMNS010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7862)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7862)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7862
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.114"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..123
                     /locus_tag="O6Y56_002310"
     CDS             <1..123
                     /locus_tag="O6Y56_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000649608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Csa1 family protein"
                     /protein_id="HDB5575550.1"
                     /translation="KGDGDLKGSSIGHKNLEFSFVTSKEENIYFTDSINFKPTE"
     gene            233..1018
                     /locus_tag="O6Y56_002311"
     CDS             233..1018
                     /locus_tag="O6Y56_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDB5575551.1"
                     /translation="MMHSKKLMLGICLVLLIILIVGYVIMTKINSRSAQIKDTFNQTL
                     KLYPTKNLEDFYDKEGFRDEEFEKGDKGTWIIYSEMVIEPKGKNMETRGMVLYINRNT
                     RTTKGNFIVNEITDDNDGRPIDNKKKYPVKMEHNKIIPTKPIKDEELKKEIENFKFFV
                     QYGNFKDFKDYKNGDISYNPNVPSYSAKYQLSNDDYNVQQLRKRYDIPTKKAPELLLK
                     GDGDLKGSSIGSKDLEFIFVQNKRENIYFTDSVEFTPSEDDKS"
     gene            1276..2070
                     /locus_tag="O6Y56_002312"
     CDS             1276..2070
                     /locus_tag="O6Y56_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDB5575552.1"
                     /translation="MIHSKKLTLGICLVLLIILIGGCIIMTKINSRNAQIKDTFNQTL
                     NVYPTKNLDDFYDKEGFRDQEFDKRDKGTWIINSGMYIQLKGGALKSRAMVLYINRNT
                     RTAKGYFLISETTEDKKGYVHNKDKKYPVKMERNRIIPTKPITDEKLKKEIENFKFFV
                     QYGNFKDFKDYKDGDISYNPNVPSYSAKYQLNNDDYNVQQLRKRYDISTKRAPELKLR
                     GSGDLKGSSVGSKELEFNFVRNKEENVYFSDGINFKPTEEMNHEQN"
     gene            2057..3382
                     /locus_tag="O6Y56_002313"
     CDS             2057..3382
                     /locus_tag="O6Y56_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001619610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575553.1"
                     /translation="MNKTKYQINSDNIKSNSEETSAISSISYEIENANNNDLNNASIQ
                     TQIEILKSQNSFPKNLSYLKSYTDPKTGTTTSAFLNKDTGKVTLGMTGTNVHKDAILK
                     QTFGVPSYQGYIDASETLKDIGADVNIGLHSVTDKDPHYKNTQYFIKNIKKDYDIDII
                     TGHSLGGRDAMILGMSNDIKHIVVYNPAPLAIKDVSGLYADQEELKKLIEKYDGHIVR
                     FVSDEDELDAGVRNHLYETAGEKIVLKNGEGHAMSGILMSRTQAIILAELNKVKGYQD
                     ENNKALKSVRKQTRHRLHKVETLRANWIQTTGGSLSSSQQQLLEALTALTIAEGLNQL
                     VNEESQHLKKMYHAMAHKFGDNWKKAQEVGNEIGEKITSEEVIDELRKGGAYESKLET
                     DPKRKIDDKIKKLNDVYKNCNGYIAKIKQSIEAIVSNDQMLASQIDGMM"
     gene            3382..3708
                     /locus_tag="O6Y56_002314"
     CDS             3382..3708
                     /locus_tag="O6Y56_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575554.1"
                     /translation="MFTTYKNINELENAYDEERKQLNDAFNQIDELRHQTRKKCEQMY
                     DHFLYLKHKMNYSEDAMIRMTRIIESFDRETNQRIRHHEMKLEDYKDELRREYLKQSD
                     RIEGDE"
     gene            3711..3998
                     /locus_tag="O6Y56_002315"
     CDS             3711..3998
                     /locus_tag="O6Y56_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575555.1"
                     /translation="MGLDFSGLPDLAVLEQMKEKEQISEVIAPEHVRMHHDHQNKLKS
                     DEKILLDQMVSHFKKFEDDFKNAAQGAWVKNATDELKDISNDLEKIQDIKV"
     gene            4315..4422
                     /locus_tag="O6Y56_002316"
                     /pseudo
     CDS             4315..4422
                     /locus_tag="O6Y56_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000649608.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Csa1 family protein"
     gene            4534..5328
                     /locus_tag="O6Y56_002317"
     CDS             4534..5328
                     /locus_tag="O6Y56_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001826866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDB5575556.1"
                     /translation="MIHSKRLKLCLCLMILSVFISACGMKKEESSKDKQIKENFNKTL
                     SLYPTKNLEDFYDKEGFRDEEFEKGDKGTWIIHSKMIIETNNSNMESRGMVLYINRNT
                     RTTKGNFVVREITEDSKGYSHSKDTKYPVKIEHNRIISTKPIADDKLRKEIEDVKFFV
                     QYGDFKDINDYKDGDIAYNPNVPSYSAEYQLNNNDYNVKQLRKRYNIPTNKAPKLLLK
                     GDGDLKGSSIGSKNLEFTFVENKEENIYFTDSVEFTPSEDTRYESN"
     gene            complement(5332..5454)
                     /locus_tag="O6Y56_002318"
     CDS             complement(5332..5454)
                     /locus_tag="O6Y56_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575557.1"
                     /translation="MSYIIKFTFKFFEMTTYISQFTLDIELVSSELLVILPGFI"
     gene            5889..6080
                     /locus_tag="O6Y56_002319"
     CDS             5889..6080
                     /locus_tag="O6Y56_002319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575558.1"
                     /translation="MRKEIEALIFSDVSSYDIYVNTGVNQGLIGDIKDGYLTIDSMPY
                     IDAERLYHFAMERKSLVTN"
     gene            complement(6219..6404)
                     /locus_tag="O6Y56_002320"
     CDS             complement(6219..6404)
                     /locus_tag="O6Y56_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575559.1"
                     /translation="MLYILITALNVILNKLKMKDSNIISFIYSRHDRILYVNLVGNRF
                     KNNISMTKATSNIGRGF"
     gene            complement(6340..6621)
                     /locus_tag="O6Y56_002321"
     CDS             complement(6340..6621)
                     /locus_tag="O6Y56_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDB5575560.1"
                     /translation="MTYHERVLALRAESKRTAFDFRFEDLFSKEEWLSMSLAERQKAE
                     KAFRHEVKNMDDVRMPFSSVHDAQVKLYNVVYSYNGIKRNFKQVENEGF"
     gene            6921..7616
                     /locus_tag="O6Y56_002322"
     CDS             6921..7616
                     /locus_tag="O6Y56_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDB5575561.1"
                     /translation="MTVLTDKVAVVTGAGSGIGEAIATLLHEEGAKVILAGRNKDKLQ
                     NVANQLAQDSVKVVPTDVTKKEEVDELIKIAQQTFGGLDIVINSAGQMLSSKITDYQV
                     DEWDSMIDANIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAV
                     HTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPTDRKKLEPQDIAEAVLYALTQP
                     KHVNVNEITVRPV"
BASE COUNT         3119 a         1044 c         1369 g         2330 t
ORIGIN      
        1 aaaggtgatg gtgatttaaa aggatcatct ataggacata aaaatttaga attttctttt
       61 gtaacaagta aagaagaaaa catctatttt acggatagta ttaatttcaa acctactgaa
      121 tagggttaat agaagtttga aatgaaaatt tcataaagtg ttaaaaaatt tttcgcttta
      181 gatgtgtaaa ttaaagattg agtcagtatt aaaaatataa ggtggagaaa tgatgatgca
      241 ttcaaagaaa ttaatgctcg gtatatgttt ggtattactc attatattga ttgtaggtta
      301 tgtcattatg acaaaaataa atagtcgaag cgcccaaatt aaagacacat ttaatcaaac
      361 attaaaatta tatccaacca aaaatcttga agacttttat gataaagaag gctttcgtga
      421 cgaagaattt gaaaaaggag ataaaggtac ttggatcatt tattctgaaa tggttatcga
      481 gccaaaaggg aaaaatatgg aaacgagagg aatggtgctt tatatcaatc gcaatactag
      541 gacaacaaaa ggtaatttta ttgtcaatga aattacagat gataacgatg gtagacccat
      601 tgataataaa aagaaatacc ctgtaaaaat ggaacataat aaaatcatac caacaaaacc
      661 tataaaagac gaggagttaa aaaaagaaat tgaaaacttc aagttttttg tacaatatgg
      721 caactttaaa gattttaaag attataaaaa tggggatatt tcatacaatc caaacgtacc
      781 aagttattcg gcaaaatatc aattaagtaa tgacgattat aatgtccaac aattaagaaa
      841 aagatatgat ataccgacta aaaaagcacc agaactattg ttgaaaggtg atggcgattt
      901 aaaaggttca tccataggct ctaaagactt agaatttatc tttgtacaaa ataaaagaga
      961 gaatatctat tttacagatt cggttgaatt tactccaagc gaggatgata aatcgtgagt
     1021 caaactgaat agggttaata gaagtttgga atgaaaattc cataaagcac taggtaaaag
     1081 attataacga taactcttaa aattaataat aaatcacaga aactttatct tttgatttaa
     1141 ttgttttata attctgataa gaagatttaa aatacaaaat aattacaatt aaattcattt
     1201 gttcaaaaca atttttcgtt ttagttgtaa atattaaaaa ctgagtcaga attataaata
     1261 taaggtggag aaatgatgat tcattcaaaa aaattaacgc tcggtatatg tttggtatta
     1321 ctcattatat tgattggagg ttgtatcatt atgacaaaaa taaatagtcg aaacgcccaa
     1381 attaaagaca catttaatca aacattaaat gtgtatccaa ccaagaatct tgatgatttt
     1441 tacgataagg aaggctttcg agatcaagaa tttgataaaa gagataaagg gacttggatt
     1501 attaattctg gaatgtacat ccaattaaaa ggaggagcct taaaatccag agcgatggta
     1561 ctttacatca atcgtaacac tagaacagct aagggatatt ttttaataag tgagacaaca
     1621 gaagacaaaa aaggatacgt tcataataaa gataaaaaat accctgtcaa gatggaacgt
     1681 aatcgaataa ttccaacgaa gcccataacg gacgagaagt taaaaaaaga gattgaaaac
     1741 tttaagttct ttgtacaata tgggaatttt aaagatttta aagattataa agatggggat
     1801 atttcataca atcctaacgt accaagttat tccgcaaagt atcaattgaa taatgatgat
     1861 tataatgtcc aacaattaag aaaacgatat gatatatcaa ccaaaagggc acctgaatta
     1921 aaattgagag gatctggcga tttaaaaggc tcatccgtag gttctaaaga actagaattt
     1981 aactttgtaa gaaataaaga ggaaaatgtg tatttttctg atggtattaa tttcaaacct
     2041 actgaggaaa tgaatcatga acaaaactaa atatcaaata aattctgaca atataaagag
     2101 taactctgaa gaaacaagcg caatatctag tataagttat gaaatagaaa acgcaaataa
     2161 taacgattta aataatgcaa gtattcaaac gcaaatagaa atattaaaat cacaaaatag
     2221 tttccctaaa aatctttcat atcttaaaag ttatacggac cccaaaacag gtacgactac
     2281 aagcgccttt ttaaataaag acactggcaa agttacttta ggtatgacag gtactaatgt
     2341 acacaaagac gcaatattaa aacaaacatt tggtgttcct tcttatcaag gatatataga
     2401 tgcgagtgaa acgctaaagg atattggggc cgatgtcaat attggccttc attccgtcac
     2461 agataaagat ccacattata aaaataccca atactttatc aaaaatatca aaaaagacta
     2521 tgatattgat attattaccg gacattcgct gggcggtaga gatgcgatga ttttaggtat
     2581 gagtaatgat attaaacata tcgttgtgta taatccagct ccattagcga tcaaagatgt
     2641 gagcggcctt tatgccgatc aagaagaact taaaaaattg attgaaaagt acgatggtca
     2701 cattgtaaga tttgtgtctg atgaagacga attagatgca ggtgtccgca atcatttata
     2761 tgaaactgct ggagaaaaaa tagtacttaa aaatggagaa ggccatgcaa tgagtggtat
     2821 tttaatgagc agaacacagg ctataatctt agctgaatta aacaaagtta aaggctacca
     2881 agacgaaaat aataaagcat taaaatccgt tcgtaaacaa acgaggcata gattacataa
     2941 agtagagacg ttaagagcga attggattca aacaacgggt ggatcactct cttcctccca
     3001 acaacaatta ttagaagctt taacagcact aaccattgcc gaaggcttaa atcaattagt
     3061 gaatgaagaa agccaacatt tgaaaaaaat gtatcacgcg atggcacata aatttggaga
     3121 caactggaaa aaagcgcaag aagttggaaa tgaaattggt gaaaaaataa cctctgaaga
     3181 ggttatagat gaattaagaa aaggtggcgc gtatgaaagt aaacttgaaa cagatcccaa
     3241 aagaaaaatt gatgataaga taaagaaatt aaatgatgtt tataaaaatt gtaatggcta
     3301 tatcgcaaaa attaaacaga gtatcgaagc aattgtttct aatgaccaaa tgttagcgag
     3361 ccagattgat gggatgatgt aatgtttact acgtataaaa atattaatga acttgaaaat
     3421 gcctatgatg aagaaagaaa acaattgaat gatgcattca atcaaattga tgaattaaga
     3481 catcaaacac gcaagaaatg tgaacaaatg tatgatcatt tcttatatct caaacataaa
     3541 atgaattata gtgaagacgc tatgatcagg atgacacgta ttatagaatc tttcgataga
     3601 gaaacgaatc aacgtatccg acatcacgaa atgaaattag aagattataa agatgagtta
     3661 agaagagaat atctaaaaca atctgacaga attgaaggag atgaataagc gtgggacttg
     3721 attttagtgg tttaccagat ttagcagtat tggaacaaat gaaggaaaaa gaacagatta
     3781 gtgaggttat tgcgcctgaa catgttcgta tgcatcatga tcatcaaaat aagctgaaaa
     3841 gtgatgagaa aatattactt gaccaaatgg taagtcattt caaaaaattt gaagatgatt
     3901 ttaaaaatgc ggcacaaggg gcttgggtga aaaatgccac agacgaatta aaagatatta
     3961 gtaatgattt agaaaaaatt caagatatta aagtataaaa aggtattaat aaacacaata
     4021 actatataat ccatttaata ataaatgaat tatatagttc ataatttcga ctataagtgg
     4081 ctattagcca ttatttttcg ggatctatgt caaatcggac taatgaattc aataatggaa
     4141 gttaagcaac caatctttgt ttaacttctt ttttattttt tggaaaataa agttttgaac
     4201 ataataaaat ttgattatgt tttaacgaat tttgatgttt cttgaactat atatcatcta
     4261 gtcgtcattt acaattggta aatatgactt caaactgtat gaaggtgatg gcgattaaaa
     4321 ggctcatccg taggttctaa agaactagaa tttaacttta taagaaataa agaagaaaat
     4381 gtgtattttt ctgatagtat taatttcaaa cctactgaat agagttaata gaagtttgaa
     4441 atgaaaattt cataaagtgt tcaaaataat ttttcgcttt agttgtataa attaaagatt
     4501 gaatcagtat taaaaatata aggtggagaa atgatgattc attcaaaaag gttaaaattg
     4561 tgtctatgct tgatgatact atctgttttt attagcgctt gcggaatgaa aaaagaagaa
     4621 agtagtaaag ataaacaaat taaagaaaac ttcaacaaaa cgttgagctt gtatccaacc
     4681 aaaaatcttg aagactttta tgataaagaa ggctttcgtg acgaagagtt tgaaaagggt
     4741 gacaaaggca cttggataat tcactctaaa atgattattg agacaaataa tagcaatatg
     4801 gaatctagag gaatggtgct ctatataaat cgtaatacta gaacaacgaa aggtaatttt
     4861 gttgttagag aaataaccga ggatagtaaa gggtattcac atagtaaaga tacaaaatat
     4921 ccagtgaaaa tcgaacataa tagaatcatt tcaaccaaac cgatagctga tgataaatta
     4981 agaaaagaaa ttgaagacgt taagtttttt gtacaatacg gtgactttaa agatattaat
     5041 gattataaag atggtgacat tgcatataat ccaaatgtac ctagttattc agcagaatat
     5101 caattgaata acaatgacta caatgtgaag caacttcgaa aaagatataa tattccaacc
     5161 aacaaagctc cgaaactatt attgaaaggt gatggtgatt taaaaggttc atcaatagga
     5221 tcaaaaaatc tagaatttac ctttgtagaa aataaagaag aaaacatcta ttttacagat
     5281 tcagttgaat ttactccaag tgaggataca aggtatgagt caaactgaat atcaaataaa
     5341 acctggtaat ataacaagta actctgaaga aacaagttcg atatctaaag tgaactgtga
     5401 aatataggta gtcatttcaa aaaatttaaa ggtgaatttg ataatgtagc tcaaggggat
     5461 tgggttaaaa aggcgaagaa tgaactggat gatattagta agaagttaaa aaatattcaa
     5521 aaaacggaaa tttaatattc tagctgattc cagaagctaa gacagcatgc gttcattcat
     5581 gccattatta atataatcac cacaacaaaa aagcttctaa tgtgatattg gaacctcaaa
     5641 ttccgtatca tgttagaagc ttttaatgtc taaagaacac ctacatttta tcatattttc
     5701 ttacttatta aacttttata taattaacta tttcttaatt ttccaaaata gtgataaatt
     5761 tgtgaaatac atcacaaacc cctttattta tttggaaatt catgtaatat tagtcttgta
     5821 agaagttaat aaatagagag agacgagaga gtttatataa ataatatata aacattggag
     5881 tgatgattat gagaaaagag attgaagcgc ttattttctc agacgtaagt agctatgata
     5941 tttacgtgaa cactggtgta aaccaaggat taattggtga catcaaagat ggttacttaa
     6001 ctattgattc tatgccttac attgatgctg agcgtttgta tcactttgct atggaacgta
     6061 aatcgttagt cactaactag ttcttattgc caatgattac tacccctagt cggcggcaat
     6121 tgaagtgtga ttgatgtaac ttgccctcgt tggtgagcaa ttgagggcag acccctttaa
     6181 ttaagtaaac cctaactccc cacaaatctg gaacgatact aaaagccacg tcctatattg
     6241 gatgtggctt tagtcatgct tatattattt ttaaaacgat tacctacaag atttacatat
     6301 aaaattctat catgtctgct atatataaac gaaatgatat tagaatcctt cattttcaac
     6361 ttgtttaaaa ttacgtttaa tgccgttata agaatataca acattatata attttacttg
     6421 ggcgtcatgg acacttgaga agggcattct tacatcgtcc atatttttaa cttcgtgtcg
     6481 aaatgctttt tcagcttttt gtctttctgc aagcgacata cttagccatt cttctttgct
     6541 aaataaatcc tcaaatctaa aatcaaatgc agttctttta ctttctgctc tcagtgctaa
     6601 cacacgctca tgatatgtca caataactcc cccttttcta acagccttgc cattgtttac
     6661 taatacttat aactttagta ctaactttcg acttttacaa taaagaagtg acaatttttc
     6721 aacattttta aaaatgaaaa atatgaacaa cgatcatttg tatatttcga ataacttaaa
     6781 aatgtacttt atcagcagaa ataaatcgag ttagtataac cagcatatga attgtgatac
     6841 gctttttaaa agtataaata gtaatatgta cttatgattt accctgaaaa aataaaaaag
     6901 aatcaaagga gtcgatcatt atgacagtat taacagataa agtagcagta gttacaggtg
     6961 caggtagtgg tattggagaa gcaattgcaa ctttgctaca tgaagaaggt gcgaaagtca
     7021 tcttagccgg tagaaataaa gataaactac aaaatgtggc gaatcaatta gctcaagata
     7081 gtgtgaaggt agtgccaaca gatgtaacga aaaaagaaga agtcgatgaa ttgataaaaa
     7141 ttgcacaaca aacattcggt ggtttggata ttgttatcaa tagtgcgggg caaatgttat
     7201 cgtctaagat tactgattat caagtagatg agtgggatag tatgattgat gcgaatatca
     7261 aaggcacttt atacacggca caggctgcat taccaactat gttagaacaa tcaagtggcc
     7321 atcttattaa cattgcatct atttctggct ttgaagtaac gaaaagcagt acgatttata
     7381 gtgcgacgaa agcagcagtt cacactatta ctcaaggatt agaaaaagag ttggcaaaga
     7441 caggcgttaa agtaacaagc atttctccag gaatggtaga tacagcaata actgccgcat
     7501 acaatccaac agatcgtaaa aaacttgaac cacaagatat tgcagaagca gtattatatg
     7561 cattaacaca accaaagcac gttaacgtga atgaaattac agtgcgtcct gtataaaaag
     7621 gtgtttgagg tgtgggagat agacatttaa tgtaatagct atcggttttg ttaatattag
     7681 taaggcaata atgatataaa agcatgatag gaaattattc cttgcataat tctcagtaac
     7741 tggtgatttt aacaatcgag tgagtgaagg cgacgatatt agtgttatga tttataatct
     7801 ataatgttca taattacaga actataaaaa ctttttcatt tttcaccaca ttttaggaat
     7861 tg
//
LOCUS       DALMNS010000115         7666 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.115, whole genome shotgun sequence.
ACCESSION   DALMNS010000115 DALMNS010000000
VERSION     DALMNS010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7666
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.115"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..1073
                     /locus_tag="O6Y56_002323"
     CDS             <1..1073
                     /locus_tag="O6Y56_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDB5575562.1"
                     /translation="SFIVLILLFFIINDETNWIYDGGFYLISILTLFIIASVVHPSTW
                     IAKIFSNPVLVFIGKRSYSLYLWHFAVISFVHSYYVDGQIPVYVYFIDISLTIIFAEL
                     SYRFIETPFRKEGIKALNWRPSYIPQFIRMAIVVTLLIPFMLILVGAFNKYGKDIIGE
                     KANSFDTTIEDNYLMRIAPIDNIHIDGLVSEKKKESSDVYNNIKPLLIGDSVMVDIGE
                     SFKSSVPKSRIDGKVGRQLYQTLPLVKANYSQYKKSSDQVVLELGTNGDFTVKQLDDL
                     LNQFGKAKIYLVNTRVPRIYEANVNRLLADAAKRKSNVTLIDWYKRSQGHSEYFAPDG
                     VHLEYKGVLALKDEILKALKKK"
     gene            1276..3885
                     /gene="clpB"
                     /locus_tag="O6Y56_002324"
     CDS             1276..3885
                     /gene="clpB"
                     /locus_tag="O6Y56_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HDB5575563.1"
                     /translation="MDINKMTYAVQSALQQAVELSQQHKLQNIEIEAILSAALNESES
                     LYKSILERANIEVDQLNKAYEDKLNTYASVEGDNIQYGQYISQQANQLITKAESYMKE
                     YEDEYISMEHILRSAMDIDQTTKHYINNKVEVIKEIIKKVRGGNHVTSQNPEVNYEAL
                     AKYGRDLVEEVRQGKMDPVIGRDEEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGL
                     AQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFI
                     DEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQK
                     VAVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDL
                     VDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNESDNASKQRLQELQEELANE
                     KEKQAALQSRVESEKEKIANLQGKRAQLDESRQALEDAQTNNNLEKAAELQYGTIPQL
                     EKELRELEDNFQDEQGEDTDRMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHL
                     SDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAA
                     SLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDE
                     VEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLENVKETGEIT
                     EPTEKAVMTSLNAYFKPEILNRMDDIVLFKPLSIDDMSMIVDKILTQLNIRLLEQRIS
                     IEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQIETPLARMMIKEGFPEGTTIKVNLNS
                     DNNLTFNVEKIHE"
     gene            complement(3944..4813)
                     /locus_tag="O6Y56_002325"
     CDS             complement(3944..4813)
                     /locus_tag="O6Y56_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDB5575564.1"
                     /translation="MNLDWYYTFVILAKTLNYRLASEEINLTIPSIHKQIKNLEQHLN
                     VKLFETYKNQIILTEDGHTFLPIAQSFIEQYESGIKHIQLKKTMFQSKLNVVVSSYIA
                     TFIMPKFLKSFFNEHPFIDVSLHVKNENIEKDINNHTYDIGISRNQPKLREVHSEKVC
                     EGKIVLIAPNKENNHLLTEASLFEKYKIISDNHPEYWSSLKNNILNIYEKAQFLSIND
                     VHTSIKLIEMNQGISFLPLYITTNSDYNISVINTKILQAPISFTYIYSKKEIPEILVF
                     IKSFKKYIANEQL"
     gene            4923..6068
                     /locus_tag="O6Y56_002326"
     CDS             4923..6068
                     /locus_tag="O6Y56_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDB5575565.1"
                     /translation="MIRIQDNTIRDGMQQSNVRKSLFIKKEVLKQINKLNINSVEVGM
                     CTTIEDEFNIHQFRDILSPEKELVVLTRLNEKEIKKIVKLKIHNLVVKILLPISDLHI
                     KEKLNFSNKYYIQKIKDCLEILKKDKKGVDICFEDATRTSREKLKEYMEIISKYQVRT
                     VTFADTVGCSTPLEYGDIFNYFVKKYSNIIFSAHCHNDLGLATANTLAAILNGAKQIE
                     TTFLGIGERAGNAPIEEIITILTKKQIESTEFTLPDVYKTSINISKILDFQISENKPI
                     IGENIFKHESGIHQDGTKKNINMYQYLVPSDLGLKNSQVVQFPISNISSKKILHNKFK
                     SIVNTEEIDENISFYKLVNKFSPEVAPEDTVDLLQIIKRRSKDGNFK"
     gene            6052..6693
                     /locus_tag="O6Y56_002327"
     CDS             6052..6693
                     /locus_tag="O6Y56_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HDB5575566.1"
                     /translation="MEILNDSVKSFEKLYLQLQDGFPVIVPTDTNYNLCSLPNNDLCI
                     DKIFEYKKRSKDKPLSLFIDKPEDWKLYGDNQNTEIVDKLVEIFWPGPLNIILKNKTS
                     YNYMLNNSDSIAIGCVQNKTMRRFISYINSPIAITSANISGTADDILITENEAIKHMG
                     ENVRYMLRSQNKTNYKTSSTIIKVTDNKIELLREGDIKFEEIKERLGTGIIYE"
     gene            6686..7666
                     /locus_tag="O6Y56_002328"
                     /pseudo
     CDS             6686..7666
                     /locus_tag="O6Y56_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499469.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         2919 a          936 c         1316 g         2495 t
ORIGIN      
        1 tatcatttat agtacttata ttattatttt tcattattaa tgatgagacg aattggatat
       61 atgatggtgg tttttattta atatccatat taacgttatt cattattgcc agtgtcgttc
      121 atccatctac atggatagcg aagatatttt caaatccagt gttagtattt atcgggaaaa
      181 ggtcttacag tttatattta tggcattttg cagtaattag tttcgtacat agttactatg
      241 tagacggaca gatacctgta tatgtgtact ttatagatat aagtttaaca attatatttg
      301 cagagctatc atatcgcttt atagaaactc catttagaaa agaaggtatt aaagctttaa
      361 attggcgacc ttcttatata ccacaattta taagaatggc aattgtagta accttgttaa
      421 ttccatttat gttgatttta gtaggtgcat tcaataaata tggtaaagac attataggag
      481 aaaaagcgaa tagctttgat accactattg aagataatta tttaatgcgg atagcaccaa
      541 ttgataacat tcacattgat ggcttagtaa gtgagaagaa aaaggaatct tccgacgtat
      601 ataataatat taaacctctt ttaatcggtg attcagtaat ggttgatatc ggtgagtcat
      661 ttaagtcatc agttcctaag tctagaattg atggaaaagt agggcgtcaa ttgtatcaaa
      721 ccttaccttt agttaaagcg aattattcac aatataaaaa atcatctgat caagtcgtat
      781 tagaattagg tacaaatggc gactttactg tcaaacagct cgacgattta cttaatcaat
      841 ttggaaaagc caagatttat ttagttaata cacgtgttcc aagaatttat gaggcaaatg
      901 taaatcgatt attagctgac gcggcgaaac gaaagtccaa tgtcacatta attgattggt
      961 ataagcgatc acaaggacat agtgaatatt ttgcaccaga cggtgtacat ttagagtaca
     1021 aaggagtcct agctttaaaa gatgaaatat taaaagcact taaaaagaaa taacatatgt
     1081 ttaataagtc tagttaatgt gtaacgtaac attagctaga tttttttaat tcaaaaattt
     1141 atttacaaat attaggaaat ttaagtgtaa aagagttgat aaatgattat attgggacta
     1201 taatataact aaggtcaaag aaagtcaaag tcaaaattgc aacttgacca actctacaaa
     1261 ttagaggtga aattaatgga tataaataaa atgacatatg cagttcaaag tgctttgcaa
     1321 caagcagttg aactgagtca gcaacataaa ttacaaaata tagaaattga ggcaatttta
     1381 agcgctgcct taaatgaaag tgaaagctta tataaaagta ttttagaacg agcaaatatt
     1441 gaggtagatc aattaaacaa agcttatgaa gacaaactaa acacctatgc atctgtagaa
     1501 ggtgacaata tacaatatgg tcaatatatt agccaacaag caaaccaatt gataactaag
     1561 gctgaatcat acatgaaaga atatgaagat gaatatattt caatggagca tattttacgt
     1621 tcggcaatgg acattgatca aacaacaaaa cattatataa ataataaagt agaagttatc
     1681 aaagaaatta ttaaaaaagt aagaggggga aatcacgtga catcacaaaa tccagaagtt
     1741 aattacgaag cattagctaa atatggccgc gacttagtag aagaagttag acaaggtaaa
     1801 atggatcctg ttataggaag agatgaagaa attcgaaata cgattcgtat tttaagtcgt
     1861 aaaactaaaa acaaccctgt gctcattggt gaacctggtg ttggtaaaac tgcaattgtt
     1921 gaaggattag cgcagcgtat agttaagaaa gatgtgccag aatcattatt agataaaact
     1981 gtttttgagt tagatttaag cgcattagta gcgggcgcta aatatcgtgg tgaatttgaa
     2041 gagagattaa aagcagtcct aaaagaagtt aaagagtctg atggtagaat tatattattt
     2101 attgatgaaa tccatatgct tgtaggtgct ggtaaaacag atggtgccat ggatgcaggc
     2161 aacatgctaa aaccaatgtt agcacgagga gagttacatt gtattggtgc aacaacttta
     2221 aatgaatatc gagaatatat tgaaaaagat tcggcattag agcgtcgttt ccaaaaagta
     2281 gcagttagtg agcctgatgt tgaagataca atttcaattt tacgtggttt aaaagaacga
     2341 tatgaagtgt atcatggtgt gcgtattcaa gatagagcct tagttgctgc cgctgaattg
     2401 tctgatcgtt acatcactga tcgtttttta ccagataaag cgattgattt agttgaccaa
     2461 gcatgtgcaa caattcgtac ggaaatggga tcaaatccaa ctgaattgga tcaagttaat
     2521 agacgtgtta tgcaattaga aattgaagaa agcgcactta aaaatgaatc tgacaatgcg
     2581 agcaaacaga gattacaaga actacaagaa gagcttgcca atgaaaaaga gaaacaagca
     2641 gcacttcaat ctcgtgtaga atcagaaaaa gaaaaaatag caaatttaca aggaaaacgt
     2701 gcgcaactag atgaaagtag acaagcgttg gaagatgcac aaacaaataa caatttagaa
     2761 aaagcagctg aactacaata tggaacaatt cctcaattgg aaaaagaact tagagaatta
     2821 gaggataatt tccaagatga gcaaggtgaa gatacagatc gaatgattcg tgaagttgta
     2881 acagacgaag aaattggcga tattgtcagc caatggacag gcataccagt ttcaaaatta
     2941 gttgaaacag aacgtgaaaa attacttcac ttaagtgata tcttgcataa acgtgttgta
     3001 ggccaagata aagcggttga cctggtttca gatgcagtag ttagagcaag agcaggtatt
     3061 aaagatccaa acagacctat tggtagtttc ttattcctag gtccaactgg ggtaggtaaa
     3121 actgaattag ctaaatcatt agctgcatca ttatttgatt ctgaaaaaca tatgattcgt
     3181 attgatatga gtgaatatat ggaaaaacat gcagtatcaa gattgatagg ggcacctcca
     3241 ggatatattg gacatgatga agggggtcaa ttaactgaag cggttcgtcg taatccatac
     3301 tcagttattt tattagatga ggttgaaaaa gcgcatactg acgtctttaa tgtattattg
     3361 caaattttag atgaaggccg tttaactgat tctaaaggac gtagcgttga ttttaaaaat
     3421 actattatta ttatgacaag taatattgga tctcaagttt tattagaaaa cgtaaaagag
     3481 actggtgaaa ttacagaacc aacagaaaaa gctgttatga caagtttaaa tgcatatttc
     3541 aaaccagaaa ttttgaatcg tatggatgac atcgtattat ttaaaccttt atctattgat
     3601 gacatgagta tgattgtaga caaaatatta acgcaattaa atataagatt actagaacaa
     3661 cgaatctcaa ttgaagtttc tgatgatgct aaagcttggc taggtcaaga ggcttatgaa
     3721 cctcaatacg gtgcaagacc attaaaacgt tttgtacaac gccaaattga aacaccatta
     3781 gcacgtatga tgattaaaga gggattccca gaaggtacaa ctattaaagt taatttaaat
     3841 tcagacaata acttaacgtt taatgttgaa aaaattcatg aataaaattg aaccaagaat
     3901 gtgatgatta atcgcattct tggtttttta gatttgaaat ttattataat tgttcattgg
     3961 caatatactt tttaaatgat ttaataaaca ccaatatttc tgggatttct tttttgctgt
     4021 atatatatgt aaatgaaata ggtgcttgta aaattttcgt gttaataacc gaaatattgt
     4081 aatcactatt tgttgttata taaagaggca ggaatgatat accttgattc atttcgatta
     4141 atttaattga agtatgcaca tcattgatag atagaaattg tgctttttca taaatattta
     4201 aaatattatt tttaagtgat gaccaatatt ctggatggtt atcacttatt attttgtatt
     4261 tttcaaataa agatgcctca gttagaagat gattattctc tttattggga gcaatcaata
     4321 caattttacc ttcgcatact ttttcagaat gaacttctct tagtttaggt tgatttctgc
     4381 taatcccgat gtcatacgta tgattattaa tatctttttc aatattttca tttttgacat
     4441 gaagagaaac atcgataaaa ggatgctcgt taaagaatga ttttaaaaat ttgggcataa
     4501 tgaatgtcgc gatatatgaa gacacgacaa catttaattt cgattgaaac atcgtttttt
     4561 taagttggat atgtttgatg ccactttcat attgttcaat aaaactttgc gcaattggaa
     4621 gaaatgtatg accatcttca gtcaagataa tttgattttt ataagtttca aatagtttca
     4681 cattgagatg ttgttctaaa tttttaattt gcttatgtat agaaggtata gtgagattaa
     4741 tttcttcact agctaatcga tagtttaacg tcttcgctaa aatgacaaat gtatagtacc
     4801 aatccaaatt catgaactta cctctttcaa aaaagttaat aattcattag ataatattta
     4861 atttttattg cataaaaata atattaatat tatatcagag gttatcgagg gggtgaagta
     4921 atatgattcg aattcaagat aatacaataa gggatggtat gcaacaaagt aatgttcgaa
     4981 aaagtctatt tataaaaaaa gaagtattga aacaaattaa caagttaaat ataaattctg
     5041 ttgaagtagg catgtgtact actatcgagg atgaatttaa tattcatcaa ttcagagaca
     5101 ttttaagccc tgaaaaagaa ttagtagtat tgactaggct taatgaaaaa gaaataaaaa
     5161 aaatagtcaa attgaaaatt cataatttag tggtaaaaat actattgcca atatctgact
     5221 tgcatataaa agaaaagctt aatttttcaa ataaatatta tattcagaaa atcaaagact
     5281 gcttggaaat attaaagaaa gataaaaaag gagtagatat ttgttttgaa gatgcaacaa
     5341 ggacttctag agaaaaattg aaagaataca tggaaattat ttcaaaatat caagttagaa
     5401 cagttacatt tgcggacact gtaggatgtt cgacaccatt agaatacgga gatattttta
     5461 attactttgt aaaaaaatat tctaacataa ttttttctgc tcattgtcat aacgatctag
     5521 ggttggctac tgcaaataca ttagctgcaa ttttaaatgg tgcaaagcaa atagaaacta
     5581 catttttggg aattggtgag agagcgggta atgctcctat tgaggaaata attactattt
     5641 tgacaaaaaa acaaatagaa agtacggaat tcactttacc cgacgtatat aaaactagta
     5701 ttaatatttc taaaattctc gattttcaaa tatcagaaaa caaacctata attggtgaaa
     5761 atatatttaa acatgaatca ggaattcatc aagatggtac taaaaaaaat ataaatatgt
     5821 atcaatattt agttcctagt gatttaggat tgaaaaattc acaagttgtt cagtttccaa
     5881 taagtaatat ttctagtaag aaaatcttgc acaataaatt taaatcaata gttaacactg
     5941 aagaaattga tgaaaatatt tctttctata aacttgtgaa caagttttca cctgaagtag
     6001 cacctgaaga tacagtggat ttacttcaga taataaaaag gaggagtaaa gatggaaatt
     6061 ttaaatgatt ctgtaaaaag ttttgaaaaa ctttatttac aattacaaga tggttttcca
     6121 gtgattgttc ctactgatac taattataat ttatgtagtt tacctaacaa cgatctttgt
     6181 atcgataaaa tatttgaata taaaaagcga tcgaaagata agccattatc attatttatt
     6241 gataagccag aggattggaa attgtatgga gataatcaaa atacggaaat agttgataaa
     6301 ctagttgaaa tattttggcc tggaccatta aatattattt taaaaaataa aacaagctat
     6361 aattatatgc tcaataattc agatagtata gctataggat gtgtacaaaa taaaacgatg
     6421 agaagattta tttcatatat taattcacct atagcaatta cttcagcaaa tatctctgga
     6481 actgccgatg atattttaat aactgaaaat gaagcaatta agcacatggg cgaaaatgta
     6541 agatatatgc taagaagtca aaataaaact aactataaaa catctagtac gattattaaa
     6601 gtgacagata ataaaattga attattaaga gaaggagata taaagtttga agaaataaaa
     6661 gaaagactag gtacaggtat tatttatgaa taagttaata cttgggattt atttataccg
     6721 aattttttca cgagcatact tttatttacc gtttttatta atttactttt tgattcaagg
     6781 ttattccata atacaattag aaatattaat ggcgtcttat ggtattgcag catttttatt
     6841 ctctctatac aaagagaagt gttttaaaat ttgtaactta aaagattcta ataaattagt
     6901 tgttagtgaa atattcaaaa tcatcggttt attgttgtta ttatatcaaa atcaatattt
     6961 aattttagta gtggcacaaa tattattagg gttaagttac tcaatgatgg cgggtgttga
     7021 tacagcaata attaaaagaa atataacaaa tgagaaatac gtacaaaata agtcaaatag
     7081 ctatatgttc ctatcattat taatttaagg gattataggt agttatcttt atggaataaa
     7141 tattaaatgg cctataataa tgactggtat attttcaatt ctaacaatta taattattcg
     7201 atgcacatta gttgaaaata gggaattaaa tttaatagga gaaacaaagg gaaagataaa
     7261 gaaatttcta ccggaagaga agttttggat attgcattat tcttttttaa gagcgttaat
     7321 attaggattt tttataggat ttattccaat taatatatat aatgatttaa aactgaataa
     7381 tttacaattt atttcagtat taacttgtta cacagttatg ggttttgtat cttcacgtta
     7441 tttaactaaa tacttgaact ataagtttgt gtcagaaatt tgtttagtaa tatttttaat
     7501 aatatataca tatcaaagtt tcatagcagt tactatttct atgatatttt taggtatttc
     7561 ttcagggtta actcgtccac aaactataaa taaactttct agcagtagta acttaagagt
     7621 gatgcttaat tatgcagaaa cgttatattt tatttttaat atcgca
//
LOCUS       DALMNS010000116         7223 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.116, whole genome shotgun sequence.
ACCESSION   DALMNS010000116 DALMNS010000000
VERSION     DALMNS010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7223
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.116"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            19..792
                     /locus_tag="O6Y56_002329"
     CDS             19..792
                     /locus_tag="O6Y56_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDB5575567.1"
                     /translation="MKAYKIFWLNLVAIIIISIVVSGGMFLAMKWEQIHLKDGLKKVL
                     STYPIKNLETLYEIDGHDNPHYENNDQDTWYIESSYSVVGSDELLKEDRMLLKVDKNT
                     HKITGEYDTTTNDRKNATDSTYKSYPVKVVNNKIIFTKDVKDPALKQKIENNQFLIQN
                     GDLTSILNSNDLKVTHDPTTDYYNLSGKLSNDNPSVKQLKRRYNIPKNASTKVELKGM
                     SDLKGSNHQDQKLYFYFSSPGKDQIIYKESLTYNKISEH"
     gene            complement(1090..3096)
                     /gene="ggt"
                     /locus_tag="O6Y56_002330"
     CDS             complement(1090..3096)
                     /gene="ggt"
                     /locus_tag="O6Y56_002330"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HDB5575568.1"
                     /translation="MVINLNDKQTQTSKEGLISVSHPLAAKIGKDVLDQGGNAMDAVI
                     AIQLALNVVEPFASGIGGGGYLLYYEQSTASITAFDARETAPAHVDKQFYLDDSGEYK
                     SFFDMTTHGKTVAVPAIPKLFDYIHKRYAKLSLEDLINPAIELAIEGHSANWATEKYS
                     RQQHARLTKYHETAQVFTHENQYWREGDWIVQPELGKTFQILREQGFNAFYKGDIAKQ
                     LVNVVKACGGTIALEDLANYDIQIKEPISATFKDYDIYSMGPSSSGGITVIQILKLLE
                     HIDLLSMGSRSVDYLHHLIQAMHLAYSDRAQYLADDNFHEVPVQSLIDDDYLKARSKL
                     IDSNKANIDIEHGVVSDCISHTDVEENHTETTHFCVIDKEGNIASFTTSIGMIYGSGI
                     TIPGYGVLLNTTMDGFDVVAGGINEIAPYKRPLSNMAPTIVMHHGKPILTVGAPGAIS
                     IIASVAQTLINVLVFGMDIQQAIDEPRIYSSHPNRIEWEPQFSQSTILALIARGHAME
                     HKPDAYIGDVHGLQVDPTTYEASGGSDDTREGTVMGGEVIEIRKQPLPYRQMYDNYIY
                     RVYLNGIQLPLYAEQVRWMHGKYWVDESIVRIIFPEVSAHIEDLRSYDIAGENYIDVA
                     WLARKKGYQVALKDDGLYLTDDTYTSVKRNTHAYYRYDRDSITR"
     gene            complement(3134..4909)
                     /locus_tag="O6Y56_002331"
     CDS             complement(3134..4909)
                     /locus_tag="O6Y56_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HDB5575569.1"
                     /translation="MKRIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKSERPTIH
                     FLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGD
                     PNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAP
                     LYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTL
                     DPIRSIAPSVYSINMNMYTRLLLLDENDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDY
                     FAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHKHINDIKILKDEDID
                     QLRKEKDKDDNSIYDKLIKAYNVKSLTTDGHKVNNKDGIYQIVKITTDQSMPREVNYL
                     THSSAGILSKKFVNQVNKEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKNAYQATF
                     QRNPGFNETEKGSYGPAKIKNITLKFNGDPNNALSELRNHSIDMLADVNQKHFDLIKS
                     DKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIKFYRGDKFKIAS
                     PITPLVDTGNEQRQDLEKVEKAINQ"
     gene            complement(4926..6089)
                     /locus_tag="O6Y56_002332"
     CDS             complement(4926..6089)
                     /locus_tag="O6Y56_002332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5575570.1"
                     /translation="MVKLTTKIASLKLFASYAIATYILVILTSALNLFKGYVADTFYI
                     AETLLIVLTIILIIILTTEQTWKHHDLWRRIVEVLLLLMALTGNVFTLLMFVSIRRYQ
                     RTSQIHSYNGWESFIRKTTRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNAL
                     LHGPSLAYPFGTDDFGRDLFTRVVVGTKLTFSISIISVVIAVIFGVLLGTIAGYFNHI
                     DNLIMRILDVVFAIPSLLLAVAIIASFGASIPNLIIALSIGNIPSFARTMRASVLEIK
                     RMEYVDAARITGENTWNIIWRYILPNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAP
                     DVAEWGNILRTGSNYLETHSNLAIVPGICIMFVVLAFNFIGDAVRDALDPRIH"
     gene            complement(6095..>7223)
                     /locus_tag="O6Y56_002333"
     CDS             complement(6095..>7223)
                     /locus_tag="O6Y56_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5575571.1"
                     /translation="SSTQIHKEALKIFKAQSSNTNSKNIEQAHFSTYFENVLFLKFIM
                     IKVILALPMFILLTIYLQPLVRYIFERIVMAVIVIIGVIVSVFTILYFSPLDAAYSIL
                     GQNATKAQIHQFNVLHHLNEPYFIQLWDTIKGVFTFDLGTTYKGNEVVTKAVGERIPI
                     TIIVAVLALIVALIIAIPIGIISAMKRNSWLDITLMIIALIGLSIPSFWQGLLFILAF
                     SLKLDILPPSYMPEHPISLILPVLVIGTSIAASITRMTRSSVLEVMRSDYVLTAYAKG
                     LSTTQVVIKHIMKNAIIPIVTLVGLLVAELLGGSAVTEQVFNINGIGRYIVQKQLIPD
                     IPAVMGGVVYISIVISLANLIIDIFYALIDPKLRSEINERK"
BASE COUNT         2335 a         1401 c         1111 g         2376 t
ORIGIN      
        1 aagaaatggt gggaatgtat gaaagcgtat aaaattttct ggttaaactt agtagcaatt
       61 attattattt caattgtagt cagtggcggt atgtttttgg caatgaagtg ggaacagatt
      121 catttgaaag atggccttaa aaaagtacta agtacatatc ctattaaaaa cttagaaacg
      181 ctttatgaaa ttgatggtca cgataatccc cattatgaaa ataatgatca agacacatgg
      241 tatatagaat cctcttattc agttgttgga tcagatgagc ttttaaaaga agaccgtatg
      301 ttgttaaagg tagataagaa cacacataaa ataactggtg aatatgacac aactacaaac
      361 gatagaaaaa atgctactga ctcgacatac aaaagttatc cagtaaaagt agttaataat
      421 aaaatcattt tcacaaaaga cgtaaaagat cccgcgctga aacaaaaaat cgaaaacaat
      481 caatttttga ttcaaaatgg tgatttaaca agcattttaa atagcaatga tttgaaagtc
      541 acacatgatc ctaccactga ttattataat ttatctggta agttgtcgaa cgataatcca
      601 agtgtcaaac aattaaaacg tagatataat attcccaaaa atgcatcaac aaaggtggaa
      661 ttaaagggaa tgagtgattt aaaaggcagt aatcatcaag atcagaaact ttatttttat
      721 ttttcaagtc ctggaaaaga ccaaattata tacaaagaaa gccttactta taataaaata
      781 agtgaacatt aatacttatg ctgtaattat agaaacatcc aaatcatcta ttaaaatcct
      841 atattataaa aacacctcac ataactcgtt caactgtacc aaaccacatc acgttagatt
      901 ttagactaac tattgtgatg tacatcaaaa acgaatttgt gaggcgttgt atattttaca
      961 aaggtgaata gcgtttcgta tagcatttcc aacattacta cactcaagcg tcacgctaaa
     1021 gttcgaaatc gaatcctttc attcaacaaa agcccatatc cactacaaac tccatatcaa
     1081 acgcataaac tatcttgtga tactatctcg atcatatcta tagtacgcat gtgtatttcg
     1141 cttcactgaa gtatatgtat catcagttaa gtataaaccg tcatccttca atgccacttg
     1201 ataacctttc tttcgtgcta accaggccac atctatataa ttttctccgg cgatatcata
     1261 acttctcaaa tcttcaatat gtgcactaac ttcagggaaa atgattctga caatactttc
     1321 atcaacccaa tatttgccat gcatccatcg cacttgttca gcatataatg gcaactgtat
     1381 gccattaaga tatacacgat atatataatt atcatacatt tgccgatatg gtaatggctg
     1441 ttttctaatc tctatcacct cgccacccat tacggtgcct tctctagtat catcactgcc
     1501 acccgaagct tcatacgttg ttgggtcaac ttgtagtcca tgtacatctc caatataggc
     1561 atctggttta tgttccattg catgtccacg tgcaatcaat gctaatattg tagattgtga
     1621 aaattgaggc tcccattcaa tgcgattagg atggctacta taaattctag gttcatctat
     1681 agcctgctga atatccatgc caaacactaa tacattgatt aatgtttgcg caacactggc
     1741 aatgatactt atagcaccag gtgcacctac tgttaatatt ggcttcccgt gatgcatcac
     1801 aatcgttgga gccatgttac ttagtggtcg tttataaggt gcaatttcat tgatcccacc
     1861 cgccacaaca tcaaaaccat ccattgtggt attcaataac acgccgtagc ctggaatcgt
     1921 gatacccgat ccgtaaatca taccgattga tgtcgtaaat gaagcaatat taccttcctt
     1981 atcaatcaca caaaaatgag ttgtttcggt atgattttct tcaacatctg tatgactaat
     2041 gcaatcagac acaacaccat gctctatatc aatatttgct ttattgctat caatgagctt
     2101 actgcgtgct tttaaataat cgtcatcaat taatgactgt acaggcacct catgaaaatt
     2161 atcatccgcc aagtattgcg cgcgatcact atatgctaaa tgcattgcct gtatcaaatg
     2221 atgcaagtaa tcgacagatc ttgaacccat tgatagtaaa tcgatgtgtt ctaataactt
     2281 caatatttga attaccgtga taccaccgga actagatgga cccattgaat aaatgtcata
     2341 gtctttaaat gtcgcactga ttggctcttt aatctgaatg tcataattgg ctaaatcctc
     2401 taaagcgatt gtcccaccac atgctttgac aacattgact aattgtttcg caatgtcacc
     2461 tttataaaat gcattaaacc cttgttctct taatatttga aatgtcttgc ctaattcggg
     2521 ttgtacaatc caatcacctt cgcgccaata ttgattttca tgcgtaaata cttgcgccgt
     2581 ttcgtgatac tttgtcaatc gtgcgtgttg ctggcgcgaa tatttttcag tagcccaatt
     2641 ggctgaatga ccttcaatgg ctagttcaat tgcaggatta attaaatctt ccaatgacaa
     2701 tttagcataa cgcttgtgaa tataatcaaa cagctttgga attgctggca cagcgacagt
     2761 tttaccatgt gtagtcatat caaaaaatga tttatattcg cctgaatcat ctagataaaa
     2821 ttgtttgtct acatgtgcag gggctgtctc acgcgcatca aacgcagtta tactggcagt
     2881 actttgctca taatatagca agtacccgcc gccaccaata cctgatgcaa atggttctac
     2941 cacattcaat gccagttgaa ttgcaatcac ggcatccatg gcgttgccac cttgatctaa
     3001 tacatcctta ccaattttag cggcaagagg atgtgatacg gaaattaacc cttctttaga
     3061 tgtttgtgtc tgtttgtcat ttaagttaat gaccatacta tatcctccta ctttctgtta
     3121 aatatttaaa acattattga ttaatggctt tttctacttt ttctaaatct tgacgttgct
     3181 cgttaccagt atcgacaagt ggtgtaatcg gtgaagcaat tttaaattta tcgccacgat
     3241 aaaacttaat aaattgatct tgatctatcg cattaactac tgcttgtctc aagtttggat
     3301 gcgtcttaaa tatacctttt ttaatattta gcattaaaaa gactgacttg cgtccatttt
     3361 tgcgaataat gcttaaattt ttatccgact taattaaatc aaaatgtttt tgattcacat
     3421 ctgccagcat atcaattgaa tgatttctga gttctgacaa tgcattattc ggatcaccat
     3481 taaacttcaa tgtaatattt ttaattttag ctggtccata actacctttt tctgtttcgt
     3541 tgaatcctgg attacgttga aacgttgctt gatatgcatt tttctgtgtc ataatgtatg
     3601 cgccacttgc ataaagcgca ttttttccat ctgaatttgc aggaattgta ctgctatccc
     3661 catatccttt tggatattct ttatttactt gattaacaaa ttttttagat aaaatgcctg
     3721 ccgaagagtg tgttaagtaa tttacctctc gaggcatcga ttgatctgtc gtaattttaa
     3781 caatttgata aataccgtct ttattattta ctttatgacc atctgtcgtt aacgatttga
     3841 cgttataagc tttaatcaac ttatcataga tggaattatc gtccttgtct ttctctttac
     3901 gcaactgatc gatgtcctca tcttttaata tcttgatgtc atttatatgc ttgtgcatat
     3961 tgtaagtatt attgttaggc acagactttt tatcacgtgc tctatctaaa gaaaacttaa
     4021 catcttcagc cgatacacgc tctccagtat tacgtgcttg tccattgacc actttcgcaa
     4081 aataatcatc atctcttaac aagaaataaa acgctttatt gtccttattc acagcataat
     4141 cacgacttaa cgaacctttc gttgttaagt ggtcattttc atctaataat aataaccttg
     4201 tgtacatatt catattaatt gaatatactg acggcgcaat tgaacgtatt ggatccaatg
     4261 taggaatttc accatcttgt tgtgtcatca caagtggccg cgtatctcgt tctctactat
     4321 tgttgtaatc aaattgttgc catattaatg cacgtgaatt tggcaatcca acactatttt
     4381 tatctaacac tttattgtca tatactaaat tcttttttga tccatataaa ggcgccatat
     4441 accctttatc aaatacaact tcatcttcaa tttgcttata tgtttgttta acatctgctt
     4501 cattttgagt agaagcttta tttaacaact ggtctacatg tttatctttc aataaactat
     4561 ttgatcctgt agaactaaat aatgccgtca tagcatagtt cgggtcaccg aatactgtca
     4621 tccagtcatc gatttggata tcataattgc cggcttgacg ttgtgtacga tagctaccat
     4681 aatctggttg gatattcatc ttcacgttaa atcctgcatt ttccaattga tctttgacga
     4741 tattcatatc attttcataa cttgcttgtc ctaggaaatg tatcgttggt cgctcgcttt
     4801 tcacttcaac tttcgatgac ttttgagcca cttctgattt cgtagggaca ccacaaccac
     4861 ttaataccaa cgctaaaact ataattgcga tactaatgat tcttttcaca tctatcccta
     4921 cctttttaat gaattcttgg atctagtgca tcacgcactg catcacctat aaaattaaat
     4981 gctaaaacga cgaacataat acaaatacca ggtacaatag ctaaattact gtgcgtttcc
     5041 aagtagttac taccggtacg taaaatgttg ccccattcag ctacatcagg tgcaacacca
     5101 agtcctagga aacttaaact acttgttgtt aatacaacca cacctatatt taatgaaaaa
     5161 cgtacaatca taggcgcaat cgcattcggt aaaatataac gccatatgat attccaagtg
     5221 ttttcaccag tgatacgtgc tgcatctaca tattccatgc gtttaatttc taaaacactg
     5281 gcacgcattg tccgtgcaaa tgatggtata ttaccgatac ttaaagcaat aattaaattt
     5341 ggaatacttg ctccaaatga tgcaataatt gccaccgcta acaataatga tggaattgca
     5401 aacactacat ctaaaattcg cattattaaa ttatcaatat gattaaaata acctgcgata
     5461 gtgcctagta acacaccaaa aataactgca ataactactg aaataattga aattgaaaat
     5521 gtcagtttcg ttccgacaac tacgcgtgta aataagtctc taccgaaatc atcagtacca
     5581 aacggatagg ctagactcgg tccatgtaac agtgcattga actgattttt agtagctaat
     5641 gtcgtatcaa atgtaaattg tgacacaatt gataatgtca gcatgtagac taaaataagt
     5701 aaaccgataa tcgcaatacg atgtctagta gtttttcgta taaacgattc ccacccgtta
     5761 taactatgta tttgcgatgt acgttggtaa cgtctaatac ttacaaacat taataatgta
     5821 aatacgttgc ctgttaatgc catcaacaat aacaacactt cgacgatacg tcgccatagg
     5881 tcatgatgct tccatgtttg ttccgttgtt aaaatgataa ttaaaatgat ggttaaaacg
     5941 attagcaatg tttcagcaat atagaacgta tcggccacat aacctttaaa aagatttaat
     6001 gcactcgtta atataactaa aatataagtt gcaatagcat aacttgcgaa tagttttaag
     6061 gaagctatct ttgttgtaag ttttaccata tgcctcactt cctttcgtta atttcactac
     6121 gtaattttgg atcgattaaa gcataaaata tatcaataat taagtttgct aaagatatta
     6181 caattgatat atatacgacc ccacccatga ctgctggaat atcaggtatt agttgttttt
     6241 ggacgatata acgaccgata ccattaatgt taaatacttg ttccgtcact gctgaaccgc
     6301 ctagtaactc tgccactaga agaccaacta gcgttacaat tggaataatg gcatttttca
     6361 taatatgttt aataactact tgtgtcgtcg ataatccttt tgcataagca gttaaaacat
     6421 aatcactgcg cattacttca agtacagaag accttgtcat acgcgtgata gaagcagcaa
     6481 tacttgttcc aatgacaagt acaggtaaaa tcaacgatat tggatgttct ggcatataag
     6541 atggtggcaa aatatccaat ttcaatgaga acgctaaaat gaataataac ccttgccaga
     6601 aacttggaat agataaacca attaatgcaa ttatcattaa cgtgatatca agccaactat
     6661 ttcgcttcat cgcactgata attccaattg gtattgcaat aattaatgcc acaattagcg
     6721 ctaatactgc gacaattatt gtaattggaa ttctttcgcc aactgcttta gtcacaacct
     6781 cattcccttt gtaagtcgta cctaagtcaa aagtaaaaac acccttgatg gtatcccaca
     6841 attgaataaa ataaggttcg ttaagatgat gtaatacatt gaattgatgt atctgtgcct
     6901 ttgttgcatt ttgtcccagt atgctataag ccgcatcaag cggtgaaaaa tacagaatgg
     6961 taaacacact gacaataaca ccaatgatga caatcacagc catgacaatt cgctcaaaaa
     7021 tatatctaac taatggctgt aaataaatag tcaataagat gaacatcggc aaggccaata
     7081 tcactttgat catgatgaac ttaagaaata atacattttc aaagtatgtt gaaaaatgtg
     7141 cttgttcaat attctttgaa ttcgtattag aactttgtgc cttgaatatt tttaatgctt
     7201 ctttatgtat ttgtgtggat gac
//
LOCUS       DALMNS010000117         7017 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.117, whole genome shotgun sequence.
ACCESSION   DALMNS010000117 DALMNS010000000
VERSION     DALMNS010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 7017)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7017)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7017
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.117"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            99..344
                     /gene="yaaA"
                     /locus_tag="O6Y56_002334"
     CDS             99..344
                     /gene="yaaA"
                     /locus_tag="O6Y56_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein YaaA"
                     /protein_id="HDB5575572.1"
                     /translation="MIILVQEVVVEGDINLGQFLKTEGIIESGGQAKWFLQDVEVLIN
                     GVRETRRGKKLEHQDRIDIPELPEDAGSFLIIHQGEQ"
     gene            341..1453
                     /gene="recF"
                     /locus_tag="O6Y56_002335"
     CDS             341..1453
                     /gene="recF"
                     /locus_tag="O6Y56_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HDB5575573.1"
                     /translation="MKLNTLQLENYRNYDEVTLKCHPDVNILIGENAQGKTNLLESIY
                     TLALAKSHRTSNDKELIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVKVNHLEQS
                     RLTQYIGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQK
                     NNYLKQLQLGQKKDLTMLEVLNQQFAEYAMKVTDKRAHFIQELESLAKPIHAGITNDK
                     EALSLNYLPSLKFDYTQNEAARLEDIMSILSDNMQREKERGISLFGPHRDDISFDVNG
                     MDAQTYGSQGQQRTTALSIKLAEIELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTI
                     QHKVQTFVTTTSVDGIDHEIMNNAKLYRINQGEIIK"
     gene            1463..3397
                     /gene="gyrB"
                     /locus_tag="O6Y56_002336"
     CDS             1463..3397
                     /gene="gyrB"
                     /locus_tag="O6Y56_002336"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDB5575574.1"
                     /translation="MVTALSDVNNTDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGL
                     HHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVI
                     LTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVPQF
                     DLKEVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLRDERD
                     EENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNSGYATN
                     LLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTAII
                     SIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA
                     RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSR
                     TQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDLAKARYHKIVIMTD
                     ADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLK
                     SELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD
                     VVENRRQFIEDNAVYANLDF"
     gene            3434..6094
                     /gene="gyrA"
                     /locus_tag="O6Y56_002337"
     CDS             3434..6094
                     /gene="gyrA"
                     /locus_tag="O6Y56_002337"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001561428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HDB5575575.1"
                     /translation="MAELPQSRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKP
                     VHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYP
                     LVDGQGNFGSMDGDGAAAMRYTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVL
                     PARFPNLLANGASGIAVGMATNIPPHNLTELINGVLSLSKNPDISIAELMEDIEGPDF
                     PTAGLILGKSGIRRAYETGRGSIQMRSRAVIEERGGGRQRIVVTEIPFQVNKARMIEK
                     IAELVRDKKIDGITDLRDETSLRTGVRVVIDVRKDANASVILNNLYKQTPLQTSFGVN
                     MIALVNGRPKLINLKEALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHID
                     EIISTIRESDTDKVAMESLQQRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLN
                     YISELEAILADEEVLLQLVRDELTEIRDRFGDERRTEIQLGGFEDLEDEDLIPEEQIV
                     ITLSHNNYIKRLPVSTYRAQNRGGRGVQGMNTLEEDFVSQLVTLSTHDHVLFFTNKGR
                     VYKLKGYEVPELSRQSKGIPVVNAIELENDEVISTMIAVKDLESEDNFLVFATKRGVV
                     KRSALSNFSRINRNGKIAISFREDDELIAVRLTSGQEDILIGTSHASLIRFPESTLRP
                     LGRTATGVKGITLREGDEVVGLDVAHANSVDEVLVVTENGYGKRTPVNDYRLSNRGGK
                     GIKTATITERNGNVVCITTVTGEEDLMIVTNAGVIIRLDVADISQNGRAAQGVRLIRL
                     GDDQFVSTVAKVKEDADEVNEDEQSTVSEDGTEQQREAVVNDETPGNAIHTEVIDSEE
                     NDEDGRIEVRQDFMDRVEEDIQQSSDEDEE"
     gene            complement(6182..6994)
                     /locus_tag="O6Y56_002338"
     CDS             complement(6182..6994)
                     /locus_tag="O6Y56_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002461649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HDB5575576.1"
                     /translation="METLNSINIPKRKEDSHKGDYGKILLIGGSANLGGAIMLAARAC
                     VFSGSGLITVATHPTNHSALHSRCPEAMVIDINDTKMLTKMIEMTDSILIGPGLGVDF
                     KGNNAITFLLQNIQPHQNLIVDGDAITIFSKLKPQLPTCRVIFTPHLKEWERLSGIPI
                     EEQTYERNREAVDRLGATVVLKKHGTEIFFKDEDFKLTIGSPAMATGGMGDTLAGMIT
                     SFVGQFDNLKEAVMSATYTHSFIGENLAKDMYVVPPSRLINEIPYAMKQLES"
BASE COUNT         2420 a         1083 c         1442 g         2072 t
ORIGIN      
        1 gaattaatta tttatatgta aacggtttct acctctattt taaatgaaat ttgtgacaaa
       61 aaaaggtata atatattaat gacatacaaa gaaatggagt gattattttg gttcaagaag
      121 ttgtagtaga aggagacatt aatttaggtc aatttctaaa aacagaaggg attattgaat
      181 ctggtggtca agcaaaatgg ttcttgcaag acgttgaagt attaattaat ggagtgcgtg
      241 aaacacgtcg cggtaaaaag ttagaacatc aagatcgtat agatatccca gaattacctg
      301 aagatgctgg ttctttctta atcattcatc aaggtgaaca atgaagttaa atacactcca
      361 attagaaaat tatcgtaact atgatgaggt tacgttgaaa tgtcatcctg acgtgaatat
      421 cctcattgga gaaaatgcac aaggaaagac aaatttactt gaatcaattt ataccttagc
      481 tttagcaaaa agtcatagaa cgagtaatga taaggaactc atacgtttta atgctgatta
      541 tgctaaaata gaaggtgagc ttagttatag acacggcacg atgccattaa caatgtttat
      601 aactaaaaaa ggtaaacaag tcaaagtgaa tcacttagag caaagtcgac taacccaata
      661 tattggacac ctcaatgtgg ttctatttgc gccagaagat ttgaatattg taaaaggctc
      721 tcctcaaata agacgacgct ttatagatat ggagttgggc caaatttctg ctgtttactt
      781 aaatgattta gctcaatacc aacgtatttt aaagcaaaag aataattact taaagcagtt
      841 acaattaggc caaaaaaagg acttaacaat gttggaagta ttaaatcagc agtttgctga
      901 atatgcaatg aaagtaactg ataaacgtgc acattttatt caagagctag agtcgttagc
      961 taaaccgatt catgctggta tcacaaatga taaagaagcg ttgtcgctga attatttacc
     1021 tagtcttaaa tttgattata ctcaaaatga agcggcacga cttgaagata ttatgtctat
     1081 tcttagcgat aatatgcaaa gagaaaaaga acgaggcatt agcttattcg gaccacatcg
     1141 agatgatata agttttgatg tgaatggcat ggatgctcaa acatatggtt ctcaaggaca
     1201 gcaacgtaca acggctttgt ccattaaatt agctgaaatt gagttaatga atatcgaagt
     1261 tggggaatat cccatcttat tattagacga tgtactcagt gaattagatg attcgcgtca
     1321 aacgcattta ttaagtacga ttcagcataa agtacaaaca tttgtcacta cgacatctgt
     1381 agatggtatt gatcatgaaa tcatgaataa cgctaaatta tatcgtatta atcaaggtga
     1441 aattataaag taacagaaag cgatggtgac tgcattgtca gatgtaaaca acacggataa
     1501 ttatggtgct gggcaaatac aagtattaga aggtttagaa gcagtacgta aaagaccagg
     1561 tatgtatata ggatcgactt cagagagagg tttgcaccat ttagtgtggg aaattgtcga
     1621 taatagtatc gatgaagcat tagctggtta tgcaaatcaa attgaagttg ttattgaaaa
     1681 agataactgg attaaagtaa cggataacgg acgtggtatc ccagttgata ttcaagaaaa
     1741 aatgggacgt ccagctgtcg aagttatttt aactgtttta catgctggtg gtaaatttgg
     1801 cggtggcgga tacaaagtat ctggtggttt acatggtgtt ggttcatcag ttgtaaacgc
     1861 attgtcacaa gacttagaag tatatgtaca cagaaatgag actatatatc atcaagcata
     1921 taaaaaaggt gtacctcaat ttgacttaaa agaagttggc acaactgata agacaggtac
     1981 tgtcattcgt tttaaagcag atggagaaat cttcacagag acaactgtat acaactatga
     2041 aacattacag caacgtatta gagagcttgc tttcttaaac aaaggaattc aaatcacatt
     2101 aagagatgaa cgtgatgaag aaaacgttag agaagactcc tatcactatg agggcggtat
     2161 taaatcttat gttgagttat tgaacgaaaa taaagaacct attcatgatg agccaattta
     2221 tattcatcaa tctaaagatg atattgaagt agaaattgcg attcaatata actcaggata
     2281 tgccacaaat cttttaactt acgcaaataa cattcatacg tacgaaggtg gtacgcatga
     2341 agacggattc aaacgtgcat taacgcgtgt cttaaatagt tatggtttaa gtagcaagat
     2401 tatgaaagaa gaaaaagata gactttctgg tgaagataca cgtgaaggta tgacagcaat
     2461 tatatctatc aaacatggtg atcctcaatt cgaaggtcaa acgaagacaa aattaggtaa
     2521 ttctgaagtg cgtcaagttg tagataaatt attctcagag cactttgaac gatttttata
     2581 tgaaaatcca caagtcgcac gtacagtggt tgaaaaaggt attatggcgg cacgtgcacg
     2641 tgttgctgcg aaaaaagcgc gtgaagtaac acgtcgtaaa tcagcgttag atgtagcaag
     2701 tctaccaggt aaattagccg attgctctag taaaagtcct gaagaatgtg agatattctt
     2761 agtcgaaggg gactctgccg gggggtctac aaaatctggt cgtgactcta gaacacaggc
     2821 gattttacca ttacgaggta agatattaaa tgttgaaaaa gcacgattag atagaatttt
     2881 gaataacaat gaaattcgtc aaatgatcac agcatttggt acaggaatcg gtggcgactt
     2941 tgatctagcg aaagcaagat atcacaaaat cgtcattatg actgatgccg atgtggatgg
     3001 agcgcatatt agaacattgt tattaacatt cttctatcga tttatgagac cgttaattga
     3061 agcaggctat gtgtatattg cacagccacc gttgtataaa ctgacacaag gtaaacaaaa
     3121 gtattatgta tacaatgata gggaacttga taaacttaaa tctgaattga atccaacacc
     3181 aaaatggtct attgcacgat acaaaggtct tggagaaatg aatgcagatc aattatggga
     3241 aacaacaatg aaccctgagc accgcgctct tttacaagta aaacttgaag atgcgattga
     3301 agcggaccaa acatttgaaa tgttaatggg tgacgttgta gaaaaccgta gacaatttat
     3361 agaagataat gcagtttatg caaacttaga cttctaagcg ctgtgaactg aacttttgaa
     3421 ggaggaactc ttgatggctg aattacctca atcaagaata aatgaacgaa atattaccag
     3481 tgaaatgcgt gaatcatttt tagattatgc gatgagtgtt atcgttgctc gtgcattgcc
     3541 agatgttcgt gacggtttaa aaccagtaca tcgtcgtata ctatatggat taaatgaaca
     3601 aggtatgaca ccggataaat catataaaaa atcagcacgt atcgttggtg acgtaatggg
     3661 taaatatcac cctcatggtg actcatctat ttatgaagca atggtacgta tggctcaaga
     3721 tttcagttat cgttatccgc ttgttgatgg ccaaggtaac tttggttcaa tggatggaga
     3781 tggcgcagca gcaatgcgtt atactgaagc gcgtatgact aaaatcacac ttgaactgtt
     3841 acgtgatatt aataaagata caatagattt tatcgataac tatgatggta atgaaagaga
     3901 gccgtcagtc ttacctgctc gattccctaa cttattagcc aatggtgcat caggtatcgc
     3961 ggtaggtatg gcaacgaata ttccaccaca taacttaaca gaattaatca atggtgtact
     4021 tagcttaagt aagaaccctg atatttcaat tgctgagtta atggaagata ttgaaggtcc
     4081 tgatttccca actgctggac ttattttagg taagagtggt attagacgtg catatgaaac
     4141 aggtcgtggt tcaattcaaa tgcgttctcg tgcagttatt gaagaacgtg gaggcggacg
     4201 tcaacgtatt gttgtcactg aaattccttt ccaagtgaat aaggctcgta tgattgaaaa
     4261 aattgcagag ctcgttcgtg acaagaaaat tgacggtatc actgatttac gtgatgaaac
     4321 aagtttacgt actggtgtgc gtgtcgttat tgatgtgcgt aaggatgcaa atgctagtgt
     4381 cattttaaat aacttataca aacaaacacc tcttcaaaca tcatttggtg tgaatatgat
     4441 tgcacttgta aacggtagac cgaagcttat taatttaaaa gaagcgttgg tacattattt
     4501 agagcatcaa aagacagttg ttagaagacg tacgcaatat aacttacgta aagctaaaga
     4561 tcgtgcccac attttagaag gattacgtat cgcacttgac catatcgatg aaattatttc
     4621 aacgattcgt gagtcagata cagataaagt tgcaatggaa agcttgcaac aacgcttcaa
     4681 actttctgaa aaacaagctc aagctatttt agacatgcgt ttaagacgtc taacaggttt
     4741 agagagagac aaaattgaag ctgaatataa tgagttatta aattatatta gtgaattaga
     4801 agcaatctta gctgatgaag aagtgttatt acagttagtt agagatgaat tgactgaaat
     4861 tagagatcgt ttcggtgatg agcgtcgtac agaaattcaa ttaggtggat ttgaagactt
     4921 agaggacgaa gacttaattc cagaagaaca aatagtaatt actttgagcc ataataacta
     4981 cattaaacgt ttgccggtat ctacatatcg tgctcaaaac cgtggtggtc gtggtgttca
     5041 aggtatgaat acattggaag aagattttgt cagtcaattg gtaactttaa gtacacatga
     5101 ccatgtattg ttctttacta acaaaggtcg tgtatacaaa ctaaaaggtt atgaagtgcc
     5161 tgagttatca agacagtcta aaggtattcc tgtagtgaat gctattgaac ttgaaaatga
     5221 tgaagtcatt agtacaatga ttgctgttaa agaccttgaa agtgaagaca acttcttagt
     5281 gtttgcaact aaacgtggtg tcgttaaacg ttcagcatta agtaacttct caagaataaa
     5341 tagaaatggt aagattgcga tttcgttcag agaagatgat gagttaattg cagttcgttt
     5401 aacaagtggt caagaagata tcttgattgg tacatcacat gcatcattaa ttcgattccc
     5461 tgaatcaaca ttacgtcctt taggccgtac agcaacgggt gtgaaaggta ttacacttcg
     5521 tgaaggtgac gaagttgtag ggcttgatgt agctcatgca aacagtgttg atgaagtatt
     5581 agtagttact gaaaatggtt atggtaaacg tacgccagtt aatgactatc gtttatcaaa
     5641 tcgtggtggt aaaggtatta aaacagctac gattactgag cgtaatggta atgttgtatg
     5701 tatcactaca gtaactggtg aagaagattt aatgattgtt actaatgccg gtgtcattat
     5761 tcgactagat gttgcagata tttctcaaaa tggtcgtgca gcacaaggtg ttcgcttaat
     5821 tcgcttaggc gatgatcaat ttgtttcaac ggttgctaaa gtaaaagaag atgcagatga
     5881 agtaaatgaa gatgaacaat ctactgtatc tgaagatggt actgaacaac aacgtgaagc
     5941 ggttgtaaat gatgaaacac caggaaatgc aattcatact gaagtgattg attcagaaga
     6001 aaatgatgaa gatggacgta ttgaagtaag acaagatttc atggatcgtg ttgaagaaga
     6061 tatacaacaa tcatcagatg aagatgaaga ataataaaaa aataagactt ccctatatgt
     6121 aggggagtct tatttttatg ctagaaagta atgctgtact atattcaatg attagtaatg
     6181 attaactttc taattgtttc attgcgtaag gtatttcatt gataagtctt gatggtggca
     6241 ccacatacat atcttttgca agattttcgc caataaaact atgtgtatat gtggcactca
     6301 taaccgcttc ttttaagtta tcaaattgac caacaaaact tgtaatcata ccagcaagtg
     6361 tatcgcccat accaccagtc gccattgctg ggctaccgat tgttaattta aagtcttcat
     6421 ctttaaagaa aatttcagta ccatgttttt taagtacaac agttgcgcct aaacgatcaa
     6481 ctgcttcacg attacgctca tatgtctgtt cctcaatagg aataccactt aatcgctccc
     6541 attctttgag atgcggagta aaaatcacgc gacatgtagg taattgcggt ttcagtttac
     6601 taaatattgt aatcgcatcg ccgtctacga ttaaattttg atgcggttgt atattttgta
     6661 gtaggaatgt aatggcatta tttcctttga aatcaacgcc aagacctgga ccaattagta
     6721 tactgtcagt catttcaatc attttcgtca acattttcgt atcattaata tcaataacca
     6781 tcgcttctgg gcaacgagaa tgtaatgctg aatgatttgt tggatgtgta gctacagtga
     6841 ttaaaccact accgctaaat acacatgcac gagccgctaa cataatggca ccacctaagt
     6901 tagcagatcc accaattaat aaaattttgc cataatcacc tttatgtgaa tcttctttac
     6961 gcttaggaat gttaatagaa tttaacgttt ccatagtgat ataacctccc atgtaaa
//
LOCUS       DALMNS010000118         6983 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.118, whole genome shotgun sequence.
ACCESSION   DALMNS010000118 DALMNS010000000
VERSION     DALMNS010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6983
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.118"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            24..1331
                     /locus_tag="O6Y56_002339"
     CDS             24..1331
                     /locus_tag="O6Y56_002339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HDB5575577.1"
                     /translation="MNKVHKPLYFYLMLFFSTTIIGALLLYLPFTGKKPISFLDALFI
                     ASSAFTVTGLSPVDIGSQFNILGEIVILLLIQIGGLGIVTVTLLTLVFLNRKISMKNR
                     FLIMVTWNIDEPGGVIKLIKHLAIYSLVTELIGMICLCLSFIPKFGIGKGLFLSLFTS
                     VSAFNNAGFALFKNNLIDYSSDPIVIITTSILIIFGGIGHFVVIDFINCKKLSKLSLH
                     SKLVLTTTSILIIIGAITFFLLEQFNTMQNMGLVEKIGNSFFQSVTTRTAGFNSIDIA
                     IINKSTALMLMLLMFIGGAPLSAAGGIKITTFAVAFIFVLNYIRKENNVSVFNKEISD
                     KHIKLSIVTINISFLFISIITFILSIINPNISLIKLLFEVVSAFGTVGLSMNLTTEYH
                     GITKIIIIFVMLCGKVGLLTLLRTFIPPKSPKNYRYTKGQIYL"
     gene            complement(1872..3488)
                     /gene="groL"
                     /locus_tag="O6Y56_002340"
     CDS             complement(1872..3488)
                     /gene="groL"
                     /locus_tag="O6Y56_002340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500736.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDB5575578.1"
                     /translation="MVKQLKFSEDARQAMLRGVDQLANAVKVTIGPKGRNVVLDKEFT
                     APLITNDGVTIAKEIELEDPYENMGANLVQEVANKTNEIAGDGTTTATVLAQAMIQEG
                     LKNVTSGANPVGLRQGIDKAVKVAVEALHENSQKVENKNEIAQVGAISAADEEIGRYI
                     SEAMEKVGNDGVITIEESNGLNTELEVVEGMQFDRGYQSPYMVTDSDKMVAELERPYI
                     LVTDKKISSFQDILPLLEQVVQSNRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKA
                     PGFGDRRKAMLEDLAILTGAQVITDDLGLDLKDASIDMLGTASKVEVTKDNTTVVDGD
                     GDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKL
                     RIEDALNSTRAAVEEGIVAGGGTALVNIYQKVSEIEAEGDIETGVNIVLKALTAPVRQ
                     IAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEAGIVDPTKVTRSALQHAASVA
                     AMFLTTEAVVASIPEKNNDQPNMGGMPGMM"
     gene            complement(3564..3848)
                     /gene="groES"
                     /locus_tag="O6Y56_002341"
     CDS             complement(3564..3848)
                     /gene="groES"
                     /locus_tag="O6Y56_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDB5575579.1"
                     /translation="MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGT
                     GRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE"
     gene            4023..4766
                     /locus_tag="O6Y56_002342"
     CDS             4023..4766
                     /locus_tag="O6Y56_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDB5575580.1"
                     /translation="MTRLWASLLTVIIYILSQFLPLLIVKKLPFVQYSGIELTKAVIY
                     IQLVLFLIAATTIILINLKIKNPTKLELEVKEHKKYIIPWALLGFALVMIYQMVVSIV
                     YTQIFGTQQTSPNTERLIVIARKIPLFIFFVSIVGPLLEEYVFRKVIFGELFNAIKGN
                     RIVAFAIATTVSSLIFALAHNDYKFIPIYFGMGVIFSLAYVWTKRLAVPIIIHMLQNG
                     FVVIFQLLNPEALKKATEQANFIYHIFIP"
     gene            complement(4791..5939)
                     /locus_tag="O6Y56_002343"
     CDS             complement(4791..5939)
                     /locus_tag="O6Y56_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575581.1"
                     /translation="MSYHWFTKMLLSTSILILSSSSLGLATDTVEAKDNLNGEKPTTN
                     LNHNVTSPSVNSEINNNETGTPPESNQTGNEGTDSNSRDANPDSNNVKPDSNNQNPSP
                     DSKPDPNNPNPVPNPKPDPDKPKPNPEPKPDPDNPKPKPDPKPDPDKPKPNPNPSPDP
                     NQPGDSNHSGGSKNGGTWNPNASDGSNQGQWQPNGNQGNSQNPTGNDFVSQRFLALAN
                     GAYKYNPYILNQINKLGKDYGEVTDEDIYNIIRKQNFSGNAYLNGLQQQSNYFRFQYF
                     NPLKSERYYRNLDEQVLALITGEIGSMPDLKKPEDKPDSKQRSFEPHEKDDFTVVKKQ
                     EDNKKSASTAYSKSWLAIVCSMMVVFSIMLFLFVKRNKKKNKNESQRR"
     gene            6136..6762
                     /locus_tag="O6Y56_002344"
     CDS             6136..6762
                     /locus_tag="O6Y56_002344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDB5575582.1"
                     /translation="MGLFKKDKKAMTFDNAMEERRSIYNLKDSISISDDELESMIAHA
                     VKHVPSSFNSQSTRIVLLLNDNNNKFWDNTKAILKEVMGENRDFEPTEQKIDNFKHSY
                     GTILFYEDQDVVSGLQEQMPNYYDNFAIWSTQTNAMHQFAIWTALATKGIGASLQHYN
                     PLVDEMTSNEFNIPKSWKLIAQMPFGDIREAAGEKSFNPVEDRFVIKK"
BASE COUNT         2191 a         1229 c         1038 g         2525 t
ORIGIN      
        1 atataaagga gtatgcaatt aaaatgaaca aagtccacaa acctttatat ttttatttaa
       61 tgctattctt ctctacaact atcataggtg cacttttatt gtatttacct ttcactggta
      121 aaaagccaat atctttttta gatgccctat ttatagcttc aagtgcattt acagttactg
      181 gcctatctcc agttgatata gggtcacagt ttaatatact tggtgaaata gtaatactat
      241 tattaattca aataggtggt ctgggtatcg tgaccgtaac cctattgaca ctagtatttt
      301 taaatagaaa gatatcaatg aaaaatagat tcttgattat ggttacatgg aatattgacg
      361 aacctggtgg tgttattaag ctaattaaac acttggctat ttatagttta gtcactgaat
      421 taattggtat gatttgtttg tgtttatctt ttataccaaa atttggtata ggcaaaggtt
      481 tatttttaag cttattcaca tcagtatcag cttttaataa tgctggattt gcccttttta
      541 agaataactt aatagattat tctagtgatc caattgtcat tattacaacc tcaatactca
      601 taatatttgg aggtattgga cattttgtcg taatagactt tattaattgt aaaaaattga
      661 gtaaattatc tttacattct aaattagtct taactacaac tagtatccta ataattatag
      721 gagctattac attcttttta ttagaacagt ttaatactat gcaaaatatg ggactagttg
      781 aaaaaatcgg aaattctttt ttccaatcag taacaacacg aacagcgggt tttaacagta
      841 tagatatagc aatcattaac aaatctaccg ccttaatgtt aatgctactt atgtttattg
      901 gtggtgcccc tctcagtgca gctggaggaa ttaaaataac tacttttgca gtagcgttta
      961 tatttgttct aaattatata cgtaaagaaa ataatgtttc agtattcaat aaagaaatat
     1021 ctgacaaaca tataaaacta tctattgtta ccattaatat ctcatttcta tttatcagta
     1081 tcattacttt tatattatcg ataattaatc cgaacatatc attaatcaag ttattattcg
     1141 aagtggtttc tgcatttgga acagtcgggt taagtatgaa ccttaccaca gaatatcatg
     1201 gtattactaa aataattatt atattcgtta tgctttgcgg taaagtagga ctattaactt
     1261 tattaagaac atttatacca ccaaaaagtc ctaaaaatta ccgctacact aaaggacaaa
     1321 tttatctata aaataaccat caatctttaa caagaaatga actagtgttt taatctatta
     1381 catttaaaaa actacctaaa caggtagttt tttgtttttc atctatttta ggcccattaa
     1441 atgtcttatc tctttaatta agtaaaatgc acaagtacac ctttaaaaag atctactcaa
     1501 aactaaacta tacctagtta accgcttgtg attaagaaat ttcaaatgtt atttctttta
     1561 attatgtcaa ccacccataa ggattttaat caagcactca ttcactcctg cactcgcaat
     1621 atgcattact tatagaagtt gatgtactct catattaagg gcaatacaat aactcccgca
     1681 ctacaatgat ttaaatacca ttatgaatct caataacaca tcagcacata ataaagacgc
     1741 ctctcataag tttagtcaac taaaggaagg cgtcttaaat taaaatattt tcatacgctc
     1801 taatatttat ttggaacgaa tcatactctt gcataatgta attttctagt tagtcaaaac
     1861 tagaaactgt tttacatcat tcctggcatg ccacccatgt taggttggtc attatttttt
     1921 tctggaattg atgctacaac cgcttcagtc gttaagaaca ttgctgcaac acttgcagca
     1981 tgttgtaatg ctgagcgtgt tactttagtt ggatcaacga tacctgcttc taacatatta
     2041 acccactcgt ttgtagcagc gttaaaacca acacccggct ctgcgttttt caaacgttct
     2101 acaataacag aaccttctaa tcctgcattt tcagcaattt ggcgaactgg tgcagttaat
     2161 gctttaagta caatattcac acctgtttca atgtcgcctt cagcttcaat ttcacttact
     2221 ttttggtaaa tatttactag tgcagtacca ccacctgcaa caataccttc ttcaactgct
     2281 gcacgtgtag agtttaaagc atcttcaata cgtaatttac gttctttaag ttctgtttca
     2341 cttgctgcac ctaccttgat aactgcaaca ccacctgcta atttagctaa gcgctcttgt
     2401 aatttttcac gatcaaagtc agattcagtt tcttcaattt gagatttcaa ttggcttaca
     2461 cgtgcatcaa tgctgttttc gtcaccgtca ccatcaacaa cagttgtatt atctttagtt
     2521 acttctactt tacttgcagt acctaacata tctattgatg catcttttaa atctagacct
     2581 aaatcatcag taatcacttg cgcaccagtt aaaatagcta aatcttctaa cattgcttta
     2641 cgacgatcac cgaaaccagg tgcttttact gcaacagctg taaatgtgcc acgcatacgg
     2701 ttaagcacga tatttgttaa tgcatcgcct tcgacttcat cagctacaat taagattgga
     2761 cgattagatt gaaccacttg ttctagtaaa ggtaagatat cttggaatga tgagattttc
     2821 ttatctgtca ctaaaatgta tgggcgttct aattcagcaa ccattttatc tgaatcagta
     2881 accatatacg gtgattgata accacgatca aattgcatac cttcaaccac ttcaagttca
     2941 gtgttcaagc catttgattc ttcaattgta atgacaccat cattgccaac tttttccata
     3001 gcttcagaaa tataacgtcc aatttcttca tctgctgcag aaatcgcacc tacttgcgca
     3061 atttcatttt tattttcaac tttttgagaa ttttcatgta acgcttcaac agcaacttta
     3121 actgctttat cgataccttg tcgtaaaccg actgggttcg caccgcttgt aacatttttc
     3181 aagccttctt gaatcattgc ttgagctaac actgttgcag ttgtcgtacc gtcaccagca
     3241 atttcatttg tcttatttgc gacttcttga actagattag cccccatatt ttcatatgga
     3301 tcttctaatt cgatttcttt agcaatcgtt acaccatcgt tcgtaattaa aggtgctgta
     3361 aactctttat ctaatacaac attacgtcct ttaggaccaa tcgttacttt aactgcattt
     3421 gctaattggt caacaccacg taacattgct tgacgtgcat cttcagagaa tttcaattgt
     3481 ttaaccataa atgataaacc tccatttgtt tagtcatatt tcattttcgt tctttacaat
     3541 ctatctatga attatattct atattattca attactgcta aaatatcttc ttcatttaat
     3601 actagatatg tttcattatc tcgtttaact tctgtaccag catattgttg gaacacgaca
     3661 cggtcccctt ctttcacttc aggagtcact cttgtaccat catttaatag acgtccagtt
     3721 cctactgcaa cgataacgcc ttcgtttgat ttttctttag cactatcagt taaaacaata
     3781 ccacttttag ttgtttgttc ttgttctttt ttctcaataa tcacacgatt tccaattggt
     3841 tttagcatga ttgttcctcc ttaaaaaacc taaagtttag cacttaacat tatagagtgc
     3901 taacatacat tcataataat caaatttggt caaaatttca agtcataacc tttcaattaa
     3961 gttttgtaac ttcaagttat ttacgataaa ataaattata aacaaatatt tggaggaaaa
     4021 ttatgacaag actatgggca tcgttgctaa ctgttattat ttatatattg tctcaatttt
     4081 taccgcttct cattgtaaaa aaattaccat ttgtacaata tagtggcata gaactgacta
     4141 aagcagtcat ttacatacaa cttgttctat ttttaatcgc cgccacgacg attattttaa
     4201 ttaatttaaa aattaaaaat ccaacaaaat tagaattaga agttaaagaa cataaaaaat
     4261 atatcattcc atgggcattg cttggatttg cactggtaat gatttatcaa atggtagtta
     4321 gtattgtata tactcaaatt tttggcacac aacaaacaag tccaaatact gagcgtttaa
     4381 tcgttattgc acgaaagatt ccattgttta tctttttcgt atcaatcgtt ggtcctctat
     4441 tagaagaata tgtatttaga aaagtaatct ttggcgaatt atttaatgca attaaaggta
     4501 accgtatcgt cgcatttgct attgcaacga ctgtaagctc attaatcttt gcattagcgc
     4561 ataatgacta taaatttatt cctatttact ttggtatggg cgtcattttt tcattagcat
     4621 atgtatggac gaaacgactt gctgttccaa ttattattca tatgttacaa aatggattcg
     4681 tcgttatatt ccaattactt aatcctgaag ctttgaaaaa agccacggaa caagcgaatt
     4741 ttatatatca catttttatt ccataatata aaaaacgaat cacacacgga ttatcgtcgc
     4801 tgtgattcgt ttttattttt ctttttattt cgctttacaa ataagaatag catgattgaa
     4861 aataccacca tcatagaaca tacaattgct agccaacttt tactatatgc agttgacgca
     4921 cttttcttat tatcttcttg ttttttaact actgtaaaat cgtctttttc atgcggctca
     4981 aatgaacgtt gttttgaatc cggcttatct tcgggctttt tcaaatctgg cattgatcca
     5041 atttcaccag taattaatgc gagtacttgt tcatctaaat tacgatagta cctttctgat
     5101 ttcaatggat tgaaatattg gaatctaaag taattcgatt gctgttgtaa tccatttaaa
     5161 tatgcatttc cgctgaagtt ttgtttgcgg ataatattat aaatgtcttc atcagtaact
     5221 tctccataat ctttgcccaa cttattaatt tgatttaaaa tatacggatt atacttgtat
     5281 gcaccattcg ccaaggctaa aaatcgttgg gatacaaaat cattaccagt aggattttgt
     5341 gagtttcctt gatttccatt tggttgccat tgaccttgat tagatccatc tgaagcattt
     5401 gggttccatg tccccccatt tttcgagcca ccagaatgat tggaatcccc aggttgattg
     5461 ggatctggtg acgggttagg atttggcttt ggtttatctg ggtctggttt tggatccggt
     5521 tttggtttcg ggttatctgg gtctggcttt ggttccggat ttggctttgg tttatctggg
     5581 tctggctttg gattcggaac tgggtttggg ttatttgggt caggttttga atctggactt
     5641 gggttttggt tgtttgagtc tggcttcaca ttattcgaat caggattagc atcacgacta
     5701 ttcgaatctg ttccttcatt acccgtttga tttgattcgg gaggtgtccc agtctcatta
     5761 ttatttattt cactatttac tgatggtgaa gttacattat gattcaaatt agtagttggc
     5821 ttttctccat ttaagttatc ctttgcttca actgtgtctg ttgcaagccc taaactacta
     5881 ctacttaaaa ttaaaatact tgttgaaagt aacattttcg taaaccaatg atatgacatt
     5941 tcacgagaca cctccctttt tcatgtaagt attaatctaa gtataataaa tatgcgttga
     6001 aaatgcattt atatttggaa tttgaaaatg aatattaata ttcttgaaat tttcgtaaat
     6061 attactttac aagttcgagt ataaatttta tacttagtct attaagtatt ctttactaaa
     6121 gaaggagcaa taattatggg tttatttaaa aaagataaaa aagcaatgac ttttgacaat
     6181 gcaatggaag aaagacgttc aatatataat ttgaaagatt caatatcaat tagcgatgac
     6241 gaattagaat caatgattgc acatgcagtt aaacatgttc cttcatcatt taattctcaa
     6301 tcaactagaa ttgttctctt attaaatgac aacaataata aattttggga taacacaaaa
     6361 gcaattttaa aagaagtcat gggagagaat cgtgatttcg agccaactga acaaaaaatt
     6421 gataacttca aacattcata cggtacaatt ttgttttatg aagatcaaga tgttgtaagt
     6481 ggtttacaag aacaaatgcc aaactactat gataattttg caatatggtc aactcaaaca
     6541 aatgccatgc atcaatttgc aatttggact gcattagcta ctaaaggcat aggtgcttca
     6601 ttacagcact ataatccact tgttgatgag atgacttcaa atgaatttaa tattcctaaa
     6661 agttggaaac ttattgctca aatgccattt ggtgatattc gtgaagctgc tggcgaaaaa
     6721 tcatttaatc cagtggaaga tcgtttcgta ataaaaaaat aatcaatata ttgtagggaa
     6781 tgggacagaa atgataaaga atcattaatt attcattatg tagtggttca tacacattag
     6841 ctgctgctaa tgtgtactta tgaataggaa tacatgagta aaactcatgt ataagaaata
     6901 ctaatttcta aagaaaaagt atttctttac gttagagccc accccaactt gcattgtctg
     6961 tagaaattgg tgttccaatt tct
//
LOCUS       DALMNS010000119         6894 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.119, whole genome shotgun sequence.
ACCESSION   DALMNS010000119 DALMNS010000000
VERSION     DALMNS010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6894)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6894)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6894
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.119"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            39..698
                     /gene="arlR"
                     /locus_tag="O6Y56_002345"
     CDS             39..698
                     /gene="arlR"
                     /locus_tag="O6Y56_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor ArlR"
                     /protein_id="HDB5575583.1"
                     /translation="MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSH
                     YYDLIILDLMLPSINGLEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKP
                     FDIEELLARIRAILRRQPQKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLA
                     ENKNHVMQREQILNHVWGYNSEVETNVVDVYIRYLRNKLKPYDRDKMIETVRGVGYVI
                     R"
     gene            695..2050
                     /gene="arlS"
                     /locus_tag="O6Y56_002346"
     CDS             695..2050
                     /gene="arlS"
                     /locus_tag="O6Y56_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase ArlS"
                     /protein_id="HDB5575584.1"
                     /translation="MTKRKLRNNWIIVTTMITFVTIFLFCLIIIFFLKDTLHNSELDD
                     AERSSSDINNLFHSKPVKDISALDLNASLGNFQEIIIYDEHNNKLFETSNDNTVRVEP
                     GYEHRYFDRVIKKRYKGIDYLIIKEPITTQDFKGYSLLIHSLENYDNIVKSLYIIALA
                     FGVIATIITATISYVFSTQITKPLVSLSNKMIEIRRDGFQNKLQLNTNYEEIDNLANT
                     FNEMMSQIEESFNQQRQFVEDASHELRTPLQIIQGHLNLIQRWGKKDPAVLEESLNIS
                     IEEMNRIIKLVEELLELTKGDVNDISSEAQTVHINDEIRSRIHSLKQLHPDYQFDTDL
                     TSKNLEIKMKPHQFEQLFLIFIDNAIKYDVKNKKIKVKTRLKNKQKIIEITDNGIGIP
                     EEDQDFIFDRFYRVDKSRSRSQGGNGLGLSIAQKIIQLNGGSIKIKSEINKGTTFKII
                     F"
     gene            2339..5137
                     /locus_tag="O6Y56_002347"
     CDS             2339..5137
                     /locus_tag="O6Y56_002347"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HDB5575585.1"
                     /translation="MTNERKEVSEAPVNFGANLGLMLDLYDDFLQDPSSVPEDLQVLF
                     STIKNDDSIVPALKSTSSQNSDGTIKRVMRLIDNIRQYGHLKADIYPVNPPKRKHVPK
                     LEIEDFDLDQQTLEGISAGIVSDHFADIYDNAYEAILRMEKRYKGPIAFEYTHINNNT
                     ERGWLKRRIETPYKVTLNNNEKRALFKQLAYVEGFEKYLHKNFVGAKRFSIEGVDALV
                     PMLQRTITIAAKEGIKNIQIGMAHRGRLNVLTHVLEKPYEMMISEFMHTDPMKFLPED
                     GSLQLTAGWTGDVKYHLGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDD
                     TQRAGAPTTDHHKAMPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIG
                     FTTEPIDARSTTYSTDVAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDL
                     VGYRRFGHNEMDEPSITNPVPYQNIRKHDSVEYVFGKKLVNEGVISEDEMNSFIEQVQ
                     KELRQAHDKINKADKMDNPDMEKPADLALPLQADEQSFTFDHLKEINDALLTYPDGFN
                     ILKKLNKVLEKRHEPFNKEDGLVDWAQAEQLAFATILQDGTPIRLTGQDSERGTFSHR
                     HAVLHDEQTGETYTPLHHVPDQKATFDIHNSPLSEAAVVGFEYGYNVENKKSFNIWEA
                     QYGDFANMSQMIFDNFLFSSRSKWGERSGLTLFLPHAYEGQGPEHSSARLERFLQLAA
                     ENNCTVVNLSSSSNYFHLLRAQAASLDSEQMRPLVVMSPKSLLRNKTVAKPIDEFTSG
                     GFEPILTESYQADKVTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIE
                     ALLAQLPNLEEVSWVQEEPKNQGAWLYVYPYVKVLVADKYDLSYHGRIQRAAPAEGDG
                     EIHKLVQNKIIENALKNN"
     gene            5151..6419
                     /gene="sucB"
                     /locus_tag="O6Y56_002348"
     CDS             5151..6419
                     /gene="sucB"
                     /locus_tag="O6Y56_002348"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HDB5575586.1"
                     /translation="MPEVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVN
                     VEVVSEEAGVLTEQLASEGDTVEVGQAIAVIGEGSGNASKENSNDNTPQQNEETNNKK
                     EETTNKSADKAEVNQTTDDNQQRVNATPSARRYARENGVNLAEVSPKTNDLVRKEDID
                     KKQQAPASTQTTQQAPAKEEKKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLT
                     TFNEVDMTNVMELRKRKKDQFMKDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDD
                     MITKQYYDIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVN
                     GSFTITNGGIFGSMMSTPIINGNQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYD
                     HRIIDGKEAVGFLKTIKELIENPEDLLLES"
BASE COUNT         2586 a         1018 c         1256 g         2034 t
ORIGIN      
        1 ttaccttatt agaaaaagtc gtaatatgag gtgtacaaat gacgcaaatt ttaatagtag
       61 aagatgaaca aaacttagca agatttcttg aattggaact cacacatgaa aattacaatg
      121 tggacacaga gtatgatgga caagacggtt tagataaagc gcttagccat tactatgatt
      181 taatcatatt agatttaatg ttgccgtcaa ttaatggctt agaaatttgt cgcaaaatta
      241 gacaacaaca atctacacct atcattataa ttacagcgaa aagtgatacg tatgacaaag
      301 ttgctgggct tgattacggt gcagacgatt atatagttaa accatttgat attgaagaac
      361 ttttagcaag aattcgtgcg attttacgtc gtcagccaca aaaagatatt atcgatgtca
      421 atggtattac aattgataag aatgctttta aagtgacggt aaatggcgca gaaattgaat
      481 taacaaaaac agagtatgat ttactatatc ttctagctga aaataaaaac catgttatgc
      541 aacgggaaca aattttaaac catgtatggg gttataatag tgaagtagaa acaaatgtcg
      601 tagatgttta tataagatat ttaagaaaca agttaaaacc atacgatcgt gacaaaatga
      661 ttgaaacagt tcgtggcgtt gggtatgtga tacgatgaca aaacgtaaat tgcgcaataa
      721 ctggattatt gttaccacga tgattacgtt tgtcacgata tttttgtttt gtttaattat
      781 tatctttttc ttgaaagata cactgcataa tagtgagctt gatgatgcag aacgaagctc
      841 aagcgatatt aataatttat ttcattctaa gcctgttaaa gatatatctg cattagactt
      901 gaatgcatct ttaggtaatt ttcaagagat tattatttat gatgagcata ataataaatt
      961 atttgagaca tcgaatgata acacagtgag agttgaacca ggttatgaac acaggtattt
     1021 tgaccgcgta ataaaaaaac gttataaagg cattgattat ttaattatta aagaaccaat
     1081 cacaacgcaa gatttcaaag ggtatagctt gttaattcat tcactagaaa attatgataa
     1141 tatcgtaaaa tcattgtata tcattgcgct cgcatttgga gtgattgcaa caattataac
     1201 tgccacaatc agttatgtat tttcaactca aataactaaa ccgcttgtca gtttatcaaa
     1261 taaaatgatt gagattcgac gagatggttt tcaaaataaa ttgcaattaa atacaaatta
     1321 tgaagaaata gataatttag caaatacgtt taatgagatg atgagccaaa ttgaagaatc
     1381 atttaatcaa caaagacaat ttgttgaaga tgcgtcacat gaattacgaa caccattaca
     1441 aattattcaa ggtcatttaa atttgattca gcgatgggga aaaaaagacc cggcagtatt
     1501 agaagaatcg ttaaatattt ctattgaaga aatgaatcgt atcataaaat tagtcgaaga
     1561 attacttgaa ttgactaaag gagatgtaaa tgacatttct tctgaagcgc agaccgtgca
     1621 tattaatgat gaaattcgct cgcgaataca ctcattaaaa caattgcatc cagattatca
     1681 atttgatacg gatctgacat ctaaaaatct agaaattaaa atgaaacctc atcaattcga
     1741 acaattattt ttaatcttta ttgataatgc aatcaaatat gatgtgaaga ataagaaaat
     1801 taaagttaag acaaggttaa aaaataagca aaaaataatt gaaattacag ataatggaat
     1861 tggtattcca gaggaagatc aagatttcat ttttgatcgc ttttatcgag tggataaatc
     1921 tcgttcaaga agtcaaggcg gtaatggact cggattatct attgcgcaaa aaatcattca
     1981 attaaacggt ggatcgatta aaattaaaag tgaaattaac aaaggaacaa cgtttaaaat
     2041 catattttaa tcatgtctga gacgtcaatt aaagtcatag gatcaattat ttaagtacac
     2101 attagctatg actaatgtat aagaacggct ataaaacaaa taaacagtgg ttctttatca
     2161 tttctgtgga actcacctcc caaaatttac aataaaatac atctataaac ctagaagaat
     2221 caacgctttt gttgattctt ctttttagca tataaatagg taaatctact ttaacaaata
     2281 actaaatagt gatattatta cattgtaagc gtttcaacat ttttgtggag ggtgtaaaat
     2341 gactaacgaa agaaaagaag tttcagaggc tcctgtaaac ttcggtgcga atttaggtct
     2401 aatgttagat ctatatgatg actttttaca agatccatca tctgtaccag aagatttaca
     2461 agtcttattc agcacaatta agaatgatga ctcaattgta ccagctttaa aaagtacaag
     2521 tagtcaaaat agcgacggca caattaagcg tgtcatgcgt ttaattgata atattcgcca
     2581 atacgggcat cttaaagccg atatttatcc tgtaaatcct ccgaaaagga aacatgtacc
     2641 taaattagag attgaagact ttgatttaga tcaacagact ttggaaggta tatcagcagg
     2701 aattgtttca gatcactttg ccgacattta tgataatgct tatgaagcaa ttttaagaat
     2761 ggaaaaacgt tacaaaggac caattgcatt tgagtataca catattaata acaataccga
     2821 acgtggttgg ttaaaaagaa gaattgaaac gccatataaa gtaacgttaa ataataacga
     2881 aaaaagggca ctattcaaac aattagcgta tgttgaaggg tttgaaaaat atcttcataa
     2941 aaacttcgtt ggtgctaagc gtttttcaat tgaaggggta gacgcacttg taccgatgtt
     3001 acaacgtact attacgattg ctgcgaaaga aggtattaaa aatatacaaa taggcatggc
     3061 tcaccgtgga cgtttaaacg ttttaacgca tgtcttagaa aaaccgtacg aaatgatgat
     3121 ttcagaattt atgcatacag atccaatgaa attcttacct gaagatggta gcttgcagtt
     3181 aactgctgga tggactggtg atgtgaaata tcaccttggt ggcattaaaa ctactgattc
     3241 atacggtaca atgcagcgta ttgcactggc aaacaatcca agtcacttgg aaattgttgc
     3301 acctgttgtt gaagggcgta caagagcagc acaagatgat acacagcgtg ctggggctcc
     3361 gacgactgat catcataaag caatgccaat tattatacac ggcgatgctg cttatcctgg
     3421 tcaaggaatt aacttcgaaa caatgaactt aggaaacttg aaaggctatt ctacgggtgg
     3481 ttcattgcat attattacta acaatagaat tggatttact acagaaccaa ttgatgcacg
     3541 ttcaacaact tattctacag atgtggctaa aggttatgat gtgccaatat tccatgtcaa
     3601 tgctgatgac gttgaagcta ctattgaagc aattgatatt gcaatggaat ttaggaaaga
     3661 gtttcataaa gacgtcgtta ttgatttagt aggttatcgt cgtttcggac ataacgaaat
     3721 ggatgaacca tcaattacta atccagttcc ttatcagaat attcgcaaac atgactctgt
     3781 tgaatatgtg tttggtaaaa agcttgttaa tgaaggtgtc atttcagaag atgaaatgaa
     3841 ttcatttata gaacaagtcc aaaaggaact aagacaagca catgataaaa ttaataaagc
     3901 tgataaaatg gataatccag atatggaaaa gcctgcagat cttgcattac cgttacaagc
     3961 agacgaacaa tcatttacgt ttgatcactt gaaagaaata aatgatgcat tgttaacata
     4021 tccggatggc tttaacattt tgaaaaagtt aaacaaagtt cttgagaagc gtcatgagcc
     4081 atttaataag gaagatggtt tagttgattg ggcacaagca gaacaacttg catttgcgac
     4141 aattttacaa gatggtacac cgattcgctt aactggtcaa gatagtgaac gtggtacatt
     4201 cagtcatagg catgccgtgt tacatgatga gcaaacaggt gaaacatata cacctttaca
     4261 tcatgttcct gatcaaaaag cgacatttga tatacacaat tctccgcttt cagaagcagc
     4321 agtagttggt tttgaatacg gctataatgt ggaaaacaaa aaaagcttca atatttggga
     4381 agcacaatat ggtgattttg caaatatgtc acaaatgatt tttgacaact tcttattcag
     4441 ttctcgctca aaatggggag aacgttcagg attaacatta ttcttacctc atgcatatga
     4501 gggtcaagga cctgaacatt catcagcaag attagagagg tttttacaat tagctgctga
     4561 aaataattgc acagttgtca acttatctag ttcaagtaat tatttccact tattgcgtgc
     4621 acaagcggct agtttagatt ctgaacaaat gcgaccatta gttgttatgt cgccaaaaag
     4681 cttgctgaga aataaaacag ttgcaaaacc aattgatgaa tttacttctg gtggatttga
     4741 gccaattttg acagaatcat atcaagcgga taaggttaca aaagttattt tagcaactgg
     4801 taaaatgttc attgatttaa aagaagcatt agctaaaaat ccagacgaat cagtattact
     4861 cgttgcgatt gaaagattgt atccattccc agaggaagag attgaagcat tactagcaca
     4921 attgccaaac cttgaagaag tgtcatgggt acaagaagaa cctaaaaatc aaggtgcctg
     4981 gttatatgtt tatccatatg ttaaagtgct agttgcagat aaatatgatt taagttatca
     5041 tggcagaatt caaagggctg ctccagctga aggcgatgga gaaattcata aacttgttca
     5101 aaataaaatt atagaaaatg cattaaaaaa taactagggg gaaataagtc atgccagagg
     5161 ttaaagttcc agaattagca gaatctatta cagaaggtac cattgcagaa tggttgaaaa
     5221 acgtagggga tagcgtagaa aaaggtgaag ctattcttga attagaaact gataaagtta
     5281 atgtcgaagt tgtatctgaa gaagcaggtg tattaactga acaacttgca agtgaaggcg
     5341 acactgtaga agttggacaa gcaattgctg tcatcggcga aggtagtggc aatgcttcta
     5401 aagaaaatag taacgacaat actccacaac aaaatgaaga aacaaataat aaaaaagaag
     5461 aaacaacaaa taaatcggca gataaagctg aagtcaatca aacaactgat gacaatcagc
     5521 agcgtgttaa tgctacacct tctgcgcgtc gatatgctcg tgaaaatggt gtgaatcttg
     5581 ctgaagtaag tccgaaaaca aatgatcttg ttcgtaaaga agatattgat aagaaacaac
     5641 aggcaccggc atcaacacaa acaacacaac aagcacctgc aaaagaagag aaaaaataca
     5701 atcaatatcc tacaaaacca gtgattcgtg aaaaaatgtc acgcagaaag aaaacagctg
     5761 ctaaaaaatt attagaggta tctaataata cagctatgtt aacaactttt aacgaagttg
     5821 acatgacaaa tgttatggaa ttgcgtaaac gtaagaaaga ccaatttatg aaagatcatg
     5881 atggtactaa attaggattt atgtcattct ttactaaagc ttctgtagca gctttgaaaa
     5941 agtatccaga agttaatgca gaaatcgacg gcgacgacat gattacgaaa caatattatg
     6001 atattggtgt agctgtttct acagatgatg gattattagt accattcgta agagattgtg
     6061 ataaaaagaa ttttgcagaa atcgaagcag aaattgctaa tttagcagtt aaagcacgag
     6121 agaaaaaact tggcttagat gatatggtta atggttcatt tacgattaca aatggcggta
     6181 tttttggatc aatgatgagt acgccaatta tcaatggtaa tcaagctgca attttaggca
     6241 tgcattcaat tattacaaga ccaattgcga ttgatcaaga tacaatcgaa aatcgtccaa
     6301 tgatgtatat tgcattaagc tatgatcata gaattattga cggtaaagaa gcagttggat
     6361 tcttaaaaac aattaaagaa ttaattgaaa acccagaaga cttattatta gaatcttaat
     6421 ccacaacaca aaatagttta ctattcctaa aaacgggatc aaatcaataa caaacagcag
     6481 taagattatt ttctagtcga aatatcttac tgctgtactt tatttttata atgattcgta
     6541 ttaaaatgtg ggtttatttt tgactactta aaaaatatat catttctatt gaaatagact
     6601 cacaatagaa atataggtag aatagcgtgt ttcaatatgc taatgaatgc attttagata
     6661 ataacaaacg atgaaattta tgaattctat aagcgccttt agttaattta aaatcatctg
     6721 aacatgatgt aaattcgctt tatggacacg acatatatat gtttttcatg tcctacaaaa
     6781 aacgaaatat tcaattgcta tatactgata ctcattaatg acatactcaa tagcaaccat
     6841 aactatatta tgttacctat ttaaatgaaa tagttctttt aaagaaatac attt
//
LOCUS       DALMNS010000120         6888 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.120, whole genome shotgun sequence.
ACCESSION   DALMNS010000120 DALMNS010000000
VERSION     DALMNS010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6888
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.120"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            192..337
                     /locus_tag="O6Y56_002349"
                     /pseudo
     CDS             192..337
                     /locus_tag="O6Y56_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000226109.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative holin-like toxin"
     gene            876..974
                     /locus_tag="O6Y56_002350"
                     /pseudo
     CDS             876..974
                     /locus_tag="O6Y56_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499520.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            987..1253
                     /locus_tag="O6Y56_002351"
     CDS             987..1253
                     /locus_tag="O6Y56_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001790097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactococcin 972 family bacteriocin"
                     /protein_id="HDB5575587.1"
                     /translation="MYGAILYLSLALGLSTAAFASTEYAEGGTWSHGVGSKYVWSYYY
                     HGHKGHGATASGKYRSFSGYTRAGVKASTTKHNWWVNRAYYNIY"
     gene            1297..3261
                     /locus_tag="O6Y56_002352"
     CDS             1297..3261
                     /locus_tag="O6Y56_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin-associated integral membrane family
                     protein"
                     /protein_id="HDB5575588.1"
                     /translation="MKWFKLILDVTIFILIAILLFVYTYKENQEILTDTKYPIAVTDW
                     NKKYSKNEIYKRIDQFAKKENVAIYKSTSNYTNKNVDKDIYVFNKSKATTITPFNAKY
                     NIHYLSDDELLKKDIKGSYFVKDKNFDVSKFINFLKEYGVTAESFKIDHMMIAVGVIK
                     QMNIVVPLSSLLIVYFIYYIFEKNINFKAYAIKYLNGFTLRKIIFENFSKKCTYWVTL
                     IITQILLTTSVLWILNYTGNLDLFILRLVLLSCLFILTISVINLWTFLMLLNLNIANM
                     IKGKQHFKTIRFINTVCKSILLVLIASVMIENTSVIKDLNKIKETEKYWNVLDDYYTI
                     EFAPYHETKQSLIDNMLRSEQLVKASEAENNAILFKPKGDSVDNDNFSPDEGNVILVN
                     NQFWSIYHKQFQPDIPIKNQKNNVEVIIPQKFHAMRNEINQAYHSWFEFVQNKNNKEN
                     KLSIQFINKNDYRIFSFDARDSRHLSFIEAPIIVNVQASDLSNDFYYAMISQGGYLFK
                     NYDALVKSIEKYHLDGEISGITNYKDSVMEMYHENNLKLTVLNFSQIIIAIILIIIIL
                     FDVKYYFEQHRKLLVIKKLYGYSTLRANYRYLLINNIVVVFIGILTNVILHSHYIMMI
                     FATILVVQILLQICSLYYHGRRFNEVIKEF"
     gene            3264..3584
                     /locus_tag="O6Y56_002353"
     CDS             3264..3584
                     /locus_tag="O6Y56_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YxeA family protein"
                     /protein_id="HDB5575589.1"
                     /translation="MKFIIAILLGLIVSITIAFTIIHHPILDRFNPFLKTEYSYAKVP
                     KGTQQYVNITAYSERGEKLDYKLTFNGFSPSRTYVEIKHKGQYVISITYVEKEDTPKE
                     VRQE"
     gene            3581..4222
                     /locus_tag="O6Y56_002354"
     CDS             3581..4222
                     /locus_tag="O6Y56_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDB5575590.1"
                     /translation="MIELKDLTIQKGNTHILKKLNLKFQCGKSYALIGKSGCGKSTLL
                     NTIAGLEKTGKQYVYFNGQLEQFKSNFYRDKLGYLFQNYGLIDNLTVNENLDIGLAYK
                     KISKKEKEQLKIRYIEQFGLSNSLKRKVHTLSGGEQQRVALIRMMLKDPIVMLADEPT
                     GALDPKTGQMIIQSLFDLVNENKVLILATHDMAIANQCDEIIDLEQYRKVASM"
     gene            complement(4310..4600)
                     /locus_tag="O6Y56_002355"
     CDS             complement(4310..4600)
                     /locus_tag="O6Y56_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575591.1"
                     /translation="MFYACHFKMKIGGVILTRTYNIIGILSCLISFIIMALPMIWYTA
                     SALWFFPGAIMILLLSLVIVFCYIKTKNQLHLLLIVLNIIILLFFSLPLLLS"
     gene            4741..4878
                     /locus_tag="O6Y56_002356"
     CDS             4741..4878
                     /locus_tag="O6Y56_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001788572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(glycerol-phosphate)
                     alpha-glucosyltransferase"
                     /protein_id="HDB5575592.1"
                     /translation="MADKILQLINNDVLAAEFGSKARENIIEKYSTESILEKWLNLFN
                     S"
     gene            complement(4967..5323)
                     /locus_tag="O6Y56_002357"
     CDS             complement(4967..5323)
                     /locus_tag="O6Y56_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDB5575593.1"
                     /translation="MKLGMLLIRWMLATSFLVHGTLKFVDLDGTIHFLGSLGLPPTIA
                     VLMSIGEVVGGLALIIGFLTPYVNVFYICVMLGSIFTLKLTRGYVSGYEFEIIHIVMN
                     LACISSYSWKKWLQFY"
     gene            5811..6770
                     /locus_tag="O6Y56_002358"
     CDS             5811..6770
                     /locus_tag="O6Y56_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001081330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDB5575594.1"
                     /translation="MNRNIVKLVVFMLIFVVAVAGCGQKDTEEKTEMTTIKDELGTEK
                     IKKNPKRVVVLEYSFADYLAALDMKPVGIADDGSSKNITKSVRDKVGAYESVGSRPQP
                     NMEVISKLKPDLIIADVSRHKKIKSELSKIAPTIMLVSGTGDYNANIDAFKTVAKAVG
                     KEKEGEKRLEKHDKILAEIRKKIEQSTLKTAFAFGISRAGMFINNEDTFMGQFLIKMG
                     IQPEVTKDKTTHVGERKGGPYIYLNNEELANINPKVMILATDGKTDKNRTKFIDPAVW
                     KSLKAVKDNKVYDVDRNKWLKSRGIIASESMAEDLEKIAEKAK"
BASE COUNT         2670 a          860 c         1128 g         2230 t
ORIGIN      
        1 tgctttagaa tagcaatacg aagattcgag gcatgcttta ttatagtgta tacattttaa
       61 cggcaagcag ttatcattga ggttatattt tagtcagttt tttattacta aatattttat
      121 aaaaatggta taatattttg tgggcaagtt gaattgatgg tggctatctg agtaaagggg
      181 gggtggtgcc tatggcatta cttaacactt ttgaaaggaa aagcctattg tgatatctat
      241 tgcaaacgca ttacatttaa tgttaagttt cggtatgttt atcgtcactt tcattggtat
      301 agtagtcgca ataataaatt taagcaataa aaaataacca tcatttcaaa actttgacat
      361 agaatgatgg ttaaagaaaa tctcatttag tcaccgtctt tttaacgggc tcattaggcg
      421 acatgttcct ccatgtcgtc tttttatatt tttatagtaa catatctttt atttaattgt
      481 ctatttttat tagatgtgta acaaaatttt gaagtatttt ccttatattg cttgctaaac
      541 atgtcagatt tgaaaggaaa atcatactat agtagaaatc acttatgatt ctatggcagt
      601 acttatacat aagtgatttc tattgaatat gtaatgaagt tcatatatta atataacttt
      661 cattggtata gtattcgcaa tgattaattt aaacaatata aaacaaccat catttcaaaa
      721 ctttgacaaa gaataatggt taaagcaaat ctcatttagt caccgtcttt ttaacgggtt
      781 caataggcga catgttcctg catatcgtct atttatgcac tgcgcaattt aataataata
      841 caattatact ttgatgtcca tttaacataa agtagttgaa atttgcagca aataaattaa
      901 tcttgactat tttcagaaaa ttctgtataa ataacaaaaa agagatatgg attaaatatg
      961 aagaggtgtt tttagagaag aacaaaattt atggcgctat attatattta tctttagcac
     1021 ttggattatc aacagcagct tttgcatcta cagaatacgc agaaggaggc acttggagtc
     1081 acggtgtcgg cagtaagtat gtttggtctt attattatca tggtcataaa ggacatggtg
     1141 caacagctag tggaaaatac agatcattta gtggttatac aagagctggt gtaaaagcat
     1201 caactactaa acataattgg tgggtcaata gagcatatta taacatttat taaatactaa
     1261 ataatcatac aaaataaaca acgcaagagg tacaacatga aatggttcaa attaatactt
     1321 gatgttacaa tcttcattct gattgctata ttgttatttg tttatacata taaagaaaac
     1381 caagaaatat tgactgatac taaataccct atagcggtaa ctgactggaa taaaaaatat
     1441 agtaaaaatg agatttataa acgtatagat cagttcgcta aaaaagagaa cgtagcaatc
     1501 tataaatcaa cttcaaatta tacaaacaaa aatgtagata aagatatata tgtatttaat
     1561 aaatcaaaag caacaactat cactcctttt aatgctaaat ataacattca ttatttaagt
     1621 gatgacgaat tattaaaaaa agatatcaaa gggagttatt ttgtaaaaga caaaaatttt
     1681 gacgtgtcta aattcataaa ttttttaaaa gaatatggtg ttactgctga atcattcaaa
     1741 atagatcata tgatgattgc cgttggtgtc attaaacaaa tgaatatagt agttccgtta
     1801 tcctcacttt taatcgttta ttttatttat tatattttcg aaaagaacat taatttcaaa
     1861 gcgtatgcga ttaagtattt aaatggtttt acattaagaa aaataatttt tgaaaatttt
     1921 tcaaagaaat gcacgtattg ggtaacgtta atcataactc aaattctttt aactacaagt
     1981 gtactttgga tattaaatta cacgggtaat ttagatttat tcatattaag attagttctg
     2041 ctttcatgtc tttttatttt aacgattagt gttattaatt tatggacttt cttaatgtta
     2101 ctaaatttaa atattgccaa tatgattaaa ggtaagcagc actttaaaac gattcgtttt
     2161 attaatacag tttgtaaaag tattctctta gtactaatag ctagtgtaat gatagaaaat
     2221 actagtgtta ttaaagattt gaataaaata aaggaaactg agaagtattg gaatgtatta
     2281 gatgattatt acacgattga atttgcacct tatcatgaaa cgaaacaaag tttgattgat
     2341 aatatgctgc gatcagaaca attagtaaag gctagtgaag cagaaaataa tgcgatttta
     2401 ttcaaaccaa agggtgactc cgttgacaat gacaactttt cgcctgatga ggggaatgta
     2461 atattagtaa ataatcagtt ctggtcgatt tatcacaagc agtttcaacc tgatattccg
     2521 ataaaaaatc aaaaaaataa tgtcgaagta attattccac aaaagtttca tgcaatgcgt
     2581 aatgaaatca atcaagcata tcattcatgg tttgaatttg tacaaaataa aaataataaa
     2641 gagaataagt tatctataca gtttatcaac aaaaatgatt atcgaatttt ttcatttgat
     2701 gcacgagata gtcgccattt gtcatttata gaggcgccaa tcattgtgaa tgttcaggca
     2761 tcagatttat cgaatgattt ttattatgcc atgatcagtc aaggcgggta tttattcaaa
     2821 aattatgacg cgctagtaaa aagtattgaa aagtatcatc ttgatgggga aatcagtgga
     2881 ataaccaatt ataaagatag cgtgatggaa atgtatcatg aaaacaattt gaaattaaca
     2941 gtactcaact tttcacaaat cattatcgca atcattttaa taattattat tttatttgat
     3001 gtgaaatatt attttgaaca acatcgaaaa ttactcgtaa tcaaaaagct atatggttat
     3061 tcaacattaa gagccaatta ccgatactta ttaataaata atatagttgt tgtttttatt
     3121 ggaatattga cgaatgtaat tttacattct cactatataa tgatgatatt tgcaacgatc
     3181 cttgtcgttc aaatattatt gcagatttgc agcctatact atcatggccg acgttttaat
     3241 gaagttatca aggagtttta actatgaaat ttatcattgc aatattatta ggattaatcg
     3301 tatccattac tattgctttt acaatcatac atcatcctat actagatcgt tttaatcctt
     3361 tcttaaaaac ggagtatagt tatgccaaag tgccaaaagg tacgcaacaa tatgttaata
     3421 ttacggctta tagtgaaaga ggggaaaagc ttgattataa attaacattt aatggatttt
     3481 cacctagtag aacgtatgtc gaaataaagc ataaagggca atatgttata tccatcacat
     3541 atgttgaaaa agaggataca ccaaaagagg taagacaaga atgatagaat taaaagattt
     3601 aaccatacaa aaaggtaata cacatatttt gaagaaactt aatttgaaat ttcaatgtgg
     3661 aaaatcatat gcacttattg gtaaaagtgg atgcggtaaa tctacactat taaatactat
     3721 tgctggactt gaaaaaacag ggaaacaata tgtctatttt aatggtcaat tagaacaatt
     3781 taaatctaat ttttacagag ataaattagg ctatttattt caaaattatg gattaatcga
     3841 taatctgaca gtaaatgaaa atttagatat tggattagca tataaaaaaa taagtaagaa
     3901 agaaaaagaa caattaaaga tacgttatat agaacagttt ggtctgtcaa acagtttaaa
     3961 aagaaaagtt catacgctaa gtggaggtga acaacaacgt gtcgctttaa ttagaatgat
     4021 gttaaaagat ccgattgtta tgttagctga tgaaccaacg ggtgcgttag atcctaaaac
     4081 aggacagatg attattcaat cattatttga tttggtcaat gaaaataaag tgctaatttt
     4141 agcaacacat gatatggcta ttgcaaatca atgtgatgaa ataatagatt tagaacagta
     4201 tagaaaagta gcatctatgt aatatccaaa agataaaatt aaaagccaat caattgggaa
     4261 tgttaagttc aacactccgt ttgattggct tttataatgc gttgctatgt tatgaaagta
     4321 ataacggcaa actgaaaaaa agcaatataa taatatttaa tacgattagt aataaatgta
     4381 attgattttt cgttttaata tagcaaaaaa caatgactaa agataacaac aatatcatga
     4441 ttgcacctgg gaagaaccat aatgctgaag ctgtgtacca aatcattggt aacgccataa
     4501 taataaaaga tataagacaa gaaaggatac caataatatt ataagttcta gtcaaaatta
     4561 cacctccaat tttcatttta aaatgacatg cgtaaaacaa tcattttaaa tacatcatac
     4621 aataaaatta aattgtatga tagatgaatt tgaaattaaa ttgaattggc ttgattaaaa
     4681 ggtgatttta tagaggataa taaaaatggt tatttaatag aaaaccataa tattaacgac
     4741 atggctgata aaatacttca gcttattaat aatgatgtat tagcagcgga gtttggttcg
     4801 aaagcaagag aaaacattat agaaaaatat tcaacggaat caatattaga aaaatggtta
     4861 aatcttttca atagctaaat gaaaaaatcc taggtattca tgagtaccta ggatttttac
     4921 gcatgatata tacaaaaaaa gagaggatag tcctctcaaa taatagttaa taaaattgta
     4981 gccatttctt ccagctataa ctactaatac aagctaagtt cattacgata tgtatgattt
     5041 caaattcata accacttaca tatcctcttg taagtttaag tgtgaagatt gagcctaaca
     5101 taacacaaat ataaaaaaca ttaacataag gcgttaaaaa gccgataata agtgctaaac
     5161 ctccaacaac ttcaccaatt gacatcaata ctgcgatggt aggtggtaaa cctaaagagc
     5221 ctaagaagtg aattgttcca tctaaatcaa caaatttcaa agtaccatgc actaagaatg
     5281 atgttgctaa catccatcta attaaaagca tacctaattt catcatgtca cctccaacat
     5341 tcgtattttt aaaacatagt ccaaattata tttgtaaaca tgtggaaagt aaagattttt
     5401 tataagatta attattaaat atttattaaa tattctattg tattgaacaa ttgttgtaga
     5461 aagatgttta agtcatcagt tactttttgc atttataaat aaagattagt acagcatagt
     5521 gcaaagatta tagggaaatg aattaactat tgcatcacta tttatgaatc gtaatcacta
     5581 ttatgaaatt gcaagagtag tatggacaat tagaatgatg gtttgagata aatgagtgtt
     5641 attgaccagt gcgtcatctt caaaattgga ggccatttgc tgtttataat aagaagattt
     5701 gataatcaac tatgataaga aaaaataata actccctaaa tatatcataa acaaattaaa
     5761 tgataaaata ataatatagt tttctactaa agttgtttgg aggtaaatgt gtgaatagga
     5821 atatcgttaa attagttgtg tttatgctaa tcttcgttgt agcagtagcg ggttgtggtc
     5881 aaaaagatac tgaagagaaa actgaaatga cgacaataaa agatgaatta ggaactgaaa
     5941 aaattaagaa aaatcctaaa cgtgttgttg tattagaata tagttttgct gattatttag
     6001 cagcattaga tatgaaacct gttggtattg cagatgatgg cagcagtaaa aatataacaa
     6061 agtcagtaag agataaggtt ggggcatatg aatcggttgg atctagaccg caaccgaata
     6121 tggaagtgat aagtaaatta aaaccggatt tgatcatagc agatgttagc agacataaga
     6181 aaatcaaatc agaattaagc aaaattgctc cgacaatcat gttagttagc ggtacgggag
     6241 attataatgc aaatattgat gcatttaaaa cagtcgctaa agcagtaggc aaagagaaag
     6301 aaggcgagaa acgtctggaa aagcatgata aaatattagc ggagattaga aagaaaattg
     6361 aacagagtac gttaaaaact gcatttgcat tcggtatctc aagagcaggt atgtttatta
     6421 ataatgaaga tacatttatg ggacaattct taattaaaat gggtattcaa cctgaagtca
     6481 caaaagacaa aactacgcat gttggtgaac gcaagggtgg tccttatatt tatttaaata
     6541 atgaagaact tgccaatatc aatccaaaag ttatgatttt agccactgac ggaaaaacgg
     6601 acaaaaatag aacgaaattc attgatcctg cagtttggaa atcattaaaa gctgtgaaag
     6661 ataacaaagt ttatgacgtt gaccgaaata agtggttgaa atcaaggggt attatcgcaa
     6721 gtgaaagtat ggcagaagat ttagaaaaaa ttgcagaaaa agcaaaataa aaatacagcg
     6781 ccactcgtaa atcatataag agtggcgctg tatttttaat tatgtttatt atctgtcgga
     6841 tgtgatgatt tacctgaaag tttatttcga ataaatttaa ttacataa
//
LOCUS       DALMNS010000121         6740 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.121, whole genome shotgun sequence.
ACCESSION   DALMNS010000121 DALMNS010000000
VERSION     DALMNS010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6740)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6740)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6740
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.121"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            687..1982
                     /gene="purB"
                     /locus_tag="O6Y56_002359"
     CDS             687..1982
                     /gene="purB"
                     /locus_tag="O6Y56_002359"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDB5575595.1"
                     /translation="MIERYSREEMSNIWTDQNRYEAWLEVEILACEAWSELGHIPKAD
                     VQKIRQNAKVNVERAQEIEQETRHDVVAFTRQVSETLGEERKWVHYGLTSTDVVDTAL
                     SFVIKQANDIIEKDLERFIDVLAEKAKNYKYTLMMGRTHGVHAEPTTFGVKMALWYTE
                     MQRNLQRFKQVREEIEVGKMSGAVGTFANIPPEIESYVCKHLGIGTAPVSTQTLQRDR
                     HAYYIATLALIATSLEKFAVEIRNLQKTETREVEEAFAKGQKGSSAMPHKRNPIGSEN
                     ITGISRVIRGYITTAYENVPLWHERDISHSSAERIMLPDVTIALDYALNRFTNIVDRL
                     TVFEDNMRINIDKTFGLIFSQRVLLALINKGMVREEAYDKVQPKAMTSWETKTPFREL
                     IEQDESITSVLTKEELDECFDPKHHLNQVDTIFERAGLA"
     gene            2091..2393
                     /locus_tag="O6Y56_002360"
     CDS             2091..2393
                     /locus_tag="O6Y56_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575596.1"
                     /translation="MQIEKLRGAALDELFDAILTLENREECYQFFDDLCTVNEIQSLS
                     QRLQVAKMIKQGYTYATIEQESGASTATISRVKRSLQWGNDAYTMILDRMNIETNE"
     gene            2565..3257
                     /locus_tag="O6Y56_002361"
     CDS             2565..3257
                     /locus_tag="O6Y56_002361"
                     /EC_number="2.5.1.n9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heptaprenylglyceryl phosphate synthase"
                     /protein_id="HDB5575597.1"
                     /translation="MYDIKKWRHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVT
                     EDNVIHLMSRVRRYPLPLVLEISNIESVMPGFDFYFVPTVLNSTDVAFHNGTLLEALK
                     TYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYI
                     EYSGVYGDVSKVQAVSEYLTETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKK
                     ALKTVKIKESSK"
     gene            3254..5446
                     /gene="pcrA"
                     /locus_tag="O6Y56_002362"
     CDS             3254..5446
                     /gene="pcrA"
                     /locus_tag="O6Y56_002362"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase PcrA"
                     /protein_id="HDB5575598.1"
                     /translation="MNALLNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYL
                     LDEKDVSPYNVLAITFTNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADR
                     IGIERNFTIIDPTDQKSVIKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPADAQKE
                     ATDYHSQMVATVYSGYQRQLSRNEALDFDDLIMTTINLFERVPEVLEYYQNKFQYIHV
                     DEYQDTNKAQYTLVKLLASKFKNLCVVGDSDQSIYGWRGADIQNILSFEKDYPEANTI
                     FLEQNYRSTKTILNAANEVIKNNSERKPKGLWTANTNGEKIHYYEAMTERDEAEFVIR
                     EIMKHQRNGKKYQDMAILYRTNAQSRVLEETFMKSNMPYTMVGGQKFYDRKEIKDLLS
                     YLRIIANSNDDISLQRIINVPKRGVGPSSVEKVQNYALQNNISMFDALGEADFIGLSK
                     KVTQECLNFYELIQSLIKEQEFLEIHEIVDEVLQKSGYREMLERENTLESRSRLENID
                     EFMSVPKDYEENTPLEEQSLINFLTDLSLVADIDEADTENGVTLMTMHSAKGLEFPIV
                     FIMGMEESLFPHIRAIKSEDDHEMQEERRICYVAITRAEEVLYITHATSRMLFGRPQS
                     NMPSRFLKEIPESLLENHSSGKRQTIQPKAKPFAKRGFSQRTTSTKKQVSSSDWNVGD
                     KVMHKAWGEGMVSNVNEKNGSIELDIIFKSQGPKRLLAQFAPIEKKED"
     gene            5450..>6740
                     /gene="ligA"
                     /locus_tag="O6Y56_002363"
     CDS             5450..>6740
                     /gene="ligA"
                     /locus_tag="O6Y56_002363"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDB5575599.1"
                     /translation="MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIK
                     IEEEHPEYKTVDSPTVRVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQI
                     GNVEYMCELKIDGLAVSLKYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKEPL
                     NVEVRGEAYMPRRSFLRLNEEKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFI
                     YSVNDFTDFNARSQSEALDELDKLGFTTNKNRARVNNIDGVLEYIEKWTSQRESLPYD
                     IDGIVIKVNDLDQQDEMGFTQKSPRWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTA
                     ILEPVKVAGTTVSRASLHNEDLIHDRDIRIGDSVVVKKAGDIIPEVVRSIPERRPEGA
                     VTYHMPTHCPSCGHELVRIEGEVALRCINPKCQAQLVE"
BASE COUNT         2501 a          931 c         1314 g         1994 t
ORIGIN      
        1 gatcgaaagt ttcatgaaaa tgtattagtc gatttcgaaa gaagcgtagt caatttatgt
       61 ctttctataa aaatttacta ttatgaaaat ctctgcgtat ttttctacaa tcagtttcgt
      121 atttatacga ttctggagtt cgatattaat ggcttatatt taaaatgcca tacctatgca
      181 atagaacata tattcttttt gtgagtagaa aatttgttat attagaagtg aataatttta
      241 aaacatatta tgaaatgtaa gaagaaatat tatgaaacta ggtaaagtag attgttgaaa
      301 attccataca ataggagaag taaagtgaat attatctgat attactaaag cttttgattg
      361 tcctaattgt aataaaaagt tggatagtgt acttgagggg agaaaaacta aaatgcaata
      421 atatattctt aatggatcat tataaatacc aattagatta aagtgttgcg aacatttaca
      481 attagaaatc agtattaatc tgccatagat aattgtatta atgtaaaaaa taaaatagaa
      541 tgagaatata cggaaatttt ttatacattt ataaccaatt ctgttaaact gtgaagagta
      601 gagttaaaaa cgaacttttt atttattttt gttaaaaatg ttctgttttt gaaaattcga
      661 gtatacatac gataggagtt aaaaaaatga ttgaacgtta ttctagagaa gaaatgtcta
      721 atatttggac tgatcaaaat cgctatgaag catggttaga agtggaaatt ttagcatgtg
      781 aggcatggag tgaattagga cacataccga aagctgacgt acaaaaaatt cgtcaaaacg
      841 caaaggtaaa tgtcgaacgt gcacaagaaa ttgaacaaga aacgcgccat gatgttgtag
      901 cctttactag acaagtttct gaaacgctag gtgaagaacg taagtgggta cattatggtt
      961 taacttctac tgatgttgta gatacagctt taagtttcgt tattaaacaa gcaaatgaca
     1021 ttattgaaaa agatttagaa agatttatcg acgttttagc tgaaaaagca aaaaattata
     1081 aatatacgtt gatgatggga cgtacacatg gagtgcatgc agaaccaact acatttggtg
     1141 tcaaaatggc attgtggtac acggaaatgc aacgtaactt acaacgtttc aaacaagtaa
     1201 gagaagaaat tgaagtaggg aaaatgagtg gtgcagtagg tacttttgct aacattcctc
     1261 ctgaaataga aagttatgtg tgtaaacatt taggtattgg cacagcgcct gtatcaacac
     1321 aaacattgca acgtgatcga catgcatact atattgcgac attagcatta atcgcgacgt
     1381 cactagaaaa atttgccgtt gaaattcgta accttcaaaa aactgaaaca agagaagttg
     1441 aagaagcatt tgcaaaaggt caaaaaggtt catctgcaat gcctcataaa cgaaatccaa
     1501 ttggttctga aaatatcaca ggtatttcaa gagtaattcg tggttatatt actacagctt
     1561 atgagaatgt gccattatgg catgaaagag atatttctca ttcttcagct gagcgtatta
     1621 tgttaccaga tgttacaata gcactagatt atgcattgaa tcgtttcacg aatattgtgg
     1681 accgtttaac tgtatttgaa gataatatgc gtattaacat agataaaaca tttggtctga
     1741 ttttctcaca acgtgtctta ttagcattaa ttaataaagg tatggttcgt gaagaagcat
     1801 acgacaaagt acaaccaaaa gcgatgacat cttgggaaac gaaaacacct ttccgtgaat
     1861 taatcgaaca agatgagtct attacaagtg ttttaacaaa agaagaattg gatgaatgtt
     1921 tcgatcctaa acatcatttg aatcaagttg acactatttt cgaacgcgct ggattagcat
     1981 aaaattaaat aaagtaacga ttcagattta ataaaatata aatcgctaca ctttaatagg
     2041 ttaatgcgtt aaaatgacat aaagaataaa attatagggg ttgtttcgat atgcaaattg
     2101 aaaaattacg aggtgcagcg ttagatgaat tgtttgatgc aatactaacg ttagaaaata
     2161 gagaagaatg ttaccaattt ttcgatgatt tgtgtactgt aaatgaaatt caatcactgt
     2221 ctcaaagatt acaagttgct aaaatgatta agcaaggtta tacctatgca acgattgaac
     2281 aagaatctgg agcatcgact gcaacgattt ctagagtgaa gcgatcatta caatggggta
     2341 atgatgctta tacaatgatt ttagatcgta tgaatattga aacaaatgaa taataaatga
     2401 acgataaaca atggttatct atctgcacta ataaggtaga taatcattgt tttttcacga
     2461 aaaaatttac agagtaaaag aacttaaatt tcatattaag tctttagaac tcgacactta
     2521 aaaatgctat aatcatatgt atgttaaaaa aggagtttcg gaaaatgtat gacattaaaa
     2581 aatggcgcca tatttttaaa ttagacccag ctaaacatat ttcagatgat gatttagatg
     2641 cgatttgtat gtctcaaaca gatgcaatta tgattggtgg aactgatgac gttactgaag
     2701 ataatgtcat tcatttaatg agcagagtaa gaagataccc attgccttta gtacttgaaa
     2761 tatcaaacat cgaaagtgta atgcctggtt ttgattttta ttttgtacct acagtactga
     2821 acagtacaga tgttgcattt cacaatggta cattattaga agcgcttaaa acatatggac
     2881 atagtataga ttttgaagaa gtaatatttg aagggtatgt cgtgtgcaat gctgatagca
     2941 aagtggcaaa acataccaaa gcaaatacag atttaacaac agaagattta gaagcatatg
     3001 cccaaatggt caatcatatg tatcgattac cggttatgta tatagagtat agtggcgttt
     3061 atggcgacgt atcaaaggtt caagctgtct cagaatatct aacagaaacg caactttttt
     3121 atggtggcgg tatttcctca gaacagcaag cgacagagat ggcagctatt gcagatacaa
     3181 ttatcgtcgg tgatattatt tataaagata ttaaaaaagc tttaaaaaca gtaaaaataa
     3241 aggagtctag taaatgaatg cgttattaaa tcatatgaat acagagcaaa gtgaagctgt
     3301 aaagacaaca gaaggaccat tgttaattat ggcaggtgct ggttcaggga agacacgtgt
     3361 tttaacacat agaattgctt atttattaga cgaaaaagat gtctcaccat acaatgtttt
     3421 ggctattact tttacaaata aagctgcaag agaaatgaaa gaacgtgttc aaaaattagt
     3481 aggtgatcaa gcagaagtta tttggatgtc aacattccac tcaatgtgtg ttcgtatttt
     3541 acgtcgtgat gcagatcgaa ttggtataga acgcaatttt acgataattg atcctacaga
     3601 ccaaaaatct gttattaaag acgtcttaaa aaatgaaaat attgatagta aaaagtttga
     3661 accacgtatg tttatcggtg cgatcagtaa tttgaaaaat gaacttaaaa cacctgcaga
     3721 tgctcaaaaa gaagccacag attatcactc gcaaatggta gcaacggttt atagtggata
     3781 tcaacgccaa ttgtcacgta atgaagcgtt agattttgat gaccttatta tgacaacgat
     3841 taacttattt gagcgtgtac cagaagttct agaatattat cagaacaaat tccaatatat
     3901 tcatgtggat gagtatcaag atactaataa agcacaatat actttagtta aattattagc
     3961 aagtaagttt aaaaacttat gtgttgtagg tgactcagat cagtcaattt atggttggcg
     4021 tggtgctgat attcaaaata tcttatcatt tgaaaaagac tacccagaag cgaatacaat
     4081 ctttttagag caaaattatc gttcgacgaa aacgatttta aatgcggcta acgaagtgat
     4141 taaaaataat tctgaacgta agccaaaagg actgtggact gcaaatacga atggtgagaa
     4201 aattcattac tatgaagcaa tgacagaacg tgatgaagcg gaatttgtaa tacgagaaat
     4261 tatgaagcat caacgtaatg gtaagaaata tcaagatatg gcaattttat atagaacaaa
     4321 tgcacaatca cgtgtacttg aggaaacatt catgaaatct aatatgccat acacaatggt
     4381 tggtggccaa aagttctatg accgtaaaga aattaaagat ttattaagtt atttgcgtat
     4441 aattgccaat agtaatgatg acattagttt gcaacgtatt attaatgttc caaaaagagg
     4501 tgtaggtcct tcatctgttg aaaaagttca aaactatgca cttcaaaaca atatcagtat
     4561 gtttgatgca cttggagaag ctgattttat cgggttgtca aaaaaggtga cacaagagtg
     4621 tcttaatttt tacgagttga tccaaagctt gataaaagaa caagaatttt tagaaattca
     4681 tgaaatagtt gatgaagtat tacaaaagtc tggctaccga gaaatgcttg aacgtgaaaa
     4741 tacactagaa tctcgaagta gattagaaaa catcgatgaa tttatgtcag taccaaaaga
     4801 ctatgaggaa aataccccat tagaagaaca gtcattaatt aactttttaa cggatttatc
     4861 gttagtagct gatattgatg aggcagatac tgaaaatggc gtaacactaa tgacgatgca
     4921 ctcggctaag ggccttgaat ttccaatcgt ctttataatg gggatggaag aatctttatt
     4981 cccacatatt agagcgatta agagtgaaga tgatcatgaa atgcaagaag aacgtcgtat
     5041 ttgttatgta gcaattacaa gggctgaaga ggtgttatat atcactcatg cgacatcaag
     5101 aatgttattt ggtcgccctc agtcaaatat gccatctagg tttttaaagg aaattccaga
     5161 atcactatta gaaaatcatt caagtggcaa acgacaaacg atacaaccta aggcaaaacc
     5221 ttttgctaaa cgtggattta gtcaacgaac aacgtcaacg aaaaaacaag tatcgtcatc
     5281 tgattggaat gtaggtgaca aagtgatgca taaagcctgg ggagaaggca tggtgagtaa
     5341 tgtaaacgag aaaaatggct caatcgaact agatattatc tttaaatcac aagggccaaa
     5401 acgtttgtta gcgcaatttg caccaattga aaaaaaggag gattaaggga tggctgattt
     5461 atcgtctcgt gtgaacgagt tacatgattt actaaatcaa tacagttatg aatactatgt
     5521 agaggataat ccatctgtac cagatagtga atatgacaaa ttacttcatg aactgattaa
     5581 aatagaagag gagcatcctg agtataagac tgtagattct ccaacagtta gagttggcgg
     5641 tgaagcccaa gcctctttca ataaagtcaa ccatgacacg ccaatgttaa gtttagggaa
     5701 tgcatttaat gaggatgatt tgagaaaatt cgaccaacgc atacgtgaac aaattggcaa
     5761 cgttgaatat atgtgcgaat taaaaattga tggcttagca gtatcattga aatatgttga
     5821 tggatacttc gttcaaggtt taacacgtgg tgatggaaca acaggtgaag atattaccga
     5881 aaatttaaaa acaattcatg cgataccttt gaaaatgaaa gaaccattaa atgtagaagt
     5941 tcgtggtgaa gcatatatgc cgagacgttc ttttttacga ttaaatgaag aaaaagaaaa
     6001 aaatgatgag cagttatttg caaatccaag aaacgctgct gcgggatcat taagacagtt
     6061 agattctaaa ttaacggcaa aacgaaagct aagcgtattt atatatagtg tcaatgattt
     6121 cactgatttc aatgcgcgtt cgcaaagtga agcattagat gagttagata aattaggttt
     6181 tacaacgaat aaaaatagag cgcgtgtaaa taatatcgat ggtgttttag agtatattga
     6241 aaaatggaca agccaaagag agtcattacc ttatgatatt gatgggattg ttattaaggt
     6301 taatgattta gatcaacagg atgagatggg attcacacaa aaatctccta gatgggccat
     6361 tgcttataaa tttccagctg aggaagtagt aactaaatta ttagatattg aattaagtat
     6421 tggacgtaca ggtgtagtca cacctactgc tattttagaa ccagtaaaag tagctggtac
     6481 aactgtatca agagcatctt tgcacaatga agatttaatt catgacagag atattcgaat
     6541 tggtgatagt gttgtagtga aaaaagcagg tgacatcata cctgaagttg tacgtagtat
     6601 tccagaacgt agacctgagg gtgctgtcac atatcatatg ccaacccatt gtccaagttg
     6661 tggacatgaa ttagtacgta ttgaaggcga agtagcactt cgttgcatta atccaaaatg
     6721 ccaagcacaa cttgttgaag
//
LOCUS       DALMNS010000122         6668 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.122, whole genome shotgun sequence.
ACCESSION   DALMNS010000122 DALMNS010000000
VERSION     DALMNS010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6668)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6668)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6668
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.122"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..272
                     /locus_tag="O6Y56_002364"
     CDS             <1..272
                     /locus_tag="O6Y56_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000669709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MAP domain-containing protein"
                     /protein_id="HDB5575600.1"
                     /translation="NKFENIVSNEFVFYNASKITINDLSIKLKSAMANDQGITKHDIG
                     LAERAVYKVYFKNGSSKYVDLKTEYKDGKVFKATDIKKVDIELKF"
     gene            complement(551..1837)
                     /locus_tag="O6Y56_002365"
     CDS             complement(551..1837)
                     /locus_tag="O6Y56_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDB5575601.1"
                     /translation="MNPLAQSLNEQLQQSNATAFAMLSDLGQNMFYPKGILSQSAEAK
                     STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRD
                     NPELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANL
                     QTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHEEVTTIVNAIKA
                     LADKGTKVIAVVDDAYYGLFYEDVYTQSLFTALSNLNSNAILPVRLDGATKEFFAWGF
                     RVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQN
                     IQTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVHDVDPEELRKHLIEKYSIG
                     VIALNATDIRIAFSCVEKEDIPHVFDSIAKAIDDLR"
     gene            2037..2135
                     /locus_tag="O6Y56_002366"
     CDS             2037..2135
                     /locus_tag="O6Y56_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575602.1"
                     /translation="MMWWQEGMMTLITGGLLIIFRLWLELKWKNKK"
     gene            2377..2553
                     /locus_tag="O6Y56_002367"
     CDS             2377..2553
                     /locus_tag="O6Y56_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575603.1"
                     /translation="MKHLTKIFVVLAIILFIVGYYLQATNHESQGIKLLLAAIMFMIC
                     AFISRSNDRRKNNK"
     gene            3094..3474
                     /locus_tag="O6Y56_002368"
     CDS             3094..3474
                     /locus_tag="O6Y56_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDB5575604.1"
                     /translation="MKIILKNNSDFPIYEQIKQQVKQNILKGHVAPGEHLPSMRELAK
                     DLQVSLITTKRAYEDLEKDGFVTTIRGKGTFVKEQDSSILKEKQFFTIENLVKELVNE
                     AQAIEMSLEELQDILTFIYEEESS"
     gene            3471..4367
                     /gene="pmtA"
                     /locus_tag="O6Y56_002369"
     CDS             3471..4367
                     /gene="pmtA"
                     /locus_tag="O6Y56_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin export ABC transporter
                     ATP-binding protein PmtA"
                     /protein_id="HDB5575605.1"
                     /translation="MNAIELSNVNYSSDQFNLKNISFKVPQGFVTGFIGRNGAGKTTI
                     IRLIMDLYQPQTGVIRVLEEDMALNPIELKNRIGFVYAENYFNERWTTKQLEKMIAPF
                     YRKWDHQVFEFYLEKFDLPINKSIKTFSTGMKMKLSLAVAFSHHAELYIFDEPTSGLD
                     PLARNELLEIIQQELIDENKTIFMSTHIISDLEKIADYIIHLSDGEVILNGSKEQLLQ
                     RYQVVSGAIEDLDDELASLLIFEEHKRTGFIGLTEHAQVFKEILGHKVNITTPSIENL
                     MVYLEKRKPKYHENIKLMEEGF"
     gene            4368..5048
                     /gene="pmtB"
                     /locus_tag="O6Y56_002370"
     CDS             4368..5048
                     /gene="pmtB"
                     /locus_tag="O6Y56_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin export ABC transporter
                     permease subunit PmtB"
                     /protein_id="HDB5575606.1"
                     /translation="MKALLIRNFKLRRYTLIIYVLLLTLYPFYIMLDSTKFFYLLQSF
                     ISPTILIIWILDAGHLFRLNRRLGGNDSYYFYMSLPVSKKQLLNANYITCIVLTLIGT
                     LVISLYAYEADVIEPNSIYFSTAYAFVISNFLSIPIAFSQFTELRRVKVPYGIYVFTI
                     IILVPFLFSIAIVLVNYFVLSQSSFPDLYSYVLNIGFLIISIVILIVNYFKQLNKINT
                     RKFKGGSR"
     gene            5045..5917
                     /gene="pmtC"
                     /locus_tag="O6Y56_002371"
     CDS             5045..5917
                     /gene="pmtC"
                     /locus_tag="O6Y56_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin export ABC transporter
                     ATP-binding protein PmtC"
                     /protein_id="HDB5575607.1"
                     /translation="MKLEHITKKYGSNVVLNDIDFDFGDSRIVGLIGKNGVGKTTVMK
                     VMNGNIIKFDGKVDIDNADNIGFLIEHPKLYDNKSGLYNLKLFAQVLGKGFDKAYTDK
                     IIDAFGMRPYIKKKVKKYSMGMKQKLAIAVSLMNKPKFLILDEPTNGMDPDGSIDVLT
                     TIKSLVNELDMRILISSHKLEDIELICDRAVFLRDGHFVQDVNMEEGVASDTTIVTVD
                     HKDFDRTEKYLAEHFQLQNVDKADGHLMIDAQKNYQVILKALSELDIYPKYIETRKSS
                     LRDTYFNINQRGDK"
     gene            5917..6657
                     /gene="pmtD"
                     /locus_tag="O6Y56_002372"
     CDS             5917..6657
                     /gene="pmtD"
                     /locus_tag="O6Y56_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol-soluble modulin export ABC transporter
                     permease subunit PmtD"
                     /protein_id="HDB5575608.1"
                     /translation="MRILNLVKYDLYSVFKSPLTYLAILVVSSLIATQSILMANSMDN
                     PKHIIVYGSVFAAAKWLLLIIGLMFVVKTITRDFSQGTIQLYMSKVKTRVGYIISKTI
                     SIILISILFALIHYVILIVVQASSNGKNLAFSKYVDNLWFFLIFLLFFGLFLFLITLA
                     SQKTAMIFSLGVFLVLIVPFIKPFITFIPRYGDKVLDAFDYIPFAYLTDKMISSNFDF
                     SNWQWVISLGSIVIFFILNILYVAKKDI"
BASE COUNT         2306 a          890 c         1131 g         2341 t
ORIGIN      
        1 taaataaatt tgaaaacata gtttcaaatg aatttgtgtt ctataatgca agtaaaatta
       61 caattaatga cttaagtata aagcttaaat cagcaatggc aaacgatcaa gggattacta
      121 aacatgacat aggacttgct gaacgcgcag tgtataaagt gtattttaaa aatggttcgt
      181 caaaatatgt agacttaaaa actgagtata aagatggaaa agtatttaaa gcaactgaca
      241 ttaagaaagt agatattgaa cttaaatttt aatctttaat tttataataa ggcatctcac
      301 aatcgtgggg tgccttttac atttgtagag atgtgatgct tgaatgcttg aagtgatttg
      361 ccaaaagtta tataaatttg taccaaataa attaaatttt gttaggaaag atgtataaaa
      421 ctaattaggt atagtgtttg acaagttgct gaataaaata tatcttatga tgctttgaaa
      481 gaaggaataa ttttaaaaat aaaaaaccaa taatccgagt catactcatc agattattgg
      541 ttgaaattaa ttatcttaag tcatcaattg ctttagcaat tgaatcaaat acatgtggga
      601 tatcttcttt ttctacacag ctaaacgcaa tacgaatatc tgttgcatta agtgcaataa
      661 caccaattga atatttttca attaaatgtt tacgaagttc ttcagggtca acatcatgaa
      721 cttttattgc cataaagtac ccagagttaa agtcataggc ttgccaatgt gaatgatatt
      781 gatcagcata gacaacttcc ttagtgactt catagcgttc ttttaatgtt tgaatatttt
      841 gttcgatttc tttatcgaat tgtttattat tttttaatac atgcttaaca gcgctttgtg
      901 ttggaagagg tccactagaa atgttacttc gtataagacc ttttactttg gcttctaaaa
      961 cttctttagt tgtttgatca gacgttccaa atgtcataaa tccaacacgg aatccccatg
     1021 cgaaaaattc ttttgttgca ccatctaaac gaacaggtaa tattgcattt gaatttaaat
     1081 tagataatgc agtaaataat gattgagtat acacatcttc atagaataaa ccatagtatg
     1141 catcatctac cacagctata acttttgtcc ctttatcagc taatgcttta attgcgttga
     1201 caatggtagt cacttcttca tgtgtaggtg tgtaacctgt cggattatta ggataattta
     1261 aaatcataat gactttatct ttattgtatg attgtaaagc ttctactagt gaatcagtag
     1321 tataatgtcc gtctttatca aagataggat atgtttgaag gtttgcacca tttctcgtat
     1381 tgaaaacaag tttgtaatta ccccaattat gctctggtaa caagatagtg tcatcttgat
     1441 ttacaaataa atcgccaact aaagataaac catgtgttaa tgcattcgta acaattggtc
     1501 gtgacatgtt gtcgattgat agctctggat tgtcacgcaa cattttttgt tgccataaat
     1561 cacgtaattc ttcgatgcct tgtggtggcg cataagggaa tatttcatct ggagttaaat
     1621 cattaaacat tgcatctaaa gatgatgcaa acatttttcc gtctttgttt gtcgccatac
     1681 ctatcgttgc attatatgtt gtactctttg cttcagcaga ttgagataaa atgccttttg
     1741 gataaaacat attttgacct aagtcagata acattgcaaa ggcagttgca tttgactgtt
     1801 gaagttgttc atttaagctt tgggctaaag gattcattat tgcttaacct ctctttaaaa
     1861 aaattgtatg cctatatatt atcttcaatt ataccaaaga taaagtgttg ttggtgaatt
     1921 aacgaataat atgtaaaatc cgctaccaaa atacgaacat atgttctgct tttgtgttag
     1981 aataggtgta ggtcatcctt cagtatgata ctttagtcga acggaggtgt agtgtaatga
     2041 tgtggtggca agaagggatg atgacactta ttacaggtgg cttactaatt atttttcgac
     2101 tttggttaga actgaaatgg aaaaataaaa aatgatccta cacacataaa taaccccaag
     2161 tctgctggta ccagacttgg ggttgtgtag tataattcag tggatacact taaataatat
     2221 cattgaacac aatatatcgc aatcaataat cattttaaat gaatggtttt gttgctctac
     2281 tttagttgaa agtaattagt cctttgagct gttaatattt aatagcttat taaaaaactt
     2341 atatttgtta taatatcgat gttgaggtga taaaagttga aacatctaac gaaaatattt
     2401 gtagtacttg caattatttt atttattgtt ggttattatt tacaagcaac taatcatgaa
     2461 agccaaggta taaaattatt attagcagcg attatgttta tgatttgtgc ttttataagt
     2521 agaagtaatg atcgacgtaa aaataataaa tagaattgac tgtttaaaac gattgtttat
     2581 gttgacgcta cgattgtcac gtagggatta aagacattcg ttttagcagt cttttttagt
     2641 tacaacaaaa gttgagtatt gggtatcaat caatgttcaa ggcactacaa agttatattg
     2701 gcagtagttg actgcggggc cccaacatag aagctgtcgg aaagtcagct tacaacaatg
     2761 tgcaagttgg cggggcccca gcacagagaa attctacaga caatgcaagt tgaggtgccc
     2821 caaacataaa gaaatacttt ttctttagaa attagtcttt cttatgcatg agtttcgctc
     2881 atgcattcct atttttaagg acacattagc tgtggctaat gcgtacgaac cactacaaaa
     2941 taaatcatag gtggttcttt atcatctctg tttaactccc aactatgcta ttaatttgtt
     3001 agtgaagcag ttaaaagaaa aaagaatgta tatttacaaa actgtgtata ttgtgtatat
     3061 tgtatatata cagaaggtga tagggggacg ttgatgaaaa taattttaaa aaacaatagt
     3121 gattttccga tttatgaaca gattaagcaa caagtaaaac aaaatatttt aaagggacat
     3181 gttgctcctg gagagcattt gccatcaatg agggaacttg ccaaagatct tcaagtaagt
     3241 ttgattacta ccaaacgtgc ttatgaagat ttagagaaag acggttttgt tacaacaatt
     3301 agaggaaaag ggacctttgt taaggaacaa gatagttcta ttttaaaaga gaaacaattt
     3361 tttaccattg aaaatttggt taaagaattg gttaacgaag cgcaagccat cgaaatgtca
     3421 cttgaggaac ttcaagatat tttaacgttc atttatgagg aggaatcatc atgaatgcca
     3481 tagaattaag taatgttaat tattcaagtg atcagtttaa tttaaagaat atctctttca
     3541 aagttcctca aggatttgtc actggtttta ttggtagaaa tggcgctggt aaaaccacaa
     3601 taataaggtt aattatggat ttgtatcaac cacaaactgg tgttattaga gtattagaag
     3661 aggatatggc tctcaatccg atagagttaa agaatagaat tgggtttgtt tacgctgaaa
     3721 attattttaa tgagagatgg actacgaagc aacttgaaaa aatgattgcc cctttttatc
     3781 gtaaatggga ccatcaagta tttgaatttt atcttgaaaa gttcgattta ccaatcaata
     3841 aatcaataaa aacattttcg actggcatga aaatgaaatt atcactagca gttgcatttt
     3901 cacatcatgc tgaattgtat atttttgatg agcctacttc aggtcttgat cccttagcta
     3961 gaaatgagct attggagata attcagcaag aattaattga tgaaaataaa acaatattca
     4021 tgtcgacaca cattatctca gatttagaaa aaatagctga ttatatcatt cacttaagtg
     4081 acggtgaagt tatcttaaat ggttcaaaag aacaactgtt acaaagatat caagttgtga
     4141 gtggtgcaat tgaggacctt gatgatgaat tagcatcttt acttattttt gaagaacata
     4201 agcgtacggg atttatagga ttaacagaac atgcgcaagt atttaaagaa attttaggtc
     4261 ataaagtgaa tatcactaca ccttctattg agaacctaat ggtttatctt gaaaagagaa
     4321 aacctaaata tcatgaaaac atcaaattga tggaagaagg tttttaaatg aaggcattgt
     4381 taattaggaa ttttaaatta cgacgatata cacttatcat ctatgttcta ttattaacct
     4441 tatatccttt ttatataatg cttgactcaa caaagttctt ttacttattg caatctttta
     4501 taagtccaac aatattgatt atttggattt tagatgctgg tcacttattt agactcaatc
     4561 gtagattagg tggtaatgat tcatattatt tttatatgag tttaccagtg tcaaaaaaac
     4621 aattgcttaa tgccaactat attacatgca ttgttttaac attaattgga acgcttgtta
     4681 ttagtttata tgcttatgaa gcagatgtga ttgaaccaaa ttcaatctat ttttcaactg
     4741 catatgcatt tgtcatatct aacttcttgt ctataccaat tgcatttagt caatttacag
     4801 aattgcgtag agtcaaagtg ccatatggta tatacgtgtt tactattatc attttagttc
     4861 catttttatt ttcaattgca atagtgttgg tgaattattt tgttctaagt caatcatcat
     4921 tcccagatct atattcatat gttttaaata ttggttttct aattataagc attgttatac
     4981 ttattgttaa ttattttaaa cagctcaata aaataaatac tagaaaattt aaaggaggca
     5041 gtcgatgaaa ttagaacata ttacaaaaaa atacggctca aatgtcgttt taaatgatat
     5101 tgattttgac tttggcgata gtagaattgt cggattaata ggaaaaaacg gtgttggtaa
     5161 aacaaccgtt atgaaagtaa tgaatggtaa tattattaaa tttgatggaa aagtagatat
     5221 tgataatgca gataatatcg gttttttaat tgagcatcct aaattatatg ataataaatc
     5281 aggattgtat aacttgaaat tatttgcaca agtattaggt aagggttttg ataaagcata
     5341 cacagacaaa attatagatg catttggtat gagaccttat attaaaaaga aagttaagaa
     5401 atattcaatg gggatgaagc aaaagttagc aattgcagta tctttaatga ataaacctaa
     5461 atttttaata ttggatgagc ctacaaatgg tatggatcca gatggctcaa ttgatgtgct
     5521 gactacaatt aagtctctag taaatgaact tgatatgaga attcttatat caagtcataa
     5581 gttagaagat attgaattaa tttgtgatag agctgtattt ttaagagacg gacattttgt
     5641 tcaagatgta aacatggagg aaggtgttgc atctgacaca acgatagtta ctgttgatca
     5701 taaagacttt gatagaactg aaaaatatct tgcagagcat ttccaattac aaaatgtcga
     5761 caaagcagac ggacatttaa tgatcgatgc acaaaaaaat tatcaagtta tactaaaagc
     5821 attatctgaa ttagatattt atccgaaata tattgaaaca cgtaaaagtt cattgcgtga
     5881 tacgtacttc aatataaatc aaagaggtga taaataatga gaattttaaa tttagttaag
     5941 tatgatcttt atagtgtttt taaaagtcct ttaacatatt tagcgatact tgtcgtatct
     6001 agtttgattg caactcaaag tatacttatg gcaaattcta tggataatcc gaaacatatt
     6061 attgtctatg gatctgtatt tgctgcagca aaatggttat tgttaataat tggattaatg
     6121 tttgttgtta agacaattac gcgtgatttt tcacaaggta caattcaact atatatgagt
     6181 aaagttaaaa cacgcgttgg atacattatt tcgaaaacaa tttcaattat tttaatttca
     6241 atattatttg cattaattca ttatgtgatt ttgattgttg tgcaagcatc tagcaatgga
     6301 aaaaatttgg cgttttctaa atatgtagat aatttatggt tcttcctaat ctttttacta
     6361 ttctttggct tgtttttatt cttaatcaca cttgcatcac aaaaaacagc aatgatattt
     6421 tcattaggtg tatttttagt actcattgta ccgtttatta aaccttttat tacatttatc
     6481 ccaagatacg gtgataaagt tttagatgct tttgattata tcccttttgc ttacttaact
     6541 gataaaatga ttagctctaa ctttgatttt agcaattggc aatgggtaat ttcattaggt
     6601 tctatagtga tattcttcat tttgaatatc ttatatgtcg ctaaaaaaga catttaataa
     6661 aaataatt
//
LOCUS       DALMNS010000123         6632 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.123, whole genome shotgun sequence.
ACCESSION   DALMNS010000123 DALMNS010000000
VERSION     DALMNS010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6632)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6632)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6632
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.123"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            504..2468
                     /locus_tag="O6Y56_002373"
     CDS             504..2468
                     /locus_tag="O6Y56_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1,6-bisphosphatase"
                     /protein_id="HDB5575609.1"
                     /translation="MTQITERELKKKYLDLLSQHFDTPEKLATEIINLESILELPKGT
                     EHFVSDLHGEYEAFQHVLRNGSGNVRAKINDIFKDKLSTKELNDLTALVYYPEDKLQL
                     IKCDFQNYGQLNVWYITTIEHLIQLIKYCSSKYTRSKLRRALPEQYVFIVEELLYKNN
                     EFKNKKSYYETLVNQVIELKQADDLIIGLAYSVQRLVVDHLHVVGDIYDRGPQPDKIM
                     DTLINYHSLDIQWGNHDVLWVGAYAGSKVCLANLLRICARYDNLDIVEDAYGINLRPL
                     LTLAEKYYDADNPAFKPKKRPDKHERLTQREESQITKIHQAIAMIQFKLEIPVIKRRP
                     NFEMDERLVLEKVNYDTNEITVYGKTYPLKDTCFQTVNRDNPAELLPEEEEVMNKLLL
                     SFQQSEKLRRHMSFLMRKGSLYLPYNGNLLIHGCIPVDENGEMESFEIDGHTYSGQEL
                     LDVFEYHVRKSFDEKENTDDLSTDLVWYLWTGKYSSLFGKRAMTTFERYFIADKASHK
                     EEKNPYYHLREDVNMVRKMLSDFGLNPDEGRIINGHTPVKEINGEDPIKAEGKMLVID
                     GGFSKAYQSTTGIAGYTLLYNSFGMQLVAHQQFNAKEKILSEGIDELSIKRIVDKELQ
                     RKKIRNTNKGKELQAQIDILKMLMHDRYLD"
     gene            2811..3890
                     /locus_tag="O6Y56_002374"
     CDS             2811..3890
                     /locus_tag="O6Y56_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575610.1"
                     /translation="MRILKESIIVAFAFVGVVVGAGFATGQEIFQFFTSHGAYSISGI
                     IVTGLLITLGGMIVMHTGHHLKSKNHSDSINYFLYPSIARGFDIILTMFMLSLAIIMT
                     AGGASTIHQSFNLPYWLSALILVAFILATLFLKFDRLIAVLGGVTPFLIAIVIMIAVY
                     YFTTSHLDFTAANNDAQIHKQKSLSPGWWFDAINYASLQIAAAFSFLSVMGSKVKYRD
                     STLYGGLIGGLIITFLLMMINLGLISQFDKIKHVDLPTLKLATQMSPSIGIIMSVIMI
                     LVIYNTVVGLMYAFASRFSVPFSRRYFIIIITMAVITYISTFIGFISLIGKVFPIMGL
                     FGFILLIPVLYKGLIKRITGKSHID"
     gene            complement(3995..4588)
                     /locus_tag="O6Y56_002375"
     CDS             complement(3995..4588)
                     /locus_tag="O6Y56_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDB5575611.1"
                     /translation="MEHIFREGQNGAPTLILLHGTGGDEFDLLPLGEALNENYHLLSI
                     RGQVSENGMNRYFKRLGEGVYDEEDLAFRGQELLTFIKEAAERYDFDIEKAVLVGFSN
                     GSNIAINLMLRSEAPFKKALLYAPLYPIEVTSTKNLSDVSVLLSMGKHDPIVPLAASE
                     QVINLFKTRGAQVEEVWVNGHEITETGLTAGQQILGK"
     gene            complement(4610..5578)
                     /locus_tag="O6Y56_002376"
     CDS             complement(4610..5578)
                     /locus_tag="O6Y56_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000183732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HDB5575612.1"
                     /translation="MTNNHELLGIHHVTAMTDDAERNYKFFTEVLGMRLVKKTVNQDD
                     IYTYHTFFADDVGSAGTDMTFFDFPNITKGQAGTNSITRPSFRVPNDDALMYYEQRFD
                     EFGVKHEGIQELFGKKVLPFEEVDGQVYQLISDELNEGVAPGVPWKNGPVPVDKAIYG
                     LGPIEIKVSYFDDFKNILETVYGMTTIAHEDNVALLEVGEGGNGGQVILIKDDKGPAA
                     RQGYGEVHHVSFRVKDHDAIESWATKYKEVGINNSGIVNRFYFEALYARVGHILIEIS
                     TDGPGFMEDEPYETLGEGLSLPPFLENKREYIESEVRPFNTKRQHD"
     gene            complement(5656..6090)
                     /locus_tag="O6Y56_002377"
     CDS             complement(5656..6090)
                     /locus_tag="O6Y56_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDB5575613.1"
                     /translation="MDRTKQSLNVFVGMNRALDTLEQITKEDVKRYGLNITEFAVLEL
                     LYNKGPQPIQRIRDRVLIASSSISYVVSQLEDKGWITREKDKDDKRVYMASLTEKGQS
                     QMADIFPKHAETLRKAFDVLTKDELTILQQAFKKLSAQSTEV"
     gene            6316..6600
                     /locus_tag="O6Y56_002378"
     CDS             6316..6600
                     /locus_tag="O6Y56_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDB5575614.1"
                     /translation="MSNLEIKQGENKFYIGDDENHALAEITYRFVDNNEINIDHTGVS
                     DELGGQGVGKKLVKAVVEHARENHLKIIASCSFAKHMLEKEDSYQDVYLG"
BASE COUNT         2100 a         1237 c         1063 g         2232 t
ORIGIN      
        1 tcccagcctg tttaatatag tgcgttgctt ttctcattta ttaggtgaaa acattctcat
       61 atattaagta aagcgacagt cataattatc aattcctttc ataagaatta actgttaact
      121 agagtttaca ccacctttca aaataccccc acttgtaatg tacaaaatat gctcacttaa
      181 acgataatcg tatctctgcc aagctatttc aactctgctt taatataaat tattctccag
      241 tatgggatgc ttatatctct atcatgatat ttcaacgtcg cttcaacaac tttatcattt
      301 catatttatg cgggtacact tcaacgctac taatatgaat gatacaacca cagattctca
      361 acactaaaat tcacaatatg tttactctat ttttatcaat tcaagcatac ttattgaaaa
      421 atgttaacgt tttcttgata atcattgtaa gcgtattaat tttacaaacc aatgattgaa
      481 atatactaca ggagtgacac acaatgactc aaattactga aagagaatta aaaaagaaat
      541 atttggattt attatctcaa catttcgata ctccagaaaa gcttgcgact gaaattatta
      601 atttagaatc tattttagaa ttacctaaag gtacggagca tttcgtcagc gatttacatg
      661 gtgaatatga agctttccaa cacgtattac gcaacggttc tgggaacgtg cgagcgaaaa
      721 tcaatgatat tttcaaagac aagttatcaa cgaaagaact taacgatttg actgcccttg
      781 tttactatcc agaagacaaa ttgcaactta ttaaatgcga ttttcaaaat tatggacaat
      841 taaatgtttg gtatattacg acgattgaac atctcattca gctaattaaa tattgttctt
      901 caaaatatac gcgttcaaaa cttcgacgtg ccttgccgga gcaatacgtt ttcatcgtag
      961 aagagttatt atataagaac aacgaattca aaaataaaaa atcttactac gaaacacttg
     1021 taaatcaagt gattgagctt aagcaagcgg atgatttaat tatagggctt gcgtattctg
     1081 tacaacgctt agtcgtcgat catttacacg ttgtcggtga tatttatgat cgtggcccgc
     1141 aaccagataa aatcatggac acgctgatta attatcattc tctggatatt caatggggta
     1201 atcatgatgt gctatgggtt ggtgcttatg cagggtctaa agtatgttta gctaatttac
     1261 tacgtatttg tgcacgttat gacaatctag atatcgttga agatgcatac ggtattaatt
     1321 taagaccttt gctaacatta gccgaaaagt actatgatgc agataatcct gcttttaaac
     1381 ctaaaaaaag acctgacaaa catgaacgtt taacacaacg cgaagaaagt cagattacta
     1441 aaattcatca agctattgcg atgattcaat tcaaactgga aataccggtt attaagcgcc
     1501 gtccaaactt tgaaatggac gaacgacttg tacttgaaaa agttaattat gatactaatg
     1561 aaataacagt atacggaaaa acatatccat taaaagatac atgcttccaa actgttaacc
     1621 gtgataaccc agcagaatta ctacctgaag aagaagaagt catgaacaaa ctattattgt
     1681 cattccaaca atctgaaaaa ttacgtcgtc atatgtcttt cttgatgcgt aaaggctctc
     1741 tttacttacc atataatggc aatttactca ttcatggttg tattccagtt gatgaaaatg
     1801 gtgagatgga atcatttgaa attgatggtc atacttacag cggccaagaa ttattagatg
     1861 tgtttgagta tcatgtccgt aaatcatttg atgaaaaaga aaatactgat gatttatcga
     1921 cggatttagt ttggtattta tggactggga aatattcgtc attatttggt aaacgtgcga
     1981 tgactacgtt tgaacgatac tttattgcag ataaagcttc tcataaagaa gaaaagaatc
     2041 cgtactatca tcttcgtgaa gatgtgaata tggttcgtaa aatgctcagt gatttcggat
     2101 taaacccaga tgaaggacgc attattaatg gtcacacacc agtgaaagaa attaatggcg
     2161 aagatcctat caaagctgaa ggaaagatgc ttgtcattga tggcggcttt tcaaaagctt
     2221 atcagtcaac aactggcatt gcaggctata cattgttgta taattcattc ggaatgcaac
     2281 tcgttgcaca tcaacaattt aatgcaaaag aaaaaattct ttccgaaggt atcgacgaac
     2341 tgtcaattaa acgtattgtt gataaagaat tacaacgtaa aaaaatccgc aatacaaata
     2401 aaggtaaaga gcttcaagct caaatagata ttttgaaaat gttgatgcat gatcgttact
     2461 tagactaaag acaacatttg gtgcatgtat cgtgcactta tttagtggtg ctgtgtttac
     2521 gcattggcta cgcaaatgcg atggtaaata ggcgacctag ctacaccgaa aaaatcccct
     2581 cactattgcg agtagtgagg ggattggcgt atctatgcta gttcctgtta actgtattat
     2641 aacaacttta cagtaaaaaa atgcaaaatt aactaataaa ttaataaaat gaccgacgtc
     2701 cttgcttcta ctccaattta acaaaatact atattagtac tatatttttc attaacatgt
     2761 atgttacatt ttctatatta cttaaaatta cgaagggaca tttttaaatc atgcgtatct
     2821 taaaagagtc cattattgtg gcatttgcct ttgtgggtgt tgtcgttggt gccggctttg
     2881 ctactggtca agaaattttc cagtttttca caagtcatgg cgcatatagc atttcaggca
     2941 ttattgtgac aggactattg attactttag gtggaatgat tgtcatgcat acaggtcatc
     3001 atctaaagtc taaaaatcat tctgattcaa ttaactattt cttatacccc tctattgcaa
     3061 gaggttttga tattattttg acaatgttta tgttgtctct agctattatt atgactgcag
     3121 gtggcgcttc aaccattcat caaagtttca acttaccgta ttggctgagc gcactcatat
     3181 tagttgcctt tattttagca acactgtttc taaaattcga tcgtttaatt gctgtgcttg
     3241 gcggtgttac cccattttta attgcgattg tcattatgat tgcggtgtac tatttcacaa
     3301 cgagtcatct tgattttact gccgctaata atgatgctca gattcataag cagaaatcat
     3361 tatcacctgg atggtggttt gatgcgatta actatgcaag cttgcaaatt gctgctgcct
     3421 tcagcttctt atcggtgatg ggtagtaaag ttaagtatcg tgactcaacg ttatacgggg
     3481 gcttgattgg cggtttaatc attacatttt tactcatgat gattaaccta ggtttgattt
     3541 ctcaattcga taaaattaaa cacgtcgatt tacctacatt aaaattagcg acacaaatgt
     3601 ctccgtcaat cggtattatt atgtctgtca ttatgatact tgtcatctac aatactgttg
     3661 ttggattaat gtatgcattt gcgtcacgtt tcagcgttcc atttagcaga cgttacttca
     3721 tcattattat tacaatggct gtcatcactt atattagtac atttatcggt ttcatttcat
     3781 taattggaaa agtattccct attatgggat tgttcggttt catcttactc atacctgtac
     3841 tctataaagg tttaattaag cgtattaccg gcaaatctca tatcgattaa aatatctata
     3901 ctattgtaaa atttagtaca acacttcaaa atcaaaaaag cgggcagatg aaaagtaaaa
     3961 atcttttcca tctgtccgct tcttaataga actgttattt cccaagtatt tgttgaccag
     4021 ccgttaatcc agtttctgta atttcatgac cattcaccca aacttcttcg acttgtgccc
     4081 cacgtgtctt aaacaagtta ataacttgtt cacttgcagc taatggcaca attggatcat
     4141 gtttccccat ggaaagcaac acactgacat ctgataaatt ctttgttgac gttacttcaa
     4201 tcggatataa cggtgcatat aacaatgctt ttttaaatgg tgcctctgaa cgcaacatta
     4261 agttaatcgc tatatttgat ccatttgaaa atccaacaag cacagccttt tcaatatcaa
     4321 aatcataacg ttcagcagct tctttaatga acgttaacaa ttcttgtccc cgaaatgcca
     4381 aatcttcttc atcataaaca ccttcaccaa gacgtttgaa ataacggttc atcccatttt
     4441 ctgaaacttg tcctctaata cttaacaagt gataattttc attcaatgct tcgcctaatg
     4501 gtaataaatc gaactcatca ccacctgtac catgcaataa tattagcgtc ggcgcaccat
     4561 tttgtccttc tctaaaaata tgttccatca caaatccctc tcattccaat taatcatgtt
     4621 gacgcttcgt attaaaaggt ctaacttccg attctatata ttctctttta ttttctaaaa
     4681 atggtggtaa ggataaccct tcgcctaatg tttcataagg ttcatcttcc ataaatcctg
     4741 gtccatctgt tgaaatttct attaaaatat gccccacacg tgcatataat gcttcaaaat
     4801 agaaacgatt aacgatgcct gagttgttaa tacctacctc tttatatttc gttgcccacg
     4861 attctattgc atcatgatct ttcacacgaa atgacacatg atgtacctca ccataacctt
     4921 gacgtgctgc tggcccttta tcatctttta ttaagattac ctggccacca ttgcctcctt
     4981 cgccaacttc aagtaatgcg acattatctt catgcgcaat agttgtcata ccgtaaacag
     5041 tctctaaaat atttttaaag tcgtcaaaat aacttacttt aatttcaatg ggtcctaatc
     5101 cataaatcgc tttatctact ggaaccggtc cattcttcca aggtacacca ggtgctaccc
     5161 cttcatttaa ctcatctgaa attaattgat acacttggcc atcgacttct tcaaatggca
     5221 acactttttt accaaacaat tcttgaatac cttcgtgttt aacaccaaat tcatcaaagc
     5281 gctgttcata atacattaat gcgtcatcgt taggaactct aaaagacggt cttgtaatgg
     5341 aatttgttcc tgcctgccct tttgtaatat ttggaaaatc aaagaacgtc atgtctgtac
     5401 ctgccgaacc tacgtcatct gcaaaaaatg tatgataagt ataaatatca tcttgattga
     5461 ctgtcttttt aactaaacgc atgcctaata cttctgtaaa aaatttataa ttacgttctg
     5521 catcatctgt cattgctgtg acatggtgaa tacctagtaa ttcatgatta tttgtcattt
     5581 tatataccct ctttatattt ttagtgtatt tatctcgaaa cagagatatt ttaatgtaaa
     5641 tttttagtgc acgccttaca cttctgtaga ttgtgcactt agtttcttaa acgcttgttg
     5701 taagattgtt aattcatcct ttgttaacac atcaaacgct tttcttaatg tctcagcatg
     5761 cttagggaaa atatctgcca tttgactttg acctttttca gttaaagaag ccatatatac
     5821 acgtttatca tctttatcct tttcacgtgt aatccaacct ttgtcctcta attgacttac
     5881 aacatatgaa atgctgctac ttgcaattaa tacgcggtct ctaatacgtt gaattggttg
     5941 cggaccttta ttataaagca actcgagcac tgcaaattca gtaatattta agccatatcg
     6001 ctttacgtct tcttttgtaa tttgctctaa tgtgtctaac gccctattca ttccgacaaa
     6061 gacattgagc gattgtttcg ttcgatccat atcatcacca acttttcaat ctatttcgat
     6121 ttcgagataa attatatagc tgaatgaatt taatgtcaag atacgtgttt tcatcttcat
     6181 ttcaaattgc gcttaataaa aacgactaca tagatgtggc aatgtcgtca catgactgtc
     6241 atgcaccttt gacttcgttt aagttaaaat agaataggga aatactataa tcaatcatga
     6301 taggagttga tatgtatgag taaccttgaa attaaacaag gcgagaacaa attctatatt
     6361 ggtgatgatg aaaatcatgc tttagctgaa atcacatacc gttttgtgga taataatgaa
     6421 attaacattg atcatacagg cgtatctgat gaactcggtg gtcaaggtgt tggcaaaaaa
     6481 ctagttaaag cagttgttga acatgctcgc gaaaatcatt taaaaatcat tgcctcatgt
     6541 tcatttgcca aacatatgtt agaaaaagaa gattcatatc aagatgtgta tcttggttaa
     6601 ataaatctcg cgatggtgcg ccagtgccat cg
//
LOCUS       DALMNS010000124         6381 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.124, whole genome shotgun sequence.
ACCESSION   DALMNS010000124 DALMNS010000000
VERSION     DALMNS010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6381)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6381)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6381
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.124"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..2019
                     /locus_tag="O6Y56_002379"
     CDS             <1..2019
                     /locus_tag="O6Y56_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
                     /protein_id="HDB5575615.1"
                     /translation="IEQAKERLAQALQDIKDLVKAKEDAKNKIKAIANAKRDQINSNP
                     DLTPEQKAKALKEIDEAEKRALQNVENAQTIDQLNRGLNLGLDDIRNTHVWEVDDQPA
                     VNEISEATPEQLLVNGELIVHRDDIITEQDVLAHINLIDQLTAEVIDTPSTATISDSL
                     SAKVEITLLDGSKVIVNVPVKVVEKELSVVKQQAIESIENAAQQKINEINNSVTLTLE
                     QKEAAIAEVNKLKQQAIDNINNAPDVHSVEEIQQQEQAHIEQFNPEQFTIEDAIQHMI
                     DEIKARTDLTDKEKQEAIAKLNQLKEQAIQAIQHAQSIDEITEQLEQFKAQMKAANPI
                     AKELAKRKQEAIGRIKDFSNEKMNSIRNSEIGSADEKQAAMNRINEIVLETIRDINNA
                     HTLQQVEAALNNGIARISAVQIVTSDRAKQSSSTGNESNSHLTIGYGTANHPFNSSTI
                     GHKKKLDEDDDIDPLHMRHFSNNFGNVIKNAIGVVGISGLLASFWFFIAKRRRKEDEE
                     EELEIRDNNKDSIKETLDDTKHLPLLFAKRRRKEDEEDVTVEEKDSLNNGESLDKVKH
                     TPFFLPKRRRKEDEEDVEVTNENTDEKVLKDNEHSPLLIAKRRKDKEEDVETTTSIES
                     KDEDVPLLLAKKKNQKDNQSKDKKSASKNTSKKVVAKKKKKKSKKNKK"
     gene            complement(2078..2479)
                     /locus_tag="O6Y56_002380"
     CDS             complement(2078..2479)
                     /locus_tag="O6Y56_002380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI family protein"
                     /protein_id="HDB5575616.1"
                     /translation="MAKINFDAATKGNPGISTCAIVIKEDEQHYTYIHELGEMDNHTA
                     EWAACIYALEHARELNVSNALLYTDSKLIADSIEAGYVKNANFKPYFDQIEIFEKSFD
                     LLFVKWIPREQNKEANQHAQQALYKLIKKNK"
     gene            complement(2721..3425)
                     /locus_tag="O6Y56_002381"
     CDS             complement(2721..3425)
                     /locus_tag="O6Y56_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="queuosine precursor transporter"
                     /protein_id="HDB5575617.1"
                     /translation="MYNEILGLVTFIATFVLMVLMYRFFGKQGLIAWVAIGTIIANIQ
                     VIKTVEIFGISATLGNVMFASIYLATDILNDIYGRRVAKRAVWLGFSSTLIMIIVMQL
                     SLHFIPAPEDMAQKALHAIFDVVPRIALGSIVAYIIGQHIDVFIFSLIKKVFSSDKTF
                     FIRAYGSTFLSSIIDTALFVAIAFIGSLPGTVVFEIFITTYVLKLASTVFNVPFGYIA
                     KSFYRKGKIDKLDQGY"
     gene            3670..3864
                     /locus_tag="O6Y56_002382"
     CDS             3670..3864
                     /locus_tag="O6Y56_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002439757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HDB5575618.1"
                     /translation="MSRILTFSEQNALAKIDNLMNTYCNQCPIKTRLRKLEGKTKAHH
                     FCINECSIGKEIKQLGNELQ"
     gene            3876..4127
                     /locus_tag="O6Y56_002383"
     CDS             3876..4127
                     /locus_tag="O6Y56_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU N-terminal domain-containing protein"
                     /protein_id="HDB5575619.1"
                     /translation="MQIISISETPNHNTMKITLSESREGMTSDTYTKVDDSQPAFIND
                     ILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFE"
     gene            4165..5289
                     /locus_tag="O6Y56_002384"
     CDS             4165..5289
                     /locus_tag="O6Y56_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor"
                     /protein_id="HDB5575620.1"
                     /translation="MEILRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEENQPEFINQ
                     LLSIDGITSIFHVMNFLAVDKAPKADWEVILPDIKAAFSDANKVLESVNEPQIDNHFG
                     EIKAELLTFKGIPYQIKLTSADQELREQLPQTYVDHMTQAQTEHDNIVFMRKWLDLGN
                     RYGNIEEVMDGVLEEVLATYPESQLPVLVKHALEENHATNNYHFYRHVSLDEYHATDN
                     WKTRLRKLNHFPKPTFEDIPLLDLALSDEKVPVRRQAIVLLSMIESKEILPYLYKGLR
                     DKSPAVRRTAGDCISDLGYPEALPEMVLLLDDPQKIVRWRAAMFIFDEGNAEQLPALK
                     AHINDNAFEVKLQIEMAISRIENGDEALGSVWKQMANRTI"
     gene            5305..5742
                     /locus_tag="O6Y56_002385"
     CDS             5305..5742
                     /locus_tag="O6Y56_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrxA/BrxB family bacilliredoxin"
                     /protein_id="HDB5575621.1"
                     /translation="MNAYDAYMKEIAQQMRGELTQNGFTSLETSEAVSEYMNQVKADD
                     TTFVVINSTCGCAAGLARPAAVAVATQNEHRPTNTVTVFAGQDKEATATMREFIQQAP
                     SSPSYALFKGQDLVYFMPREFIEGRDINDIAMDLKDAFDENCK"
     gene            6166..>6381
                     /locus_tag="O6Y56_002386"
     CDS             6166..>6381
                     /locus_tag="O6Y56_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HDB5575622.1"
                     /translation="MLNSFDAAYHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLS
                     KGFPLLTTKKVSFKLVATELLWFIKGDT"
BASE COUNT         2425 a          981 c         1091 g         1884 t
ORIGIN      
        1 attgagcaag caaaagagcg tttagcacaa gcattacaag acatcaaaga tttagtgaaa
       61 gctaaagaag atgcgaaaaa taaaataaaa gccatagcta atgcgaagcg tgatcaaatc
      121 aattcaaatc cagatttaac acctgagcaa aaagcaaaag cgctcaaaga aattgacgaa
      181 gctgaaaaac gagcactaca aaacgttgag aatgctcaaa ctatagatca attaaatcga
      241 ggattaaact taggtttaga tgacattaga aatacgcatg tatgggaggt tgacgatcaa
      301 cctgctgtaa atgaaatttc tgaagcaaca cctgaacaat tgcttgttaa tggtgaacta
      361 atcgtacatc gtgatgacat cattacagag caagatgttt tagcacacat taacttaata
      421 gatcagctta cagcagaagt tatcgataca ccatcaactg caacgatttc tgatagctta
      481 tcagcaaaag ttgaaattac attgcttgat ggatcaaaag tgattgttaa tgttcctgta
      541 aaagttgtag aaaaagaatt gtcagtagtc aaacaacagg caattgaatc aattgaaaat
      601 gcggcacaac aaaagattaa tgaaatcaat aatagtgtga cattaacact ggaacaaaaa
      661 gaagcagcaa ttgccgaagt taataagctt aaacaacaag caattgataa tattaataat
      721 gcgcctgatg ttcattcagt tgaagaaatt caacaacaag aacaagcgca tattgaacaa
      781 tttaatccag aacaatttac gattgaagat gcaattcaac acatgattga tgaaatcaaa
      841 gctcgtactg atctaacaga taaagagaag caagaagcta ttgctaagtt aaatcaatta
      901 aaagaacaag caattcaagc gattcaacat gcgcaaagca tcgatgaaat aactgagcaa
      961 ttggaacaat ttaaagctca aatgaaagca gctaatccaa tagcaaaaga actagctaaa
     1021 cgcaagcaag aagctattgg tagaattaaa gacttttcaa atgaaaaaat gaatagtatt
     1081 cgaaatagtg aaattggctc agctgatgaa aaacaagcag caatgaatcg aattaacgaa
     1141 attgtgcttg aaacaattag agatattaat aatgcgcata cattacagca agttgaggct
     1201 gcattgaaca atggtattgc tcgaatttca gcagtacaaa ttgtaacatc tgatcgtgct
     1261 aaacaatcat caagtactgg aaatgaatct aatagccatt taacaattgg ttatggaact
     1321 gcaaatcatc catttaacag ttcgactatt ggacataaaa agaaacttga tgaagatgat
     1381 gacattgatc cacttcatat gcgtcacttt agtaataatt tcggtaatgt tattaaaaac
     1441 gctattggtg tggtgggtat ctctggctta ctagctagtt tctggttctt cattgcgaaa
     1501 cgtcgtcgta aagaagatga agaggaagaa ttagaaataa gagataataa taaagattca
     1561 ataaaagaga ctttagacga tacaaaacat ttaccacttt tatttgcgaa acgtcgcaga
     1621 aaagaagatg aagaagatgt tactgttgaa gaaaaagatt cgctaaataa tggcgagtca
     1681 ctcgataaag ttaaacatac gccgttcttc ttaccaaaac gccgtcgtaa agaagatgaa
     1741 gaagatgtgg aagttacaaa tgaaaacaca gatgaaaaag tgttgaaaga taacgaacat
     1801 tcaccactct taatcgcaaa acgacgcaaa gataaagagg aagatgttga aacaacaact
     1861 agtattgaat ctaaagatga ggacgttcct ttattattgg ctaaaaagaa aaatcaaaaa
     1921 gataaccaat ccaaagacaa aaagtcagca tcaaaaaata cttctaaaaa ggttgtagct
     1981 aaaaagaaga aaaagaaatc taagaaaaat aaaaaataat ttgtttcttt gataaataga
     2041 ggagcaccga ttgacatcac atcagtcggt gctcctttta tttattcttt ttaattaatt
     2101 tatacaatgc ctgttgagcg tgttgattcg cttctttgtt ttgttctctc ggtatccatt
     2161 taacaaataa taaatcaaaa cttttttcaa atatttctat ttgatcaaaa taaggtttga
     2221 aatttgcgtt tttcacataa ccagcttcaa tgctatccgc aattaactta gagtcagtgt
     2281 acaacagcgc attgctgaca tttaattcac gtgcatgttc tagtgcataa atacatgcag
     2341 cccattctgc agtgtggtta tccatttcgc ctaattcatg tatatatgta taatgctgtt
     2401 catcttcttt gattacaatg gcacatgtac ttatgcctgg atttcctttc gtcgcagcat
     2461 caaaatttat tttcgccata ataaacctac tttctattcg aatacttagt taaagttact
     2521 attactgtaa tacaaaatat gttgggtaat ccattaaaaa acacgcatca cttaaataag
     2581 taacacgtgt ttaaagtact cgctgattca aagatgattt tctaatacgt agtactgtaa
     2641 tatacttcct aaaaaaatca tcttgataaa attttctcag atatcagcct taaaacttat
     2701 tcttttgtgt agtaagtgct ttaatagcct tgatctaact tatcaatttt acctttacga
     2761 taaaatgatt tagcaatata tccaaatggt acattgaaaa ctgttgaagc taattttagt
     2821 acgtacgttg taataaatat ttcaaataca accgtaccag gtaaacttcc gataaatgcg
     2881 atagctacaa ataaagctgt atcaattatt gagcttaaaa atgtactacc atatgcacgg
     2941 atgaaaaacg ttttatcaga actaaatact ttttttatta gtgaaaagat aaatacatca
     3001 atatgttgac caataatata tgcgacgatt gagcctaaag caatgcgtgg cacaacatca
     3061 aagattgcgt gtaatgcttt ttgtgccata tcttctggtg caggaataaa atgtaatgac
     3121 aattgcataa caataatcat aattaatgtt gatgaaaagc ctaaccaaac tgctcttttt
     3181 gcaactctac gaccataaat atcgtttaat atatctgttg ctaaataaat agaagcaaac
     3241 atgacattac ctaaagttgc tgaaatacca aagatttcta cagttttaat cacttgtatg
     3301 ttggcaataa ttgtaccaat tgcaacccat gcaattaaac cttgtttacc aaaaaagcga
     3361 tacataagta ccattagcac gaacgttgca ataaacgtaa ctagtcctaa aatttcatta
     3421 tacatattaa aatgtcctcc taaattttga tcatgcgggt gtttagaaac cgctcaataa
     3481 ataacttact cattttactg aaaaatcgtt tgcgatgcaa tagcatttga atataaatac
     3541 attttacgta tagaattgta aaaggtttca ttcaaatctt agggtcaaaa atgttataat
     3601 atttttatgt caaatttaaa acagtaacac ttatttacaa ggttgcaata ttttgaagta
     3661 ataaaggaag tgtcgcgtat tttaactttt tcagagcaaa atgcactcgc gaaaatagat
     3721 aatttaatga atacttattg caatcaatgt ccaatcaaaa ctcgtctgcg taaattagag
     3781 gggaaaacga aggcgcatca tttttgtatc aatgagtgtt caatagggaa agaaataaaa
     3841 caattaggaa atgaacttca ataggaggaa gtcaaatgca aattatatct atatcagaaa
     3901 caccgaacca caacacaatg aagattacac ttagtgaaag cagagaaggt atgacatcag
     3961 atacgtatac taaagttgat gattcacagc cagcatttat taatgacatc ttaaaggttg
     4021 aaggcgttaa atcaattttc catgttatgg actttatttc agtagataaa gaaaatgacg
     4081 caaattggga aactgtattg ccaaaagtag aggctgtatt cgaataaatt tttcatcaac
     4141 tagtattcgg ggggaataaa gtatatggaa attttacgta tagagccaac gccaagtcca
     4201 aatacaatga aagttgtttt gtcatataca agagaagaca agttatctaa tacttataaa
     4261 aaagtagaag aaaatcaacc agaatttata aatcagttgt tatctataga tggtatcact
     4321 tccatttttc atgtcatgaa cttcttagct gttgataagg caccaaaagc tgattgggaa
     4381 gtcatattac ctgatattaa agctgctttt tctgatgcga ataaggtttt agaatctgta
     4441 aatgaacctc aaattgacaa tcattttggt gaaattaaag ctgaactatt aacttttaag
     4501 ggtataccgt atcaaattaa gctaacttct gctgaccaag aattaagaga acaattacca
     4561 caaacatatg ttgatcatat gacgcaagcg caaacagaac atgacaatat tgtttttatg
     4621 cgtaaatggc tagatttagg aaatcgctat ggaaatattg aagaagtaat ggatggtgtc
     4681 ctagaagaag tgctagctac ttatccagaa tcacagttac ccgtattggt aaaacatgct
     4741 ttagaagaaa atcacgcaac taataattat catttctatc gacatgtctc tttggatgaa
     4801 tatcatgcga ctgataattg gaagactcga ttacgaaagt taaaccattt tccaaagccg
     4861 acttttgaag atataccgct gcttgattta gctttatctg atgaaaaagt accggttaga
     4921 cgtcaagcga ttgtattatt aagtatgatt gaaagtaaag aaattttacc gtatttatat
     4981 aaggggcttc gtgataaaag tcctgctgta agaagaacag caggggattg cataagcgat
     5041 ttagggtatc cagaggcact accagaaatg gtgctactat tagatgatcc acagaaaatc
     5101 gttaggtggc gtgctgctat gtttatcttt gatgaaggta atgcagagca gcttcccgca
     5161 cttaaagctc atattaatga caatgcgttt gaagttaaat tacaaattga aatggccata
     5221 tctcgtattg aaaacggaga tgaagcactt ggttcagtat ggaaacaaat ggcaaacaga
     5281 acaatttaat tggaggaatt aaatatgaat gcatatgatg cttatatgaa agaaattgcg
     5341 caacaaatgc gtggcgaatt aactcaaaat ggttttacaa gtttagaaac aagcgaagca
     5401 gtatcagagt atatgaacca agtaaaggca gatgacacta cttttgtagt tattaactct
     5461 acatgcggct gtgcagctgg attagcaaga ccagctgcag tagcagttgc aacacaaaat
     5521 gaacatagac ctacaaatac agttacagtt tttgctgggc aagataaaga agcaactgct
     5581 acaatgcgag aattcattca gcaagcacca tctagtcctt cgtatgcttt attcaaaggt
     5641 caagatttag tttattttat gcctagagaa tttatcgaag gtagagatat taatgacatt
     5701 gcaatggact taaaggatgc ctttgacgaa aattgtaaat agtacacata aataaatata
     5761 aaggttaaca cattttataa tattaaaaat ggtgtctgtc attgaaaata gagaatatag
     5821 ttgtattcca tttgttatat aaagtacgtt cttaccaact atattttcta taaatttaac
     5881 tgttttaata ggacatcaaa cataatattc aaatcatgtg ttaacctctt ttttaaaatt
     5941 ttttagcatt aaagttttag atttgggtaa acaattagca attggaaaca tagatcacgt
     6001 tatgatgtgg caggtactta atcagcattt tataaataaa gtaacggaat ccatgatatt
     6061 aatatcacat tcctaaaatg attgatcaca aaatgctaca taaagttaaa ttatatcgaa
     6121 ctaaatttac atactataaa taatgaaaat gaggtgttat cgcatatgtt gaattcattt
     6181 gatgcagcat atcacagtct ttgtgaagaa gttttagaaa taggaaatac acgaaatgat
     6241 cgcacaaata caggtacgat ttcgaaattt ggtcatcaac ttcgctttga cttatctaaa
     6301 ggatttccac tattaacgac aaagaaagtt tcttttaaat tagtagcaac cgaattatta
     6361 tggttcatta aaggagatac c
//
LOCUS       DALMNS010000125         6047 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.125, whole genome shotgun sequence.
ACCESSION   DALMNS010000125 DALMNS010000000
VERSION     DALMNS010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 6047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6047
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.125"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            58..1350
                     /gene="obgE"
                     /locus_tag="O6Y56_002387"
     CDS             58..1350
                     /gene="obgE"
                     /locus_tag="O6Y56_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020444729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HDB5575623.1"
                     /translation="MFVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGKGASV
                     VFEVDEGLRTLLDFRYQRHFKASKGENGQSSNMHGKNAEDLVLKVPPGTIIKNVETDE
                     VLADLVEDGQRAVVAKGGRGGRGNSRFATPRNPAPDFSEKGEPGEELDVSLELKLLAD
                     VGLVGFPSVGKSTLLSIVSKAKPKIGVYHFTTIKPNLGVVSTPDQRSFVMADLPGLIE
                     GASDGVGLGHQFLRHVERTKVIVHMIDMSGSEGREPIEDYKVINQELAAYEQRLEDRP
                     QIVVANKMDLPESQDNLILFKEEIGEDVPVIPVSTITRDNIDQLLYAIADKLEEYKDV
                     DFTVEEEESVGINRVLYKHTPSQDKFTISRDDDGAYVVSGNAIERMFKMTDFNSDPAV
                     RRFARQMRSMGIDDALRERGCKNGDIVRILGGEFEFVE"
     gene            1363..1818
                     /locus_tag="O6Y56_002388"
     CDS             1363..1818
                     /locus_tag="O6Y56_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HDB5575624.1"
                     /translation="MDNKDYKKFYLIREDVLPESVVKTLKIKDALKSDPTLSIYDAVK
                     QFDLSRSAFYKYRETIFPVDDKMLDHREFTLILYVTDIVGMLARVLDVISKLELSVLT
                     IHQSIPMEEKATITLSLNAKSKETSVEDVIGALRNLDYVSKVELISMSM"
     gene            1832..2434
                     /gene="ruvA"
                     /locus_tag="O6Y56_002389"
     CDS             1832..2434
                     /gene="ruvA"
                     /locus_tag="O6Y56_002389"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDB5575625.1"
                     /translation="MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEV
                     LIHTSLIVREDAQLLYGFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRAIE
                     NENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAML
                     ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS"
     gene            2466..3470
                     /gene="ruvB"
                     /locus_tag="O6Y56_002390"
     CDS             2466..3470
                     /gene="ruvB"
                     /locus_tag="O6Y56_002390"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDB5575626.1"
                     /translation="MNERMVDQSMHSEETDFELSLRPTRLRQYIGQNSIKSNLEVFIK
                     AAKLRHEPLDHVLLFGPPGLGKTTLSNIIANEMEVNIRTVSGPSLERPGDLAAILSGL
                     QPGDVLFIDEIHRLSSVVEEVLYPAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATT
                     RAGSLTGPLRDRFGVHLRLEYYNESDLKEIIIRTAEVLGTGIDEESAIELAKRSRGTP
                     RVANRLLKRVRDFQQVNEDEQIYIETTKHALGLLQVDQHGLDYIDHKMMNCIIKQYNG
                     GPVGLDTIAVTIGEERITIEDVYEPFLIQKGFLERTPRGRKATPLAYEHFAKSNEERE
                     "
     gene            3472..4497
                     /gene="queA"
                     /locus_tag="O6Y56_002391"
     CDS             3472..4497
                     /gene="queA"
                     /locus_tag="O6Y56_002391"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDB5575627.1"
                     /translation="MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGEMKHLHFK
                     DIIEYFKPGDTLVLNDTRVMPARLFGLKEETGAKVEMLMLTQIEGNDWEVLLKPAKRI
                     KVGNKLNFGNGKIIAECIKEMDQGGRIMRLHYEGILQERLDELGEMPLPPYIKERLDD
                     PDRYQTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDD
                     VNDHEMHSEYYQMTQETADLLNDTKSKGYRIISVGTTSTRTLETIRRDHDKFVETSGW
                     TNIFIYPGFDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSF
                     GDAMLII"
     gene            4520..5659
                     /gene="tgt"
                     /locus_tag="O6Y56_002392"
     CDS             4520..5659
                     /gene="tgt"
                     /locus_tag="O6Y56_002392"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDB5575628.1"
                     /translation="MPAVTYEHIKTCKQSGARLGIVHTPHGSFETPMFMPVGTKATVK
                     TMSPEELRQIEAKIILGNTYHLWLQPGNDIIKHAGGLHKFMNWDGPILTDSGGFQVFS
                     LSNLRKITEEGVEFRHHTNGSKLFLSPEKSMQIQNDLGSDIMMAFDECPPMPAEYDYV
                     KKSIERTTRWAKRCLDAHQRPEDQALFGIIQGGEYEDLREQSAKDLVELDFPGYAIGG
                     LSVGEPKPVMYKMVEHTEQFMPKDKPRYLMGVGSPDALIECSIRGMDMFDCVLPTRIA
                     RNGTCMTSQGRLVIKNAKFADDLRPLDENCDCYTCQNYSRAYIRHLIKAEETFGIRLT
                     TIHNLHFLLKLMEDIRQAIREDRLLDFKEEFFEQYGLNVENPKNF"
     gene            5678..5938
                     /gene="yajC"
                     /locus_tag="O6Y56_002393"
     CDS             5678..5938
                     /gene="yajC"
                     /locus_tag="O6Y56_002393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDB5575629.1"
                     /translation="MQFSLLIYIVVIFAVMYFLMIRPQQKRAKQHRELINNIQSGQRI
                     TTIGGIKGTVKAVDETTVVITVNGHGTELTFEKPAIKQVDPS"
BASE COUNT         2120 a          833 c         1257 g         1837 t
ORIGIN      
        1 tctaatatgc tataattatt gggaaaatga aaattatatg taaaagaggt gagatatatg
       61 tttgtcgatc aagtcaaaat atctcttaaa gccggtgatg gtggtaatgg tattaccgca
      121 tacagaagag aaaaatatgt accatttggt ggaccagctg gcggtgacgg tggtaaaggt
      181 gcttcagtcg tatttgaagt ggatgaaggt ttaagaacgt tattagattt taggtatcaa
      241 cgtcatttta aagcaagcaa aggtgaaaat ggccaaagta gtaatatgca tggtaaaaat
      301 gcggaagatt tagtattaaa agttccacct ggtacaatta ttaaaaatgt tgaaacagac
      361 gaagtgttag ctgatcttgt tgaagatggt caaagagctg tagtagcgaa gggcggtcga
      421 ggtggccgag gtaattcacg ttttgcaaca cctagaaacc ctgcacctga cttcagtgaa
      481 aaaggtgaac caggtgagga attagatgta tctttagaat tgaaattatt agctgatgta
      541 ggattagtag gcttccctag tgtgggtaaa tcgactttat tatctatcgt ttcaaaagct
      601 aagcctaaaa ttggggtata tcattttaca acgattaaac caaatctagg tgttgtttca
      661 acacctgatc aacgaagttt tgttatggca gatttaccag gtttaattga aggtgcatct
      721 gatggcgttg gattaggaca tcaattttta agacatgtag agagaacaaa agttattgtt
      781 cacatgattg atatgagtgg ttctgaaggt agagaaccta ttgaagatta taaagtcatt
      841 aatcaagaat tagccgcgta cgagcaacgt ttagaagata gacctcaaat cgtagtagct
      901 aacaagatgg atttacctga atcacaagat aatttaatct tatttaaaga agaaattggc
      961 gaagatgtgc cagttattcc agtttcaaca ataacgcgtg ataatattga tcaattatta
     1021 tatgcaatag cagataaatt agaagaatat aaagatgttg acttcacagt tgaagaagag
     1081 gagtcggttg gcattaaccg agtattatat aaacatacac cgtcacaaga taaatttaca
     1141 atttcaagag atgatgatgg tgcttatgtg gtaagtggta atgctattga aagaatgttt
     1201 aaaatgactg actttaacag tgatccagca gtacgtcgat ttgctcgtca aatgcgttcg
     1261 atgggtattg atgatgcgct tagggaacgt ggttgtaaaa atggtgatat cgttagaatt
     1321 cttggcggag aatttgaatt cgttgaatag gagcgtaaca tgatggacaa taaagattat
     1381 aaaaagtttt atttaattag agaagatgtc ttgcctgaat ccgtggttaa aacattgaag
     1441 attaaagatg ccttaaaaag tgatccaaca ttgtccattt atgatgccgt taaacagttt
     1501 gatctatcta gaagtgcttt ttataaatat agagaaacga tatttccagt agacgataaa
     1561 atgcttgacc atcgagaatt tacattaatt ttatatgtaa ctgatattgt gggtatgttg
     1621 gcacgtgtac tagatgttat atcaaagtta gaactatctg tattaacgat tcatcaaagt
     1681 attccaatgg aagaaaaagc aacaataaca ttatcactga atgctaaatc taaagaaact
     1741 tcagtagaag atgttattgg cgctttgaga aatttagatt atgtatcaaa agtagaatta
     1801 attagtatga gtatgtaagg atgtgcctat aatgtacgcg tatgtcaaag gtaagttaac
     1861 acatttatat cctacacacg tagttgttga aactgctggt gttggttatg aaattcaaac
     1921 accaaattct tatcgttttc aaaagcatct agatcatgaa gttttaattc atacatcttt
     1981 aattgttcgt gaagatgcac aattattgta tggatttagt agtgaagaag agaaagatat
     2041 gttcttgagt ttaattaaag ttactggtat tggtccgaaa tcagctttag ctattttagc
     2101 gacaagtacg cctaatgaag taaaacgtgc cattgaaaat gaaaatgata cgtatttaac
     2161 taaattccca ggaattggta agaaaacggc aagacagatt gtcttagatt taaaaggtaa
     2221 agtgaaaatc actgaagaag atagcgattc attattacaa gtagacgcta catcgacggt
     2281 gcaagatcaa ttcgtgcaag aagcaatgtt agcgttagaa gcattaggtt attctaaacg
     2341 agagcttgca aaagttgaga aaacgttaaa taaaaataaa tatgactcag ttgatgaagc
     2401 tgttaaggca ggtcttcaat tagttgtatc ttaattttaa atagattaat aggggaagtg
     2461 ttgtcatgaa tgagcgtatg gttgatcaat caatgcatag tgaagaaact gatttcgaat
     2521 tgtcgcttag acctacgaga ttacgacaat atattggtca aaattcaata aaaagtaatt
     2581 tagaagtatt tattaaagcg gctaaacttc gtcatgaacc attagatcat gtattgcttt
     2641 ttggcccccc tggattaggt aagacaacat tatctaatat cattgccaat gaaatggaag
     2701 ttaatatacg tacagtatca gggccttcat tagaaagacc tggtgatttg gctgcaattt
     2761 tatcagggct tcaacctgga gatgttttgt ttattgatga aatacacaga ctgagtagtg
     2821 ttgttgaaga agtgttatac cctgcaatgg aagatttctt tttagatatt atcattggta
     2881 aaggcgatga ggctagaagt atccgaatcg acttacctcc attcactttg gtaggtgcaa
     2941 caacgcgagc tggtagctta acaggtccac taagggatcg atttggtgtg cacttaagat
     3001 tagaatatta taatgaatca gatttaaaag aaatcattat tagaacagct gaggttttag
     3061 gcacaggtat tgatgaagaa agtgctattg aacttgctaa acgttctaga gggactccaa
     3121 gagtagcaaa tcgactattg aaacgggtaa gagacttcca gcaagtgaat gaagatgaac
     3181 aaatatacat tgaaacaaca aagcatgcat taggtttact tcaagttgat caacacggac
     3241 tagattacat tgatcataaa atgatgaact gtattattaa gcagtataat ggtggacctg
     3301 ttggtttaga tacgattgcc gtaacaattg gcgaagaacg tattacaatt gaggacgttt
     3361 atgagccatt tcttattcag aaaggctttt tagaacgtac gccacgtggc agaaaagcaa
     3421 caccattagc ttatgaacat tttgcaaagt cgaatgagga gagagaataa cgtgaatatt
     3481 gaagaatttg actatgactt accagaatca ttaattgctc aaacgccttt aaaagatcgt
     3541 gatcatagtc gtttattagt catggataga gaaactggtg aaatgaaaca tttacatttc
     3601 aaagatatca ttgagtattt taaacctggt gatacattag tgcttaacga tacgcgagta
     3661 atgccagcta gactttttgg tttaaaagaa gaaactggtg caaaagttga aatgttaatg
     3721 ttaactcaaa ttgaaggtaa tgattgggaa gtcttactga aaccagctaa gcgtattaaa
     3781 gttggtaata aattgaattt tggtaatggc aaaattatag ctgaatgcat aaaagaaatg
     3841 gatcaaggtg gacgcatcat gcgtttacat tatgaaggta ttttacaaga aagattagat
     3901 gaattagggg aaatgccact gccaccatac atcaaagaac gtttagatga tccagatcgt
     3961 tatcaaacag tttacgctaa agaaagtggt tcagcggcag caccaacagc aggattacat
     4021 tttactgatg agttattaac tgaaattaaa aataaaggtg ttaatatcgc atttgttaca
     4081 ttacatgttg gattaggtac gtttagaccg gtgagcgtcg acgatgtgaa tgaccacgaa
     4141 atgcatagtg aatattatca aatgacacaa gaaacagctg atttattaaa tgatactaag
     4201 tccaaaggat atcgcattat atcagttggt acaacttcaa cacgtacact tgaaacaatt
     4261 cgacgcgatc atgataaatt tgttgaaacg agtggctgga ctaatatatt tatttatcca
     4321 ggatttgatt ttaaagcaat tgatggccag attactaatt ttcatttacc aaaatcaaca
     4381 ttagttatgc tagtatcagc gtttagtact cgtgaaaatg ttctgaatgc ttataaaacg
     4441 gcagtaaatt tagaatatag attctttagt tttggcgatg caatgttaat tatataaaaa
     4501 gaatgtgagg attttgaata tgcctgcagt aacatacgaa cacattaaga cttgtaaaca
     4561 atcaggtgcg cgtttaggta tcgtgcacac accacacggt tcatttgaaa cacctatgtt
     4621 tatgccagtt ggtactaaag caaccgttaa aacaatgagt ccagaagagt taagacaaat
     4681 tgaagcaaaa atcattttgg gcaacacata tcatttgtgg ttacaacccg gaaatgatat
     4741 tatcaaacac gctgggggat tacataaatt catgaattgg gatggtccga ttctaacaga
     4801 ttcaggcggt ttccaagtgt ttagtttaag taatttacgt aaaattacag aagaaggcgt
     4861 ggaatttaga catcatacta atgggtctaa attatttttg agtcctgaga aatcaatgca
     4921 aattcaaaat gatttaggtt ctgatattat gatggcattt gatgaatgtc caccgatgcc
     4981 tgctgaatat gattatgtaa aaaaatctat tgaacgtaca acacgttggg cgaaaagatg
     5041 tctagatgca caccaaagac ctgaagatca agcattgttc ggcattatac aaggtggcga
     5101 atatgaagat ttaagagaac aaagtgcaaa ggatttagta gaattagatt ttcctggtta
     5161 tgcaatcggc ggtttgtcag ttggtgaacc taaaccggtt atgtataaaa tggttgaaca
     5221 tacagagcag tttatgccta aagataaacc aagatattta atgggtgtag gatctccaga
     5281 tgcgttaatc gaatgtagta ttcgcggcat ggatatgttt gattgtgtct taccgacacg
     5341 tattgccaga aatggtactt gtatgacatc gcaaggtcgt ttggttatta aaaatgcaaa
     5401 atttgcagat gatttaagac cgttagatga gaattgtgac tgttatacat gtcaaaacta
     5461 ctcaagagcg tatatacgtc atttaatcaa ggcagaggaa acttttggta ttcgtcttac
     5521 tactattcat aatttacatt ttctgctaaa attaatggaa gatataagac aagccattcg
     5581 agaagatcgt cttttagatt tcaaagaaga attcttcgag caatatggat taaatgttga
     5641 gaacccaaaa aacttttaag caagaggagc gtataaaatg caattttcat tactaatata
     5701 tatagtcgta atttttgcgg ttatgtattt cttgatgatc agaccacaac aaaaacgtgc
     5761 gaaacagcat cgtgagttga ttaataacat tcaatctggt caaagaatta caactattgg
     5821 tggtattaaa ggtactgtta aagcagtaga tgaaacaact gttgttatta cagttaatgg
     5881 tcatggtact gaattaactt tcgaaaaacc tgctattaaa caagttgacc cttcataaca
     5941 agaagtggta ttaaaaagga tgaaacgaat agcgtttcat cctttttaag ttataagtag
     6001 tatgtagaat agcttatttt tattccaaaa aaagaaattg tgataca
//
LOCUS       DALMNS010000126         5974 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.126, whole genome shotgun sequence.
ACCESSION   DALMNS010000126 DALMNS010000000
VERSION     DALMNS010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5974
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.126"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            19..654
                     /locus_tag="O6Y56_002394"
     CDS             19..654
                     /locus_tag="O6Y56_002394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HDB5575630.1"
                     /translation="MLGTDELYKLLYRHMGPQNWWPADNDIEMMLGAILVQNTRWRNA
                     EIALNQIKEHTHFNANHILELPIETLQSLIHSSGFYKSKSLTIKTLLTWLARHHFNYQ
                     EINERYKAELRKELLSLKGIGSETADVLLVYIFGRIEFIPDSYTRKIYDKLGYENTKS
                     YDQLKKVVTLPNHFTNQDANEFHALLDVFGKHYFRDKDIKNYDFLEPYFKK"
     gene            964..1851
                     /locus_tag="O6Y56_002395"
     CDS             964..1851
                     /locus_tag="O6Y56_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015581799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDB5575631.1"
                     /translation="MKKSLIAFILIFMLVLSGCGMKDNDKQGSDDNGSSKSPYHRIVS
                     LMPSNTEILYELGLGKYIVGVSTVDDYPKDVKKGKKQFDALNLNKEELLKAKPDLILA
                     HESQKATANKVLSSLEKQGIKVVYVKDAQSIDETYNTFKQIGKLTHHDKQAEQLVEET
                     KDNIDKVIDSIPAHHKKSKVFIEVSSKPEIYTAGKHTFFNDMLEKLEAQNVYSDINGW
                     NPVTKESIIKKNPDILISTEAKTRSDYMDIIKKRGGFNKINAVKNTRIEVVNGDEVSR
                     PGPRIDEGLKELRDAIYRK"
     gene            2002..2952
                     /locus_tag="O6Y56_002396"
     CDS             2002..2952
                     /locus_tag="O6Y56_002396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDB5575632.1"
                     /translation="MTFNKVLLSWIVILIITTSIYLFWQLGDINDVFNQSILINVRLP
                     RLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLALFLGLSTLWIPV
                     FSITFSLITLITVLVITSVLSQGYPVRILILSGLMIGALFNSLLYFLILLKPCKLNTI
                     ANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLIT
                     YIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQWKQSLGRQLALNIVIGGQIMVV
                     ADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQSKRLH"
     gene            3007..3726
                     /locus_tag="O6Y56_002397"
     CDS             3007..3726
                     /locus_tag="O6Y56_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDB5575633.1"
                     /translation="MDLNQIKAVVFDLEGTLLDRVKSREKFIEEQYERFHDYLIHVQL
                     ADFKKAFIELDDDEDNDKPDLYKEIIKRFHVDRLTWKDLFNDFEMHFYRYVFPYYDTL
                     YTLEKLSQKGFQIGVIANGKSKIKQFRLHSLGLMHVINYLSTSETVGFRKPHPKIFED
                     MIDQLGVLPEQIMYVGDDALNDVAPARAMGMVSVWYKQEDAEIEPLEEEVDFTITTVE
                     ELLTILPIKNDNKGENYGSIY"
     gene            3710..4510
                     /locus_tag="O6Y56_002398"
     CDS             3710..4510
                     /locus_tag="O6Y56_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDB5575634.1"
                     /translation="MDLFTRKDGTSIHYSTLGEGYPIVLIHTVLDNYSVFNKLAAELA
                     KSFQVVLIDLRGHGYSDKPRHIEIKDFSDDIVELLKYLYIEEVAFVCHEMGGIIGADI
                     SVRYPEFTSSLMLVNPTSIEGELPEERLFRKYAHIIRNWDPEKQDKFLNKRKYYRPRK
                     MNRFLKHVVDTNEISTKEEIQAVKEVFKNADISQTYRNVVVPTKIIAGEFGERTTRLE
                     AKEVADLIQNVDFEVYQESSAFPFVEEQERFVEDTAAFINKHHDEKHV"
     gene            4646..5152
                     /locus_tag="O6Y56_002399"
     CDS             4646..5152
                     /locus_tag="O6Y56_002399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575635.1"
                     /translation="MKKLLTASIIACSVVMGVGLANTSAEAASGNSIDTVKQLIKGDQ
                     SLENVKIGESIKDVLTKYKNPMYSYNEDGTEHYYEFHTKKGMLLVTTDGKKNNGKVTH
                     ISMMYNDANGPTYQAVKNYVGKAVTHTEYSKVAGNFGYIEKGKTTYQFASAPKDKNIK
                     LYRIDLEK"
     gene            5314..>5974
                     /locus_tag="O6Y56_002400"
     CDS             5314..>5974
                     /locus_tag="O6Y56_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575636.1"
                     /translation="MRINDKILLENIEDYFNHKGLSPHLIDDIKEKVITDIKNSEKKD
                     QDYIEYKRKSPAQIILMIQRNLFALQMNPVIFFIINFILISYLYDKQYVQFQAITGMS
                     LFYCLVIFPMTIVVYLRVSQKNYLRSNKIEMIMGTIIAIISLLLIILQAFNITWGVIP
                     ITNFGHQFFFFIGIILVIAGIFYKRLEFSGIGLLFCQKTVDAMIHNPQSAQIFSLIIW
                     IL"
BASE COUNT         2215 a          756 c         1065 g         1938 t
ORIGIN      
        1 tctaaaagga ggatgtaaat gttaggaact gatgaattgt ataaattgtt atataggcat
       61 atgggacctc aaaattggtg gcctgctgat aatgacattg aaatgatgtt aggtgcaatt
      121 ttggttcaaa atactagatg gcgaaatgca gaaattgcat tgaatcaaat taaagagcac
      181 acgcatttta atgcaaatca tatattagaa ctacctattg aaacgttaca atcattgatt
      241 cattcaagtg gcttttataa aagtaaatca ctgacgatta aaacattatt aacatggtta
      301 gcacgacatc atttcaatta tcaagagatt aatgagcgat ataaagctga attaagaaaa
      361 gaattattat ctttgaaagg tattggaagt gaaacagcag atgtcttact tgtttatata
      421 ttcggacgta ttgaatttat tccagatagc tatacaagaa aaatatatga taaattagga
      481 tatgaaaaca ctaaaagtta tgatcaatta aaaaaagtag tcacattacc aaatcatttt
      541 acaaatcaag atgctaatga atttcatgct ctgttagatg tatttggtaa acattacttt
      601 agagataaag atataaagaa ttatgatttt ttagaacctt actttaaaaa gtaaacgctg
      661 tgaagttaga tagatgagtt tatatgaaat ataaaaaata atttactatt ttcttttagt
      721 atgtggactt atataataaa tagaagcata taaagaaaaa aagttgtttg tttgtgcagt
      781 aactgcataa atccctctaa tcgctaaaga tgaagaggaa cgcagttgga tgctaaggca
      841 caactgcata aaagcctcta atcactaaag cgaaggggaa cgcagttgaa tgctaccgca
      901 caactgcata aatccctcta atcgctaaag cgaaaagtgg gattaaaaag gagatgtgat
      961 aatgtgaaga aatcgttaat tgcttttatt ttgattttta tgcttgttct gagtggctgt
     1021 ggtatgaaag ataatgataa acaaggtagc gatgataatg gctcgtctaa atcgccgtac
     1081 catagaattg tttcgttaat gcctagtaat actgaaattt tatatgaatt aggattaggt
     1141 aaatacatag ttggtgtttc aacggttgat gattatccaa aagatgtgaa aaagggtaag
     1201 aaacaatttg atgctttgaa tctaaataaa gaggaacttt taaaggcaaa gccagatcta
     1261 attcttgcgc atgagtcgca aaaggcaact gcaaataaag tattgtcatc attagagaaa
     1321 caaggcatca aagtagtgta tgttaaagat gcacaatcaa ttgatgaaac ttacaacaca
     1381 tttaagcaaa ttgggaaatt aacgcatcat gataagcagg ctgaacaact tgttgaggaa
     1441 actaaagata atatcgataa agtcatagat tcaattcctg ctcatcataa aaaatcaaaa
     1501 gtatttattg aggtttcatc aaagcctgaa atatatacag cagggaagca tacatttttc
     1561 aatgatatgt tagaaaaatt agaagcccaa aatgtttata gtgacattaa tggttggaac
     1621 cctgtaacga aggaaagtat tattaaaaag aacccagata tattaatttc gacggaagct
     1681 aagacaagat cagattatat ggatatcatc aaaaaaagag gtggattcaa taaaattaat
     1741 gctgtcaaga atacacgtat tgaagttgta aatggtgatg aagtgtcaag accaggtcca
     1801 cgtattgatg aaggattaaa agaattaaga gatgcaattt atagaaaata aaccattcta
     1861 attatgcccc ttattgctac atgtagtaaa aattacatgt ttgagataag gggtttttaa
     1921 aatatattta gtgaatgata gcaacgcgag tatgtgattg ctataataaa tgtaattatc
     1981 gatgaaagaa aagagaatgc tatgacattt aataaagtat tattgagctg gatagtcata
     2041 ttgattataa caactagcat atatctattt tggcagttgg gggatatcaa tgatgtattt
     2101 aaccagtcta ttttaatcaa tgttagatta ccgagattat tagaagcatt gttgacaggt
     2161 atgatattaa ctgttgcagg tcttatattt caaacagttt taaataatgc attggcagat
     2221 agctttacgt taggattggc aagcggtgct acatttggtt caggattagc attattttta
     2281 ggattatcaa cgttatggat tcctgtattt tcaataacat ttagtttgat aacattaata
     2341 actgtattag tcattacgtc ggtattgagc caaggatatc cagttagaat cttaatatta
     2401 agtggtttaa tgattggtgc attattcaat tcacttctat attttttgat tttattaaaa
     2461 ccttgcaaat taaatacaat tgccaattat ctgtttggtg gttttggtga tgcagaatac
     2521 tcaaatgtat ccataatagc aatcacattt atcattgcac tgtttggtat atttatcatt
     2581 cttaatcaac taaagttatt gcaattagga gaactaaaaa gtcagtcgct aggcttaaat
     2641 gttcaattga ttacatatat cgcgttatgt atagcttcta tgataacggc gataaatgtc
     2701 gcatatgttg gcatcattgg attcattggt atggtgatac cacaactcat tagaaaatgg
     2761 cagtggaaac aatcattagg tagacaattg gctttgaata ttgtaattgg aggacaaata
     2821 atggttgtgg cagattttat tggtagtcat atattgtcac cagtacaaat accggcaagt
     2881 attatcattg cattaattgg tataccagtg ttattttaca tgctaatatc gcagtcgaaa
     2941 cggttacact agcacatgac ttttgctaaa ataaaaataa ctataaacat aaagagggca
     3001 taagcgatgg atttgaatca aattaaagca gttgtatttg atttagaagg tacgttgttg
     3061 gacagagtta aatctcgaga gaaatttatc gaagagcaat atgaacgatt tcatgactac
     3121 ttaattcatg ttcaactagc agattttaaa aaagcattta ttgagctaga tgacgatgaa
     3181 gataatgata aacctgattt atataaagaa atcattaaac gtttccatgt agataggcta
     3241 acttggaaag acttatttaa tgattttgaa atgcattttt atcgttatgt atttccttat
     3301 tacgatactt tatatacact agaaaagcta tcgcaaaaag gctttcaaat tggtgtaatc
     3361 gcaaatggta aatctaagat taaacaattt cgattacact cacttggttt gatgcatgtt
     3421 attaattatt tatcaacatc agaaacagtt ggttttcgta aaccacatcc taaaattttt
     3481 gaagatatga ttgatcaact aggggtatta cctgagcaaa ttatgtatgt aggcgatgat
     3541 gcgttaaatg atgtagctcc agcacgagct atgggcatgg ttagtgtatg gtataaacaa
     3601 gaagatgctg aaattgaacc actcgaagaa gaagttgatt ttacaattac aacagtggaa
     3661 gaattattaa ccattttacc aataaaaaat gataataaag gagaaaatta tggatctatt
     3721 tactagaaaa gatggaacat cgatacatta cagtacatta ggtgaaggct atcctatcgt
     3781 attgattcat actgtacttg ataattattc tgtgtttaat aaattagcag cagaattagc
     3841 aaaatcattt caagttgtgt taattgattt acgtggacat ggctattctg ataaacctcg
     3901 tcacattgaa ataaaagatt tttctgatga cattgttgaa ttacttaaat atctatacat
     3961 tgaagaagtt gcatttgtat gccatgaaat gggtggaatc attggtgcgg atatttcagt
     4021 acgttatcct gaatttacat catcacttat gttggtaaat ccaacatcta ttgaaggtga
     4081 attaccggaa gaacgtttat ttagaaaata tgcccatatt attcgaaact gggatcctga
     4141 aaaacaagat aaatttttaa ataagcgtaa gtattatcgt ccgagaaaaa tgaaccgatt
     4201 cctcaaacat gtcgtagata caaatgaaat ttcaactaaa gaagaaattc aagcagttaa
     4261 agaggtattc aaaaacgctg atatttctca aacttataga aatgtcgtag taccgacaaa
     4321 aattattgca ggagaattcg gtgaaagaac aacaagatta gaagctaaag aagtagctga
     4381 tttaatccaa aatgtggact ttgaagtata tcaagaatct agtgcattcc catttgttga
     4441 agagcaagaa agattcgtcg aagatacagc tgcatttatc aacaaacatc acgatgaaaa
     4501 gcatgtttaa tttttagtga taagtgaaat ataaaagtag taattattat ttgtaatata
     4561 attgtaatat gactgttgtt ttagaaatga ttgttgtata atggttgtga gcacaagacg
     4621 atataaataa aaggagagag tgcttatgaa aaagctacta acggcaagta taattgcatg
     4681 ttctgttgta atgggagtag gcttagcgaa cactagtgcc gaagcagcaa gtggcaactc
     4741 tattgatact gttaaacaat taattaaggg tgatcagtca ttagaaaatg tgaaaattgg
     4801 cgaatctatt aaagatgttt taactaagta caaaaatccg atgtattctt acaatgaaga
     4861 tggaactgaa cattattacg aattccatac taaaaaaggt atgttattag taactactga
     4921 tggtaagaaa aacaatggta aagtaactca tatttcaatg atgtataatg atgctaatgg
     4981 tccaacatat caagctgtta aaaattatgt tggcaaagca gtaacacata cggaatatag
     5041 caaagttgct ggtaattttg gatatattga aaaaggcaaa acgacttatc aatttgcctc
     5101 agcaccaaaa gataaaaaca taaaattata tcgtattgat ttggaaaaat aataattaaa
     5161 ttaatcgtgc ttaaccgaca agttaaatcg caatacttgt cggttatttt attacatggc
     5221 ataatacagt gaatattaat ttttatgatt tgcgaagggg atattaaacc aatacaataa
     5281 ataaagatgt ttcattttaa aggagtacta ccaatgcgta ttaacgataa aattttacta
     5341 gaaaatatag aagattactt taatcataaa ggtttatcac cgcatttgat tgatgatatt
     5401 aaagagaaag taattactga tataaaaaat tctgaaaaga aagatcaaga ttatattgaa
     5461 tataaaagaa aatctccagc acaaatcata ttaatgattc aaaggaattt gtttgcttta
     5521 caaatgaatc cagttatttt ctttattata aacttcattc tcatatccta tttatatgat
     5581 aaacagtatg ttcagtttca agctattact ggaatgagtc tattttattg tttagtgatt
     5641 tttccaatga ctattgttgt atacctaagg gtgtctcaaa agaattactt gcggagtaat
     5701 aaaatagaaa tgattatggg tacaattatc gctatcatat ccttgttatt aattatatta
     5761 caagcattta atattacttg gggcgttata ccaattacaa attttggaca tcaatttttc
     5821 tttttcattg gtattatttt agttattgcc ggcatatttt ataagcgact tgagttttca
     5881 ggaatcggct tattgttttg tcaaaaaacc gtcgatgcaa tgattcataa tccacaatca
     5941 gcccagattt tttcattaat tatatggata ttat
//
LOCUS       DALMNS010000127         5799 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.127, whole genome shotgun sequence.
ACCESSION   DALMNS010000127 DALMNS010000000
VERSION     DALMNS010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5799)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5799)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5799
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.127"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..692)
                     /locus_tag="O6Y56_002401"
     CDS             complement(<1..692)
                     /locus_tag="O6Y56_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HDB5575637.1"
                     /translation="MTLSKETEVIFDWRRGVEYHSANPPLYDSSTFHQTSLGGDVKYD
                     YARSGNPNRELLEEKLARLEQGKFAFAFASGIAAISAVLLTFKSGDHVILPDDVYGGT
                     FRLTEQILNRFNIEFTTVDTTKLEQIEGAIQSNTKLIYIETPSNPCFKITDIKAVSKI
                     AEKHELLVAVDNTFMTPLGQSPLLLGADIVIHSATKFLSGHSDLIAGAVITNNEAISE
                     ALYLIQNGTGNM"
     gene            complement(689..1792)
                     /locus_tag="O6Y56_002402"
     CDS             complement(689..1792)
                     /locus_tag="O6Y56_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDB5575638.1"
                     /translation="MKDTQLAQITLTDDSTGAIANPIHLSTAYKHPKLGQSTGFDYTR
                     TKNPTRSTFETCFAKLEHGIASFATSSGMSAIQLICNLFKPHDEILVSFDLYGGTFRL
                     FEFYEQQYDIKFKYVDFTDYEQVEKEITDKTVALFIEPISNPQMIAIDVKPYYQLCKA
                     KGLLSIIDNTFLTPYLSTPLAEGADIVLHSATKYIGGHNDVLAGVVTVKDESLAQQLF
                     DFHNMTGATLSPIDSYLLLRGLKTLHLRIERAQSNARKLAKKCQSLQAIDEVLYSGQT
                     GMLSLRLNKAYSVAKLLENLDICIFAESLGGTETLVTFPYTQTHVDMPDAEKDKRGID
                     EYLIRLSLGVENYEDIERDIIQALDKAQIGEIV"
     misc_binding    complement(1858..2227)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            2456..3301
                     /locus_tag="O6Y56_002403"
     CDS             2456..3301
                     /locus_tag="O6Y56_002403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HDB5575639.1"
                     /translation="MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHL
                     NDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRASEIAGLKYVSAIIKDLTDEDMM
                     ELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
                     KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSK
                     SETDKVDITKPKFIKQQERQLREQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLN
                     RKYGK"
     gene            3455..4336
                     /locus_tag="O6Y56_002404"
     CDS             3455..4336
                     /locus_tag="O6Y56_002404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HDB5575640.1"
                     /translation="MDQVMSIISSLFEPLTKIETYESVATKLAMIIIYIIVALIVIKI
                     LDKMIAQGFKIQNKSKKGNKKRSKTLISLVQNVVKYIVWFIVVTTILSKFGISVEGVI
                     ASAGVVGLAVGFGAQTIVKDVITGFFIIFESQFDVGDYVKINNGGTTVAEGTVKSIGL
                     RSTRINTISGELTILPNSSMGEITNYSITNGTAIVKIPVSVDENIDNVEKKLNKLFTS
                     LRSKYYLFVSDPVVIGIDAFEDTRVILRVSAETIPGEGFSGARIIRKEVQKMFLQEGI
                     KTPQPIMTPFNHSENGV"
     gene            4366..4569
                     /locus_tag="O6Y56_002405"
     CDS             4366..4569
                     /locus_tag="O6Y56_002405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF951 domain-containing protein"
                     /protein_id="HDB5575641.1"
                     /translation="MASKYGINDIVEMKKQHACGTNRFKIIRMGADIRIKCENCQRSI
                     MIPRQTFDKKLKKIIVSQDDTQR"
     gene            4581..5678
                     /gene="ychF"
                     /locus_tag="O6Y56_002406"
     CDS             4581..5678
                     /gene="ychF"
                     /locus_tag="O6Y56_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDB5575642.1"
                     /translation="MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIV
                     EVPDARLLKLEEMVQPKKTLPTTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQ
                     VVRAFDDDNVTHVAGRVDPIDDIEVINMELVLADLESVEKRLPRIEKLARQKDKTAEM
                     EVRILTTIKEALENGKPARSIDFNEEDQKWVNQAQLLTSKKMLYIANVGEDEIGDDDN
                     DKVKAIREYAAQEDSEVIVISAKIEEEIATLDDEDKEMFLEDLGIEEPGLDRLIRTTY
                     ELLGLSTYFTAGVQEVRAWTFKQGMTAPQCAGIIHTDFERGFIRAEVTSYDDYVQYGG
                     ESGAKEAGRQRLEGKEYIMQDGDIVHFRFNV"
BASE COUNT         2036 a          845 c         1110 g         1808 t
ORIGIN      
        1 aacatattgc ctgtaccatt ttgtattaaa taaagagctt cactaattgc ctcattatta
       61 gtaatgacag caccagcaat taaatcgcta tgtccactta aaaattttgt agcactatga
      121 atgacaatat cagcgccaag taataaaggt gattgaccta acggtgtcat aaatgtattg
      181 tccacagcta ccagtagttc atgcttttcg gctattttag aaacagcttt gatatcagta
      241 attttaaaac agggattcga tggtgtttcg atataaatta attttgtgtt tgattgaatg
      301 gcgccctcga tttgttcgag cttggtagta tctacggttg taaattcaat attaaaacga
      361 ttcaaaattt gctcagtgag gcgaaaagta ccgccatata catcatcggg taagatgaca
      421 tgatcaccag atttgaaagt caaaagtact gctgaaatag cagcaatacc tgatgcaaaa
      481 gcaaaagcga attttccctg ttctaatcgt gctaacttct cttctaaaag ttcacggtta
      541 gggttgccac ttcgtgcata atcatattta acatcgccac caagacttgt ttgatggaat
      601 gttgaagaat catagagtgg tgggttagct gaatgatatt ccacacctct acgccaatcg
      661 aatatcactt ctgtctcttt tgaaagtgtc atacaatctc tccaatctga gctttatcta
      721 atgcttggat gatatcgcgt tcgatgtctt cataattttc aacgcctagt gataagcgga
      781 ttaaatactc atcaatgcca cgtttatctt tttcagcatc tggcatatca acatgtgttt
      841 gtgtgtaagg gaaggtcact aatgtttcag tacctcctaa actttctgca aagatacaaa
      901 tgtctaaatt ttctaataat ttagcgacgc tataggcctt gttaagtctt aaactaagca
      961 tgccagtttg cccgctatat agtacttcgt caattgcttg aagtgactga cattttttag
     1021 caagttttct tgcgtttgat tgcgcacgct caatgcgtaa atgcaaagtt ttaagtccac
     1081 gtaacaacaa ataactatct attggtgaaa gtgttgcgcc agtcatgttg tgaaaatcaa
     1141 acaactgttg cgcgagtgat tcatctttga cggttacgac acctgctagt acatcgttat
     1201 gtccaccaat atatttcgta gctgaatgta agactatatc agcaccttct gctaatggtg
     1261 ttgaaagata aggtgttaaa aaagtattgt cgataattga caataagcct ttagctttac
     1321 aaagttgata gtacggcttt acatcaatag caatcatttg tgggttagat attggttcaa
     1381 tgaataatgc aactgtttta tcagtgattt ctttttcaac ttgttcataa tctgtaaaat
     1441 caacgtactt aaatttgata tcgtattgtt gctcgtaaaa ttcaaataat ctaaatgtgc
     1501 cgccgtataa atcgaatgaa actaaaattt catcgtgtgg tttaaataaa ttacatatta
     1561 attgaatggc tgacattcca cttgatgtag cgaatgatgc aataccatgc tcaagtttgg
     1621 caaaacaggt ttcaaatgtt gagcgtgtag gatttttagt acgtgtataa tcaaaacctg
     1681 tcgattgtcc tagttttgga tgcttgtagg cagtagataa atggattgga ttcgctatag
     1741 caccggttga atcatcagtt aatgtgattt gggctaactg tgtatccttc atattaagac
     1801 cctcctataa gaaaaaataa aaaaagcttc cgtccttcgt acccgaatga atcggataaa
     1861 aaggacgaaa gcttatgttt cgcggtacca cctttatttg ttattccatc gctgaaataa
     1921 ccttattcag tacgcattaa aagtaaatat gcttactgaa caattatcac aattaaagtc
     1981 agtaagtaag gatatagtaa tgtgatatcc cgtacttatt aacaaaaaat cgtgcgtaaa
     2041 gaatccagta cgccatttaa catcaatgtt aatactgtat cgctataacg ggcgaacccg
     2101 tagacacctc atattggcat caacactcca aggccatttt caaacacgct ttcaaaatct
     2161 tctctcagct actaaagact ctctgtataa gcagggtgtg ttttactttc ctctttattg
     2221 tgtttacgtt tcattaaact gttataagat attaattagc ttacagagta aaaaaagatt
     2281 tgtcaacaat tattcagaaa attttgattt aaaagttaat ttgtttgtga aattgtaatt
     2341 ggtatcttga agttgaaaaa tgaattattt tttaaataaa gtgtggttaa tggttgtctg
     2401 actcatttag aatacataaa atatatttaa ctgttgttat caaataaaaa gtgatgtgag
     2461 tgaattgtca aaaagtgaag atcaacgtat tactaaaaca aaagatgaac aaattaagca
     2521 aatagatata tcggatatca aaccgaatcc gtatcagccc cgaaaaactt tcgatgaaaa
     2581 tcatttaaat gatttggcag attcaattaa gcaatatggt attttgcaac caattgtgct
     2641 tagaaaaaca gttcaaggtt attacattgt agttggtgaa agaaggttta gagcttcgga
     2701 aattgctggt ttaaaatacg tatcagcgat tatcaaagat ttaacagatg aagatatgat
     2761 ggaactggcg gtcatcgaaa atttacaacg agaagactta aatgcgatag aagaagctga
     2821 aagttatcaa cgtttgatga cagatttgaa aattacacaa caagaagtag cgaagcgatt
     2881 gagtaagtcg cgcccgtata tagcgaatat gttgaggtta ttacatttac cgaaaaagat
     2941 tgctgacatg gtaaaagatg ggcgactgac aagtgcacat ggacgaacgt tattggcaat
     3001 taaagatgaa caacaaatgc ttaggttagc gaaacgggtt gttaaagaaa agtggagtgt
     3061 tagatattta gaaaatcatg ttaatgaatt aaaaaatgtt tcgtcaaagt cggaaacaga
     3121 caaagtagat ataactaagc ctaaatttat aaagcaacaa gaacgacagt tgcgagaaca
     3181 gtatggcgca aaagtagata tatcgataaa aaaatcagtc ggcaaaatct catttgagtt
     3241 tgaatcacaa gatgactttg tgagaatcat tgaacaatta aatcgtaagt atggtaaata
     3301 gttacacaat tttatataat atcactttgt gaatctatag atatatcgat agttatctat
     3361 attctttgaa gatgatgcga cttcagtagg ttggaagaat acaacaatat taataaaatt
     3421 atttgagact atatagaagg gagtaacgct aattatggat caagttatga gtattatttc
     3481 atcgctattc gaaccattaa ctaaaattga aacatatgaa agtgtcgcta ctaaattagc
     3541 gatgataatt atatatatta tcgttgcatt aatcgtaatt aaaatacttg ataaaatgat
     3601 tgcccaagga tttaaaatac aaaacaagag taaaaagggt aataaaaaac gttcgaaaac
     3661 attaatatca ttggtgcaaa atgttgttaa atatattgtg tggtttatag ttgtaactac
     3721 cattttaagt aaatttggca ttagtgttga aggggtaatt gccagtgctg gtgtcgtagg
     3781 cttagcagta ggttttggtg ctcaaactat agttaaagac gtaattacag gattctttat
     3841 tatatttgaa agccaatttg atgtaggtga ttatgttaag ataaataacg gtggtacaac
     3901 tgtagcagag ggaacagtta aatcaattgg actccgttca acacgtatta atacaatatc
     3961 tggggaactt acaatcttgc caaatagtag catgggtgaa ataacgaatt actcaattac
     4021 gaatggaaca gcaattgtta aaattccagt atctgtagat gaaaatattg ataatgttga
     4081 gaagaaatta aacaaattat ttacatctct gcgtagtaaa tattatttat ttgtaagtga
     4141 tcctgttgtg attggtattg atgcctttga agatactaga gtaatattaa gggtttcagc
     4201 agaaacaata ccaggtgaag gtttctctgg tgcgcgtatt attcgtaaag aagtacaaaa
     4261 aatgttttta caagaaggca ttaagacacc acaaccaata atgacacctt ttaatcatag
     4321 tgaaaacggt gtttagtagt ttataataca tggaggtcat atttaatggc gtcaaaatat
     4381 ggaataaatg atatagtaga aatgaaaaaa caacatgcgt gtggaaccaa tcgttttaaa
     4441 attattagaa tgggtgctga cattagaatt aagtgtgaaa attgtcaacg aagcattatg
     4501 attccacgtc aaacgtttga taaaaaacta aaaaaaatca tcgtatctca ggatgataca
     4561 caaagatagg agaatgattc atggctttaa cagcaggtat cgttggctta ccaaacgttg
     4621 gtaaatcaac attatttaat gcaattacaa aggcgggtgc attggcagca aactatccgt
     4681 tcgcaactat agacccaaac gtgggtattg tagaagtgcc agatgcaaga ctacttaaat
     4741 tagaagaaat ggttcaacct aaaaaaacat tacctactac atttgaattt acagatattg
     4801 ccggaattgt taaaggtgct tctaaaggtg aaggtttagg taataaattc ttatcacata
     4861 ttagagaagt agatgcaatt tgtcaggttg ttcgtgcttt tgacgatgat aatgtaacac
     4921 atgtagctgg tcgagttgat ccaattgatg acatcgaagt tatcaatatg gaattagtac
     4981 ttgcagactt agaatcagtt gaaaaacgct tacctagaat tgaaaaattg gcacgtcaaa
     5041 aagataagac tgctgaaatg gaagtgcgta ttttaacaac tattaaagaa gctttagaaa
     5101 atggtaaacc cgctcgtagt attgacttta atgaagaaga tcaaaaatgg gtgaatcaag
     5161 cgcaattact gacttctaaa aaaatgcttt atatcgctaa tgttggtgaa gatgaaattg
     5221 gtgatgatga taatgataaa gtaaaagcga ttcgtgaata tgcagcgcaa gaagactctg
     5281 aagtgattgt tattagtgca aaaattgaag aagaaattgc tacattagat gatgaagata
     5341 aagaaatgtt cttagaagat ttaggtatcg aagaaccagg attagatcga ttaattagaa
     5401 caacttatga attattagga ttatcaacat attttactgc tggtgtgcaa gaagtacgtg
     5461 cttggacgtt taaacaaggt atgactgcac ctcaatgtgc tggtatcatt catactgatt
     5521 ttgaacgtgg atttatccgt gccgaagtaa caagttatga cgactatgta caatatggcg
     5581 gcgaaagtgg cgctaaagaa gcgggcagac aacgattaga aggtaaagaa tatattatgc
     5641 aagatggcga tatcgttcat ttcagattta atgtataaac gatagagtca agttaattaa
     5701 atagtatata tgtagaagag gcggaatcaa ttgttcgcct cttttaatta tgcgtataat
     5761 ttattaaaag aatggaataa ttttactcgc gttaataat
//
LOCUS       DALMNS010000128         5759 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.128, whole genome shotgun sequence.
ACCESSION   DALMNS010000128 DALMNS010000000
VERSION     DALMNS010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5759
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.128"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(163..1767)
                     /locus_tag="O6Y56_002407"
     CDS             complement(163..1767)
                     /locus_tag="O6Y56_002407"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDB5575643.1"
                     /translation="MKQFNVLVADPISKDGIKALLDHEQFNVDIQTGLSEEALIKIIP
                     SYHALIVRSQTTVTENIINAADSLKVIARAGVGVDNINIDAATLKGILVINAPDGNTI
                     SATEHSLAMLLSMARNIPQAHQSLTNKEWNRNAFKGTELYHKTLGVIGAGRIGLGVAK
                     RAQSFGMKILAFDPYLTDEKAKSLSITKATVDEIAQHSDFVTLHTPLTPKTKGLINAD
                     FFAKAKPSLQIINVARGGIIDEKALIKALDEGQISRAAIDVFEHEPATDSPLVAHDKI
                     IVTPHLGASTVEAQEKVAISVSNEIIEILIDGTVTHAVNAPKMDLSNIDDTVKSFINL
                     SQTVGELAIQLMYNAPSSIKITYGGDLASIDSSLLTRTIITHILKDDLGPEVNIINAL
                     MLLNQQQVTLNIENNKAETGFSNYLEVELSNDSDSVKVGASVFTGFGPRIVRINNFSV
                     DLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTEAGGDALMILSVDQPV
                     SNNIIDELKQVGEYNQIFTTELTVQS"
     gene            complement(1754..2914)
                     /locus_tag="O6Y56_002408"
     CDS             complement(1754..2914)
                     /locus_tag="O6Y56_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HDB5575644.1"
                     /translation="MYYHQPLLLTPGPTPVPDAIMREIQAPMVGHRSKDFEDIAQQAF
                     QGLKPIFGSQNDVLILTSSGTSVLEASMLNIVNPEDHFVVIVSGAFGNRFKQTAQTYY
                     KNVHIYDVTWGEAVDVKDFINFLSTLNVEVKAVFSQYCETSTTVLHPIHELGNAINQF
                     NSNIYFVVDGVSCIGAVDVDINKDKIDVLVSGSQKAIMLPPGLAFVAYSHRAKERFKE
                     VTTPKFYLDLNKYISSQADNSTPFTPNVSLFRGVNAYVETVKAEGFNHVIARHYAIRN
                     ALRSALKALDLTLLVNDKDASPTVTAFKPNTNDEVKIIKDELKNRFKITIAGGQGHLK
                     GQILRIGHMGKISPFDILSVVSALEIILTEHRKVNYIGKGISKYMEVIHEAI"
     gene            complement(3029..3475)
                     /locus_tag="O6Y56_002409"
     CDS             complement(3029..3475)
                     /locus_tag="O6Y56_002409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HDB5575645.1"
                     /translation="MHQHDFKVQTSWQGGRNNVGNVRGDILSENISIPASLGGVGIGT
                     NPDEMLVSAASSCYIISLAATLERAKFTDISIEQQSIGTACLNNGKFSMSKIVHHPHI
                     EIPSDQIAQLEKRLPKLITIADNNCMISNAVRNNVDIKIYPIIQAK"
     gene            3555..4298
                     /locus_tag="O6Y56_002410"
     CDS             3555..4298
                     /locus_tag="O6Y56_002410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HDB5575646.1"
                     /translation="MTLNKLKDELQIVSHRGLPSDFPENTMVGYREVMGLNVAMLEID
                     VHLTKDQHFVVIHDETIDRTSDGKGRIADYTLSQLKSFDFGIYKDVAFKGERIPTLDE
                     VLSLCLKFDKKLLIELKSPNLYPGIECKLLAFLEEKKVDATQVVIQSFDIECIEKLNT
                     LGSIYELGVLCSKRKYWYKKPNFSRIAQIASYVNPNYALVTRKFVDEAHHHQLQVMPY
                     TVNKLKTGEKLRQMGVDGLITDNPKLFIK"
     gene            complement(4514..5116)
                     /gene="rpsD"
                     /locus_tag="O6Y56_002411"
     CDS             complement(4514..5116)
                     /gene="rpsD"
                     /locus_tag="O6Y56_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDB5575647.1"
                     /translation="MARFRGSNWKKSRRLGISLSGTGKELEKRPYAPGQHGPNQRKKL
                     SEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSLG
                     LARTRRQARQLVNHGHILVDGKRVDIPSYSVKPGQTISVREKSQKLNIIVESVEINNF
                     VPEYLNFDADSLTGTFVRLPERSELPAEINEQLIVEYYSR"
     gene            complement(5360..>5759)
                     /locus_tag="O6Y56_002412"
     CDS             complement(5360..>5759)
                     /locus_tag="O6Y56_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HDB5575648.1"
                     /translation="EHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHP
                     ACVHIPIGKGVCGTAVSERRTQVVADVHQFEGHIACDANSKSEIVVPIFKDDKIIGVL
                     DIDAPIRNRFDDNDKEHLEAIVKIIEKQLA"
BASE COUNT         1848 a          956 c          983 g         1972 t
ORIGIN      
        1 atataaggaa aatagcagct caacgagctg tacattataa aatacatatc aaaaaagctg
       61 atttctatca aataattaat agaaatcagc ttttttacat tgcctaagaa cttaatgtcc
      121 caagccaatg tcttcttggc attttgaatt tacataaata gtttatgact gtaccgtcaa
      181 ttcagttgtg aaaatttgat tgtattcacc aacttgttta agttcatcaa ttatattgtt
      241 tgaaacaggt tgatcaacgg ataaaatcat tagcgcatct ccgcccgctt cagttctacc
      301 taaagtcata gatgcaatgt tgatattgta tttacctaac aatgcgccag ttttacctac
      361 catacccggg gtatcattat gatatgacac aatttgatat tgatttggct ttaagtctac
      421 agaaaaatta ttaattctaa caattcttgg accgaaacct gtaaagacag aagcgccaac
      481 tttaacggaa tcgctatcgt ttgatagttc tacctctaag tagttactaa aacctgtctc
      541 tgctttatta ttttcaatat ttaatgtcac ttgttgttga tttaacagca ttagagcatt
      601 gataatattg acttcaggac caagatcatc ttttaaaata tgagtaataa ttgtacgtgt
      661 taataaacta ctatcaatag aggctaagtc gccaccgtat gtaattttaa tagagcttgg
      721 tgcattatac attaattgaa tagctaattc accaactgtt tggcttaaat tgatgaatga
      781 ttttacagta tcatctatat tgcttaagtc cattttaggt gcattcactg catgcgttac
      841 agtaccatca attaaaattt cgatgatttc atttgaaaca gaaattgcca ctttttcttg
      901 agcttcgact gttgaagcac ccaaatgagg tgtaacaata attttatcat gtgcaacaag
      961 aggcgaatca gttgcaggtt catgttcaaa cacatcgata gctgcccgac taatttgtcc
     1021 ttcgtctaat gcttttatta acgccttttc atcaataata ccaccacgtg ccacattgat
     1081 tatttgcaaa ctaggttttg ctttggcaaa aaagtcagca ttaattaagc cttttgtttt
     1141 aggtgttagt ggtgtatgca atgtaacgaa atcagaatgt tgggcaatct catcaactgt
     1201 tgccttcgta atgcttaaag attttgcttt ttcatccgtt aagtaagggt caaaagctag
     1261 tattttcatt ccgaaacttt gcgcacgttt agcaacacct aaaccaattc taccagcacc
     1321 aatgacacct aatgttttat gataaagctc agtaccttta aatgcatttc gattccattc
     1381 tttatttgta agtgattggt gtgcttgcgg aatatttcga gccattgata ataacattgc
     1441 tagtgaatgt tcagtagctg aaatcgtatt accatctggg gcattaataa ctaaaatacc
     1501 ttttaatgtt gcagcatcaa tattaatatt atctacacca acaccggcgc gtgcgattac
     1561 ttttaaagaa tcagcagcat ttatgatatt ttcagtaacc gtagtttgac tacgaacgat
     1621 taaagcatgg tatgaaggta taattttgat taatgcttct tcggacaagc cagtttgaat
     1681 atctacattg aattgttcgt gatctaataa tgctttgata ccatcttttg atataggatc
     1741 tgcaacgagt acattaaatt gcttcatgaa taacctccat atattttgat atacctttac
     1801 cgatatagtt aactttacgg tgttcagtta aaataatttc taaagcagat actaccgata
     1861 aaatatcgaa aggactaatt ttccccatat gaccaattct taaaatttga cctttaagat
     1921 ggccttgacc accagcaatt gttattttaa agcgattttt aagttcatct ttgattattt
     1981 tcacttcatc atttgtgtta ggtttgaatg ccgtaaccgt tggagatgca tctttatcat
     2041 tgactaataa agttaaatct aatgctttta aggcgcttct taatgcattt ctaattgcgt
     2101 agtgtcgtgc tattacgtga ttgaaacctt ctgcttttac ggtttcaacg tatgcattta
     2161 cacctctaaa taaagacaca tttggtgtga acggtgtaga attgtcagct tgtgacgaaa
     2221 tgtatttatt taagtctaga taaaattttg gtgtagttac ttctttgaaa cgttcttttg
     2281 cacggtggct ataagctaca aaagctaatc ctggaggtaa cataattgct ttttgactac
     2341 cagaaacaag tacatcaatt ttatctttgt taatgtcaac atcaacagca ccaatgcaac
     2401 ttacgccgtc aactacaaaa taaatattac tattaaattg attgatggca tttcctaact
     2461 cgtgaatagg gtgtagcact gtcgtagatg tttcgcaata ttgactaaat actgctttaa
     2521 cttcaacatt taaagttgaa aggaaattga tgaaatcttt gacatctaca gcttctcccc
     2581 atgttacgtc ataaatgtgc acatttttgt aataagtttg tgcagtttgt ttaaatcggt
     2641 taccaaaggc acctgaaaca atgacaacga agtgatcttc agggtttaca atgttcagca
     2701 tactagcttc taagacgctt gtaccgctag atgttaaaat aagtacatca ttttgactcc
     2761 caaatattgg ctttagacct tgaaatgctt gttgtgcgat gtcttcaaaa tctttagaac
     2821 gatgaccaac cataggtgct tgaatttctc tcataatggc atcaggtaca ggggttgggc
     2881 caggtgttaa taacaacggt tgatgataat acatttatat gcctcctata aataagattt
     2941 cactatttta gcaaattttc tgaaaattta aaagcctaaa aatagtgata acactatatt
     3001 gtcgaacaaa tgttatcact taacgatttt atttggcctg aatgatggga tagattttta
     3061 tgtccacatt atttcttaca gcatttgaaa tcatgcaatt attatctgca attgttatca
     3121 attttggtaa tcgcttttct aattgtgcta tttgatcact tggaatttca atgtgaggat
     3181 ggtgcacaat ttttgacata ctgaattttc cattatttaa acaagctgtt ccaatcgatt
     3241 gttgttcaat tgaaatatct gtgaactttg cacgttcaag agtagctgct aatgagatga
     3301 tataacatga tgaagcggct gatactaaca tttcatcggg atttgttcct ataccaacac
     3361 cacctaaaga agcaggtatt gaaatattct ctgaaagtat gtcgcctcga acgtttccga
     3421 cattgttacg accaccttgc caagaagttt ggactttaaa gtcatgttga tgcaattgct
     3481 ttaacctcca atataattgt gatagtttaa ttttagaata gtttatcaaa gtttaacaga
     3541 aaggtgactt atcaatgact ctgaataaac tgaaagatga attacaaatt gtttcgcacc
     3601 gtggattgcc gagtgatttt cctgaaaata caatggtcgg ttatcgagag gtaatggggc
     3661 tcaatgttgc tatgttagaa atagatgttc atttgaccaa agaccaacat tttgttgtga
     3721 tacatgatga aacaattgat agaacatcgg atggtaaggg gcgtattgct gattacacat
     3781 tatcgcaatt aaaatcattt gattttggta tttataaaga tgttgctttt aagggagaac
     3841 gaatacccac gttagatgaa gtactttcat tatgcttaaa gtttgataaa aagctattga
     3901 tcgaattgaa aagtccgaat ttatatccag gaatagaatg taaattgctg gcatttttgg
     3961 aagaaaagaa agtcgatgcg acacaagtag ttatacaatc ttttgatatc gaatgcattg
     4021 aaaagttaaa cacattaggc agtatatatg aattaggtgt gctttgtagt aaacgtaagt
     4081 attggtataa aaagccaaac ttttcaagaa ttgctcaaat tgctagttat gttaatccta
     4141 attatgcatt agtgaccaga aaatttgttg atgaagcaca tcatcatcaa ttacaagtta
     4201 tgccatacac agttaataaa ttgaaaactg gagaaaaatt aagacaaatg ggtgtagatg
     4261 gattaattac agataatccg aaattattta ttaagtgaga cgatgaaagg ttatttgata
     4321 gagggatgag gattcgtata tcgcaattga taattttaaa aagtaatgat gaaatactat
     4381 agataattca acaaataaga cttgtaaatt ctaagttgat tgtaaaatag ggtaactcca
     4441 tataatcttg aatctatcat ttttaaatta ataaaaaaac acccacaatt gtgggtgttt
     4501 gtattgaacg gtattatctt gagtagtact caacgattaa ttgttcgtta atttcagcag
     4561 gtaattcgct acgttctggt aaacgtacga aagtaccagt taagctgtca gcatcaaagt
     4621 ttaagtactc aggtacgaaa ttgttgattt caactgattc aacgatgatg tttaattttt
     4681 gagatttttc acgaactgaa attgtttgac caggtttaac agaataagat ggaatatcaa
     4741 cacgtttacc atctactaag atatgaccgt ggttaactaa ttgacgtgct tgacgacgag
     4801 tacgagctaa acctaatgaa taaacaacag cgtctaaacg acttgctaat aagatcatga
     4861 agttttcacc gtgtacaccg aattttttac cagcgatgtc aaatgtgtta cggaattgtc
     4921 tttcagtcat tccatataag taacgtaatt tttgtttttc acgtaattgt aaaccatatt
     4981 ctgataattt tttacgttgg tttggaccat gttgtcctgg tgcgtaagga cgtttttcta
     5041 attctttacc agtaccgctt aaagagatac ctaaacgacg agattttttc cagtttgaac
     5101 ctctgaatcg agccataata agactcctcc tttaattctt ttttgttgtt atgaataaac
     5161 aaaaaagagt gttgcatgct tactaagata tattgtttta tgtgtcttca ccttatagcg
     5221 acagttacgt gacacgtccg cattgggaac agcatagcgc tcaataatat acaactgcta
     5281 ctttcgttaa ttcacacaaa atttattgta acattttcct gctaactgtc aacactttat
     5341 tgaaaatgct gatgtccttt tatgcgagtt gcttttcaat aattttaaca attgcttcaa
     5401 gatgttcctt gtcattgtca tcaaatcgat tccttatagg ggcatcgata tctaagacac
     5461 cgataatttt atcatctttg aaaattggaa cgacaatttc agacttacta ttagcatcac
     5521 aagcgatatg tccttcgaat tgatgaacat cagctacaac ttgtgtacga cgttctgaaa
     5581 cggctgtacc acatacacct tttccaattg gaatgtggac acaagctggg tgtccttgga
     5641 aaggtccaag tataagttca ttttgttcca ataagtaaaa gccgacccaa ttaatttgat
     5701 ctagattatc atttaataat gcagacatgt tacttaaaat agcaatcatg tgatgttca
//
LOCUS       DALMNS010000129         5310 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.129, whole genome shotgun sequence.
ACCESSION   DALMNS010000129 DALMNS010000000
VERSION     DALMNS010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 5310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5310
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.129"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            44..1003
                     /locus_tag="O6Y56_002413"
     CDS             44..1003
                     /locus_tag="O6Y56_002413"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HDB5575649.1"
                     /translation="MKTFGKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVK
                     ADVQDLNHGTVHSPSPVDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIM
                     KSIVKSVMDSGFDGYFLIAANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLIS
                     QELGVAPSSVDASIIGEHGDTELAVWSQANVAGISVYDTLKEQTGSEAKAEEIYVNTR
                     DAAYEIIQAKGSTYYGIALALMRISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPT
                     LVNQHGAVKIYEMPLSAEEQALFDKSVKTLEDTFDSIKYLLED"
     gene            1281..1985
                     /gene="budA"
                     /locus_tag="O6Y56_002414"
     CDS             1281..1985
                     /gene="budA"
                     /locus_tag="O6Y56_002414"
                     /EC_number="4.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HDB5575650.1"
                     /translation="MTNVLYQHGTLGTLMAGLLEGTATINELLEHGNLGIATLTGSDG
                     EVIFLDGKAYHANEHKEFIELKGDEKVPYASITNFKASKTFPLQQLSQDDVFAQIKNE
                     MLSENLFSAVKIYGTFKHMHVRMMPAQQPPYTRLIDSARRQPEEKRQDIRGAIVGFFT
                     PELFHGVGSAGFHIHFADDERAYGGHVLDFEVDDVVVEIQNFETFQQHFPVNNETFVK
                     AKIDYKDVAEEIREAE"
     gene            complement(2071..2931)
                     /locus_tag="O6Y56_002415"
     CDS             complement(2071..2931)
                     /locus_tag="O6Y56_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDB5575651.1"
                     /translation="MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPH
                     APAQDIVVKGYEDVTNTFDVIIIAVKTHQLDAVIPHLTHLAHEDTLIILAQNGYGQLE
                     HIPFKNVCQAVVYISGQKKGDVVTHFRDYQLRIQDNALTRQFRDLVQDSQIDIVLEAN
                     IQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRTLCRQLLLDGCRVAQAEGLNFSE
                     QTVDTIMTIYQGYPDEMGTSMYYDIVHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIY
                     SFLRAYQQNM"
     gene            3004..3822
                     /gene="panB"
                     /locus_tag="O6Y56_002416"
     CDS             3004..3822
                     /gene="panB"
                     /locus_tag="O6Y56_002416"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HDB5575652.1"
                     /translation="MKTVSQLIDMKQKQTKISMVTAYDFPSAKQVEAAGIDMILVGDS
                     LGMTVLGYESTVQVTLADMIHHGRAVRRGAPNTFVVVDMPIGAVGISMTQDLNHALKL
                     YQETNANAIKAEGAHITPFIEKATAIGIPVVAHLGLTPQSVGVMGYKLQGATKEAAEQ
                     LILDAKNVEQAGAVALVLEAIPNDLAEEISKHLTIPVIGIGAGKGTDGQVLVYHDMLN
                     YGVEHKAKFVKQFADFSVGVDGLKQYDQEVKSGAFPSEEYTYKKKIMNEVNNND"
     gene            3815..4666
                     /locus_tag="O6Y56_002417"
     CDS             3815..4666
                     /locus_tag="O6Y56_002417"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HDB5575653.1"
                     /translation="MTKLITTVKEMQHIVKAAKRSGTTIGFIPTMGALHDGHLTMVRE
                     SVSTNDITVVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEVGADIVFHPAVEDMYPG
                     ELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQ
                     MVKDFNHAVEIIGIDIVREADGLAKSSRNVYLTEQERQEAVHLSKSLLLAQALYQDGE
                     RQSKVIIDRVTQYLESHISGRIEEVAVYSYPQLVEQHEITGRIFISLAVKFSKARLID
                     NIIIGAE"
     gene            4668..5051
                     /locus_tag="O6Y56_002418"
     CDS             4668..5051
                     /locus_tag="O6Y56_002418"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015901315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HDB5575654.1"
                     /translation="MIRTMMNAKIHRARVTESNLNYVGSITIDSDILEAVDILPNEKV
                     AIVNNNNGARFETYVIAGERGSGKICLNGAASRLVEVGDVVIIMTYAQLNEEEIKHHA
                     PKVAVMNEDNVIIEMIHEKENTIVL"
BASE COUNT         1823 a          745 c         1122 g         1620 t
ORIGIN      
        1 agtcacgtgt aaaataaatt caattaggtt aggagacata attatgaaaa catttggtaa
       61 aaaggttgta ttaatcggag atggatctgt aggatcaagc tatgcctttg caatggttac
      121 gcaaggtgtt gctgatgaat ttgtaattat tgacattgca aaagacaaag taaaagcaga
      181 tgttcaagat ttaaaccatg gtacagtcca cagtccttca ccagttgatg tgaaagcagg
      241 tgaatacgaa gactgtaaag atgcagattt agttgttatt acagctggtg cacctcaaaa
      301 gccaggtgaa acacgtttac aattagttga aaaaaatact aagattatga agagcattgt
      361 taagagtgtt atggatagcg gctttgatgg atatttctta atcgcggcaa accctgtaga
      421 cattttaaca agatttgtaa aagaatatac tggattacca gcagaacgtg ttatcggttc
      481 aggtactgta ttggacagtg cacgtttaca atatttaatt agccaagaac ttggtgttgc
      541 accttcaagt gttgacgcta gtattattgg tgagcatggt gatactgaac ttgcagtttg
      601 gtcacaagca aatgtagcag gtatttcagt atatgacaca ttaaaagaac aaactggtag
      661 cgaagctaaa gcggaagaaa tttatgtaaa tacacgtgac gctgcttatg aaattatcca
      721 agctaaaggg tcaacatact atggtattgc attagcattg atgcgcattt caaaagccat
      781 tttaaataat gaaaataatg tcttaaatgt ttctatacaa ttagatggtc aatatggtgg
      841 tcacaaaggc gtttacctag gtgtaccaac attagttaac caacatggcg cagttaaaat
      901 ttatgaaatg ccattaagtg cagaagaaca agcattgttc gataaatctg ttaaaacatt
      961 agaagataca tttgattcaa ttaaatattt attagaagac taagcctatt ttaagtgtta
     1021 attagaaata tattaatggt aagaggatct attagtgttg cagtaaaatg tggcactgat
     1081 aggtccattt ttttagcaag cattgataga ggcaatactt ttgcgtaaaa taataattga
     1141 ataaagtatt atgactcgtg aaaatttagt gacatgaata gaaatgtcga ggcgtcattg
     1201 agtataaagg aaagtagttc tgcattaagc acgaagtaga gcatgacaac gaggaataac
     1261 tatagggaga tggttttgga atgacgaatg tcttgtatca acatggtaca ttaggtacgt
     1321 taatggctgg cttactagaa ggaacagcta caattaatga attgttagaa catggaaatt
     1381 tagggattgc aacgttaaca gggtctgatg gcgaagtaat atttttagac gggaaggcat
     1441 atcatgctaa cgagcataaa gaatttatag aattaaaagg cgatgagaaa gtaccgtatg
     1501 catcgattac taattttaaa gcgagtaaga catttccatt gcaacaatta tcacaagatg
     1561 atgtattcgc acaaattaaa aatgaaatgt taagtgagaa tttattttcg gctgttaaaa
     1621 tttatggcac atttaaacat atgcatgtac gaatgatgcc tgctcagcaa ccgccatata
     1681 cacgtttgat tgattcagca cgcagacaac ctgaggaaaa aagacaagat attcgtggtg
     1741 ccattgttgg attttttaca ccagaattat ttcatggcgt agggtctgct ggttttcata
     1801 tacattttgc ggatgatgaa agagcttatg gtggacatgt tcttgacttt gaagtggatg
     1861 acgttgtcgt tgagatacaa aactttgaaa cattccaaca acatttcccg gtaaataacg
     1921 agacgtttgt taaagcgaaa atagactata aagatgtggc agaagaaatt agagaagctg
     1981 aatagtctaa tataattaaa agaccttagc gatattagga acaggtggtt ctaaatgcat
     2041 cgttaaggtc tttttatatt atatatgtgc ttacatattt tgttgataag cgcgtaaaaa
     2101 gctataaata gtatcaagat atggggtgtc aagattgtgt tcacgtgcac gtcgataaat
     2161 aaagccttga atcgcttcga cttcaagagg ttgctgatgc acaatgtcgt aatacatgct
     2221 cgttcccatt tcgtcgggat aaccttgata tatagtcata atagtatcga cagtttgttc
     2281 tgaaaagttt aacccctctg cctgtgcaac acgacaacca tctagtaata actgtctaca
     2341 cagtgtacgt atttcaggat tatgcatgat tgcaactgtc tgtctcccga gtgctgtgat
     2401 agaattaatg cccaagttaa ctaacaattt ataccaaata gcttgttgaa tatttgcttc
     2461 taatacaatg tcgatttgac tgtcttggac caaatctcta aattgtcgtg ttaatgcatt
     2521 atcttgtata cgtaattgat aatctctgaa gtgcgtaaca acatcgcctt tcttttgacc
     2581 acttatatag acaactgctt ggcatacatt tttaaatgga atatgttcga gttgaccata
     2641 accattttgg gctaaaatga tgagcgtgtc ctcatgtgca agatgagtta aatgaggaat
     2701 aacggcatca agttgatgtg ttttgaccgc aataataata acatcaaatg tgtttgtgac
     2761 atcttcataa cctttcacaa caatatcttg tgcaggtgca tgtggtacag tataatatgt
     2821 tattgttttg gcgtgtctcc cgataagcgt tgtatgaggc aatgattgtt gtaattcata
     2881 ggcaatagtt gtaccgacag cgcctgggcc gataatcgca actgataaca tcttcttctt
     2941 tcctttctat aaaagattca ttatactatt tctaataata ctgcaaaaag aggttgaata
     3001 acattgaaaa cagtaagtca attaatagat atgaaacaaa agcaaactaa aatttctatg
     3061 gtaacagctt atgattttcc aagtgctaaa caagtggaag cagcgggtat tgatatgatt
     3121 cttgttgggg attcacttgg tatgactgta ttaggttatg aaagtaccgt acaagtgacg
     3181 ttagcagata tgattcatca cggtcgtgca gtaagaagag gcgcaccaaa tacatttgta
     3241 gttgttgata tgccgattgg tgcagtaggc atctctatga cacaagactt aaatcatgct
     3301 ctaaagcttt atcaggagac gaatgcaaat gcaattaaag cagaaggagc gcatattaca
     3361 ccatttattg aaaaagcaac ggcaattggt attcctgttg ttgcacattt aggattaaca
     3421 cctcaaagtg ttggcgttat ggggtataaa ttacaaggtg caacgaaaga agcagcggag
     3481 caacttattt tagatgcgaa aaatgtagaa caagctggtg cagttgcgtt agtacttgaa
     3541 gcaattccaa atgatttagc agaggaaatt agcaagcact taacaattcc agtcattggt
     3601 attggtgcag gaaaaggtac agatggtcaa gtattggttt atcacgatat gttaaattat
     3661 ggtgttgaac ataaagcgaa atttgtgaag caatttgctg attttagtgt tggtgtggat
     3721 ggtttaaagc aatacgatca agaagttaaa tctggtgcat ttccatcaga agaatatacg
     3781 tataaaaaga aaattatgaa tgaggttaat aacaatgact aagctgatta ctacggtaaa
     3841 agagatgcaa cacattgtta aagcagccaa acgctcagga acaacgattg gttttatccc
     3901 aacaatgggt gccttacatg atggacattt aacgatggta cgcgaatcag ttagtacaaa
     3961 tgatattaca gttgtgagtg tatttgttaa tccattacaa tttggtccaa acgaagattt
     4021 cgatgcttat ccgagacaaa ttgataaaga tttagaatta gtatcagaag taggggcgga
     4081 cattgttttt catcctgcag tagaagatat gtatccaggt gaattaggta ttgatgtcaa
     4141 agtaggtcca ttagctgatg tgttagaagg agcgaagcgt ccagggcatt ttgatggggt
     4201 ggtaacagta gttaataagc tatttaatat tgttatgccg gattatgctt attttggtaa
     4261 aaaagatgcc cagcaattgg ctattgtcga gcaaatggta aaagacttca atcatgccgt
     4321 tgaaattatt ggtattgata tcgttcgaga agcagatggt ttggcgaaaa gttcaagaaa
     4381 tgtttattta acggagcaag aacgacaaga agcggtacat ttaagtaaaa gtttgctatt
     4441 agcacaagcg ttgtatcaag acggtgaacg tcaaagtaaa gtaattatag acagggttac
     4501 tcaatatctt gaatcacata taagtggacg cattgaagaa gttgctgttt atagttatcc
     4561 tcaattagta gaacaacatg aaataactgg acgcatattt atctcgttag ctgtcaaatt
     4621 ttcaaaagcg cgtttaatag ataatataat aattggagct gaataaagtg ataagaacaa
     4681 tgatgaatgc taaaattcat agagcaagag tgactgagtc aaatttaaat tatgtaggta
     4741 gcattacgat tgattcagat atattggaag cggtagacat cttgccaaat gaaaaagtag
     4801 ccatcgtgaa taataataat ggtgcacgtt ttgaaacata cgtaatagct ggtgaaagag
     4861 gtagtggtaa aatttgttta aacggtgcag catcaagact tgttgaagta ggcgatgtag
     4921 tcataatcat gacttatgca cagttgaatg aagaagaaat taaacaccat gcacctaaag
     4981 tagcagtaat gaatgaagac aatgtcatta ttgaaatgat tcatgaaaaa gaaaatacga
     5041 tagtgttata aaatagtata agttagaaac ctctagtaga taacaatgta gttatccatt
     5101 aggggttttt atttttatgc caattgggtt agcgtaagaa aatcatatgt attattgtta
     5161 caattttagc agtgtttaat gatggtcata tttataaaga aatagttttg cgaattgatt
     5221 atctaaaaca gtattcagaa tttatttggt agaaaataga attcttaact taacgagata
     5281 agttaatgac atgttgttta gtttcgtgaa
//
LOCUS       DALMNS010000130         4742 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.130, whole genome shotgun sequence.
ACCESSION   DALMNS010000130 DALMNS010000000
VERSION     DALMNS010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4742)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4742)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4742
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.130"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            1318..2187
                     /locus_tag="O6Y56_002419"
     CDS             1318..2187
                     /locus_tag="O6Y56_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001810626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HDB5575655.1"
                     /translation="MEMSRLNLTDDNDINEIIAWRGEQEELEQKRDTYKKCYHEFEME
                     IARLESLTKDKELLDSDKLIDEYELKKGKMNTLIDEYSAVHYQCQNNIKKTQSIVSHI
                     NYLNQELKNQQEIFQLAEIVSGKNNKNLTLENFVLIYYLDQIIAQANLRLATMSDNRY
                     QLIRREAVSHGLSGLEIDVFDLHSNKSRHISSLSGGETFQSSLALALGLSEIVQQQSG
                     GISLESIFIDEGFGTLDQETLETALDTLLNLKSTGRMVGIISHVSELKNRIPLVLEVK
                     SDQYQSSTRFKRN"
     gene            complement(2258..2620)
                     /gene="mscL"
                     /locus_tag="O6Y56_002420"
     CDS             complement(2258..2620)
                     /gene="mscL"
                     /locus_tag="O6Y56_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HDB5575656.1"
                     /translation="MLKEFKEFALKGNVLDLAIAVVMGAAFNKIISSLVENIIMPLIG
                     KIFGSVDFAKEWSFWGIKYGLFIQSVIDFIIIAFALFIFVKIANTLMKKEEAEEEAVV
                     EENVVLLTEIRDLLREKK"
     gene            2824..4470
                     /locus_tag="O6Y56_002421"
     CDS             2824..4470
                     /locus_tag="O6Y56_002421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDB5575657.1"
                     /translation="MNSSSPENPNGKKYSPVFIYSAIVVAIVVLLGAFLPEQFNYVTN
                     NIKMWITEKLGWYYLILTTIIVFFCIFLIFSPIGKLKLGKPNDKPEFNTISWFAMLFS
                     AGMGIGLVFYGAAEPMAHFATPPTADPKTTEAYTEALRSTFFHWGFHAWAVYGVVALA
                     LAYSQFRKGEPGLLSRTLRPLLGDKVEGPIGIFIDVLSVFATIVGVAVSLGMGALQIN
                     GGLHYLFNVPNNTFVQAIIIIVVTILFIASAWSGLSKGIQYLSNLNIGLGTILMVAAL
                     IVGPTVLILNMLTSSTGSLLNTFLFNSFDTAALNPQKREWMSSWTLYYWGWWLSWSPF
                     VGVFIARVSKGRSIREFISGVLLVPAIVSFVWFSVFGVLGIETGKKHKEIFDMTPETQ
                     LFGVFNHVPFGIVLSLIALLLIASFFITSADSATFVLGMQTTFGSLNPSSMVKVVWGI
                     SQALIAFVLLLAGGGNGAEALNAIQSAAIISAFPFSFVVILMMVSFYKDANQERKFLG
                     LTLTPNKHRLQEYIKSQQEDYESDILEKRQSRRNIEKKDN"
BASE COUNT         1753 a          639 c          819 g         1531 t
ORIGIN      
        1 caactcaaca aaaataaaat tgatttcgtt caattgaaag agcaacaacc tgaaatagag
       61 gaaattgaag ctaagttaaa gttgttacaa gatattacaa acctattgaa ttatattgaa
      121 aatagagaaa aaattgaaag caaaattgct aatagcaaaa aagatatttc taaaaccaat
      181 aataaaatat tgaatcttga ttgtgataaa cgaaacatag acaaagagaa aaaaatgtta
      241 gaagaaaacg gagatttaat tgaaagtaaa atctctttta ttgataaaac tagagtatta
      301 tttaacgata tttataagta tcaacaaagt tatctcaata ttgaacgctt gagaactgag
      361 ggtgaacaat taggtgatga attaaataat ctaatcaaag gtttagaaaa ggtcgaaaat
      421 tcaataggta ataatgaaag tgattacgag aaaattatcg aactaaataa tgcgataact
      481 aacataaata atgaaattaa tgtaattaaa gaaaatgaaa aagctaaagc tgaattagat
      541 aaactattag gtagtaagca agagttagag aatcaaatta atgaagaaaa aactatattg
      601 aagaatctcg aaataaaatt agaacgctac gataaatcaa aattggactt aaatgataaa
      661 gaaagcttta taagtgaaat taaatctgct gtaaagattg gagatcaatg tccgatatgt
      721 ggtaatgaaa ttcaggattt agggcatcat attgattttg acagtattgc taaacgtcaa
      781 aatgaaatta aagaaattga agcaaatatc cacactatga aatcgaatat tgctgtgcat
      841 aattctgaaa ttaaatttgt taatgaaaaa atatcgaata ttaatattaa aacgcaaagt
      901 gatctttcac tcgaagtatt gaataagcgt ctgctagaaa atgaaaatgc attgaataat
      961 caaagagatc ttaataaatt tatagaacaa atgaaagaag aaaaagataa tctaacgttg
     1021 caaattcata ataaacaatt gcgtctaaat aaaaatgaat ctgagttgaa attatgtcga
     1081 gatctcatca ctgaatttga aacactctca aaatataata atatcactaa ttttgaagtg
     1141 gattataaga agtatgttca agatgtgaat caacatcaag aacactcaaa ggagattgaa
     1201 gataagttaa tacaattgtc tcaaagaaag ttaattgagc aaaataatct aaatcactat
     1261 gaaaatcaac tagaaactta caataatgac ttagaattga atgaacagtc tattgaaatg
     1321 gaaatgtcga ggctgaattt aactgatgac aatgatataa atgaaataat agcctggagg
     1381 ggcgagcaag aggaattaga gcagaaaagg gatacttata aaaaatgtta tcatgaattt
     1441 gaaatggaaa tagctaggtt agaatcatta accaaggata aagagttatt ggactctgat
     1501 aaattaatag atgaatatga actgaaaaaa ggaaagatga atacactgat agatgaatac
     1561 tctgctgttc attatcaatg tcaaaataat attaaaaaaa cacaatctat agtttcgcat
     1621 attaattact taaatcaaga attaaagaat caacaagaaa tatttcaatt ggctgagatt
     1681 gtcagtggta agaacaacaa aaatcttaca ttggaaaact ttgtcttaat ttactattta
     1741 gatcaaatta ttgctcaagc aaatctgaga ttagcaacaa tgtcagataa tcgataccaa
     1801 ctaattaggc gagaagcggt ttctcatggt cttagtggcc tagaaattga tgtatttgat
     1861 ttgcattcaa ataagtctag acatattagc tcgttatcag gtggagaaac tttccaatcg
     1921 tcgcttgcat tagctttagg gttaagcgaa attgtacagc agcaatcagg aggtatttca
     1981 ctagaatcaa tatttattga tgaaggattc ggtacattag atcaagaaac acttgaaaca
     2041 gcgttagaca ctttgttaaa tcttaaatca actggtagaa tggttgggat tatttcacat
     2101 gtgagcgaat tgaaaaatag aataccttta gttttagaag tgaaatcaga tcaatatcag
     2161 agttcaacaa gattcaaaag aaattaaaac ataaaaaata gagatggtac tttggaatgt
     2221 atagaacaac cttagcccat ctctttttat ttaaaaatta ttttttctca cgtaataaat
     2281 ctctgatttc agttaataac acaacatttt cttccacaac tgcttcttct tcggcttctt
     2341 ctttcttcat taatgtattt gcaatcttaa caaagatgaa taaagcaaac gcgatgataa
     2401 taaagtcgat aacagattgg ataaataaac cgtatttaat accccagaat gaccattctt
     2461 tagcaaaatc aactgatccg aaaattttac caattaatgg catgatgata ttttctacta
     2521 atgaagatat aatcttgttg aaagctgcac ccatcacaac agcaattgct aaatctaaga
     2581 cgttaccttt taaggcgaac tctttgaatt cttttaacat tacactcaac ctctcttttt
     2641 taaatgtaac ctcaattata caacaaataa aaaaattaga aaatagatta ttcaagaaaa
     2701 tttgattatc gcaaagacct ttgttatcct ataaaggtgc gtgagttatt gaataaaatg
     2761 tttagataat atttttattc tactacataa aattaaatat agaattgaag ggagtaatta
     2821 attatgaatt cttcttcacc agagaatcca aatggaaaga agtattcacc agtcttcatc
     2881 tatagtgcaa ttgttgttgc tatagtcgta ttacttggtg catttttacc tgaacaattc
     2941 aactatgtta ccaataatat taaaatgtgg attacagaaa agttaggttg gtattatctt
     3001 attcttacta cgattatcgt gttcttctgt atattcctta tttttagtcc tattggaaaa
     3061 cttaaactag gtaaaccaaa tgacaaacct gagtttaata caatttcatg gtttgctatg
     3121 ttgtttagtg ctggtatggg gataggtttg gtgttttatg gtgcagctga accgatggcg
     3181 cactttgcta cgccacctac agcagatccc aaaactactg aagcttatac tgaagctcta
     3241 cgttcaacat ttttccattg gggattccat gcttgggctg tttatggtgt tgttgcgtta
     3301 gcgttggcat attcgcaatt ccgtaaaggt gaaccaggtt tattatctag aactttacgt
     3361 cctcttttag gtgataaagt ggaaggacct attgggattt ttattgacgt tttatctgta
     3421 tttgcgacaa tcgttggggt agccgtttcg ttaggtatgg gtgctctaca aattaatggt
     3481 ggtttacatt acttgttcaa tgttccaaac aatacgtttg tacaagcgat tatcatcatt
     3541 gttgttacta tcttatttat agcaagtgca tggtctggat taagtaaagg tattcaatac
     3601 ttaagtaact tgaacattgg tttaggtact attttaatgg tagctgcttt aattgttgga
     3661 ccaactgttc ttattttaaa tatgttaact agctctacgg gtagtttact aaacacattc
     3721 ttgtttaata gttttgatac agctgcttta aatcctcaaa aacgtgaatg gatgtcttca
     3781 tggacacttt attactgggg ttggtggtta agttggagcc cattcgttgg agtgtttatt
     3841 gcacgagttt caaaaggacg ttcaattaga gagttcattt ctggtgtctt gctagttcca
     3901 gcaattgtta gttttgtatg gtttagtgtc tttggtgtat taggcatcga gacaggtaag
     3961 aaacacaaag aaatttttga tatgactcct gaaacacagc tatttggagt gtttaatcat
     4021 gtgccatttg gtattgtttt atcgttgatt gcattattat taattgcatc attctttatt
     4081 acatctgctg actcagcaac atttgtatta ggaatgcaaa caacatttgg ttcattaaat
     4141 ccatctagta tggtaaaagt tgtttgggga atttcacagg ccttaatagc atttgtactt
     4201 ttattagctg gtggcggtaa cggcgctgaa gctttaaatg cgattcaaag tgctgcaatt
     4261 attagtgcat tcccattctc ctttgtcgtc atactcatga tggtaagttt ctacaaggat
     4321 gcgaaccagg aacgtaaatt cctaggttta acattgactc cgaataaaca ccgcttacaa
     4381 gaatatatca agagtcaaca agaagattat gaatctgaca ttcttgaaaa gcgtcagtca
     4441 cgtagaaata tagagaaaaa agataactaa taaaatttag ttaagtattt taataacaag
     4501 tagtatgtca ttctagtagc tagaacagat atactacttg tttgtttttg tggaaaattg
     4561 agtatattca aaaggataag aacgagaatt tcgttattaa actacgaatt ctcgattttt
     4621 ttatatttta agataggttt atttctcaca acttaataga aaggggtttg acaaagctaa
     4681 agtgaggtac gacggtataa acaaaaatta actatacttt tatagaaaat taactcaggc
     4741 tg
//
LOCUS       DALMNS010000131         4549 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.131, whole genome shotgun sequence.
ACCESSION   DALMNS010000131 DALMNS010000000
VERSION     DALMNS010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4549
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.131"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..898)
                     /locus_tag="O6Y56_002422"
     CDS             complement(<1..898)
                     /locus_tag="O6Y56_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000416915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDB5575658.1"
                     /translation="MEKVNFKSNNLNVVANMYFPENFEKNRKYSAIVVNHPAGGVKEQ
                     TAGLYAEKLAELGYITMAYDASYQGESEGSPHNLEDPSSRVEDVRAAVDYFNTLNFVD
                     DERIGALGICAGGGYTIKATQTEKRIKAVVGISAADIGQNFRKGWNGDQNEEDINAVL
                     DQVAEQRKSEAQGAEQKLVGFVPDEPTNDMDQETKDGWEYYRTPRAQHERSINRFPFI
                     SFDRMIEFTAFDLVDKLLTQPVLFIAGSEAGTRWQSENAYERALDPKDIFIVEGANHF
                     DMYDKEPYVSQAVDKMKDFYNQY"
     gene            complement(911..1549)
                     /locus_tag="O6Y56_002423"
     CDS             complement(911..1549)
                     /locus_tag="O6Y56_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDB5575659.1"
                     /translation="MTRILIIGASGQISQEAIDLYLQNTDFDLTLLARNKAKLPKYDS
                     NRVTVIEGDATDKNAVANALGNVDTVFVSSTGETLGEQAKTIIEAMNDKGTQRLIFVT
                     ALNTLHEVPGKFGEWNDENIGPYLAPFREATKAIESSDLDYTIFRPAWLTNYDEINYE
                     VTQRDEPFKGTEVSRKSVADLAVKISQDPKLHSKENIGLNKPNTDGNKPQWL"
     gene            complement(1571..2485)
                     /locus_tag="O6Y56_002424"
     CDS             complement(1571..2485)
                     /locus_tag="O6Y56_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000814441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDB5575660.1"
                     /translation="MKQSVNFKSKTNLLAANLYTPEQFDESKKYPAITVCHPGGGVKE
                     QTAGMYAEKLAEFGYVTVVYDASHQGESEGPPRYLEDPFARTEDVRASVDYLTTLDFV
                     DNDRIGALGVCAGGGYTVSAARTERRIKTLATVSMVDIGALFRKGPGDVVSIDDQLAF
                     MTQVADQRTAEANGADYGITGYVPEEIDDSMPENSTMVQGHDYYLTERGQHKNAPNKL
                     LLRSFSEVLTFAPFTYIDELLTQPFLAIAGTEADTIEYSVNAVEKAAGNNNELYKIEG
                     ASHVDLYDIPEYINQVLPKLESFYKETL"
     gene            2664..3218
                     /locus_tag="O6Y56_002425"
     CDS             2664..3218
                     /locus_tag="O6Y56_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001100492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /protein_id="HDB5575661.1"
                     /translation="MNVGDLRVVKTRASIKKAFMTLLFEKDFDTISIKEITEFAQIGR
                     KTFYLHYIDKYDLLDQIVSEKLIELEQIGKMKNRLGVQEGTQLWFEFFEDNRAFFMRL
                     FNISSASNYKKKLLHFIEEEFKKKIPTEVATNKGLDYHLYINFISSGIIGLLDIYLNR
                     SDDIQEQDKIILQVSRLLSLYDLT"
     gene            3288..4406
                     /locus_tag="O6Y56_002426"
     CDS             3288..4406
                     /locus_tag="O6Y56_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001142365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HDB5575662.1"
                     /translation="MPTITQNRHLEIKRAGFHELFFDLIFVYAIQKIAHVILHAHHGT
                     ISFELFFKYVMMSLILWILWAHQTFFTNRFGDAVTKDVIFMMISMFILIFLSNSLYPD
                     FEKTFKPFFFCVGLMYLSIGLQYLLHTSRKLSYADKRTCQSFAIVALTVSVLSFLALL
                     LPSSIHYIPAFLGVFIAGTGLIPFRKYLEQSPVNMMHLVERFSLLTIIIFGELIVGLA
                     SIFSITDFSYIYIFQFLILVCMFGTYWIITENYINHKQRSIGFRLVYTHLLINIALGT
                     LNAALVFSDNAELHAYFEINLMYLSILAFFIGIWLNAPYFHEKFSYVKHIIYALVILL
                     ISYLVSIIFIANKHVMIISIAIAVAIIMLMYYKNNKHT"
BASE COUNT         1392 a          793 c          685 g         1679 t
ORIGIN      
        1 aatattgatt ataaaaatct ttcattttat ctactgcttg tgatacataa ggttctttat
       61 catacatatc aaaatgattt gcaccttcca cgataaatat atcttttgga tctaaagcac
      121 gttcataggc attctcactt tgccaacgtg tacctgcttc actacctgca ataaatagta
      181 cgggttgtgt cagtaactta tctactaagt caaatgccgt aaattcaatc atacggtcaa
      241 aacttatgaa tgggaatcgg ttaatagaac gttcgtgttg cgctcttggt gtacgataat
      301 attcccaacc gtctttcgtt tcttgatcca tatcattcgt aggttcatct ggtacaaatc
      361 ctacaagttt ttgttctgca ccctgtgctt cggattttct ttgttcagca acttggtcta
      421 agacagcatt aatatcttct tcattttggt ctccattcca acctttgcgg aaattttggc
      481 caatatctgc tgcgctaata ccaacaacag ctttaattct tttctctgtt tgagttgctt
      541 taattgtata accaccgcct gcacaaatac ctaaagcacc aatacgctca tcatctacaa
      601 agtttaaagt attgaaataa tcaactgctg cgcgaacatc ttcaacgcgt gaggatggat
      661 cttctagatt gtgcggcgac ccttcacttt caccttgata acttgcatca tatgccatag
      721 ttatatagcc taattcagct aatttttctg catataaccc tgctgtttgt tctttaacgc
      781 cacctgctgg atgatttaca acgattgctg agtatttacg atttttctca aagttttcag
      841 ggaaatacat atttgctact acatttaagt tattactttt aaaattcact ttttccatta
      901 ttctctctcc ttataaccat tgtggtttat taccgtctgt attaggtttg tttaatccaa
      961 tattttcttt tgagtgaagt ttaggatctt gagagatttt aactgctaaa tctgccacac
     1021 ttttacgaga cacttcagtc cctttaaagg gttcatctct ttgtgtaact tcataattaa
     1081 tctcgtcata gttcgttaac caagccggtc tgaatattgt gtagtctaaa tcggaacttt
     1141 caattgcttt agtggcttct ctaaacggtg cgagataagg accgatattt tcatcattcc
     1201 attcaccgaa tttacctggt acttcatgta gtgtattaag tgctgtgaca aatattaaac
     1261 gttgcgtacc tttatcattc attgcttcga taattgtctt agcttgctcg cctaatgttt
     1321 ctccggtaga actaacaaac acagtatcta cattacctaa agcattagca acggcgtttt
     1381 tatctgtcgc atcaccttca atgactgtca ctctgtttga atcatattta ggtaattttg
     1441 ctttatttct cgctaatagc gttaaatcaa aatctgtatt ttgtaaatat aagtcaatgg
     1501 cctcttgtga aatttgacca cttgcaccaa tgattaaaat acgagtcatt taaataccac
     1561 ctttttcctt ttatagtgtt tctttataga atgattcaag ttttggtaat acttgattaa
     1621 tatattctgg gatatcatat aaatccacgt gtgatgcgcc ttcaatttta tataattcgt
     1681 tgttattgcc tgctgctttt tcaacagcat taacgctata ttcaatcgtg tctgcttctg
     1741 tacctgcgat tgctaagaat ggttgtgtca acaattcatc aatatatgtg aaaggcgcaa
     1801 atgttaatac ttctgaaaaa cttcttaata atagtttgtt tggtgcgttt ttatgttgac
     1861 cacgttcagt taaataataa tcatgccctt gtaccattgt tgaattttca ggcatagaat
     1921 catcaatttc ttcaggtaca tagccagtaa tgccataatc tgcgccattt gcttcagctg
     1981 tacgttgatc tgcaacttgt gtcataaatg ccaattggtc atcaattgat actacatcgc
     2041 caggaccttt acggaataaa gcaccaatat ctaccatact tacagtagct aatgttttaa
     2101 tacgacgttc tgttcttgct gcacttactg tatatccacc accggcacaa acgccaagcg
     2161 caccaattct gtcattatcc acaaagtcta atgttgtaag ataatcaact gaagctctaa
     2221 cgtcttctgt tctcgcaaat ggatcttcta aatatctagg aggaccttca ctttcacctt
     2281 gatgtgatgc atcatataca accgtaacgt agccgaattc cgcaagtttc tctgcataca
     2341 tacctgcagt ttgttcttta acaccgccac ctgggtgaca aactgtaatt gctggatatt
     2401 ttttgctttc atcaaattgt tctggtgtat ataaattcgc tgctaataaa tttgttttac
     2461 ttttaaaatt aactgattgt ttcatagatt aaatgcctcc atctttttat ataagtcatt
     2521 catttgttgt agatatttat tactcttgtg tgtataatgc catactagag tatttaaatg
     2581 tacaattcaa ttaacaagga agcacatatg tgttttaata cacagtttta taaaaatggg
     2641 ttttaaaagg aaggagtatt attatgaatg ttggggattt acgtgttgtt aaaacgagag
     2701 ctagtattaa aaaggcattt atgaccttac tttttgaaaa agattttgat actatttcga
     2761 ttaaagaaat tactgaattt gcgcaaattg ggagaaaaac attttatcta cattatattg
     2821 ataaatatga tttactagat caaatagtat cggaaaaatt gatagaactt gagcaaattg
     2881 gtaaaatgaa aaatcgtctg ggtgtacaag aaggtacaca attatggttt gaattttttg
     2941 aagacaatag agcttttttc atgagacttt tcaatattag tagtgcttca aattataaga
     3001 aaaaattgct ccattttatt gaagaagaat ttaaaaagaa aataccgaca gaagtcgcta
     3061 cgaataaagg attagattat catttgtata tcaactttat tagtagtggt attatcggtt
     3121 tactcgatat ctatctaaat cgcagtgatg acatacaaga acaagacaaa ataatcttac
     3181 aagtatcacg attactatct ttgtatgatt taacatagat taaaattgat ccaacctata
     3241 aaattatagg ttggacgatt ttttgtttaa ttcatcaagc tttaaaaatg ccaacaataa
     3301 ctcaaaatcg acacttagaa attaaaagag ctggctttca cgaactattt ttcgatttaa
     3361 tatttgtata tgcaattcaa aaaattgcgc atgttatact tcatgcccat catggtacga
     3421 tatcttttga attattcttc aaatatgtca tgatgagttt aattttatgg atactgtggg
     3481 cccatcaaac ctttttcact aaccgttttg gtgatgcagt aacaaaagac gtcattttta
     3541 tgatgattag tatgtttata ttgattttcc tttcgaacag tctttatcct gattttgaaa
     3601 aaacatttaa accattcttc ttttgtgttg gactaatgta tttaagtatt ggattacagt
     3661 atcttttaca cacgagtcga aaattaagtt acgcagacaa acgaacatgt cagtctttcg
     3721 ctattgtagc attaactgta tctgtattat catttctagc attactatta ccatctagca
     3781 tccattatat tccagcattc ttaggtgtat ttattgcagg tactggctta attcctttca
     3841 ggaaatattt agaacaatca ccagttaata tgatgcattt ggtcgaacgt ttttctttac
     3901 taacaattat tatttttggc gagctaatcg taggtcttgc ttcaatattt agtattactg
     3961 attttagcta tatttatatt ttccaatttt taattttagt atgtatgttt gggacatatt
     4021 ggataatcac tgaaaattat attaatcata aacaacgatc cataggtttt cgtttagtat
     4081 acacacatct cttaattaac atcgcattag gtacacttaa tgcagcttta gtttttagtg
     4141 ataatgctga attacatgca tattttgaaa ttaatttaat gtacttaagc attttagcct
     4201 tttttattgg tatttggcta aatgcacctt atttccatga aaaattcagt tatgttaaac
     4261 atattattta tgcattagtg atattactta tttcttatct cgtaagtatt atctttatcg
     4321 cgaacaaaca tgtcatgatt atttcgatag ccattgcagt tgcgataatt atgttgatgt
     4381 attataagaa taataaacac acttaaaaga ataactataa aatttatata cacaaaaact
     4441 tcctcacctt ttgatttatc taaagaagat atgcatccac atcaaatatc tatgatggat
     4501 tctaaattac aagactctat attctagaaa gaactagaca taaaacaag
//
LOCUS       DALMNS010000132         4327 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.132, whole genome shotgun sequence.
ACCESSION   DALMNS010000132 DALMNS010000000
VERSION     DALMNS010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4327
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.132"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            2..910
                     /locus_tag="O6Y56_002427"
     CDS             2..910
                     /locus_tag="O6Y56_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002955256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1672 domain-containing protein"
                     /protein_id="HDB5575663.1"
                     /translation="MKKFIGSVLATTLILGGCSTMENESSKDTNTETKSVPEEMEASK
                     YVGQGFQPPAEKDAIEFAKKHRKEFEKVGEQFFKDNFGLKVKATNVVGKDDGVEVYVH
                     CEDHGIVFNASLPLYKDAIHQKGSMRSNDNGDDMSMMVGTVLSGFEYRAQKEKYDNLY
                     KFFKENEKKYQYTGFTKEAINKTQNVGYQNEYFYITYLSRNLKEYRKYYEPLIHKNDK
                     EFKEGMQQARKELNYTANTDAVSTLFSTKKNFTKDNTVDDVIELSNKLKEKPNMPQKS
                     QVTIQLGKSSINTKKPFYDDINPIEG"
     gene            922..3083
                     /locus_tag="O6Y56_002428"
                     /pseudo
     CDS             922..3083
                     /locus_tag="O6Y56_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033760.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3174..4079
                     /locus_tag="O6Y56_002429"
     CDS             3174..4079
                     /locus_tag="O6Y56_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020807974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1672 domain-containing protein"
                     /protein_id="HDB5575664.1"
                     /translation="MFKRTKLILIATTLLSGCSTTNNEFNNETKSVPEEMEASKYVGQ
                     GFQPPAEKDAIEFAKNHKDKIAKRGEQFFMDNFGLKVKATNVVGSGDGVEVFVHCDDH
                     DIVFNASIPFDKSIIDSNSSLRSEDKGDDMSTLVGTVLSGFEYRAQKEKYDKLYNFFK
                     DNEEKYQYTGFTKEAINKTQNSGYENKYFYIVANIPTLREYRKYYEPLIKKNNLNFKK
                     GMKEARKGVGYKAEIEVHTTLFSKSSNFSKDKKLDDVIDLSESTKKLHLNFENTKIFL
                     QLAKSTISTNRVNYSDNESIRIEVE"
     gene            4137..>4327
                     /locus_tag="O6Y56_002430"
     CDS             4137..>4327
                     /locus_tag="O6Y56_002430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1672 family protein"
                     /protein_id="HDB5575665.1"
                     /translation="MFKRTKLILIATLLLSGCSTIENETKEDTNTETKSVPEEMEASK
                     YVGQGFQPPAEKDAIEFAK"
BASE COUNT         1807 a          533 c          769 g         1218 t
ORIGIN      
        1 tatgaaaaaa ttcattggat cagttttagc tacgacatta attttagggg gatgttccac
       61 gatggaaaat gaatcaagta aagacacgaa tacagaaaca aaatcagtac cagaagaaat
      121 ggaagcttca aaatatgtag gacaaggctt ccaaccgcct gcagaaaaag atgcgattga
      181 atttgcgaag aaacatcgta aagaatttga aaaagtaggt gaacaattct ttaaagataa
      241 ctttggacta aaagttaaag ctacaaatgt tgtaggtaaa gatgatggtg tagaagttta
      301 tgtgcattgc gaagatcatg gcattgtatt taatgcaagt ctacctttgt acaaagatgc
      361 catccatcaa aaaggatcaa tgcgtagtaa tgacaacggt gatgatatga gtatgatggt
      421 gggtacagtg ctgagtggct ttgaatatcg agcgcaaaaa gaaaagtatg ataacttata
      481 taaatttttc aaagaaaatg aaaagaaata tcaatataca ggttttacta aagaagcaat
      541 taacaagacg caaaacgtcg ggtatcaaaa tgaatatttt tatatcacat atttatcaag
      601 aaatttaaaa gaatatcgta aatattatga accattgatt cataaaaatg ataaagaatt
      661 taaagagggt atgcaacaag ccagaaaaga gctaaattat actgccaata ctgatgcagt
      721 ttctacactt ttttcaacta agaaaaactt tactaaagac aatacagtag atgatgtgat
      781 tgaattgagt aataaattaa aagaaaaacc caatatgcct caaaaatctc aagttactat
      841 tcaattagga aaatctagta taaatactaa aaaaccattt tatgacgata taaatccaat
      901 tgaagggtaa gtgaatataa agtgaataaa ataaatgata gggacatagc agaattgagc
      961 agttattggg tttatcaaga tataaatgaa aaaaagattt taaagtaaat ggaaaacggt
     1021 tcaaacaaat agataattat aatgataata gtaatgataa tatgaatggt gctgctgata
     1081 ttaaaacata cgagttactt aatgatcagg ggaatccaac tggtcaacag acaataattt
     1141 atcaaggaac atctaatgag gcaattaacc caaataatcc attgaaatca tcgggttttg
     1201 gagatgattg gctccaaaat gctaaattaa tgaataatga taatgaaagc acagattatt
     1261 taaagcaagt agaagaattc gcaaatagtt atcgacaaaa aattaaagat gcttcggttc
     1321 ttgatgaaaa tgaatttaga agaaaataca aaactatacc ttataattac aaaaacaaaa
     1381 caattgtggc gaatggtggt aattcagaag gcggtgcagg agcaaaatat caaggagcga
     1441 aacatccgaa tgaaaaagtt gttgctactg attcagcaat gattccttat gctgcttggc
     1501 agaaatttgc tagaccacgc tttgataata tgattagttt taatagtacc aacgatttat
     1561 taacatggtt acaagatcct ttcatcaaag atatgccggg aaaacgcgtt aacattaatg
     1621 atggtgtacc taggttagat gctttaatag acagccatgt aggttataaa aggaagttaa
     1681 atagaaagaa taacacatac gataccgtac cattaatcaa aataaagtcg gtaaaagata
     1741 cagaaattaa aaatggaaaa aaggtaaaaa agattattaa cataacatta gatatggatg
     1801 ggcgaattcc aataaatgtt tggaccggag attcgattgc acgttccgga aaaggaactt
     1861 taattaaact taatttagaa aatcttgatg cgttgagtaa actgattact ggtgaaacta
     1921 gtggtatgct agcagaatgc gtaatctttt taaatgaaag ttttaacatc tcagaaaatg
     1981 aaaataaaaa ttttgcagat agaaagcaac aattatcaga aggatttaag gataagatta
     2041 acttatttca attagaagaa atggaaagaa ctttaattag taaaataaac tcacttgaag
     2101 aagttgcaga tgaaacaata gaaagtatta gtgctgttaa acacttatta cctgattttg
     2161 cattggatgc attaaaagaa agaattaatg aattgtttaa tggaataaaa tcatttatag
     2221 aaaaagtata tgatagtata gatagtaaaa ttaaagaaat tttcaaaaat attgatcatg
     2281 acttcaagga tggagtatct gaggaaatga tgaaacattt aaaagtagta aaacagaata
     2341 ttcagcaaat aaaaaatcaa aatgatattt atggtaggca aattgcagat attagaagta
     2401 ttatgaagca acaagatgca acaattttag atggaaatta tcaaattaat tatagcggtg
     2461 aaaatatggt gcagggtcta gctttacctt ctaattattt aggaagaaaa atgaaaatat
     2521 taaaagacca tatcgatgat ggtattaaaa aattggcaga ttatgttcaa ggtatatatg
     2581 atgaatatgc agcaaaaatt gtcgatttaa taaaatattt gattaataca atacccaaaa
     2641 tacgtaagaa tttaagacat gcaattgaaa tattaaatgt aaaaaagaaa gaatttttgt
     2701 ccataattcc taaagcgact tgtaattata ttaaaactaa attagaagaa ttagataata
     2761 atttaggcaa atgggagcca tttcttaatg atttaaaagc agtgtcacca attttagata
     2821 accatttaga tgatattgtt aagaacatga agcctttgat tgtacaaatg ttatttgaac
     2881 catctcatta tgatgacatg tttattttaa acgcacaagc ccatgcacgt cttgatcaaa
     2941 tggcacaaca gtttgaagtt gtttgtaatg gcttgaatga aaatgaagga caagcaattc
     3001 aaacgatgga tcaatctgcc tctctaattc gctcaaactt aattaaagtt aaagaacagt
     3061 tagaaaaact agcagtatac taattaattt attaaatgct acttgttttc attgagaata
     3121 agtagctttt tcaaaaataa aatttttata aacacataaa tgggtgatga gctatgttta
     3181 aaagaactaa actaatctta atagcaacga cactactatc aggatgttca actaccaata
     3241 acgaattcaa caatgaaaca aaatcagtac cagaagaaat ggaagcttcc aaatatgtag
     3301 gacaaggctt ccaaccacct gcagaaaaag atgcgattga atttgcgaaa aatcataaag
     3361 ataaaattgc taaacgtggc gaacaatttt ttatggataa cttcggtcta aaagttaaag
     3421 ctaccaatgt tgtaggtagt ggtgacggcg tagaagtatt cgtgcattgt gatgaccacg
     3481 acatcgtatt taatgcgagt attccatttg acaaatcaat tattgacagt aatagctcat
     3541 taagaagtga ggataaaggc gatgatatga gtactttagt aggtacagtg ttgagtggct
     3601 ttgaatatcg agcacaaaaa gaaaagtatg ataaattata taattttttc aaagataatg
     3661 aagagaaata ccaatataca ggatttacta aagaggcaat taacaaaaca caaaatagtg
     3721 gatatgaaaa taaatatttt tatatagttg ctaatatacc gacgctccga gaatatagga
     3781 aatattacga acccctaata aagaaaaata atctgaattt taaaaaaggt atgaaagaag
     3841 caaggaaagg agtaggctat aaagctgaaa tagaagtaca tactacattg ttttcgaaaa
     3901 gtagtaactt ttcaaaggac aaaaaattag atgatgttat agatttgtct gaaagtacga
     3961 aaaagttaca ccttaatttt gaaaatacga aaatattttt acaactagca aaatctacta
     4021 ttagtactaa tcgagttaat tacagtgata atgagtctat aaggattgag gtcgaatgac
     4081 ttgaaatcag ctaatttctc tatattctaa acaaacacat aaatgggtga tgagctatgt
     4141 ttaaaagaac taaactaatc ttaatagcaa cacttctgct atcaggatgt tccacgattg
     4201 aaaatgaaac aaaagaagac acgaacacag aaacgaaatc tgtaccagaa gaaatggaag
     4261 cttcaaaata tgtaggacaa ggcttccaac cacctgcaga aaaagatgcg attgaatttg
     4321 cgaagaa
//
LOCUS       DALMNS010000133         4281 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.133, whole genome shotgun sequence.
ACCESSION   DALMNS010000133 DALMNS010000000
VERSION     DALMNS010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4281)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4281)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4281
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.133"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(40..588)
                     /gene="hxlB"
                     /locus_tag="O6Y56_002431"
     CDS             complement(40..588)
                     /gene="hxlB"
                     /locus_tag="O6Y56_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499126.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-3-hexuloisomerase"
                     /protein_id="HDB5575666.1"
                     /translation="MAKFSDYQLILDELKMTLSHVEADEFSTFASKILHAEHIFVAGK
                     GRSGFVANSFAMRLNQLGKQAHVVGESTTPAINSNDVFVIISGSGSTEHLRLLADKAK
                     SVGADIVLITTNKDSAIGNLAGTNIVLPAGTKYDEQGSAQPLGSLFEQASQLFLDSVV
                     MGLMTEMNVSEQTMQQNHANLE"
     gene            complement(590..1222)
                     /gene="hxlA"
                     /locus_tag="O6Y56_002432"
     CDS             complement(590..1222)
                     /gene="hxlA"
                     /locus_tag="O6Y56_002432"
                     /EC_number="4.1.2.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hexulose-6-phosphate synthase"
                     /protein_id="HDB5575667.1"
                     /translation="MELQLAIDLLNKEDAAELANKVKDYVDIVEIGTPIIYNEGLPAV
                     KHMADNISNVKVLADMKIMDAADYEVSQAIKFGADVITILGVAEDASIKAAIEEAHKN
                     NKQLLVDMIAVQDLEKRAKELDEMGADYIAVHTGYDLQAEGQSPLESLRTVKSVIKNS
                     KVAVAGGIKPDTIKEIVAESPDLVIVGGGIANADDPVEAAKQCRAAIEGK"
     gene            complement(1299..2057)
                     /gene="nagB"
                     /locus_tag="O6Y56_002433"
     CDS             complement(1299..2057)
                     /gene="nagB"
                     /locus_tag="O6Y56_002433"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HDB5575668.1"
                     /translation="MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLY
                     EQLVKLLNKNQLNVDNVSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHI
                     PNGDADDMNAEASTYNDLLEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTE
                     STIKANSRYFENEDDVPKQAISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVD
                     VPATLLHKHPNVEIYLDDEACPKNVAKIHVDEMD"
     gene            2333..2695
                     /locus_tag="O6Y56_002434"
     CDS             2333..2695
                     /locus_tag="O6Y56_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YojF family protein"
                     /protein_id="HDB5575669.1"
                     /translation="MLEPIKEQEVIDLLASFEHKPVYLHVETTNGAYANHFDQRVFNA
                     GTFLRNIQVTYTHAQLKGGNKEPYRIGLKLSNGGWVYVQGLTHFEINEHDEFLIAGFN
                     YEGQLAAALQISERPFNL"
     gene            2709..3374
                     /gene="bshB2"
                     /locus_tag="O6Y56_002435"
     CDS             2709..3374
                     /gene="bshB2"
                     /locus_tag="O6Y56_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis deacetylase BshB2"
                     /protein_id="HDB5575670.1"
                     /translation="MTDERHVLVIFPHPDDETFSSAGTLASYIQKGIPVTYACLTLGQ
                     MGRNLGNPPFATRESLPSIRERELEEACKVIGITDLRKMGLRDKTVEFEPYEHIDGMI
                     KSLIDDTNPSLIISFYPGYAVHPDHEATADAVIRTVERMPKEERPRLTLVAFSNDATE
                     ALGEPDVQNDITDFKELKIKAFEAHASQTGPFLKQLASPEIDGKQHSFLTVEPYWTYH
                     FKS"
     gene            3387..4265
                     /locus_tag="O6Y56_002436"
     CDS             3387..4265
                     /locus_tag="O6Y56_002436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002445753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE2"
                     /protein_id="HDB5575671.1"
                     /translation="MTEFDLSTREGRWKHFGSVDPIEGTKPTTKNEMTDLQSTHKDFL
                     FEIEEVGIKNLVYPVLVDQYQTAGTFSFSTSLTKDEKGINMSRIIESVEKHYDNGIEL
                     EFNTLYQVLRTLQTNMKQSAAGVDVSGKWFFDRYSPTTNIKAVGNADVTYGLAIDGDK
                     VTRKELTIEATVTTLCPCSKEISEYSAHNQRGVVTVKTYINKDQDIVDDYKNKILDAM
                     EANASSILYPILKRPDEKRVTERAYENPRFVEDLIRLIAADLVEFDWLDGFDIECRNE
                     ESIHQHDAFAKLKYRK"
BASE COUNT         1387 a          776 c          696 g         1422 t
ORIGIN      
        1 atttctgcct aggcatcata ttatcgacta tctttgtttt tattctaaat tagcatgatt
       61 ttgttgcatc gtttgttctg aaacattcat ttcagtcatc aatcccatta caacactatc
      121 taaaaataat tgtgatgctt gttcaaacaa acttcctaat ggttgtgccg aaccttgttc
      181 atcatatttt gtacctgcag gcaaaacgat gttcgtccca gctagattgc ctattgcaga
      241 atctttattt gtagtaatta atacgatgtc agcacctact gattttgctt tgtctgctaa
      301 taatcttaaa tgttccgtgg aacctgaacc agagataatt acaaatacat cattcgagtt
      361 aatcgcaggt gtcgttgatt ctccaacaac atgtgcctgt ttgccgagct gatttaagcg
      421 cattgcaaaa ctattcgcca cgaatcctga acgtcctttg ccagctacaa atatatgttc
      481 agcatgtagt attttggacg caaacgttga aaactcatcc gcttcaacat gtgacaaagt
      541 catctttaat tcatctagaa ttaattgata gtcactaaat ttagccatat tacttacctt
      601 cgattgcagc gcgacattgt tttgcagctt ctactggatc atctgcattt gcgattccgc
      661 ctccaacaat aacaaggtca ggactttcag cgacaatttc tttaattgta tctggtttaa
      721 ttccacctgc tactgcaact ttagaatttt taataacaga tttaacggtt cttaaacttt
      781 ctaatggtga ttgcccttct gcttgtaaat cataaccagt gtgtactgca atataatcag
      841 cacccatttc atctagttct tttgcacgtt tttctaaatc ttgaacagca atcatatcaa
      901 ctagtaattg tttattattt ttatgagctt cttcaatagc tgctttaatt gatgcatctt
      961 ctgcaacacc tagtattgta attacatccg cgccaaattt aattgcttgg ctaacttcat
     1021 aatcagctgc atccataatt ttcatgtctg ctaatacttt tacattacta atgttgtctg
     1081 ccatatgttt aactgctggt aaaccttcgt tgtaaatgat tggcgtaccg atttctacga
     1141 tatctacata atcttttact ttatttgcta actcagccgc gtcttctttg tttaataaat
     1201 caattgctaa ttgtaattcc actaaaaatc atccttccaa tgctttttat ctttctattg
     1261 gaacctttcc cgaggcattt cttaattaaa cattgcaatc aatccatttc atcgacatga
     1321 attttcgcaa catttttcgg gcaagcttcg tcgtctaaat atatctcaac attcgggtgt
     1381 ttgtgaagta atgtggctgg aacatcaaca gaaatttcct gatttaataa atgtgtaata
     1441 gcagcacgtt tcttttcacc aaatgcgagt aaaatgatac gtttagcttg aagaatatta
     1501 gcaagtccca tcgaaatggc ttgctttgga acatcatctt cgttttcaaa atatcgacta
     1561 ttagccttaa tagtactttc agtcaaatca acgatatgag taacgctatc aaacggcgta
     1621 ccaggttcat taaatccaat atgaccattt tctccaatac ctaaaatttg aatatcacgt
     1681 tgaccttgtt gttctaaaag gtcattatat gttgacgctt ccgcattcat atcatcggca
     1741 tctccattcg gaatatgaat attctttcta ttaaaataag gatattgttt gaaaagcatg
     1801 tcatccatat aatagtgata actttgcgga tgtgatgcgg ttaaacctac atattcgtct
     1861 aaattaaacg tggatacatt gtctacgttt aactgatttt tatttaataa cttaacaagt
     1921 tgttcataca aatctgtcat tgtaccgcca gttgctaaac ctagtttaca gtgctgatta
     1981 aatgccatct ctttatataa ctcacatgca acatagaatg atgcttgttt tttcgatcct
     2041 aagtttaata ctttcattgt ttacatgcct ccacaaattt aatacatttt aaaaacttat
     2101 gaattcattc atacaccatt aatatagcat tatttttaat gtttaacact tttcaaattc
     2161 caacaaattt ttgattttta aaagtaaaaa actaatgctg tatgattgcg taatcctgag
     2221 taattaccct tcatgaaaat taatttataa ataattgagc aatcgtatac aattattgaa
     2281 tagtttttag taaaatagaa agataaacac attgatagtg taaggagtga acgtgttgga
     2341 accaattaaa gaacaagaag ttatagattt acttgcttct tttgaacata aacctgtgta
     2401 tctgcatgtt gaaacgacaa atggggccta tgcgaaccat ttcgatcaac gtgtttttaa
     2461 tgctggtaca tttttaagaa acatacaagt aacatatacg catgcacaac taaaaggtgg
     2521 taataaagaa ccttatcgca ttggtcttaa actatcaaat ggtggttggg tttatgtaca
     2581 aggtctaacg cattttgaga tcaatgagca tgatgaattt ttaattgcag gttttaatta
     2641 cgaaggtcaa ctcgctgcag cacttcaaat tagtgagcga ccatttaatt tatagaggag
     2701 gcatcaacat gactgacgaa agacatgtat tagtaatatt tccacatcct gatgatgaaa
     2761 ccttctcatc tgcaggcaca ttagcaagtt atatccaaaa aggcatacct gtaacatacg
     2821 catgtttaac cctaggacaa atgggcagaa atttaggtaa tcccccattt gcaacacgcg
     2881 aatcattacc aagtattcgt gagcgtgaac tagaagaagc ttgtaaagtt attggtatta
     2941 ctgatttaag aaaaatgggt ttacgtgaca aaactgtcga attcgaaccc tatgaacata
     3001 tagatggtat gattaaatct ttaatcgatg atacaaatcc atcattgatt atttcatttt
     3061 atcctggata tgcagtacat cctgatcacg aagcaacagc agacgctgta attcgaacgg
     3121 ttgaacgcat gcctaaagaa gaacgccctc gtttaacttt agttgcgttc agtaatgatg
     3181 caaccgaagc tcttggagag cctgatgttc aaaatgatat tacagatttt aaagaactta
     3241 aaattaaggc atttgaagca catgcttctc aaacaggtcc atttttaaaa caattagcaa
     3301 gtcctgaaat cgatggtaaa caacacagct ttttaacagt cgaaccatat tggacatatc
     3361 actttaaatc ttaacggagg aaaaaaatga ctgaatttga tttatcgaca cgagaaggtc
     3421 gttggaaaca ctttggttcc gtagatccta ttgaaggcac gaaacctact actaagaacg
     3481 aaatgacaga tttacaaagt acacataaag atttcttatt tgaaatagaa gaagttggta
     3541 ttaaaaactt agtgtaccct gtacttgttg accagtatca aacagctggc acatttagtt
     3601 tttcaacaag tttaacaaaa gacgaaaaag gtattaatat gagtcgtatt attgaaagtg
     3661 ttgaaaagca ctatgataat ggtattgaac ttgaatttaa tacactttat caggtgttac
     3721 gcactttaca aacgaatatg aaacaaagtg cggcaggcgt tgatgtttct gggaaatggt
     3781 tctttgatcg ctatagtcca accacaaata ttaaagcagt tggtaatgcc gatgtcactt
     3841 atggattagc aattgacggt gataaagtta cacgtaaaga acttactatt gaagcaaccg
     3901 tcacaacact atgcccttgt tcaaaagaaa taagtgaata ttcagcgcac aaccaacgtg
     3961 gtgttgtcac tgttaaaaca tatattaata aagatcaaga catagttgat gactataaaa
     4021 acaaaatttt agatgcaatg gaagctaatg caagttcaat tctataccct attttaaaac
     4081 gtcctgatga aaaacgtgtg acagagcgtg catatgaaaa tccacgtttt gtcgaagact
     4141 taattcgttt aattgccgca gacttagttg aatttgattg gttagacggt ttcgatatcg
     4201 aatgtcgcaa tgaagagtct atccatcaac atgatgcttt cgctaaatta aagtatcgta
     4261 aataatatca tatgattaat t
//
LOCUS       DALMNS010000134         4250 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.134, whole genome shotgun sequence.
ACCESSION   DALMNS010000134 DALMNS010000000
VERSION     DALMNS010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 4250)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4250)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4250
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.134"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(338..1561)
                     /locus_tag="O6Y56_002437"
     CDS             complement(338..1561)
                     /locus_tag="O6Y56_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArgE/DapE family deacylase"
                     /protein_id="HDB5575672.1"
                     /translation="MTTFSEKEKIQLLADIVELQTENNNEIDVCNYLKDLFDKYDIKS
                     EILKVNEHRANIVAEIGNGSPILALSGHMDVVDAGNQDNWTYPPFQLTEKNGKLYGRG
                     TTDMKGGLMALVITLIELKEQNQLPQGTIRLLATAGEEKEQEGAKLLADKGYLEDVDG
                     LIIAEPTGSGIYYAHKGSMSCKVTATGKAVHSSVPFIGDNAIDTLLEFYNQFKEKYSE
                     LKKHDTKHELDVAPMFKSLIGKEISEEDANYASGLTAVCSIINGGKQFNSVPDEASLE
                     FNVRPVPEYDNDFIESFFQNIINNVDSNKLSLDIPSNHRPVTSDKNNKLITTIKDVAS
                     SYVDKDDIFVSALVGATDASSFLGDNKDNVDLAIFGPGNPLMAHQIDEYIEKDMYLKY
                     IDIFKEASIQYLKEK"
     gene            1997..3052
                     /gene="lukH"
                     /locus_tag="O6Y56_002438"
     CDS             1997..3052
                     /gene="lukH"
                     /locus_tag="O6Y56_002438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component leukocidin LukGH subunit H"
                     /protein_id="HDB5575673.1"
                     /translation="MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVD
                     KSQQKDKRNVTNKDKNSPVPDDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYD
                     KNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNK
                     ISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHW
                     SVIANDLKYGGEVKNRNDELLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLT
                     YLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKDGQRLIVTYEVDWKNKT
                     VKVVDKYSDDNKPYKEG"
     gene            3074..4090
                     /gene="lukG"
                     /locus_tag="O6Y56_002439"
     CDS             3074..4090
                     /gene="lukG"
                     /locus_tag="O6Y56_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component leukocidin LukGH subunit G"
                     /protein_id="HDB5575674.1"
                     /translation="MIKQLYKNITICSLAISTVLTVFPATSYAKINSEIKAVSEKNLD
                     GDTKMYTRTATTSDSQKNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGY
                     WNSTLRWPGSYSVSIQNVDDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGG
                     LTGNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTND
                     SDNRTKSEIFSLTRNGNLWAKDNFTPKDKMPVTVSEGFNPEFLAVMSHDKKDEGKSKF
                     VVHYKRSMDEFKIDWNRHGFWGYWSGENHVDKKEEKLSALYEVDWKTHDVKFVKVLND
                     NEKK"
BASE COUNT         1590 a          618 c          678 g         1364 t
ORIGIN      
        1 gccccaacat agagaatttc gaaaagaaat tcaacagaca atgtaagttg gggtggggcc
       61 ccaacataga gaatttcgaa aagaaattct acaaacaatg taagttgggg tggggcctca
      121 acaaagagga attggattcc caatttcaac agtcaatgca atttatgtac gacaaatcac
      181 cactataatt tcagttttac atcacttaat caatgaaaat gtgattgttg atatttgaat
      241 atttacattc aaacaatatt catcgctatt tctatcaact taaaattcgc aataaaaaac
      301 tgccagcacg cgaatagggc agctgacagc atcgttctta tttttctttt aaatattgaa
      361 tggaagcctc tttaaaaata tcaatatatt tcagatacat atctttttcg atatattcat
      421 cgatttgatg tgccattaat ggattacctg gtccaaaaat ggctaaatca acattgtcct
      481 tattatcacc taagaaacta gaggcatctg ttgcacctac aagcgccgaa acaaatatat
      541 cgtctttgtc tacataacta gaagctacat ctttaatcgt agtaattaat ttgttatttt
      601 tatcgcttgt tacaggtcgg tgattgcttg gaatatcgag tgaaagctta ttgctatcca
      661 cattattaat gatattttgg aaaaacgatt ctataaagtc gttatcatac tcaggaactg
      721 gtcttacgtt aaattcaagt gaagcttcat ctggtacaga gttaaattgt ttgccgccat
      781 ttataatcga acatacagct gtaagaccag atgcataatt tgcatcctct tcagaaattt
      841 cttttcctat caatgatttg aacatgggtg caacatctaa ttcatgttta gtatcatgtt
      901 ttttaagctc tgaatatttt tctttaaatt gattataaaa ttcaagcagt gtatcaattg
      961 cattgtcacc aataaatgga actgagctat ggacagcttt accagtggca gttactttac
     1021 atgacataga tcctttatgt gcataataaa ttccagatcc agttggttca gcaataatta
     1081 agccatctac atcctctaaa tagcctttat cagccaataa tttggcacct tcttgttctt
     1141 tctcttcgcc agcagtagct agtaatctta tcgttccttg aggtaattga ttttgttctt
     1201 ttaattcaat gagtgtgatg accaaagcca tcagaccgcc tttcatatct gttgtgcctc
     1261 gaccatataa tttgccattt ttttctgtga gttgaaaagg gggataagtc caattatctt
     1321 gatttcctgc atcaacaaca tccatatgac cactcaatgc gagtataggt gagccgttac
     1381 cgatttctgc aacgatattg gcgcggtgtt cattaacttt caaaatttca gatttaatat
     1441 cgtacttgtc gaataaatct tttaaataat tacaaacgtc tatttcatta ttattttcag
     1501 tttgtagttc aacaatatct gctagtaatt gaattttttc tttttcacta aaagttgtca
     1561 ttaagctcac accttttcaa agtagtatat atatttatat aaacataatt tttattctta
     1621 aacataattt aaaatgcaga aagtggtgtg ttatttgatt tcgttctatg aaattaactg
     1681 tctagtatca acaatcttat taacactgat atcgggtatg cttaatttta tagtaaattg
     1741 tatgagaaag atgcaggata ttatttagct aataattata tataaatttc aaatcgatgg
     1801 ttattaacta ctaaataaaa acatttgcta aattaatgac tttgtacaca cattattttt
     1861 aaagaggata aagtatttaa taatattaac aaaatcattt aataaatagt taaatatata
     1921 ttctctattt ttgtgatatt attcacatgt cgatacatat caacaaatat caatcatacg
     1981 aaagaaggtt ataacaatga aaaataaaaa acgtgtttta atagcgtcat cattatcatg
     2041 tgcaatttta ttgttatcag cagcaacgac tcaagcaaat tcagctcata aagactcgca
     2101 agaccaaaat aagaaagaac atgttgataa gtctcaacaa aaagacaaac gtaatgttac
     2161 taataaagat aaaaattcac cagtacctga tgatattggt aaaaacggta aaatcacaaa
     2221 acgaactgaa acagtatatg atgaaaaaac aaatatactt caaaatttac aattcgactt
     2281 tatcgatgat ccaacttatg acaagaatgt attacttgtt aaaaaacaag gctcaattca
     2341 ttcaaattta aagtttgaat ctcataaaga agaaaaaaat tcaaattggt taaagtatcc
     2401 aagtgagtac catgtagatt ttcaagtaaa aagaaatcgt aaaactgaaa tattagacca
     2461 attgccgaaa aataaaattt caactgcgaa agtagacagt acattttcat atagctcagg
     2521 tggtaaattc gattcaacga aaggtattgg acgaacttca tcaaatagct actccaaaac
     2581 gattagttat aatcagcaaa attatgacac aattgccagc ggtaaaaata ataactggca
     2641 tgtacactgg tcagttattg cgaatgactt gaagtatggt ggagaagtga aaaatagaaa
     2701 tgatgaatta ttattctata gaaatacgag aattgctact gtagaaaacc ctgaactaag
     2761 ctttgcttca aaatatagat atccagcatt agtaagaagt ggctttaatc cagaattttt
     2821 aacttattta tctaatgaaa agtcaaatga gaaaacgcaa tttgaagtaa catacacacg
     2881 aaatcaagat attttgaaaa acagacctgg aatacattat gcacctccaa ttttagaaaa
     2941 aaataaagat ggtcaaagat taattgtcac ttatgaagtt gattggaaaa ataaaacagt
     3001 taaagtcgtt gataaatatt ctgatgacaa taaaccttat aaagaaggat aatattgaaa
     3061 gggcggatta ctaatgatta aacaattata caaaaacatc acaatttgta gtttagcaat
     3121 atctactgta ttaactgtat ttccggcaac ttcttatgca aaaattaatt ctgaaattaa
     3181 agctgtttct gagaagaatc ttgatggtga tactaaaatg tatacacgta cagctacaac
     3241 aagtgatagt caaaaaaata ttactcaaag cttacaattt aatttcttaa ctgaacctaa
     3301 ttatgataaa gaaacagtat ttattaaagc aaaaggtaca attggtagtg gtttgagaat
     3361 tttagaccca aatggttatt ggaatagtac attaagatgg cctggatctt attcagtttc
     3421 aattcaaaat gttgatgaca acaacaatac aaatgtgact gactttgcac caaaaaatca
     3481 ggatgaatca agagaagtta aatatacgta tggttataaa acaggtggag atttttcgat
     3541 taatcgtgga ggcttaactg gaaatattac aaaagagagt aattattcag agacgattag
     3601 ttatcaacaa ccatcatatc gtacattact tgatcaatct acgtcacata aaggtgtagg
     3661 ttggaaagta gaagcacatt tgataaataa tatgggacat gaccatacga gacaattaac
     3721 taatgatagt gataatagaa ctaaaagtga aatcttttct ttaacacgaa atggaaattt
     3781 atgggcgaaa gataatttta cgcctaaaga caaaatgcct gtaactgtgt ctgaagggtt
     3841 taatccagaa tttttagctg ttatgtcaca tgataaaaaa gatgaaggta aatcaaaatt
     3901 tgttgttcat tataaaagat caatggatga gtttaaaata gattggaatc gtcatggttt
     3961 ctggggctat tggtctggcg aaaaccatgt agataaaaaa gaagaaaaat tatcagcatt
     4021 atatgaagtt gattggaaga cacatgatgt gaagtttgta aaagtactta atgataatga
     4081 aaagaaataa gtaataaaag ttgcctgcta catagaatgt agtaggtaac ttttatttat
     4141 atttgagtag atagatttat tatgatgtgc agtgtatcaa tcatatttaa ctgcagacga
     4201 agtatatcta tattaatgaa gaaatatggg agtggaacag aaatgataaa
//
LOCUS       DALMNS010000135         3936 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.135, whole genome shotgun sequence.
ACCESSION   DALMNS010000135 DALMNS010000000
VERSION     DALMNS010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3936
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.135"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(140..1621)
                     /gene="cls"
                     /locus_tag="O6Y56_002440"
     CDS             complement(140..1621)
                     /gene="cls"
                     /locus_tag="O6Y56_002440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HDB5575675.1"
                     /translation="MQFSFSNDLGTLFTIILAIAFIINLVLAFIIIFLERNRHTASST
                     WAWLFVLFVLPLIGFILYLFFGRTVSARKLNKNNGNVLTDFDALLKQQIESFDKGNYG
                     TDNKQVQKHHDLVRMLLMDQDGFLTENNKIDHFIDGNDLYDQVLKDIKNAKEYIHLEY
                     YTFALDGLGQRILKALEEKLKQGLEVKILYDDVGSKKVKMANFDHFKSLGGEVEAFFA
                     SKLPLLNFRMNNRNHRKIIVIDGQLGYVGGFNIGDEYLGLGKLGYWRDTHLRIQGDAV
                     DALQLRFILDWNSQAHRPQFEYDEKYFPKKNKSFGNAPIQIAASGPASDWHQIEYGYT
                     KMIMSAKKSVYLQSPYFIPDNSYINAIKIAAKSGVDVHLMIPCKPDHPLVYWATFSNA
                     SDLLSSGVKIYMYENGFIHSKMCLIDDEIVSVGTANMDFRSFELNFEVNAFVYDENLA
                     KDLRAAYEHDITKSKQLTEESYANRPLSVKFKESLAKLVSPIL"
     gene            complement(1678..1875)
                     /locus_tag="O6Y56_002441"
     CDS             complement(1678..1875)
                     /locus_tag="O6Y56_002441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575676.1"
                     /translation="MEQIKLKTFTAETLELLESNINEFLASEEAANLKLVNITIKEIE
                     ERTFPNNEEEFNAILTLSVNK"
     gene            2145..3170
                     /locus_tag="O6Y56_002442"
     CDS             2145..3170
                     /locus_tag="O6Y56_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low specificity L-threonine aldolase"
                     /protein_id="HDB5575677.1"
                     /translation="MISFENDYLEGAHEKVLKRLVDTNLVQASGYGFDQFTAQAIEKI
                     KDTIDCPNATIRFLVGGTQTNQVVINSMLESYEGVISADTGHVAVHEGGAIEYSGHKV
                     ITIPSKEGKVSASDVETYMETFKSDFKKDHMVFPGMVYISHPTEYGTLYSKSELEELC
                     KVCKQYQLPLFMDGARLGYGLMSDQSDMTIKDIAKYCDVFYIGGTKIGALCGEAIVFT
                     KNNEPKQFTTRIKHHGALLAKGRLTGIQFLELFTDNLYFNISRHAIEMANKMKDGFIN
                     KGYRLYFDSPTNQQFFILSNEKIAELEQKVKFAVWEKYDDQHRVVRFATSWATTEEIL
                     NKLLELI"
BASE COUNT         1351 a          582 c          575 g         1428 t
ORIGIN      
        1 atttattcga tttaaaatag gatactttgt cattggttca aaatgacatt tgtcacttca
       61 attgtttaca taatataatt atagtaatta attacagaaa taaaaaaagc ctcattaaaa
      121 tgagacttga aattattctt tataaaattg gcgaaactaa tttagctaac gattctttaa
      181 acttaacaga caatggtcta ttagcataag attcttcagt aagttgtttt gattttgtaa
      241 tatcatgttc ataagccgct cttaaatctt tagcaagatt ttcatcatat acaaaggcat
      301 ttacttcaaa atttaattca aaacttctaa agtccatatt tgctgtgccc actgatacga
      361 tttcatcatc aattaagcac attttagaat gtataaatcc attttcatac atataaattt
      421 taacaccact ggataataag tcagatgcat ttgaaaatgt cgcccaataa actaaaggat
      481 gatctggctt acatggaatc attagatgaa catctacccc tgatttagct gcaattttaa
      541 tggcatttat atatgagtta tccggaatga aatagggcga ttgcaaatat accgacttct
      601 tagcgctcat aatcattttt gtataaccat attcaatttg atgccagtca ctggcgggac
      661 cacttgcagc aatctggatt ggcgcattac cgaatgattt attcttttta ggaaaatatt
      721 tttcatcata ttcaaattga ggtcgatgtg cttgcgaatt ccagtctaaa ataaatcgca
      781 actgcagtgc atcaaccgca tccccttgta tacgtaaatg cgtatctctc caatatccta
      841 attttcctaa acctaaatat tcatcaccaa tgttaaatcc tccgacataa cctagttgac
      901 catcgattac gatgattttt ctatgatttc tattattcat tctgaaattc aataacggta
      961 atttagaagc aaaaaatgct tcaacttctc cacctaacga tttaaaatga tcaaagttag
     1021 ccatcttaac tttctttgaa ccaacgtcat catataaaat tttcacttct agaccttgtt
     1081 tcaatttctc ttctaacgct tttaaaattc tttggcctaa gccatctaga gcgaatgtat
     1141 aatactctaa atggatgtat tctttagcat ttttaatatc ttttaaaact tgatcatata
     1201 aatcatttcc atcaataaaa tggtcaattt tattattttc agttaaaaag ccatcttgat
     1261 ccattaacaa catacgtacc aaatcatggt gcttttgaac ttgtttatta tctgtaccat
     1321 aattaccttt atcaaagctt tcaatttgct gctttaaaag cgcatcaaaa tctgttaaca
     1381 cgttcccatt atttttattt agtttacgcg cagaaaccgt tcttccaaaa aatagataaa
     1441 ggataaaacc aattaatggt aatacaaaaa gtacaaataa ccacgcccat gttgaactgg
     1501 ctgtatgtct atttctttct aaaaaaataa taataaaagc tagaaccaaa ttaatgataa
     1561 aggcaattgc taaaatgatg gtaaaaagtg ttcctaaatc atttgaaaat gaaaattgca
     1621 tagtttattt ctcctataaa gaaaggcaca aaaaactttt gcacctttcg ttccagatta
     1681 tttatttaca gatagagtta atattgcatt aaactcttct tcattatttg gaaatgttct
     1741 ttcttcaatt tcttttattg taatatttac taatttcaaa tttgcagctt cttcagaagc
     1801 taaaaattca ttgatatttg attctaataa ttctaaagtc tcagctgtaa aagttttaag
     1861 tttaatttgt tccatttaaa tcccctcttt tctctatttc ctaaatcata gaacttttaa
     1921 cagtaaaatt caatcattaa tatatgtgtt tcggcacgca aagtaattgc gataaaaaat
     1981 taaataattt tcataatgta ttgtttgatg tataatatat ttattcaact tcgcgataat
     2041 gcgatacaaa ctttaaccat tcataataca ttttaaatat cgaactagtt ttgaaattgg
     2101 tttatcttat taaaatgttg atattagttt tagggggaaa tgtagtgatt tcattcgaaa
     2161 atgattattt agaaggtgct catgaaaaag tattaaaacg attagtagat acaaatcttg
     2221 tacaagcttc gggatatggc tttgatcaat tcacagctca ggcaattgaa aagattaaag
     2281 atacaattga ctgtccaaat gctactattc gttttttagt aggtggaaca caaaccaatc
     2341 aggttgttat taattcaatg ttagaaagtt acgaaggggt catttcagca gacactggtc
     2401 atgttgctgt acatgaaggt ggtgcaattg aatatagtgg acataaagta attactatac
     2461 catctaagga aggaaaagtt agtgcttcag atgttgaaac ttacatggag acatttaaaa
     2521 gtgattttaa aaaggaccat atggtattcc caggaatggt atatatttct catcctacag
     2581 aatatggcac attatactct aaatcagaat tggaagagtt atgtaaagta tgtaagcaat
     2641 atcagcttcc attatttatg gatggtgcac gattagggta tggattgatg agtgaccaat
     2701 cagacatgac tattaaagat atcgctaaat attgtgatgt attttatata ggtggtacga
     2761 agattggtgc actttgcgga gaagctattg ttttcacaaa aaataatgaa ccgaaacaat
     2821 ttaccactcg aatcaaacat cacggtgccc ttttagcaaa aggacggtta acaggcatac
     2881 aatttttaga attatttacg gataatttat attttaatat aagcagacat gctatcgaaa
     2941 tggcaaataa gatgaaagac gggtttataa ataaaggcta tcgtctttac tttgattctc
     3001 caaccaatca acaatttttt attttaagta acgagaaaat agcagagtta gaacaaaaag
     3061 ttaaatttgc tgtttgggaa aaatacgatg atcaacatcg tgttgttaga ttcgcaacca
     3121 gctgggcgac aaccgaagaa attttaaata aactattaga attaatctaa taatgctgca
     3181 atatgtcatc tggcaaatca tttattaatt aatcaattaa gatcagttga gtagttgtgt
     3241 ttatttatat atgaaactgc tcatttgaag ccgttgatga tgtaaaatta cattatccaa
     3301 aacaagatac tacagattat tgagtatctt gttttatttt atatatttaa aaatgttaat
     3361 ttgtgctgta tttactttaa tttgacgaga tttgagaagt attatgatgg ttatagttat
     3421 tttatgaaag tgatgtatta acaatcgaat tactaagtat atattggtag gaatatcgat
     3481 gtttagttta aatgaaatgc actatttaag tttttaatat ggagatgttt gtgacttttc
     3541 gatgattaag atttttatag gtgtgcatct tttcaaataa actttgtgtt taaaattgag
     3601 cttaggaaat caataggttt agatgaggat attgttgaag gtatgtgtct tgtatcctta
     3661 gttgttataa aagcgcaaaa aatagcaccg ctttctcttt atctgtgtag aaaggatgct
     3721 atttatcttt tgaatttgaa ttcttatttt ctaattctat tgctttcttg tattctttat
     3781 ccaataattc ttgtgactgt ttattagtta tttcaccatc taactgtgca aaatacattt
     3841 taatcaccta actttatata ttatgttacc actattatat aatctcttta gaatcatatc
     3901 aatatcctta tgattgaatt tttttatatt cttatt
//
LOCUS       DALMNS010000136         3844 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.136, whole genome shotgun sequence.
ACCESSION   DALMNS010000136 DALMNS010000000
VERSION     DALMNS010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3844)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3844)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3844
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.136"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(262..612)
                     /locus_tag="O6Y56_002443"
     CDS             complement(262..612)
                     /locus_tag="O6Y56_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement inhibitor SCIN family protein"
                     /protein_id="HDB5575678.1"
                     /translation="MKFKKYILTGTLALLLSSTAIATLEGNKVEASSKKDYIIQSEYH
                     DKQIADELRSLLNKSNVYDLAAGSLNRYYKQTIMMNEHRAKAALRSNNFDKMAEAKVA
                     LEKIYKEIYEIINR"
     gene            complement(766..1263)
                     /gene="efb"
                     /locus_tag="O6Y56_002444"
     CDS             complement(766..1263)
                     /gene="efb"
                     /locus_tag="O6Y56_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement convertase inhibitor Efb"
                     /protein_id="HDB5575679.1"
                     /translation="MKNKLIAKSLLTIAAIGITTTTIASTADASEGYGPREKKPVSIN
                     HNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTD
                     VTIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLK
                     QGLVK"
     gene            complement(1522..2028)
                     /locus_tag="O6Y56_002445"
     CDS             complement(1522..2028)
                     /locus_tag="O6Y56_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575680.1"
                     /translation="MIIKILTILLLLCILSYLVTNRKKPFLFLKTLFMGVVFIFIGYI
                     SLAISAVIIYGIIQFITIDFGSFFLMGIILILISSIFQLFIVRLLFRKKNVDLTEVVV
                     LEHLIQWFLVYFAIYQAVNEKMDINDINIDNFQSVFFDVSNLNLVILPTLIISWVTIF
                     NYRMRSYK"
     gene            2699..3097
                     /locus_tag="O6Y56_002446"
     CDS             2699..3097
                     /locus_tag="O6Y56_002446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000739567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyl peptide receptor-like 1 inhibitory
                     protein"
                     /protein_id="HDB5575681.1"
                     /translation="MKKNITKTIIASTVIAAGLLTQTNDAKAFFSYEWRGLEIAKNLA
                     DQAKKDDERADKLIKEADEKNEHYKGKTVEDLYVIAKKMGKGNTRAVVKIKDGGKNGY
                     YTFDITRPLEEHRKNIPVVGSGEISEITWQ"
     gene            complement(3467..3796)
                     /gene="ecb"
                     /locus_tag="O6Y56_002447"
     CDS             complement(3467..3796)
                     /gene="ecb"
                     /locus_tag="O6Y56_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement convertase inhibitor Ecb"
                     /protein_id="HDB5575682.1"
                     /translation="MKKNFIGKSILSIAAISLTVSTFAGESHAQTKNAETVKKYNEYQ
                     TNFKKQVNKKVVDAQKAVNLFKRTRTVATHRKAQRAVNLIHFQHSYEKKKLQRQIDLV
                     LKYNTLK"
BASE COUNT         1350 a          585 c          464 g         1445 t
ORIGIN      
        1 actagaactg gaaatgataa tttaataatg tacaattttg attgttaaaa catgtacaat
       61 tttaaaaaaa taggagagca aaataaataa ttgatatagt tattttgaga gtaacactag
      121 gaactattgt atttatatta gtctccccta cttttaaatg tcattcatta tacataagca
      181 ttttgatata gaatttatca catatgcaaa ttaaaaacag gttaagacca tttttactgc
      241 tgtctcaacc tgttttattt attatctatt tataatttca taaatttctt tgtatatttt
      301 ttctaacgca actttagctt cagccatttt atcgaaatta ttgctcctta atgccgcttt
      361 agctctatgt tcattcatca taatcgtttg cttataatag cgatttaagc tacctgcagc
      421 taaatcatat acattagatt tattaagtaa tgatcttagc tcatctgcaa tttgtttatc
      481 atgatactca ctttgaatta tataatcctt cttactactt gcctcaactt tattcccttc
      541 taaagttgct atcgctgttg atgataaaag taatgctaat gttcctgtta atatatattt
      601 tttaaatttc attgtaaact ctccttaaaa ttgatactta ctgattatat agtcaatttc
      661 aggacaatta cattaacctg tcattaaata gattactttt ttcattaata aaaattaaca
      721 taacatttaa ttatttattt ccacataaca gcaacgattg aagttttatt ttactaatcc
      781 ttgttttaat acattatcaa ttcgctcttg taagaccatt ttcttaactt tgtattcaaa
      841 cgaaactaag ttgactgcct tttgtgcttt tctgtgtgca ctgacagtat gtgttttttc
      901 aaattctctc acaagatttt gagcttgaat caatttttgt tcctttttaa tagttacatc
      961 tgttttcgct gctggtttat taaattgtgg acgtgcacca tattcgaatg taccatcgtt
     1021 aaattctaaa atattatagt catgtttgaa tttaatatat ttaggtgttg agttaaattt
     1081 tggtctagat tgatatttaa aagtaccatc attgtactct acgatattgt gattaatact
     1141 cactggtttc ttttctcttg gaccgtatcc ttcgctcgca tctgctgttg acgcaattgt
     1201 agttgtagta ataccaattg ccgctattgt taataaagat tttgctatca atttattttt
     1261 catgttaatt atcctccaaa ttattatctt acatttatta agttatccta tttatacaac
     1321 ttttgaaatt aactaattat taattaacta taaacacttt ataatataga caaaatatag
     1381 ttatctatct tgtgactcat cagcacttat acactagtca aaaaattcat gcctctactt
     1441 tttcgaattt caaaaataaa accacacaac aaaaaagaca ccatttgaat gttggtgtct
     1501 gatggtataa tttcatagat tttatttgta acttctcatc ctatagttaa atattgttac
     1561 ccagctaatg attaatgttg gtagaattac taaattcaaa ttagacacgt caaaaaagac
     1621 agattggaaa ttgtcgatat taatatcatt aatgtccatt ttttcattta ctgcctgata
     1681 gatcgcaaag taaactaaga accattgaat taaatgttct aaaacgacaa cctctgtcaa
     1741 atcgacattc ttttttctaa aaagtaatct aactataaat aattggaata tacttgaaat
     1801 caagatcaat ataataccca ttaagaaaaa actaccaaaa tcaattgtga taaattgaat
     1861 aataccataa ataattacgg cagatatcgc cagtgaaata tatcctataa agataaatac
     1921 cacacccata aagagtgtct ttaagaacag aaaaggcttc tttctatttg taaccaaata
     1981 gctcaatata caaagtagta atagaattgt taaaatttta attatcatcg tttgacctca
     2041 atatatttat ttatatcttt attattgacc acgaaaaaat aacaatcact taagtgattg
     2101 ccaataatac tcaatgccta ctctatagta atcttggcac gtgattttac actattttat
     2161 ctatttaaaa atgtaagtgt tgaattatgc ttacttcgaa aatgtataat tcaactaaat
     2221 agtataatat ttaacttata tattaatcat aacatatcaa ccttaattag aatatatctc
     2281 ttatttcttt ataagtaaaa ttatacatat taatcacttc tctactatgt gtcatttctt
     2341 tgctttataa acattaatta tcaaaaaagc tatgtgtata acaatttgga gtgtttgtat
     2401 actcaacata gcaaacaaaa tgcagagaaa tatatatagt tttaacaata aaaatcattc
     2461 aatcatagtt gagtgacgtt tactactatt attatactat caacaaattc aataatacct
     2521 caaataaaaa taataacatc aaattcatca ttattctttt tcgattgcat taaaccttat
     2581 taatttgcac ttaattttaa ttaatgaagt gttaactggt aaatgcatga aaccgtttgt
     2641 aaaatagcag tgtactcgca ttagtaagta caaatttatt ttacagggag aacttattat
     2701 gaaaaaaaat atcacaaaaa ctattatcgc atctacagta atcgctgcag gtcttttaac
     2761 tcaaactaat gatgctaaag ctttctttag ttatgaatgg agaggtttag aaatcgctaa
     2821 aaatttagca gatcaagcta aaaaggacga tgaacgtgct gataaattaa taaaagaagc
     2881 cgatgaaaaa aacgaacact ataaaggtaa aactgttgaa gacttatatg taatagctaa
     2941 aaagatgggt aaaggcaata caagagctgt agtaaaaatc aaagacggtg gtaaaaatgg
     3001 ttattataca ttcgatatca ctcgcccatt agaagaacat agaaaaaata ttccagtggt
     3061 tggttctggt gaaatcagcg aaattacttg gcaataatta atatactgaa ttaaatagtt
     3121 gtacgccaaa cgttagaaaa caatgctaac gttttggcgt gcttttttat tttaggtaac
     3181 ttccaattta tttagcatct ttacgactgt ttaataaagc acgtatgatt aacacggttg
     3241 ccactatatc cgttacaatt tttatgattg ttaatacatt cgatttcctt ttcacaatag
     3301 ccacctcgct tattcaaaac ataaacaact attgcattca cttttaagta attatatata
     3361 agatttatcc caataacctc accattcaaa tgaacacaac attataaatt aattatacct
     3421 ttggatatag caaaaaagcc acactctata gcatggcttc tatcaattat tttaaagtat
     3481 tatattttaa aactagatcg atttgtcttt gtaatttttt cttttcataa ctgtgttgga
     3541 aatgaattaa gttaacagct ctttgtgctt tacggtgtgt tgcaacagtt cttgtacgtt
     3601 tgaacaagtt tacagctttt tgtgcatcca caactttttt atttacttgt tttttaaagt
     3661 ttgtttgata ctcgttatat ttttttacag tttcagcgtt tttagtttgt gcatgagatt
     3721 caccggcaaa cgttgatacc gttaaactaa tagcagctat gcttaaaatt gatttcccaa
     3781 taaaattctt tttcataatt aataacacct atcctcaaat atttattttg tatatattta
     3841 taat
//
LOCUS       DALMNS010000137         3810 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.137, whole genome shotgun sequence.
ACCESSION   DALMNS010000137 DALMNS010000000
VERSION     DALMNS010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3810)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3810)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3810
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.137"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            34..2739
                     /gene="acnA"
                     /locus_tag="O6Y56_002448"
     CDS             34..2739
                     /gene="acnA"
                     /locus_tag="O6Y56_002448"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HDB5575683.1"
                     /translation="MAANFKEQSKKHFDLNGQSYTYYDLKAVEEQGITKVSNLPYSIR
                     VLLESLLRQEDDFVITDDHIKALSQFGKDGNEGEVPFKPSRVILQDFTGVPAVVDLAS
                     LRKAMDDVGGDITKINPEVPVDLVIDHSVQVDSYANPEALERNMKLEFERNYERYQFL
                     NWATKAFDNYNAVPPATGIVHQVNLEYLASVVHVRDVDGEKTAFPDTLVGTDSHTTMI
                     NGIGVLGWGVGGIEAEAGMLGQPSYFPIPEVIGVRLVNSLPQGATATDLALRVTQELR
                     KKGVVGKFVEFFGPGVQHLPLADRATIANMAPEYGATCGFFPVDDESLKYMKLTGRSD
                     EHIALVKEYLKQNHMFFDVEKEDPNYTDVIELDLSTVEASLSGPKRPQDLIFLSDMKS
                     SFENSVTAPAGNQGHGLDKSEFDKKAEINFKDGSKATMKTGDIAIAAITSCTNTSNPY
                     VMLGAGLVAKKAVEKGLKVPEYVKTSLAPGSKVVTGYLRDAGLQPYLDDLGFNLVGYG
                     CTTCIGNSGPLLPEIEKAIADEDLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAY
                     ALAGTVDIDLQNEPIGKGNDGEDVYLKDIWPSIKEVSDTVDSVVTPELFIEEYNNVYN
                     NNELWNEIDVTDQPLYDFDPNSTYIQNPSFFQGLSKEPGTIVPLNGLRVMGKFGDSVT
                     TDHISPAGAIGKDTPAGKYLQDHQVPIREFNSYGSRRGNHEVMVRGTFANIRIKNQLA
                     PGTEGGFTTYWPTNEVMPIFDAAMKYKEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLG
                     VKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNIDENVQPHDYV
                     RVTAKKQDGDLVEFDAMVRFDSLVEMDYYRHGGILQMVLRNKLAQ"
     gene            2918..3385
                     /locus_tag="O6Y56_002449"
     CDS             2918..3385
                     /locus_tag="O6Y56_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDB5575684.1"
                     /translation="MIYSITEIEARYAETDKMGVIYHGNYATWFEVARLDYISKLGFS
                     YADMEKQGIISPVTDLNVNYKKSIFYPEKVKVKTWVEKYSRLRSVYKYEIFNEKGELA
                     TTGSTELICIKEDTFKPIRLDRYFPDWHEAYSKVQTLNNEGRTVEIMDGIDSL"
     gene            complement(3592..>3810)
                     /locus_tag="O6Y56_002450"
     CDS             complement(3592..>3810)
                     /locus_tag="O6Y56_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575685.1"
                     /translation="VFFVRYGGEFQLKQGFSPAFTVEPKEDVDIGYEQQYDDLNVVVA
                     EKDLWYFEDDHIIVNVVDHEDEISYSTK"
BASE COUNT         1291 a          565 c          746 g         1208 t
ORIGIN      
        1 taaatataaa aatgtatcaa gggggatcat taaatggctg caaattttaa agagcaatca
       61 aaaaaacatt ttgacttgaa tggccaaagt tatacttact atgatttaaa agctgtagaa
      121 gagcaaggta ttactaaagt ttccaattta ccttattcaa ttcgtgtttt gttagaatct
      181 ttacttcgtc aagaagatga ttttgtaatt acagacgatc atattaaagc tttaagtcag
      241 tttggaaaag atggaaatga aggcgaggta ccatttaaac cttctcgtgt tattttacaa
      301 gatttcacag gtgtaccagc cgtagttgat ttagcttctt tacgtaaagc aatggatgac
      361 gttgggggag atattactaa aattaatcca gaagtaccgg tggatttagt tattgaccac
      421 tcagttcaag tggatagcta tgcaaatcca gaggctcttg aacgtaatat gaaattagaa
      481 tttgaacgta actatgaacg ttatcagttt ttaaattggg caacgaaagc atttgataat
      541 tacaatgcag ttcctcctgc aactggaata gttcaccaag ttaacttaga atatttagca
      601 agtgttgtac atgttcgtga tgtagatggt gaaaaaactg catttccaga tacattagtt
      661 ggtactgatt cacatacaac aatgataaat ggtattggcg tactaggatg gggtgttggt
      721 ggtattgaag ctgaagctgg aatgcttgga caaccttctt atttcccaat tccagaggtt
      781 attggtgtac gactagtaaa ttcattacca caaggcgcaa cagcaactga tttagcgtta
      841 agagtaactc aagagctacg taaaaaaggt gttgttggta aatttgtaga gttctttggt
      901 ccaggtgtac aacatttacc actagcagac cgtgctacaa tcgcaaacat ggcaccagag
      961 tatggagcaa cttgcggatt cttcccagtt gatgatgaat ctcttaaata tatgaagtta
     1021 actggtagat cagacgaaca tatcgcgcta gtaaaagaat atttgaaaca aaaccatatg
     1081 ttctttgatg ttgaaaaaga agatcctaat tatacagatg ttatcgaatt ggatttatca
     1141 acagttgaag catcgctttc aggaccaaaa cgtcctcaag atttaatttt cttaagtgat
     1201 atgaaatcat catttgaaaa ttctgtaaca gctccagcgg gcaaccaagg acacggttta
     1261 gataaaagtg aatttgataa gaaagctgaa attaacttca aagatggatc aaaagctaca
     1321 atgaaaacag gtgatattgc aatagcagca attacatcat gtacaaatac atctaaccct
     1381 tatgtaatgt taggtgcagg tttagttgct aaaaaagcag ttgaaaaagg cttgaaagtt
     1441 cctgaatacg ttaaaacttc tctagcacca ggttcaaaag ttgttaccgg atatttaaga
     1501 gatgctggct tacaacctta tttagatgat ttaggcttca acttggttgg ttatggatgt
     1561 acaacttgta tcggtaattc aggtccttta ttaccagaaa ttgaaaaagc gattgctgat
     1621 gaggacctat tagtgacatc tgtattatct ggtaaccgta actttgaagg tcgtatccat
     1681 cctcttgtta aagccaatta cctagcttca ccacagttag ttgttgctta tgcattagct
     1741 ggaacggttg atattgattt acaaaatgaa cctattggta aaggtaatga cggtgaagat
     1801 gtatatttga aagatatttg gccatcaatt aaagaagttt cagataccgt tgatagtgtt
     1861 gtaacacctg aattatttat tgaagaatat aataatgtat acaataacaa tgaattatgg
     1921 aatgagattg atgtaactga tcaacctcta tatgactttg atcctaattc aacatacatt
     1981 caaaatccat cattcttcca aggattatct aaagaaccgg gtacgattgt tccattaaat
     2041 ggtttacgtg ttatgggtaa attcggtgat tctgtgacaa ctgaccacat ctctccagca
     2101 ggtgcaattg gtaaagatac gccagctggt aaatatttac aagatcatca agtgcctatt
     2161 cgtgaattta attcatatgg ttcaagacgt ggtaatcacg aagtaatggt tcgaggtacg
     2221 tttgctaata tacgtattaa aaaccaatta gcgccaggta ctgaaggtgg ttttacaact
     2281 tattggccaa caaatgaagt aatgcctatc tttgatgctg caatgaaata taaagaagat
     2341 ggtacaggtt tagttgtatt agctggtaac gattatggta tgggttcatc tcgtgactgg
     2401 gcagcaaaag gtacaaactt attaggtgtt aaaacggtta ttgcacaaag ttatgaacgt
     2461 atccatcgtt caaatttagt tatgatgggt gtattaccat tagagtttaa aaaaggtgaa
     2521 tcagctgatt ctcttggtct agatggtaca gaagaaattt ctgttaatat tgatgaaaat
     2581 gttcaaccac atgactacgt cagagttact gctaagaagc aagatggtga tttggtagaa
     2641 tttgacgcta tggttcgttt tgactcactt gttgaaatgg attactatcg tcacggtgga
     2701 attttacaaa tggttttaag aaataaatta gcgcaataaa aatagatatc acagtaaaat
     2761 tttaatcggt atttgaggca ctttgatagt gctcaaaaat acctctataa actttatgat
     2821 ttaataggtc ggttcaaaac ctttgtgttc ttggccggcc tcttcttgta ttttatgtta
     2881 gaatgagata taaagttaaa ctgaaagaag gcttaaaatg atatatagta ttacagaaat
     2941 agaagcgcgt tatgctgaaa ctgataagat gggtgtaatt tatcacggga attatgcaac
     3001 ttggtttgaa gttgcgcggt tggattatat atcgaagtta ggttttagtt atgctgatat
     3061 ggaaaaacaa ggaatcattt cacctgtgac tgacctcaat gtcaattata aaaagtctat
     3121 tttttatcca gaaaaagtta aagttaaaac ttgggttgaa aaatattcga gattacgttc
     3181 agtgtataaa tatgagattt ttaatgaaaa aggtgaactt gcaactacag gttccacaga
     3241 attgatttgc attaaagaag atacttttaa gcctatacgg ttggatcgtt atttcccaga
     3301 ttggcatgaa gcctatagta aagtgcaaac gctcaataat gaagggagaa cagtagagat
     3361 aatggatggt attgattctt tataagttac tataaatgtt tggagaggca atattaacaa
     3421 ttaatctata aaaaatagcc aatatgttaa cattaatgta attagcgtga agataagtta
     3481 atatatagca aaaacgaact tgttcataca acatcagatg tgttaaacca aagtacaact
     3541 tgtgaggttc agtacacatc agaatgtgta aacaagttcg ttttatttta gttattttgt
     3601 ggaataagaa atttcatctt cgtgatcaac tacatttaca ataatgtggt catcttcaaa
     3661 gtaccacaaa tctttttccg ctacgacaac atttaaatcg tcatattgtt gttcatagcc
     3721 aatatcaaca tcttcctttg gttcaactgt aaaagcagga ctaaatcctt gcttgagttg
     3781 gaattcgcca ccatatctta caaaaaacac
//
LOCUS       DALMNS010000138         3734 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.138, whole genome shotgun sequence.
ACCESSION   DALMNS010000138 DALMNS010000000
VERSION     DALMNS010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3734
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.138"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..567
                     /locus_tag="O6Y56_002451"
     CDS             <1..567
                     /locus_tag="O6Y56_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HDB5575686.1"
                     /translation="ASDSDSDSDSDSDSDSDSDSDSESDSDSDSVSDSDSDSDSDSDS
                     NSESDSDSDSDSDSDSASDSDSGSDSDSDSDSDSDSDSDSDSDSDSTSDSDSDSTSDT
                     GSDNDSDSESDSNSDSDSGSNNNVVPPNSPKNGTNASNKNEAKDSKEPLPDTGSEGEE
                     NTSLIWGLLASLGSLLLFRRKKENKDKK"
     gene            788..2296
                     /gene="vwb"
                     /locus_tag="O6Y56_002452"
     CDS             788..2296
                     /gene="vwb"
                     /locus_tag="O6Y56_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000791704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="von Willebrand factor binding protein Vwb"
                     /protein_id="HDB5575687.1"
                     /translation="MKNKLLVLSLGALCVSQIWESNRASAVVSGEENPYVSKALSVSG
                     QKSNNLTLKQYKDSLRSVMCTSEINKNDGYDEPEYKEAMDTYRKKLFAELDALNKFLD
                     EERKIESSKKNNNQVPNGVLGLTHQRYLAIHEAIKENKNEFERKTQDIESRNPDLKKF
                     DRDKDYEVRVKLNELENKVLMLGHAFPNKHEARENLYNKLDLIVGRSDDEREERHPQN
                     DRLSKERVEDLESIIDEFFVEINENRPLNIPALVESNEENIVMAKKLKADTEEAKANT
                     SKRSKRSLNTQNHKSKINEVTEEQKANYEKKFKEIKERFLAKQKNKNNTPVVSLEYDE
                     DDNENDKQLVVSAPTKKPTSPTTYTETMTQVPMPTVERQAHQQIVYKAPKQLAGLNGE
                     SHDFTTTHQSPTTSNHTHNNVVEFEETSALPGRKSGSLVGISQIDSSHLTEREKRVIK
                     REHVREAQKLVDNYKDTHSYKDRLNAQQKVNTLSEGHQKRFNKQIDKVYNGK"
     gene            2647..3669
                     /gene="emp"
                     /locus_tag="O6Y56_002453"
     CDS             2647..3669
                     /gene="emp"
                     /locus_tag="O6Y56_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular matrix protein-binding adhesin
                     Emp"
                     /protein_id="HDB5575688.1"
                     /translation="MKKKLLVLTMSTLFATQIMNSNHAKASVTESVDKKFVVPESGIN
                     KIIPSYEESKNLPKVNVSNLTDNKNFVVSEDKLNKISDPSAASKIVDKNFVVPESKLG
                     NIVPEYKEINNRVNVATNNPASQQVDKHFVAKGPEVNRFITQNKVNHHFITTQTHYKK
                     VITSYKSTHVHKHVNHATDSINKHFIVKPSEAPRYTQPSQSLMINHYFAVPGYHAHKF
                     VTPGHASIKINHFCVVPQINSFKVIPPYGHNSHRMHVPSFQNNTTATHQNAKVNKAYD
                     YKYFYSYKVVKGVKKYFSFSQSNGYKIGKPSLNIKNVNYQYAVPSYSPTHYVPEFKGS
                     LPAPRV"
BASE COUNT         1518 a          560 c          624 g         1032 t
ORIGIN      
        1 gcgagtgatt cagattccga cagtgattcc gactcagaca gcgattcaga ttccgatagc
       61 gattcagaat cagatagcga ctccgactca gttagcgatt ctgactcaga cagtgactca
      121 gattcagata gcaattcaga atcagatagt gattcagatt ccgacagcga ctcagattca
      181 gcgagtgatt ccgactcagg tagtgactca gattccgata gcgattccga ctcagatagt
      241 gattcagatt ccgacagcga ctcagattca acgagtgatt ccgattctga ttcaacgagt
      301 gacacaggat cagacaacga ctctgactca gaaagtgatt caaatagcga ttccgactca
      361 ggttctaaca ataatgtagt tccgcctaat tcacctaaaa atggtactaa tgcttctaat
      421 aaaaatgagg ctaaagatag taaagagcca ttaccagata caggttctga aggtgaagag
      481 aatacgtcac taatttgggg attattagca tcattaggtt cattactact ttttagaaga
      541 aaaaaagaaa ataaagataa gaaataagta ataatgatat taaattaatt atatgattca
      601 tgaagaagcc accttaaaag gtggcttttt tacttggatt ttccaaatat attgtttgaa
      661 tataattaat aattaattca tcaacagtta attattttaa aaaggtagat gttatataat
      721 ttggcttggc gaaaaaatag ggtgtaaggt aggttgttga ttagggaaaa ttaaggagaa
      781 aatacagttg aaaaataaat tgctagtttt atcattggga gcattatgtg tatcacaaat
      841 ttgggaaagc aatcgtgcga gtgcagtggt ttctggggag gagaatccat atgtatcaaa
      901 agcgttatct gtatcagggc aaaagagtaa taatttaacc ttaaagcagt ataaagacag
      961 tcttaggagc gttatgtgta catcagaaat aaataaaaac gatggatatg atgaacctga
     1021 atataaagag gcaatggata cttaccgaaa aaaattattt gctgaactag atgcgctaaa
     1081 taaattttta gatgaagaaa gaaaaataga aagtagtaaa aaaaataaca accaagttcc
     1141 aaatggtgta ttgggcttaa cacatcaaag gtatttagct attcacgaag caataaagga
     1201 aaataaaaat gagtttgaaa gaaagacaca agatatcgaa agtagaaatc ctgatttgaa
     1261 aaaatttgat agagataaag attacgaagt tagagttaaa ttaaatgaac tagaaaataa
     1321 agtattaatg cttggacacg cttttccaaa taaacatgaa gctagagaga atctttataa
     1381 taaattagat ttgattgttg gccgtagtga tgatgagaga gaagaaaggc atcctcaaaa
     1441 tgataggtta tctaaagaac gagttgaaga tttagaatca attattgatg aattttttgt
     1501 tgaaatcaat gaaaataggc cgttgaatat accggcgtta gttgaaagta atgaagaaaa
     1561 tatagtaatg gcaaaaaaac taaaagcaga tacagaagaa gctaaagcga atacatctaa
     1621 aaggagtaaa agaagtttaa atactcaaaa tcacaaatct aaaataaacg aagtaactga
     1681 agaacaaaaa gctaattatg aaaagaaatt taaagaaata aaagaacgat ttttagctaa
     1741 acaaaaaaat aaaaataaca caccagttgt atcgttagaa tatgacgaag acgacaacga
     1801 aaacgacaag caacttgtgg tttctgcacc aacaaagaaa ccaacatcac cgactacata
     1861 tactgaaaca atgacacagg ttccaatgcc tacagttgaa cgtcaagcac atcaacaaat
     1921 cgtttacaaa gcaccaaaac aattggctgg attaaatggt gaaagtcatg atttcacaac
     1981 aactcatcaa tcaccaacaa cttcaaatca cacgcataat aatgttgttg aatttgaaga
     2041 aacgtctgct ttacctggta gaaaatcagg atcactggtt ggtataagtc aaattgattc
     2101 ttctcatcta actgaacgtg agaagcgtgt aattaagcgt gaacacgtta gagaagctca
     2161 aaagttagtt gataattata aagatacaca tagttataaa gaccgattaa atgcccaaca
     2221 aaaagtaaat actttaagtg aaggtcatca aaaacgtttt aataaacaaa tcgataaagt
     2281 atataatggc aaataattaa agcatggctg caaagcaaat aatgagtttg ccgtaaaaat
     2341 aacaacattt taaactagca ataaataata tcaaagtcat catttcaatg atgcaatcta
     2401 gtatagtcca cattctaaac aggtgtggac tattactttt ttcactttat attacgaaaa
     2461 aattattatg cttaactatc aatatcaata attaatttta agctgaaaaa caataaaaat
     2521 gttaagacaa cgtttacttc aagttaatta ttatactgaa aattctggta tataatgctg
     2581 ttagtgaata taacaggaaa attaaattgg ttataatatt gagtctatat aaaggagaaa
     2641 taacagatga aaaagaaatt attagtttta actatgagca cgctatttgc tacacaaatt
     2701 atgaattcaa atcacgctaa agcatcagtg acagagagtg ttgacaaaaa atttgtagtt
     2761 ccagaatcag gaattaataa aatcattcca tcttatgaag aatctaagaa tttgccaaaa
     2821 gtaaatgtta gtaatttaac tgacaacaaa aactttgtag tttctgaaga caaattgaat
     2881 aagatttcgg atccttcagc agcaagtaaa attgtagata aaaactttgt cgtaccagaa
     2941 tcaaagttag gaaacattgt accagagtac aaagaaatta ataatcgcgt gaatgtagca
     3001 acaaacaatc cagcttcaca acaagttgat aagcattttg ttgctaaagg cccagaagta
     3061 aatagattta ttacgcaaaa caaagtaaac caccacttca ttactacgca aacccactac
     3121 aagaaagtta ttacttcata caaatcaaca catgtacata aacatgtaaa tcatgcaacg
     3181 gattctatta ataaacactt tattgttaaa ccatcagaag cacctagata tacacaacca
     3241 tctcaatctc taatgataaa tcattatttt gcagtgcctg gatatcacgc gcataaattt
     3301 gtaacaccag ggcatgctag cattaaaatt aatcactttt gtgttgtgcc acaaataaat
     3361 agtttcaagg taattccacc atatggtcac aattcacatc gtatgcatgt accaagtttc
     3421 caaaataata caacagcaac acatcaaaat gctaaagtaa ataaagcata tgactataaa
     3481 tacttctatt cttataaagt agttaaaggt gtgaagaaat atttctcatt ttcacaatca
     3541 aatggttata aaattggaaa accatcatta aatatcaaaa atgtaaatta tcaatatgct
     3601 gttccaagtt atagccctac acactacgtt cctgaattta agggtagctt accagcacca
     3661 cgagtataaa tattggcact aagtttacga gatatgataa atacctatta ttttaaatat
     3721 agtctacaat ctat
//
LOCUS       DALMNS010000139         3716 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.139, whole genome shotgun sequence.
ACCESSION   DALMNS010000139 DALMNS010000000
VERSION     DALMNS010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3716
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.139"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..244
                     /locus_tag="O6Y56_002454"
     CDS             <1..244
                     /locus_tag="O6Y56_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HDB5575689.1"
                     /translation="SDSDSDSDSDSESDADSDSDAGKHTPVKPMSATKDHHNKAKALP
                     ETGSENNGSNNATLFGGLFAALGSLLLFGRRKKQNK"
     gene            607..>3716
                     /locus_tag="O6Y56_002455"
     CDS             607..>3716
                     /locus_tag="O6Y56_002455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HDB5575690.1"
                     /translation="MLNRENKTAMTRKGMVSNRLNKFSIRKYTVGTASILVGTTLIFG
                     LGNQEAKAAEVTNKEMKEDATSVNNDQVSKKVDTEQLNNGGNTSKVDTEQLKDENINK
                     VANQKEVTRVENSVASEKNNNSKPSENGKLQTSDVKKTEDNNATSDDQVTTTVNSQQL
                     NTDNTTSNETMSSAPINVSKDNLKINSEVVKNVVENSDNTDNANGSDVIMPKSTAPKR
                     LNTRMRIAAVQPSSTDSKNVNNLITSTTTLTVVDADNSKTIVPAQDYLSLKSQITVDD
                     KVKSGDYFTIKYSDTVQVYGLNPEDIKNIGDIKDPNNGETIATAKHDTVNNLITYTFT
                     DYVDRFNSVKMGINYSVYMDADTIPVDKKDVPFSVTIGNQTTTTTADITYPAYKEADN
                     NSIGSAFTETVSHAGNAEDPGYYNQVVYVNPMDKDLKGANLKVEAYHPKYPTNIGQIN
                     QNVTNIKIYRVPEGYTLNKGYDVNANDLVDVTDEFKNKMTYGSNQSVNVDFGDITSAY
                     VVMVNTKFQYTNSESPTLVQMATLSSTGNKSVSTGNALGFTNNQSAGAGQEVYKIGNY
                     VWEDTNKNGIQELGEVGVKGVTVVAYDNKTNKEVGRTITDEKGGYLIPNLPNGDYRVE
                     FSNLPQGYEVTPSKQGNNEELDSNGLSSVITVNGKDNLSADLGIYKPKYNLGDYVWED
                     TNKNGIQDQDEKGISGVTVTLKDENGNVLKTVTTDADGKYKFTDLDNGNYKVEFTTPE
                     GYTPTTVTSGSDIEKDSNGLTTTGVINGADNMTLDSGFYKTPKYNLGNYVWEDTNKDG
                     KQDSSEKGISGVTVTLKNENGEVLQTTKTDKDGKYQFTGLENGTYKVEFETPSGYTPT
                     QVGSGTDEGIDSNGTSTTGVIKDKDNDTIDSGFYKPTYNLGDYVWEDTNKNGVQDKDE
                     KGISGVTVTLKDENDKVLKTVTTDENGKYQFTDLNNGTYKVEFETPSGYTPTSVTSGN
                     DTEKDSNGLTTTGVIKDADNMTLDSGFYKTPKYSLGDYVWYDSNKDGKQDSTEKGIKD
                     VKVTLL"
BASE COUNT         1526 a          504 c          647 g         1039 t
ORIGIN      
        1 cagtgattca gattcagaca gcgactcaga ctcagaaagt gatgccgatt cagattcaga
       61 tgcaggaaaa catacacctg tgaaaccaat gagtgctact aaagaccatc acaataaagc
      121 gaaagcatta ccggaaacag gtagtgaaaa taacggctca aataacgcaa cgctatttgg
      181 tggattattc gcagcattag gatcattatt gttattcggt cgtcgtaaaa aacaaaataa
      241 ataatacagc ttataccagg tccgtgaggc ctggtttttc tgtttagaaa ttcctagata
      301 taaaacaaaa aatctttaag gaatagatac aatttaattt gttacagaaa tgtaattgtc
      361 tatgaattag aaaagctaag ttattaattt taagggcaaa taatactatt ttttatgata
      421 attaaataaa gattacaaaa ttcataaaaa cttttattta actacaaatg ttaaataacg
      481 ttttgcgata aagaaaaata attaaagtat tgtgctttat ctaaaaatgt aatactatat
      541 tgatatacat ttttgtattt aaaacaattg tattatttaa aaatttgatg aattaggagt
      601 aatctaatgc taaacagaga aaataaaacg gcaatgacaa gaaaaggcat ggtatccaat
      661 cgattaaata aattttcgat tagaaagtac acagtgggaa cagcatcaat tttagtaggt
      721 acaacattaa tttttggtct ggggaaccaa gaagcaaagg ctgcagaagt aaccaacaag
      781 gaaatgaagg aagatgcaac atcagtaaat aatgatcaag tgtctaaaaa agttgataca
      841 gagcaactaa ataatggcgg taatactagt aaagttgata cagagcaact aaaagatgag
      901 aatattaata aagttgctaa tcaaaaagaa gtaactagag tagaaaatag tgtcgcttca
      961 gaaaaaaata ataactctaa gccatctgaa aacggaaaat tacaaacgtc tgatgttaaa
     1021 aaaactgaag ataataatgc aacttcagat gatcaagtta ctactactgt taattcacag
     1081 caattaaata ctgataatac aacttcaaat gaaacaatgt cgtcagcacc aattaatgta
     1141 agtaaagata acttaaaaat taatagtgaa gtagttaaaa atgtagtaga aaatagcgat
     1201 aacactgaca atgcaaatgg ttcagatgtg attatgccaa aaagtacagc acctaaacgt
     1261 ttgaatacaa gaatgcgtat agcagcagta caaccatcat caacagactc taaaaatgtt
     1321 aataatttaa ttacttcaac tacaacttta actgtagtcg atgcagataa tagtaaaact
     1381 attgtacctg ctcaagatta tctatcattg aaatctcaaa ttacagttga tgacaaagtt
     1441 aaatcgggtg attatttcac aattaaatat tcagatactg ttcaagtata tggtttgaat
     1501 ccagaagata ttaaaaatat tggtgatata aaagatccaa ataatgggga aacaattgcg
     1561 actgcaaaac acgatactgt aaataattta attacatata catttacaga ttatgttgat
     1621 cgatttaatt cagtgaaaat gggaattaat tactcagttt acatggatgc agatacaatt
     1681 cctgtagaca agaaagatgt tccttttagt gtaactattg gaaatcaaac tacaactact
     1741 acagcagata ttacttatcc ggcttataaa gaagctgata ataattcaat agggtcagct
     1801 tttacagaaa cagtttctca tgcaggaaat gctgaagatc ctggttatta taaccaagta
     1861 gtttatgtga atcctatgga taaagattta aaaggggcta atttaaaagt tgaagcgtat
     1921 catccgaaat atccgactaa tattggtcaa attaatcaaa acgttactaa tataaaaata
     1981 tatcgtgttc ctgaaggata tacattgaat aagggatacg acgttaatgc taatgattta
     2041 gtagacgtaa ccgatgaatt taaaaataaa atgacctatg gatcaaatca aagtgttaat
     2101 gttgattttg gtgatattac atcagcatat gttgtaatgg ttaatacaaa attccaatat
     2161 acaaatagcg aaagcccaac acttgttcaa atggctactt tatcttcaac aggtaataaa
     2221 tccgtttcta ctggtaacgc tttaggattc actaataacc aaagtgccgg agctggtcaa
     2281 gaagtatata aaattggtaa ctacgtatgg gaagatacaa ataaaaacgg tattcaagaa
     2341 ttaggggaag ttggagtaaa aggtgtaaca gtggttgcat atgacaataa aactaataaa
     2401 gaagttggaa gaacaattac tgatgaaaaa ggtgggtatt tgattccaaa cttacctaat
     2461 ggagattacc gtgtagaatt ttcaaattta ccacaaggtt atgaagtaac cccttcaaaa
     2521 caaggtaata acgaagaatt agattcaaac ggtttatcat cagttattac agttaatggc
     2581 aaagataatt tatctgctga cttaggtatt tacaaaccta aatacaatct aggcgactat
     2641 gtatgggaag atacaaataa aaatggtatc caagatcaag atgaaaaagg tatatctggc
     2701 gtaacggtaa cattaaaaga tgaaaacggt aacgtgttaa aaacagttac aacagatgct
     2761 gatggcaaat ataaatttac tgatttagat aatggtaatt ataaagttga atttactaca
     2821 ccagaaggct atacaccgac tacagtaaca tctggtagcg atattgaaaa agactctaat
     2881 ggtttaacaa caacaggtgt tattaatggt gctgataaca tgacattaga tagtggattc
     2941 tacaaaacac caaaatataa tttaggtaat tatgtatggg aagatacaaa taaagatggt
     3001 aagcaggatt catctgaaaa aggtatttca ggcgtaacag ttacattgaa aaatgaaaac
     3061 ggtgaagttt tacaaacaac taaaacagat aaagatggta aatatcaatt tactggatta
     3121 gaaaatggaa cttataaagt tgaattcgaa acaccatcag gttacacacc aacacaagta
     3181 ggttcaggaa ctgatgaagg catagattca aatggtacat caacaacagg tgtcattaaa
     3241 gataaagata acgatactat tgactctggt ttctacaaac cgacttacaa cttaggtgac
     3301 tatgtatggg aagatacaaa taaaaacggt gttcaagata aagatgaaaa gggcatttca
     3361 ggtgtaacag ttacgttaaa agatgaaaac gacaaagttt taaaaacagt aacaacagat
     3421 gaaaatggta aatatcaatt cactgattta aacaatggaa cttataaagt tgaattcgag
     3481 acaccatcag gttacacacc aacttcagta acttctggaa atgatactga aaaagattct
     3541 aatggtttaa caacaacagg tgtcattaaa gatgcagata acatgacatt agacagtggt
     3601 ttctataaaa caccaaaata tagtttaggt gattatgttt ggtacgacag taataaagac
     3661 ggcaaacaag attcaactga aaaaggtatt aaagatgtta aagttacttt attaaa
//
LOCUS       DALMNS010000140         3649 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.140, whole genome shotgun sequence.
ACCESSION   DALMNS010000140 DALMNS010000000
VERSION     DALMNS010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3649)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3649)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3649
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.140"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            184..759
                     /locus_tag="O6Y56_002456"
     CDS             184..759
                     /locus_tag="O6Y56_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002486348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HDB5575691.1"
                     /translation="MAKYTKSRTWGMVVYPESAPENWQELLSETFMQFAVSPLHDKDI
                     NPDGEIKKPHWHVILIWDGPVTQNAAMKIAEKVNAPQPVKLESVRGAYRYFTHMDNPE
                     KYQYDEKDIKLFNGFDISSYVSLTKEEKYEAIGKIMDIINENGITEYIDLLNILRVND
                     YNLFKVACDNTILFTNVVRSLRHSEDKHKRF"
     gene            1290..1550
                     /gene="mobC"
                     /locus_tag="O6Y56_002457"
     CDS             1290..1550
                     /gene="mobC"
                     /locus_tag="O6Y56_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012209755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid mobilization relaxosome protein MobC"
                     /protein_id="HDB5575692.1"
                     /translation="MADTLNTTVPMLAKKATEKKRIKQPRIDRKGALEIAKELRSIGT
                     NINQLTRAVNTKDLIDYELGEALLNEFDDLRSEMNKLWQSLR"
     gene            1532..2641
                     /locus_tag="O6Y56_002458"
     CDS             1532..2641
                     /locus_tag="O6Y56_002458"
                     /inference="COORDINATES: protein motif:HMM:NF015397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HDB5575693.1"
                     /translation="MAVIKIGATKSMNRLISYAENKAEVQSGVNVDDEFAKEQMKTTR
                     MLFDKDDGRQGYHLIQSFDPEDNITPEQANDIGRELAEEVAPNHEITIYTHTDRNHIH
                     NHICINSVNMNDGKKFVNDRNKLYEMRRKNDELCRQHQLNVANSRQAQIRYTQAERAL
                     IEKGQISWKDEIRQAIDREKLNANSFDEFKDNMQENYGIEVKERGKNISFKHPDKKAF
                     VRGKTLGHDYEKGTIENECSRQSEQTKSTVQSNQSREIHGTDERPRGTDTHIEKRAND
                     VGNEYQPRDNSNTKSIGQSARPNRKGSRFNSKREREYRKAFKRNNERLADLNGRPDEQ
                     IPNGEQEIARDNQADIGGDREDSQLEIELDGPELQ"
     gene            2955..3146
                     /locus_tag="O6Y56_002459"
     CDS             2955..3146
                     /locus_tag="O6Y56_002459"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575694.1"
                     /translation="MRLINLKADRKKLIVEIKKLIEDLEELKDFHEMYDDEHTLQRII
                     EIQEEIDNIIYKVYGLKRI"
BASE COUNT         1368 a          526 c          756 g          999 t
ORIGIN      
        1 agttagaaaa agttaataaa aaatataaaa taaacaagtc tagtcagatt gaaacgttga
       61 ttactaaata cttaagaaag gagtatggtg atttaggata aaaaaaagaa ccttgcccca
      121 acaagattct tttgacgatg atgtcatgac ctgacatgtt ttgttaatca ccaatataat
      181 agcatggcta aatatactaa atcaagaaca tggggaatgg ttgtttaccc cgagtcagcg
      241 ccagaaaatt ggcaagaatt attatcagag actttcatgc aatttgcggt ttctccatta
      301 catgataaag atattaatcc agatggagag ataaaaaaac cacattggca tgtgatttta
      361 atatgggatg gtccagttac gcaaaatgca gctatgaaaa ttgctgaaaa agttaatgca
      421 cctcaacctg taaaattaga aagtgtaagg ggtgcttata gatatttcac acatatggat
      481 aatccagaga aatatcaata tgatgagaaa gatataaaac tttttaatgg tttcgatata
      541 tcatcgtatg tctcattgac caaagaggaa aaatatgagg ctattggaaa gattatggat
      601 atcattaatg aaaatgggat tactgaatat attgatttgt taaatatact tagagtaaat
      661 gattataatt tgtttaaggt tgcttgtgat aacacaattt tattcactaa tgttgttcgt
      721 tctttgagac attcagaaga taagcataag agattttgat tttatggaag tgtcattttg
      781 acacttcctt ttttgcgtaa gcaaaaacct gtttttgagt gaattaaatt ttatacacgt
      841 aagtggtcat aaaatttaag aacgaattgg cgaccatatt tttggtcgct tggttttgaa
      901 ctttgggact gatttattca gtcccttttt tgtgcttgcc acaaaaaaca gggggattgg
      961 ggagcgcccc aacaagtagg tgtatgggta ccatacacgt agcttgccaa agctctctca
     1021 tcaatgctat gatgaggccg taaagttgtt tatttaattg tttccgacaa ttaaataact
     1081 caacatacgg gcgtttttta gggtggcgca aatattaagc gccagactaa aaacatgata
     1141 gctttagggg gcaaatttga cggcacattt ttgccgtcgc cccctaaact tgatgaagag
     1201 aggtgcgatt tttggctacg gagaatagac gagaacgcaa gcagataaaa ttcagagtaa
     1261 ctgaacaaga gtatgagcga ttagtacaaa tggcagatac gctcaatacg acggttccaa
     1321 tgcttgcgaa aaaggctact gagaaaaagc gtatcaaaca accacgaatt gacagaaaag
     1381 gggcgcttga aattgcgaaa gaattgcgtt ccattggtac aaacattaat caacttacaa
     1441 gagcagtgaa tacaaaggat ttaattgatt atgaattagg agaggcacta cttaatgaat
     1501 ttgacgattt gagaagtgag atgaataagt tatggcagtc attaagatag gcgctacaaa
     1561 gtctatgaat aggcttatat cgtatgcaga gaataaagcc gaagtgcaat cgggtgtgaa
     1621 tgttgatgat gaatttgcta aagagcagat gaaaacaaca agaatgttat ttgataaaga
     1681 cgacggacga caaggttatc acttaataca atcatttgat ccagaagaca atatcacgcc
     1741 agaacaagcg aatgatatag gtcgagaatt agccgaagaa gtagcgccta atcatgaaat
     1801 cacgatttat acacatacgg atcgcaatca catacacaat catatttgta ttaatagcgt
     1861 aaatatgaat gacggtaaga aatttgtgaa tgatagaaat aagctttatg aaatgcgacg
     1921 caaaaatgat gaactatgta gacaacatca gttaaatgtt gcaaatagca gacaggcaca
     1981 aattcgatac acacaggcag aaagagccct tatagaaaaa ggtcaaatca gttggaaaga
     2041 tgaaattaga caagcaattg atagagaaaa gctaaatgca aatagctttg atgaatttaa
     2101 agataatatg caagaaaact acggtattga agttaaagaa cgtggaaaga atatcagttt
     2161 taaacatccc gataaaaaag catttgtaag aggtaaaacc ttaggacatg actatgagaa
     2221 ggggacgata gaaaatgagt gtagcagaca gagtgaacaa acaaaatcaa cagtacaatc
     2281 aaatcaatca agagaaattc atggaacaga tgaaagacct agaggcacag atacgcacat
     2341 tgagaaacga gccaatgatg ttggaaacga gtatcaacca agagataaca gcaatacaaa
     2401 aagcatcgga caaagtgcta gaccgaatcg aaaaggctca agattcaatt caaaaagaga
     2461 acgagaatac agaaaagcat ttaaaagaaa taatgagcgc cttgcagacc ttaatggaag
     2521 accagatgaa caaattccaa acggagaaca agaaattgct agagacaatc aagccgacat
     2581 tggaggagat agagaggact cacaactcga aattgaactc gatggaccag aacttcagta
     2641 atatgattgg gcatattcgc catacaaacg atgtaaatgc ccttaaaagc caattaatta
     2701 caattggggg ttcaagtatc ctaacgactg tatttgtcct tatattgcat tttatagggg
     2761 ttatatgagc catataagag attaagcacg ttttatgccg agaaaatcta tttgtcgatg
     2821 agagccctta attagactaa aagcgccagc ggtcggatag cgtcagctat caaatcgacc
     2881 gatggacagc tttaggatta ttaaggagcg cagaatcgtc gacaaataga ggaattggaa
     2941 taaacatatt aggagtgaga ctaattaatt taaaagcaga tagaaaaaaa ttaattgttg
     3001 aaataaaaaa gcttattgaa gacttagaag aattaaaaga ttttcatgaa atgtatgatg
     3061 atgagcatac attacaaaga attatagaga ttcaagaaga gatagataat attatatata
     3121 aagtttatgg cttgaaaaga atataaaaat aaagcactga tccaaattag accagtgctt
     3181 tattgatagc atattgcctc aactaacaga ggaatatagt gcatttgttt gttacgtttg
     3241 cgcactaacg ccaaacgaca gacaggcttg ttactagtta gttgaaacgc caaccttccg
     3301 taaacgtttc tagtgctatt cgttattaat ttttatatct gccatgaata gcttagccga
     3361 ttactacaat atgctattag tatgttataa catgatatga aatgttacgc caattttagt
     3421 aattttttta ggtttttagg ttagtgtttt ttgggggttg tttcacatat ttttggggtg
     3481 ttttcctagg ggggtactac gaccccccct aggagtgcat tgtgcattgt gaaaaaaaat
     3541 gagtatggat ttgactttgt gcgcataatt gtgtatattc gacacatgag gaaatttgga
     3601 ggtgttttaa aatattgagc gataaaaaac agagaaaaag attaaatat
//
LOCUS       DALMNS010000141         3628 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.141, whole genome shotgun sequence.
ACCESSION   DALMNS010000141 DALMNS010000000
VERSION     DALMNS010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3628
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.141"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..413)
                     /gene="deoC"
                     /locus_tag="O6Y56_002460"
     CDS             complement(<1..413)
                     /gene="deoC"
                     /locus_tag="O6Y56_002460"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HDB5575695.1"
                     /translation="MKFEKYIDHTLLKPESTRTQIDQIIDEAKAYNFKSVCVNPTHVK
                     YAAERLADSEVLVCTVIGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRF
                     DDVQQDIEAVVKAAKGHTVKVIIETVLLNHDEIVKA"
     gene            complement(494..1846)
                     /gene="tet(38)"
                     /locus_tag="O6Y56_002461"
     CDS             complement(494..1846)
                     /gene="tet(38)"
                     /locus_tag="O6Y56_002461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001100300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(38)"
                     /protein_id="HDB5575696.1"
                     /translation="MNVEYSKIKKAVPILLFLFVFSLVIDNSFKLISVAIADDLNISV
                     TTVSWQATLAGLVIGIGAVVYASLSDAISIRTLFIYGVILIIIGSIIGYIFQHQFALL
                     LVGRIIQTAGLAAAETLYVIYVAKYLSKEDQKTYLGLSTSSYSLSLVIGTLSGGFIST
                     YLHWTNMFLIALIVVFTLPFLFKLLPKENNTNKAHLDFVGLILVATIATTVMLFITNF
                     NWLYMIGALIAIIVFALYIKNAQRPLVNKSFFQNKRYASFLFIVFVMYAIQLGYIFTF
                     PFIMEQIYHLQLDTTSLLLVPGYIVAVIVGALSGKIGEYLNSKQAIITAIILIALSLI
                     LPAFAVGNHISIFVISMIFFAGSFALMYAPLLNEAIKTIDLNMTGVAIGFYNLIINVA
                     VSVGIAIAAALIDFKALNFPGNDALSSHFGIILIILGLMSIVGLVLFVILNRWTQSEK
                     "
     gene            complement(1853..2560)
                     /gene="deoD"
                     /locus_tag="O6Y56_002462"
     CDS             complement(1853..2560)
                     /gene="deoD"
                     /locus_tag="O6Y56_002462"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDB5575697.1"
                     /translation="MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNT
                     VRNMFGFTGTYKGKKVSVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENID
                     LYDVIIAQGASTDSNYVQQYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSD
                     IFYNADTTASERWMRMGILGVEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPE
                     ERERAFTDMIEIALSLV"
     gene            2796..3551
                     /locus_tag="O6Y56_002463"
     CDS             2796..3551
                     /locus_tag="O6Y56_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDB5575698.1"
                     /translation="MEVVYVTQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCAR
                     FDVSRMTLRQAIKLLAEDGIVESTRGKGHFVIPQTNAQHASSMDQFKHPLDQILLARV
                     SMSSINYRVDLESEYTNHLFANHPSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVID
                     TFKVNTQNEDDMKTFVEQTIYSNAYQSDLKMSITKAPHFKNHSHVFDGDTHCWLIIET
                     LYAQTPYPIMINKWYIPQEISELTLTRIRQSDY"
BASE COUNT         1238 a          662 c          566 g         1162 t
ORIGIN      
        1 gcttttacga tttcgtcatg gttcaacaat accgtctcaa taatcacttt tactgtgtga
       61 cctttcgcag ctttaaccac tgcttcaatg tcttgttgta catcatcaaa acgcccatct
      121 tttaatgcgc cgatgttgat gaccatgtca atttcatctg caccattttg aattgcatct
      181 tctgtttcaa atgctttcgt tgcagttgtc gacgcaccta atgggaaccc tattaccgta
      241 caaactagca cctctgaatc agctagtcgc tctgctgcat attttacatg cgttggattc
      301 acacatacag atttaaaatt gtatgctttc gcttcatcga tgatttgatc gatttgcgta
      361 cgtgttgact caggcttcaa taaagtgtga tctatatatt tctcaaattt catacttact
      421 actcctcgtg ttatataatc tctttattta attttactat aaatacgaat atatctcgcg
      481 aatttatatc tatttatttt tcagattgtg tccaacgatt taagatgacg aataaaacta
      541 atccgacaat actcattaaa cctaaaataa ttaaaataat accgaaatgt gaacttaatg
      601 catcattgcc tgggaaattt aatgctttaa aatcgattag agccgcagca atcgcaatac
      661 ctacagatac cgccacatta ataattaaat tataaaaacc aatagccaca cctgtcatat
      721 taagatctat tgttttaatg gcttcgttaa gtaaaggtgc atacattaaa gcaaagctac
      781 ctgcaaagaa tatcatagaa atgacgaaga ttgaaatgtg attacctact gcaaatgcag
      841 gtaaaatcaa gctcagtgcg attaaaataa ttgctgtgat aatcgcctgt tttgaattaa
      901 gatattcacc gattttacca cttagtgcac caacgataac tgctacaata taacccggta
      961 ctaatagcag tgatgttgtg tctagttgaa gatgataaat ttgttccatt atgaatggga
     1021 acgtaaaaat ataacccaat tggatggcat acattacaaa tactataaat aaaaatgaag
     1081 cataacgttt attttggaaa aatgatttgt ttactaatgg acgttgagca tttttaatat
     1141 atagcgcaaa aacgataatc gcaattaagg caccaatcat atataaccaa ttaaagttcg
     1201 taataaacag catgactgtt gtagcgatag ttgccactag aattaagcca acaaaatcta
     1261 aatgagcttt atttgtatta ttttcttttg gtaataattt aaataggaat ggcaacgtaa
     1321 atactacgat taatgcaatt aaaaacatat ttgtccagtg taaatacgta gaaataaatc
     1381 cacctgataa tgtaccgata actaatgaca aggaataact gctcgtactt aagccaaggt
     1441 aagtcttctg gtcctcttta gaaagatact ttgcaacata tatcacatat aatgtctctg
     1501 cagcagctaa acctgcagtt tgaataatac gtccaactaa aagtaatgcg aattgatgtt
     1561 ggaaaatgta accaataatt gatccgataa tgattaatat cacgccataa ataaatagtg
     1621 tgcgtatact aatggcatca gataatgaag cgtatactac agcgccaata ccaattacta
     1681 aaccggctaa tgtcgcttgc caacttactg tcgttacaga gatatttaag tcatcagcaa
     1741 tggctacaga aatcaattta aatgagttgt ctataaccaa actgaataca aataagaata
     1801 gtaaaatagg tactgctttc tttattttag aatattcaac attcataatc atctacacca
     1861 atgacagtgc aatttcaatc atatctgtaa atgcacgttc cctttcctca ggtgttgttg
     1921 acgtttcatg aattaaatga tcgctcactg tgaacacacc taatgcttcg acaccagcgt
     1981 aaattgcatt catgtataat gcagctgatt ccatttctac acctaaaata cccatacgca
     2041 tccaacgttc actcgctgtt gtatccgcgt tatagaaaat atcacttgat aacacattac
     2101 ctacatgatg acgtacacct ttgtcacgtg ctgtttcaac tgctttttct aataactgat
     2161 aagaagcaat tggcgcaaaa tgacctggta attgatattg ttgaacgtaa tttgaatcag
     2221 tagaggcacc ttgtgcaata atcacatcat ataaatcaat gttttcttgc atcgcgccac
     2281 aagaaccaac gcgaattaat tttttacaac caaatgtatg aattaattca taagagtaaa
     2341 tgccaataga tggcataccc attcctgaac ccatgacaga aactttttta cctttatatg
     2401 ttccggtaaa accaaacatg tttcgcactg tattgaactg ttccacatcg tccaaatatg
     2461 tttctgcaat gaacttagct cttaacggat ctcctggcaa tagaaccgtt tctgcaattt
     2521 cgacgtcatt cattggttta atgtgtggtg ttgatttcat aaaatattcc tcccaatatt
     2581 tgtatagtga tttgtctatt tgtctaacca tgtatataat aatatttttt aaaagcgctt
     2641 tcaagcatta cattttgaca atattaagaa cattttacag ttatagcttc taaccttgta
     2701 taaaactaat tttcaaagtc tatctatgtt taatttttat aatttttcca attcgagtaa
     2761 aaattattgt atgatgagag tgattaagta actttatgga ggttgtctac gtgacgcaaa
     2821 cacaaccaaa atttttaacg atttataata cgttatataa agaaattcaa ataggaaaat
     2881 atccgagtgg ccatgcatta cctactgaaa aggaactttg tgcgcgcttt gatgtcagtc
     2941 gtatgacttt gcgccaagct ataaaattgt tagccgaaga tggcatcgta gagagtacaa
     3001 gagggaaggg acactttgtt attccacaaa caaatgccca acacgcttca agtatggatc
     3061 aatttaagca tccacttgat caaatattgc tagctcgcgt atctatgtca tcaattaatt
     3121 atcgtgttga tttagaaagt gaatatacaa atcatttgtt tgcaaaccat ccttctgccg
     3181 tcattgcaat ggaacgctat tatcaaaaaa aggataatca ttctaagcaa gctgatgcat
     3241 tttgctttac ctttataccg ttaaatgtca ttgacacatt taaagtgaat acacaaaacg
     3301 aagacgacat gaagacgttc gttgagcaaa cgatttatag caatgcatat caatcagatt
     3361 taaaaatgtc tattaccaaa gcgccccact tcaaaaatca tagtcacgtg tttgatggtg
     3421 atacacattg ttggctgatt attgaaacat tgtacgcaca aacaccttat ccaattatga
     3481 ttaataagtg gtatattcca caggaaatct ctgaattaac actgacacgt ataagacaat
     3541 cggattatta aaattattga aatataagaa attttgtgat gattatttag gaagtgggca
     3601 agaaatggaa aagcttgtta caagcgca
//
LOCUS       DALMNS010000142         3605 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.142, whole genome shotgun sequence.
ACCESSION   DALMNS010000142 DALMNS010000000
VERSION     DALMNS010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3605)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3605)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3605
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.142"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            80..1618
                     /gene="putP"
                     /locus_tag="O6Y56_002464"
     CDS             80..1618
                     /gene="putP"
                     /locus_tag="O6Y56_002464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDB5575699.1"
                     /translation="MLTMGTALSQQVDANWQTYIMIAVYFLILIVIGFYGYKQATGNL
                     SEYMLGGRSIGPYITALSAGASDMSGWMIMGLPGSVYSTGLSAMWITIGLTLGAYINY
                     FVVAPRLRVYTELAGDAITLPDFFKNRLNDKNNVLKIISGLIIVVFFTLYTHSGFVSG
                     GKLFESAFGLDYHFGLILVAFIVIFYTFFGGYLAVSITDFFQGVIMLIAMVMVPIVAM
                     MNLNGWGTFHDVAAMKPTNLNLFKGLSFIGIISLFSWGLGYFGQPHIIVRFMSIKSHK
                     MLPKARRLGISWMAVGLLGAVAVGLTGIAFVPAYHIKLEDPETLFIVMSQVLFHPLVG
                     GFLLAAILAAIMSTISSQLLVTSSSLTEDFYKLIRGEEKAKTHQKEFVMIGRLSVLVV
                     AIVAIAIAWNPNDTILNLVGNAWAGFGASFSPLVLFALYWKGLTRAGAVCGMVSGALV
                     VIVWIAWIKPLAHINEIFGLYEIIPGFIVSVIVTYVVSKLTKKPGAFVETDLNKVRDI
                     VREK"
     gene            complement(1707..2906)
                     /locus_tag="O6Y56_002465"
     CDS             complement(1707..2906)
                     /locus_tag="O6Y56_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CamS family sex pheromone protein"
                     /protein_id="HDB5575700.1"
                     /translation="MKRTLVLLITAIFILAACGNHKDDQAGKDNQKHNNSSNQVKEIA
                     TDKNVQGDNYRTLLPFKESQARGLLQDNMANSYNGGDFEDGLLNLSKEVFPTDKYLYQ
                     DGQFLDKKTINAYLNPKYTKREIDKMSEKDKKDKKANENLGLNPSHEGETDPEKIAEK
                     SPAYLSNILEQDFYGGGDTKGKNIKGMTIGLAMNSVYYYKKEKDGPTFSKKLDDSEVK
                     KQGKQMASEILSRLRENDDLKDIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKLNE
                     WHNINEKSALLPSSTAADYDENLNNNFKQFNDNLQSYFSNFTQAVGKVKFVDKKPQRL
                     VVDLPIDYYGQAETIGITQYVTEQANKYFDKIDNYEIRIKDGNQPRALISKTKDDKEP
                     QVHIYSN"
     gene            complement(2919..>3605)
                     /gene="ligA"
                     /locus_tag="O6Y56_002466"
     CDS             complement(2919..>3605)
                     /gene="ligA"
                     /locus_tag="O6Y56_002466"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500613.1"
                     /note="this protein catalyzes the formation of
                     phosphodiester linkages between 5'-phosphoryl and
                     3'-hydroxyl groups in double-stranded DNA using NAD as a
                     coenzyme and as the energy source for the reaction;
                     essential for DNA replication and repair of damaged DNA;
                     similar to ligase LigB; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDB5575701.1"
                     /translation="AMNIDGLGTKIIQQLYQSELIKDVADIFYLTEEDLLPLDRMGQK
                     KVDNLLAAIQQAKDNSLENLLFGLGIRHLGVKASQVLAEKYETIDRLLTVTEAELVEI
                     HDIGDKVAQSVVTYLENEDIRALIQKLKDKHVNMIYKGIKTSDIEGHPEFSGKTIVLT
                     GKLHQMTRNEASKWLASQGAKVTSSVTKNTDVVIAGEDAGSKLTKAQSLGIEIWTEQQ
                     FVDKQNELNS"
BASE COUNT         1029 a          601 c          577 g         1398 t
ORIGIN      
        1 ctacttttct aaacatttat ctttatgtat aatgttttca agtaactaaa ttataaatta
       61 aataaaggga gtgtttatca tgcttacaat ggggacagca ttaagtcaac aagtagatgc
      121 caattggcaa acttatatta tgattgccgt ctatttcttg atactaatcg ttattggctt
      181 ttacggttac aagcaagcaa ctggtaacct aagcgagtac atgttaggtg gacgtagtat
      241 tggaccgtat attactgcat tatcagctgg agcttcagat atgagtggat ggatgattat
      301 ggggctacct ggttctgtct atagcactgg tctatcagct atgtggatta caatcggttt
      361 aacattaggt gcttatataa attactttgt tgttgctcct agacttcgtg tttataccga
      421 attagctgga gatgcaatta cattaccaga tttctttaaa aatcgtttaa acgataaaaa
      481 taatgtgtta aagattattt ctggattgat tatcgtagta ttctttacat tatatacaca
      541 ttctggtttc gtatctggtg gtaaattatt tgaaagtgct tttggattag attatcattt
      601 cggtttaata ttagttgctt tcattgtcat tttctatact ttctttggtg gatatttagc
      661 tgtatcaatt acagatttct tccaaggtgt cattatgtta attgcgatgg ttatggtccc
      721 tattgttgct atgatgaatt taaacggctg gggaacgttt catgatgtag cagctatgaa
      781 acctacaaat ttaaatttat ttaaagggtt atcatttata ggaattatct ctctattttc
      841 atggggatta ggttatttcg gtcaacctca tatcattgta aggtttatgt ctattaaatc
      901 acacaagatg ctacctaaag ctagacgttt aggtattagc tggatggctg ttggtttatt
      961 aggcgctgtg gctgttggtt taacaggtat tgcattcgta cctgcttatc atattaaact
     1021 agaagatcct gagacattat tcatcgtgat gagtcaagta ctcttccatc ctcttgtagg
     1081 tggtttctta cttgctgcga tactagctgc aattatgagt acgatttctt cacaattact
     1141 tgtaacatct agttcattaa cggaagactt ttataaatta attcgtggtg aagaaaaagc
     1201 taaaacgcac caaaaagaat ttgttatgat tggaagatta tctgtattag ttgtagcaat
     1261 tgttgccatc gcgattgcat ggaatccaaa cgacacaatt ctaaacttag taggtaatgc
     1321 ttgggccgga tttggtgcat cgttcagtcc acttgtgctg tttgcacttt actggaaagg
     1381 tttgacacgt gccggtgctg tatgtggaat ggtttcaggt gccttagtcg ttatcgtttg
     1441 gattgcgtgg attaaaccat tggcacatat caacgaaata ttcggcttat atgaaattat
     1501 tcctggattt attgtaagtg taatcgttac atatgttgta agtaaactta ctaaaaaacc
     1561 tggtgcattt gttgaaactg acttaaacaa agtccgcgac atcgttagag aaaaataatt
     1621 cataagtctt aacaaattaa aaaggtacta atgttaatca aaattctgac taacattggt
     1681 acctttttat tatctttaat ttacaattaa ttactgtaaa tatgaacttg cggttcttta
     1741 tcatcttttg tcttactaat taaagcgcgt ggttggttac catctttaat acgaatttca
     1801 tagttatcga ttttatcgaa atatttattc gcttgttcag taacgtactg tgtaatacca
     1861 attgtttcag cttgtccata gtaatcgatt ggtaaatcta ctactaatcg ttgtggcttt
     1921 ttatcaacaa atttaacttt ccctactgct tgtgtgaaat tagaaaaata tgattgcaaa
     1981 ttatcattaa attgcttgaa attattattt aaattttcat cataatctgc tgctgttgaa
     2041 gaaggtaata aagctgattt ttcattgata ttatgccatt cattaagctt tgtttgactc
     2101 ttttctgcag tcgcttgagt gataaattca cctggtgtga ttgaatcttc acttgattgc
     2161 ttataaattg caaaatgaat tggtatatct tttaaatcat cattttcacg taaccttgat
     2221 agtatctcac tagccatttg tttaccttgc tttttaactt cgctatcatc tagtttttta
     2281 ctaaaagtcg gtccatcttt ttctttttta tagtaataaa cactattcat agctaaacca
     2341 atcgtcatac ctttaatatt cttacctttt gtatctccac caccataaaa atcttgttct
     2401 aaaatgttag ataaataggc tggtgatttt tctgcaatct tttcaggatc tgtttcacct
     2461 tcgtgtgatg gattaagtcc taaattttca ttcgctttct tgtctttttt atctttttca
     2521 gacattttat cgatttcacg ttttgtatac ttaggattta aataggcatt aattgttttc
     2581 ttatccaaaa attgaccatc ttgatacaaa tatttgtctg ttggaaacac ttctttactt
     2641 aagttcaata aaccatcttc aaagtcgccg ccattataac tatttgccat gttatcttgt
     2701 aaaagtcctc ttgcctggct ttctttaaat ggtaacaatg tgcgatagtt atcaccttgt
     2761 acatttttat ccgtagcaat ttcttttact tgatttgaac tattgttatg tttttgatta
     2821 tcttttccag cctggtcatc cttatggtta ccacaagcag cgagtataaa gatagctgta
     2881 atcaataata ctaatgtacg cttcatcgac atacccctct aactatttaa ttcattttgc
     2941 ttatctacaa attgttgctc tgtccaaatt tcaataccta aactttgtgc ttttgttaat
     3001 tttgaacctg catcttcacc agcaataacg acatctgtat ttttagtaac gctacttgta
     3061 actttagcac cttgtgatgc aagccattta gatgcttcat tgcgtgtcat ttgatgtagc
     3121 ttaccagtta gtactatcgt tttaccacta aattcaggat gtccttcaat atctgatgtt
     3181 ttgatacctt tataaatcat attaacatgt ttatctttta atttttgaat taaagcacga
     3241 atatcttcat tttctaagta agtaactaca gattgtgcta ctttatcgcc tatatcatga
     3301 atttctacta attccgcttc agttaccgtt agtaatcgat ctatcgtttc atatttttct
     3361 gctaacactt ggctcgcttt aacacctaaa tgcctaatac ctaaaccaaa taataaattt
     3421 tctaaagagt tgtccttagc ttgttgaatg gcagctaata aattatcaac ttttttctgc
     3481 cccattctat ccaatggtaa taaatcttct tctgttaaat agaaaatatc agcaacatct
     3541 ttaattaatt cgctttgata aagctgttga ataattttag tgcctaaacc atcaatattc
     3601 atggc
//
LOCUS       DALMNS010000143         3565 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.143, whole genome shotgun sequence.
ACCESSION   DALMNS010000143 DALMNS010000000
VERSION     DALMNS010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3565
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.143"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            210..926
                     /locus_tag="O6Y56_002467"
     CDS             210..926
                     /locus_tag="O6Y56_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDB5575702.1"
                     /translation="MGRKWNNIKEKKAQKDKNTSRIYAKFGKEIYVAAKSGEPNPESN
                     QALRLVLERAKTYSVPNHIIEKAIDKAKGAGDENFDHLRYEGFGPSGSMLIVDALTNN
                     VNRTASDVRAAFGKNGGNMGVSGSVAYMFDHVATFGIEGKSVDEILETLMEQDVDVND
                     VIDDNGLTIVYAEPDQFAVVQDALRAAGVEEFKVAEFEMLPQTDIELSEADQVTFEKL
                     IDALEDLEDVQNVFHNVDLK"
     gene            926..1399
                     /locus_tag="O6Y56_002468"
     CDS             926..1399
                     /locus_tag="O6Y56_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDB5575703.1"
                     /translation="MKSAEQWIDELQLESHPEGGFYRETIREVLKDGRRAPFSSIYFL
                     LTDDNISHFHRIDADEVWYYHAGDSLTIHMINLDGEYTTATLGTDIQNGDVLQYVVPK
                     GTIFASSIEISNTYSLVGCMCQPAFEFKQFELFKQSELITQYPHLKSVIEKYALK"
     gene            1491..1607
                     /locus_tag="O6Y56_002469"
     CDS             1491..1607
                     /locus_tag="O6Y56_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575704.1"
                     /translation="MLQLFLMKLTLNDFENDKTILFIILKNHCYEEVCVLSN"
     gene            1752..2396
                     /locus_tag="O6Y56_002470"
     CDS             1752..2396
                     /locus_tag="O6Y56_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000865621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF402 domain-containing protein"
                     /protein_id="HDB5575705.1"
                     /translation="MKVKYIDKRHWRRLIDREYTEVKVNNNRFKGIIGLVTMKKVRDP
                     LEVTVVGQNIIVADDNYKWLQILPEKKRYSITVMFDNKGNPLEYYFDINIKNITQKGN
                     ARTVDLCLDVLALPSGEYELVDEDDLMFALESEQITKKQFHEAYMIAHQIMAELENDF
                     KGFQKKIMYCFNKINAKAQKNHQKPQNKTNFEKSKQIKPKQYNQTKNHQQQKKK"
     gene            2512..3378
                     /locus_tag="O6Y56_002471"
     CDS             2512..3378
                     /locus_tag="O6Y56_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDB5575706.1"
                     /translation="MKIEDYRLLITLDETKTLRKAAEILYISQPAVTQRLKAIENAFG
                     VDIFIRTKKQLITTTEGTMIIEHARDMLKRERLFFDKMQAHIGEVNGTISIGCSSLIG
                     QTLLPEVLSLYNAQFPNVEIQVQVGSTEQIKANHRDYHVMITRGNKVMNLANTHLFND
                     DHYFIFPKNRRDDVTKLPFIEFQADPIYINQIKQWYNDNLEQDYHATITVDQVATCKE
                     MLISGVGVTILPEIMMKNISKEQFEFEKVEIDNEPLIRSTFMSYDPSMLQLPQVDSFV
                     NLMASFVEQPKA"
BASE COUNT         1355 a          455 c          663 g         1092 t
ORIGIN      
        1 aacaattttt aaatatttaa ttgaaattga gtgtcgaaag catagaaatt gcttatcggc
       61 acatttttta tatatacata ttttaaaact aagtaacaga ttgaagaaat cgtaattcaa
      121 taatgttaat tgtgaaaatg tatataatca taaaaaaatc atgtataata tatgttgtta
      181 attaaacagt tcgaaagcga gatgacatta tgggacgtaa atggaataac attaaagaaa
      241 aaaaggccca aaaagataaa aacacaagta gaatatatgc gaaatttggt aaggagattt
      301 atgttgcagc aaaatctggt gaacccaatc cagaatctaa ccaagcttta aggttggtgc
      361 ttgaacgcgc taagacatat tcagtgccga atcatattat tgaaaaagca atagataaag
      421 ctaagggtgc tggagacgaa aactttgatc acctaagata tgaaggattt ggacctagcg
      481 gatcaatgct aattgttgat gcgttaacaa acaatgtaaa tcgtactgca tctgatgtgc
      541 gtgctgcttt tggtaaaaac ggcggtaata tgggtgtatc tggatcagtt gcttatatgt
      601 ttgaccatgt ggcaacattt ggtattgaag gaaagtctgt tgacgaaata cttgaaacat
      661 taatggaaca agatgtagat gtaaatgatg tgattgacga taatggattg acaatagtct
      721 atgctgaacc agatcaattt gcagtcgttc aagatgcgct tcgtgcagca ggtgttgaag
      781 aatttaaagt tgctgaattt gaaatgttac ctcaaacaga tattgaactt tctgaagcgg
      841 accaagtaac atttgaaaaa ttaatcgatg cattagaaga tttagaagat gtacaaaacg
      901 tattccataa tgtggatttg aaataatgaa atcagcagaa caatggattg atgaattgca
      961 acttgaatca catcctgaag gtggtttcta tagagagaca atccgagaag tattgaaaga
     1021 tggacgcaga gcgccgttta gtagtattta ttttttactt acagatgaca atatttcgca
     1081 ttttcatcga attgatgctg atgaagtatg gtactatcat gctggtgatt ctctaacaat
     1141 tcatatgata aatctggatg gggaatatac gactgcaaca ttgggtactg atatccaaaa
     1201 tggagatgta ttgcaatatg tagtgcctaa aggaacaatt tttgcttctt caatcgaaat
     1261 ttcaaatact tatagtttag taggttgtat gtgtcaaccg gcatttgagt ttaagcagtt
     1321 tgaattgttt aagcaatctg aattaattac acaatatccg catcttaaat cagtgattga
     1381 aaaatatgct ttaaaataaa aatgatcaat gaagtggttt gaaggttgtt aataaacctt
     1441 tgagtcactt catttttgta tgtattcttg attgaatcag aatagaattg atgctacagc
     1501 tttttctaat gaaattaaca ttaaatgatt ttgaaaacga taagaccata ttatttataa
     1561 ttttgaaaaa tcattgttat gaagaagtat gtgtactatc taattaatat tgtctatttt
     1621 aagtaaattg aagcgagttg tagtaaaata ataataaata ttttcatatg attaacaaaa
     1681 actataaaac tgtatcatga catgacatca ttcatgtagt tttatataat aatgacaagg
     1741 agttggtgac tgtgaaagta aagtatatag ataaacgtca ctggcgtcgc ctaattgata
     1801 gggaatacac agaggtaaaa gttaataata ataggttcaa gggtattata ggcttagtca
     1861 cgatgaaaaa ggttcgtgat cctttagagg tgacggtagt tggacaaaat attattgtcg
     1921 cagatgacaa ttataaatgg ttgcaaatac tacctgaaaa gaaacgttat agtataactg
     1981 taatgtttga taataaaggc aatccattag aatattattt tgatataaat atcaaaaata
     2041 taacgcaaaa aggtaatgca cgtacagtag atttatgttt agatgtttta gcattaccaa
     2101 gtggtgaata tgagttagta gatgaagatg atttaatgtt tgcattagaa agtgagcaaa
     2161 ttacaaaaaa gcaatttcat gaagcatata tgattgcgca tcaaattatg gcagagttag
     2221 aaaatgattt taaaggattc caaaagaaaa tcatgtactg ctttaataaa attaatgcaa
     2281 aggctcaaaa aaatcatcaa aagccacaaa ataaaactaa ttttgaaaaa agcaaacaaa
     2341 taaaacctaa gcaatataat caaactaaaa atcaccaaca acaaaagaaa aaataagtaa
     2401 ttcaagctgc agccatacca ataaaattgg tgaaattatt cgttagtaat gaactcttga
     2461 atgctcgtag tcatgaaagt tcaataattg aataatttat ggggggaaat tatgaagatt
     2521 gaagactatc gtttactaat aacattagac gaaacgaaaa cgttacgtaa agcggctgaa
     2581 attttatata tatctcaacc tgctgttaca caaagactaa aagctattga aaatgctttt
     2641 ggagtagata tttttatcag aacaaaaaaa caattgatta caacaactga aggaacaatg
     2701 attattgagc atgcccgtga catgttgaaa agagagcgat tattttttga caaaatgcag
     2761 gcacatattg gtgaagtgaa tggaacaata tcaatagggt gttcttcatt gattggacaa
     2821 accttacttc ctgaagtttt gagcctatat aatgcccaat ttcctaatgt tgaaattcaa
     2881 gtacaagttg gttcaactga acaaattaaa gcaaaccata gagactatca tgttatgata
     2941 actcgtggaa ataaggtaat gaatttagct aacacacatt tatttaatga tgatcattat
     3001 tttatttttc caaaaaatag acgagacgat gttacaaagt tgccattcat agagtttcaa
     3061 gctgacccga tttatataaa tcaaataaag caatggtata acgataattt agagcaagat
     3121 tatcatgcaa ctattacagt ggatcaagtg gcaacttgta aagaaatgtt gattagtggt
     3181 gtaggtgtta caatcttgcc agaaattatg atgaaaaata tcagcaaaga acaatttgag
     3241 tttgaaaaag tagaaattga taatgaaccg ctgattcgtt caacgtttat gagttatgat
     3301 ccgagtatgt tgcaattgcc acaagttgat tcttttgtaa atcttatggc gagctttgtt
     3361 gaacaaccaa aggcgtagtc ttagactaat ttaaggtgtt agtatttaat tttaaactat
     3421 tcggttaaat tgaacgcagt tagttgctaa tgcaccaact gcataagagc ccctaattaa
     3481 taaattaaaa gggaacgaag aaatacagtt ggttgctaac gcaccaactg cataagagcc
     3541 cctaattaat aaattaaaag gggac
//
LOCUS       DALMNS010000144         3505 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.144, whole genome shotgun sequence.
ACCESSION   DALMNS010000144 DALMNS010000000
VERSION     DALMNS010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3505
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.144"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..977
                     /locus_tag="O6Y56_002472"
     CDS             <1..977
                     /locus_tag="O6Y56_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498811.1"
                     /note="with GatAB forms a phosphoenolpyruvate-dependent
                     sugar phosphotransferase transporter for galactitol;
                     subunit IIC forms the translocation channel and contains
                     the substrate binding site; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HDB5575707.1"
                     /translation="SVAAFIIPLGIIVNVVLLVTKVTKTMNVDIWNFWHYTFTAAMVY
                     AVSGSIWQALLAAVIFQVICLKVADWTAPMMSEFFDLPGVSIATGSTISYAPGIYLVK
                     LLQRVPGLNKLDADPETIQKRFGAFGESIFVGLILGLGIGVLAGYKPGDIINLGMSMA
                     AVMVLMPRMVKILMEGLMPVSESARTWLNKRFGEREIYIGLDAAVALGHPAVISTALI
                     LVPITVLLAVILPGNQVLPFGDLATIPFVVAFIVGAARGNIIHSVIVGTIMIAISLYI
                     ATDVAPIFTDMAKGTNVQMPKGSSEISSIDQGGNIVNYLIFKLFSLFN"
     gene            995..2050
                     /locus_tag="O6Y56_002473"
     CDS             995..2050
                     /locus_tag="O6Y56_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HDB5575708.1"
                     /translation="MKALVKTREGHGNLELLDKEVATPLDDKVKIKVHYAGICGTDIH
                     TYEGHYKVNFPVTLGHEFSGEIVEVGADVKDFKVGDRVTSETTFYVCNECEYCESKDY
                     NLCNYRKGIGTQVDGAFTNYVIAREESLHHIPDEVSYQSAAMTEPLACAHHGVSKIQV
                     NSGDVAVVMGPGPIGLLVAQVLKSKGAIVVVTGLDNDKVRLDKAEALHMDYVVNLQQT
                     DLKTYINGITDGYGADVVVECSGAVPAARQGLDILRKKGFYSQIGIFKDAEIPFDMEK
                     VIQKEITVVGSRSQKPADWEPSLQLMADGLVNAEALVTKIYDISKWDEAYQHLKSGEG
                     IKALLKPLDLDENEGEN"
     gene            2052..2198
                     /locus_tag="O6Y56_002474"
     CDS             2052..2198
                     /locus_tag="O6Y56_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575709.1"
                     /translation="MVESMLTFMLGPLRQITDFYMEHLLVSNSIVIAGYFATGIFKKK
                     KVVN"
     gene            2222..3265
                     /locus_tag="O6Y56_002475"
     CDS             2222..3265
                     /locus_tag="O6Y56_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HDB5575710.1"
                     /translation="MKALKLYGVEDLRYEDNDKPVIESANDVIVKVRATGICGSDTSR
                     YKKMGPYIKGMPFGHEFSGVVDAIGSDVTHVNVGDKVTGCPAIPCYQCEYCLKGEYAR
                     CEKLFVIGSYEPGSFAEYVKLPAQNVLKVPDNVDYIEAAMVEPSAVVAHGFYKSNIQP
                     GMTVAVMGCGSIGLLAIQWARIFGAAHIIAIDIDAHKLDIAKSLGAHQTINSKEENLE
                     KFIENHYANQIDLAIESSGAKVTIGQILTLPKKGGEVVLLGIPYDDIEIDRVHFEKIL
                     RNELTICGSWNCLSSNFPGKEWTATLHYMKTKDINVKLIISHFLPLEKGPETFDKLVN
                     KKERFDKVMFTIY"
BASE COUNT         1142 a          509 c          768 g         1086 t
ORIGIN      
        1 catctgtcgc agcatttata attccactcg gaatcatagt taacgttgta ttgctagtaa
       61 ctaaagtgac aaagacgatg aatgtagata tttggaattt ttggcattat acgtttacag
      121 cagcaatggt ttatgccgta tcaggcagta tttggcaagc gttattagca gcagttattt
      181 tccaagttat ctgtttgaaa gtagcagatt ggacagcacc gatgatgagt gagttctttg
      241 atttaccagg tgtatcgatt gctacaggaa gtacaatttc ttatgcacca ggtatttact
      301 tagttaaatt gttacaaaga gtacccggtc tgaataagtt agatgctgat cctgaaacaa
      361 ttcaaaaacg ttttggcgca tttggagagt ctatctttgt cggattaatt ttaggtttag
      421 gtattggtgt gttagcaggt tacaaacctg gagacatcat taatttagga atgtcaatgg
      481 ctgcagtaat ggtattaatg cctagaatgg taaaaatctt aatggaaggt ttaatgccag
      541 tttcagagtc tgcaagaaca tggctaaata aacgttttgg cgaacgtgaa atttatattg
      601 gattggatgc ggctgtagct ttaggtcatc cagcggttat ttcgacagca ttaattttag
      661 tacctatcac tgttttatta gccgttattt taccaggaaa ccaagtacta ccttttggtg
      721 acttagcaac tataccattt gttgtcgcgt ttattgttgg tgcagcaaga ggaaacatta
      781 ttcattctgt cattgtgggt acgattatga ttgcaatttc actatatatt gcaacagacg
      841 tagcacctat tttcacagat atggcgaaag gtacgaatgt acaaatgcca aaaggttcat
      901 ctgaaatttc aagtattgat caaggtggta atatcgttaa ctatcttatc tttaaactat
      961 ttagtctatt caattaaaaa tcgaggtgtt tgtggtgaaa gctttagtaa aaacaagaga
     1021 aggacatggc aacttagaac ttcttgataa agaagttgca acaccgctag atgataaagt
     1081 aaagattaaa gtacattatg caggaatttg tggcacagat attcatactt atgaaggtca
     1141 ttataaagtt aattttccag tgacattagg tcatgaattt tctggtgaaa tcgttgaagt
     1201 tggagcagac gttaaagatt ttaaagttgg tgaccgtgtc acttctgaaa cgacattcta
     1261 tgtttgtaat gagtgtgaat actgtgaatc aaaagactat aatttatgca actatcgaaa
     1321 aggtattgga acacaagttg atggcgcatt tactaattat gtcattgcac gtgaagaaag
     1381 tttgcatcat attccagatg aagtatcgta ccagtctgca gctatgacag aaccattagc
     1441 atgtgcacat catggcgttt ctaagattca agtgaactct ggcgatgtag cagttgtaat
     1501 gggacctggg ccaatcggat tacttgtagc acaagtgtta aaaagtaaag gcgcaattgt
     1561 tgtggtaaca ggattggaca atgacaaagt cagattagat aaagcagaag cattgcacat
     1621 ggattatgta gtcaatttac aacaaacaga cttaaaaacg tatatcaatg gaattacaga
     1681 cggttacggt gcagatgttg ttgttgaatg ttcaggtgca gttccagcag cacgacaagg
     1741 tttggatatt ttacgcaaaa aaggtttcta cagtcaaata ggtattttta aggatgctga
     1801 aattccattt gatatggaaa aagtgattca aaaagaaata acagttgttg gtagtagaag
     1861 tcaaaagcca gcagattggg aaccttcatt gcaacttatg gcggatggtt tagtaaatgc
     1921 tgaagctctg gtgacaaaaa tatatgatat ttcgaaatgg gacgaggcgt atcaacattt
     1981 aaaatctggc gaaggtatta aagcattact taagccgctc gatttagatg aaaatgaagg
     2041 agagaattaa tatggtagaa tcaatgctaa cttttatgct tgggccattg agacaaatca
     2101 ctgattttta tatggaacat ttactcgtaa gtaattctat cgtcattgca ggttattttg
     2161 cgacaggtat ttttaaaaag aaaaaagttg tgaattaaat cagagttgag gtgatttaca
     2221 agtgaaagct ttgaaattat atggcgtgga agatttacgg tatgaggata atgataagcc
     2281 agtcattgaa agtgcgaatg acgttattgt taaagtgcgc gcaacgggta tatgtggttc
     2341 agacacgtca cgatacaaaa aaatggggcc atacattaaa ggtatgccat ttggtcatga
     2401 attttcaggt gttgtagatg ccattggaag tgatgttacg catgttaatg taggcgacaa
     2461 agtgacaggt tgcccagcaa taccttgtta tcaatgcgag tattgtttaa aaggtgaata
     2521 tgcgcgatgt gaaaagttat tcgtcattgg ctcatatgaa cctggatcgt tcgcggaata
     2581 tgtcaaattg ccagcacaaa atgttttaaa ggttccagac aatgttgatt acattgaagc
     2641 agcaatggtt gaaccatcag ccgttgttgc acatgggttt tataaatcga atatacaacc
     2701 tggtatgact gttgcagtaa tggggtgtgg cagcatagga ttgttagcta ttcaatgggc
     2761 acgaatattt ggtgctgcac atatcatcgc tatagatata gatgcgcata aactagatat
     2821 tgcaaaatca ttgggcgcac atcaaacaat caattcaaaa gaagaaaacc ttgagaaatt
     2881 catcgaaaat cattacgcca atcaaatcga tttagctata gaatcatcag gtgctaaagt
     2941 tacgattggt caaatattga cgctaccgaa aaaaggtggc gaggtggtat tactcggaat
     3001 accatatgat gatattgaga ttgatcgcgt tcattttgaa aaaattctgc gtaacgagtt
     3061 gacaatatgt ggctcttgga actgtttgtc cagtaatttt ccggggaaag agtggacggc
     3121 aaccttacat tatatgaaga cgaaagatat taatgtaaag cttattattt ctcatttttt
     3181 accgttagaa aaaggcccgg agacatttga taaattagtt aacaagaaag aacgatttga
     3241 taaagtcatg tttacgattt attagcatgc acctttgagg acgaaaacgc tggtatagtt
     3301 atagctatga aagtgcgaat gccgtctggt ctacagatac tatcgaaata attcatcttc
     3361 gaatatacgt tgctaaataa ccggtttact tgtgtgaaat atgcttgtga atcggttgtt
     3421 ttgcattttg tatacttaaa ataagatggc aatatttgat aatttttaga gtgaaaatca
     3481 agtacagcca cttaataaga taaat
//
LOCUS       DALMNS010000145         3408 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.145, whole genome shotgun sequence.
ACCESSION   DALMNS010000145 DALMNS010000000
VERSION     DALMNS010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3408)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3408)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3408
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.145"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            20..1510
                     /locus_tag="O6Y56_002476"
     CDS             20..1510
                     /locus_tag="O6Y56_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDB5575711.1"
                     /translation="MNYFVGNSLGVNLTGIEKAIINRLNLFKEMGRPAQCVFLSWNRY
                     LYRNAQNYITSSDYINMYDFFQEATYLERNEPFDWLSYWTDECHYTLKHVENSHDFRI
                     YDQERFLMYAHFQDPKYRILDYVNHFDSQRRKVKRDFYDVRGFLSCSRILVDKQQTLC
                     EFFYNPEGDTKLEKYFSYKDGKPEVQKIIVYYANKQYFFNNETELGAFFIKQLYQHGD
                     LFFSDRNVYTAPIFNLTPESIPVVAVLHSTHIKNIDALDSSPFKNVYKAMFENLSRYR
                     AIIVSTEQQKLDVEKRINHTIPVVNIPVGYSETIDTPVQTLDQRSVKLISIARYSPEK
                     QLHQQIELIKRLVSYVPKIELHMYGFGSESKKLNELIQKYGLENHVYLRGFLSNLDQE
                     YSDAYLSLITSNMEGFSLALLESLAHGVPVISYDIKYGPNELITPDFNGYLITKNDED
                     ALFDKVKYVIDHPEVQQRLSKGSLAKAQQYSKASLIKQWDQFVRLI"
     gene            complement(1634..3106)
                     /locus_tag="O6Y56_002477"
     CDS             complement(1634..3106)
                     /locus_tag="O6Y56_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDB5575712.1"
                     /translation="MNYILGTILESKITGVEKAQINRLKLFKQHGISSKCVYVKWNPY
                     SYTYAKQHQIENDLFTMYDYFQKAINYKKTKQVNWIQYWEKSCRYTLKFVENSNDVRI
                     YDEEQFIMYAHFLDKQYHQLNYVNYFDHKRRKVKRELYDGRGFLSCSRILGEGQRIVL
                     ENYYTPNGEIVIQKYFDDIKGKNTLTKITLNEGQHQQFFDTEDELVQYFLHQLCKNND
                     QIILDRPHELGNVIAGLNQSIPVIVVLHSTHLSGTGNGIKSFYKTVFNNLTRYKAIVV
                     STEKQCQDISQYIENKIPVINIPVGYVANLKYQFDINQKEKNHIISIARLVENKQIKH
                     QIEVIKQLVTKHPNIQLNIYGHGNGLSEYRQLVEDYHLSEHVKFHGFKTHINEEIAKA
                     ELMLSTSKMEGFGLAILESLSVGTPVISYDVDYGPSELIQDGFNGYLVPQGDINQMVE
                     KVDQLLNNSQMMQQFSINSIEYAQQFNETNVSIKWQNILN"
     gene            complement(3225..>3408)
                     /locus_tag="O6Y56_002478"
     CDS             complement(3225..>3408)
                     /locus_tag="O6Y56_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HDB5575713.1"
                     /translation="AGKHTPVKPMSATKDHHNKAKALPETGSENNGSNNATLFGGLFA
                     ALGSLLLFGRRKKQNK"
BASE COUNT         1107 a          527 c          510 g         1264 t
ORIGIN      
        1 gatataagtg gtgttgtaaa tgaattattt tgtaggtaat agtttaggtg ttaatttaac
       61 tgggatagag aaagcaatta ttaatcgttt aaatttattt aaagaaatgg gaagaccagc
      121 gcaatgtgta tttctgtcat ggaatagata tttatataga aatgcccaaa attatattac
      181 tagttctgac tatattaata tgtatgattt cttccaagaa gcaacatatt tagaacgcaa
      241 tgaaccattt gactggttgt catattggac tgatgaatgt cattatactt taaaacatgt
      301 tgaaaatagt catgacttta gaatatatga tcaagagcgt ttcttaatgt atgcccattt
      361 tcaagatcct aaatatcgta tattagatta tgtgaatcat tttgatagtc aaagacgaaa
      421 agtaaaacgt gatttttatg atgtacgtgg ctttttaagt tgtagtagga tccttgttga
      481 taaacaacaa acattatgtg aatttttcta taatccagaa ggtgacacaa aattagaaaa
      541 gtatttttct tacaaagatg gcaaaccaga agtacaaaaa attattgttt actatgctaa
      601 caaacaatat ttctttaata atgaaacgga attaggcgca tttttcatta aacaactata
      661 tcaacatggg gatttatttt tcagtgaccg taatgtgtat acagcaccta ttttcaactt
      721 aacacctgag tcaatcccag tagtagctgt gcttcacagt acacacatta aaaatattga
      781 tgcattagat tcatcgccat ttaaaaatgt atataaagcg atgtttgaaa atttatctcg
      841 atatcgtgca attatcgttt ctactgagca gcaaaaatta gatgttgaaa aacgtattaa
      901 ccatactatt ccagttgtta atattcctgt cggctatagt gaaacaattg atacaccagt
      961 ccaaacatta gatcagcgca gtgttaaatt aatttccatt gctcgttatt cacctgaaaa
     1021 acaattacat caacaaattg aattaattaa acgcttagta tcttatgtcc ctaaaataga
     1081 gcttcatatg tatggttttg gttctgaaag taaaaaatta aatgaattga tacaaaaata
     1141 tggattggaa aatcatgttt acttacgcgg ctttttaagc aatctagacc aagaatatag
     1201 cgatgcctat ttgagtttaa taacaagtaa catggaaggt ttctctttag cgctacttga
     1261 atctttagca catggtgttc cagttattag ttatgatatt aaatatggac ctaacgaatt
     1321 gattacgcct gatttcaatg gttatttaat tactaaaaat gatgaagatg ccctatttga
     1381 taaagtaaaa tatgtgattg atcatcctga agtacaacaa cgactgtcaa aaggtagttt
     1441 ggcaaaagcg caacaatata gtaaagcgtc gttaattaaa caatgggacc aatttgttcg
     1501 tcttatataa atgtacttta cctttatttt tataaaaaaa gcattttcct atgtcattta
     1561 actaaacttg taagttcgta tgaacgtggt ttgttaaata gatgattcta ggaaaatgct
     1621 tttttctttt gacttagttt aaaatatttt gccactttat actaacattt gtctcattaa
     1681 attgctgagc atactctata ctattaatcg aaaactgttg catcatttgg ctattattta
     1741 gtaattggtc gaccttttca accatttgat tgatgtcacc ttgaggtact aaatagccat
     1801 taaatccatc ttgaatcagt tctgatggcc cataatctac atcataactg attactggtg
     1861 tacctactga aagcgactct aaaattgcta agccaaaacc ttccatttta cttgtcgata
     1921 acatcagttc tgctttagca atctcttcat taatatgcgt cttaaaacca tgaaatttaa
     1981 catgttccga taaatgataa tcttctacaa gttgtcgata ttctgacaaa ccatttccat
     2041 gtccataaat attcaattga atattgggat gttttgttac taattgcttg atcacttcaa
     2101 tttgatgttt aatttgttta ttttcaacga ggcgagcaat tgatatgata tgatttttct
     2161 ccttttgatt gatgtcaaat tgatacttta aatttgccac atagccaacc ggaatattga
     2221 taactggtat tttattttca atatattgtg aaatatcttg gcattgcttt tctgttgata
     2281 caacaatcgc tttataacgt gttaaattat taaacactgt tttataaaaa ctttttatac
     2341 cattaccggt gccggataaa tgtgtactgt ggagcacaac aataactgga atactttgat
     2401 ttaatcccgc aataacattt cctaattcat gaggacggtc taatatgatt tgatcattat
     2461 ttttacataa ttgatgaaga aaatattgaa ctaattcatc ttctgtatca aaaaattgtt
     2521 gatgctggcc ttcatttaaa gtaatctttg tgagcgtgtt tttccctttt atatcgtcga
     2581 aatatttttg gatgacgatt tctccattag gtgtatagta attttcgagt acaatccgtt
     2641 gtccttcacc taaaattcga gaacaactta aaaagcctct tccatcatac aattcacgtt
     2701 ttacttttct tcttttatga tcaaaataat tcacatagtt taattgatga tactgtttat
     2761 ctaaaaaatg agcatacatt ataaattgct cttcatcata tattctgaca tcatttgaat
     2821 tttcaacaaa tttcaatgtg tacctacatg acttttccca atactgtatc cagttaactt
     2881 gctttgtctt tttataattg attgcttttt gaaaatagtc atacattgta aacagatcat
     2941 tttcaatctg atgttgcttc gcatatgtgt atgaataagg attccattta acatatacac
     3001 attttgaaga tatgccgtgt tgtttgaaca acttcagtct atttatttgt gctttttcta
     3061 cacctgtaat tttactttct aaaattgttc ctaaaatgta attcatatta tcgcctcata
     3121 taagttttat tccgtatctt tattgtttat tttatatgaa aaatacatct attgcatgtg
     3181 taatcataaa aaaaccaggc cacaaggacc tgggtcatat tgtattattt gttttgtttt
     3241 ttgcgacgac cgaataacaa taatgaacct aatgctgcga ataatccgcc aaataacgtt
     3301 gcgttatttg agccgttatt ttcactacct gtttctggta atgctttcgc tttattgtga
     3361 tggtctttag tagcactcat tggtttcaca ggtgtatgtt ttcctgca
//
LOCUS       DALMNS010000146         3381 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.146, whole genome shotgun sequence.
ACCESSION   DALMNS010000146 DALMNS010000000
VERSION     DALMNS010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3381)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3381)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3381
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.146"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(541..1818)
                     /locus_tag="O6Y56_002479"
     CDS             complement(541..1818)
                     /locus_tag="O6Y56_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002463344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5575714.1"
                     /translation="MKEKRTNVRWMFALAFFFIGVIAYMDRANISYIAKQMMDDLGMT
                     KPQFGLLASFFSLGYALMQVPSGMLAEKFGPRKMITIALVWWSAFTILTGMVKNHGLI
                     YLVRFLFGVGEAPMYPSNAVFNSFWFSKNEKGRASSALLAGSYFGPVLAPIVTIAIVN
                     AFNWQAVFYIFGAVGILMAVLWAIIAKDLPEQHRMVNEAEKRFIMENRDIVATEKSSP
                     PWNDFFKRFSFYAIAIQYFVVQFIITLFLIWLPTYLTEVFHVNFKEMSISSLPWLLMF
                     FLILSAGAISDRVLGLGRSKFVARGVIAIAGFIVFAVSIIFAVRTGNLYVSIFWLSLG
                     LGGIGISMGMSWAAATDLGRNFSGTVSGWMNLWGNIGALISPLLAGLFVEHLGWTMTF
                     QLLIVPAVIAVIMWFYVKPDQPLIVSDDKAIEK"
     gene            2365..2976
                     /locus_tag="O6Y56_002480"
     CDS             2365..2976
                     /locus_tag="O6Y56_002480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDB5575715.1"
                     /translation="MEQIITEFISRFGYAAIFILILLENVLPIVPSEIILTFAGLMSV
                     KSHLSIITLFIIATIASFIGLLILYYICRLISEERLYRFIDRHGKWIKLKSKDLKRAN
                     DWFKKYGVWAVFICRFIPVLRVLITIPAGVNRMNVVTFTVISLIGTTIWNFGLILLGR
                     TLSDSFGMLMTGLHTYSRIMYVVIIIAVIYFAIRYIGKRKRVK"
     gene            complement(2985..3083)
                     /locus_tag="O6Y56_002481"
     CDS             complement(2985..3083)
                     /locus_tag="O6Y56_002481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575716.1"
                     /translation="MPNKLKKAVNHFNRWNDSLLFVYRNLKFMPLY"
BASE COUNT         1144 a          609 c          459 g         1169 t
ORIGIN      
        1 cttagtgtct atttacttca tattattcct agggttcaag atccaaacta tagtgaattt
       61 aagaaagttt ataaaacata tttgcctcat aaacttgaat agttcctata ttcgttattt
      121 aaaatgacat tcgatgtcag ttcatttctt aaaatatcga aagatgatta cgtataatat
      181 atatagtgac gtatttacaa ataatggcag taagcaatac aaaatgatta cacaaaaatt
      241 tccttctact cgataaatta agaagtataa aataattaaa aaaatactta taattagacc
      301 tataagaggc aaacttctaa tatatttttc taagttttcc ttcatatgta taacctccta
      361 aaatttatat gtacttttac aagcgttacc tgactaaggt tttaaaactt tatttcttct
      421 acatatatca ttttaataac ttcccattca tcttaaacca tatctgtttt aaaatttttc
      481 aatttcaacg taaaaaaagc aataagcccc aactatgtga aagcttactg cttgtttaaa
      541 ttatttttct attgctttat catcactaac aattaaaggt tgatctggtt tcacatagaa
      601 ccacataatc acagcgatta ctgctggaac gattaacaat tggaatgtca ttgtccaacc
      661 taaatgttct acgaatagac ctgctaatag cggactgatt aatgcaccta tattacccca
      721 taagttcatc catcctgata ctgtaccaga gaagttacgt cctaaatcag ttgctgcagc
      781 ccaactcata cccattgaaa taccgatacc accaagacct agtgataacc agaaaatact
      841 tacatataaa tttcctgtac gtacagcaaa gataattgaa actgcaaata caataaatcc
      901 tgcgattgca atgacacctc tagctacgaa ttttgaacga cctaatccta atacacggtc
      961 agaaattgca cctgctgata agattaagaa gaacattaat aaccaaggta atgaactaat
     1021 gctcatttct ttaaagttaa cgtggaatac ttctgttaaa tacgtcggta accaaattaa
     1081 gaataatgta atgataaatt gtacaacaaa gtattgaatt gcaattgcat agaagctaaa
     1141 acgtttaaag aaatcattcc atggtggtga tgacttttca gtagctacga tatcacgatt
     1201 ttccataatg aaacgtttct ccgcttcatt aaccattcta tgttgctcag gtaagtcttt
     1261 ggcaataatc gcccataata cagccattaa aatacctact gcaccaaaaa tgtaaaatac
     1321 tgcttgccag ttaaatgcgt taacaatagc aattgtaact attggtgcta atacaggtcc
     1381 gaaatatgat cctgctaata atgcacttga tgctctacct ttttcatttt tagagaacca
     1441 aaatgagtta aacacagcat tagaagggta cattggcgcc tcacccacac caaataagaa
     1501 tctcactaaa taaattaaac cgtggttctt aaccataccc gttaagattg taaatgcact
     1561 ccaccaaact aatgcaattg taatcatctt acgtggaccg aatttttcag ccaacatccc
     1621 cgatggtact tgcattaatg cataacctag agagaagaac gatgccaata aaccaaattg
     1681 tggttttgtc atccctaaat catccatcat ttgcttagcg atatatgaaa tgtttgctct
     1741 atccatatac gcaataaccc caataaagaa gaacgcaagc gcgaacatcc accttacgtt
     1801 agttcgtttt tccttcataa ctattcctac ttccctaatt aattttttaa aacttaccct
     1861 gaaacgttaa aattttcgga catctggcat gtccacccct actttgtcac aaaattgtac
     1921 caaagttatt ttttataata ttatcagaca tggaaagcgt ttacaataga atctataaaa
     1981 attttattaa attccgctta acttttgcta ttaaaacgat ataaaggaac ttttagttac
     2041 atagtagcct atcatttgtt aattaaaaat actgcaattc tagtgtttta aaacgtatat
     2101 tgcaggcttt cttacatatt cgacattcat tttaaattgc ataaaactac attgctcatt
     2161 cattgtgcag cgcctgttat ttagatgatt acttgttgac ttttcgtact tatagcaagc
     2221 aattttttga tttattgctt ataatacatt ttaagacaaa tgcttgtttc aacatcgcat
     2281 acgacatcat tcattattca tttgaattta tccagtttct atttgtctgc aattgctgaa
     2341 aattaaagga gcttattttt aataatggaa caaattatca ctgaatttat tagtcgtttt
     2401 gggtatgcag ccatttttat attaatttta ttagaaaatg ttttacctat cgtaccatcg
     2461 gaaattattc tgacatttgc tggtcttatg tctgttaaat cacatttatc aattataacc
     2521 ttatttatta ttgcaaccat cgcatcattt ataggattgt taattttata ttatatctgt
     2581 cgtttgattt cagaagaacg tctatatcgc tttattgatc gacacggtaa gtggattaaa
     2641 ttgaaaagta aggatttaaa gcgagcaaat gattggttta aaaagtatgg cgtatgggct
     2701 gtatttatct gtcgtttcat acctgtatta cgtgtattga ttaccattcc agccggtgta
     2761 aaccgcatga atgttgtgac atttaccgtt atttcattaa taggtacaac aatttggaat
     2821 ttcggtttaa ttttactagg acgcacgttg agcgatagct ttggtatgtt gatgactggt
     2881 cttcatacat attcacgtat tatgtatgtt gtcatcatta tcgcagtcat ttactttgct
     2941 atacgttaca ttggcaaacg taagagagta aaataatatt gttgttagta taaaggcatg
     3001 aattttaaat ttctataaac aaaaagcagt gaatcattcc atctattgaa atgattcact
     3061 gcttttttaa gtttatttgg catactttag ctgaaagtca tctaaaaccc tttacgttaa
     3121 gagatataat gaagtttccc atcaaagttc agttccctca gtatatatac attccgcaaa
     3181 cgcatctcac aaatccatct ataatacaaa ttatcatttt aaataagcag aatttaccct
     3241 gtcttccaca caaactgttt tcgtcacttt aatatgcctt ctattcaaaa aagtcactca
     3301 taacaaattg cgcattttaa taaatgtagc aatgccattt gcatgctgca aaaatactct
     3361 tattcatatt tatattttat a
//
LOCUS       DALMNS010000147         3328 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.147, whole genome shotgun sequence.
ACCESSION   DALMNS010000147 DALMNS010000000
VERSION     DALMNS010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3328)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3328)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3328
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.147"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..95)
                     /locus_tag="O6Y56_002482"
     CDS             complement(<1..95)
                     /locus_tag="O6Y56_002482"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499560.1"
                     /note="catalyzes the formation of
                     (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-
                     carboxamido)succinate from
                     5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and
                     L-aspartate in purine biosynthesis; SAICAR synthase;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDB5575717.1"
                     /translation="MTLLYEGKAKRIFSTNQENELRVEYKDEVTAG"
     gene            complement(99..1223)
                     /gene="purK"
                     /locus_tag="O6Y56_002483"
     CDS             complement(99..1223)
                     /gene="purK"
                     /locus_tag="O6Y56_002483"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HDB5575718.1"
                     /translation="MNFNKLKFGATIGIIGGGQLGKMMAQSAQKMGYKVAVLDPAEDC
                     PCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENISSQQLKLLCEKYNIPQGYQAI
                     QLLQDRLTEKETLKSAGTKVVPFISVKESTDIDKAIETLGYPFIVKTRFGGYDGKGQV
                     LINNEKDLQEGFKLIETCECVAEKYLNIKKEVSLTVTRGNNNQITYFPLQENEHRNQI
                     LFKTIVPARIDKTAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSG
                     HYSIEACDYSQFDTHILAVTGQSLPNSIELLKPAVMMNLLGKDLDLLENEFNEHPEWH
                     LHIYGKSERKDSRKMGHMTVLTNDVNQTEQDMYAKFEGSN"
     gene            complement(1210..1692)
                     /gene="purE"
                     /locus_tag="O6Y56_002484"
     CDS             complement(1210..1692)
                     /gene="purE"
                     /locus_tag="O6Y56_002484"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDB5575719.1"
                     /translation="MKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMM
                     VQFASEARERGIDIIIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQ
                     MPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVEKLNQYESSLIQKVEDMQNELQ
                     "
     gene            1893..2753
                     /gene="folD"
                     /locus_tag="O6Y56_002485"
     CDS             1893..2753
                     /gene="folD"
                     /locus_tag="O6Y56_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDB5575720.1"
                     /translation="MVAKILDGKQIAKDYRQGLKNQVEALKEKGFTPKLSVILVGNDG
                     ASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPK
                     QVSEQKILEAINPDKDVDGFHPINIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKN
                     AVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVSAVGKPGLVTKD
                     VVKEGAVIIDVGNTPDENGKLKGDVDYDAVKEIAGAITPVPGGVGPLTITMVLNNTLL
                     AEKMRRGVDS"
BASE COUNT         1069 a          564 c          554 g         1141 t
ORIGIN      
        1 ccagcagtaa cttcatcttt atattcaact cttaattcat tttcttgatt tgttgagaaa
       61 atgcgcttcg cttttccttc atataataat gtcatgcttt aattactccc ctcaaattta
      121 gcgtacatat cttgttcagt ttggttaaca tcattcgtta gtacagtcat atgccccatt
      181 tttctgctat ctttacgctc agacttacca taaatatgta agtgccactc tggatgttca
      241 ttaaattcat tttccaataa atctaagtct ttacctagta agttcatcat gactgcaggc
      301 tttaataatt caattgaatt tggtaatgat tgtccggtaa ctgctaaaat atgagtatca
      361 aattgtgaat aatcacatgc ttcaattgaa taatgtccgg aattgtgagg ccttggtgca
      421 atctcgttca catacaattg gttgttacta tctataaaaa attcaactgt aaatgttcca
      481 atgaaatgaa tcgattggat aattttatta acttgctctt tcgcctcagc tgttttatct
      541 attctcgctg gaacaattgt tttgaaaagt atttgatttc tatgctcatt ttcttgtaat
      601 gggaaataag tgatttgatt gttgtttcct cttgtaacag taagtgatac ttctttcttg
      661 atattcaaat atttttcagc tacgcattca caagtttcaa ttaatttaaa accttcttgt
      721 aagtcttttt cgttgttaat taaaacttga cctttgccat cgtagccacc aaatctagtt
      781 tttacaataa aaggatatcc taatgtttca attgctttgt caatatctgt agattctttt
      841 actgaaatga atgggacaac cttggtacca gcacttttta atgtttcttt ttcagttaag
      901 cggtcttgta ataactgtat agcttggtaa ccttgcggaa tattgtactt ttcacataat
      961 agttttaatt gttgggatga aatgttttca aattcataag taatcacatc acatttttgt
     1021 cctaattgat tgagtgcctt ttcatcgtca tacttggctt gtataaattc gtgtgcaacg
     1081 tatctacatg gacaatcttc agcaggatcc aatacagcca ctttataacc cattttttga
     1141 gctgattgtg ccatcatctt tccaagctga ccaccaccaa taatgccaat agtcgcacca
     1201 aactttaatt tattgaagtt cattttgcat gtcctccact ttttgaatta acgaagattc
     1261 atactgattt agtttttcaa ctaaagaagg attttgaata cttaacattc ttgctgcaag
     1321 tatacctgcg tttttagcac ctgctgcacc aattgcagtc gttgcaaccg gaatacctcc
     1381 tggcatttga acaattgata ataaagaatc tatacccttt aaactttttg tttcaatcgg
     1441 cactccaata actggtagcg tcgttaatga tgcaaccata cctggtaaat gtgccgcacc
     1501 gccagcgcct gcaatgataa tgtctatacc tctttctctc gcttcagaag caaattgaac
     1561 catcattttt ggcgtacgat gtgcggatac tacttgtttt tcgtacggaa tttcaaaata
     1621 atccaacatg ttacaactct cttgcataat tttccaatcg gaagaactgc ccataatgac
     1681 tgctactttc actttgtaca ccctttcaaa agtttgaatt gtgaattact ttagttgtat
     1741 attatagata tagcataaca agcaatttct gctttttcaa tcaaaaatcg aactttattt
     1801 tgattttttg tttgaattta cgtcttttgc tatgtaaatt agttttatga actaacaaag
     1861 ttaggatatt gacaatagga ggagaagttt ttatggttgc taaaatttta gatggtaaac
     1921 aaattgccaa agactacaga caggggttaa aaaatcaagt tgaagcgcta aaagaaaagg
     1981 gttttacacc taaattatcc gttatattag ttggtaatga tggcgctagt caaagttatg
     2041 ttagatcaaa aaagaaagca gctgaaaaaa ttggtatgat ttcagaaatc gtacacttgg
     2101 aagaaacagc tactgaagaa gaagtattaa acgaactaaa tagactaaat aatgatgatt
     2161 ctgtaagtgg tattttggta caagtaccat taccaaaaca agttagtgaa cagaaaatat
     2221 tagaagcaat caatcctgat aaagatgtgg acggtttcca tccaataaat atagggaaat
     2281 tatatatcga tgaacaaact tttgtacctt gcacaccgct tggcatcatg gaaatattaa
     2341 aacatgctga tattgattta gaaggtaaaa atgcagtagt aattggacga agtcatattg
     2401 tcggacaacc agtttctaag ttactacttc aaaaaaatgc atcagtaaca atcttacatt
     2461 ctcgttcaaa ggatatggca tcatatttaa aagatgctga tgtcatagtc agtgcagttg
     2521 gtaagcctgg tttagtaaca aaagatgttg tcaaagaagg agcagtaatt atcgatgttg
     2581 gcaatacgcc agatgaaaat ggcaaattaa aaggtgacgt tgattatgat gcggttaaag
     2641 aaattgctgg agctattaca cctgttcctg gtggcgttgg tccattaaca attacaatgg
     2701 tattaaataa taccttgctt gcagaaaaaa tgcgtcgagg tgttgattcg taaattcaca
     2761 ttagttatgt actgagaatt aatatctgag ttttaatgaa ctcttttaat cctcattaaa
     2821 tattatttcg caattgcaat gaataataag aagaatctgg gacattaatc aatcaaatgc
     2881 tcccttcaaa gtagacattg aaaaaatgaa ggctttgaag ggagcatttc acattgttct
     2941 aggctcaaca attttatata gacagtaatt aattgaatga aaataagctt gtaacaagtt
     3001 ttcaattcta gtcggggccc caacacagag aatttcgaaa agaaattcta caggcaatgc
     3061 gagttggggt agtggcccca acaaagaagc tgacgaaaag tcagcttaca ataatgtgca
     3121 agtcggcgag gccccaacac agaagctgtg actatgataa agtactacta cataattaat
     3181 cattagtggt tctttatcat tttcgcctcc cttttcttat tgttttgata cacaaaaatt
     3241 taagttcaaa ctgtcgaata aagttatatt tgatttcaaa ttatccctga attattaatt
     3301 ttacaattgt ggcagatttt caaaataa
//
LOCUS       DALMNS010000148         3211 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.148, whole genome shotgun sequence.
ACCESSION   DALMNS010000148 DALMNS010000000
VERSION     DALMNS010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3211
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.148"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            339..1298
                     /gene="hyl"
                     /locus_tag="O6Y56_002486"
     CDS             339..1298
                     /gene="hyl"
                     /locus_tag="O6Y56_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hemolysin"
                     /protein_id="HDB5575721.1"
                     /translation="MKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNT
                     TVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKKLLVIRTKGTIAGQYRVYSEEGANKS
                     GLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDTGKIGG
                     LIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYG
                     NQLFMKTRNGSMKAADNFLDPNKASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYE
                     RVRDDYQLHWTSTNWKGTNTKDKWTDRSSERYKIDWEKEEMTN"
     gene            1775..2008
                     /locus_tag="O6Y56_002487"
     CDS             1775..2008
                     /locus_tag="O6Y56_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575722.1"
                     /translation="MVFNDWEINVVYSGEHEVVANEKSLFVIDEFYDVAIAIYYLDGK
                     LKVAHVNYGSDFTIDVANKVFELNIQNPNVDEH"
     gene            2627..2812
                     /locus_tag="O6Y56_002488"
     CDS             2627..2812
                     /locus_tag="O6Y56_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575723.1"
                     /translation="MNKHINKKATKLLEDYKKVQQRKSEETDRGCLKSVIMLIVLFFL
                     IIFGIVACSTNVNFFFQ"
BASE COUNT         1181 a          449 c          482 g         1099 t
ORIGIN      
        1 tatattgtaa tcgattacat ttttaaatca aacaaatcat tagttttaaa gaaattaatc
       61 aataaaatta gctatgtctt ttccttgttt cataaagaat ttattcaact ttgactaacc
      121 ctcgaaattg aaatgcttcc tttcaaattt taaataaaag ttaaaaacat attcttaaaa
      181 taatcactca tcatcactca gtaatttatc agttgctaca ttaaatatac taatataaac
      241 gattataaat atttgatatg tctcaactgc aatattctaa attgacatat tgattattgt
      301 ttcctcaaat cgttttaaaa aatagaagga tgatgaaaat gaaaacacgt atagtcagct
      361 cagtaacaac aacactattg ctaggttcca tattaatgaa tcctgtcgct aatgccgcag
      421 attctgatat taatattaaa accggtacta cagatattgg aagcaatact acagtaaaaa
      481 caggtgattt agtcacttat gataaagaaa atggcatgca caaaaaagta ttttatagtt
      541 ttatcgatga taaaaatcac aataaaaaac tgctagttat tagaacgaaa ggaaccattg
      601 ctggtcaata tagagtttat agcgaagaag gtgctaacaa aagtggttta gcctggcctt
      661 cagcctttaa ggtacagttg caactacctg ataatgaagt agctcaaata tctgattact
      721 atccaagaaa ttcgattgat acaaaagagt atatgagtac tttaacttat ggattcaacg
      781 gtaatgttac tggtgatgat acaggaaaaa ttggtggcct tattggtgca aatgtttcga
      841 ttggtcatac actcaaatat gttcaaccgg atttcaaaac aattttagag agcccaactg
      901 ataaaaaagt aggctggaaa gtgatattta acaatatggt gaatcaaaat tggggaccat
      961 atgatagaga ttcttggaac ccggtatatg gcaatcaact tttcatgaaa actagaaatg
     1021 gctctatgaa agcagcagat aacttccttg atcctaacaa agcaagttct ctattatctt
     1081 caggtttttc accagacttc gctacagtta ttactatgga tagaaaagca tccaaacaac
     1141 aaacaaatat agatgtaata tacgaacgag ttcgtgatga ctaccaattg cattggactt
     1201 caacaaattg gaaaggtacc aatactaaag ataaatggac agatcgttct tcagaaagat
     1261 ataaaatcga ttgggaaaaa gaagaaatga caaattaatg taaattattt gttcatgtac
     1321 aaataaatat aatttataac tttagccgat aacttcagaa atgatgtttt tcggctaatt
     1381 tttatactga atttagttta attaacttat gatattttta atttaaacta tctacttgat
     1441 ttgctttcct gacttaaaag ttagactaaa catgacacta tatgaggtga tttttaaaat
     1501 aagatatttg aattccatgt tgtcaaaccc tttatataaa agttttgaaa ttgttcaaaa
     1561 ctttttgaac acattatgtg ttaatatatt tgcagaatta ttttaaaatc gttttaaaac
     1621 tatactgaaa taagaaattt aaaagtataa ttagtacata taattgaaaa agatttctag
     1681 aaatacaatt aatgttcatc tagatattgt acgaagttgt atgaataagt taaacttaag
     1741 ttgaatcaat ttaaatgttc aaggaggtta acaaatggtt tttaatgatt gggaaattaa
     1801 cgttgtatac tcaggagagc atgaggttgt agcaaacgaa aagagtttat ttgtcattga
     1861 cgaattttac gatgttgcaa tcgcaatcta ttatttagat ggaaaattaa aagtagctca
     1921 tgtcaactat ggttctgatt ttacaattga cgtagctaat aaagtttttg aattgaatat
     1981 tcaaaatcca aatgttgatg agcattaaat attaaaaagc atttagaatc ataaagagca
     2041 tactatatat agccttttac atgtaaagca aatgaaaatt agataatcta attatttcaa
     2101 cattaaacaa tatatcatta taaagaagtt tttaaaatag aagtataagg tggtgaacaa
     2161 aaattaacat tgtgtataac attatagtat atatagcatg catgattaat ttcggattaa
     2221 ttatagtccc attattaaca acaaatgatg cggattttgt atggacttct tcatcattaa
     2281 tatatatgat tcttcttacg tcgattatcc taatagttta tattaaaact aaagatagct
     2341 tacagttaac gatatttata cttaatatag ccttaattat tctatactgt acaccattac
     2401 tattcattta tgtattctag tgcttcatta atattttaat gcatcagttt aagtaaattc
     2461 catttggaaa aaaagcacat ctcatcatca aattaacata tttaacgtta tactttcata
     2521 aaatttgaaa caattgaaca tccttacttt agctttatat ctttatttca agtcatgttt
     2581 tcaactattt taatgaatta aacatatatt ataaggagtc aacatcatga ataaacatat
     2641 aaataaaaaa gcgacaaaac tacttgaaga ttataaaaag gttcaacaaa gaaaatcgga
     2701 agaaactgat agaggttgtt tgaaaagtgt catcatgctt atcgtcttat ttttcttaat
     2761 tatttttggt attgtggcat gttctacaaa cgtaaacttt ttcttccagt aaaagagtga
     2821 gatagaaatg ataaagaacc actaatgatt tattatgtag tggttcttta tcattagctg
     2881 tagctaatgt gtacttaaaa aatgaataca tgagtaaaac tcatgcataa gaaatactaa
     2941 tttctaaaga aacagtattt ctttatgttt ggggcccgcc aacttgcaca ttattgtaag
     3001 ctgacttttc gccagcttct gtgttgggac cccaccccaa cttgctttgt ctgtagaaat
     3061 tggggttcca atttctctat gttggggccc cgccaacttt cattgtctgt tggaattggt
     3121 gatccgattt ctctatgttg gggcccaccc caacttgcat tgtttgtaga atttcttttc
     3181 gaaattctct gtgttggggc cccacgagta t
//
LOCUS       DALMNS010000149         3180 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.149, whole genome shotgun sequence.
ACCESSION   DALMNS010000149 DALMNS010000000
VERSION     DALMNS010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3180)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3180)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3180
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.149"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            117..557
                     /locus_tag="O6Y56_002489"
     CDS             117..557
                     /locus_tag="O6Y56_002489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000846746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwpF-like family protein"
                     /protein_id="HDB5575724.1"
                     /translation="MKTFKAVRFQIVNEHGRIIEYELEDGVIINKEESGTGWLLEIVI
                     SNEHYETFKEYQDNEQLLDIRVVITRPANDPALFESTVKSIKNFKTTMSIVFECHIYT
                     LRQQYAESLLEQLIDDGLSGEELKKSFNRMMQSKPKLKDEKLEE"
     gene            complement(614..1054)
                     /gene="fabZ"
                     /locus_tag="O6Y56_002490"
     CDS             complement(614..1054)
                     /gene="fabZ"
                     /locus_tag="O6Y56_002490"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDB5575725.1"
                     /translation="METIFDYNQIKQIIPHRQPFLLIDKVVEYEEGQRCVAIKQVSGN
                     EPFFQGHFPEYAVMPGVLITEALAQTGAVAILNSEENKGKIALFAGIDKCRFKRQVVP
                     GDTLTLEVEITKIKGPIGKGNAKATVDGQLACSCELTFAIQDVK"
     gene            complement(1088..2353)
                     /gene="murA"
                     /locus_tag="O6Y56_002491"
     CDS             complement(1088..2353)
                     /gene="murA"
                     /locus_tag="O6Y56_002491"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDB5575726.1"
                     /translation="MDKIVIKGGNKLTGEVKVEGAKNAVLPILTASLLASDKPSKLVN
                     VPALSDVETINNVLTTLNADVTYKKDENAVVVDATKTLNEEAPYEYVSKMRASILVMG
                     PLLARLGHAIVALPGGCAIGSRPIEQHIKGFEALGAEIHLENGNIYANAKDGLKGTSI
                     HLDFPSVGATQNIIMAASLAKGKTLIENAAKEPEIVDLANYINEMGGRITGAGTDTIT
                     INGVESLHGVEHAIIPDRIEAGTLLIAGAITRGDIFVRGAIKEHMASLVYKLEEMGVE
                     LDYQEDGIRVRAEGDLQPVDIKTLPHPGFPTDMQSQMMALLLTANGHKVVTETVFENR
                     FMHVAEFKRMNANINVEGRSAKLEGKSQLQGAQVKATDLRAAAALILAGLVADGKTSV
                     TELNHLDRGYVDLHGKLKQLGADIERIND"
     gene            complement(2464..2697)
                     /locus_tag="O6Y56_002492"
     CDS             complement(2464..2697)
                     /locus_tag="O6Y56_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1146 domain-containing protein"
                     /protein_id="HDB5575727.1"
                     /translation="MDYIGQFAVIHLVLHVVCICIAYWALQSIRLDQFFKKGYATQLQ
                     VCMIFVAILLGTAVSNFIVDLLQYSTQVKYLIK"
     gene            complement(2829..2906)
                     /locus_tag="O6Y56_002493"
                     /pseudo
     CDS             complement(2829..2906)
                     /locus_tag="O6Y56_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500818.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1048 a          563 c          472 g         1097 t
ORIGIN      
        1 ttaatagcta tagcatctcg ttatttgtta tatttaaaga aattagtcat gaaatgacct
       61 taattcttct aattaattca aaaatcataa atattaaact aatgggatgt gggaatatga
      121 aaacttttaa agcagtaagg tttcaaattg taaatgaaca cggcagaatt atagaatatg
      181 aattagaaga tggcgtaata attaataaag aggaaagtgg cacgggttgg ttgcttgaaa
      241 ttgtcatttc taatgagcat tatgaaacat ttaaggaata tcaagacaat gaacagttat
      301 tggatattcg tgtcgtcatc acgcgtccag ccaatgatcc agctttattt gaatctactg
      361 tgaaaagtat taaaaatttt aaaacaacaa tgtctatcgt atttgaatgt catatttaca
      421 ctttacgtca acagtatgct gaaagtttat tagaacaact tattgatgat ggattatctg
      481 gtgaagaatt aaaaaaatca tttaatcgaa tgatgcagtc taaaccaaag ttaaaggatg
      541 aaaaattaga agagtaaaat aaaaaacatt caaagattat gccaacacat taaatctttg
      601 aatgtttttt gttttatttt acatcttgaa ttgcaaatgt aagttcacaa ctacaagcaa
      661 gttgaccatc gacagtagct ttagcattac ctttaccgat tggtccttta attttagtga
      721 tttctacttc caatgttaaa gtatcaccag gtactacttg acgtttaaaa cgacatttat
      781 caataccagc aaataaagcg attttacctt tattttcttc actatttaaa atagctaccg
      841 cacctgtttg agctaacgct tcagtaatta atacgcctgg cattaccgca tactcaggaa
      901 aatgcccttg aaagaatggt tcgtttcctg atacttgttt aatagccaca caacgttgac
      961 cttcttcata ttcaactact ttatcaatta ataaaaatgg ctgtctgtga ggtataattt
     1021 gtttaatttg gttataatca aaaattgttt ccatggttga aatcctccat tatattaatt
     1081 tactgaatta atcgttaata cgttcaatgt ctgcacctaa ttgcttcaat ttgccatgta
     1141 agtcaacata tcctctatct aaatgattca attcagtgac acttgtttta ccatcagcaa
     1201 ctaatccagc taaaattaag gctgctgctg ctcttaaatc agtcgcttta acttgcgcac
     1261 cttgcaattg acttttgcct tcaagttttg cactgcgacc ttcaacattg atattcgcgt
     1321 tcatacgttt gaactctgca acatgcataa aacgattttc aaatacagtt tcagttacta
     1381 ctttatgtcc atttgctgtt aataataatg ccatcatttg tgactgcata tcggttggga
     1441 aaccaggatg cggtaatgtt ttgatgtcaa caggctgtaa atctccttca gctcttacac
     1501 gaatgccgtc ttcttgatag tccaattcaa cgcccatttc ttctaattta tacactaaac
     1561 tagccatatg ttctttgatt gcaccacgta caaaaatatc gccacgagta atggcaccag
     1621 cgattagtaa tgtgcctgct tcaattctat ctggaatgat agcatgttct acaccatgta
     1681 atgattctac accattgatt gtaattgtgt ctgtaccagc accagtaatt ctaccgccca
     1741 tttcattaat gtaatttgct aaatcgacaa tttcaggttc tttagctgca ttttcaatta
     1801 aagtcttacc cttagctaat gatgctgcca taataatatt ttgtgttgct cctacacttg
     1861 gaaaatctaa atgaattgat gtacctttta atccatcttt agcattagca taaatattac
     1921 cattttcaag atgaatttct gcgcctaaag cttcaaaacc tttaatgtgt tgctcaatcg
     1981 gtctacttcc aattgcacaa ccaccaggca atgcaacaat agcatgtcct agtcttgcta
     2041 aaagaggtcc cataactaaa atacttgcac gcattttact aacatattca tatggtgcct
     2101 cttcatttag agtctttgtt gcatcaacga caacagcgtt ttcgtccttt ttgtatgtaa
     2161 cgtcagcatt taaggttgtt aatacattat ttattgtttc tacatcactt aaagctggaa
     2221 cattaactaa tttactcggt ttatcagaag ctaataaaga tgctgtcaat attggtaata
     2281 ctgcattttt agcaccttct actttaactt cacccgttaa tttatttcca cctttgatta
     2341 ctattttatc catcgtaaat cctccactta gaactcctat tactttacat ttccctattt
     2401 taaaattatt ttaagtcatt atttaattat atctagtttt gattacaaat catagagtta
     2461 gacttatttt attaaatatt ttacctgcgt cgagtattgt aacaaatcta caataaaatt
     2521 gcttactgca gtgcctaata aaatagcaac aaatatcata cacacttgta attgagtggc
     2581 gtatcctttt ttaaaaaatt gatctaatct aattgattgt aaagcccaat aggcaataca
     2641 aatacataca acatgtaaca ctaaatggat aactgcaaat tgtccgatat aatccatttt
     2701 atcacctcat aagattactg tattacattg tacatgaaaa atttaaataa tgatacaaag
     2761 tttaataccc gtttttagta aagtttaagc taacttacta tataattctt tttacataaa
     2821 tatcataact ataaagtatc ttggcatgaa aaaatgtagc tactttcaaa aaatgaaatg
     2881 tcgactgtag atagtggtga aaagaaattt tgattttagc aatctattag tgattgtaaa
     2941 aagtaaaact attcttgaga gtcggacata aatcaatgtc tagactctat agtgttatat
     3001 ttggcagtag ttgacggggc cccaagacag aagctggcgg aaagtcagct tacattaatg
     3061 tgcaagttgg gggcggggcc ccaacataga gaaattggaa caccaatttc tacagacaat
     3121 gcaagttggg gtgggcccca acataaagaa atactttttc tttagaaatt agtatttctt
//
LOCUS       DALMNS010000150         3088 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.150, whole genome shotgun sequence.
ACCESSION   DALMNS010000150 DALMNS010000000
VERSION     DALMNS010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3088
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.150"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..250
                     /locus_tag="O6Y56_002494"
     CDS             <1..250
                     /locus_tag="O6Y56_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HDB5575728.1"
                     /translation="SDSDSDSDSDNDSDSDSDSDSNAGKHTPAKPMSEVKDHHNKAKA
                     LPETGSENNNSNNGTLFGGLFAALGSLLLFGRRKKQNK"
     gene            649..>3088
                     /locus_tag="O6Y56_002495"
     CDS             649..>3088
                     /locus_tag="O6Y56_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_047430389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrinogen-binding adhesin SdrG C-terminal
                     domain-containing protein"
                     /protein_id="HDB5575729.1"
                     /translation="MINRDNKKAITKKGMISNRLNKFSIRKYTVGTASILVGTTLIFG
                     LGNQEAKAAENTSTENAKQDDATTSDNKEVVSETENNSTTENNSTNPIKKETNTDSQP
                     EAKEESTTSSTQQQQNNVTATTETKPQNIEKENVKPSTDKTATEDTSVILEEKKAPNN
                     TNNDVTTKPSTSETQTKPTTPQESTNIENSQPQPTPSEVDNQVTDATNPKEPVNVSKE
                     ELKNNLEKLKELVRNDSNTDRSTKPVATAPTSVAPKRVNAKMRFAVAQPAAVASNNVN
                     DLIKVTKQTIKVGDGKDNVAAAHDGKDIEYDTEFTIDNKVKKGDTMTINYDKNVIPSD
                     LTDKNDPIDITDPSGEVIAKGTFDKATKQITYTFTDYVDKYEDIKSRLTLYSYIDKKT
                     VPNETSLNLTFATAGKETNQNVTVDYQDPMVHGDSNIQSIFTKLDEDKQTIEQQIYVN
                     PLKKTATNTKVDIAGSQVDDYGNIKLGNGSTIIDQNTEIKVYKVNSNQQLPQSNRIYD
                     FSQYEDVTSQFDNKKSFSNNVATLDFGNIDSAYIIKVVSKYTPTSDGELDIAQGTSMR
                     TTDNYGYYNYAGYSNFIVTSNDTGGGDGTVKPEEKLYKIGDYVWEDVDKDGVQGTDSK
                     EKPMANVLVTLTYPDGTTKSVRTDANGHYEFGGLKDGETYTVKFETPAGYLPTKENGT
                     TDGEKDSNGSSVTVKINGKDDMSLDTGFYKEPKYNLGDYVWEDTNKDGIQDANEPGIK
                     DVKVTLKDSTGKVIGTTTTDASGKYKFTDLDNGNYTVEFETPAGYTPTVKNTTAEDKD
                     SNGLTTTGVIKDADN"
BASE COUNT         1294 a          447 c          511 g          836 t
ORIGIN      
        1 ttcagattcg gatagcgact cagattcaga taacgattca gattcagata gcgattcaga
       61 ctcaaatgca ggtaaacata caccggctaa accaatgagt gaagttaaag accatcacaa
      121 taaagcgaaa gcattaccgg aaacaggtag tgaaaataat aattcaaata atggcacatt
      181 attcggtgga ttattcgcgg cattaggatc attattgtta ttcggtcgtc gtaaaaaaca
      241 aaataaataa tattattaac ttaaccaggt ccgtgaggcc tggttttttt atttcaaaat
      301 ttatgaaatg tatcttatgt ttgagattaa atagtgcgat gttttaaaaa atataacata
      361 aatcaacata aatttaattc atctttacat taaaagtaca aacgaataag aaaagcaatt
      421 aaacacagta tcaaaccatt taaaacaatt gatataaaaa aacaaacgaa taattaaaca
      481 ttactagaat taatttattc aaaccaaagt gtaaaataac ggtcttagat aaataaattt
      541 atttaaagta ttgtgcttta tctaaaaatg tattacgatg ggaatacaaa tttttatatg
      601 taaaaatatt aattttttgc aaatattgat attttaaagg agatttatat gattaacagg
      661 gataataaaa aggcaataac aaaaaagggt atgatttcaa atcgcttaaa caaattttcg
      721 attagaaagt atactgtagg aactgcatcg attttagtag gtacgacatt gatttttggt
      781 ctagggaacc aagaagctaa agctgctgaa aacactagta cagaaaatgc aaaacaagat
      841 gatgcaacga ctagtgataa taaagaagta gtgtcagaaa ctgaaaataa ttcgacaaca
      901 gaaaataatt caacaaatcc aattaagaaa gaaacaaata ctgattcaca accagaagct
      961 aaagaagaat caactacatc aagtactcaa caacagcaaa ataacgttac agctacaact
     1021 gaaactaagc ctcaaaacat tgaaaaagaa aatgttaaac cttcaactga taaaactgcg
     1081 acagaagata catctgttat tttagaagag aagaaagcac caaataatac aaataacgat
     1141 gtaactacaa aaccatctac aagtgaaact caaacaaaac caactacacc tcaagaatct
     1201 acaaatattg aaaattcaca accgcaacca acgccttcag aagtagacaa tcaagttaca
     1261 gatgcaacta atccaaaaga accagtaaat gtgtcaaaag aagaacttaa aaataatctt
     1321 gagaaattaa aagaattagt tagaaatgat agcaatacag atcgttcaac taaaccagtt
     1381 gctacagctc caacaagtgt tgcaccaaaa cgtgtaaacg caaaaatgcg ctttgcagtt
     1441 gcacaaccag cagcagttgc ttcaaacaat gttaatgatt taattaaagt gacgaagcaa
     1501 acaatcaaag ttggcgatgg taaagataat gtggcagcag cgcatgacgg taaagatatt
     1561 gaatatgata cagagtttac aattgacaat aaagtcaaaa aaggcgatac aatgacgatt
     1621 aattatgata agaatgtaat tccttcggat ttaacagata aaaatgatcc tatcgatatt
     1681 actgatccat caggagaggt cattgctaaa ggaacatttg ataaagcaac taagcaaatc
     1741 acatatacat ttacagacta tgtagataaa tatgaagata taaaatcacg cttaactcta
     1801 tattcgtata ttgataaaaa aacagttcca aatgagacaa gtttgaattt aacatttgct
     1861 acagcaggta aagaaacaaa tcaaaatgtc actgttgatt atcaagatcc aatggttcat
     1921 ggtgattcaa acattcaatc tatctttaca aaattagatg aagataagca aactattgaa
     1981 caacaaattt atgttaatcc tttgaaaaaa acagcaacta acactaaagt tgatatagct
     2041 ggtagtcaag tagatgatta tggaaatatt aaactaggaa atggtagcac cattattgac
     2101 caaaatacag aaataaaggt ttataaagtt aactctaatc aacaattgcc tcaaagtaat
     2161 agaatctatg attttagtca atacgaagat gtaacaagtc aatttgataa taaaaaatca
     2221 tttagtaata atgtagcaac attggatttt ggcaatattg attcagctta tatcattaaa
     2281 gtagttagta aatatacacc tacatcagat ggtgagctag atattgctca aggtactagt
     2341 atgagaacaa ctgataatta tggttattat aattatgcag gatattcaaa cttcatcgta
     2401 acttctaatg acactggtgg tggtgacggt actgttaaac ctgaagaaaa gttatacaaa
     2461 attggtgact atgtatggga agacgttgat aaagacggtg ttcaaggtac agattcaaaa
     2521 gaaaagccaa tggcaaacgt tttagttaca ttaacttacc cggacggtac tacaaaatca
     2581 gtaagaacag atgctaatgg tcattacgaa ttcggtggtt tgaaagacgg agaaacttat
     2641 acagttaaat tcgaaacgcc agctggatat cttccaacaa aagaaaatgg aacaactgat
     2701 ggtgaaaaag actcaaatgg tagttctgta actgttaaaa ttaatggtaa agatgatatg
     2761 tctttagaca ctggttttta taaagaacct aaatataatc ttggtgacta tgtatgggaa
     2821 gatacgaata aagatggtat ccaagatgct aatgaacctg gtatcaaaga tgttaaggtt
     2881 acattaaaag atagtactgg aaaagttatt ggtacaacta ctactgatgc ctcgggtaaa
     2941 tataaattta cagatttaga taatggtaac tatacagtag aatttgaaac accagcaggt
     3001 tacacgccaa cggttaaaaa cactacagct gaagataaag attctaatgg tttaacaaca
     3061 acaggtgtta ttaaagatgc agataatt
//
LOCUS       DALMNS010000151         3005 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.151, whole genome shotgun sequence.
ACCESSION   DALMNS010000151 DALMNS010000000
VERSION     DALMNS010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 3005)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3005)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3005
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.151"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            140..982
                     /gene="mreC"
                     /locus_tag="O6Y56_002496"
     CDS             140..982
                     /gene="mreC"
                     /locus_tag="O6Y56_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDB5575730.1"
                     /translation="MLKFFKNNKLIVVLCAIIVFIALIGLSIRSQSQSPPEQYIGDSV
                     SFGQRVVSYPVNFVAGTIGDFFKKGDSKESKNKISQLESKNQQLEAENEKLKKELDLK
                     DISKFDPISTTVLARNPDQWMNTIVIDKGSKSGITSNMAVMTSQGFVGRVTKVNKFSS
                     QVDLISTNTRAGKLSVNIQHGSKNIFGLIDRYDEKNSELVISDINNRDNISKGDKVVT
                     SGLADQLPSNLYIGEVTKVQNDQYGLAKEVRVKTGADLTDLSHVYVAKRDPKTIPDDE
                     SRDK"
     gene            982..1512
                     /gene="mreD"
                     /locus_tag="O6Y56_002497"
     CDS             982..1512
                     /gene="mreD"
                     /locus_tag="O6Y56_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HDB5575731.1"
                     /translation="MRTLYYFLIGILLFYIDTAIGLLIPMHIGKFELVFVPHLTFMYI
                     LMMVVYRGFGVSLLLSIFLGVMTDVYFGSIYGVYLFGYILFLALIDRFFKIFYKDHSM
                     LFIIILASTLLLEVYVALIYGMLGFIQFDIIHFVVFRLLPTLIMNFVLLIMLYPLIIK
                     FLKKTNNDIDMKRRQW"
     misc_feature    1539..1735
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00559"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L21 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00559"
     gene            1748..2056
                     /gene="rplU"
                     /locus_tag="O6Y56_002498"
     CDS             1748..2056
                     /gene="rplU"
                     /locus_tag="O6Y56_002498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000457386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDB5575732.1"
                     /translation="MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDTFTFDKVLFVGGD
                     SVKVGAPTVEGATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKINA
                     "
     gene            2062..2382
                     /locus_tag="O6Y56_002499"
     CDS             2062..2382
                     /locus_tag="O6Y56_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal-processing cysteine protease Prp"
                     /protein_id="HDB5575733.1"
                     /translation="MITVDITVNDEGKVTDVIMDGHADHGEHGHDIVCAGASAVLFGS
                     VNAIIGLTSERPDINYDDNGGHFHIRSVDTNNDEAQLILQTMLVSLQTIEEEYNENIR
                     LNYK"
     gene            2394..2678
                     /gene="rpmA"
                     /locus_tag="O6Y56_002500"
     CDS             2394..2678
                     /gene="rpmA"
                     /locus_tag="O6Y56_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009382703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDB5575734.1"
                     /translation="MLKLNLQFFASKKGVSSTKNGRDSESKRLGAKRADGQFVTGGSI
                     LYRQRGTKIYPGENVGRGGDDTLFAKIDGVVKFERKGRDKKQVSVYAVAE"
BASE COUNT         1050 a          405 c          568 g          982 t
ORIGIN      
        1 tttgttttta aaatgccaca aatattttac ggagttgttc attttcaaag taattcgtag
       61 ttagtgcttt atttcataat gggagtaata taaaatagaa aaggatatac aatattttga
      121 cataatagag gtgttctggg tgcttaagtt ttttaaaaat aacaaattaa ttgttgtttt
      181 atgtgcaatt atcgttttta ttgcattaat tgggctgtcc atacgttcac aatctcaatc
      241 acctcctgaa caatatatag gtgattctgt gtcttttgga caacgagttg tgagttatcc
      301 agttaatttt gttgctggta cgattgggga cttttttaaa aaaggagatt ctaaagaatc
      361 taaaaataag attagccagt tagaatctaa gaaccaacaa ttagaagcgg aaaatgaaaa
      421 attaaaaaaa gagcttgatt taaaagatat ttcaaaattt gatcctattt ctactacggt
      481 tttagcaaga aatccggatc agtggatgaa tacaattgta attgataagg gatctaaatc
      541 aggtataact tcaaatatgg ctgtgatgac atcacaaggt tttgttggaa gagttactaa
      601 agttaataaa ttttcttcac aagttgattt aatctcaact aatacacgtg cgggtaaatt
      661 atctgtaaat atacaacacg gttctaaaaa tatatttggc ttaattgatc gttatgatga
      721 aaagaactca gaacttgtta ttagtgatat taataataga gataatatct caaaaggtga
      781 taaagtcgtt acaagtggat tagctgatca actaccaagt aatttatata taggagaagt
      841 gactaaggtt caaaatgatc aatacggctt agctaaagaa gttagggtta agactggtgc
      901 agacttaaca gatttgagcc atgtttatgt tgcaaaaaga gatcctaaaa caattcctga
      961 tgatgaaagc agggataaat aatgcgtaca ctgtattatt ttttgatagg tattttacta
     1021 ttttatatag atactgcaat tgggcttctt attccaatgc acataggtaa gtttgaactt
     1081 gtgtttgtac cacaccttac atttatgtat attttaatga tggtagtgta tcgcggcttt
     1141 ggcgtatcat tattgctcag catattttta ggcgtaatga ctgatgtata ctttggtagt
     1201 atttatggag tgtacttatt tggctatata ttgtttttag cacttataga tcgattcttt
     1261 aaaatttttt acaaagatca ttcgatgtta ttcattatta tattagctag caccttatta
     1321 ttagaagtct atgtggcatt aatatacggt atgttaggat tcattcaatt tgatattatt
     1381 cattttgtag tctttagatt attgccaaca ttaattatga attttgtact gttaatcatg
     1441 ctttatccgt tgattataaa gttccttaaa aaaacaaaca atgacattga catgaaacgc
     1501 cgtcaatggt aagatgcaat agttgagtag ttataagtag ctacatacaa ccgctcaaat
     1561 ataggttcaa gaacattttt aatgaagaaa gcgattgtca atcaaggcgt tgaaggaaga
     1621 aacgagaaga gtttatcttt ataaatgact cgagttgcga ccgaaacaac gtagagtgca
     1681 aacgcttgac tcaataacga aatgtcacct atgtatggcg tgacttatta tacaggaggt
     1741 gcaaagtatg tttgctatta ttgaaacagg tggaaaacaa atcaaagtag aagaaggtca
     1801 agaaatcttc gttgaaaaat tagacgtaaa cgaaggagat acttttacat ttgataaagt
     1861 attatttgta ggtggagatt cagttaaagt tggagcgcca acagttgaag gtgcaacagt
     1921 tactgctact gttaataaac aaggtcgcgg taaaaaaatc actgtattca catacaaacg
     1981 tcgtaaaaat tcaaaacgta aaaaaggcca tcgtcaacca tacactaaat taacaatcga
     2041 taaaatcaac gcgtaattat tatgattact gttgatatta cagttaatga tgaaggcaaa
     2101 gtaacagacg ttattatgga tggccatgct gaccatggtg aacatggtca tgatatcgtt
     2161 tgtgctggag cttcagctgt attgtttggt agtgttaatg cgattatagg attgacatct
     2221 gagagaccag atatcaatta tgacgacaat ggtggtcatt ttcatataag aagcgttgat
     2281 acaaataacg atgaagcgca actaattctt caaacaatgc ttgtgtcttt acaaactatt
     2341 gaagaagaat ataatgagaa tattagatta aattataagt gaggtgcatt ccgatgttaa
     2401 aattaaactt acaattcttc gcatctaaaa aaggggtaag ttctacaaaa aacggacgtg
     2461 actctgaatc aaaacgctta ggtgctaaac gtgctgacgg tcaattcgta acaggtggtt
     2521 caattttata tcgccaacgt ggtactaaaa tttaccctgg tgaaaatgta ggtcgtggtg
     2581 gcgatgatac attattcgct aaaatcgacg gcgttgttaa attcgaacgt aaaggtcgcg
     2641 acaaaaaaca agtttctgta tatgcagtag ctgaataatt ttgtctagtt aacaccagaa
     2701 gtgaatcttc tggtgttttt tactttttat aaaacgtttt tcattattat tttcattttg
     2761 ttattaaaaa atgggaattt tagacgttat actaaatgtg caactgcata agagccccta
     2821 atcgctaaac tataaggggc taaaaggatt acagttgcag cgtttaaaga ataaactgta
     2881 ccactattgg ttctgagaaa tatcagcaat ttgagtaaag taaacttaaa agcaactgca
     2941 taagagcccc taattattta caatatataa ggggacaaag gaatacagtt gcagtataaa
     3001 aagca
//
LOCUS       DALMNS010000152         2991 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.152, whole genome shotgun sequence.
ACCESSION   DALMNS010000152 DALMNS010000000
VERSION     DALMNS010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2991)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2991)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2991
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.152"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..1418)
                     /gene="eap"
                     /locus_tag="O6Y56_002501"
                     /gene_synonym="map"
     CDS             complement(<1..1418)
                     /gene="eap"
                     /locus_tag="O6Y56_002501"
                     /gene_synonym="map"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001623710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular adherence protein Eap/Map"
                     /protein_id="HDB5575735.1"
                     /translation="MKFKSLITTTLALGVLASTGANFNNNEASAGAKPLDKSSSSLHH
                     GYSKVHVPYAITVNGTSQNILSSLTFNKNQNISYKDLEDRVKSVLKSDRGISDIDLRL
                     SKQAEYTVYFKNGAKRVIDLKAGIYTADLINTSEIKAININVDTKKHIEDKKKDKANY
                     QVPYTITVNGTSQNILSNLTFNKNQNISYKDLEDKVKSVLESNRGITDVDLRLSKQAK
                     YTVNFKNGTKKVIDLKAGIYTANLINSSDIKSININVDTKKHVENKAKRNYQVPYSIN
                     LNGTSTNILSNLSFSNKPWKNYKDLTRQIKSVLKHDRGISEQDLKYAKKAYYTVYFKN
                     GGKRILQLNSKNYTANLVHAKDVKRIEITVKTGPKAKADRYVPYTIAVNGTSTPILSK
                     LKFSGDPRVGYSDITKKVKSVLKYDRGISDRELKFAKKATYTLHFKNGKKQVVNLNSN
                     IFTPNLFSAKDIKKIDINVKQHT"
     gene            1807..2799
                     /gene="sph"
                     /locus_tag="O6Y56_002502"
     CDS             1807..2799
                     /gene="sph"
                     /locus_tag="O6Y56_002502"
                     /EC_number="3.1.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000239616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sphingomyelin phosphodiesterase"
                     /protein_id="HDB5575736.1"
                     /translation="MVKKTKSNSLKKVATLALANLLLVGALTDNSAKAESKKDDTDLK
                     LVSHNVYMLSTVLYPNWGQYKRADLIGQSSYIKNNDVVIFNEAFDNGASDKLLSNVKK
                     EYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGCGFDND
                     SNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGAGHDRKIRAEQMKEISDFVKKKNIPK
                     DETVYIGGDLNVNKGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPE
                     HLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKAYSK"
BASE COUNT          996 a          445 c          427 g         1123 t
ORIGIN      
        1 gtgtgttgtt tcacatttat atcaattttt ttaatatctt tggcactaaa taaattcggt
       61 gtaaagatgt ttgaatttaa attcactact tgtttctttc catttttaaa atgtaatgtg
      121 taagttgctt tctttgcgaa ttttaattca cgatcagaga tccccctatc gtacttcaat
      181 actgatttta cttttttagt tatatcactg tatcctacac gtgggtcacc tgaaaatttt
      241 aatttagata aaattggtgt tgatgtgcca tttactgcaa ttgtgtatgg tacatatctg
      301 tctgctttcg ctttaggtcc tgttttaaca gtaatttcaa ttctcttaac atctttcgca
      361 tgaactaagt ttgctgtgta attttttgaa tttaactgta agattctttt accaccattt
      421 ttaaaataaa cagtataata agctttctta gcatatttta aatcttgttc actaatacct
      481 ctatcatgct tcagtactga ttttatttgc ctagttaaat ctttataatt cttccaaggt
      541 ttatttgaaa atgaaagatt cgataaaatg tttgtagatg taccatttaa attaattgaa
      601 tatggaactt gatagtttct tttagcttta ttttcgacat gtttttttgt atctacgtta
      661 atattgatac ttttaatatc acttgaattt attaaattcg ctgtgtatat acctgctttc
      721 aaatcaataa ctttcttcgt tccattttta aaattaactg tatatttcgc ttgcttcgat
      781 agtcttaaat caacatcagt aatacctcta tttgattcta aaactgattt aactttgtcc
      841 tctaaatctt tgtaactaat attttgattc ttattaaatg ttaagtttga taaaatattt
      901 tggcttgtac cgttcacagt aattgtgtat ggaacttggt aatttgcttt atctttcttt
      961 ttatcttcaa tatgcttttt agtatctacg ttaatattaa tagctttaat ttcacttgta
     1021 ttaattaaat cagctgtgta aatacctgct ttcaaatcga taactctttt tgctccattt
     1081 ttaaagtaaa cagtatattc cgcttgcttc gatagtctta aatctatatc actaatacct
     1141 ctgtctgatt ttaaaactga tttaactcta tcctctaaat ctttataact aatattttga
     1201 ttcttattaa atgttaagct tgataaaata ttttggcttg taccgttcac agtgattgca
     1261 tatggaacat ggactttaga atatccatgg tgtaacgaac ttgatgattt atctaatggc
     1321 ttagctccgg cagacgcttc attattatta aagtttgcac ctgttgatgc taaaacacct
     1381 aatgctaaag ttgttgtaat caatgactta aatttcataa attatctctc ctttattatg
     1441 taattcgtaa ttgcaactta attatagcca gactttctct attttttgaa ttaactgaat
     1501 attaataata aattatcatt aacaataatt ttttaacact gttaaaagtt cttttaattt
     1561 tgattaacta attaatttac aatacctaaa atgttgtttg attttgttta tatcaagctt
     1621 caaacttaaa tgtcataaca accttcatct cttaattccg attacatttg tcaattttat
     1681 ttacagtatc tttatactca aaaaacattt acttaaaaat ataaattcga tttaataatt
     1741 aatttaaatt tagttaatca attttgcatc tattttattg taagctatat aaaaggagtg
     1801 ataatgatgg tgaaaaaaac aaaatccaat tcactaaaaa aagttgcaac acttgcatta
     1861 gcaaatttat tattagttgg tgcacttact gacaatagtg ccaaagccga atctaagaaa
     1921 gatgatactg atttgaagtt agttagtcat aacgtttata tgttatcgac cgttttgtat
     1981 ccgaattggg ggcaatataa acgtgctgat ttaatcggac aatcttctta tattaaaaat
     2041 aatgatgtcg taatattcaa tgaagcattt gataatggtg catcagataa attattaagt
     2101 aatgtaaaaa aagaatatcc ttatcaaaca cctgtactag gtcgttctca atcagggtgg
     2161 gacaaaactg aaggtagcta ctcatcaact gttgctgaag atggtggcgt agcgattgta
     2221 agtaaatatc ctattaaaga aaaaatccag catgttttca aaagcggttg tggattcgat
     2281 aatgatagca acaaaggctt tgtttataca aaaatagaga aaaatggtaa gaacgttcac
     2341 gttatcggta cacatacaca atctgaagat tcacgttgtg gtgctggaca tgatcgaaaa
     2401 attagagctg aacaaatgaa agaaatcagt gactttgtta aaaagaaaaa tatccctaaa
     2461 gatgaaacgg tatatatagg tggcgacctt aatgttaata aaggtactcc agagttcaaa
     2521 gatatgctta aaaacttgaa tgtaaatgat gttctatatg caggtcataa tagcacatgg
     2581 gaccctcaat caaattcaat tgcgaaatat aattacccta atggtaaacc agaacattta
     2641 gactatatat ttacagataa agatcataaa caaccaaaac aattagtcaa tgaagttgtg
     2701 actgaaaaac ctaagccatg ggatgtatat gcgttcccat attactacgt ttacaatgat
     2761 ttttcagatc attacccaat caaagcctat agtaaatagt gctcaactaa ctaataactc
     2821 gcttcgttct aaaaagtcta agcgagttat attgttaaaa tttgaattga ctgagtctag
     2881 gacaaaaatc aagttctagg ctctataatg ttatattggt attagttgac tgcgtggtcc
     2941 caacacagag aatttcgaaa agaaattcta caggcaatgc aagttggcgg g
//
LOCUS       DALMNS010000153         2989 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.153, whole genome shotgun sequence.
ACCESSION   DALMNS010000153 DALMNS010000000
VERSION     DALMNS010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2989)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2989)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2989
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.153"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            112..2721
                     /gene="adhE"
                     /locus_tag="O6Y56_002503"
                     /gene_synonym="adhC"
     CDS             112..2721
                     /gene="adhE"
                     /locus_tag="O6Y56_002503"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HDB5575737.1"
                     /translation="MLTIPEKENRGSKEQEVAIMIDALADKGKKALEALSKKSQEEID
                     HIVHQMSLAAVDQHMVLAKLAHEETGRGIYEDKAIKNLYASEYIWNSIKDNKTVGIIG
                     EDKEKGLTYVAEPIGVICGVTPTTNPTSTTIFKAMIAIKTGNPIIFAFHPSAQESSKR
                     AAEVVLEAAMKAGAPKDIIQWIEVPSIEATKQLMNHKGIALVLATGGSGMVKSAYSTG
                     KPALGVGPGNVPSYIEKTAHIKRAVNDIIGSKTFDNGMICASEQVVVIDKEIYKDVTN
                     EFKAHQAYFVKKDELQRLENAIMNEQKTGIKPDIVGKSAVEIAELAGIPVPENTKLII
                     AEISGVGSDYPLSREKLSPVLALVKAQSTKQAFQICEDTLHFGGLGHTAVIHTEDETL
                     QKDFGLRMKACRVLVNTPSAVGGIGDMYNELIPSLTLGCGSYGRNSISHNVSATDLLN
                     IKTIAKRRNNTQIFKVPAQIYFEENAIMSLTTMDKIEKVMIVCDPGMVEFGYTKTVEN
                     VLRQRTEQPQIKIFSEVEPNPSTNTVYKGLEMMVDFQPDTIIAFGGGSAMDAAKAMWM
                     FFEHPETSFFGAKQKFLDIGKRTYKIGMPENATFICIPTTSGTGSEVTPFAVITDSET
                     NVKYPLADFALTPDVAIIDPQFVMSVPKSVTADTGMDVLTHAMESYVSVMASDYTRGL
                     SLQAIKLTFEYLKSSVEKGDKVSREKMHNASTLAGMAFANAFLGIAHSIAHKIGGEYG
                     IPHGRANAILLPHIIRYNAKDPQKHALFPKYEFFRADTDYADIAKFLGLKGNTTEALV
                     ESLAKAVYELGQSVGIEMNLKSQGVSEEELNESIDRMAELAFEDQCTTANPKEALISE
                     IKDIIQTSYDYKQ"
BASE COUNT         1107 a          458 c          567 g          857 t
ORIGIN      
        1 caaataatat tcgaaattaa acttttttgt atagaatttt ctttatatcc tgagagacat
       61 gtactataat gtttgtgaaa taattcacaa agtataaagg agtggttgta tatgttaact
      121 atacctgaaa aagaaaatcg tggatcgaaa gaacaagaag tggcaattat gattgatgct
      181 ctagctgaca aagggaaaaa agcattagaa gcattatcta aaaagtcaca agaagaaatt
      241 gatcatattg ttcatcaaat gagtttagca gctgttgatc aacatatggt gctagcaaaa
      301 ttagcacatg aagaaactgg aagaggtata tacgaagata aagcgattaa aaatttatac
      361 gcttctgaat atatatggaa ttcaataaaa gacaataaga cagtagggat tattggtgaa
      421 gataaagaaa aaggattaac gtatgtagcg gaaccaattg gtgttatttg tggtgttacg
      481 ccaacaacaa atcctacgtc gacaactatt tttaaagcga tgattgcaat taagacagga
      541 aatccaatta tttttgcatt ccatccaagt gcgcaagaat cgtcgaagcg tgcagcagaa
      601 gttgtattag aagcggcaat gaaggcaggt gcacctaaag atattattca gtggattgaa
      661 gtaccttcta tcgaagcaac aaaacaatta atgaatcaca aaggtattgc attagttcta
      721 gcaacaggtg gttcgggcat ggttaagtct gcatattcaa ctggtaaacc ggcattaggt
      781 gtgggaccag gtaacgtgcc gtcttacatt gaaaaaacag cacacattaa acgtgcagta
      841 aatgatatca ttggttcaaa aacatttgat aatggtatga tttgtgcttc tgaacaagtt
      901 gtagtcattg ataaagaaat ttataaagat gttactaatg aatttaaagc acatcaagca
      961 tactttgtta aaaaagatga attacaacgc ttagaaaatg caattatgaa tgaacaaaaa
     1021 acaggtatta agcctgatat tgtcggtaaa tctgcagttg aaatagctga attagcaggt
     1081 atacctgtcc ccgaaaatac aaaacttatc atagccgaaa ttagcggtgt aggttcagac
     1141 tatccgttat ctcgtgaaaa attatctcca gtattagcct tagtaaaagc ccaatctaca
     1201 aaacaagcat ttcaaatttg tgaagacaca ctacattttg gtggattagg acacacagcc
     1261 gttatccata cagaagatga aacattacaa aaagattttg gactaagaat gaaagcttgt
     1321 cgtgtacttg taaatacacc atcagcggtt ggaggtattg gtgatatgta taacgaattg
     1381 attccgtctt taacattagg ttgtggttcg tacggtagaa actcaatttc acataatgtt
     1441 agtgcgacag atttattaaa cataaaaaca attgctaaac gacgtaataa tactcaaatt
     1501 ttcaaggtgc ctgctcaaat ttattttgaa gaaaatgcaa tcatgagtct aacaacaatg
     1561 gacaagattg aaaaagtgat gattgtctgt gaccctggta tggtcgaatt cggttataca
     1621 aaaacagttg agaatgtatt aagacaaaga acggaacagc ctcaaattaa aatatttagc
     1681 gaagtcgaac cgaatccatc aactaataca gtatataaag gtctggaaat gatggttgat
     1741 ttccaaccgg atacaatcat tgcatttggt ggtggttcag cgatggatgc tgcaaaagca
     1801 atgtggatgt tctttgaaca ccctgagaca tcattcttcg gtgctaaaca aaagttccta
     1861 gacatcggta aacgtactta taaaataggc atgcctgaaa atgcgacgtt catttgtatc
     1921 cctacgacat caggtacagg ttcagaagta acaccatttg cagttatcac agatagtgaa
     1981 acaaatgtaa aatatccgtt ggctgatttt gctttaacac ctgatgttgc aattattgac
     2041 cctcaatttg tgatgagtgt gccaaaaagc gttacagcag atacaggaat ggatgtacta
     2101 acgcatgcaa tggaatcata tgtatctgta atggcttcag attacacaag aggtttgagt
     2161 ctacaagcga ttaaattgac gttcgaatat ttaaaatcat ctgttgaaaa aggtgataaa
     2221 gtttcaagag agaaaatgca taacgcatca actttggctg gtatggcatt tgcaaatgca
     2281 ttcttaggca ttgcacactc aattgcgcat aaaattggtg gggaatatgg tattccgcat
     2341 ggtagagcga atgcgatatt actaccgcat attatccgtt ataatgccaa agacccgcaa
     2401 aaacatgcat tattccctaa atatgagttc ttcagagcag atacagatta tgcagatatt
     2461 gccaaattct taggattaaa aggtaatacg acagaagcac tcgtagaatc attagctaaa
     2521 gctgtctacg aattaggtca atcagtcgga attgaaatga atttgaaatc acaaggtgtg
     2581 tctgaagaag aattaaatga gtcaattgat agaatggcag agctcgcatt tgaagatcag
     2641 tgtacaactg ctaatcctaa agaagcacta atcagtgaaa tcaaagatat cattcaaaca
     2701 tcatatgatt ataagcaata atctatctga taataatcat ctaactcacc tgaaattaca
     2761 aaagtaaaaa aatgccacat aaactttaag tcgataatca ttatatggtt atcggctttt
     2821 atttattgcc aaatcttcag agagatacaa actagacaat cattttttaa ataaagaaaa
     2881 tattaagatt gatactcatt tcacaaaata ttactacttt agagtataat tatttttaat
     2941 ttcatataaa taaaaaggcg aaaataatgc ggtttaaaag taattaatt
//
LOCUS       DALMNS010000154         2904 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.154, whole genome shotgun sequence.
ACCESSION   DALMNS010000154 DALMNS010000000
VERSION     DALMNS010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2904
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.154"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            444..797
                     /locus_tag="O6Y56_002504"
     CDS             444..797
                     /locus_tag="O6Y56_002504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3147 family protein"
                     /protein_id="HDB5575738.1"
                     /translation="MFSIGSAILHFVIGGIAVALASIIADKVGGKLGGIIATMPAVFL
                     AAIIALALDHRGTQLVEMSMNLSTGAIVGILSCILTVFLTSLYINHKGYRKGAIFTVV
                     CWFVISLAIFSIRHL"
     gene            865..1260
                     /locus_tag="O6Y56_002505"
     CDS             865..1260
                     /locus_tag="O6Y56_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3147 family protein"
                     /protein_id="HDB5575739.1"
                     /translation="MKLTLMKFFVGGFAVLLSYIVSVTLPWKEFGGIFATFPAVFLVS
                     MFITGMQYGDKVAVHVSRGAVFGMTGVLVCILVTWMMLHMTHMWLISIIVGLLSWFIS
                     AVCIFEAVEFIAQKRLEKHSWKAGKTNSK"
     gene            1511..2080
                     /locus_tag="O6Y56_002506"
     CDS             1511..2080
                     /locus_tag="O6Y56_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDB5575740.1"
                     /translation="MNLSKQIKKYRERDGYSQEYLAEKLYVSRQSISNWENDKSLPDI
                     HNLLMMCELFNVTLDDLVKGTIPFVPDIKVQRSLNLWAYVMIIFMTLAAILTGPLIVY
                     WNWAWGITVMVIYGIGYYASMKIEDFKKVHKMDNYDRIVAFMNGKDPSEVQTTKARNI
                     KTSVLSFIAFVGAIILVALISMYLANKFL"
     gene            complement(2207..2407)
                     /locus_tag="O6Y56_002507"
     CDS             complement(2207..2407)
                     /locus_tag="O6Y56_002507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001059082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDB5575741.1"
                     /translation="MNNGTVKWFNAEKGFGFIEQENGGDVFVHFSGIASDGYKTLEEG
                     QKVTFEITEGQRGDQAVNVQTV"
     gene            complement(2799..>2904)
                     /locus_tag="O6Y56_002508"
     CDS             complement(2799..>2904)
                     /locus_tag="O6Y56_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VraH family protein"
                     /protein_id="HDB5575742.1"
                     /translation="IVIVLSVVTTPIIGIPVGLLGGAYYLKRREEKGK"
BASE COUNT          940 a          411 c          568 g          985 t
ORIGIN      
        1 agttgactga acgaaaatgc gcttgtaaca agcttttttc aattctagtc aggggcccca
       61 acacagagaa tttcgaaaag aaattctaca ggcaatgcga gttggggtga gggccctaac
      121 acagaagctg acgaaaagtc agcttacaat aatgtgcaag ttggcggggc cccaacatag
      181 aagctggcgg aaagtcagct tacaataatg tgcaagttgg ggtgggacga cgaaataaat
      241 tttgcgaaaa tatcatttct gtcccactcc ctaatttgag ctggatatac ctttatttga
      301 accctttatt gctagtttat gaaagtatca tgaaagcttt atgaacatcg cttgagttgc
      361 ctttacagta gaaaatttaa gttttacact ttgtgtgaat gatacgtttt gtattgaatt
      421 aattatagaa aggtacgttg aagatgtttt caattggaag tgcaattctt cattttgtca
      481 ttggtggtat cgctgttgca ttagcttcaa ttattgctga taaggtaggc ggtaagttag
      541 gaggcattat agctactatg ccggcagtct ttcttgcggc tattatcgca ttagctttgg
      601 atcatcgtgg tacgcaatta gtggagatgt cgatgaatct tagtactgga gcaattgtcg
      661 gtattctgtc ttgtatatta actgtatttt tgacatctct ctatattaat cataaaggtt
      721 atcggaaagg cgcaatattc acagttgttt gttggtttgt tatttccctc gcaatattca
      781 gtattagaca tttatagttt ggaaaatgcg tgataattag ttgtattcag ttattaagta
      841 ataaattatt ggaggcagaa catcatgaaa ttaacattaa tgaaattttt tgtgggggga
      901 tttgcagtat tattaagtta tattgtatct gtaacactac cttggaaaga atttggtggt
      961 atatttgcaa cgtttccggc agtattttta gtgtctatgt ttattacagg tatgcaatat
     1021 ggtgataaag tcgctgtgca tgtaagtcgt ggcgcagtgt ttggtatgac aggggtatta
     1081 gtatgtattt tagttacatg gatgatgtta catatgacgc acatgtggtt gattagcatt
     1141 attgttgggc tcctaagctg gttcatcagt gcagtatgta tttttgaagc ggtagaattt
     1201 atagcacaaa aaagattaga aaagcatagt tggaaagctg gaaaaacgaa tagtaaatag
     1261 tgtgaacgta atctcttaaa taggactaac ttcgcaagca ttgaatagca gggaaaagtt
     1321 gcatcattaa taaatgaaat tcaagttggc attgagaaaa ttacaagcgc gtaatcatac
     1381 aggtctgtct taagggagtc ttcgaacctt gattttgtcg tatgtcaaaa catttagtca
     1441 atcataaagg tgactttaat taactttatc tgatagtctg attgtactaa ttgactggag
     1501 gcgtatgtaa ttgaatctga gtaaacaaat taaaaagtat agggaacgag atggttattc
     1561 acaagaatat cttgctgaaa agttatatgt atctaggcag agtatttcta attgggaaaa
     1621 tgacaaaagc ttaccagaca tacataactt attaatgatg tgcgaattgt tcaatgtaac
     1681 tttagatgat ttagtaaaag ggactattcc atttgtacct gatattaaag tgcaacgaag
     1741 tcttaactta tgggcatatg tgatgattat tttcatgaca ctagctgcaa ttttaacagg
     1801 acctttaatt gtttattgga attgggcttg gggtataacg gtgatggtca tttatggaat
     1861 aggttattat gcatctatga aaatagaaga ctttaaaaaa gtgcataaaa tggataacta
     1921 cgatcgaatt gttgctttta tgaatggaaa agatcctagt gaagtacaaa cgactaaagc
     1981 tagaaatata aaaacaagtg tactttcttt catagcattt gttggtgcaa tcattcttgt
     2041 agctttgatt agtatgtatc tggcaaataa gtttttataa atcatcgtgg tatggcctca
     2101 tattatttat attatccaaa atagcataaa aaaataccaa caagatttag aaccttgttg
     2161 gtaatcaaag cgattcattt ataatgagtc gttttatttt gtaagattaa acagtttgta
     2221 cgttaactgc ttggtctcca cgttgacctt cagtgatttc gaaagtaact ttttgacctt
     2281 cttctaaagt tttgtagcca tcgctagcga tacctgagaa atgtacgaat acgtctccgc
     2341 cattttcttg ttcgatgaaa ccaaaacctt tttctgcgtt aaaccatttt actgtaccgt
     2401 tattcatata gaaaacctcc atgtgctttt gcacttaata tttgtaacaa attcataact
     2461 aaaaaagagg atattctaaa caaatacact acaatttaat tcacgagctt ttattacgta
     2521 agtccaacta tacgctcata ttggcataat gtacagtgtt ttttgaaaat aaatttaaaa
     2581 agatttttaa aaaccttaga aacgttgatt taaaggggtt tataaaaata aaaaaatgta
     2641 gtcttttatg gtatttgttt gttttcaaag taacatatcg tttaaacatg acgattttat
     2701 aagcaattca taaaaaacaa gcagcgataa acgctacttg ttgatattaa aacctgacat
     2761 aaaaggtcaa agcaatgtaa tatactgatg gaatgcgttt atttaccttt ttcttcgcgg
     2821 cgttttaaat aataagcgcc acctaataaa ccaactggaa tacctattat tggtgttgta
     2881 actacgctta agacaataac aatc
//
LOCUS       DALMNS010000155         2898 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.155, whole genome shotgun sequence.
ACCESSION   DALMNS010000155 DALMNS010000000
VERSION     DALMNS010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2898)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2898)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2898
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.155"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..694)
                     /locus_tag="O6Y56_002509"
     CDS             complement(<1..694)
                     /locus_tag="O6Y56_002509"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDB5575743.1"
                     /translation="MAKLNVEVFADGADIEEMKAAYKNKQVDGFTTNPSLMAKAGVTD
                     YKAFAEEAVKEIPDASISFEVFADDLETMEKEAAILKQYGENVFVKIPIVNTKGESTI
                     PLIKKLSADNVRLNVTAVYTIEQVKEITEAVTEGVPTYVSVFAGRIADTGVDPLPLMK
                     EAVKVSHSKDGVKLLWASCRELFNVIQADEIGADIITCPADVVKKVNTNLGRDINELS
                     VDTVKGFAKDIQS"
     gene            952..1254
                     /locus_tag="O6Y56_002510"
     CDS             952..1254
                     /locus_tag="O6Y56_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575744.1"
                     /translation="MSRSKKYFYLSSLMIILSFFFNTNNVFLSGLFNSFIKLILFCSV
                     INSIVLILSIIFADRSIKSLKPDADWIRIASKSLPWIILIVILVHIFSIVRTFGFI"
     gene            1510..1875
                     /gene="crcB"
                     /locus_tag="O6Y56_002511"
     CDS             1510..1875
                     /gene="crcB"
                     /locus_tag="O6Y56_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HDB5575745.1"
                     /translation="MQYVYIFIGGALGALLRYLISFLNTDGGFPIGTLVANLTGAFVM
                     GLLTALTIAFFSNHPTLKKAITTGFLGALTTFSTFQLELIHMFDHQQFITLLLYAITS
                     YVFGILLCYVGIKLGGGLS"
     gene            1872..2225
                     /locus_tag="O6Y56_002512"
     CDS             1872..2225
                     /locus_tag="O6Y56_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CrcB family protein"
                     /protein_id="HDB5575746.1"
                     /translation="MISIILVMIGGGFGAIARSAITDYFNHKFTSKLPIATLIVNLVG
                     SFLIGLTIGLSISISWFPAFFVTGFLGGLTTFSTLAKELTLMMTPKFNINLFLNYSLL
                     QFIIGFIACYIGYHI"
     gene            complement(2475..>2898)
                     /locus_tag="O6Y56_002513"
     CDS             complement(2475..>2898)
                     /locus_tag="O6Y56_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDB5575747.1"
                     /translation="NIGVSNFEPEHLEALLAQVSIKPVINQVEYHPYLTQHKLKLYLA
                     AQHIVMESWSPLMNAQILNDEAIKDIAQELGKSPAQVVLRWNVQHGVVTIPKSVTPNR
                     ISENFQIFDFELSDEQMKRIDGLNQDKRIGPDPKTFEG"
BASE COUNT          886 a          502 c          398 g         1112 t
ORIGIN      
        1 aagattgaat atctttcgca aagcctttaa ctgtatctac tgataattcg ttaatatcgc
       61 gacctaagtt tgtattcact tttttcacaa catctgctgg gcatgtaata atatctgcac
      121 caatttcatc agcttgaatc acattgaata attcgcggca acttgcccat aataatttaa
      181 cgccgtcttt actatgcgaa acttttacag cctctttcat taatggtaat ggatctacac
      241 ctgtatctgc aatacgtcct gcaaatactg aaacatatgt tggcacacct tcagttactg
      301 cttcagttat ttctttaact tgttcaattg tataaacagc cgtaacgttt aatctcacat
      361 tgtcagctga aagtttttta attaaaggaa tcgttgattc accttttgta tttacaatag
      421 gaattttaac aaatacattt tcgccatatt gttttaaaat tgctgcttct ttttccatag
      481 tttctaaatc gtctgcaaat acttcaaatg aaattgaagc atctggaatt tctttcacag
      541 cttcttcagc aaaagctttg taatctgtta cgcccgcttt cgccattaaa ctaggatttg
      601 ttgtaaaacc atccacttgt ttgtttttat aagctgcttt catttcttca atatctgcac
      661 cgtccgcaaa tacttctaca tttagtttag ccatataata tagcctcctt gattcttatt
      721 aaaattttaa caacatctgc atgtcttttt cttacaacca tttgtaaaaa atgattttta
      781 tttctttgtt atataaaaca tttatatcac gcttttataa tatatagcta attttttgcc
      841 tatattttta aaaatgactt tagcaacatt gtgtcaacaa ggtaattaaa ctattgtttt
      901 atgattgttt atgatacgat atgtaaatga taaccatcca ggaggtctag catgtctcgt
      961 tcaaaaaaat acttttactt atctagctta atgattattt taagcttttt ctttaataca
     1021 aataacgttt tcctaagtgg actttttaat tcttttatta aattaatact tttctgcagt
     1081 gttattaact caattgtatt aattttatct ataatttttg cagatcgttc aattaaatca
     1141 ctaaagcctg atgcagattg gattagaatt gcgagtaaaa gtttgccttg gattattcta
     1201 atcgttattt tagtacatat cttttcaatt gttcgtacat tcggttttat ttaaaaaaga
     1261 taaaatgtca atgtagcctt aatacaaaac aatacaatgt ttcatgccat aataagtaaa
     1321 tcaatttgat gacgttgttg cgtataaaaa atattagatt ttcgaaatca taactatgca
     1381 tctaatcgct atagttatac aacaagatat aacatataat gaggtttgat aatgcatcga
     1441 caatttttgt cgtcgcgttg ccaaaacctc ttttttaaat tcaaactact tcttttcgag
     1501 gtgaaccaaa tgcaatatgt atatattttt atcggtggtg ctttaggcgc tttattacgt
     1561 tacctcattt cttttctgaa tactgacgga ggttttccaa tcggaacact ggtagccaat
     1621 ttgactggtg cctttgtaat gggattacta acagccttaa caattgcatt tttttcaaac
     1681 catccgaccc taaaaaaagc tattacgact ggttttcttg gtgctttaac gactttttca
     1741 acatttcaat tagaattaat acatatgttt gatcatcaac aatttataac tttactacta
     1801 tatgctataa caagttatgt ctttggtatt ttgttatgtt acgtcggtat aaaactaggt
     1861 ggtggtttat catgatatca atcattttag tcatgattgg cggcggtttc ggtgcaattg
     1921 ctagaagtgc cattactgat tattttaatc ataaatttac ttcaaagtta cctatcgcaa
     1981 cattgatagt aaatctagtt ggtagttttt taattggatt aactataggc ttatcaattt
     2041 caatctcatg gttccctgcg ttctttgtta ccggtttttt aggtggctta acaacattct
     2101 caacgttagc caaggaactt acactaatga tgacgccaaa atttaatatt aacctttttc
     2161 tcaattattc acttttacaa ttcatcattg gatttatagc ttgttatatt ggctatcata
     2221 tttaaaaata aaatgcttca ttcagtaaat aggtaaatta cgacaccttc ctgaacgaag
     2281 cattttttaa ttttcatgca aattttttag caccatataa tgcctatcaa aataaaacaa
     2341 tcttcgttgc cgtttaaata atgtgaatgt caataaattc tccaaactag tcgaaaataa
     2401 aaacgttaag caatattgct attacctaac gttgacaatt catctaacct tttcatcagt
     2461 tgagcgattt taatctagcc ttcaaaagtt tttggatcag gtccaattct cttatcttga
     2521 tttaaaccat caattcgctt catttgttca tctgataatt cgaaatcaaa tatttggaag
     2581 ttttcagaga ttctgtttgg tgtcaccgat ttagggattg taaccacacc atgttgcaca
     2641 ttccatctta aaacaacttg ggcaggtgac tttcctaatt cttgagcaat gtctttaatt
     2701 gcctcatcat ttaaaatttg tgcattcatc aatggtgacc aagattccat cacgatatgt
     2761 tgtgctgcca aatataattt caatttatgt tgcgttaaat atggatgata ttcaacctga
     2821 ttaattacag gtttaattga cacttgtgcc aataaagctt ccaaatgttc aggttcaaaa
     2881 ttgctgacac ctatattt
//
LOCUS       DALMNS010000156         2878 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.156, whole genome shotgun sequence.
ACCESSION   DALMNS010000156 DALMNS010000000
VERSION     DALMNS010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2878
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.156"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            114..485
                     /locus_tag="O6Y56_002514"
     CDS             114..485
                     /locus_tag="O6Y56_002514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3899 domain-containing protein"
                     /protein_id="HDB5575748.1"
                     /translation="MLKKWLGMALITPMLTFIIWVFNSHTIITYLNILFYVSLIIFIS
                     IFLILLVQEGIFDATSYGFRRLKYQMSSSKKKKSISDDPFFNPQEVKKEHYFVSTWIM
                     PLLLINILYFIMTIVLSLILV"
     gene            complement(539..1783)
                     /gene="fabF"
                     /locus_tag="O6Y56_002515"
     CDS             complement(539..1783)
                     /gene="fabF"
                     /locus_tag="O6Y56_002515"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HDB5575749.1"
                     /translation="MSQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDT
                     EPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIVAAREAVKDAQLDINENTADRI
                     GVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGA
                     TVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIET
                     ACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPE
                     GEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSS
                     TKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITY
                     AMSNSLGFGGHNAVLVFKKFEA"
     gene            complement(1795..2736)
                     /locus_tag="O6Y56_002516"
     CDS             complement(1795..2736)
                     /locus_tag="O6Y56_002516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDB5575750.1"
                     /translation="MNVGIKGFGAYAPEKIIDNAYFEQFLDTSDEWISKMTGIKERHW
                     ADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGK
                     VASMDQLAACSGFMYSMITAKQYVQSGGYHNILVVGADKLSKITDLTDRSTAVLFGDG
                     AGAVIIGEVSEGRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDAS
                     TRVVEKANLTSDDIDLFIPHQANIRIMESARERLGISKDKMSVSVNKYGNTSAASIPL
                     SIDQELKNGKLKDDDTIVLVGFGGGLTWGAMTIKWGK"
BASE COUNT          873 a          578 c          430 g          997 t
ORIGIN      
        1 gaatgattga ttttagaatt tcaataaaac tgaagaaatt aaaaaatcat tcctcaatgt
       61 ctcattttaa tgtaaactat gcgtaagagt tttctataag tgggagtgat caaatgttga
      121 aaaaatggct tggaatggca ctaataaccc caatgttaac gtttattata tgggttttta
      181 atagccatac tatcattaca tatttaaata tattgtttta tgtttcatta attattttta
      241 ttagcatatt tttgatttta cttgtacaag aaggcatttt tgatgcgaca agttatggtt
      301 ttagaagatt aaagtatcaa atgtcatctt cgaaaaagaa gaagtctatc tctgatgatc
      361 catttttcaa cccacaagag gtaaaaaaag agcattactt tgtttctaca tggataatgc
      421 ccttattatt aataaatatt ttatatttta ttatgacgat tgtgctgtcg ctcatcttag
      481 tataaagaaa cagaaaaatc ttcagtaact aaaacaacgt tactgaagat ttttataatt
      541 atgcttcaaa tttcttgaat actaatactg cgttatgtcc accgaatcct aagctattac
      601 tcattgcata agtaatatca aggtcttgcg cttcatttgg aacaatatcc aaatcacatt
      661 ctggatctgg tgttaccgca tgaattgtcg gtgcgacttt agagtcttta attgaaagcg
      721 ctgagaagat tgcttcaatt ccacctgttg caccaagtaa gtgaccagtc attgattttg
      781 ttgagctaac ttttaagtgt ttagctgctt caccaaatgt atttttaata gctttaactt
      841 catttaagtc accaacagga gtacttgtac catgggcatt taagtattgt acatctttag
      901 gttcaatacc agcatcatcc atagctgctt gcattgctct agaaccgcct tcaccttctg
      961 gagctggcgc tgtaatatga taagcatcac ctgtagtacc atagccaact atctcagcat
     1021 aaatattggc acctcgagct tgtgctgatt ctaaagattc gatcactaaa ataccagcac
     1081 cttcacccat aacaaaaccg tctctacctt cttggaatgg acgacatgct gtttcaatgt
     1141 catcatttgt agaaagcgct cgacttgcac tgaaacctgc aattgccata tgagtaattg
     1201 gagcttccgt accaccagta atcattgcat ctgcatcacc gcgttgcaca attttaaatg
     1261 cttctccgat tgagtttgta ccagttgcac atgctgtaac tgttgcacca tttggtcctt
     1321 ttgcacctaa gtcaatggat acttgcccag ttgccatatc aggaattaac attggtacga
     1381 aaaatggact cacacgtctt gggcctttat ccattaattg tttatgtgca atttcaaatg
     1441 tttccatacc accgatacca gaaccaatcc atacaccgat tcgatctgca gtattttcat
     1501 tgatatctaa ttgcgcatct ttaacagcct ctctagctgc tacaattgca tattgagtaa
     1561 atctatccat acgacgcgct tcttttttgt cgatatgatc ttcaatatta aagtttttaa
     1621 gttctcctgc taagtgaacg ctataaggtt cagtatcgat acgtgtaatt ttatcgatac
     1681 catttacgcc ttttagagca ttctcccatg ttgttttgac atcattaccg attggagaaa
     1741 gggctcccat acctgtaata actactcttt tattttgact cattcgttat cctcctattt
     1801 tccccatttt attgtcattg cgccccaagt taggccgcca ccgaatccga caagaacaat
     1861 tgtatcatca tctttgagtt taccattttt taattcttga tcgatactta aaggtattga
     1921 cgcagctgaa gtatttccat atttatttac agaaacactc attttgtctt ttgaaatacc
     1981 taagcgttct ctagctgatt ccataattct aatattagct tgatgaggaa taaataaatc
     2041 tatatcatct gatgttaaat tcgctttttc aactacacgt gttgatgcat cacccataat
     2101 tctaacagca aatttaaata cttctcgacc attcattttc agtttaccag tatctttatc
     2161 taaatataaa tgtttaccac cagtgccatc agaacccatt tcataactta taatacctct
     2221 gccttctgaa acttcaccga tgataaccgc acctgcacca tctccaaata gaactgcagt
     2281 agaacggtca gttaaatctg ttattttaga taatttatct gcaccgacaa ctaaaatatt
     2341 atgataacct ccagattgaa catattgttt agctgtaatc attgaataca taaatccaga
     2401 acatgctgct agttgatcca tagaggcaac tttgcccgtc cctaaacgtt cttgcaacat
     2461 atttgcaaca gttggaaatg gcatatctcc agttgctgtg gcaacaatta tcatatctat
     2521 atcttcgggc tgaataccag cgtcagcgat tgcttttaca cttgcttcat atgctaaatc
     2581 tgaagtatct tgatcgtcat ctgcccaatg tctttcttta attccagtca tcttagaaat
     2641 ccattcatca gatgtatcta aaaattgctc aaaataggca ttgtcaataa tcttttctgg
     2701 cgcatatgca ccaaaacctt taatacccac gttcatagtt gaacaccttc ttaataaaat
     2761 ttttaatacc aggtattaat ttaacataga ttacttttta aactcaagtc agaggtagga
     2821 atattgacta gttaataaaa ttttaatgct ttattatcgt caaatttcag tatgaaat
//
LOCUS       DALMNS010000157         2847 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.157, whole genome shotgun sequence.
ACCESSION   DALMNS010000157 DALMNS010000000
VERSION     DALMNS010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2847)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2847)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2847
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.157"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            103..633
                     /locus_tag="O6Y56_002517"
     CDS             103..633
                     /locus_tag="O6Y56_002517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDB5575751.1"
                     /translation="MQIRQIHQHDFAQVDQLIRTAFENSEHGYGNESELVDQIRLSDT
                     YDNNLELVAVLQNEVVGHGLLSEVYLDNEAQREIGLVLAPVSVDIHHQNKGIGKRLIQ
                     ALEREAILKGYNFISVLGWPTYYANLGYQRASMYDIYPPYDGITDEAFLIKELKLNSL
                     AGKTGTINYTSAFEKI"
     gene            895..>2847
                     /gene="clfA"
                     /locus_tag="O6Y56_002518"
     CDS             895..>2847
                     /gene="clfA"
                     /locus_tag="O6Y56_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MSCRAMM family adhesin clumping factor ClfA"
                     /protein_id="HDB5575752.1"
                     /translation="MNMKKKEKHAIRKKSIGVASVLVGTLIGFGLLSSKEADASENSV
                     TQSDSASNESKSNDSSSVNAAPKTDNTNVSDTKTTSNTNNGETSVAQYLAQQETTQSV
                     STNATTEETPVTGEATTATNQANTPATTQSSNTNAEELVNQTSNETTSNDTNTVSSVN
                     SPQNSTNAENVSTTQDTSTEATPSNNESAPQSTDASNKDVVNQAVNTSAPRMRAFSLA
                     AVAADAPAAGTDITNQLTNVTVGIDSGTTVYPHQAGYVKLNYGFSVPNSAVKGDTFKI
                     TVPKELNLNGVTSTAKVPPIMAGDQVLANGVIDNDGNVIYTFTDYVNTKDDVKATLTM
                     PAYIDPENVTKTGNVTLATGIGSTTANKTVLVDYEKYGKFYNLSIKGTIDQIDKTNNT
                     YRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVN
                     PENFEDVTNSVNITFPNPNQYKVEFPTDDDQITTPYIVVVNGHIDPNSKGDLALRSTL
                     YGYNSNIIWRSMSWDNEVAFNNGSGSGDGIDKPVVPEQPDEPGEIEPIPEDSDSDPGS
                     DSGSDSGSDSNSDSGSDSGSDSTSDSDSDSDSDSDSASDSDSASDSDSASDSTSDSDS
                     DSASDSDSASDSDSASDSDSDSDSDSD"
BASE COUNT         1047 a          446 c          555 g          799 t
ORIGIN      
        1 atatcattca attttaatga aataatggcg tcattactat aaaatattac tttatgttgt
       61 aatgcatttt tctttaagat agaactaaaa ggaggggcaa agatgcaaat tagacaaata
      121 catcaacatg actttgctca agttgaccag ttaattagaa cggcatttga aaatagtgaa
      181 catggttatg gtaatgaatc agaactagta gaccaaattc gtctaagtga tacgtatgac
      241 aataacttag aattagtagc tgttcttcaa aatgaagttg tagggcacgg tttactaagt
      301 gaagtttatc ttgataacga ggcacaacgg gaaattggat tagtgttagc acctgtatct
      361 gttgatattc atcatcaaaa taaaggtatc gggaagcgat tgattcaagc attagaacga
      421 gaagcaatat taaaaggata taattttatc agtgtattag gatggccgac gtattatgcc
      481 aatctaggat accaacgcgc aagtatgtac gacatttatc caccatatga tgggataaca
      541 gatgaagcgt ttttaattaa agaattaaaa ttgaacagtt tagcgggaaa aacaggtacc
      601 ataaattaca catctgcttt tgaaaaaata tgattgcaag ctaggattac attaggcagt
      661 tcatattaat aatacaaatt gtttgcaatg aaatcgtacg ttgtcgtttg taaattttta
      721 aaatagcaat aaataaaatg tttgttagta aagtattatt gcagataata aaatatcgat
      781 acaaattaat tgctgtaatg caattttagt gtataattgc attaatggag attaaatata
      841 tctttaaagg gtatacagtt aatataaaat aactttttaa aaagagggaa taaaatgaat
      901 atgaagaaaa aagaaaaaca cgcaattcgg aaaaaatcga ttggcgtggc ttcagtgctt
      961 gtaggtacgt taatcggttt tggactactc agcagtaaag aagcagatgc aagtgaaaat
     1021 agtgttacgc aatctgatag cgcaagtaac gaaagcaaaa gtaatgattc aagtagcgtt
     1081 aatgctgcac ctaaaacaga caacacaaac gtgagtgata ctaaaacaac gtcaaacact
     1141 aataatggcg aaacgagtgt ggcgcaatat ctagcacaac aggaaacgac acaatcagta
     1201 tcaacaaatg caactacgga agaaacaccg gtaactggtg aagctactac ggcaacgaat
     1261 caagctaata caccggcaac aactcaatca agcaatacaa atgcggagga attagtgaat
     1321 caaacaagta atgaaacgac ttctaatgat actaatacag tatcatctgt aaattcacct
     1381 caaaattcta caaatgcgga aaatgtttca acaacgcaag atacttcaac tgaagcaaca
     1441 ccttcaaaca atgaatcagc tccacagagt acagatgcaa gtaataaaga tgtagttaat
     1501 caagcggtta atacaagtgc gcctagaatg agagcattta gtttagcggc tgtagctgca
     1561 gatgcaccgg cagctggcac agatattacg aatcagttga cgaatgtgac agttggtatt
     1621 gactctggta cgactgtgta tccgcaccaa gcaggttatg tcaaactgaa ttatggtttt
     1681 tcagtgccta attctgctgt taaaggtgac acattcaaaa taactgtacc taaagaatta
     1741 aacttaaatg gtgtaacttc aactgctaaa gtgcctccaa ttatggctgg agatcaagta
     1801 ttggcaaatg gtgtaatcga taatgatggt aatgttattt atacatttac agactatgta
     1861 aatactaaag atgatgttaa agcaactttg actatgcccg cttatattga ccctgaaaat
     1921 gttacaaaga caggtaatgt gacattggct actggcatag gtagtacaac agcaaacaaa
     1981 acagtattag tagattatga aaaatatggt aagttttata acttatctat taaaggtaca
     2041 attgaccaaa tcgataaaac aaataatacg tatcgtcaga caatttatgt caatccaagt
     2101 ggagataacg ttattgcgcc ggttttaaca ggtaatttaa aaccaaatac ggatagtaat
     2161 gcattaatag atcagcaaaa tacaagtatt aaagtatata aagtagataa tgcagctgat
     2221 ttatctgaaa gttactttgt gaatccagaa aactttgagg atgtcactaa tagtgtgaat
     2281 attacattcc caaatccaaa tcaatataaa gtagagtttc caacagacga tgatcaaatt
     2341 acaacaccgt atattgtagt tgttaatggt catattgatc cgaatagcaa aggtgattta
     2401 gctttacgtt caactttata tgggtataac tcgaatataa tttggcgctc tatgtcatgg
     2461 gacaacgaag tagcatttaa taacggatca ggttctggtg acggtatcga taaacctgtt
     2521 gttcctgaac aacctgatga gcctggtgaa attgaaccaa ttccagagga ttcagattct
     2581 gacccaggtt cagatagtgg ttcagattct ggcagcgatt ctaattcaga tagcggttca
     2641 gattcgggta gtgattctac atcagatagt gattcagatt cagatagtga ttcagattca
     2701 gcaagcgatt cagattcagc gagcgattca gattcagcaa gtgattctac atcagatagt
     2761 gattcagatt cagcaagtga ttccgattca gcgagtgatt cagattcagc aagcgattcc
     2821 gactccgaca gtgactccga ctcagat
//
LOCUS       DALMNS010000158         2766 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.158, whole genome shotgun sequence.
ACCESSION   DALMNS010000158 DALMNS010000000
VERSION     DALMNS010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2766)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2766)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2766
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.158"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            196..891
                     /locus_tag="O6Y56_002519"
     CDS             196..891
                     /locus_tag="O6Y56_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL2"
                     /protein_id="HDB5575753.1"
                     /translation="MKMKNIAKISLLLGILATGVNTTTEKPVHAEKKPIVISENSKKL
                     KSYYTQPSIEYKNVTGYISFIQPSIKFMNIIDGNSVNNIALIGKDKQHYYTGVHRNLN
                     IFYVNEDKRFEGAKYSIGGITSANDKAVDLIAEARVIKEDHTGEYDYDFFPFKIDKEA
                     MSLKEIDFKLRKYLIDNYGLYGEMSTGKITVKKKYYGKYTFELDKKLQEDRMSDVINV
                     TDIDRIEIKVIKA"
     gene            1182..2252
                     /locus_tag="O6Y56_002520"
     CDS             1182..2252
                     /locus_tag="O6Y56_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL3"
                     /protein_id="HDB5575754.1"
                     /translation="MKMRTIAKTSLALGLLTTGAITVTTQSVKAEKVQSTKVDKVPTL
                     KAERLAMINITAGANTATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEA
                     QKSNNISTTPVPKQEQSQTTTEPTTPKTKVTTPQSINTPQPMQSTKSDTPQSPTIKQA
                     QTDMTPKYEDLRSYYTKPSFEFEKQFGFMLKPWTTVRFMNVIPNRFIYKIALVGKDEK
                     KYKDGPYENIDVFIVLEDNKYQLKKYSVGGITKTNSKKVDHKAELSITQENNQGTISR
                     DVSEYMITKEEISLKELDFKLRKQLIEKHNLYGNMGSGTIVIKMKNGGKYTFELHKKL
                     QEHRMADVIEGTNIDKIEVNIK"
     gene            2371..2508
                     /locus_tag="O6Y56_002521"
     CDS             2371..2508
                     /locus_tag="O6Y56_002521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575755.1"
                     /translation="MFVKVAFLCLKSDETSNVPSVESHQNQFYLTNIMDFLIYLTMIQ
                     I"
     gene            2617..>2766
                     /locus_tag="O6Y56_002522"
     CDS             2617..>2766
                     /locus_tag="O6Y56_002522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein"
                     /protein_id="HDB5575756.1"
                     /translation="MKITTIAKTSLALGLLTTGVITTTTQAANATTPSSIKVETPQPT
                     PNATTP"
BASE COUNT         1141 a          426 c          455 g          744 t
ORIGIN      
        1 agggtcaaag ttacctgaca acacacgcaa tcacacgcag tactcattat cttttgctta
       61 aatagcttaa tcatatttta tgaatagtta aaaacaggtt aatgtgaata tctgaataca
      121 gctcctataa tatgggtgta tggttcaaat tacgtaataa aacaatctaa ttataatata
      181 ttggagcata caactatgaa aatgaaaaat attgcaaaaa taagtttgtt attaggaata
      241 ttagcaacag gtgtaaacac tacaacggaa aaaccagttc atgccgaaaa gaaacctatt
      301 gtaataagtg aaaatagcaa aaaattaaaa tcgtactata ctcaacctag tattgaatat
      361 aaaaatgtga caggttatat cagtttcatt caaccaagta ttaaatttat gaatatcata
      421 gatggtaatt ctgttaataa tattgcttta attggcaaag ataagcaaca ttattatacg
      481 ggtgtacatc gtaatcttaa tatattttac gttaatgagg ataagagatt tgaaggtgca
      541 aagtactcta ttgggggtat cacaagtgca aacgataaag ctgtcgactt aatagcagaa
      601 gcaagagtta ttaaagaaga tcatactggt gaatatgatt atgacttttt cccatttaaa
      661 atagataaag aagcaatgtc attgaaagag attgatttta aattaagaaa ataccttatt
      721 gataattatg gtctttacgg tgaaatgagt acaggaaaga ttaccgtcaa aaagaaatac
      781 tatgggaagt atacatttga attggataaa aagttacaag aagaccgtat gtccgatgtt
      841 atcaatgtta cagatattga tagaattgaa atcaaagtta taaaagcata acacatatac
      901 ttgatgacga aataagttga aattgaaata gagaggttaa gtgacgatta aacgttgctt
      961 aacttctttt taatgcttaa aaatcatttc aaaggcacat agaagcgcta tattaatctc
     1021 aaaagcactc attatttttt gcttaaatta cttaataata cttcaataat tgttaaaagg
     1081 ggtttaatgt gattatctta gtacgccatc tataatgatg ttgtatgatt caaattacgt
     1141 aaaaagacaa tcgaatataa tatagattgg agcatacaat tatgaaaatg agaacaattg
     1201 ctaaaaccag tttagcacta gggcttttaa caacaggcgc aattacagta acgacgcaat
     1261 cggtcaaagc agaaaaagta caatcaacta aagttgacaa agtaccaacg cttaaagcag
     1321 agcgattagc aatgataaac ataacagcgg gtgcaaatac agcgacaaca caagcagcta
     1381 acacaagaca agaacgcacg cctaaactcg aaaaggcacc aaatactaat gaggaaaaaa
     1441 cttcagcttc caaaatagaa aaaatatcac aacctaaaca agaagcgcag aaatcgaata
     1501 atatatcaac aacgccagtg cctaaacaag aacaatcaca aacgacaacc gaacccacaa
     1561 cgccgaaaac taaagtgaca acacctcaat caataaacac gccacaacca atgcaatcta
     1621 ctaaatcaga cacaccacaa tctccaacca taaaacaagc acaaacagat atgactccta
     1681 aatatgaaga tttaagatcg tattatacga aaccgagttt tgaatttgaa aagcagtttg
     1741 gatttatgct caaaccatgg acgacggtta ggtttatgaa tgttattcca aataggttca
     1801 tctataaaat agctttagtt ggaaaagatg agaaaaaata taaagatgga ccttacgaaa
     1861 atatcgatgt atttatcgtt ttagaagaca ataaatatca attgaaaaaa tactctgtcg
     1921 gtggtatcac gaagactaat agtaaaaaag ttgatcacaa agcagaatta agcattactc
     1981 aagaaaataa tcaaggcacg atttcacgcg atgtttcaga atacatgatt actaaggaag
     2041 agatttcctt gaaagagctt gattttaaat tgagaaaaca acttattgaa aaacataatc
     2101 tttacggtaa catgggttca ggaacaatcg ttattaaaat gaaaaacggt ggaaagtata
     2161 cgtttgaatt acacaaaaaa ctgcaagagc atcgtatggc agatgtcata gaaggtacaa
     2221 acattgataa aattgaagtg aatataaaat aatcatgacg ttctctaaat agaagctgac
     2281 atcggtaaaa caagaagtta agtgacaatg gtttacatgt tgcttagctt cttttattat
     2341 gcgcaatgat gtaaaaagac gaatattcat ttgtttgtaa aagtggcatt tctatgtctt
     2401 aaaagtgacg aaacctcaaa tgtgccaagt gttgaatcac atcaaaatca gttttattta
     2461 acgaacatta tggatttctt aatttactta acgatgattc aaatatagtt aaacaaggtt
     2521 taatgtgaat ggagcaatac gccatctata ataaagctgt atgattcaat gaatgtaatc
     2581 gaacaaatct aataattacg aatggagcat acaactatga aaataacaac aattgctaaa
     2641 acaagtttag cactagggct tttaacaaca ggtgtaatca caacgacaac gcaagcagca
     2701 aacgcgacaa caccatcttc aattaaagtg gaaacaccgc aaccaacacc aaatgcgaca
     2761 acaccg
//
LOCUS       DALMNS010000159         2757 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.159, whole genome shotgun sequence.
ACCESSION   DALMNS010000159 DALMNS010000000
VERSION     DALMNS010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.159"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..2013)
                     /gene="fnbB"
                     /locus_tag="O6Y56_002523"
     CDS             complement(<1..2013)
                     /gene="fnbB"
                     /locus_tag="O6Y56_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin-binding protein FnbB"
                     /protein_id="HDB5575757.1"
                     /translation="MKSNLRYGIRKHKLGASSVFLGTMIVVGMGQENEAAASEQNNTT
                     VEESGSSATERKASETQTTTNNVNTIDETQSYSATSTEQPSQSTQVTTEEAPTTVQAP
                     KVETSRVDLPSEKVADKETTGTQVDTAQPSNASEIKPRMKRSTDVAAVAEKEVVGEAK
                     TTGSDVTSKVTVENGSEIVGHNNKETNVVNPHNAERVTLKYKWKFGEDIKPGDYFDFT
                     LSNNVETHGISTLRKVPEIKSTDGQVMAVGEVNEERKIRYTFKEYVQGKKDLKAELDL
                     NLFIDPTTVTKRGNQNIEVTLGEKKISKQFDIKYLDGVKDNWGVTVNGRIHTLNKQEG
                     RFSHFAYVKPNNQSLSSVTVSGQVTKGNKSGASNPTVKVYKHIGSDELAESVYGDILD
                     ETKFEDVTDKLSLTLTGNGGYTLDFSELDKTKNYVIKYEGDYDSSASDLNFQTKLSGY
                     HNYYYSYYPVQLTWNNGVAFYSNKAQGDGKDKPNDPIIDKSEPIELDIKSEPPVEKHE
                     LTGTIEESNDSKPIDFEYHTAVEGAEGHAEGIVETEEDSIHVDFEESTHENSKHHADV
                     VEYEEDTNPGGGQVTTESNLVEFDEDSTKGIVTGAVSDHTTVEDTKEYTTESNLIELV
                     DELPEEHGQAQGPIEEITENNHHISHSGLGTENGHGNYGVIEEIEEN"
BASE COUNT          760 a          528 c          373 g         1096 t
ORIGIN      
        1 attttcttcg atttcttcaa tcacaccata attaccgtga ccattttcag ttcctaaacc
       61 agaatgagaa atatgatgat tgttttcagt gatttcctcg attggtcctt gtgcttgacc
      121 atgttcttca ggtagttcat ctactagttc aatcagatta ctttcagttg tatattcttt
      181 cgtatcttca actgttgtat ggtcgctcac tgcgccagtt acaatacctt ttgtagaatc
      241 ttcgtcaaat tcaactaagt tagactcagt agtaacctga ccaccacctg ggtttgtatc
      301 ctcttcatat tcaacaacat cagcgtgatg ttttgaattt tcatgagtag attcttcaaa
      361 atccacatga atagaatctt cttcagtttc tacaatacct tcagcatgac cttctgcacc
      421 ttcaacagct gtatgatatt caaaatcaat tggcttagaa tcgttacttt cttcgattgt
      481 accagtcaat tcatgcttct ccactggcgg ctctgattta atgtctaatt caattggttc
      541 actcttatca atgataggat cattgggctt atctttgccg tcgccctgag ctttattaga
      601 gtagaatgca acgccgttgt tccaagttaa ttgaactggg taatacgaat aataataatt
      661 atgataaccg gataacttcg tttggaagtt taaatcacta gcagacgagt catagtcacc
      721 ttcatactta attacataat ttttagtttt atccaattca ctaaaatcta aagtatatcc
      781 accatttcca gtaagtgtta aacttagttt atcagttaca tcttcaaact ttgtttcatc
      841 cagaatatct ccataaacac tttcagctaa ttcatccgaa ccaatgtgtt tatatacttt
      901 gactgttgga ttgctagccc ctgatttatt tcctttagta acttgaccac ttacggttac
      961 agaacttaac gattggttgt taggtttcac gtatgcaaaa tggctaaatc taccttcttg
     1021 cttattcaaa gtatgaattc gaccattaac tgttactccc cagttatctt ttacaccgtc
     1081 taagtatttt atgtcgaatt gtttagatat cttcttctct cctaaggtca cttcaatatt
     1141 ttggttacct ctttttgtca ctgttgttgg gtcgataaat aggtttaaat ctaactcagc
     1201 ttttaaatct tttttacctt gtacatattc tttaaatgta tacctaattt tcctttcttc
     1261 attcacttca cctactgcca taacttgacc atctgtactt tttatttctg gaactttacg
     1321 cagtgttgaa ataccatgcg tttctacatt attacttaat gtgaaatcaa aatagtcccc
     1381 cggttttata tcttcaccga atttccattt atatttcaag gttactcttt ctgcattatg
     1441 aggattaaca acatttgtct ctttattgtt atgtcctaca atttcactac cattttctac
     1501 tgtaacttta cttgttacat ctgagcctgt cgtcttagct tctcctacta cttctttctc
     1561 tgcaactgct gcaacgtcag ttgatctttt cattcttggt ttaatttctg aagcgttact
     1621 tggttgagct gtgtcaactt gagttcctgt agtttcctta tcagcaactt tttccgatgg
     1681 caaatcaact cgcgaagttt ctacttttgg tgcttgcaca gttgttggtg cttcttctgt
     1741 tgttacttgt gttgattgtg atggttgctc agttgatgtc gcgctgtatg attgtgtttc
     1801 atctattgta ttaacgttat ttgtagttgt ttgtgtttcg cttgcttttc tttcagtagc
     1861 tgaactccca ctttcctcta ctgtagtatt gttttgttcc gatgctgcag cttcattttc
     1921 ttgtcccatt ccaacaacga tcattgttcc taagaatact gaggacgctc ccaatttgtg
     1981 ttttcttatg ccgtatctaa gattgctttt cactataata ttctccctta aatgtaaaat
     2041 tcatttattt tttaaactca ataaatgcaa ttctatattg ttcggttttt aaaagcaatg
     2101 aaaaaaagcg agttaataaa aagttaagat tgttgttaac tttatgtata atgagttttt
     2161 tattatttgg aactcacata tatattgcat acaaaactct tgaacacctt gatataacgg
     2221 gcttgtattt tttatactta ctttttaaat taaattcaaa ttcatctaat ttaaaacaat
     2281 atactaaagc atacataata atcgcctgta caatgcatca ttaacaagtc actgaaacac
     2341 ctttcattgt attaataacg tcactataat ttttatatcg ttcggttttt atttgatttt
     2401 aatgattatt tatacagaaa cagccgtatt tcaagacgac attttaaatt taactaaatt
     2461 tgcatctagt taataattgc atttatcaaa tttgtcttat tgatccaatc taatttgtac
     2521 ttacaaacta gttttaaatt ctaactttat ctctcatttt gtaatcaatc atcagacata
     2581 aaccaatgaa gcgatcagaa aacactctaa ttttctatta gaaatttgat ttaatctaaa
     2641 aaaacaggct tacttcatat aatttatgaa ataaacccgt caatttttgt ttaattatgc
     2701 tttgttattc tttttatttc tacgtaataa tgctaaacct agaatgctga ataatcc
//
LOCUS       DALMNS010000160         2610 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.160, whole genome shotgun sequence.
ACCESSION   DALMNS010000160 DALMNS010000000
VERSION     DALMNS010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2610)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2610)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2610
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.160"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            449..1696
                     /locus_tag="O6Y56_002524"
                     /pseudo
     CDS             449..1696
                     /locus_tag="O6Y56_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500931.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hyaluronate lyase"
     gene            complement(1756..2610)
                     /locus_tag="O6Y56_002525"
     CDS             complement(1756..2610)
                     /locus_tag="O6Y56_002525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDB5575758.1"
                     /translation="MNKTNFGDYLNKSKSRKIYKIFDQNLKQEFSYWQFRKLFKSYTR
                     QSDVHELKVCTQNDGTIEQIWIDKANQFGVSVTWKDNSIIGFVMRPLINYDAIKNETT
                     LKYAVPTTDCYEVFWGGDNELYNYHYLYPHQRYAIDLVIKENHKTYKNLGKVNTDYFC
                     FGKDIIAPANGTVEKVVSGVQDNSIGSTNESQFLGNYIVIKHAENEYSLIAHLQQYSI
                     IVDEGQNVKYGDIIGKVGNSGNSTEPHIHFQVMNDKNIEACTSLKIRFINNRELIKGD
                     VVCGLQGE"
BASE COUNT          933 a          445 c          351 g          881 t
ORIGIN      
        1 ataattatcc tttcaaaact cttcctcttt cttgtttaaa tacattaatt gatttaaatt
       61 ttcttagtct ggttaagtat ttcaaatagc tcataaccgt atttagaata gtattttcat
      121 ttgtttcttt tctcacggct tctgatagct acatatccat tacctttagt tcattttggt
      181 aacaatctca taaagttcga taattcctca aatcctacat catctattat tgtatctgtc
      241 tgctccataa acttataaaa gagatttaat ttgaatcttc acattctccc ctctttttaa
      301 ttactacaac tactataaat tatagctctt gttagtttct atttaaagaa atataatggc
      361 acatatcacc tttccttaaa tactttaatt aacacaattt attgtaatat gaatagtgcg
      421 tgatgacatg gacactatta cttcaaaaaa atataagcaa atcgttaaaa tttctgttaa
      481 ttctgattcg agttatgact caaatgacac attaatttct tattcagaca ttagcaaatt
      541 gaaatcttta atataagaca gcactatttc tactaacggt ttaacacaac aacttaaaat
      601 atataatgac atggaccgtg tcacctatca caataaagac ctggactttg catttggttt
      661 aagtatgacg tcgaaaaacg tcgcacgtta cgaaagtatc aataatgaaa acttaaaagg
      721 ttggcatact ggtgctggaa tgtcttattt atacaatagc aatgtgaaac actaccgtga
      781 taacttctgg gcaacagctg atatgaaaag attagcaggt actacaactt tagaaaatga
      841 agaacctaaa ggtacggatg ttaaaatgtc tagtaaaact tttgtaggcg gaacaaaatt
      901 tgatgaccaa catgctagca tcggaatgga ttttgaaaat caggacaaaa ctctaactgc
      961 caaaaaatca tatttcatat taaacgataa aattatcttc ttaggaactg gcattaaaag
     1021 tactgattca tcaaagattc cagtgacaac gattgaaaat cgcaaagcga atgggtatac
     1081 gttatataca gacgataaac aaataaccgc ttccgataat caggaaacca attcagtctt
     1141 tttagaatca acgaatagca ctcaaaacaa tataggcttt caatttttaa acaaatcgaa
     1201 aataactgta aaaaaagaaa gtcatactgg taagtggagt gatataaata aaagtcaaaa
     1261 atcagaagac aaaaaagatg agtattatga agtaaatcaa aagcattcta atacagatga
     1321 taaatatgga tatgtgttgt atccaggctt atctaaagat gactttaaga caaaaaaaga
     1381 tgaagtaact gtcgttaagc aaggagatga cttccacgtt gtgaaagata atgaatcggt
     1441 ttgggctggt gttaattaca gcgatagcac taaaactttt gaaattaatg gtactaaagt
     1501 tgaagttaaa gccaaaggta tgtttatact taaaaagaaa gatgataaaa cttatgaatg
     1561 tagcttcttt aatcccgaat ctacaaattc cgtttcagat atagaatcaa aaatttttat
     1621 taaaggttac accataacta ataaaagtgt cacaaactct aatgatgcag gtttaaactt
     1681 tgaattaact aaataattaa gaaaaactcg gcactatact atttttatag tgtcgagttt
     1741 ttataagcat aactatcatt caccttgtaa tccgcagacc acatcaccct tgataagttc
     1801 tcgattattt ataaatcgaa ttttcaaaga tgtacatgct tcaatattct tatcattcat
     1861 tacttgaaaa tgtatatgag gttcagtaga gttgccagaa ttcccaacct tcccaatgat
     1921 gtcaccatat ttaacatttt gcccctcgtc cacaatgatt gaatattgtt gtaaatgagc
     1981 gattaagcta tactcatttt ctgcgtgctt gattacaata taatttccta aaaactgtga
     2041 ttcattcgtg cttccaatac tattgtcttg aactccactc acaacttttt caactgtacc
     2101 atttgctggc gcaatgatat cttttccaaa acaaaaataa tcagtattta cttttcctag
     2161 gttcttatat gttttatgat tttctttaat aactaaatca atagcatacc tttgatgtgg
     2221 gtataaatag tgataattat ataattcatt atctccaccc caaaaaacct catagcaatc
     2281 agttgtcggc actgcatatt ttaaagtcgt ttcattctta atcgcatcat aattgattaa
     2341 cggacgcata acaaatccga taatactatt atctttccaa gtcactgaca ctccaaattg
     2401 atttgcttta tctatccata tttgctcaat agtaccatca ttttgagtac acacttttaa
     2461 ttcatgtaca tcagactgcc ttgtataaga tttgaaaagt ttcctaaact gccaataact
     2521 aaactcttgc ttcaaatttt gatcaaaaat cttatatatt ttcctgctct tacttttatt
     2581 taaataatcc ccaaagtttg ttttattcat
//
LOCUS       DALMNS010000161         2599 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.161, whole genome shotgun sequence.
ACCESSION   DALMNS010000161 DALMNS010000000
VERSION     DALMNS010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2599
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.161"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            93..560
                     /locus_tag="O6Y56_002526"
     CDS             93..560
                     /locus_tag="O6Y56_002526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcdC family protein"
                     /protein_id="HDB5575759.1"
                     /translation="MLYLLFSIIVALFMGTIVIVIRMKAQNYPVNEKKIVLPPFFMAT
                     GALMYVVPYFRLTGSEMLEAFIIGLLFSTVLIWTSRFEVKGTEIYMKRSKAFPVILIS
                     LLIIRTVMKIFISNEIDPGELGGMFFLLAFCMIVPWRAAMLYKYKKLKKTLIN"
     gene            685..1806
                     /locus_tag="O6Y56_002527"
     CDS             685..1806
                     /locus_tag="O6Y56_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="HDB5575760.1"
                     /translation="MKIIHTADWHLGKILNGKQLLEDQAYILDMFVEKMKEEEPDIIV
                     IAGDLYDTTYPSKDAIMLLEQAIGKLNLELRIPIIMISGNHDGKERLNYGASWFEHNQ
                     LFIRTDFTSINSPIEINGVNFYTLPYATVSEMKHYFEDDTIETHQQGITRCIETIAPA
                     IDEDAVNILISHLTVQGGKTSDSERPLTIGTVESVQKGVFDIFDYVMLGHLHHPFSIE
                     DDKIKYSGSLLQYSFSEAGQAKGYRRVTINDGIINDVFIPLKPLRQLEIISGEYNDVI
                     NEKVHVKNKDNYLHFKLKNMSHITDPMMSLKQIYPNTLALTNETFNYNEENNAIEIRE
                     KDDMSIIEMFYKHITDKELSDIQSKKIKNILENGLRKED"
     gene            1810..>2599
                     /locus_tag="O6Y56_002528"
     CDS             1810..>2599
                     /locus_tag="O6Y56_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000803170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDB5575761.1"
                     /translation="MKPLHLKLNNFGPFLKEEIDFSKIDNNELFLISGKTGSGKTMIF
                     DAMTYALFGKASTEQREENDLRSHFADGKQPMSVTFEFQLNHRIYKVHRQGPYIKEGN
                     TTKTNAKFDVFEMVDGKYEIRESKVISGTQFIIELLGVNADQFRQLFILPQGEFKRFL
                     ISNSREKQGILRTLFDSEKFEAIREILKEEVKKEKAQIENRYQQIDLLWQEIESFDDD
                     KIKGLLEVATQQIDKVIENIPLLQARSKEILAFVNESKETAIKEY"
BASE COUNT          985 a          329 c          474 g          811 t
ORIGIN      
        1 attaaagtta acaaaatgac gaatagactg agaaatgcta taattcattt tgtatgattt
       61 acagagagtt tatttaacga gaaggtgtct gcgtgctcta tttattattt tcaatcattg
      121 tagctttatt tatgggaact atagttatag ttattcgtat gaaagctcaa aattatccgg
      181 taaatgagaa aaaaatagtt ttgccaccgt tttttatggc gactggtgca ttgatgtacg
      241 tcgttccata ttttaggcta actggatcgg aaatgctaga agcctttata attggtttgc
      301 ttttttctac agttctaatt tggacttctc gatttgaagt caaaggtaca gaaatttata
      361 tgaaacgatc taaagcattt ccagttattt tgatttcatt acttatcatt cgtactgtga
      421 tgaaaatatt cattagtaat gaaatagatc ctggagaatt aggcggcatg ttctttttat
      481 tagcattctg tatgattgtt ccttggagag cagcaatgct atataaatac aaaaaactaa
      541 agaaaacatt aatcaattaa ttacttttaa aaccacttgt gatcgacttt taaatcagtc
      601 aatgagtggt tttaatttta cttgaaaagg tgaaatgttt atattaaaat aaaaagcgaa
      661 caaatgttct atatggaggc agtaatgaaa attatacata cagcagactg gcacttaggg
      721 aaaatattaa atggcaaaca gcttttagaa gatcaagcgt atattttaga tatgttcgta
      781 gaaaaaatga aagaagaaga acctgatatc attgtgatag ctggagattt atatgacaca
      841 acatatccaa gtaaagatgc aatcatgtta ttagaacaag cgattggaaa gctaaattta
      901 gaactgcgta taccaataat tatgattagc ggaaatcacg atggtaaaga gagattaaac
      961 tatggggcga gttggtttga acataatcag ttatttataa gaacagattt tacatcgatt
     1021 aattcgccaa tagagataaa tggggttaat ttttatacac tcccttatgc tactgtgagc
     1081 gaaatgaaac actattttga agatgacacc attgaaacgc atcaacaggg aattacgcgc
     1141 tgtattgaaa caatagcacc ggcaattgat gaagatgccg tcaatatttt aattagtcat
     1201 ctgactgttc aaggtggaaa gacatctgat tctgaaagac cattaactat tggaacggtt
     1261 gagtcagttc agaaaggtgt ttttgatata tttgattatg tcatgctagg tcacttgcat
     1321 catccattta gtatagaaga cgacaaaatt aaatatagtg gctccttatt gcagtattca
     1381 ttttcggaag cgggtcaagc taaagggtat agacgtgtaa caattaacga tggcattatt
     1441 aacgatgtat ttattcctct taagccgctt agacaattgg aaattatctc gggcgaatat
     1501 aatgatgtta ttaatgaaaa agttcatgtg aaaaataaag ataattattt acattttaaa
     1561 cttaaaaata tgtcccatat tactgatcca atgatgagtt taaaacaaat ttatcctaat
     1621 actttagcgc tgacgaatga aacttttaat tacaatgaag aaaataacgc tatagaaata
     1681 agagaaaaag atgacatgtc aatcatcgaa atgttttata aacatataac tgataaagaa
     1741 ttatcggata tccaatctaa aaagataaaa aatattttag aaaacggatt gagaaaggag
     1801 gattaatgaa tgaaaccatt acatttaaag ttgaataatt tcggaccctt tttaaaagaa
     1861 gaaattgatt tttctaaaat tgataataat gaattgtttt taataagtgg taagactgga
     1921 tcgggtaaaa caatgatttt tgatgcaatg acttatgcct tgtttggtaa agcatcaact
     1981 gaacaaagag aagaaaatga tttgagaagt catttcgctg atggtaaaca gccgatgtca
     2041 gtaacgtttg aatttcaatt aaatcatcga atttataaag tgcatagaca aggcccttat
     2101 atcaaagaag gtaatacaac aaaaacgaac gctaaatttg atgtatttga gatggtggat
     2161 ggcaagtatg aaattagaga aagtaaagta atttcaggta cccaattcat tattgaatta
     2221 ttaggagtaa atgcagatca attccgacaa ttgtttattt tgcctcaagg tgaattcaaa
     2281 cgctttttaa tatcaaacag tcgtgaaaag caagggatat taagaacact gtttgacagt
     2341 gaaaaatttg aagctatacg agaaatatta aaagaagaag taaaaaaaga aaaagctcaa
     2401 atcgagaata gatatcaaca aattgacctt ttatggcaag aaattgaatc atttgatgat
     2461 gacaaaataa aaggcttatt agaggttgcc actcaacaga tagacaaagt gattgaaaat
     2521 ataccacttt tacaagctag gtcgaaagaa atactagcat ttgtgaatga aagtaaagaa
     2581 actgctatta aagaatatg
//
LOCUS       DALMNS010000162         2575 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.162, whole genome shotgun sequence.
ACCESSION   DALMNS010000162 DALMNS010000000
VERSION     DALMNS010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2575
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.162"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..99)
                     /locus_tag="O6Y56_002529"
     CDS             complement(<1..99)
                     /locus_tag="O6Y56_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF600 family protein"
                     /protein_id="HDB5575762.1"
                     /translation="MTFEEKLSEIYNKIANEISGMIPVEWEKVYTIA"
     gene            complement(615..1007)
                     /locus_tag="O6Y56_002530"
     CDS             complement(615..1007)
                     /locus_tag="O6Y56_002530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000878106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5084 family protein"
                     /protein_id="HDB5575763.1"
                     /translation="MKYTWWILLTIAGILSLTSVYGFILCLGSFGMLAMNVMWLFVYT
                     PHKNSKALESISKPTIILSIIGTYAVFIFMSSLFYFVMKARFMEIGIKLYGESFNMFG
                     IPLFIIATILFTIGTVFVYKIQQSRLKQ"
     gene            complement(1009..1398)
                     /locus_tag="O6Y56_002531"
     CDS             complement(1009..1398)
                     /locus_tag="O6Y56_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020361182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HDB5575764.1"
                     /translation="MEKLIKVTSLIGIIIQSFLTLLFLLFLILSATGIIQPELTTTVN
                     GEQTIQSPETAQATFVTIFAILFVVSLASDLLGIIAMKKLFVNNRASGILYIIGAVIS
                     ANLLTFIAWLISGISVLRYNKIGKEVS"
     gene            complement(1416..1790)
                     /locus_tag="O6Y56_002532"
     CDS             complement(1416..1790)
                     /locus_tag="O6Y56_002532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000825543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4467 domain-containing protein"
                     /protein_id="HDB5575765.1"
                     /translation="MKRLCIGLLIIMMSIINYGCGNEQNENKYQSQINKVMKIQQETH
                     KEMVKKSNEVNPEFNKDKVNTYVFNDGKLIIISYKLFKDKDQMFYATYEFKNDKIYYK
                     RDINPKTYVKEHQSDYKDIKVK"
     gene            complement(1805..2278)
                     /locus_tag="O6Y56_002533"
     CDS             complement(1805..2278)
                     /locus_tag="O6Y56_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000411307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5083 family protein"
                     /protein_id="HDB5575766.1"
                     /translation="MEKIKKINKIFLSFEVVPFAMMILLAFPPIIASLINNRLQYGRD
                     LYDRVSFYCYISIMVAYAITILLEIIFYFILLKNYQYDRSNIELANRVKVTKVLSILY
                     IIPGLYAIPFYFRFLHIRSFRENKKSGQPAYHFWEFFIKPNRKPIELKDFFIKNR"
     gene            complement(2315..>2575)
                     /locus_tag="O6Y56_002534"
     CDS             complement(2315..>2575)
                     /locus_tag="O6Y56_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01741 family protein"
                     /protein_id="HDB5575767.1"
                     /translation="LYYLFKNLRNLFKTEEHEPWTSCEFDFTRDGKLNVSFDYVDWIK
                     LSLGPLARENYYMYKKFGVIPEMEYEMEEIKEIEQYIKRQES"
BASE COUNT          874 a          425 c          266 g         1010 t
ORIGIN      
        1 ggctatcgta tatacttttt cccactctac tggtatcatc ccactaatct cattcgcaat
       61 cttgttgtat atttcactta gtttttcttc gaaagtcatg ttatctcccc taatctctac
      121 tttaataata acgatatatt tataaataca ttcaaataac ttattattct atttttacaa
      181 ttcagtaaaa tctaaatata tccatccatt taaattttca tcctaaattg gttcatcatc
      241 ttgaaactat ataatcgcct tgtatccatg agagttttta tttacgatac tcgtttctat
      301 ttttcgaaaa tggaaacaga atcgtgattt tcaacgcaaa taaatgaagg tacaaattta
      361 tcaaactggt ttaagttact catgtttatc tatccttcat ttaccgttat taaaatttag
      421 atttcctttc taaatcatta cattttcagt tggatttttt atattttaat attataaaaa
      481 tcacatttta cattcattgt cattatcttt ttatcttcaa agtatttgag tcatatagat
      541 tcaactacat ctattatgta taaatcatta ggacggattt cttttaaacc cgtcccattt
      601 taaattaata tattctactg ctttaatctt gattgctgta ttttataaac gaatactgtg
      661 ccgattgtaa ataaaatggt agcaataatg aataatggta ttccaaacat attaaaagat
      721 tcaccgtaaa gttttattcc aatttccata aacctagctt tcattacgaa gtaaaataag
      781 ctagacataa atataaatac tgcatatgtc ccaatgatcg ataaaattat cgttggtttt
      841 gatatagatt caagtgcttt agaattttta tgcggtgtat aaacaaatag ccacatgaca
      901 ttcattgcca acattccaaa gctacctaaa cataaaataa atccataaac acttgttaaa
      961 cttaaaatcc ctgcaattgt taaaagtatc caccaagtat atttcatgct atgacacttc
     1021 ttttcctatt ttgttatatc ttaaaacaga aatcccactt attaaccaag caataaatgt
     1081 taataaattg gcactgatca ctgcaccaat aatatacaaa atgccactcg ctctattatt
     1141 cacaaacaac tttttcatag ctataatgcc taataaatct gaagctaaag aaacaacaaa
     1201 taatattgca aatattgtca cgaatgttgc ttgagcagtt tctgggcttt gtatagtttg
     1261 ttcaccatta acagttgtgg tcaattctgg ctgtataatg cctgttgctg ataaaattaa
     1321 aaataataaa aataacaatg ttaaaaaact ttgaataata attccaatta aagacgtcac
     1381 tttgattaat ttttccattt tcctactcct ttaaattatt ttactttaat atctttataa
     1441 tctgattggt gttctttcac gtatgtttta ggattaatat ctctcttata ataaattttg
     1501 tcgtttttaa actcgtaagt cgcgtaaaac atttgatctt tatctttaaa taacttatag
     1561 ctgatgataa ttaatttgcc atcattaaac acataagtat ttactttatc cttattaaat
     1621 tcaggattaa cttcattact ctttttaacc atctctttat gagtttcttg ttgaattttc
     1681 attactttat taatttgact ttgatattta ttttcatttt gctcattacc acaaccataa
     1741 tttattatac tcatcattat aattaacaat cctatgcata atcttttcat tggttactcc
     1801 ttaattatct atttttaata aaaaagtctt tcaactctat gggtttgcga ttaggtttta
     1861 taaaaaattc ccaaaagtga taggccggct gtccagattt tttattttct ctaaatgagc
     1921 gaatatgtaa aaatctaaaa tagaatggaa tcgcatataa tcctggaatg atatacaaaa
     1981 tcgacagtac ttttgtaact ttcactctat tagctaattc aatattactt cgatcatatt
     2041 gatagttttt caataaaata aagtaaaaaa taatttctaa caatatggta attgcatatg
     2101 caaccataat tgaaatataa caataaaagc ttactctatc gtagagatct ctaccatact
     2161 gcaaacgatt attaattaga cttgcaataa ttggtggaaa tgctagcaaa atcatcattg
     2221 caaatggaac aacttcaaat gataaaaata ttttgtttat tttctttatt ttttccatta
     2281 ttgctccttt aattagttaa cctctttcct ataattaact ttcttgtctt ttaatatatt
     2341 gctcgatttc tttaatttct tccatttcat attccatttc tggtataacc ccaaattttt
     2401 tatacatata gtagttttct ctagctaacg gacctaaact taatttaatc caatcgacat
     2461 aatcaaaaga tacgtttaat ttaccatctc ttgtaaagtc aaattcgcat gatgtccatg
     2521 gttcatgttc ttctgtttta aataaattcc ttaaattctt aaacaagtaa taaag
//
LOCUS       DALMNS010000163         2545 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.163, whole genome shotgun sequence.
ACCESSION   DALMNS010000163 DALMNS010000000
VERSION     DALMNS010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2545)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2545)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.163"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(266..895)
                     /locus_tag="O6Y56_002535"
     CDS             complement(266..895)
                     /locus_tag="O6Y56_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4887 domain-containing protein"
                     /protein_id="HDB5575768.1"
                     /translation="MSNQNYDYNKNEDGSKKKMSTTAKVVSIATVLLLLGGLVFAIFA
                     YVDHSNKAKERMLNEQKQEQKEKRQKENAEKERKKKQQEEKEQNELDSQANQYQQLPQ
                     QNQYQYVPPQQQAPTKQRPAKEENDDKASKDETKDKDDKASQDKSDDNQKKTDDNKQP
                     AQPKPQPQQPTPKPNNNQQSNQSNQQAKPQAPQQNSQSTTNKQNNANDK"
     gene            1598..2500
                     /locus_tag="O6Y56_002536"
     CDS             1598..2500
                     /locus_tag="O6Y56_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HDB5575769.1"
                     /translation="MKQYLITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNDKKIS
                     YVNWAKSGWEHKVPQNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSR
                     NKAPKVLFNASATGYYPPDLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVV
                     IGRFGMILSNEGGALQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESA
                     SGPFNLTAPIPERQNLFGYTLARAMHKPHETWAPNLAMRLILGQMSTVVLDTQKVLPN
                     KIQALGFQFKYSNLKMALEDLISK"
BASE COUNT          780 a          427 c          397 g          941 t
ORIGIN      
        1 tggcggggcc ccaacacaga agctggcgga aagtcagctt acaataatgt gcaagttggg
       61 gttggacgac gaaataaatt ttgcgaaaat atcatttctg tcccacctca ctcaaaataa
      121 atttcactat ccgcaaaaca aacaactaac tatttaagta tcatctctcc cctaattaac
      181 aattataaaa ataagaacca atattcgaga caacctgatt aattgtgttg tctgtcatac
      241 tggttcattt ttgtttgact aaatactact tatcattagc attattttgt ttatttgttg
      301 ttgattggct attttgttgt ggtgcttgtg gttttgcttg ttgatttgat tgattgcttt
      361 gttgattatt atttggcttt ggtgttggtt gttgcggctg tggtttaggc tgagctggtt
      421 gtttattatc atcagttttc ttctgattat catctgattt atcttgagat gctttgtcat
      481 ccttatcttt cgtctcatcc tttgatgctt tatcatcatt ctcttcttta gcaggacgtt
      541 gctttgtagg tgcttgttgc tgaggtggca catattgata ttgattctgc tgtggcaatt
      601 gctgatattg gttcgcttgt gaatctaact cattctgctc tttttcctct tgttgctttt
      661 tctttctctc tttttctgca ttttcttttt gacgcttttc tttttgttcc tgcttttgtt
      721 cgtttaacat acgttcttta gctttattcg aatgatctac atatgcaaaa attgcaaata
      781 ctaatcctcc gagtaatagc aataccgtcg caatgctaac tactttcgct gttgtactca
      841 ttttcttctt acttccatct tcatttttat tgtagtcgta attttgattc gacatactct
      901 ccctcacttc aaactaattt aaatatagaa attatcacgc aaccattaac attttcacaa
      961 ctaatttgct tacctagttt ctacaaatat taataaacat gtactctttt tgccttcttc
     1021 aacttaaaac tgccttcact attactcact cgtaaatcgg gttcattttt acaaagaaat
     1081 agtagtctta tatatcttaa catttaataa ctaaatcaaa catattttga gccttttttt
     1141 gaaaattaac attttaacct ttttgatttt acaacaaatt atagctacgt attgaaaatt
     1201 aaagcattgc tttaagtgtt gtgttaaaag tttttatgtt tagattgtta tattactatg
     1261 tattcttaaa tttgtttaaa aaattaatgc tttgaattga tgtataatgg gaataagaaa
     1321 taaataaaaa cgacccgcac gataaacgta cgggtccact actaaaggga gtcaaatttt
     1381 taccttcgtt tgtatcatgc agcgttttac acatactttt aagagatgtt tattcgttat
     1441 cgaaggtaca cctttattat aacttatatc atttttatta aaatacaatt caaaaaaaat
     1501 tattgacata ttattgtcta aataatgtat aacctttgaa caacaataat gattattaaa
     1561 tagtaactaa atacaaaatt acatggggtg aatgataatg aaacaatact taattactgg
     1621 cgggactggt atggttggat ctcaattagt taatgaaatc aaaaaatcag attcacatat
     1681 cacgatatta acgcgacacg accaaatttc aaatgataag aaaatttcat atgtcaactg
     1741 ggctaaatct gggtgggaac acaaagttcc tcaaaatatc gatgtggtca tcaacttagc
     1801 aggtgctaca ttgaataaac gatggacacc ggaatataaa caaacgctaa tgctaagtag
     1861 aattcaatct acacaagctt tatatgaatt gtttaaatca cgtaataaag cacctaaagt
     1921 tttatttaat gctagtgcca ctggttacta tccccctgat ttatttatga gttacacaga
     1981 agtttataaa actttaccat ttgatttctt atcagatatt gtgtatcaat gggaacgttt
     2041 cgcacaacaa tttgaacaat taggtacgcg agttgtcatc ggtcgtttcg gtatgatttt
     2101 atcgaatgaa ggcggtgcgt tacaaacaat gaaactacca tacgaatatt acattggtgg
     2161 taaattaggt tctggtcaac aatggtattc atggattcat atcaatgatt taattcaagc
     2221 tattttattt ttaataaata acgagtcagc tagtggtccg tttaatttaa ctgcacctat
     2281 acctgagcgt caaaatttat ttggctacac tttagcaaga gctatgcata agcctcatga
     2341 aacttgggca ccaaatcttg caatgcgtct catactcggt caaatgtcaa cagtagtatt
     2401 ggatactcaa aaagtattac ctaataaaat tcaagcattg ggattccaat ttaaatatag
     2461 taatttaaaa atggcacttg aagatttaat tagtaagtga gtgggacatt gatctctcct
     2521 actccacttc aagcaaaaag cttgg
//
LOCUS       DALMNS010000164         2443 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.164, whole genome shotgun sequence.
ACCESSION   DALMNS010000164 DALMNS010000000
VERSION     DALMNS010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2443)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2443)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2443
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.164"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(2..604)
                     /locus_tag="O6Y56_002537"
     CDS             complement(2..604)
                     /locus_tag="O6Y56_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDB5575770.1"
                     /translation="MNKISKALTWFIISFIIFHLILFIMWGEHQEYWYLYTGIMLIAG
                     ISYVFYQRDIESKRLLTSIGVGIITAIILIMLQLLFSLITSNLSYSSLIKELARTGVN
                     WKWQMLVTLLFVIPCHELYMRTVLQKELTHFSIPKWVAILITAICSSSLFIYLDNWWI
                     VTFIFVAQVILSLSYEYTRRIATTSVAQIVAIILLLIFNA"
     gene            complement(619..795)
                     /locus_tag="O6Y56_002538"
     CDS             complement(619..795)
                     /locus_tag="O6Y56_002538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkvS family protein"
                     /protein_id="HDB5575771.1"
                     /translation="MTVAEVGNIVEFMDGLRGRVEKINDNSVIVDLTIMENFNDLDLP
                     EKTVINHKRYKIVE"
     gene            994..1980
                     /locus_tag="O6Y56_002539"
     CDS             994..1980
                     /locus_tag="O6Y56_002539"
                     /EC_number="6.3.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase"
                     /protein_id="HDB5575772.1"
                     /translation="MKFISNNNITDPTLNLAMEEYVLKNLPAEESYFLFYINRPSIIV
                     GKNQNTIEEVNQTYIDAHNIDVVRRISGGGAVYHDTGNLNFSFITDDDGNSFHNFQKF
                     TEPIVQALQSLGVNAELTGRNDIQVGQAKISGNAMVKVKNRMFSHGTLMLNSDLDEVQ
                     NALKVNPAKIKSKGIKSVRKRVANIQEFLNDPLEIEEFKKIILKTIFGETEVEEYKLT
                     DEDWENIEKLSNDKYRTWEWNYGRNPKYNFEREEKFEKGFVQIKFDVKRGKIEHAKIF
                     GDFFGVGDVTDLENALVGCLHDFEHIEEALSEYDLYHYFGDIDRHELIRLMS"
     gene            complement(2061..2279)
                     /locus_tag="O6Y56_002540"
     CDS             complement(2061..2279)
                     /locus_tag="O6Y56_002540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IDEAL domain-containing protein"
                     /protein_id="HDB5575773.1"
                     /translation="MKYNTNVKHTTLEAFVTTVNDLGIELIINEALREVRKRQLIELI
                     DDALVNKDEAAFNQYTAEYKNLEAFLGE"
BASE COUNT          928 a          344 c          358 g          813 t
ORIGIN      
        1 tttaagcatt aaaaattaat aacaatataa tagctacaat ttgcgcaacg gatgttgttg
       61 ctatgcgtcg agtatactca tagcttaatg ataatatcac ttgtgcaaca aatataaatg
      121 ttactatcca ccaattatct aaataaataa ataatgaact tgaacaaatt gcagttatta
      181 atatagctac ccatttcggt attgaaaaat gtgttaattc tttttgtaaa acagttctca
      241 tatataactc gtgacatgga atgacaaaaa gtaaagttac taacatttgc cacttccaat
      301 tgacacctgt tcttgctaat tctttaatta atgaactata acttaaatta gaagttataa
      361 gtgagaataa aagttgaagc ataattaaaa taattgccgt aataatacca acaccaattg
      421 atgtaagcaa ccgcttagat tcaatatctc tttgataaaa cacataactg ataccagcaa
      481 ttagcattat acctgtatat aaataccagt attcttggtg ttcgccccac ataataaata
      541 atatgagatg aaatataatg aaacttataa taaaccaagt taaagccttc gagattttat
      601 tcattataac ttaccttctt attcaacaat cttatatcgt ttatgattga taacagtttt
      661 ttccggtaaa tcaaggtcat taaaattttc cataattgtt aagtcaacaa taacagagtt
      721 atcgttgatt ttttcaacac gacctcttaa tccatccata aactcaacaa tgttacccac
      781 ttctgcaaca gtcattttaa gtcctcctta aatcataact aaattatatt gtactaaaat
      841 tcacttaaca aataaactat taacaatcaa aaataataaa atgtaacttt aagccgatat
      901 ttagaatgat ttgtgagtat ataattggca ttttgagcaa agttaaggca taaataaata
      961 gagaatatat atagatataa gggagagatt gtaatgaaat tcattagtaa taataatatt
     1021 acagatccaa ctttaaactt agcaatggaa gaatatgttt taaaaaattt accagcagaa
     1081 gaaagttact ttttatttta cataaataga ccatctatca ttgttggaaa gaatcaaaat
     1141 acgatagagg aagtaaatca gacatatata gatgctcata acatcgatgt agttagaaga
     1201 atttctggtg gtggcgctgt ttatcatgat actggcaatt taaactttag ttttataaca
     1261 gatgatgatg gcaacagttt ccataatttc caaaaattca ctgaaccaat tgttcaagca
     1321 ttacaatctt taggcgtaaa tgctgaatta actggtcgta acgatattca agttggacaa
     1381 gcgaaaatct cagggaatgc tatggttaaa gttaaaaata gaatgtttag tcatggtacg
     1441 ttgatgttaa atagtgattt agacgaagtt cagaatgcac taaaagttaa tccagctaag
     1501 attaaatcaa aaggtattaa atctgttcgt aaacgagtag caaacattca agaattttta
     1561 aatgaccctt tagaaattga agaatttaaa aaaatcatct tgaaaactat ctttggagaa
     1621 actgaagtag aagaatataa attaacggat gaagattggg aaaatattga aaagttaagt
     1681 aacgacaaat atagaacttg ggaatggaat tatggaagaa accctaaata taactttgaa
     1741 cgcgaggaaa aatttgaaaa aggatttgta caaatcaagt ttgatgttaa acgaggtaaa
     1801 atcgaacatg caaaaatttt cggtgatttc tttggtgtcg gagatgtcac tgaccttgaa
     1861 aatgcattag ttggctgtct acacgacttt gagcacatag aagaagcact atcagaatat
     1921 gatttatatc actatttcgg tgacatagat agacatgaat taattagatt aatgtcataa
     1981 acgattaaag gactattctt acatgtatga gatgttaaga atagtccttt tatgattgcg
     2041 ttatagaatt cgaatcaatg ttattcaccg agaaatgcct ccaaattttt gtattctgcc
     2101 gtatattgat taaatgctgc ttcatcttta ttgacgagtg cgtcatctat aagttctatg
     2161 agctgtcgtt ttcttacctc tcgaagtgct tcattgataa ttaattcaat acccaaatca
     2221 ttgacggttg tgacaaacgc ttctaaagtt gtatgtttaa cattagtatt gtatttcata
     2281 gaaaccacta cctttcttta atttataata agtatacatt tttctaattt tgaaatcaat
     2341 gaatattctg actattagtt aaaaaatatt gtacattttc accaaaataa taacttgaca
     2401 actcagaatt ttattataaa atatctttat atcattaatt gta
//
LOCUS       DALMNS010000165         2405 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.165, whole genome shotgun sequence.
ACCESSION   DALMNS010000165 DALMNS010000000
VERSION     DALMNS010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.165"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            17..235
                     /locus_tag="O6Y56_002541"
     CDS             17..235
                     /locus_tag="O6Y56_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575774.1"
                     /translation="MENQKQGNGLKIATWVFIVLTVVTPLFGIGSIVCSINYKKYDAE
                     KGSKLLKIAIIVTIIVFVLNLLAYLGLR"
     gene            343..843
                     /locus_tag="O6Y56_002542"
     CDS             343..843
                     /locus_tag="O6Y56_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01741 family protein"
                     /protein_id="HDB5575775.1"
                     /translation="MTFEEKLSQMYNEIANEISGMIPVEWEKVYTMAYIDDGGGEVFY
                     YYTEPGRNELYYYTSVLNKYDISESEFMDSEYELYKQFQKLRNIFKEEGHEPWTSCEF
                     DFTREGKLKVSFDYIDWINSEFGQIGRQNYYKYRKFGILPETEYEINKVKEIEQYVKE
                     QEEAEI"
     gene            854..1348
                     /locus_tag="O6Y56_002543"
     CDS             854..1348
                     /locus_tag="O6Y56_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01741 family protein"
                     /protein_id="HDB5575776.1"
                     /translation="MNFEEKLSQKYNEIANKISSMIPVEWEKVYAMAYVNERSGEVFY
                     NYTEPRSDELFYYTSVLNKYNISRSEFMDSVYELYKQFDKLRELFIEEGLEPWTSCEF
                     DFTRDGKLNVSFDYIDWANSEFGQMGREHYYMYKKFGIWPEKEYAINWVKKIEDYVKE
                     QEEE"
     gene            1555..2238
                     /locus_tag="O6Y56_002544"
     CDS             1555..2238
                     /locus_tag="O6Y56_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5079 family protein"
                     /protein_id="HDB5575777.1"
                     /translation="MATKENIDILRKPGAQALSLASLFMILFSCLTFFFGLDYERFPN
                     YLKITTIIELIIIIISLLQWIRFIDFEKERAQKYKKIYARFLVVINVLTTITAVFATC
                     NLYYFVALQNHYDLFNYWLMGTISIIISYLLLVIGGMFTLLKLPKVTKRWGGKTKTHF
                     GLLLTALSAFIYIERIIEYILVPNVVESKFVIMVSIIIIVCTQFAAFQFIMQYSRFYI
                     FELNTEDDD"
BASE COUNT          940 a          237 c          429 g          799 t
ORIGIN      
        1 agtaggagtt aatgagatgg aaaaccaaaa acaaggcaat ggcttaaaaa ttgcaacatg
       61 ggtatttatt gtattaacag tagttacacc gctatttggt attggaagta ttgtttgtag
      121 tattaattac aaaaaatacg atgctgaaaa aggttcgaag ttattgaaaa ttgcaattat
      181 cgtaacaata attgtttttg ttttaaattt attagcatat ttaggtttaa gataagtaaa
      241 atgaatttga aaaagcatta agcgacattt gtttgttgtt tagtgctttt tatttaacgg
      301 aaatgaaacc aatatctatt ttgaaaatat aggggcgata acatgacttt cgaagaaaaa
      361 ttaagtcaaa tgtacaacga gattgcgaat gagatcagtg ggatgatacc agtagagtgg
      421 gaaaaagtat atacaatggc atatatagat gatggaggag gagaagtgtt ctactattac
      481 acagaacctg gaaggaatga attatactac tatactagtg tattaaataa atatgatata
      541 tcggaatcag aatttatgga ctcagagtat gagttgtata aacaatttca aaagttaaga
      601 aatatattta aagaagaagg acatgaacca tggacatcat gcgaatttga ttttacaaga
      661 gaaggcaaat taaaagtttc atttgattat atagattgga taaattcaga atttggtcaa
      721 ataggtcgac aaaattacta taagtataga aaatttggaa ttttaccaga aacggaatat
      781 gaaattaata aagttaaaga aatcgagcaa tatgttaaag aacaagaaga agctgaaata
      841 taggggagat aacatgaatt tcgaagaaaa actaagtcaa aagtacaacg agattgcgaa
      901 taaaattagt agcatgatac cagtagagtg ggaaaaggta tatgcaatgg cttatgtaaa
      961 tgaaagaagt ggagaagtgt tctacaatta tactgaacca agaagtgatg aattatttta
     1021 ctatacgagc gtgttaaata aatataatat atcaagatca gaatttatgg actcagtata
     1081 tgaattatat aagcaatttg ataaattaag agagttgttt atagaagaag gactcgaacc
     1141 atggacatca tgtgaatttg actttacaag agatggtaaa ttaaacgtat cttttgatta
     1201 tattgattgg gcgaattcag agtttggaca aatgggaaga gaacattatt atatgtataa
     1261 aaaatttgga atttggcctg aaaaagaata tgccataaat tgggttaaaa aaatagaaga
     1321 ttatgttaaa gagcaagaag aagaatagac aatcttaatg tgagactaaa caataaagct
     1381 ttgtttagtc atttttagtg gttaatgaaa aatcaatagg gaatataaag ttgatgctca
     1441 tcaaataata atataaagat aattttaggt tttttgtaga tgaaaatcta agtacttata
     1501 actttaaata cttaatatgc tattacaaaa tcaatgtata ggagataggt aaatatggct
     1561 actaaggaaa atatagacat tcttcgaaag ccaggtgcac aagccttaag tttagcatca
     1621 ttatttatga tacttttttc atgtctaact ttcttttttg gtttagatta tgaaaggttt
     1681 ccaaattatt taaagataac gacaattata gaattaataa ttatcataat tagtttactt
     1741 caatggatta gatttataga tttcgaaaag gaaagagcac agaaatataa aaaaatatat
     1801 gcccgatttt tagttgttat aaatgtgcta actactatca ctgcagtatt tgcaacatgt
     1861 aatctttact attttgttgc tttacaaaat cattatgacc tattcaatta ttggttgatg
     1921 ggcacgattt caatcataat tagctatttg ttattagtaa ttggcggaat gttcacgtta
     1981 ttaaaattac ctaaagtaac aaaacgttgg ggtggtaaaa ctaaaaccca ttttggttta
     2041 ttattaactg cgttgagcgc attcatatat attgaaagaa ttatcgaata tatattggtt
     2101 cctaatgtag tagaatccaa gtttgtcata atggtaagta tcattattat tgtttgtaca
     2161 caatttgcag cctttcaatt tattatgcaa tacagtagat tctatatttt tgaattaaac
     2221 actgaagatg atgactaaat aattttataa attactattg gagtatactt atataaaaaa
     2281 tcaacttcaa cacattattt tactcaatga tgtgaaagaa tttgagtgga ttgatattaa
     2341 tgggatttga ttattagaat tagaaaagga acgtttgctt ttgttttaat aaatctaata
     2401 ttttt
//
LOCUS       DALMNS010000166         2234 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.166, whole genome shotgun sequence.
ACCESSION   DALMNS010000166 DALMNS010000000
VERSION     DALMNS010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2234)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2234)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.166"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..156
                     /locus_tag="O6Y56_002545"
     CDS             <1..156
                     /locus_tag="O6Y56_002545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HDB5575778.1"
                     /translation="VVAPTKQKQSKKSELPETGGEESTNKGMLFGGLFSILGLALLRR
                     NKKNNKA"
     gene            343..1209
                     /gene="galU"
                     /locus_tag="O6Y56_002546"
     CDS             343..1209
                     /gene="galU"
                     /locus_tag="O6Y56_002546"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000721336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDB5575779.1"
                     /translation="MKKIKKAIIPAAGLGTRFLPATKAMPKEMLPILDKPTIQYIVEE
                     AARAGIEDIIIVTGRHKRAIEDHFDSQKELEMVLKEKGKSELLEKVQYSTELANIFYV
                     RQKEQKGLGHAISSARQFIGNEPFAVLLGDDIVESEVPAVKQLIDVYEETGHSVIGVQ
                     EVPEADTHRYGIIDPLTKNGRQYEVKKFVEKPAQGTAPSNLAIMGRYVLTPEIFDYLK
                     TQKEGAGNEIQLTDAIERMNNDNQVYAYDFEGERYDVGEKLGFVKTTIEYALKDDSMR
                     EELTRFIKELGL"
     gene            complement(1420..2163)
                     /gene="sarU"
                     /locus_tag="O6Y56_002547"
     CDS             complement(1420..2163)
                     /gene="sarU"
                     /locus_tag="O6Y56_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarU"
                     /protein_id="HDB5575780.1"
                     /translation="MDYQTFEKVNKLINVEAYIFFLTQELKQQYKLSLKELLILAYFY
                     YKNEHSISLKEIIGDILYKQSDVVKNIKSLSKKGFINKSRNETDERRIFVSVTPMQRK
                     KIACIINELDKIIKGFNKDRDYIKFQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFI
                     DLSILYVISSRKNEILNLKDLFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVL
                     IKINKIQDNTIKSIFTDTSKILKPRKFFF"
BASE COUNT          816 a          301 c          376 g          741 t
ORIGIN      
        1 gtagtggcac caactaaaca aaaacaatct aagaaatctg aactacctga aacaggtgga
       61 gaagaatcaa caaacaaagg tatgttgttc ggcggattat ttagcattct aggtttagca
      121 ttattacgca gaaataaaaa gaataacaaa gcataatcca taatcaatcc aaaattgacg
      181 ggtttatttc ataaattata tgaagtaagc ctgtttttta aaattaaatc aaatttccca
      241 agaaataatt acatactcaa tgacactatg aaggcgttct aattagtgtt aaaatgacgt
      301 tgatacatag atttaatact taggaaaagg agcacattaa ctttgaaaaa aataaaaaag
      361 gcaatcattc ccgctgctgg tttagggact agatttttac cagcaactaa agcgatgcca
      421 aaggaaatgc ttcctatctt agataaaccc acaatacaat atatcgttga agaagctgca
      481 agagctggaa ttgaagatat tattatagtg acaggtcgcc acaaacgcgc gattgaagat
      541 cattttgata gtcaaaaaga attagaaatg gtgttaaaag aaaaaggtaa atctgaatta
      601 ctagaaaaag ttcagtattc aacggaactt gcgaatattt tttatgtaag gcagaaagaa
      661 caaaaaggtt tagggcatgc gattagttct gcgcgtcaat ttatcggcaa tgaaccattt
      721 gcggtattat taggtgacga tattgttgaa tctgaggtgc cagcagtgaa acagttgatt
      781 gacgtttatg aagaaacggg gcactcagtt ataggtgtcc aagaagttcc ggaagcagat
      841 actcatcgtt atggaattat tgatccatta actaaaaatg gacgtcagta tgaagtgaaa
      901 aagtttgttg aaaagccagc acaaggtacg gcaccatcaa acctagctat tatggggcga
      961 tatgtattaa cgcctgaaat tttcgattat ttaaaaacgc aaaaagaagg cgcaggtaac
     1021 gaaattcagt taacagatgc gattgagcgt atgaataatg ataaccaagt gtatgcatat
     1081 gacttcgaag gcgaacgtta tgacgttgga gaaaaattag gctttgttaa aactaccata
     1141 gaatatgcat tgaaagatga cagtatgcga gaagaattaa cacgatttat taaagaatta
     1201 gggttataac attaaaaagc atgatactca ataaaattgg gacacgaaat ggtgaactaa
     1261 attgaatgag tgtcatgctt aatttatgtg ctgtgatata tagtagggta ttgaaataat
     1321 atgaaaacaa aagaaagtta attatgtatt tttatttata ctaaattgag aagtattatg
     1381 attgcttatt tattttatca agaggtaaat ctgttaaatt taaaagaaaa attttcttgg
     1441 tttgagaatc ttggaagtat ctgtgaatat gcttttaata gtgttatctt gtattttatt
     1501 tattttgatt aacacaatcc tttcatctgc aagggatcgc tctttgatta gcataccttt
     1561 attatttaat ctattaactg acctaacaat ttgaggatac ataaatctaa tgctttcaaa
     1621 caaatctttt aaatttagta tctcattttt tcgagatgat attacatata atatagataa
     1681 atcgataaat gttaaattaa atcgatattt caaaaaatct tttgagtaca taatgttcat
     1741 aaaaagtata aaaaattctt tgctatattt tggagcccat tgaaatttaa tatagtctct
     1801 atccttatta aatcctttaa ttattttatc taactcatta ataatacatg caatcttttt
     1861 acgctgcatt ggagtgactg aaacaaaaat acgacgttca tctgtttcgt ttctagactt
     1921 atttataaat ccttttttag atagtgactt gatgttcttt acaacatcag attgtttata
     1981 aagtatgtca ccaatgattt cttttagtga aatactgtgt tcatttttgt aataaaaata
     2041 tgctaatatc aacaattctt ttaatgataa tttatattgt tgctttaact cttgagtgag
     2101 aaaaaatatg tacgcttcta catttatgag tttattgacc ttttcgaaag tttgatagtc
     2161 caccttacat tctcctacta ttttctgatg tcccaatact ttatattatt taaagtaata
     2221 taaaagtaat ctct
//
LOCUS       DALMNS010000167         2212 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.167, whole genome shotgun sequence.
ACCESSION   DALMNS010000167 DALMNS010000000
VERSION     DALMNS010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.167"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(505..1434)
                     /gene="hlgA"
                     /locus_tag="O6Y56_002548"
     CDS             complement(505..1434)
                     /gene="hlgA"
                     /locus_tag="O6Y56_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-component gamma-hemolysin HlgAB subunit A"
                     /protein_id="HDB5575781.1"
                     /translation="MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIK
                     RTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMI
                     WPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFHSAPSIGGSGSFNY
                     SKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTPNGQVSAYDQYLFAQDPTGPAARD
                     YFVPDNQLPPLIQSGFNPSFITTLSHERGKGDKSEFEITYGRNMDATYAYVTRHRLAV
                     DRKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK"
     gene            complement(1926..>2212)
                     /locus_tag="O6Y56_002549"
     CDS             complement(1926..>2212)
                     /locus_tag="O6Y56_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000792575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="immunoglobulin-binding protein sbi"
                     /protein_id="HDB5575782.1"
                     /translation="DKYFKYKGTIDKTVLSVFGNGYKSYIQPLKVEDQKNYVSKSYAQ
                     VRNYVTETLNTGKVLYAFYQNPNVVKAAITTAETAASIKNIFSSFTSFFK"
BASE COUNT          681 a          289 c          359 g          883 t
ORIGIN      
        1 tattataatt aactgttcat taacaattga ccattatcaa cttttttaca attaagttaa
       61 aaatgccata attccgttca atttaacctt ttttgtttgg aatgctaaaa gacagttttg
      121 tgagaagtat agttgataaa gccttggtat tgttgacagt tgtaaacaaa ttaaggtaac
      181 cgcttgcacg aatatcttac ttttattttt aattaatgtt tgtaaaatac aaattgttct
      241 tttttgcgat ttttgatgaa tccatataaa agttaattat ttattaactt gagaatattt
      301 atttaagctt tcaagttaaa ttgcttcatc tgtattattt gtgtatctac catggcgcga
      361 tactttgttc ttataaaaat cagttgttat tattaaattt aatgtacgat aaaataattt
      421 aatgttatga ggctgattca atatgttaaa aaatcctgag acaagtatga agtgtcccag
      481 gattttataa aatgattgaa ctgtttactt aggtgtgatg cttttaattt ttacttcatg
      541 tgttttccag ttcacttcat atttaactgt aacgtttcgg tttttaaaag catcatgttt
      601 tctatcaacg gctaaacgat gtcttgtcac gtatgcatat gtagcatcca tgtttctgcc
      661 gtaagtgatt tcaaactcgc ttttatcacc tttacctctt tcgtgtgaca atgttgtaat
      721 aaatgatgga ttaaagccac tttgaattaa aggaggtagt tgattatctg ggacgaaata
      781 gtctcttgct gctggaccag ttgggtcttg tgcaaataag tattgatcat atgcagatac
      841 ttgaccattc ggtgtaacga atgaatttgc tttcactccc catttaacac ctttagagtt
      901 ctgactttct acttcagtaa catagttttt ttgattataa ctaattgttt tagagtagtt
      961 gaatgagcca ctgcctccga ttgatggcgc tgaatggaag tttccgccga tattatagcc
     1021 taatttctga ctaacatctg ctgaatcaat tttattttta ggaagataat tgattaaatc
     1081 aacattagag tctttcgttt tcaaactgat attatattga aatggccata tcattctttt
     1141 aatatatgga tattttttta agtctgaata tgttgttcta gagctgatga agccttgcat
     1201 cttaacaact agggcatctt tgttatattt tttatctttt acaaaatcaa attgaatgtt
     1261 ttgagttata gctaatcgtt tgctagtaat gtcttgtgtt cttttgatga tttctgcacc
     1321 ttggccgata tcttctatct tattttctgc tttagaaatt tctataaatg gattggctaa
     1381 aggggctatt aaaccaactg ctaaagttgc tgttaatatt ttatttttaa tcatagaaat
     1441 cactttcttt ctatttaatt ttaagttcat atatataata atccatttgt aagcgtttcc
     1501 gaattaacta ttcgttaaaa gttaattact atcaacatgt attgaaggga catttttagc
     1561 attgttaaat gatgtttttg cattatgtta tgtttaaaag atttattggt cgcaggcgtt
     1621 tatatagcta cataactatg ttttgcaagt cttattcaat taaattgtcg tttaattatg
     1681 gtgcttgtag tggtagagga atagattgcg caatagtttg tgaaaatttg aagttaataa
     1741 agttgagatg attcaactaa atgatgaact attcgttaac gatgtaagga ttatttaaca
     1801 agttgcaggt aaaaaagtgg gctgacaaat agcgaagaaa catttaattg atggaaaata
     1861 aaaaaaagaa ccgcagattc gattgagaat caacggttct ttttaatcac ggtttattac
     1921 gaaaattatt taaaaaatga tgtaaaacta gagaagatat ttttgattga tgctgctgtt
     1981 tcagctgtag ttatagcagc tttaactacg tttggatttt gataaaatgc atataatact
     2041 ttacctgtgt ttaaagtttc agttacatag tttcttactt gtgcatatga tttagataca
     2101 taattttttt gatcttcaac ttttaatggt tggatgtatg atttgtatcc attaccaaaa
     2161 actgatagta cagttttatc tattgtacct ttatatttaa aatatttatc ag
//
LOCUS       DALMNS010000168         2169 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.168, whole genome shotgun sequence.
ACCESSION   DALMNS010000168 DALMNS010000000
VERSION     DALMNS010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.168"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..292)
                     /gene="agrB"
                     /locus_tag="O6Y56_002550"
     CDS             complement(<1..292)
                     /gene="agrB"
                     /locus_tag="O6Y56_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory gene regulator AgrB"
                     /protein_id="HDB5575783.1"
                     /translation="MNYFDNKIDQFATYLQKRNNLDHIQFLQVRLGMQVLAKNIGKLI
                     VMYTLAYILNIFLFTLITNLTFYLIRRHAHGAHAPSSFWCYVESILLFILLPL"
     gene            528..662
                     /locus_tag="O6Y56_002551"
     CDS             528..662
                     /locus_tag="O6Y56_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000046022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="delta-lysin family phenol-soluble modulin"
                     /protein_id="HDB5575784.1"
                     /translation="MSCLILRIFILIKEGVISMAQDIISTISDLVKWIIDTVNKFTKK
                     "
     gene            complement(1261..2046)
                     /locus_tag="O6Y56_002552"
     CDS             complement(1261..2046)
                     /locus_tag="O6Y56_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen family hydrolase"
                     /protein_id="HDB5575785.1"
                     /translation="MKVQIYQLPIIFGDSSKNETQITQWFEKNMNDEVDVVVLPEMWN
                     NGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSG
                     QLINEYDKVHLVPMLREHEFLTAGENVAEPFQLSDGTYVTQLICYDLRFPELLRYPAR
                     SGAKIAFYVAQWPMSRLQHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINP
                     NGDLVGELNESADILTVDLNLNEVEQQRENIPVFKSIKLDLYK"
BASE COUNT          789 a          333 c          297 g          750 t
ORIGIN      
        1 ctaaaggtaa gagtataaat aataaaatac tttccacata gcaccaaaag gaagaaggtg
       61 catgtgcacc atgtgcatgt cttcttatta agtaaaatgt taaattcgta attaacgtaa
      121 acagaaaaat gtttaaaata taggcaagag tatacataac aattaattta cctatatttt
      181 tagctaagac ctgcatccct aatcgtactt gcaaaaattg aatatgatct aagttatttc
      241 tcttttgaag atacgtggca aactggtcaa ttttattatc aaaataattc aattttacac
      301 cactctcctc actgtcatta tacgatttag tacaatcttt tatcattata ttgcctaact
      361 gtaggaaata aatacttaac tgttaaatgt aatttgtatt taatatttta acataaaaaa
      421 atttacagtt aagaataaaa aacgactagt taagaaaaaa tggaaaataa atgcttttag
      481 catgttttaa tataactaga tcacagagat gtgatggaaa atagttgatg agttgtttaa
      541 ttttaagaat ttttatctta attaaggaag gagtgatttc aatggcacaa gatatcattt
      601 caacaatcag tgacttagta aaatggatta tcgacacagt gaacaaattc actaaaaaat
      661 aagatgaata attaattact ttcattgtaa atttgttatc ttcgtatagt actaaaagta
      721 tgagttatta agccatccca acttaataac catgtaaaat tagcaagtga gtaacatttg
      781 ctagtagagt tagtttcctt ggactcagtg ctatgtattt ttcttaatta tcattacaga
      841 taattatttc tagcatgtaa gctatcgtaa acaacatcga tttatcatta tttgataaat
      901 aaaatttttt tcataattaa taacatcccc aaaaatagat tgaaaaaata actgtaaaac
      961 attcccttaa taataagtat ggtcgtgagc ccctcccaag ctcgcggcct ttttttattg
     1021 taataaagaa gggaagagtt aatcctcatt atgagatcca ccgttaaaat ttatgaataa
     1081 ttctaatgtt ggaaaaggtc aaaaaaataa tcaatataat taagaaatca ttcatttgca
     1141 aagagcgaaa tggattctta ctgagttatc tattttaaaa aataaacata gacttatgaa
     1201 aaatttctca taaatctatg tttagtcatg acatgtgtta attattattt cgggcgcttc
     1261 ttatttatac aaatctaatt taatactttt aaatacaggt atattttcgc gttgctgttc
     1321 tacttcattt aagtttaaat ctacagtcaa aatatctgcg gattcattta attctccaac
     1381 taaatctcca tttgggttta taactatcga atggccagca tattctgtgt taccatcgaa
     1441 tccagtgcta ttagttccaa tgacaaacat attattttca attgcacgtg cctttagtaa
     1501 tgaatgccaa tgttgaagac gtgacatagg ccattgtgcc acataaaatg caattttagc
     1561 accactacga gcaggatatc ttaataattc tggaaaacgt aaatcataac agataagttg
     1621 ggtcacataa gtaccgtcag acaattgaaa gggttcagct acattttcgc cagcggttaa
     1681 aaattcatgc tctcttaaca taggaactaa atgaactttg tcgtattcat taatcagctg
     1741 gccactttta ttcacactaa aagctgtatt aaatatttga ttgtttctaa tgttagaaac
     1801 tgacccagct acgatatcga ctttatattt ttcagctaaa tgtttaataa atgaaaaact
     1861 ttgtcctaga ttattatctg ctttttcatt taaatgctct aaatcatagc cattattcca
     1921 catttcaggt aaaacgacta catctacttc atcattcata tttttttcga accattgcgt
     1981 tatttgagtt tcatttttag aactatctcc aaaaataatc ggtaattgat aaatttggac
     2041 tttcataaca tcacatcctt gatagatctt atatataact tactaaaagt tatgttgaaa
     2101 cgcaaaaaac gagcccagga cataaaatca aagtcctagg ctcgacaata ttatattgac
     2161 agtagttga
//
LOCUS       DALMNS010000169         2143 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.169, whole genome shotgun sequence.
ACCESSION   DALMNS010000169 DALMNS010000000
VERSION     DALMNS010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.169"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(247..1125)
                     /locus_tag="O6Y56_002553"
     CDS             complement(247..1125)
                     /locus_tag="O6Y56_002553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1963 domain-containing protein"
                     /protein_id="HDB5575786.1"
                     /translation="MLNIQDVSHLSKKEQKAYNRFVESVENGNLPILPCIEMDLKEMQ
                     EETLNQSKIGGMPFLKSFKDIPLDENNVPMVLLAQINLDDLPEQQELFPVNEGILQFW
                     ISSEDQMYGMSENLKGNNINSRLVYIKEPITDLSLENIQMHLKSLDTDNEDIPFSGAF
                     SIEFRLSKQTITCTDYKYDEDVLALWNKVNPSFALKSMFGGYDELMEPVCNTFTAKEP
                     FNQLGGYPYFDQIDPRTNDQELKMYDRVLLQIDSTRDGNSSIIWGDLGIANILVKSTD
                     LEAMKFDDYMYSWDCS"
     gene            complement(1304..1684)
                     /gene="gcvH"
                     /locus_tag="O6Y56_002554"
     CDS             complement(1304..1684)
                     /gene="gcvH"
                     /locus_tag="O6Y56_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HDB5575787.1"
                     /translation="MAVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELP
                     ETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVK
                     VEISDESQLEALLTAEKYSEMIGE"
     gene            complement(1842..>2143)
                     /locus_tag="O6Y56_002555"
     CDS             complement(1842..>2143)
                     /locus_tag="O6Y56_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Spx/MgsR family RNA polymerase-binding
                     regulatory protein"
                     /protein_id="HDB5575788.1"
                     /translation="LDEYGVSYEPIDIVQHTPTINEFKTIIANTGVEINKLFNTHGAK
                     YRELDLKNKLQILSDDEKLELLSSDGMLVKRPLAVMGDKITLGFKEDQYKETWLA"
BASE COUNT          668 a          415 c          276 g          784 t
ORIGIN      
        1 tagtcagggg ccccaacata gagaatttcg aaaagaaatt ctacaggcaa tgcgagttgg
       61 ggtgagggcc ccaacaaaga gaaattggat tcccaatttc tacagacaat gcaagttggg
      121 gtaggacgac gaaataaatt ttgagaaaat atcatttctg tcccactccc ttatcatttc
      181 tgtcccactc cctagattga tctatagtta ctacacttat taaagtaata tatttttatg
      241 attctcttag ctgcaatccc atgaatacat gtaatcatca aacttcatag cctcaaggtc
      301 agtagatttt actaagatat tggcaatacc caaatcaccc catataatcg aagaattacc
      361 atctcttgta gaatcaattt gcagtaagac tctatcatac attttcagtt cttgatcgtt
      421 cgttcttgga tctatttggt caaaatatgg ataaccacca agttgattaa atggctcctt
      481 agcagtaaat gtgttacaca caggttccat taattcatca tatccaccaa acatcgattt
      541 tagcgcgaag gatggattga ctttattcca caatgcaagc acgtcctcat cgtacttata
      601 atcagtacat gtaatagttt gtttcgacaa tctaaattct atagaaaatg ctccactgaa
      661 cgggatatcc tcattatcag tatctaatga cttcaaatgc atttgaatat tttcaagtga
      721 taaatctgta attggctctt ttatataaac aagccttgag tttatattgt ttccctttaa
      781 attttcagac ataccataca tttgatcttc tgaactaatc caaaactgca atatcccttc
      841 atttacagga aataattctt gttgttctgg aagatcatcc aaattaatct gtgctagcaa
      901 taccattggt acattatttt catctaatgg tatatcttta aaagatttta aaaatggcat
      961 tccgccaatc ttactctggt ttaatgtttc ttcttgcatc tcttttagat ccatttcaat
     1021 acatggcagt attggtaaat taccgttttc tacagattct acgaaacggt tatatgcttt
     1081 ttgctccttt ttagaaagat gactaacgtc ttgaatgttt agcatattaa cttcccccaa
     1141 tttttatttt taaaatagct aaattcatta ttttcatcat tcttgaataa caaaatgtag
     1201 caatactcca aataatagta cctaataaat tttctttcat attatttact tactcagact
     1261 aaaaataaac tcctcaatct tagattaagg agttacacgg tgattattca ccaatcattt
     1321 ctgaatattt ttcagctgtt aataaagctt caagctgact ttcatcacta atttctactt
     1381 ttaccatcca tgctttttcg tatggagatt catttacaaa ttcgggacta tcttctagtt
     1441 cttcgttgac ttcaactact ttaccagaga ttggtgcata taattctgat acagttttaa
     1501 ctgattctac gctaccaaac gtatcccctt cattaatttc atcatctgtt tctggtaatt
     1561 caacaaaaac aatatcacct aactcgcttt gtgcgtattc tgtgattcca attgttgcta
     1621 cattaccttc aactttaacc cattcatgct cttttgaata tttcaattca tttggtactg
     1681 ccaagagaat cccctcctaa ttaatcttta catcattaat gatgccataa ggctagatgc
     1741 tattcaacta tatttataaa aattaacaat tgtatagctt atttcatttt acatgtaatg
     1801 aatctaaata tcgagatatt tagtaaacgt ttacattatg cttacgctaa ccaagtctct
     1861 ttatattgat cttctttaaa tcctaatgtt atcttatcgc ccattactgc tagaggacgc
     1921 tttactaaca taccatcaga tgataacaac tctaactttt catcatctga taaaatttgt
     1981 aatttatttt tcaaatcaag ctcacgatat ttcgcgccgt gtgtattaaa caatttatta
     2041 atttctacgc ctgtatttgc aattattgtt ttaaattcat ttattgtagg tgtatgttga
     2101 acgatatcaa ttggttcata acttacgcca tattcatcta aaa
//
LOCUS       DALMNS010000170         2123 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.170, whole genome shotgun sequence.
ACCESSION   DALMNS010000170 DALMNS010000000
VERSION     DALMNS010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.170"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..>2123
                     /locus_tag="O6Y56_002556"
     CDS             <1..>2123
                     /locus_tag="O6Y56_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fibrinogen-binding adhesin SdrG C-terminal
                     domain-containing protein"
                     /protein_id="HDB5575789.1"
                     /translation="NNKKTATNRKGMIPNRLNKFSIRKYSVGTASILVGTTLIFGLSG
                     HEAKAAERTNGELNQSKNETTAPSENKTTEKVDSHQQNNIEQSTTSNQPKVNESDNTS
                     VKETTEEPQNTTSTQPTKQNNDATANKDNLAAQNISTQAKDVSATPKTTTIKPRTLNR
                     MAVNTVAAPQQGTNVNDKVHFSNIDIAIDKGHVNKDTGKTEFWATSSDVLKLKANYTI
                     DDSVKEGDTFTFKYGQYFRPGSVRLPSQTQNLYNAQGNIIAKGIYDSNTNTTTYTFTN
                     YVDQYTNVSGSIEQVAFAKRENATTDKTAYKMEVTLGNDKYSKDVIVDYGNKKAQPLI
                     SSTNYINNEDLSRNMTAYVNQPKNTYTKQTFVTNLTGYKFNPNAKNFKIYEVTNQNQF
                     VDSFTPDTSKLTDVTNQFNITYSNDNKTASVDLMNGQTSSNKQYIIQQVAYPDNSSTD
                     NGKIDYTLDTDKTKYSWSNSYSNVNGSSTANGDQKKYNLGDYVWEDTNKDGKQDANEK
                     GIKGVYVILKDSNGKELDRTTTDENGKYQFTGLSNGTYSVEFSTPAGYTPTTANAGTD
                     DAVDSDGLTTTGVIKDADNMTLDSGFYKTPKYSLGDYVWYDSNKDGKQDSTEKGIKGV
                     KVTLQNEKGEVIGTTETDENGKYRFDNLDSGKYKVIFEKPAGLTQTGTNTTEDDKDAD
                     GGEVDVTITDHDDFTLDNGYYEEET"
BASE COUNT          873 a          320 c          367 g          563 t
ORIGIN      
        1 gaataataaa aagacagcaa caaatagaaa aggcatgata cctaatcgat taaacaaatt
       61 ttcgataaga aagtattctg taggtactgc ttcaatctta gtggggacaa cattgatttt
      121 tgggttaagt ggtcatgaag ctaaagcggc agaacgtacg aatggagaat taaatcaatc
      181 aaaaaatgaa acgacagctc caagtgagaa taaaacaact gaaaaagttg atagccatca
      241 acaaaataat attgaacaaa gtacaacatc aaaccaacca aaagtaaatg agtctgataa
      301 tacttcagtt aaagaaacta ctgaagaacc tcaaaataca acttctacac aaccaactaa
      361 acaaaataac gatgcgacgg caaataaaga taatttagcg gctcaaaata tttcaacgca
      421 ggctaaagat gtttcagcta ctcctaaaac aacgactatt aaaccaagaa cattaaaccg
      481 tatggctgtg aacacagtag cggcaccaca acaaggtaca aatgttaatg ataaagttca
      541 tttttcaaat attgatattg ctattgataa aggacatgtc aataaagata ctggcaaaac
      601 tgaattttgg gcgacttcta gtgatgtttt aaaattaaaa gcgaattaca caatcgatga
      661 ttctgttaaa gagggcgata catttacatt taaatatgga cagtatttcc gtccgggttc
      721 tgtaagatta ccttcacaaa ctcaaaattt atataatgcc caaggtaata ttattgcaaa
      781 aggtatttat gatagtaata caaacacaac aacatatact tttacgaact atgtagatca
      841 atatacaaat gttagcggta gcattgaaca agtcgcattt gcgaaacgtg aaaatgcaac
      901 aactgataaa actgcttata aaatggaagt tacattagga aacgataaat atagtaaaga
      961 tgtcattgtc gattatggta acaagaaagc acaaccgctt atttcaagta caaactatat
     1021 caacaatgaa gatttatcgc gtaatatgac tgcatatgta aatcaaccta aaaatacata
     1081 tactaaacaa acgtttgtta ctaatttaac tggatataaa tttaatccaa atgcaaaaaa
     1141 cttcaaaatt tacgaagtga caaatcaaaa tcaatttgtg gatagtttca ccccagatac
     1201 ttcaaaactt acagatgtta ctaatcaatt taatattact tacagcaatg ataataagac
     1261 tgcatcagtt gatttaatga atggtcaaac aagtagtaat aaacaataca ttattcaaca
     1321 agttgcttat ccagataata gttcaacaga taatgggaaa attgattata ctttagacac
     1381 tgacaaaact aaatatagtt ggtcaaacag ttattcaaat gtgaatggct catcaactgc
     1441 taatggcgac caaaagaaat ataatctagg tgactatgta tgggaagata caaataaaga
     1501 tggtaaacaa gatgccaatg aaaaagggat taaaggtgtt tatgtcattc ttaaagatag
     1561 taacggtaaa gaattagatc gtacgacaac agatgaaaat ggtaaatatc agttcactgg
     1621 tttaagcaat ggaacttata gtgtagaatt ttcaacgcca gcaggttaca caccaactac
     1681 tgcaaatgca ggtacagatg atgctgtaga ttctgatgga ctaactacaa caggtgtcat
     1741 taaagacgct gacaacatga cattagatag tggattctac aaaacgccaa aatatagttt
     1801 aggtgattat gtttggtacg acagtaataa agatggtaaa caagattcga ctgaaaaagg
     1861 aattaaaggt gttaaagtta ctttgcaaaa cgaaaaaggc gaagtaattg gtacaactga
     1921 aacagatgaa aatggtaaat accgctttga taatttagat agtggtaaat acaaagttat
     1981 ctttgaaaag cctgctggtt taactcaaac aggtacaaat acaactgaag atgataaaga
     2041 tgccgatggt ggcgaagttg atgtaacaat tacggatcat gatgatttca cacttgataa
     2101 tggctactac gaagaagaaa cat
//
LOCUS       DALMNS010000171         2070 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.171, whole genome shotgun sequence.
ACCESSION   DALMNS010000171 DALMNS010000000
VERSION     DALMNS010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.171"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            37..1329
                     /gene="istA"
                     /locus_tag="O6Y56_002557"
     CDS             37..1329
                     /gene="istA"
                     /locus_tag="O6Y56_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HDB5575790.1"
                     /translation="MKLSLDINTDFEVTTLTDLPKLKIVMENLNMKINKSEIARHMDV
                     DRRTVDKYLNGFEPTKKRNRQSIIDKYYPIIEKLLSDTSEQKFYYKRILWQYLKDKHG
                     LTCAYSTFRAYILKHDEFNRYFMKGYQRMSPKGTTRFETKAGHQAQFDWKEGINFKTK
                     DNQIVSLNIGVLLLPYSRFVIMQVTMNKSSDVLFNLLTQAFELMGGVPNELVTDNMKT
                     VMDQPRTERTNGQINRRFKQFADDFNFKVKPCIAGRPRTKGKVESIMKILDEIHAYQG
                     ELYLEEIPKFISNLNERLNYSVHTSTGKIPIIALEKEKSFLQPLPNVNVRNSYKVKHK
                     YLKVNHSNMITYKSNQYSVPAEYCGKIVEVQVYDQKLHVYYNTKSICEHLITQRKLNY
                     QKEHYLETLSSSFGNREMDDINQIAIDNLNAIGELYDE"
     gene            1322..>2070
                     /gene="istB"
                     /locus_tag="O6Y56_002558"
     CDS             1322..>2070
                     /gene="istB"
                     /locus_tag="O6Y56_002558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013726225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HDB5575791.1"
                     /translation="MNNSTNYKRLKANLEYLKMNQMINHLDDVIDFSIKNNLSFIDTL
                     IKLSDYEIEIKEKNLIESMVKVAAFPFKKEISDFDFNFQPSINQQEIWDFTDLRFIEK
                     YQNIVFLGSSGVGKTHLATGIGMAAAKNRVSTYFIKCHHLIENLRKAKLENRLENRLK
                     HYSKYKLLIIDEIGYLPIGSEDAKLFFQLIDLRYEKKSTIFTTNINFNLWNEIFDDPK
                     IANAILDRILHHSSVVKITGKSYRLKDHSPK"
BASE COUNT          811 a          282 c          349 g          628 t
ORIGIN      
        1 aaaaacctat agataatttt attgaggtga acaacaatga aattatcttt agacataaat
       61 actgattttg aagttactac tcttacagat ttaccaaaat taaaaattgt tatggagaac
      121 ttaaacatga aaataaacaa aagtgaaata gcgagacaca tggatgttga tagaagaaca
      181 gttgataaat atttaaatgg ctttgagcca accaaaaaga gaaatcgtca gtctattatt
      241 gacaagtatt accctatcat agaaaaatta ctttcagaca ctagtgaaca aaagttctac
      301 tataagcgta ttctttggca atatttgaag gataaacatg ggttaacgtg tgcgtattct
      361 acatttagag cttatatcct taaacatgat gagtttaatc gttattttat gaaaggttat
      421 caacggatgt cgcctaaagg cacaacgaga ttcgaaacaa aagccggtca tcaagcacag
      481 tttgactgga aagaaggcat taactttaaa acgaaggata atcaaatcgt ttcactaaat
      541 ataggcgtac tactacttcc ttattcccgt tttgtaatca tgcaagtgac aatgaataaa
      601 tcaagtgatg tcttatttaa tttattgaca caagcgtttg agctaatggg aggtgtgcct
      661 aatgaacttg taacggataa catgaaaacg gtcatggatc aacccagaac agaacgtaca
      721 aatggtcaaa taaatcgtag atttaaacaa ttcgctgatg attttaattt taaagtaaaa
      781 ccttgtattg ccggccgtcc tagaacaaag ggtaaagtag aatcgataat gaaaatatta
      841 gatgaaattc atgcttatca aggcgaatta tatttggaag agattcctaa gtttatttct
      901 aatcttaatg agcgactgaa ctactcagtt catacgagta caggtaaaat acctattatt
      961 gctttagaaa aagaaaaaag tttcttacaa ccactaccga atgtgaatgt aagaaactca
     1021 tataaagtga aacataaata tttgaaagtc aaccactcta atatgattac atataagtcc
     1081 aatcaatatt cagtaccagc tgaatattgt gggaaaatag ttgaagttca agtttatgat
     1141 caaaaactac acgtttatta taacactaaa tcgatttgtg aacatctcat cacacaacgt
     1201 aaattaaatt atcaaaaaga acattattta gaaacactgt catcttcttt tggaaataga
     1261 gaaatggatg atattaatca gattgcgata gataatttga atgcgattgg agagttgtat
     1321 gatgaataat tcgacgaatt ataagcgctt aaaagcgaat ttagaatatt tgaaaatgaa
     1381 tcaaatgatt aatcatcttg atgatgttat cgattttagt attaaaaaca acctgtcatt
     1441 tatagataca ctaattaaat taagtgacta cgaaatcgaa attaaagaga aaaatttgat
     1501 tgaatcgatg gtaaaggtgg cggcatttcc gtttaaaaaa gaaatatcag attttgactt
     1561 taattttcaa ccgagcatca atcaacaaga aatttgggat tttacagatt tgcgttttat
     1621 agaaaaatat caaaacattg tctttttagg ctcaagtggc gttggtaaaa cacatttagc
     1681 tacaggcatt ggtatggctg cagctaaaaa tagagtaagt acttacttta ttaaatgtca
     1741 tcatttgata gagaatttaa gaaaagcaaa actagagaac agattagaaa atagattgaa
     1801 gcactatagc aagtataagt tattaatcat agatgagatt gggtacttac ctattggaag
     1861 tgaagatgcc aaactattct ttcaattaat agatttaaga tatgagaaga aaagtacaat
     1921 atttaccaca aatatcaatt tcaacttatg gaatgaaata tttgatgatc ccaaaatcgc
     1981 aaatgcgatt ttggatagga tattgcatca ttcaagtgta gttaaaatca ctggcaaatc
     2041 gtatagatta aaagatcatt cacctaagaa
//
LOCUS       DALMNS010000172         2035 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.172, whole genome shotgun sequence.
ACCESSION   DALMNS010000172 DALMNS010000000
VERSION     DALMNS010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.172"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..413)
                     /gene="deoC"
                     /locus_tag="O6Y56_002559"
     CDS             complement(<1..413)
                     /gene="deoC"
                     /locus_tag="O6Y56_002559"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HDB5575792.1"
                     /translation="MNSAKLIDHTLLKPESTRTQIDQIIDEAKVYNFKSVCVNPTHVK
                     YAAERLADSEVLVCTVIGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRF
                     DDVQQDIEAVVKAAKGHTVKVIIETVLLDHDEIVKA"
     gene            727..1437
                     /gene="deoD"
                     /locus_tag="O6Y56_002560"
     CDS             727..1437
                     /gene="deoD"
                     /locus_tag="O6Y56_002560"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDB5575793.1"
                     /translation="MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFND
                     VRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVN
                     LYDVIIAQAASTNSNYVDQYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSD
                     TFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPE
                     ERQNSFTQMMEIALEIAE"
     gene            complement(1558..2001)
                     /locus_tag="O6Y56_002561"
     CDS             complement(1558..2001)
                     /locus_tag="O6Y56_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDB5575794.1"
                     /translation="MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKF
                     EELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDF
                     TNISKQLEKAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLS"
BASE COUNT          636 a          369 c          313 g          717 t
ORIGIN      
        1 gcttttacga tttcgtcatg gtccaacaat accgtctcaa taatcacttt tactgtgtga
       61 cctttcgcag ctttaaccac tgcttcaata tcttgttgta catcatcaaa acgtccatct
      121 tttaatgcgc cgatgttgat gaccatgtca atttcatctg caccattttg aattgcatct
      181 tctgtttcaa atgctttcgt tgcagttgtc gacgcaccta atgggaatcc tattaccgta
      241 caaactaaca cctctgaatc agctagtcgc tctgctgcat atttaacatg cgttggattc
      301 acacatacag atttaaaatt gtatactttc gcttcatcga tgatttgatc gatttgcgta
      361 cgtgttgact caggcttcag taaagtgtga tcaatcaatt ttgcactatt cattttctat
      421 ctcctccttt atggttgatt ataaaaatac ggttgtaaat tagttgattg agcgtcaggt
      481 tcatttaaat atcaggttag atgtccgctt ttatgtaacc gcatacatat actattacat
      541 taattcattt cccataaaca aacaatacaa ttgaacatga tatcttcatt atgaacgatg
      601 acttgccaac aagctaatca ggattatatt tttataattc tttaattcta tagtacaaaa
      661 attcgcaaaa aagggaaaca aatgttatct taaaattatt aatgaatatt aaggagaaga
      721 taacaaatga caaaaggtac accacatatt caaccaaatg gagtaaaaat tgctaaaaca
      781 gtattaatgc ctggcgatcc gctacgcgca aaatatattg ctgataattt tttagaaaat
      841 gttgaacaat ttaacgatgt acgtaacatg tttggttaca ctggtacata taaaggtaaa
      901 gaagtttctg taatgggttc tggtatgggt attccaagta ttggtattta ctcatatgag
      961 ttatacaact tctttgatgt agatacaatc attcgtatcg gttcttgtgg cgcattacaa
     1021 gaaaatgtta acttatacga tgttattatt gcacaagctg catcaactaa ttcaaattat
     1081 gtagatcaat acaatattcc aggtcatttc gcacctatcg ctgacttcga gttagtaact
     1141 aaagctaaaa atgtcgctga ccaaatcggt gctactacac acgtaggtaa cgtattatct
     1201 tctgatacat tttacaatgc cgatccaaca ttcaatgatg cttggaaaaa aatgggtatt
     1261 ttaggtatcg aaatggaatc agctggttta tatttaaatg cgattcatgc tggtaaaaaa
     1321 gcacttggta ttttcacagt aagtgatcat attttacgtg acgaagctac tacacctgaa
     1381 gaacgtcaaa attcatttac acaaatgatg gaaatcgctt tagaaatcgc agagtaactt
     1441 atttaatttg agtttaattg ctctttaaca atgcgattaa actcaaaaag ccaacacatt
     1501 ctgggcgtat ccccatttat gtgttggctt ttatttatat tattacttat ctgtagatta
     1561 gcttaagtaa gatttaaaca tccaattatg tttatctact gatgtttgca tacctataaa
     1621 catatcttct gatacatcat cgccagcatt accagcaatt tcaatcgctt tttctaattg
     1681 ttttgagata ttagtgaaat cttgagataa ttcttcaacc atttgttctg cagagtaacc
     1741 tttcgcagct tctttaacaa ttgattgctc taagcattca gttaatgtac ctacagggtt
     1801 tcctcctacc gctaaaattc tttcagctaa ttcgtctaca tattgacttg cttcattata
     1861 taattcttca aatttaacgt gtaatgagaa gaagttaggt cctttcacat accagtggaa
     1921 attatgtagc tttgtataag ctactgtcca gtttgctact tgttgattca attcttttac
     1981 aacatcttgt tgattactca tatttaatac actccttaaa attgtctacg tcttg
//
LOCUS       DALMNS010000173         2021 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.173, whole genome shotgun sequence.
ACCESSION   DALMNS010000173 DALMNS010000000
VERSION     DALMNS010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.173"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(1..245)
                     /locus_tag="O6Y56_002562"
                     /pseudo
     CDS             complement(1..245)
                     /locus_tag="O6Y56_002562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001065796.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
     gene            complement(766..1044)
                     /locus_tag="O6Y56_002563"
     CDS             complement(766..1044)
                     /locus_tag="O6Y56_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000440735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575795.1"
                     /translation="MERNESNITDVTQNEEQLDNSDEQSQQNEKTFSQEEVSQLIKER
                     IARERKKSDERIKDAKENNDSNEVAYLLKGGKVTKVYGDQGSVSYMLR"
     gene            complement(1011..1139)
                     /locus_tag="O6Y56_002564"
     CDS             complement(1011..1139)
                     /locus_tag="O6Y56_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575796.1"
                     /translation="MKVIFYCPKRADDILKASMEYQSTDYKRRYISWKEMKVILLM"
     gene            complement(1200..1394)
                     /locus_tag="O6Y56_002565"
     CDS             complement(1200..1394)
                     /locus_tag="O6Y56_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000780596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LSM domain protein"
                     /protein_id="HDB5575797.1"
                     /translation="MKLWTYIGKKVMIELTNGQKFIGEVTNYDDEIDNESGEDSIHLD
                     DGIDLYDFDESQIKYIEVLK"
     gene            complement(1394..1648)
                     /locus_tag="O6Y56_002566"
     CDS             complement(1394..1648)
                     /locus_tag="O6Y56_002566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001813273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575798.1"
                     /translation="MKGKQTPSYTLLKNDELNKMLNQKFGTGRLIIENERKWKNKEII
                     NFGQIIGKYYIDGKFIETKWGTVHYSKTGSHIIPNGKEGK"
     gene            complement(1798..2021)
                     /locus_tag="O6Y56_002567"
                     /pseudo
     CDS             complement(1798..2021)
                     /locus_tag="O6Y56_002567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001282612.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
BASE COUNT          574 a          352 c          231 g          864 t
ORIGIN      
        1 tgatatttac cttcacgctc tttaaagaac ttgtctcgcc aattgccaac atatggcact
       61 gtggtacttc tacaccaagg atgcataggt ggcgcattca cacctggtat catatcttta
      121 actttaaata tttttccgtt aagtgaatga cataatttag atgttttact atctattttt
      181 gcaacatatt tatattcgcc atcttcacca agttctttta aatatgttaa tttttgtgat
      241 tttgatattt cagtaaatag ttaaaaaagt gtataaaaat agcaccgctt tctctttatc
      301 tgtgtagaaa ggatgctatt gatatttaga ctttgattga ttaatttctt tttctaattc
      361 ttctttcttc gataattctt ccatatgctt aaaaaaatct tctatagaaa tgtaaccatc
      421 taaatgttga attgacataa tgtattactc ctatttgtac tttcgtttta tatatctttt
      481 attataaagt tgctttagaa tattatcaac tatcgcttca ttatttctta tagttataga
      541 ttgttttata tctttcatta ttttataaac ttgagactga ttatataatg gagttttact
      601 tatatatttt actacaatgt agttagtaac aatagtcaat gttcggatag atttattttc
      661 aataaacatc tctaaattat tcaatgaaaa tcctgactgt ccaggatggt tatgtaacat
      721 aacaattgaa ttcggtttac tgttaaataa taattcggtt gctttttacc ttagcatata
      781 agatacacta ccttgatcac catatacttt tgtaacttta ccacctttta ataaataagc
      841 tacttcattg ctatcattgt tttctttggc atctttaata cgttcatctg attttttgcg
      901 ctctctagct atacgctctt taatcaattg tgatacttct tcttgagaaa atgttttctc
      961 attctgttgt gattgttcat cactgttgtc tagttgctct tcgttctgag ttacatcagt
     1021 aatattactt tcatttcttt ccatgagata tacctccgtt tatagtctgt cgactgatat
     1081 tccatacttg cttttaaaat gtcatcagca cgttttggac aataaaaaat aaccttcaca
     1141 ttgaaaggtt aaaaaaatgt ataaaaatag taacacattc gtttcttaca aaagtatact
     1201 tattttaaaa cttcaatata tttgatttgg ctttcatcaa aatcatataa atctattccg
     1261 tcatctaaat gtatagaatc ttctccactt tcgttatcta tttcatcgtc ataatttgta
     1321 acttctccaa taaatttttg cccattagtt aactcgatca ttactttttt accaatgtaa
     1381 gtccataact tcattactta ccttcctttc catttggaat aatatgacta ccagttttgg
     1441 aataatgaac agtaccccat ttagtttcta taaattttcc atctatgtaa tattttccta
     1501 taatttgacc aaaattaatt atttctttat ttttccattt tctttcattt tcaataatca
     1561 accgtccagt gccaaatttt tgatttagca ttttatttaa ttcatcattt tttagtagtg
     1621 tataactcgg tgtttgtttt cctttcaaca aattcttttt ttatattctt cgtatagtct
     1681 atgacctaaa gaatgtctat tctgtttttc aggatttatt tctattttta ttttaccact
     1741 ttcaatcatt tctttcatct ggtttttagc tttttcctgt aattttgctt cttttacttc
     1801 tacctgatat ttaccttcac gctctttaaa gaacttgtct cgccatttgc cgacatatgg
     1861 cactgcggta cttctacacc aaggatgcat aggtggcgca ttcacacctg gtatcatatc
     1921 tttaacttta aatagttttc cgttgagtga atgacataat ttagatgttt cactatctat
     1981 tttggcaaca tatttatatt caccatcttc accaagttct t
//
LOCUS       DALMNS010000174         1957 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.174, whole genome shotgun sequence.
ACCESSION   DALMNS010000174 DALMNS010000000
VERSION     DALMNS010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.174"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..185)
                     /locus_tag="O6Y56_002568"
     CDS             complement(<1..185)
                     /locus_tag="O6Y56_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HDB5575799.1"
                     /translation="MADESKFEQAKGNVKETVGNVTDNKNLENEGKEDKASGKAKEFV
                     ENAKEKATDFIDKVKGN"
     gene            complement(1310..1495)
                     /locus_tag="O6Y56_002569"
     CDS             complement(1310..1495)
                     /locus_tag="O6Y56_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575800.1"
                     /translation="MSDYKLKIIELIKSDITGYQIHKQTGVAQYVISQLRQGKREVDN
                     LTLNTTEKLYSYARQVL"
     gene            complement(1497..1607)
                     /locus_tag="O6Y56_002570"
     CDS             complement(1497..1607)
                     /locus_tag="O6Y56_002570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575801.1"
                     /translation="MTEQMYLILFLLSLPLLLFIGRKTHFYCLDKKNGRR"
     gene            complement(1678..1830)
                     /locus_tag="O6Y56_002571"
     CDS             complement(1678..1830)
                     /locus_tag="O6Y56_002571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575802.1"
                     /translation="MRKEVKSLMLDIIKTLLEHQVLAVLIIPEVLKQLREWHLGYLDR
                     KPNNKD"
BASE COUNT          599 a          356 c          276 g          726 t
ORIGIN      
        1 ttgttacctt ttactttatc aataaaatca gttgcttttt cttttgcatt ttcaacgaat
       61 tctttcgctt taccagaagc tttatcttct ttaccttcgt tttctaaatt tttattatca
      121 gtaacattac ctactgtttc tttaacatta ccttttgctt gttcaaattt actttcgtct
      181 gccataataa atgcctcctc ggaataatta aatgttatat ataatactta cccactgaaa
      241 aattatctaa acattttact taaataattt ttgatattga tttgacgtca ttttataact
      301 agcgaaatag attcatcatt aacttgaggg agtgggacag aaatgatatt ttcgcaaaat
      361 ttatttcgtc gtccaacccc aacttgcaca ttatcgtaag ctgacttttc gtcagcttct
      421 gtgttggggc cccaccccaa cttgcattgt ttgtagaatt tctttttgaa attctctgtg
      481 ttgggacccc gccaacttgc attgtctgta gaaattggga atccaatttc tctatgttgg
      541 ggccccgcaa ttattgtaaa aaggttgtta caatcgtatt ttcattcaat caactactgc
      601 ttatataaca ttgtaaagct ttggacattg attgaagtca cagaagcgta taggctttca
      661 tttaatacat aatgacttga taatcattta tacatagtta ttcatctctt atcatattaa
      721 atcttccaca tttcatattg attctaattt aaaaaaaact cccatcaaag ttcgcatttt
      781 ttcaatgtct actttgatgg gagcatatca gtcaatgagc tctaattaat aattatttag
      841 caggaataat tagccagatt atcaagtaag ttcaagggca atcaaaacat tgttatatat
      901 gtatttataa aattttcaag ataatttatt attcataccc ttgccctttg ttttaaaatt
      961 atgccctttt tttgcccttg aaaacaacca cactcctaaa ttaataggtg gtgtggttat
     1021 tttggttgtg tgagaataaa aaaataaccg cctcgaattc gatacggtta tctagcaaga
     1081 accacgtact tacaaatacg tttagaatct cttcgacaat cttgctatag acagtctatg
     1141 ctgttactaa attaaaccac cacacaaact tactcccatc caggaacaca gagctttgtc
     1201 gctcgtcagc aacgtcataa gaattctaag ttcatgtcgt ggtgacactt taaacggtct
     1261 gtgccagtag cgaccgagtc atttcaagaa tgaccatttc acatttatat tataacactt
     1321 gtcgtgcgta actgtatagt ttttcagttg tatttaaagt taagttatct acttcgcgct
     1381 ttccttgcct taattgtgaa attacatatt gcgctacgcc agtttgtttg tgaatttggt
     1441 aacctgttat atcacttttg atcaattcaa ttatttttaa tttataatca ctcatattat
     1501 ctacgtccat tctttttatc taaacaataa aaatgtgttt ttctcccgat aaataataac
     1561 aatggtaggc ttaataaaaa caatattaaa tacatttgtt ctgtcataat tgaaaacctc
     1621 caaataatat tatattatat aagtgtaagg aggagccatc aggctccaag cataatgtta
     1681 atctttgttg tttggctttc ggtctaggta gccgagatgc cattctctaa gttgttttaa
     1741 cacttctgga attatcagta ctgccaatac ttgatgttct agaagtgttt ttattatgtc
     1801 tagcatgagg cttttcacct ccttacgcat aatttgtaag tcatcaacta acctacaaat
     1861 ataattatac taaacaagtg tttattaagc gagtgttttt ttaatttgca taaaaaaata
     1921 ggcaagtacc gaagtacctg cctaaataac aacaaga
//
LOCUS       DALMNS010000175         1950 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.175, whole genome shotgun sequence.
ACCESSION   DALMNS010000175 DALMNS010000000
VERSION     DALMNS010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1950)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1950)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.175"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..144
                     /locus_tag="O6Y56_002572"
     CDS             <1..144
                     /locus_tag="O6Y56_002572"
                     /inference="COORDINATES: protein motif:HMM:NF023335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3427 domain-containing protein"
                     /protein_id="HDB5575803.1"
                     /translation="YFYYLGTAGYIEGSEKQDKMPNGSNVVTMDLALDKAVRDDIYRY
                     ITN"
     gene            453..1211
                     /locus_tag="O6Y56_002573"
     CDS             453..1211
                     /locus_tag="O6Y56_002573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDB5575804.1"
                     /translation="MIHSKRLRLWLYLVLLAVFISACGMKEEKQIKESFNKTLSLYPT
                     KNLEDFYDKEGFRDQEFEKGDKGTWIVDSEMVIELKGKKMESRSMVLYINCNTRTTKG
                     NFIVRELWEDSKGYAQSKEKKYPVKMEHNQIIPTKPIQDDKLKKEIENFKFFVQYGNF
                     KDINDYKNGDISYNPNVPSYSEKYQLRNDDYNVQQLRKRYDIPTKQAPKLLLKGDGDL
                     KGSSVGSKELEFTFVENKKENIYFSDSINFKPTE"
     gene            1318..>1950
                     /locus_tag="O6Y56_002574"
     CDS             1318..>1950
                     /locus_tag="O6Y56_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001838707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDB5575805.1"
                     /translation="MMIHSKRLKLCLCLIILSVFIGACGMKKEESSKDKQIKENFTKT
                     LNLYPTKNLEDFYDKEGFRDEDFDKGDKGTWIIHSKMTIETNGKNMESRGLVLYVDRN
                     TRTTKGEFIVRELWEDKKGYSRSKEKEYPVKMEHNKIIPTKPIADDKLRKEIENFKFF
                     VQYGDFKDINDYKNGDISYNPNVPSYSAKCQLKNDDYNVKQLRKRYNIPTN"
BASE COUNT          811 a          211 c          347 g          581 t
ORIGIN      
        1 tatttttatt atttaggaac tgctggatat atagaaggtt cagagaagca agataaaatg
       61 ccgaatggtt caaacgtagt aactatggat ttagcactcg ataaagctgt aagagatgat
      121 atatatcgct atataacaaa ttaatgtaaa ccgaaaaatg aatgttagta aagatgtatt
      181 taaacatcaa ttttaataag taaagacatt gagtttcagt gttattattt taaatataag
      241 cgcaatttat cttaattaat taattagttg gttaggccaa taaaaattat aaagatattt
      301 gcgcttttta aataatttgt gatgttgata tgtgaaaata caactaacaa ttaaaagcca
      361 agaggattta atcataaaat tccctctagt attattaata ttggaatttg aacttaactt
      421 tgcatcaaaa ataaaaatgg ggatgtgaaa tgatgattca ttcaaaaagg ttgaggctct
      481 ggctgtattt agtattatta gctgttttta ttagcgcgtg tggtatgaaa gaagagaaac
      541 aaatcaaaga aagtttcaat aaaacattaa gtttgtatcc aaccaaaaac cttgaagact
      601 tttatgataa agaaggcttt agagatcaag aatttgaaaa gggtgataaa ggtacttgga
      661 ttgttgattc cgagatggta attgagctaa agggtaaaaa aatggaatct agaagtatgg
      721 tgctctatat aaattgtaat actagaacaa cgaaaggtaa ttttattgtt agagaattgt
      781 gggaagatag taaagggtat gcacaaagta aagaaaaaaa atatccagtc aaaatggaac
      841 ataatcaaat tatcccaacg aagcctatac aagatgacaa gttgaaaaaa gaaattgaaa
      901 actttaaatt ttttgtacaa tatggcaatt ttaaagatat taatgattat aaaaatggtg
      961 atatttcata taatcctaat gtgccaagtt attccgaaaa atatcaattg aggaatgatg
     1021 attataatgt gcaacagtta agaaaaagat atgacatacc aacgaaacaa gcaccgaaac
     1081 tgttattaaa aggcgatggt gatttaaaag gctcatctgt agggtctaaa gagttagaat
     1141 ttacttttgt cgaaaataaa aaagaaaaca tctatttttc tgatagtatt aatttcaaac
     1201 ctactgaata gggttaatag aagtttggaa tgaaaatttc ataaagtgtt aaaaaaattt
     1261 tctcttttgt tgcataaatt aaagattgag tcagtattaa aaatataagg tggagaaatg
     1321 atgattcatt caaaaaggtt aaaattgtgt ctatgcttga taatactatc tgtttttata
     1381 ggggcttgcg gaatgaaaaa agaagaaagt agtaaagata aacaaattaa agaaaacttc
     1441 accaaaacgt tgaacctgta tccaactaaa aatcttgaag acttttatga taaggaaggt
     1501 tttcgtgacg aagattttga taaaggagat aaagggactt ggataattca ctctaaaatg
     1561 acaatagaaa caaatggaaa gaatatggaa tccagaggct tggtcctgta tgtagaccgc
     1621 aatactagaa cgacaaaagg tgaatttatt gtgagagaat tatgggaaga taaaaaagga
     1681 tactcacgta gtaaagaaaa agaatatcca gtaaaaatgg aacataataa aattatccca
     1741 accaaaccga tagctgatga taaattaaga aaagaaatcg aaaactttaa attctttgta
     1801 caatacggtg actttaaaga tattaatgat tataaaaatg gtgacatttc atataatcca
     1861 aatgttccaa gttattccgc aaaatgtcaa ttgaaaaacg atgactacaa tgtgaagcaa
     1921 cttcgaaaaa gatataatat tccaaccaac
//
LOCUS       DALMNS010000176         1909 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.176, whole genome shotgun sequence.
ACCESSION   DALMNS010000176 DALMNS010000000
VERSION     DALMNS010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1909)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1909)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1909
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.176"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(187..1779)
                     /locus_tag="O6Y56_002575"
     CDS             complement(187..1779)
                     /locus_tag="O6Y56_002575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDB5575806.1"
                     /translation="MTLLTVNPFDNVGLSALVAAVPIILFLLCLTIFKMKGIYAALTT
                     LVVTLIVALFVFELPARVSAGAITEGVVAGIFPIGYIVLMAVWLYKVSIKTGQFSIIQ
                     DSIASISEDQRIQLLLIGFCFNAFLEGAAGFGVPIAICAVLLIQLGFEPLKAAMLCLI
                     ANGAAGAFGAIGLPVSIIDTFNLSGGVTTLDVARYSALTLPILNFIIPFVLVFVIDGM
                     KGIKEILPVILTVSGTYTGLQLLLTIFHGPELADIIPSLATMVVLAFVCRKFKPKNIF
                     RLEASEHKIQKRTPKEIVFAWSPFVILTAFVLVWSAPFFKKLFQPGGALESLVIKLPI
                     PNTVSDLSPKGIALRLDLIGATGTAILLTVIITILITKLKWKSAGALLVEAIKELWLP
                     ILTISAILAIAKVMTYGGLTVAIGQGIAKAGAIFPLFSPVLGWIGVFMTGSVVNNNTL
                     FAPIQATVAQQISTSGSLLVAANTAGGVAAKLISPQSIAIATAAVKKVGEESALLKMT
                     LKYSIIFVAFICIWTFILTLIF"
BASE COUNT          663 a          366 c          280 g          600 t
ORIGIN      
        1 ttttacttac ttttctaaac aacttctgaa gcgcctcaac actttctact ctaattacat
       61 atacgacatt tttagacatt aaaaaatcga actagacaag atgctcaatg catttcgtac
      121 tagttcgatt catgaataat tagatttaaa atgtcatttg aatccaagtg acaacattat
      181 ttatatttag aatattaacg ttagtataaa tgtccaaata cagataaagg ctacaaatat
      241 aatactgtat tttaatgtca tttttaataa tgcagattct tcaccaactt ttttaacagc
      301 tgcagtcgca atggcaattg attgtggtga aataagcttc gctgctacac cacctgcagt
      361 gttagctgcc acaagtaatg aaccgcttgt cgaaatttgt tgtgccactg tcgcttgaat
      421 aggtgcgaat aaagtattgt tatttacaac tgaaccagtc ataaacacac caatccagcc
      481 taatactgga gagaataatg ggaaaattgc tcccgcttta gcaatacctt gtccaattgc
      541 tacagtcaaa ccaccgtatg tcataacttt agcaatagct aggatagctg aaattgtaag
      601 gatcggtaac cataattctt taattgcttc gaccaataaa gcacctgcac ttttccattt
      661 taacttcgta attaaaattg taataattac tgttaataaa atcgctgtcc cagttgcacc
      721 aattaaatcg agacgcaacg caattccttt aggcgataaa tcactcacag tatttggaat
      781 tggcaatttt attactagac tttcaagtgc acctccaggt tggaataatt ttttgaagaa
      841 tggtgcactc catactaata caaaggcagt taaaatgacg aacggactcc aagcaaagac
      901 aatttcttta ggcgttcgtt tttgaatttt atgttcagac gcttccaatc tgaaaatgtt
      961 tttcggttta aatttacgac aaacaaatgc taacaccacc attgttgcta gtgatggaat
     1021 aatgtctgct agttctggac catggaatat tgttaataat aattgtaatc cagtatatgt
     1081 accactcact gttaaaatga caggtaaaat ttctttaata cctttcatgc catctataac
     1141 gaatactaaa acaaatggaa taataaagtt taaaatcgga agtgttaatg ctgaatatct
     1201 cgcaacatct aatgttgtaa cgcctccact taagttaaac gtatcaataa tactaactgg
     1261 taaacctatc gcaccaaagg cacccgccgc accattagca attaagcata acatcgctgc
     1321 ttttaatggt tcaaatccaa gttgaattaa taatactgca caaatcgcaa ttggcacacc
     1381 aaatcctgct gcaccttcta aaaatgcgtt gaaacaaaat ccaattaata atagttggat
     1441 tctttggtcc tctgaaatac ttgcaatact atcttgaata atagaaaatt gtcctgtttt
     1501 aatagaaact ttatataacc aaactgccat taaaacgata tatcctattg ggaaaatacc
     1561 ggcaacaacg ccttctgtta ttgcacctgc tgatacacgt gctggtaatt cgaacacaaa
     1621 taaagccaca atcaatgtaa caaccaaagt tgtcaatgct gcataaatgc ctttcatttt
     1681 aaaaatggtt aagcataata gaaataaaat aataggtact gctgcaacta aggctgataa
     1741 tccaacatta tcgaatggat ttacagtaag tagtgtcata atgactccct ctctttatat
     1801 aaaatattta tcatcctgat taatctacaa cctatttcaa cttatatttt gcgatgatca
     1861 catatttaaa atgtaacact cctatatgtg acaggcaatc gaattttta
//
LOCUS       DALMNS010000177         1897 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.177, whole genome shotgun sequence.
ACCESSION   DALMNS010000177 DALMNS010000000
VERSION     DALMNS010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.177"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            119..847
                     /locus_tag="O6Y56_002576"
     CDS             119..847
                     /locus_tag="O6Y56_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5067 domain-containing protein"
                     /protein_id="HDB5575807.1"
                     /translation="MKKVMGILLASTLILGACGHHQDSAKKESTSHKKKENDNEELNE
                     ELKEFKSKKNMDIKIKGDTIVSDKFEAKIKEPFIINEKDEKKKYIAFKMEITAKKDDK
                     DLNPSSISHDYINITQDDKNTVNKLRDGYLLSDKKYKDWTEHNQDQIKKGKTAQAMFI
                     YELRGDGNINLNVHKYSEDKTVDSKSFKFSKLKTEDFSHRAETREEVEKKEKEFEEEY
                     KKEQEREKEKEKQKDDDHSGLDEV"
     gene            complement(1135..1749)
                     /locus_tag="O6Y56_002577"
     CDS             complement(1135..1749)
                     /locus_tag="O6Y56_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage II sporulation protein M"
                     /protein_id="HDB5575808.1"
                     /translation="MNDLSLSSFLKRSNKFMQFNCFICLILIIVFYIIGMNIQDFSDF
                     PSKDLNHKVTYNFNGFLEIFVNNAFIVPFVSLILSIIPIPYLYFIPTISTIYSLSVII
                     GVTFSYKLNEGIAIFIGILPHGILEIYLTSIELSMLFLLNTYIRKNSMNLFRKRKETL
                     PNFFVLLKSIVKCYLLIFLPVAFLCALIEITVTPTVYKFLTNII"
BASE COUNT          817 a          249 c          246 g          585 t
ORIGIN      
        1 gaattattta atatcatctt agaatctcac aaaatatcaa ctttgtttaa ttactcaaaa
       61 cgataagtcg tttagagttt ttaaaataaa tttttgcgaa ataaaggaga catgttaaat
      121 gaaaaaagta atggggatat tattagcaag tacacttatc ttaggtgctt gtggacatca
      181 tcaagatagt gcaaaaaaag agagcactag tcacaaaaag aaagaaaatg acaatgaaga
      241 attaaatgaa gaacttaaag aatttaaaag caaaaaaaat atggatataa aaattaaagg
      301 cgatactatt gttagtgaca aatttgaagc taaaataaaa gaaccgttta tcatcaatga
      361 aaaagatgag aaaaagaaat atatcgcttt taaaatggaa attactgcta aaaaagacga
      421 taaagattta aatccatctt ctatttctca tgactatatt aatatcactc aagatgataa
      481 aaatacagta aataaattaa gagatggtta tcttttaagt gataaaaaat ataaagattg
      541 gacagaacat aaccaagatc aaattaaaaa aggcaaaact gcacaagcca tgtttatcta
      601 tgagttaaga ggtgatggaa atattaattt aaatgtccat aaatactcag aagataaaac
      661 agttgattct aaatcattca aatttagtaa acttaaaacc gaagattttt ctcatagagc
      721 ggaaacaaga gaagaagtag aaaagaaaga aaaagaattt gaagaagagt acaaaaaaga
      781 acaagaacga gagaaagaaa aagaaaagca aaaagatgac gaccacagtg gtttagatga
      841 agtataaatt tatgaatgct cgcattcagc gttataatct ttgttgttat tattgtcatt
      901 ataaattagc ttacttacac tcataatgac acactaattt aattgttaaa tataacaaaa
      961 aagagtagct cgcctactct tttttgttgt tttggaatgg tcatttttga aatgactcga
     1021 ttatagtttc acgaatacca tgcaacattt ttcgtgaact catattttac aaatcaatat
     1081 ttatcgatca aaaataaacc tatacacata gttagctatg cccttttaaa agttctatat
     1141 tatattagtt aaaaatttgt aaacagttgg tgtaacagta atttcaatta aagcgcataa
     1201 aaatgccaca ggtaaaaata ttagcaggta acactttact attgatttta ataaaacaaa
     1261 aaaatttggc aatgtctctt ttctttttct aaataaattc attgaatttt ttctaatata
     1321 ggtatttaat aagaataaca ttgatagttc aatgctcgtt aagtatattt ctaaaatacc
     1381 atgaggcaaa ataccaataa aaatagctat cccttcgttt aatttatatg aaaatgtaac
     1441 cccaataata accgacaatg aataaattgt agatattgta ggaataaaat acaaatatgg
     1501 tattggtatt atcgataata taagtgacac aaaaggaact ataaaagcat tattaacaaa
     1561 tatctccaaa aacccattaa aattataagt cactttatga tttaaatctt tactaggaaa
     1621 atcactaaag tcctgtatat tcataccaat tatgtaaaat actattatta gaatcaaaca
     1681 aataaaacaa ttgaattgca taaatttgtt actgcgtttc aaaaatgaag ataaactcaa
     1741 gtcattcatt gattatgccc ccatctataa atactatttc actaaataga tacgttcact
     1801 cgcaaacgat atcatcctta aaaatctatt aaaaaccagc tatattaaaa cctttaattt
     1861 aaccatctaa aactatcaca acttttcctc attacat
//
LOCUS       DALMNS010000178         1854 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.180, whole genome shotgun sequence.
ACCESSION   DALMNS010000178 DALMNS010000000
VERSION     DALMNS010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1854)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1854)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.180"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(63..1295)
                     /locus_tag="O6Y56_002578"
                     /pseudo
     CDS             complement(63..1295)
                     /locus_tag="O6Y56_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501257.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif.; incomplete; partial in the middle
                     of a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
     gene            complement(1601..>1854)
                     /gene="sarT"
                     /locus_tag="O6Y56_002579"
     CDS             complement(1601..>1854)
                     /gene="sarT"
                     /locus_tag="O6Y56_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SarT"
                     /protein_id="HDB5575809.1"
                     /translation="NYLVLAYLDVFKNDEGKYFMRDIISYIGIDQSRIVKSVKELSKK
                     GYLNKCRDPHDSRNVIIVVSVKQHNYIKNLLSEININET"
BASE COUNT          533 a          348 c          221 g          752 t
ORIGIN      
        1 tctactgttt ttgtttctgt tttattaact agattaggcg ttagtttaaa tgttgagtta
       61 tttaaatctg ttctcatcca accatttgca tatacacctt gagatgttcc ctgtctttga
      121 ctagaagtaa ttaaaaagtt atatgcttca gatttatcca atcccaaatc tgatatatta
      181 gcttcccaaa ttttaccagc atattcggct ctcattatcc ccgatttttc attgtacgct
      241 aattttaaat tattaagtaa ttgaccatgg aattttccat ctgttgtatc aatagaatta
      301 tctgcatatt ggaatgaatt atccgcttta cctcttgttg gtatgtttgt tccaaccttt
      361 gctgtagttc catcagcacc tgtttttaca aacgtaccat accctttaaa tccttgtcct
      421 gcctgtttct cttctttatc catgggatct ttaaaattat accctgtatc aattttaaat
      481 cctgctgaat tttccattcc tttgggacct aatataccac ccttttgtaa atattcgtta
      541 ccgtcacctt tactaaataa gaacccccat ccatcagcgc cagttgttac cgattgatga
      601 ttattagcta ttctaatgtt aaactcaaag tcatttttaa atgaaacttt attctttaat
      661 tgtaatgctc ctgtcaattc gtttcttcca atacttttat tattgaaacg agtgacttca
      721 gataccttta gatcctctgg attgctttgt atatcaacac ttccgtaacc ttcaaaatgt
      781 tctttacctt gaattgtaat tggggtagat tcaactacat ttttagaatc tcttgtaata
      841 tcaaaagagc cttcatcaac agaacgagct tttctaacct taggtgtctc tgcgttatga
      901 gtgactgacg atttcggctg aacttcagca acattagcta cttcttttgg tgtatcctcc
      961 ttttttgata tatcttcagc ttttactgat ggttcatgtt cgattgtgtc tttgtttgaa
     1021 gttacttcag atttagcctc tataccttgt ggtgcagtgt ctttgtttgt tacttcttca
     1081 atcttcactt cttttgattg gacattatct tttaatgtag ttggattctc aatattgttt
     1141 tcagctgctt ctgcctcttg ttgagttccc aaatacatta gtgagccaat taaaatagat
     1201 gctgttccaa ctgtaaattt tcttattgaa tatttattca atttatttga tagaaaatct
     1261 actcttttat ttaccggtcc tttcttatct ctcatttgca tactcctttt ttccatattt
     1321 tccactttac ttacagtgaa tttacatgta attttacaaa tacaatagga gttgcacaat
     1381 ggaatataac acttatcttt ataaaattat tttatatatt gacacactta aaacaatcta
     1441 caaataaaaa tattattttt agttttcaat gaataattca ttcttatctg ttggaaaaac
     1501 ccaccaactc aatagcattg aatttctaaa ataaaaaata ccttaacgca tttaaaaata
     1561 catttaactg caccaagata ttaaaatctc gaaacatacc ttatgtttca ttaatattta
     1621 tttcactcaa aagattttta atataattgt gttgttttac agaaacaacg atgattacat
     1681 ttctactatc atgggggtct ctacatttat tcaagtaacc cttttttgat aattctttta
     1741 cgcttttaac aatcctagac tggtctatac cgatataact tataatgtct ctcataaaat
     1801 atttaccttc atcattttta aatacatcta aatatgctaa tactaaataa ttat
//
LOCUS       DALMNS010000179         1820 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.181, whole genome shotgun sequence.
ACCESSION   DALMNS010000179 DALMNS010000000
VERSION     DALMNS010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.181"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..503
                     /locus_tag="O6Y56_002580"
     CDS             <1..503
                     /locus_tag="O6Y56_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HDB5575810.1"
                     /translation="EFKGNNIPYEYAAGADVSDSINGNPIKSFPFEVTELPEGTKYLA
                     WSLIDYDAIPVCGFAWIHWSVANVSVSGNSISIKADLSRTKGDYVQGKNSFTSGLLAE
                     DFSEIENHYVGPTPPDKDHQYELTVYALGHSLNLKNGFYLNEFLKEVNQHKIDQTSIN
                     LIGRKI"
     gene            814..1248
                     /locus_tag="O6Y56_002581"
     CDS             814..1248
                     /locus_tag="O6Y56_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000769690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAP domain-containing protein"
                     /protein_id="HDB5575811.1"
                     /translation="MKLKSFITVTLALGMIATTGATVASNEVSAAEKDKLPATQKAKE
                     MQNVPYTIAVDGIMAFNQSYLNLPKDSQLSYLDLGNKVKALLYDERGVTPEKIRNAKS
                     AVYTITWKDGSKKEVDLKKDSYTANLFDSNSIKQIDINVKTK"
     gene            complement(1505..1690)
                     /locus_tag="O6Y56_002582"
     CDS             complement(1505..1690)
                     /locus_tag="O6Y56_002582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjzD family protein"
                     /protein_id="HDB5575812.1"
                     /translation="MKHLVTFFWALLLMQMVNFVLNSLVGGDSLNVVNPIIMAVLFTI
                     FTAIFAAVIKPPKDSSQ"
BASE COUNT          690 a          235 c          292 g          603 t
ORIGIN      
        1 ctgaatttaa agggaacaat ataccatatg aatacgcagc aggtgcagat gtgagtgatt
       61 ctattaacgg gaatccaatt aaatcatttc catttgaagt aactgaatta ccggaaggga
      121 ctaaatatct tgcttggtct ttaattgact atgatgcaat tcctgtgtgt ggctttgcat
      181 ggattcattg gagtgtagct aatgtaagtg ttagtggcaa ttcaatttct ataaaagcag
      241 atttatcaag aacaaagggt gactatgtac aaggtaaaaa tagctttact agtgggttgt
      301 tggctgaaga tttttcagaa atagaaaatc actatgtagg accaacacca cctgataaag
      361 atcatcaata tgaattaacc gtttatgcat taggtcattc tttaaatttg aagaatgggt
      421 tctacttgaa tgaattttta aaagaagtaa atcaacataa aattgatcaa acaagtatta
      481 accttatagg aagaaaaatt taatactaaa tatctcatca atataaaatt gttcaattaa
      541 aagtatgaag aaacaaggga tttaatttat atattaggta cggcgttcgc tataatgcaa
      601 agaagtaatt aaatttaagt aatgtaaact tagttattgt aatgtgaatt tattcgaaaa
      661 aatagaaagt attaacaatt atagctttta cattaattaa aattaatttt taaaaacaag
      721 taaacaattt acatacttat aatttttgaa acttttagat ttgtgttata ttgattttgt
      781 aagatacttt aactcacaaa ggagagagat tatatgaaat taaaatcatt tataactgta
      841 actttggcac tgggcatgat cgcaacgact ggcgctactg tggcaagtaa tgaggtatct
      901 gcagcagaaa aggacaaact accggcaact caaaaagcta aagaaatgca aaatgttcca
      961 tatacaatcg cagtagatgg cattatggct ttcaatcaat cttacttaaa tttaccaaaa
     1021 gatagccaat tatcatattt agatttaggg aataaagtta aagctttatt atatgatgaa
     1081 cgtggtgtaa cgcctgagaa gattcgaaat gcaaaatctg ccgtttacac gattacttgg
     1141 aaagatggca gtaaaaaaga agttgattta aagaaagata gttatacagc aaacttgttt
     1201 gattcaaatt caattaaaca aattgatatt aatgtaaaaa ctaaataaac acttaaaatt
     1261 atcaaattca acatgaagca tttaatttta cagtgatgat tataatataa ttgccttgat
     1321 acaaagatta ctcgtaaatg acatctttgt attaaggctt tttctaaatt ttaatgtgat
     1381 gggttagagg tcattgagct ttaaaatatt cataatacaa aacattaatg gccaaaaata
     1441 aaagccgcct ttatctgggc agcttcaata ataagaaaga catatttcat tttatactaa
     1501 atagttattg tgatgaatct ttcggtggtt taattactgc agcaaaaatt gctgtaaaaa
     1561 tcgtgaacaa tactgccatg ataattggat tcactacatt taagctgtct ccacctacta
     1621 ggctattaag tacaaagtta accatttgca ttaataataa tgcccaaaag aatgttacga
     1681 ggtgtttcat gtcattctac ctccacttta attatatata ttttatttta agtgaaagtt
     1741 agaaatttgt atagtaacat ctcatatatt ttgaccatat tatacagttt aaataaatga
     1801 ttttatctga atggctattc
//
LOCUS       DALMNS010000180         1806 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.182, whole genome shotgun sequence.
ACCESSION   DALMNS010000180 DALMNS010000000
VERSION     DALMNS010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1806)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1806)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.182"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..264
                     /locus_tag="O6Y56_002583"
     CDS             <1..264
                     /locus_tag="O6Y56_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575813.1"
                     /translation="LLTIKRGNIEKDRFSISIIFKDTYHTLVRIDINGDTHDNPDGTI
                     APKSHIHIYNDKCDKKDRFAYEINLKDFPDIYNLYNVYMSFLE"
     gene            301..1089
                     /locus_tag="O6Y56_002584"
     CDS             301..1089
                     /locus_tag="O6Y56_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1828 domain-containing protein"
                     /protein_id="HDB5575814.1"
                     /translation="MTTFDAKKLKKEYLDWYNQILEFSNLSNNVVKIDTPFKDNSLDN
                     LKIYALYDQSRDMITLTDDGYTTFGLENNGVSLNKFKKRKKIFEEHLSAYGTKYNDKT
                     HEIYVQTNFKNFNKSKHNLLQCLIFVSDMYLLSNPKSQNIFSEDVANKFDEHNIYYGR
                     DLPIIGSSGVVHNFDFFISAKKNQKEKFINAISNPNNSMIIKSKITDAMQAKKIKRHR
                     QNEFIFILNDSKKEKNEHNKNLLHENYISTIDYSELDEKIGLLI"
BASE COUNT          736 a          251 c          248 g          571 t
ORIGIN      
        1 ttattaacaa taaaaagagg gaacatagaa aaagataggt tttcaatttc aatcattttc
       61 aaagatacct atcacaccct agttagaata gatattaacg gtgatactca cgataatcca
      121 gatggaacaa tcgctccgaa aagtcatatt cacatatata atgataagtg tgataaaaag
      181 gataggtttg cttatgaaat taacttgaaa gatttccccg acatctataa cttgtataat
      241 gtgtatatgt cgtttttaga gtaaaataat ataaaagacc ttgaataaag gagggataat
      301 atgactacgt ttgatgctaa aaaattaaaa aaagaatatc ttgattggta taaccagatc
      361 ttagagtttt ctaatttatc aaacaatgtt gtaaaaatag ataccccttt taaagataat
      421 tctttagata atttaaaaat atacgcttta tacgatcagt ccagagacat gattacactg
      481 actgatgacg gctatactac atttggttta gaaaataacg gtgtttcttt aaataaattc
      541 aaaaaacgta aaaagatttt tgaagagcat ctttcagcct acggtactaa atacaacgat
      601 aagacccacg aaatttatgt tcaaactaac tttaaaaatt ttaataaatc taaacataat
      661 ttattacagt gccttatatt tgttagtgat atgtacttac tttctaatcc taagtcacaa
      721 aacatatttt cagaagatgt tgcaaacaaa tttgatgaac ataacattta ttacggaaga
      781 gatttaccta ttataggaag cagtggtgtt gttcataatt ttgacttttt tattagcgct
      841 aagaaaaacc aaaaagaaaa atttatcaat gctatttcta atcctaataa ttctatgatt
      901 attaagtcga aaataacaga tgctatgcaa gcaaaaaaaa taaaaagaca caggcaaaat
      961 gagtttattt ttattttaaa tgactcaaaa aaagaaaaaa atgaacataa taaaaacctt
     1021 cttcatgaaa actatataag tactatagat tatagtgaat tagacgaaaa gataggttta
     1081 ttgatttaat atttctggac gtgataatat caattttttt attaaatgag agaaatttga
     1141 aaaattcgaa acagcttaag atagcaactt gaatagtctt atagataatg cagaatcgtc
     1201 tacacttagt tgaacaaatt ctatgagaat agatattgtt aaactatttg gataggcgat
     1261 tttattttga caagagtcag aagaacatct attaaggatt tcaaattaca aatggttaaa
     1321 ctttataaaa atggtatgac tagaatcgaa attatacgcg aatacgattt aacactctca
     1381 atcttctcga actgaataaa tactgggtca ttcaatcatc aagacaactt aataaatgat
     1441 gataaatgtt cataccattt tgcaaatata accagatact cttaacaaaa tgtagagttc
     1501 aaaattaaaa atgtccctaa ttggcacatt gctgtatgat aataaattca acttagattt
     1561 caacaatata actaatgcag cttatattta ccgcgatatc aaaccaaaca gcccatccac
     1621 aaacaaatta gaatacatca tgttagtaat agtaaatgat atatatcttc caaagagcgc
     1681 aaactgtagc agaacatgag aaccttgcga ttttgaaatg gtctaataaa tctaataaca
     1741 ttgaagtttt aatcacataa actaacagta gtcccctgtt cgcaattcta taaattacaa
     1801 atgcaa
//
LOCUS       DALMNS010000181         1706 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.183, whole genome shotgun sequence.
ACCESSION   DALMNS010000181 DALMNS010000000
VERSION     DALMNS010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.183"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            99..473
                     /locus_tag="O6Y56_002585"
     CDS             99..473
                     /locus_tag="O6Y56_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SarA family transcriptional regulator"
                     /protein_id="HDB5575815.1"
                     /translation="MAITKINDCFELLSMVTYADKLKSLIKKEFSISFEEFAVLTYIS
                     ENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRK
                     KIESLLSRVNKRITEANNEIEL"
     gene            complement(726..1514)
                     /locus_tag="O6Y56_002586"
     CDS             complement(726..1514)
                     /locus_tag="O6Y56_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDB5575816.1"
                     /translation="MNKVTINPQIQLTYQIEGKGDPIILLHGLDGNLAGFEDLQHQLA
                     SSYKVLTYDLRGHGKSSKSESYDLNDHVEDLKILMEKLNIHEAHILGHDLGGVVAKLF
                     TDKYAYRVKSLTTIASKKDDLIHSFTQLLIQYQDDIAGFNKSEAYILLFSKLFRNQEK
                     TMKWYQKQRIYSIKSEDDSAVAIRSLILHKDEPMYLKKRTCVPTLLINGEHDPLIKDK
                     NHFKLEAHFLNVTKKIFEHSGHAPHIEEPEAFLSYYLNFLKSVS"
BASE COUNT          621 a          266 c          221 g          598 t
ORIGIN      
        1 attatgacta acatatctat aataaataaa gattagatat caatatatta tcgggcaaat
       61 gtatcgagca agatgcatca aatagggagg ttttaaacat ggcaattaca aaaatcaatg
      121 attgctttga gttgttatca atggtcactt atgctgacaa attaaaaagt ttaattaaaa
      181 aggaattttc aattagcttt gaagaattcg ctgtattgac atacatcagc gaaaacaaag
      241 agaaagaata ctatcttaaa gatattatta atcatttaaa ctacaaacaa ccacaagttg
      301 ttaaagcagt taaaatttta tctcaagaag attacttcga taaaaaacgt aatgagcatg
      361 atgaaagaac tgtattaatt cttgttaatg cacaacaacg taaaaaaatc gaatcattat
      421 tgagtcgagt aaataaacga atcactgaag caaacaacga aattgaacta taattttgtt
      481 tagcgcaatt tggtgaagtt tgatagatga tacattctat taaacttcct ttttttatgc
      541 tctttttacc taattgttaa gaggttttgc actaatggca cttaatataa ggaagatagc
      601 cgcttaacga gcagtatata tatcaaatac atttcaaaaa aagctgatta ctatcaaata
      661 attaatagta atcagctttt tcacattgcc taaggacttt atgccctagg tttatatatc
      721 aaatattatg atacgctttt taagaaattt agataataac ttagaaatgc ttctggttct
      781 tcaatatgcg gtgcatgtcc tgaatgttcg aagatttttt tcgttacatt taaaaaatgc
      841 gcttccaatt taaaatgatt cttatcttta atcaaaggat catgttcccc attaattaac
      901 aaagtaggta cacatgtacg tttttttaaa tacataggtt catctttatg caaaattaat
      961 gaacgaattg ccaccgcact atcatcctca gacttaatgc tatatattct ttgtttttga
     1021 taccatttca tcgtcttctc ttgatttcta aacaatttag aaaataaaag aatatacgct
     1081 tcagacttat taaaacccgc tatatcatct tgatattgaa ttaacaattg agtaaagctg
     1141 tgtattaagt catctttctt cgatgcaatg gtagttaatg attttacacg ataagcatat
     1201 ttatctgtaa ataacttagc aactacccca cctaaatcat gtcctagaat atgtgcctca
     1261 tgaatattta acttctccat tagaattttt aaatcctcaa cgtgatcgtt taaatcgtat
     1321 gattcacttt tagaagactt gccatgacct cttaaatcgt aagtaagtac tttatatgat
     1381 gatgctagtt gatgttgcaa atcttcaaat ccagctaaat taccatccaa gccatgaagt
     1441 aatattatag gatccccttt accttcaatt tgataagtta attggatttg aggattaatt
     1501 gtgactttat tcattgtgac acctccctca ataaactata tacccaacct tcattctata
     1561 tacgcttcca ttttataaac aattttttta aattatttat aaattacaaa aagttattcc
     1621 aacaataaaa aaactattca tctcaattaa tacaattaat caagtgaata gttttatcat
     1681 atttataatc ttgtacgtga agataa
//
LOCUS       DALMNS010000182         1677 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.184, whole genome shotgun sequence.
ACCESSION   DALMNS010000182 DALMNS010000000
VERSION     DALMNS010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.184"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            388..567
                     /locus_tag="O6Y56_002587"
     CDS             388..567
                     /locus_tag="O6Y56_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575817.1"
                     /translation="MKFKTTKECKSNNIFKRSQEINNRESEKGCLWGISMLILLFLLI
                     LFGITACSSSIHFIN"
     gene            878..1138
                     /locus_tag="O6Y56_002588"
     CDS             878..1138
                     /locus_tag="O6Y56_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575818.1"
                     /translation="MCIVIYLIYSLIVYFICIINFFIMAAPFLMTNADYVWTPMTTVT
                     LFILSLIIFLIFIKTKDVVHLTIFILNLLFSILYCLPILFYL"
     gene            complement(1191..1541)
                     /gene="scn"
                     /locus_tag="O6Y56_002589"
     CDS             complement(1191..1541)
                     /gene="scn"
                     /locus_tag="O6Y56_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement inhibitor SCIN-A"
                     /protein_id="HDB5575819.1"
                     /translation="MKIRKSILAGTLAIVLASPLVTNLDKNEAQASTSLPTSNEYQNE
                     KLANELKSLLDELNVNELATGSLNTYYKRTIKISGLKAMYALKSKDFKKMSEAKYQLQ
                     KIYNEIDEALKSKY"
BASE COUNT          571 a          208 c          209 g          689 t
ORIGIN      
        1 gagactttta acataaaatt acttatcatt caaaaagtaa aacagcataa tatcaaggtt
       61 tataacttta tcattatcaa taatacctca tataaaataa aattttaggg actttttagg
      121 gactttaaat ttaaaattac aagtttaata gaaacatcaa aataatcaca tgtttgtgtg
      181 gaatgtacac cccaaaagct agactgaaaa atctattttt tgaggtgtat ttttataggt
      241 aaatataata aattagagta gacaactcag aattccaatt ttataataat attgcttgac
      301 atatcaaact agatagtact attttgaata tattattata atcaaaaatt cattgtaaac
      361 ttttagacaa aaggaagtaa taaaaacgtg aaatttaaaa caactaaaga atgtaaaagt
      421 aataatatct ttaaaagaag tcaagaaatt aataatagag aaagtgaaaa gggttgttta
      481 tggggcatta gcatgttgat tctacttttc ttattgattc tgtttggaat aactgcttgt
      541 tcatcaagca ttcactttat taattagatt tttttacttg gaggtatcat gtgaagaacc
      601 atacaaatat aattaatatc ttattagtta tagtcaactc attaactcat tttctaactc
      661 taaacacctc attttttaat aattcagcat cggatttctg ttttatcata ggggctatat
      721 ttttcttaat cggaattttt gttgcaatat acggtatgaa gcgagcaaca tattggttaa
      781 acttattgat tttatttacc aatatttttt attttctaca cttctgtgtg ttacttttgt
      841 taaaatatat aggatttaaa ttatttattt atgaagggtg tgtattgtta tttatctaat
      901 ttatagtcta attgtctatt tcatctgcat tataaatttt ttcataatgg ctgcaccatt
      961 cttaatgact aatgctgatt atgtatggac gcctatgact acagttacgt tatttatttt
     1021 gagtttgatt attttcttga tatttataaa aacaaaagat gtcgttcatt taacaatttt
     1081 catattaaac ttactttttt caatacttta ttgtttgcct atactgtttt atttatgaac
     1141 acttttatat tatctagaaa attaaaacca cccgtaaaag ggtggttttt ttaatattta
     1201 ctttttagtg cttcgtcaat ttcgttataa atcttttgaa gttgatattt tgcttctgac
     1261 attttcttaa agtcttttga cttaagagca tacattgctt ttagacctga aatttttata
     1321 gttcgcttat aataagtgtt taaacttcca gtagctaatt cattaacatt tagttcatct
     1381 aataacgatt ttaattcatt agctaacttt tcgttttgat attcattcga tgttggcaag
     1441 cttgtgctag cttgtgcctc atttttatct agattagtta ctagtggtga tgctaaaacg
     1501 attgctaaag ttcccgcaag tatagatttt ctaattttca ttttttattc tccttagtaa
     1561 ttagtactaa tttattttaa tgactaacta aaaaaaagta cattaattat tcattaacta
     1621 tatagatctt cttattaaat gaaaattaat aaattatcaa attgacatac cttattg
//
LOCUS       DALMNS010000183         1673 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.185, whole genome shotgun sequence.
ACCESSION   DALMNS010000183 DALMNS010000000
VERSION     DALMNS010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.185"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..1636
                     /locus_tag="O6Y56_002590"
     rRNA            <1..1636
                     /locus_tag="O6Y56_002590"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          435 a          362 c          503 g          373 t
ORIGIN      
        1 gagaatgccg gtgtgagtag cgaaagacgg gtgagaatcc cgtccaccga ttgactaagg
       61 tttccagagg aaggctcgtc cgctctgggt tagtcgggtc ctaagctgag gccgacaggc
      121 gtaggcgatg gataacaggt tgatattcct gtaccaccta taatcgtttt aatcgatggg
      181 gggacgcagt aggataggcg aagcgtgcga ttggattgca cgtctaagca gtaaggctga
      241 gtattaggca aatccggtac tcgttaaggc tgagctgtga tggggagaag acattgtgtc
      301 ttcgagtcgt tgatttcaca ctgccgagaa aagcctctag atagaaaata ggtgcccgta
      361 ccgcaaaccg acacaggtag tcaagatgag aattctaagg tgagcgagcg aactctcgtt
      421 aaggaactcg gcaaaatgac cccgtaactt cgggagaagg ggtgctcttt agggttaacg
      481 cccagaagag ccgcagtgaa taggcccaag cgactgttta tcaaaaacac aggtctctgc
      541 taaaccgtaa ggtgatgtat aggggctgac gcctgcccgg tgctggaagg ttaagaggag
      601 tggttagctt ctgcgaagct acgaatcgaa gccccagtaa acggcggccg taactataac
      661 ggtcctaagg tagcgaaatt ccttgtcggg taagttccga cccgcacgaa aggcgtaacg
      721 atttgggcac tgtctcaacg agagactcgg tgaaatcata gtacctgtga agatgcaggt
      781 tacccgcgac aggacggaaa gaccccgtgg agctttactg tagcctgata ttgaaattcg
      841 gcacagcttg tacaggatag gtaggagcct ttgaaacgtg agcgctagct tacgtggagg
      901 cgctggtggg atactaccct agctgtgttg gctttctaac ccgcaccact tatcgtggtg
      961 ggagacagtg tcaggcgggc agtttgactg gggcggtcgc ctcctaaaag gtaacggagg
     1021 cgctcaaagg ttccctcaga atggttggaa atcattcata gagtgtaaag gcataaggga
     1081 gcttgactgc gagacctaca agtcgagcag ggtcgaaaga cggacttagt gatccggtgg
     1141 ttccgcatgg aagggccatc gctcaacgga taaaagctac cccggggata acaggcttat
     1201 ctcccccaag agttcacatc gacggggagg tttggcacct cgatgtcggc tcatcgcatc
     1261 ctggggctgt agtcggtccc aagggttggg ctgttcgccc attaaagcgg tacgcgagct
     1321 gggttcagaa cgtcgtgaga cagttcggtc cctatccgtc gtgggcgtag gaaatttgag
     1381 aggagctgtc cttagtacga gaggaccggg atggacatac ctctggtgta ccagttgtcg
     1441 tgccaacggc atagctgggt agctatgtgt ggacgggata agtgctgaaa gcatctaagc
     1501 atgaagcccc cctcaagatg agatttccca acttcggtta taagatccct caaagatgat
     1561 gaggttaata ggttcgaggt ggaagcatgg tgacatgtgg agctgacgaa tactaatcga
     1621 tcgaagactt aatcaaaata aatgttttgc gaagcaaaat cacttttact tac
//
LOCUS       DALMNS010000184         1663 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.186, whole genome shotgun sequence.
ACCESSION   DALMNS010000184 DALMNS010000000
VERSION     DALMNS010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.186"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(173..943)
                     /locus_tag="O6Y56_002591"
     CDS             complement(173..943)
                     /locus_tag="O6Y56_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDB5575820.1"
                     /translation="MGTLIKQECFKLFKKKSTFIAPIVFILLMVAQGYIATKYNKIFT
                     PQESFTSAYNGFSWFAFLLIIQASTIISMEFHYGTIKNLLYREYSRTTMIVSKIITLF
                     IISLIYFVITIIASIVIGSLFFNDLNIFESSGNQLSLLNQLLLVSLGTFIGVWLVLSL
                     TLLLSSATNSTGVAIAVGIVFYFASSILAVIQTALLEKIDWLKWNPINMMNIMLQTVE
                     KGFSKSTKLELHELFIGNIAYISIFLILVVFIFKKKNI"
     gene            complement(945..1640)
                     /locus_tag="O6Y56_002592"
     CDS             complement(945..1640)
                     /locus_tag="O6Y56_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDB5575821.1"
                     /translation="MDVLTIEHLTKKIGNKTILEDVSFKLKRGQIVGLVGANGAGKTT
                     LMKVILGYSSFQSGNFNVINSKDSKNNIGALIENPGIYPFMSGYENLKLLNESKNTKD
                     IDKIVSQLHMDEYIHKKAKTYSLGMKQKLGIAIAFLNDPQFIILDEPMNGLDPKAVRD
                     VRELIVQKAQEGVTFLISSHILSELVKITNSILIINKGKIVTETSEEELKQFKDNDLE
                     NVLLEIIEREDQA"
BASE COUNT          587 a          264 c          220 g          592 t
ORIGIN      
        1 ttattctcat atatcaagta aagtgacaca ctgccaaata tattaaagat agaatgcgtg
       61 gcatgctgac atatcaaaaa tccccgcacc attatttggg tgaagggatt tgaaaatgat
      121 tttgaattac gatggaataa gtgtgtattt attcatctaa tactttaagt tactaaatat
      181 ttttcttctt gaaaataaat actacaagta ttaagaaaat agaaatataa gcaatattac
      241 caataaacaa ttcatgaagt tctaatttcg tcgacttact aaagcctttt tcaactgttt
      301 gaagcataat attcatcata ttaataggat tccactttag ccagtctatt ttttctaaaa
      361 gtgccgtttg aataactgct aaaatagaac ttgcaaaata aaaaacaata cctacagcaa
      421 tggctacacc cgttgaatta gttgcagatg ataatagcaa cgttaagctt aaaactaacc
      481 aaacgccaat aaatgtacct aaactaacta ataataattg attcaataaa gataattgat
      541 taccgctact ttcaaatata tttaaatcat taaagaataa agacccaata acaattgaag
      601 caataattgt aataacaaaa taaattaaag aaataataaa taacgtgatg attttgctaa
      661 caatcatagt tgttcttgaa tattcacgat agagtaaatt tttaatcgta ccgtaatgaa
      721 attccattga aatgattgtg cttgcttgaa taattaataa aaatgcaaac catgaaaaac
      781 cattataagc agatgtgaaa gattcctgtg gcgtaaaaat tttattgtat tttgtagcaa
      841 tataaccttg agcaaccatt agtagaataa agacaatagg tgcgataaaa gttgatttct
      901 ttttaaataa tttgaaacat tcttgtttaa ttaaagttcc cattttatgc ttggtcctcc
      961 ctttctatga tttctagtaa tacattttct aaatcattat ctttaaattg tttaagttct
     1021 tcttccgatg tttctgtaac aattttacct ttgttaataa taaggataga gtttgtgatt
     1081 ttaactaatt cacttaaaat atgactcgaa attaagaaag tgacaccttc ttgcgctttt
     1141 tggacaatca attcacgtac atctcgcaca gcttttggat ctaagccgtt cattggttca
     1201 tctaagataa taaattgagg gtcatttaaa aatgctatag caattcctaa tttttgcttc
     1261 ataccaagag aatacgtttt agctttttta tgaatgtatt catccatatg aagttgtgag
     1321 acaattttat cgatatcttt agtgtttttt gattcgttca ataacttcaa gttttcatat
     1381 ccagacataa aaggatatat tcctggattt tcaatcaatg caccgatatt gtttttactg
     1441 tccttgctgt taataacatt aaaattcccg ctttggaaac tagagtaacc taatataact
     1501 ttcattaaag ttgttttacc cgcaccattc gccccaacaa gaccaactat ttgtccgcgt
     1561 ttcagcttaa atgatacatc ttcgagaatc gttttgttgc ctatcttctt tgttaaatgt
     1621 tctattgtta aaacatccat atcactatct cctttgctat taa
//
LOCUS       DALMNS010000185         1627 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.187, whole genome shotgun sequence.
ACCESSION   DALMNS010000185 DALMNS010000000
VERSION     DALMNS010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.187"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            263..988
                     /locus_tag="O6Y56_002593"
     CDS             263..988
                     /locus_tag="O6Y56_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL14"
                     /protein_id="HDB5575822.1"
                     /translation="MKKNIMNKLVLSTALLLLGTTSTQLPKTPISFSSEAKAYNISEN
                     ETNINELIKYYSQPHLSLSNKWLWQKPNGSIHATLQTWVWYSHIQVFGSESWGNINQL
                     RNKYVDIFGTKDEDTVEGYWTYDETFTGGVTPAATSSDKPYRLFLKYSDKQQTIIGGH
                     EFYKGNKPVLTLKELDFRIRQTLIKNKKLYNGEFNKGQIKITADGNNYTIDLSKKLKL
                     TDTNRYVKNPKNAQIEVILEKSN"
     gene            1083..>1627
                     /locus_tag="O6Y56_002594"
     CDS             1083..>1627
                     /locus_tag="O6Y56_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein"
                     /protein_id="HDB5575823.1"
                     /translation="MNNNITKKIILSTTLLLLGTASTQFPNTPISSSTEAKAYYINQN
                     ETNVNELTKYYSQQHLTFSNKTLWQKDNGTIHATLLQFSWYSHIQVYGPESWGNINQL
                     RNKSVDIFGIKDQETIDSFALSQETFTGGVTPAATSNDKHYKLNVTYKDKAETFTGGF
                     PVYEGNKPVLTLKELDFRIRQT"
BASE COUNT          627 a          248 c          236 g          516 t
ORIGIN      
        1 ttttcaagta gttagaaaat tcaattatca aacaatttaa tgcaattgat tagagaataa
       61 ttctaatgtg tcgtttttaa tatataactc cagcctactt tattaggtac tgtttctgtc
      121 caaaacttaa aaatgataag ttttgcttaa ataacactac taactgttta agtttattta
      181 acatagtttt agcttttatt taattccgaa tcggtgtaat agcttatata ctttgggtaa
      241 ttcacgcaaa ggagattttc atatgaaaaa gaacatcatg aataaattag ttttatcaac
      301 agcattgtta cttttaggaa ccacatcaac acaacttcct aaaacaccaa tcagtttttc
      361 atctgaagca aaagcctata atatcagtga aaacgagact aatatcaatg agttaataaa
      421 gtattattca cagcctcatt tatcactttc aaataaatgg ttatggcaaa agcccaatgg
      481 tagcattcat gcaacattgc aaacgtgggt ttggtatagt catattcaag tgtttggatc
      541 cgagagttgg ggaaacatta atcagttaag aaataaatac gttgatatat ttggaactaa
      601 agatgaggac acagttgaag gttactggac ttatgatgaa acatttactg gtggtgttac
      661 gccagcagct acttcatctg ataagcctta tagactattt ttaaaatata gtgataaaca
      721 acaaactatc atcggtggac atgaatttta caaaggaaat aaaccagtat taactttaaa
      781 agaattagat ttccgtattc gtcaaacatt aataaagaat aaaaagttat ataacggaga
      841 atttaataaa ggtcaaatta agataactgc tgatggaaat aattacacga ttgatttaag
      901 taaaaaatta aaattaactg atacaaaccg ttatgttaaa aatcctaaaa atgcacaaat
      961 tgaagtcata ctcgaaaaat ctaactaacc tattaccttt tgaaaatgcg gataatttca
     1021 attatctaat taaccccttt ttataattaa acattccaac agtactcaaa ggagaaattc
     1081 gaatgaacaa taacatcacg aaaaaaatta ttttatcaac aacattgtta ctattaggta
     1141 cagcatcaac acaatttcct aatacaccta tcagttcttc aactgaagcg aaagcttatt
     1201 atataaatca aaatgaaact aacgttaatg agttaactaa atattactcg cagcaacatt
     1261 taaccttctc taacaaaacg ttatggcaaa aagataacgg tacgattcat gcaacgttgt
     1321 tacagttttc ttggtatagt catattcaag tttatggacc tgaaagttgg ggcaatatca
     1381 accaattaag aaataaaagc gttgatattt ttggtataaa agaccaagaa accattgatt
     1441 cttttgcatt atctcaagaa acgtttactg gtggtgttac tcctgcagca acatctaacg
     1501 ataaacacta taaactgaat gtaacatata aagataaagc agaaacgttt actggcggat
     1561 ttccagttta tgaaggtaat aagcctgttt taactttaaa agaattagat tttcgtattc
     1621 gtcaaac
//
LOCUS       DALMNS010000186         1597 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.188, whole genome shotgun sequence.
ACCESSION   DALMNS010000186 DALMNS010000000
VERSION     DALMNS010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1597)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.188"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(406..501)
                     /locus_tag="O6Y56_002595"
     CDS             complement(406..501)
                     /locus_tag="O6Y56_002595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575824.1"
                     /translation="MLTNRLTSVNYVKKRLIQNIQRILSKEVLYG"
     gene            596..>1597
                     /gene="sbi"
                     /locus_tag="O6Y56_002596"
     CDS             596..>1597
                     /gene="sbi"
                     /locus_tag="O6Y56_002596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunoglobulin-binding protein Sbi"
                     /protein_id="HDB5575825.1"
                     /translation="MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQ
                     NNYVTDQQKAFYQVLHLKGITEEQRNQYIKTLREHPERAQEVFSESLKDSKNPDRRVA
                     QQNAFYNVLKNDNLTEQEKNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKA
                     IKDFQDNKAPHDKSAAYEANSKLPKDLRDKNNRFVEKVSIEKAIVRHDERVKSANDAI
                     SKLNEKDSIENRRLAQREVNKAPMDVKEHLQKQLDALVAQKDAEKKVAPKVEAPQIQS
                     PQIEKPKAESPKVEVPQIQSPKVEVPQSKLLGYYQSLKDSFNYGYKYLTDTYKSYKEK
                     "
BASE COUNT          627 a          288 c          230 g          452 t
ORIGIN      
        1 atttattcat tcgcaacccc taaaaatatt ttttagcctt tctgcgaatt ttatgagcta
       61 gaaaggctta tgcattagta gcgaagctat ctaatgcgtt cctctatttt cttcaaattt
      121 atttgttaga aaggcttatg cagttgacgt tttacgtcct actacgttcc tttgtcttct
      181 tcaaatttat ttgttagaaa gatacccaac tcttcctact tgttaacttt cgcctcgaaa
      241 gtttctatgt tgggacccta tgcatgagtt gcgattctat ctaatgtcgt gacctaatta
      301 tatagaagaa aaagtgcatc agtgacaaat taaatgagct ttttactcta ccaaactctc
      361 ttcgaaagac aattttctcc tctatttatt agcaaactat tgcatttatc catatagtac
      421 ttccttactt aaaatacgct gaatgttctg aattaaacgc ttttttacat agttaacact
      481 agttaatcta ttagttaaca ttagttaata attagttaat ttccatttgt attctcatgt
      541 gataaattct aaaagcatac aataaattta atatgtaaaa agaaagggaa tacacatgaa
      601 aaataaatat atctcgaagt tgctagttgg ggcagcaaca attactttag ctacaatgat
      661 ttcaaatggg gaagcaaaag cgagtgaaaa cacgcaacaa acttcaacta agcaccaaac
      721 aactcaaaac aactacgtaa cagatcaaca aaaagctttt tatcaagtat tacatctaaa
      781 aggtatcaca gaagaacaac gtaaccaata catcaaaaca ttacgcgaac acccagaacg
      841 tgcacaagaa gtattctctg aatcacttaa agacagcaag aacccagacc gacgtgttgc
      901 acaacaaaac gctttttaca atgttcttaa aaatgataac ttaactgaac aagaaaaaaa
      961 taattacatt gcacaaatta aagaaaaccc tgatagaagc caacaagttt gggtagaatc
     1021 agtacaatct tctaaagcta aagaacgtca aaatattgaa aatgcggata aagcaattaa
     1081 agatttccaa gataacaaag caccacacga taaatcagca gcatatgaag ctaactcaaa
     1141 attacctaaa gatttacgcg ataaaaataa ccgctttgta gaaaaagttt caattgaaaa
     1201 agcaatcgtt cgtcatgatg agcgtgtgaa atcagcaaat gatgcaatct caaaattaaa
     1261 tgaaaaagat tcaattgaaa acagacgttt agcacaacgt gaagttaata aagcacctat
     1321 ggatgtaaaa gagcatttac agaaacaatt agacgcatta gtagctcaaa aagatgctga
     1381 aaagaaagtg gcgccaaaag ttgaggctcc tcaaattcaa tcaccacaaa ttgaaaagcc
     1441 taaagcagaa tcaccaaaag ttgaagtccc tcaaattcaa tcaccaaaag ttgaggttcc
     1501 tcaatctaaa ttactaggtt actaccaatc attaaaagat tcatttaact atggttacaa
     1561 gtatttaaca gatacttata aaagctataa agaaaaa
//
LOCUS       DALMNS010000187         1570 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.189, whole genome shotgun sequence.
ACCESSION   DALMNS010000187 DALMNS010000000
VERSION     DALMNS010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.189"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(172..1527)
                     /gene="brnQ"
                     /locus_tag="O6Y56_002597"
     CDS             complement(172..1527)
                     /gene="brnQ"
                     /locus_tag="O6Y56_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HDB5575826.1"
                     /translation="MKKKLTFKENMFIGSMLFGLFFGAGNLIFPIHLGQAAGSNVFIA
                     NLGFLITAIGLPFLGIIAIGISKTSGLFEIASRVNKTYAYIFTIALYLVIGPFFALPR
                     LATTSFEIAFSPFLSPKQITLYLFIFSFVFFVIAWFFARKPSRILEYIGKFLNPVFLV
                     LLAIILLFAFIHPLGGISDAPISKQYQSNALFNGFLDGYNTLDALASLAFGIIIVATI
                     KKLGIENPTDIAKETIKSGTISIIMMGIIYTLLAIMGTLSIGHFKLSENGGIALAQIT
                     QYYLGNYGIVLLSLIVMVACLKTAIGLITAFSETFEHLFPKMNYLAIATVVSFISFLF
                     ANVGLTKIIMYSVPVLMFLYPLAIALIVLTLFSSKFHHSKIIYQCTIFFTMIAALVDG
                     LKASPEFISSTSFSQTLINFSQKYLPLSDIGMGWVVLSLIGFIIGFIIYKIKHRKIPQ
                     A"
BASE COUNT          589 a          229 c          266 g          486 t
ORIGIN      
        1 tgtaaattta ataatataaa gataaagttg tgtatgtatt aatgtgattc gtaaaatgaa
       61 agtactaata tttttcatgg ataatcattg atatgtatac gagtgcagtt taatgtagta
      121 tgaataaaaa atgccacaag catatgttta acatatgact gtggcatagt attatgcttg
      181 tggaatttta cgatgcttaa ttttataaat aatgaagccg ataatgaaac caatcaaact
      241 gagaacaacc cagcccatac caatatctga taatggtaaa tatttttggc tgaaattaat
      301 caaagtttgt gagaatgatg tgcttgaaat gaactctgga ctagctttta atccatctac
      361 taatgcagca atcattgtaa agaaaatggt acattgataa ataatttttg aatgatggaa
      421 tttgctacta aataatgtta gtacaatcaa ggcaattgct aatggatata agaacattaa
      481 cactgggact gagtacataa taattttagt taagccaaca ttcgcgaata agaatgagat
      541 aaagctcaca actgttgcaa tcgctaggta attcatttta gggaaaaggt gttcaaatgt
      601 ttctgaaaat gccgtaatta aaccgatagc tgtttttaaa caagcaacca taactatgag
      661 tgataacaag acgataccgt agttacctaa gtagtattgc gtaatttgcg ctaaggcaat
      721 accaccattt tcactaagtt tgaaatgacc aatacttaat gtacccatga ttgctagtag
      781 ggtataaatg atccccatca taatgatact gatagtacca gacttaattg tttctttagc
      841 gatatcagtt ggattttcga tacctaactt tttaatcgtt gcaacaatga tgataccaaa
      901 tgccaatgac gctagcgcat ctaaggtatt gtatccatct aaaaagccgt taaataaggc
      961 gtttgattga tattgtttac taataggtgc atcagatatg ccacctaatg gatggataaa
     1021 agcaaataat aaaataattg ctaataatac taagaatacc ggatttaaaa atttaccgat
     1081 atattctaaa attcttgatg gctttctcgc aaaaaaccat gcaatcacaa agaagacgaa
     1141 gctaaaaata aataaatata aagtgatttg ctttggtgat aaaaatggcg aaaatgcaat
     1201 ttcaaatgat gtagttgcca gtctaggtaa ggcgaaaaat ggtccgataa ctagatatag
     1261 ggcaatcgtg aaaatataag catatgtttt attaacacgc gatgcaattt caaataaacc
     1321 agatgtcttt gaaatgccaa tagcaatgat acctagaaat ggtaagccaa ttgctgtaat
     1381 taaaaatcct aagttagcga taaaaacgtt agaaccagca gcttgaccca agtgtattgg
     1441 gaagataaga ttgccggcac caaagaataa accaaataac atagaaccta taaacatgtt
     1501 ttctttaaat gttagtttct tcttcatata tgtatttgtt ctccttttta gaacttataa
     1561 aaatctactt
//
LOCUS       DALMNS010000188         1504 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.190, whole genome shotgun sequence.
ACCESSION   DALMNS010000188 DALMNS010000000
VERSION     DALMNS010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.190"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            70..870
                     /gene="seb"
                     /locus_tag="O6Y56_002598"
     CDS             70..870
                     /gene="seb"
                     /locus_tag="O6Y56_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000278085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal enterotoxin type B"
                     /protein_id="HDB5575827.1"
                     /translation="MYKRLFISHVILIFALILVISTPNVLAESQPDPKPDELHKSSKF
                     TGLMENMKVLYDDNHVSAINVKSIDQFLYFDLIYSIKDTKLGNYDNVRVEFKNKDLAD
                     KYKDKYVDVFGANYYYQCYFSKKTNDINSHQTDKRKTCMYGGVTEHNGNQLDKYRSIT
                     VRVFEDGKNLLSFDVQTNKKKVTAQELDYLTRHYLVKNKKLYEFNNSPYETGYIKFIE
                     NENSFWYDMMPAPGDKFDQSKYLMMYNDNKMVDSKDVKIEVYLTTKKK"
     gene            complement(948..>1504)
                     /locus_tag="O6Y56_002599"
     CDS             complement(948..>1504)
                     /locus_tag="O6Y56_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015978304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4888 domain-containing protein"
                     /protein_id="HDB5575828.1"
                     /translation="NKKLLTRTLIASALVLTTVGSGFHSSSNYNGINNVAKASEITDR
                     DLWKNVRDALKEANIIDKTANETVGVTYNLNNGGESSITGTADLDELSNFNNKPINTD
                     SVKRIDLSRINPNGNRFDANDAWKKLTDKLKEKQIVKNGDTVTIHSKDKNDPPISAKV
                     GENYNGNKGLMLNQRDITKITITK"
BASE COUNT          521 a          207 c          228 g          548 t
ORIGIN      
        1 taagattata acatatattt aaagtgtatc tagatacttt ttgggaatgt tggataaagg
       61 agataaaaaa tgtataagag attatttatt tcacatgtaa ttttgatatt cgcactgata
      121 ttagttattt ctacacccaa cgttttagca gagagtcaac cagatcctaa accagatgag
      181 ttgcacaaat cgagtaaatt cactggtttg atggaaaata tgaaagtttt gtatgatgat
      241 aatcatgtat cagcaataaa cgttaaatct atagatcaat ttctatactt tgacttaata
      301 tattctatta aggacactaa gttagggaat tatgataatg ttcgagtcga atttaaaaac
      361 aaagatttag ctgataaata caaagataaa tacgtagatg tgtttggagc taattattat
      421 tatcaatgtt atttttctaa aaaaacgaat gatattaatt cgcatcaaac tgacaaacga
      481 aaaacttgta tgtatggtgg tgtaactgag cataatggaa accaattaga taaatataga
      541 agtattactg ttcgggtatt tgaagatggt aaaaatttat tatcttttga cgtacaaact
      601 aataagaaaa aggtgactgc tcaagaatta gattacctaa ctcgtcacta tttggtgaaa
      661 aataaaaaac tctatgaatt taacaactcg ccttatgaaa cgggatatat taaatttata
      721 gaaaatgaga atagcttttg gtatgacatg atgcctgcac caggagataa atttgaccaa
      781 tctaaatatt taatgatgta caatgacaat aaaatggttg attctaaaga tgtgaagatt
      841 gaagtttatc ttacgacaaa gaaaaagtga aattatattt tagaaaagta aatatgaaga
      901 gttagtaatt aaggcaggca cttatagagt acctgccttt tctaatatta tttagttata
      961 gttatttttg ttatatctct ctgatttagc attaacccct tgttgccatt atagttttca
     1021 ccaactttag ctgaaattgg gggatcattt ttatctttac tatggatagt tactgtgtcg
     1081 ccgtttttaa cgatttgttt ctcttttaat ttgtcagtta attttttcca tgcatcattt
     1141 gcgtcaaacc tatttccatt tggatttatt cttgacaaat caattctttt aacactatcg
     1201 gtattaatcg gcttgttatt aaaattacta agttcatcta aatcagctgt acccgtaata
     1261 ctactttcgc caccattatt taaattgtac gtaacaccaa ctgtctcatt tgctgtttta
     1321 tcgataatat ttgcttcttt caaagcatct cttacatttt tccataagtc tctatctgtt
     1381 atttcagaag cctttgcaac gttattaata ccattataat ttgaagaaga atgaaaacct
     1441 gaacctactg ttgttaaaac taaagcactt gctatcaatg ttcttgttaa tagtttttta
     1501 ttca
//
LOCUS       DALMNS010000189         1473 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.191, whole genome shotgun sequence.
ACCESSION   DALMNS010000189 DALMNS010000000
VERSION     DALMNS010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.191"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            108..1385
                     /locus_tag="O6Y56_002600"
     CDS             108..1385
                     /locus_tag="O6Y56_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HDB5575829.1"
                     /translation="MALFKRKISLPMQVVIALVLGVVVGLLLYGQENVANYIKPFGDV
                     FLNLIKMIVIPVVFCSLALSISNVGESKTVGRYGWKTILYFEIITTIAIGLGIIFGNL
                     FKPGAGLDPTKLPKGDISKYQSTAHAAEQSTYGNHFIDTIVHIIPTNFFEALNKGELL
                     PIIFFAVFFGLGLAAVGKKAEPVKEFLSGSLEAVFWMINKILKLAPIGVFAFICTTII
                     TFGASALLPLLKLVLVVVFAMVFFVFAILGLVAWMCGINIMNIIRILKSELLLAFSTS
                     SSEAVLPVMMKKMENFGSPKEITSFVIPIGYTFNLDGSALYQSIAALFVAQMYGMHLT
                     LSEQIVLMLTLMITSKGMAAVPGTSIVVLLTTLGAMGLPAQGLALIIGVDRILDMVRT
                     CVNVIGNALSTIVIAKWENVYDKAKGQEYLKSI"
BASE COUNT          472 a          214 c          275 g          512 t
ORIGIN      
        1 attagtgatt tttgacatct ataaaagata aatattttaa ttttttatag ataattatca
       61 attttctgat ataattgagt gatgtcagat gaaggggagt ttgtactatg gctctattca
      121 agagaaaaat tagcctacct atgcaagttg ttattgcatt agtgttaggt gttgtcgtag
      181 gacttttatt atatggacaa gaaaacgtag caaattacat taaaccattt ggtgacgtat
      241 ttttaaattt aattaaaatg atcgttatac cagttgtatt ttgctcacta gcgctttcta
      301 tttcgaacgt tggggaatcg aaaactgtag ggcgttatgg ctggaaaaca attttatact
      361 ttgaaattat tacaacaatc gcaataggtt tagggattat cttcggtaac ctatttaaac
      421 caggtgctgg attagaccca acaaaattac ctaaaggtga tatttctaaa tatcaatcaa
      481 ctgcacatgc agcagaacaa tctacatatg gaaatcattt tattgatacc attgtacata
      541 ttattccgac aaactttttt gaagctttaa ataagggtga attattacct attatcttct
      601 tcgcagtatt ctttggatta ggattagctg cagtaggtaa aaaagcagaa ccagttaaag
      661 aatttttaag cggatcgctt gaagctgtgt tctggatgat taataaaatt ttaaaattag
      721 caccaattgg agtgtttgca ttcatttgta ctacaattat tacgtttggt gcatccgcat
      781 tattaccact attaaaatta gtattagttg ttgtctttgc aatggtgttc tttgtattcg
      841 caatactagg actagttgca tggatgtgtg gtattaatat catgaatatt attagaatct
      901 tgaaaagtga attgctttta gcattttcta catcaagttc ggaagctgta cttcctgtca
      961 tgatgaagaa aatggaaaac ttcggttctc caaaagaaat tacttctttt gttataccaa
     1021 ttggttatac gtttaactta gacggatcag cactttatca atctattgca gcattattcg
     1081 ttgcgcagat gtatggaatg cacttaacat tatcagagca aattgtattg atgttaacat
     1141 taatgattac gtctaaaggt atggcggcag taccaggaac ttcgatcgtt gttttattaa
     1201 caacattagg tgctatgggc ttaccggcac aaggtttagc attaattatt ggtgttgacc
     1261 gtatcttaga tatggtacgt acatgtgtaa acgttattgg taacgcatta tcaacaatcg
     1321 ttatagctaa atgggaaaac gtatacgata aagcaaaagg tcaagaatat ttaaaatcaa
     1381 tttaaaaaat actatctgac atttaaagcc ccttacaacc tctggttgtt aggggctttt
     1441 atgcatgcgc aaagcgcagg cgaactgaga gcg
//
LOCUS       DALMNS010000190         1404 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.194, whole genome shotgun sequence.
ACCESSION   DALMNS010000190 DALMNS010000000
VERSION     DALMNS010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1404
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.194"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..326)
                     /locus_tag="O6Y56_002601"
     CDS             complement(<1..326)
                     /locus_tag="O6Y56_002601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDB5575830.1"
                     /translation="MLCESRVINQNPKYRIIKYNNEYFMVDLVSTWIAYFLPMINWFI
                     PKKYAKISRKEFESLNIVKPAKNNTFWPVAGFAVLLTTLTRKYIYLLNIHLEKEIVIL
                     TCCMILL"
     gene            complement(401..1021)
                     /locus_tag="O6Y56_002602"
     CDS             complement(401..1021)
                     /locus_tag="O6Y56_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000882158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDB5575831.1"
                     /translation="MLCESWNINKNPRYKIIKYKNEYLMIDVTSSWIFFFIPMLNWGV
                     PKKFAKISQSEFEELNTFTPKNSSSAGWIAGGGSVLLAVLTRKYIQLLNIQINQIAVN
                     ILCCLVLLGVFLSALYINSKSKLNVYDRNNCDEKIILIPTFKNLCLMLLSYIIFGGIS
                     ILAFYMFITEGIQNIILFITWIMLVIMFLLSNVALVVNKKVYVIKR"
     gene            complement(1196..>1404)
                     /locus_tag="O6Y56_002603"
     CDS             complement(1196..>1404)
                     /locus_tag="O6Y56_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001813289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDB5575832.1"
                     /translation="PTFKHFCFVIFSYLFSGFFSIMSLCMLITLDSQNIIVFIAWIIM
                     TMLFFLVNMASIGNKNVHVILKKH"
BASE COUNT          516 a          217 c          161 g          510 t
ORIGIN      
        1 agaagtatca tacagcatgt taatataact atttcttttt ctaaatggat attaagcaaa
       61 taaatatatt ttcttgttaa ggttgttaat aacactgcaa atcctgcaac aggccagaaa
      121 gtattatttt tagcgggttt gacaatattt aaactttcaa attcttttct actaattttc
      181 gcgtactttt tgggaataaa ccaattaatc atgggcaaaa aataagcaat ccaagtactt
      241 actaaatcaa ccatgaaata ttcattattg tatttaataa ttctatattt agggttttga
      301 ttaatgactc tagattcgca aagcactgtt tatcacttcc tacttttact tagtaatctt
      361 tatttgaaga acggttaaca taatattgtt agtcattttt ctaccttttt ataacatata
      421 cttttttatt gactaccaaa gctacattac taagtaagaa cattattaca agcataatcc
      481 aagtaataaa taaaatgatg ttttgaatac cttctgtgat aaacatataa aaagcaagta
      541 tgcttatacc accaaaaata atatacgaaa gaagcattaa gcataaattt ttaaaagttg
      601 gtattaaaat tatcttttca tcacagttat ttctatcata aacgtttaac ttagatttcg
      661 aattaatata taaagctgaa aggaaaaccc ccaaaagtac gagacagcat aaaatattca
      721 cagcaatttg attaatttgt atatttaaca actgtatata ttttctcgtc aatactgcca
      781 ataaaactga tcccccacct gctatccatc cagctgagct actatttttc ggtgtaaatg
      841 tatttaattc ttcaaactca ctttgactaa tcttagcaaa tttcttaggt acaccccaat
      901 taagcattgg aatgaaaaag aaaatccaag aactagttac atcaatcatt aaatactcgt
      961 tcttatattt tataatttta tatctcgggt tcttatttat attccaggac tcacataaca
     1021 tttttatctc gcccacttca taccttttta agttcaaaca attaatcagc taatctcatg
     1081 aatttagaat attgaatata ttgctaagtt aaaatattat tgtttgatat cctttataat
     1141 atgcggattt ttatagtttc tgttataact cagttgactt tgaatttagc gtttgctaat
     1201 gctttttaag tatgacatga acatttttat tacctatcga agccatattc actagaaaga
     1261 aaagcattgt cattataatc caagcaataa atactattat gttctgtgaa tctaaagtta
     1321 ttaacatgca tagactcatt attgaaaaaa atcccgaaaa taaataagaa aatattacaa
     1381 aacaaaaatg tttgaaagta ggta
//
LOCUS       DALMNS010000191         1400 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.195, whole genome shotgun sequence.
ACCESSION   DALMNS010000191 DALMNS010000000
VERSION     DALMNS010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.195"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            10..792
                     /locus_tag="O6Y56_002604"
     CDS             10..792
                     /locus_tag="O6Y56_002604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
                     /protein_id="HDB5575833.1"
                     /translation="MGYLKRIGLYISILILIVIVAGCGKSDETKEDSKEEQIKKSFAK
                     TLDMYPIKNLEDLYDKEGYRDGEFKKGDKGMWTIYTDFAKSNKPGELDDEGMVLFLNR
                     NTKKATGYYYTSKVHDEFNEKEHQKKYHVELKNNKIVLLDNVEDEKLKQKIENFKFLS
                     QYADFKDLKNYQDGSITTNENVPSYEAEFKLNNSDENVKKLRKVYPITTKKSPVLKLH
                     IDGDIKGSSIGYKNIEFNFSKVKDEETAVRDFVNFGPSDGVS"
     gene            840..1400
                     /locus_tag="O6Y56_002605"
                     /pseudo
     CDS             840..1400
                     /locus_tag="O6Y56_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431761.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tandem-type lipoprotein"
BASE COUNT          602 a          130 c          278 g          390 t
ORIGIN      
        1 cgtgaaacga tgggatattt aaaaaggatt ggattgtaca taagtatctt gattttaata
       61 gttattgtag caggttgtgg taaaagtgat gaaacaaaag aagattccaa agaagaacaa
      121 attaaaaaga gctttgcgaa aacgttagat atgtatccaa tcaaaaatct tgaggattta
      181 tacgacaaag aaggatatcg agatggcgaa tttaaaaagg gagataaagg gatgtggacg
      241 atatacacag atttcgctaa aagtaataaa ccgggtgaat tggatgatga aggtatggtt
      301 ttatttctta atagaaatac aaagaaggca acaggatatt attacacgag caaagttcat
      361 gatgaattta atgaaaaaga gcatcaaaaa aaatatcatg ttgaacttaa aaataataaa
      421 atagttcttt tggataatgt agaagacgaa aaacttaaac aaaaaattga aaattttaaa
      481 tttcttagtc agtatgcgga ttttaaagat ttaaaaaatt atcaagatgg aagtataaca
      541 actaatgaaa atgtaccgag ctatgaagca gaatttaaat tgaataatag tgatgaaaat
      601 gtaaaaaaac ttagaaaagt ttatccaatt acaacaaaaa aatctccagt attgaaatta
      661 catatagatg gtgacataaa aggaagttca attggataca aaaatataga atttaatttt
      721 tcaaaagtaa aagacgaaga aacagctgta agagattttg tgaattttgg accatctgat
      781 ggagttagct aaagataatt agatgtagaa ataattctaa aacagagaga cgtgaaacga
      841 tgggatattt aaaaaggatt ggaatgtgta taagcctgtt gattgtaatc atttttgtaa
      901 catcttgcgg tggtggtaat aaaatcactg gagattcaaa agaagcacaa attaaaaaga
      961 gttttgctaa aacgttagat atgtatccaa ttaagaatct cgaggattta tatgataaag
     1021 aaggatatag agatggtgag tttaaaaaag gcgataaagg gacgtgggtt gttagatctg
     1081 aaatgataat tcaaccaaaa ggtgaaagtt taacttcaag aggcatgata ttatacatga
     1141 atagaaatac taggaccaca actggttatt tttcaataga agagatagat tcaagaaaaa
     1201 gtcttgatga aagagaaaca gaaaaaagta tcctgtgaaa atgaaaaaca ataagattat
     1261 tccaaatgag gagataaaag atgaaaagtt gaaaaaggaa attgaaaact ttaagttttt
     1321 tgtgcaatat ggcagtttta aaggaataga gaattatgaa aacggtgaca tttcctacga
     1381 ttctgaagct cctatttatt
//
LOCUS       DALMNS010000192         1397 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.196, whole genome shotgun sequence.
ACCESSION   DALMNS010000192 DALMNS010000000
VERSION     DALMNS010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1397
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.196"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(55..>1397)
                     /locus_tag="O6Y56_002606"
     rRNA            complement(55..>1397)
                     /locus_tag="O6Y56_002606"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          309 a          403 c          308 g          377 t
ORIGIN      
        1 atatgtcacg ttattccgca tcttctgaag aagatgttcc gaatatatcc ttagaaagga
       61 ggtgatccag ccgcaccttc cgatacggct accttgttac gacttcaccc caatcatttg
      121 tcccaccttc gacggctagc tcctaaaagg ttactccacc ggcttcgggt gttacaaact
      181 ctcgtggtgt gacgggcggt gtgtacaaga cccgggaacg tattcaccgt agcatgctga
      241 tctacgatta ctagcgattc cagcttcatg tagtcgagtt gcagactaca atccgaactg
      301 agaacaactt tatgggattt gcttgacctc gcggtttcgc tgccctttgt attgtccatt
      361 gtagcacgtg tgtagcccaa atcataaggg gcatgatgat ttgacgtcat ccccaccttc
      421 ctccggtttg tcaccggcag tcaacttaga gtgcccaact taatgatggc aactaagctt
      481 aagggttgcg ctcgttgcgg gacttaaccc aacatctcac gacacgagct gacgacaacc
      541 atgcaccacc tgtcactttg tcccccgaag gggaaggctc tatctctaga gttgtcaaag
      601 gatgtcaaga tttggtaagg ttcttcgcgt tgcttcgaat taaaccacat gctccaccgc
      661 ttgtgcgggt ccccgtcaat tcctttgagt ttcaaccttg cggtcgtact ccccaggcgg
      721 agtgcttaat gcgttagctg cagcactaag gggcggaaac cccctaacac ttagcactca
      781 tcgtttacgg cgtggactac cagggtatct aatcctgttt gatccccacg ctttcgcaca
      841 tcagcgtcag ttacagacca gaaagtcgcc ttcgccactg gtgttcctcc atatctctgc
      901 gcatttcacc gctacacatg gaattccact ttcctcttct gcactcaagt tttccagttt
      961 ccaatgaccc tccacggttg agccgtgggc tttcacatca gacttaaaaa accgcctacg
     1021 cgcgctttac gcccaataat tccggataac gcttgccacc tacgtattac cgcggctgct
     1081 ggcacgtagt tagccgtggc tttctgatta ggtaccgtca agatgtgcac agttacttac
     1141 acatatgttc ttccctaata acagagtttt acgatccgaa gaccttcatc actcacgcgg
     1201 cgttgctccg tcaggctttc gcccattgcg gaagattccc tactgctgcc tcccgtagga
     1261 gtctggaccg tgtctcagtt ccagtgtggc cgatcaccct ctcaggtcgg ctatgcatcg
     1321 ttgccttggt aagccgttac cttaccaact agctaatgca gcgcggatcc atctataagt
     1381 gacagcaaga ccgtctt
//
LOCUS       DALMNS010000193         1384 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.197, whole genome shotgun sequence.
ACCESSION   DALMNS010000193 DALMNS010000000
VERSION     DALMNS010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1384
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.197"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            222..557
                     /locus_tag="O6Y56_002607"
                     /pseudo
     CDS             222..557
                     /locus_tag="O6Y56_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500032.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
     gene            complement(652..1101)
                     /locus_tag="O6Y56_002608"
     CDS             complement(652..1101)
                     /locus_tag="O6Y56_002608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis-inhibiting protein CHIPS"
                     /protein_id="HDB5575834.1"
                     /translation="MKKKLATTVLALSFLTAGISTHHHSAKAFTFEPFPTNEEIESNK
                     KMLEKEKAYKESFKNSGLPTTLGKLDERLRNYLKKGTKNSAQFEKMVILTENKGYYTV
                     YLNTTLAEDRKNVELLGKMYKTYFFKKGESKSSYVINGPGKTNEYAY"
BASE COUNT          465 a          197 c          207 g          515 t
ORIGIN      
        1 agtttacggg gtgcttttta tgttataatt aactgtatat agtaggagtg aactatatag
       61 cctgttaagt ggcctagtaa cctaacactt atcctgcaat tgatatcctt tttgcccttc
      121 actcgataca tatatctcaa caacatagaa atattacagt cgctacaccg catcttaaat
      181 ggtgtggtta tttttattgg aagtgtgtat caggtatcag taatgttaaa acaccagcta
      241 aaaatgaaaa gaattcacca gtgccagcag gttatacact cgataaaaac aatgtaccgt
      301 ataaaaaaga gactggttat tacacagttg ccaatgttaa aggtaataac gtgagggatg
      361 gctattcaac taattcaaga attacaggtg tattacccaa taacgcaact atcaaatatg
      421 acggcgcata ttgcattaat ggctatagat ggattactta tattgctaat agtggacaac
      481 gtcgttatat agcgacagga gaggtagaca aggcaggtaa tagaataagc agttttggta
      541 agtttagtgc agtttgataa ttagatatat aagggtttgg caagttatga aatgtctgcc
      601 aaacctttat ataaaaaaga aatatctacc ttttaattta tgtaactact attagtatgc
      661 atattcatta gtttttccag gaccattaat tacataagat gatttagact ctcctttttt
      721 aaagaagtat gttttataca ttttacctag taactcaaca ttttttctat cttcagcaag
      781 tgttgtattc agatatactg tatagtaacc tttattttca gttaaaataa ccattttttc
      841 aaattgagca gaattttttg tgcctttctt taaataattt ctcaaacgtt catctaattt
      901 tcctagcgtt gtaggaagac cactattttt aaatgattct ttataagctt tttctttctc
      961 taacattttc ttatttgatt ctatttcttc atttgtagga aacggttcaa aagtaaaagc
     1021 tttcgctgaa tgatggtgtg tactgattcc tgccgttaaa aaacttaatg ctaaaactgt
     1081 tgttgctaat ttctttttca taatgatgtt aattctcctt aaattctata tttaaattta
     1141 tagttagttt tgcgaaattc ctaaaatgag tttaatctaa tcgacgaaat atattaatta
     1201 acttgaaatt aataaaagat taattatttt taactaaaaa ttaaaattca attagtgttt
     1261 tgatgaattt ggtctcgata aattgaaata atctaaaaaa cgctataatt tttctattaa
     1321 tagtaattaa tatgtgctat atttatctta gacacagcaa tgtgttcaaa ttttcatcta
     1381 ttca
//
LOCUS       DALMNS010000194         1372 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.198, whole genome shotgun sequence.
ACCESSION   DALMNS010000194 DALMNS010000000
VERSION     DALMNS010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.198"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            128..778
                     /locus_tag="O6Y56_002609"
     CDS             128..778
                     /locus_tag="O6Y56_002609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001813290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDB5575835.1"
                     /translation="MEVKTLLCESRVIDKNAKYRIIKYNDEYFMIDLSSNYISYLLPM
                     INWFIPKKGVKLSVKEVEKLDTIKPQKNSALNWYIGFSVLLTVIFRKYISLLDLQIER
                     YINISISLLIILFIILFRLYINKKLTIKSFHQNEYRTLVLIPTWKSFIFTSFAFVFIG
                     LISIFTIIVTFYYENQNIIVFLTEVAMILIFSFLNVLSISDSKVHVIIKENGKRNI"
     gene            1040..>1372
                     /locus_tag="O6Y56_002610"
     CDS             1040..>1372
                     /locus_tag="O6Y56_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDB5575836.1"
                     /translation="MLCDVEVVNKNSKYRIIKYNDEYLMIDLVSTWLTLFLPMMNWLI
                     PKKYVKISKKEFDDLNIVKPTKNRAFWSAVGGSVLFGVTFRKYTHLLDVQLEKSLVIT
                     ICFITFLSI"
BASE COUNT          538 a          149 c          202 g          483 t
ORIGIN      
        1 taaatgaaag tactaaattc agattaaaaa tatgaaaata tcaattaata aaacctttga
       61 tgacagtagc ttgatagtat ttgaatgtct tctgaactat gggaaaaagt attgcacata
      121 aaatcaaatg gaagtgaaga cattgctttg cgaatctaga gttatagata aaaatgcaaa
      181 atatagaatt ataaaataca atgatgaata tttcatgata gatttatcga gtaattacat
      241 atcttatcta ttgccaatga tcaattggtt tatacccaaa aaaggagtta agttaagtgt
      301 taaagaggta gaaaaactag atactataaa gcctcaaaaa aattcagctt taaattggta
      361 tataggattc tctgtattat tgactgtaat ttttagaaag tatattagtt tattagattt
      421 acaaattgaa aggtatataa acattagtat aagtcttttg ataattcttt ttatcatttt
      481 gtttagattg tatataaata aaaagttaac aattaagagt tttcatcaaa atgagtacag
      541 gactttagtg ctaatcccga catggaaaag ctttatattt acgtcgtttg cttttgtctt
      601 tataggatta atatcgatat ttacaatcat tgtcaccttt tattatgaaa atcaaaacat
      661 catagtattt ttaactgaag ttgctatgat tctaatattc tcttttttaa atgttttatc
      721 aatttctgac tcgaaagtcc atgtcataat aaaagaaaat ggcaaaagaa atatataaac
      781 aaacctttac ttattcattt agaaggtatc aaaaaccgtt aacaatcaaa acaacaacat
      841 ctattaatgt agaagggtgg ttgtttttaa ggataaaaag ggcataattt ataatctgag
      901 ttaaagtact aaattcatat tataaatatg ccaataacaa tgaataaaat ttttaatggc
      961 agtaaattag taatatttaa aagtcttctg aagtatagaa aaaatgtatt acacataaaa
     1021 tcaaatggaa gtgaagacat tgctttgcga cgttgaagtg gttaataaaa actcaaaata
     1081 tagaattatt aaatataatg atgaatattt gatgatcgat ttagtaagta cctggttaac
     1141 tttatttctt ccgatgatga attggttaat ccctaaaaaa tacgtgaaga ttagtaaaaa
     1201 agaatttgac gatttaaaca ttgttaaacc tactaaaaat agagcttttt ggtcagctgt
     1261 aggtggctca gttttatttg gagttacgtt cagaaagtat actcatttgc tcgatgtcca
     1321 actagaaaaa agtttagtta ttaccatatg ttttataaca ttcttaagta tt
//
LOCUS       DALMNS010000195         1347 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.199, whole genome shotgun sequence.
ACCESSION   DALMNS010000195 DALMNS010000000
VERSION     DALMNS010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.199"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            142..348
                     /locus_tag="O6Y56_002611"
     CDS             142..348
                     /locus_tag="O6Y56_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575837.1"
                     /translation="MNEIETIISEIEKLLTNNTPYSISKNSGVPRQTVTDLKVGNTKI
                     KDAKFKTIIKLYEYQKSSENNSEC"
     gene            1044..1154
                     /locus_tag="O6Y56_002612"
     CDS             1044..1154
                     /locus_tag="O6Y56_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575838.1"
                     /translation="MKMTIKVRKTNKKEKIEFLIGTFIIILVILGFKIMK"
BASE COUNT          545 a          129 c          199 g          474 t
ORIGIN      
        1 tataataaaa aaagccaata ctattaggta ttagtttttg aattaactag tttggcaact
       61 acaaagaaac aatgtattgc taaacgtagt tactgcatta ggattattat aattataaat
      121 agaaagagag cgtgattaaa aatgaatgag attgaaacta ttataagtga aatagaaaag
      181 ttattaacta acaatacacc atatagtatt tcaaaaaact caggtgtacc acgtcaaaca
      241 gttactgatt taaaggtagg taatactaaa ataaaggatg ccaaatttaa aacaataatc
      301 aagttatacg agtatcaaaa gtcgtcagaa aataattcag agtgctaata aatatacctt
      361 gtttgattag gtggacaaga aattaaattt ctaatgattt catggttgtc tgtccacgct
      421 ttgtccacct caataaaatt atctctaggt ttttaaaatt gtacatgttt aaacaatcaa
      481 aagtatgcat tattatatta tcatttccat aaaaatttaa atgatcttta agtgatgata
      541 taaaaggctg aacatagtaa ataagttaac tttaatgcag catactatac atattttata
      601 ataatgttta tgcacataat tttttattga caatttttta tattaaattg tgtaattggc
      661 atatatgatg atttgtgata attatattgt aatatagcat ttggttttat gattctaaaa
      721 ttaatagatt tgaaaagtat actttatttc atgaaagttt ttggtacatt tatttgaaaa
      781 tgtttttatt acaaagttac atggctaaat gtttcttaac aaaattaatt catcgagtgt
      841 aaagaatcgt gtggtaaaca taatttatat agattataag gaggtgaaaa tggtcgagga
      901 agtaaaaacg ataaaatagt ttgaatgttt tgatttcaat tctgatagga ctattgaatt
      961 tgcaaactaa taagaatgtg aggtttgatt taattcgaag tcatattctt tgaataaaat
     1021 attactttct taccattagt aaaatgaaga tgactattaa agtgcgaaaa acaaataaaa
     1081 aagagaaaat agaattttta atagggacgt ttataattat tctagtaata ttaggcttca
     1141 aaattatgaa ataaatgtat agtatttgag aagtctatat gactccggaa aaattaaagt
     1201 ctaaagatat ttcaatatct caaatttaat agactactgg aattagtagt ttgaatattg
     1261 aaagactcta atctaataaa aatacataaa aggttaaact ttagaagtgg ttgtaaactt
     1321 caatgaatac taaacattga agtttag
//
LOCUS       DALMNS010000196         1308 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.200, whole genome shotgun sequence.
ACCESSION   DALMNS010000196 DALMNS010000000
VERSION     DALMNS010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.200"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            646..>1308
                     /locus_tag="O6Y56_002613"
     CDS             646..>1308
                     /locus_tag="O6Y56_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000559653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575839.1"
                     /translation="MIACISLGISIFALGISIYTVFYQRKKDNNLLRPQLFLESQNKQ
                     TVDYIGINLDIGGYEKLQEYDVLLTFINTTQVRIIDLSVSIDVRKNDTFDYLLSKALE
                     EKENNFDIEKDMFGNDTYGWDKVFGLEETTKEKISVLDGGDSFELRLPSIFSALLLGA
                     MYLNRNDFTESNFTIDFDVKILYNHDFANKGKYVCVNKTVSVNITYERAIQGPWVVYD
                     SII"
BASE COUNT          472 a          142 c          208 g          486 t
ORIGIN      
        1 gctgtatgta gtgtctcaaa actgtgacaa ccgcaatata ttgtgtcaca aaagcgtgac
       61 actacagctt tttatgatat cactttaaaa ttacttaaaa cccttagaat gtctggcttt
      121 gccagaccta tcatttttga atgatagcaa attctcctta tgctcttaca gagttcttag
      181 agataaatta aaaattctcg atttttgata aaaaacgctc tgcaggaatt tagaaaaaca
      241 cgggaaagtt ttaaaggatt ttatgctaat ttttaatttg catgtaaatg gacagtgtta
      301 caaaatagtc attgtttttg ctgaaatttt tgtttgtgaa attagcatat atgtatttgg
      361 ctcatatttt cgttttaaaa gcgtatataa gttttggata gaaaaaatat atgatttacc
      421 cctaaacctt taaaatgccc cttaaaattc aaaataaggg catttaacat tgtaataagg
      481 attgctattt tttataaaag gagagatatc atgaagatta aaactttcga tacttttact
      541 catcgtcaat aaagcaattg gaataaattt ttaataattt gactgcttat tcttctaaaa
      601 aaattgatat gattatttaa actaatttaa aggaggatta ttgatttgat tgcttgtatt
      661 tctttaggaa tatctatttt tgctttaggt atttcaatat atactgtgtt ttatcagaga
      721 aaaaaagata ataatctttt aagacctcaa ctttttttag aatctcaaaa taagcaaact
      781 gtagattaca taggtattaa tttagatatt ggaggttacg aaaagctaca ggaatatgat
      841 gttttattaa catttattaa tacaacgcaa gtaagaatta tagatttgtc tgtatctatt
      901 gatgtgagga aaaatgatac ttttgattat ttattaagta aagcattaga agaaaaagaa
      961 aacaattttg atatagaaaa agatatgttt ggtaatgata cttatggttg ggataaagtt
     1021 tttggtttgg aagaaacgac aaaagaaaaa atatcagttc ttgatggcgg agattcattc
     1081 gaattgagat taccaagtat tttttcagct ttattattag gtgccatgta tttaaataga
     1141 aatgacttta cagaatctaa ctttacaata gattttgatg taaaaatttt atataatcat
     1201 gattttgcta ataaaggtaa atatgtttgt gtaaataaga ctgtttcagt aaatatcact
     1261 tatgaaagag cgattcaagg accatgggtt gtttatgatt ctattatt
//
LOCUS       DALMNS010000197         1273 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.201, whole genome shotgun sequence.
ACCESSION   DALMNS010000197 DALMNS010000000
VERSION     DALMNS010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1273
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.201"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            66..251
                     /locus_tag="O6Y56_002614"
     CDS             66..251
                     /locus_tag="O6Y56_002614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575840.1"
                     /translation="MSEYKKKIIELIESNLTGYEISKKTGVSQYVLSQLRQGKREVDN
                     LTLNTTEKLYEYANKVL"
     gene            763..867
                     /locus_tag="O6Y56_002615"
     CDS             763..867
                     /locus_tag="O6Y56_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575841.1"
                     /translation="MFKVNYSILSYYPEYNIAVSWQRLREGKIIKNKI"
     gene            994..1245
                     /locus_tag="O6Y56_002616"
     CDS             994..1245
                     /locus_tag="O6Y56_002616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575842.1"
                     /translation="MLTLIKLKEDEQVIIYEYIPEDDISNGKGSVTFNKKDAEVIDFS
                     LSEIENEEYFMLYRNKSFSVVRDFIEKQEFPENYKIAWY"
BASE COUNT          522 a          137 c          204 g          410 t
ORIGIN      
        1 tacgttaagt tcacagaatt tcgaaaaaaa gcagtaaaca ttgtacagat atggagatga
       61 aaaaaatgtc agaatacaag aaaaagataa ttgaattaat tgaaagtaat ttaacaggat
      121 atgaaatttc taaaaaaact ggagtttctc aatacgtact ttcacaatta agacagggca
      181 aacgcgaagt agataatcta accctgaata caacagaaaa attatatgaa tatgccaata
      241 aagttttgta atataactac tgtataaatt aatcaagcta tgtttatttg atttaactat
      301 taataaaaat catatggtga atggatatta taataattaa aatacaaaaa tagtagattc
      361 caatttgtga aaaaggagta tgttgtttca tttagaattt attgcacgaa attagcatcg
      421 aataagggaa aataagtgtt aagttttaaa tgataaaaaa gattggaatg gatcgtcttg
      481 aaatgctccc ttcaaagttt tcattttttc aatgtctact tcgaaggggg catttccatt
      541 aaattgttat agctttttat atttgtataa tgaacatata agtttaagaa gatgcgagtg
      601 aaggaaataa aaaagctcaa atgtaccaaa ttgttaatct taataaatct ctactttata
      661 aagattgaat ggacattcga gcgttaatca gtcaggaggg aatttcactc ctacaattta
      721 ataataatac ttgcttcacc actgtacaag gagtgatttg ttatgttcaa agtgaattat
      781 tcgattttaa gttattatcc agaatataat atcgcagtaa gttggcaacg tttaagagaa
      841 ggaaaaataa taaaaaacaa gatttaatac tgctgcgtca tgaggcgctt gaacattatt
      901 tgatgaataa gtataattac aactatgatt atgcacataa aattgtatca aaaaatacga
      961 ttattcaatt tttataaaaa taaggtggat taaatgctta cattaataaa attgaaagaa
     1021 gatgaacagg ttataatata tgaatatata cctgaagatg atataagtaa cggtaaaggt
     1081 tcagtaactt ttaataaaaa agatgcagag gttatagatt tttcattatc tgaaatagaa
     1141 aatgaagaat attttatgtt atatcgtaat aagtcttttt ctgtagtaag agactttatc
     1201 gagaagcaag aatttcccga aaattataaa atagcttggt attaaagcat cctttctaca
     1261 cagataaaga gaa
//
LOCUS       DALMNS010000198         1266 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.202, whole genome shotgun sequence.
ACCESSION   DALMNS010000198 DALMNS010000000
VERSION     DALMNS010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.202"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            10..85
                     /locus_tag="O6Y56_002617"
     tRNA            10..85
                     /locus_tag="O6Y56_002617"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:43..45,aa:Val,seq:tac)
     gene            102..177
                     /locus_tag="O6Y56_002618"
     tRNA            102..177
                     /locus_tag="O6Y56_002618"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:135..137,aa:Thr,seq:tgt)
     gene            183..258
                     /locus_tag="O6Y56_002619"
     tRNA            183..258
                     /locus_tag="O6Y56_002619"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:216..218,aa:Lys,seq:ttt)
     gene            262..343
                     /locus_tag="O6Y56_002620"
     tRNA            262..343
                     /locus_tag="O6Y56_002620"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:296..298,aa:Leu,seq:tag)
     gene            347..421
                     /locus_tag="O6Y56_002621"
     tRNA            347..421
                     /locus_tag="O6Y56_002621"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:379..381,aa:Gly,seq:gcc)
     gene            432..520
                     /locus_tag="O6Y56_002622"
     tRNA            432..520
                     /locus_tag="O6Y56_002622"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:466..468,aa:Leu,seq:taa)
     gene            539..612
                     /locus_tag="O6Y56_002623"
     tRNA            539..612
                     /locus_tag="O6Y56_002623"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:573..575,aa:Arg,seq:acg)
     gene            622..695
                     /locus_tag="O6Y56_002624"
     tRNA            622..695
                     /locus_tag="O6Y56_002624"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:656..658,aa:Pro,seq:tgg)
     gene            713..788
                     /locus_tag="O6Y56_002625"
     tRNA            713..788
                     /locus_tag="O6Y56_002625"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:746..748,aa:Ala,seq:tgc)
     gene            810..883
                     /locus_tag="O6Y56_002626"
     tRNA            810..883
                     /locus_tag="O6Y56_002626"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:844..846,aa:Met,seq:cat)
     gene            912..985
                     /locus_tag="O6Y56_002627"
     tRNA            912..985
                     /locus_tag="O6Y56_002627"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:946..948,aa:Ile,seq:cat)
     gene            995..1084
                     /locus_tag="O6Y56_002628"
     tRNA            995..1084
                     /locus_tag="O6Y56_002628"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1031..1033,aa:Ser,seq:tga)
     gene            1095..1170
                     /locus_tag="O6Y56_002629"
     tRNA            1095..1170
                     /locus_tag="O6Y56_002629"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1128..1130,aa:Asp,seq:gtc)
BASE COUNT          289 a          299 c          343 g          335 t
ORIGIN      
        1 ttttaaatcg gagaattagc tcagctggga gagcatctgc cttacaagca gagggtcggc
       61 ggttcgaacc cgtcattctc caccatttat tcttacatat tgccggccta gctcaattgg
      121 tagagcaact gacttgtaat cagtaggttg ggggttcaag tcctctggcc ggcaccatgg
      181 aagagccatt agctcagttg gtagagcatc tgacttttaa tcagagggtc agaggttcga
      241 atcctctatg gctcaccatt tgcgggtgtg gcggaattgg cagacgcact agacttagga
      301 tctagcgcct tacggcgtgg gggttcgact cccttcaccc gcatatgcag aagtagttca
      361 gcggtagaat acaaccttgc caaggttggg gtcgcgggtt cgaatcccgt cttctgctcc
      421 atttttatag tgccggggtg gcggaactgg cagacgcaca ggacttaaaa tcctgcggtg
      481 agtgatcacc gtaccggttc gattccggtc ctcggcacca ttttcaataa aaacatatgc
      541 gcccgtagct caattggata gagcgtttga ctacggatca agaggttatg ggttcgactc
      601 ctatcgggcg cgttaattat acgggaagta gctcagcttg gtagagcact tggtttggga
      661 ccaaggggtc gcaggttcga atcctgtctt cccgatatac tgtaattatt atgggggctt
      721 agctcagctg ggagagcgcc tgctttgcac gcaggaggtc agcggttcga tcccgctagt
      781 ctccaccata ttatttacaa actatataag gcggtgtagc tcagctggct agagcgtacg
      841 gttcataccc gtgaggtcgg gggttcgatc ccctccaccg ccactattta ttagttgtaa
      901 aattatattt aggaccttta gctcagttgg ttagagctaa cggctcataa ccgttcggtc
      961 gcaggttcga gtcctgcaag gtccatataa ttttggagga atacccaagt ccggctgaag
     1021 ggatcggtct tgaaaaccga caggggctta acggctcgcg ggggttcgaa tccctcttcc
     1081 tccgttttac taatggtctc gtagtgtagc ggttaacacg cctgcctgtc acgcaggaga
     1141 tcgcgggttc gattcccgtc gagaccgcca tttaatttta taattaatag cgatttacct
     1201 ataataatgg aggaataccc aagtccggct gaagggatcg gtcttgaaaa ccgacagggc
     1261 cttaac
//
LOCUS       DALMNS010000199         1229 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.203, whole genome shotgun sequence.
ACCESSION   DALMNS010000199 DALMNS010000000
VERSION     DALMNS010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1229)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1229)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1229
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.203"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..>1229
                     /locus_tag="O6Y56_002630"
     rRNA            <1..>1229
                     /locus_tag="O6Y56_002630"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          369 a          235 c          348 g          277 t
ORIGIN      
        1 ggcgcacggt ggatgccttg gcactagaag ccgatgaagg acgttactaa cgacgatatg
       61 ctttggggag ctgtaagtaa gctttgatcc agagatttcc gaatggggaa acccagcatg
      121 agttatgtca tgttatcgat atgtgaatac atagcatatc agaaggcaca cccggagaac
      181 tgaaacatct tagtacccgg aggaagagaa agaaaattcg attcccttag tagcggcgag
      241 cgaaacggga agagcccaaa ccaacaagct tgcttgttgg ggttgtagga cactctatac
      301 ggagttacaa aggacgacat tagacgaatc atctggaaag atgaatcaaa gaaggtaata
      361 atcctgtagt cgaaaatgtt gtctctcttg agtggatcct gagtacgacg gagcacgtga
      421 aattccgtcg gaatctggga ggaccatctc ctaaggctaa atactctcta gtgaccgata
      481 gtgaaccagt accgtgaggg aaaggtgaaa agcaccccgg aaggggagtg aaatagaacc
      541 tgaaaccgtg tgcttacaag tagtcagagc ccgttaatgg gtgatggcgt gccttttgta
      601 gaatgaaccg gcgagttacg atttgatgca aggttaagca gtaaatgtgg agccgtagcg
      661 aaagcgagtc tgaatagggc gtttagtatt tggtcgtaga cccgaaacca ggtgatctac
      721 ccttggtcag gttgaagttc aggtaacact gaatggagga ccgaaccgac ttacgttgaa
      781 aagtgagcgg atgaactgag ggtagcggag aaattccaat cgaacctgga gatagctggt
      841 tctctccgaa atagctttag ggctagcctc aagtgatgat tattggaggt agagcactgt
      901 ttggacgagg ggcccctctc gggttaccga attcagacaa actccgaatg ccaattaatt
      961 taacttggga gtcagaacat gggtgataag gtccgtgttc gaaagggaaa cagcccagac
     1021 caccagctaa ggtcccaaaa tatatgttaa gtggaaaagg atgtggcgtt gcccagacaa
     1081 ctaggatgtt ggcttagaag cagccatcat ttaaagagtg cgtaatagct cactagtcga
     1141 gtgacactgc gccgaaaatg taccggggct aaacatatta ccgaagctgt ggattgtcct
     1201 ttggacaatg gtaggagagc gttctaagg
//
LOCUS       DALMNS010000200         1208 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.204, whole genome shotgun sequence.
ACCESSION   DALMNS010000200 DALMNS010000000
VERSION     DALMNS010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.204"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            26..1204
                     /gene="deoB"
                     /locus_tag="O6Y56_002631"
     CDS             26..1204
                     /gene="deoB"
                     /locus_tag="O6Y56_002631"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HDB5575843.1"
                     /translation="MTRPFNRVHLIVMDSVGIGEAPDAADFKDEGSHTLRHTLEGFDQ
                     TLPNLEKLGLGNIDKLPVVNAVEQPEAYYTKLSEASVGKDTMTGHWEIMGLNIMQPFK
                     VYPNGFPEELIQQIEEMTGRKVVANKPASGTQIIDEWGEHQMKTGDLIVYTSADPVLQ
                     IAAHEDIIPLEELYDICEKVRELTKDPKYLIGRIIARPYVGEPGNFTRTSNRHDYALK
                     PFGKTVLDHLKDGGYDVIAIGKINDIYDGEGVTEAVRTKSNMDGMDQLMKIVKKDFTG
                     ISFLNLVDFDALYGHRRDKPGYAQAIKDFDDRLPELFSNLKEDDLVIITADHGNDPTA
                     PGTDHTREYIPVIMYSPKFKGGHALESDTTFSSIGATIADNFNVTLPEFGKSYLKELK
                     "
BASE COUNT          421 a          190 c          254 g          343 t
ORIGIN      
        1 tatataaaat ttgggagtga tagctatgac aagaccattt aatcgtgtac atttaatcgt
       61 aatggattca gtaggtattg gtgaagcgcc agacgcagct gattttaaag atgaaggttc
      121 acatacttta agacatacct tagaaggctt cgatcaaact ttaccaaacc ttgaaaagtt
      181 aggtctaggg aacatcgata aattaccagt agtaaatgca gttgaacaac cagaagcata
      241 ctatactaaa ttgagtgaag cttcagttgg taaagataca atgactggtc actgggaaat
      301 tatgggatta aatattatgc aaccttttaa agtataccct aatggattcc ctgaagagtt
      361 aattcaacaa attgaagaaa tgacaggtcg taaagttgtt gctaacaaac cggcatcggg
      421 tacgcaaatt atcgatgagt ggggcgagca ccaaatgaaa actggtgact taattgttta
      481 tacaagtgca gacccagtat tgcaaattgc tgcacatgaa gacattatcc cattagaaga
      541 gttatatgat atttgtgaaa aggttcgtga gttgacaaaa gaccctaaat atttaattgg
      601 tcgtattatc gcacgtccat atgttggtga accaggaaac tttacacgta catctaatcg
      661 acatgactat gcgttaaaac cttttggtaa aactgtctta gatcatttga aagacggtgg
      721 ttatgatgtc attgccatcg gtaaaattaa tgacatttat gatggtgaag gtgtaacaga
      781 agcggttcgt acgaagagta acatggacgg tatggatcaa ttgatgaaaa ttgttaagaa
      841 agatttcaca ggtattagct tcttaaactt agtagacttt gatgcattat acggtcatcg
      901 tcgtgataaa ccgggttatg cacaagcaat taaagatttc gatgatcgct tgccagaact
      961 gtttagcaac ttaaaagaag acgatttagt aattattaca gcagaccatg gtaatgaccc
     1021 gacagcgcca ggtacggacc atacgagaga atatatccca gtaattatgt acagtccgaa
     1081 atttaaaggt ggtcatgcac tagaaagtga tactacattc agttctatcg gtgcaactat
     1141 agcagataat ttcaacgtaa cattaccaga gttcggtaaa agttatttaa aggaattgaa
     1201 atagaata
//
LOCUS       DALMNS010000201         1153 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.205, whole genome shotgun sequence.
ACCESSION   DALMNS010000201 DALMNS010000000
VERSION     DALMNS010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1153)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.205"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            181..897
                     /locus_tag="O6Y56_002632"
     CDS             181..897
                     /locus_tag="O6Y56_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superantigen-like protein SSL12"
                     /protein_id="HDB5575844.1"
                     /translation="MNKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQD
                     ETNINELIKYYTQPHFSFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQL
                     KDRYVDVFGLKDKDTDQLWWSYRETFTGGVTPAAKPSDKTYNLFVQYKDKLQTIIGAH
                     KIYQGNKPVLTLKEIDFRAREALIKNKILYNENRNKGKLKITGGGNNYTIDLSKRLHS
                     DLANVYVKNPNKITVDVLFD"
BASE COUNT          437 a          173 c          177 g          366 t
ORIGIN      
        1 aactgatgca aatagatatg ttaaaaaacc tcaaaatgca aaaattgaag ttatcctcga
       61 aaaatcaaac taacattaat aacggagtta ataaaaataa tcgcaaatgc tatattgact
      121 tcgctcacat ataaatttgt tattcctcgt ttcatgattc ctctgaaagg agatgttcta
      181 atgaataaga acatcacgaa aaatataatt ttaacgacaa cattattact attaggtaca
      241 gtattacctc aaaatcaaaa accagtattt agtttttact ctgaagctaa agcttatagc
      301 attggtcaag atgaaactaa catcaatgaa ttaattaaat attacacaca gcctcatttt
      361 tcattttcaa ataaatggct atatcaatat gataatggaa acatttatgt tgaacttaag
      421 agatattcat ggtcagcaca tatttcttta tggggcgctg aaagttgggg aaatattaat
      481 cagttaaaag atcgttacgt agatgtgttt ggactaaagg acaaagatac tgatcagtta
      541 tggtggtctt atagagagac atttacaggt ggtgttacac cagccgcaaa accttctgat
      601 aaaacttata atctttttgt gcaatacaaa gataaactac aaacgattat tggtgcacat
      661 aaaatatacc aaggcaataa accagtatta acattgaaag aaatcgattt ccgtgcacga
      721 gaagcgttaa taaaaaataa aatattatat aacgaaaatc gtaataaagg taagcttaag
      781 atcaccggtg gcggtaataa ctacactatt gatttaagca aaagattaca ttcagattta
      841 gcaaatgttt atgttaaaaa tcctaataaa ataactgttg acgtcctctt tgattagtat
      901 aagaaggtga cttatacttc atgcacttta attccaaatc agattattta aatgataatt
      961 ttcaaagtgt atgatctata taataggtga aattttctat atatttaaat agaattggga
     1021 gtaggaatgt gacaaaaatg atattttata aaatttattt cgttgtcact ccccaacttg
     1081 cacattattg taagctgact ttccgccagc ttctatgttg gggccccgcc aacttccatt
     1141 gcctgtagaa att
//
LOCUS       DALMNS010000202         1121 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.206, whole genome shotgun sequence.
ACCESSION   DALMNS010000202 DALMNS010000000
VERSION     DALMNS010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1121)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.206"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            64..>1121
                     /locus_tag="O6Y56_002633"
     CDS             64..>1121
                     /locus_tag="O6Y56_002633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001622764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3-like element IS1181 family transposase"
                     /protein_id="HDB5575845.1"
                     /translation="MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPS
                     ACYCCGVKNEGQIHKHGKRVSRITLLKTQGYNTYLNLAKQRFKCLECNGTFTAKTSIV
                     DESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANSLRIKPFNCLP
                     EHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTRFLRAYFERFDLKNRQQVK
                     TVTIDMYEPYVRLFRDLFPNAAIIFDRFHIVQHLNRELNKYRVQVMNEYRNKKGPNYT
                     IFKNNWKVLLMDTSKTIFSKYRWNKSFKAYKRSSDIVEFMLSKDDILRRSYELVQGLR
                     KDLRLCNWPKFINRLNSV"
BASE COUNT          417 a          171 c          185 g          348 t
ORIGIN      
        1 aaagcgcaat tgcctctata atttaaagtg accaaaccca aactaaagga gacaagtgcg
       61 cctatgtgta atgatacctt agaattacta agaataaaag atgaaaatat aaaatatata
      121 aaccaagaaa ttgacgtcat tatcaaagga aaaaaagcaa cagtggttaa tgctgtacta
      181 acgtataagc cttcggcctg ttattgttgt ggagttaaaa atgaaggaca aattcataaa
      241 catggtaagc gtgtttctcg tattacttta cttaaaactc aagggtataa cacatacctc
      301 aacttagcta aacaacgttt taaatgctta gaatgcaatg gcacttttac tgctaaaacg
      361 tcaattgttg atgagtcgtg ttttatctca agatgtgtta ctcaaaaagt tatagaagaa
      421 gctactaaag ttaaaacaga gattgatact gcagaagata actgtatctc tccatctact
      481 gtaagtcgta ttagaactaa agcggctaat tcattacgaa ttaaaccgtt taattgtttg
      541 ccagaacaca tcgctatgga tgaatttaaa agcgttaaaa atgtaactgg atcaatgagt
      601 ttcattttta tagataatga tactcatgat gttatagata ttttagaaaa tagaactaca
      661 agattcttgc gtgcctattt cgagcgattc gatttaaaaa atcgacaaca agttaagacg
      721 gttactattg acatgtatga accctatgtc cgattatttc gcgacctatt tcctaatgca
      781 gctattattt ttgacagatt ccatatcgtt caacatttaa atagggaact taataagtat
      841 cgtgtacaag ttatgaatga ataccgtaat aaaaaaggac ctaattatac aatttttaag
      901 aataactgga aagttctatt gatggatact agtaaaacca tatttagtaa atacagatgg
      961 aataaatctt ttaaggctta taaacgctca tctgacattg tagaattcat gctttcaaaa
     1021 gacgatatac tacgacgctc ctacgaactt gtccaaggat taagaaaaga tctaaggtta
     1081 tgtaattggc ctaaatttat taatcgttta aattcagtta g
//
LOCUS       DALMNS010000203         1083 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.207, whole genome shotgun sequence.
ACCESSION   DALMNS010000203 DALMNS010000000
VERSION     DALMNS010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.207"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            10..90
                     /locus_tag="O6Y56_002634"
                     /pseudo
     CDS             10..90
                     /locus_tag="O6Y56_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000614797.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter ATP-binding protein"
     gene            complement(212..400)
                     /locus_tag="O6Y56_002635"
     CDS             complement(212..400)
                     /locus_tag="O6Y56_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapA family protein"
                     /protein_id="HDB5575846.1"
                     /translation="MNISNENTVTLIAVIIAIIIGIFLQIFFKLPLIVTAVLSILLGI
                     FVGFIVYLIVSFYNKRNN"
     gene            539..1072
                     /locus_tag="O6Y56_002636"
     CDS             539..1072
                     /locus_tag="O6Y56_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDB5575847.1"
                     /translation="MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLN
                     GKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKT
                     LTNQDVYLEYDKEKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKYFSPNGKYRNVF
                     IEAQNKAKQQKLNIWSK"
BASE COUNT          429 a          126 c          193 g          335 t
ORIGIN      
        1 gtggttcatt tgattcaaat atctaatatt aataaatcat ttaagaaaaa gcgtgtttta
       61 aaaaacattt cagttggcat tgaaaaaggc tggatctaaa tacaaacaaa aaagtattga
      121 gtgttttgat ttaagagact ttgaaagtga gtccataatc aaaatcttac tcaatacttt
      181 tattttggta ctctcaagtt agatttgtta actaattgtt tcgtttatta taaaacgaaa
      241 caatcaggta aacgataaag cctacaaaga tacccaataa aatagatagt actgccgtca
      301 ctattaatgg taatttgaaa aatatttgta ggaaaatacc aatgataatt gcgataatta
      361 ctgcaattaa tgtgactgta ttttcatttg aaatgttcat tcattttcac tccttaacaa
      421 taacattata tcatgctata gctttccaaa atattgaaat atgtagatat ggctattgac
      481 gatgtttctt aacttttata tgattaatcg gaatgaaaaa agagaagtag gtggcaaaat
      541 gaagtcaaat aaatcgcttg ctatgattgt ggtagccatc attattgtag gtgtattagc
      601 atttcaattt atgaatcata cggggccttt taaaaaggga acaaatcatg aaactgtaca
      661 agatttaaat ggtaaagata aagtacatgt tcaaagagtt gtggatggtg atacatttat
      721 tgcaaatcaa aatggtaaag aaattaaagt taggcttata ggggttgata cgccagaaac
      781 ggtgaaaccg aatacgcctg tacaaccatt tggcaaagaa gcatcaaatt atagtaagaa
      841 gacattaaca aatcaagatg tttatttaga atatgataaa gaaaagcaag accgctatgg
      901 tagaacattg gcgtatgtat ggataagtaa agatcgtatg tacaataagg aattagtgga
      961 aaagggactt gctagagaga agtatttttc accaaatggc aaatatagaa atgtatttat
     1021 agaagcacaa aataaagcta aacaacagaa attaaatatt tggagtaaat aattaaatag
     1081 gtg
//
LOCUS       DALMNS010000204         1060 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.208, whole genome shotgun sequence.
ACCESSION   DALMNS010000204 DALMNS010000000
VERSION     DALMNS010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.208"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..365
                     /locus_tag="O6Y56_002637"
     CDS             <1..365
                     /locus_tag="O6Y56_002637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001813127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF536 domain-containing protein"
                     /protein_id="HDB5575848.1"
                     /translation="NQQILALESNKKIQKLENQLEEERQLNYSFDTATNDRQSINPQE
                     ATFTEEYQNSNQQQKKIQPIEAELNHKGITKAKKDDSANEDVLKRDDKLSEEIESGPE
                     DREVETPKKGFWSRLFGS"
     gene            469..1060
                     /locus_tag="O6Y56_002638"
                     /pseudo
     CDS             469..1060
                     /locus_tag="O6Y56_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001568503.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
BASE COUNT          448 a          128 c          189 g          295 t
ORIGIN      
        1 agaatcaaca aatattagct ttagaaagta ataaaaagat tcaaaaacta gaaaaccaat
       61 tagaagaaga aagacagctt aattactctt ttgatacagc gactaatgat agacaaagca
      121 ttaatccgca agaagcaact tttactgaag aatatcaaaa tagcaaccag caacaaaaga
      181 aaatacaacc aatagaagca gaattaaatc ataagggcat aactaaagcg aaaaaggatg
      241 acagtgcaaa cgaagacgta ttaaagagag atgataaact atctgaagaa atagagagtg
      301 gacctgagga cagggaagta gaaacaccta aaaaggggtt ttggagtcgt ttgtttggta
      361 gctaaaataa ttaattaggc actaaaagtt tataactttt agtgcctttt atatagtgag
      421 aacttctggt aatcaaagtt atgtccagtt tgtaattgga gacgttctat gaaaaatagt
      481 tatcaatccc aaaaagtgat tgaagaagtg tttaaagaaa agccgaattc tcgttggttg
      541 tttcttacat tatcaatacg aaatgcaata ggtggagata cgttagaaca aaatttaaca
      601 catttaactg agtcgtttag aagattattt aaatataaaa aaatcagtaa aaatttaatt
      661 ggctttatgc attcaactga agtaacagtt aataaaaatg acggtagtta taatcaacat
      721 atgcacgttt tgttgtgtgt tgaaaatgcg tattttagaa agaaaaaata tattacacaa
      781 acagaattgg ttgatttatg gcaacaagca ttaaaagtaa attatcgacc tgtcgtaaat
      841 attaaagcga tcaaaccaaa aaggagataa agatattgcg tctgctatca aggagacatc
      901 aaaatattcc gttaaatcat ctgacttttt aactgatagc gatgaaaaaa atcaagaaat
      961 tatcagtgat ctagaaaaag gtttgtatcg aaaacgtatg ttaagttatg gtagattgct
     1021 taaacaaaag cataaaattt taaatttaga taatgttgaa
//
LOCUS       DALMNS010000205         1042 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.209, whole genome shotgun sequence.
ACCESSION   DALMNS010000205 DALMNS010000000
VERSION     DALMNS010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1042)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.209"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..270
                     /locus_tag="O6Y56_002639"
     CDS             <1..270
                     /locus_tag="O6Y56_002639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01741 family protein"
                     /protein_id="HDB5575849.1"
                     /translation="LYYLFKNLRNLFKTEGHEPWTSCEFDFTSEGKLNVSFDYVDWIK
                     LSLGPLARENYYMYKKFGVIPEMEYEMEEIKEIVQYVKEQDEAEI"
     gene            281..769
                     /locus_tag="O6Y56_002640"
     CDS             281..769
                     /locus_tag="O6Y56_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin YezG family protein"
                     /protein_id="HDB5575850.1"
                     /translation="MTFEEKLSQMYNEIANEISGMIPVEWEKVYVIAYVDDEGGEVVF
                     NYTKPGSEELNYYSDIPKDCNVSKDLFKNSWFKVYRMFDELREVFKKEDLEPWTSCEF
                     DFTREGNLKVSFDYIDWIKLGFGPSGKENYYMYKKFGVLPEMEYEMEEIREVEKYVKE
                     QE"
BASE COUNT          412 a           98 c          206 g          326 t
ORIGIN      
        1 ctgtattact tgtttaagaa tttaaggaat ttatttaaaa cagaaggaca tgaaccatgg
       61 acatcatgcg aatttgactt tacaagcgaa ggtaaattaa acgtatcttt tgattatgtc
      121 gattggatta aattaagttt aggtccgtta gctagagaaa attactatat gtataaaaaa
      181 tttggggtta taccagaaat ggaatatgaa atggaagaaa ttaaagaaat cgtgcaatat
      241 gttaaagagc aagatgaagc tgaaatatag gggcgataat atgactttcg aagaaaaact
      301 aagtcaaatg tacaatgaaa ttgcaaatga gatcagtggg atgataccag tagagtggga
      361 aaaggtatat gtaattgcct atgtagatga tgaaggtgga gaggtcgttt ttaattatac
      421 taaaccagga agtgaagaat tgaattatta ttcagatatt cctaaagatt gcaatgtctc
      481 aaaagattta tttaagaatt catggtttaa agtttatcga atgtttgatg agttaagaga
      541 agtttttaaa aaagaagatt tagaaccgtg gacatcatgt gaatttgact ttacaagaga
      601 gggaaatttg aaagtatcat ttgattatat agattggatt aaattaggtt ttggtccatc
      661 tggaaaagaa aactactata tgtataaaaa gtttggtgtt ttaccagaaa tggaatatga
      721 aatggaagaa attcgagaag tagagaagta tgttaaagag caagagtagc agacatgtta
      781 tagaaggctg tgcaaaacca acctcgtttt acatttgact caaagaagaa ggtaaacgat
      841 aagattattt gcaacttaaa aagtctatta gcttatcggt atccatacat catatgtata
      901 aatgagttta actaattaac aaatcacgat ataaatttaa aattgtcatt aattgaaaag
      961 gttattgtag tgtattttat aaagttgatg cacatcgact tattttttaa aacttatatc
     1021 aaaaaaatat gagaaaagta ta
//
LOCUS       DALMNS010000206         1028 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.210, whole genome shotgun sequence.
ACCESSION   DALMNS010000206 DALMNS010000000
VERSION     DALMNS010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1028)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.210"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            10..456
                     /gene="perR"
                     /locus_tag="O6Y56_002641"
     CDS             10..456
                     /gene="perR"
                     /locus_tag="O6Y56_002641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HDB5575851.1"
                     /translation="MSVEIESIEHELEESIASLRQAGVRITPQRQAILRYLISSHTHP
                     TADEIYQALSPDFPNISVATIYNNLRVFKDIGIVKELTYGDSSSRFDFNTHNHYHIIC
                     EQCGKIVDFQYPQLNEIERLAQHMTDFDVTHHRMEIYGVCKECQDK"
BASE COUNT          401 a          132 c          145 g          350 t
ORIGIN      
        1 gtgatataga tgagtgttga aatagaatca attgaacatg aactagaaga atcaattgca
       61 tcattgcgac aagcaggcgt aagaattaca cctcaaagac aagcaatatt acgttattta
      121 atttcttcac atactcatcc aacagctgat gaaatttatc aagcactttc acctgatttt
      181 ccaaatataa gtgttgcgac aatatataat aacttaagag tgtttaaaga tattggaatt
      241 gtaaaagaat taacatatgg agactcatca agtcgattcg actttaatac acataatcat
      301 tatcatatta tatgtgaaca atgtggtaag atcgttgatt ttcaatatcc acagttaaat
      361 gaaattgaaa gattagctca gcatatgact gactttgacg taacacatca tcgaatggaa
      421 atttatggag tttgtaaaga atgccaagat aaataattta actttggtag tatgacaaat
      481 taaaaaatcg ttagcttact tcatataagt aagcgtaata tttaagaagt taaacgacat
      541 gaaagttgtt taacttcttt tttatgctca ttctttttta tgctcattct tttttatgct
      601 cattcttttt tatgctcatt cttttttatg cttattctga aaaatattta aatagaagaa
      661 aagaacattc taactacgga agtggtagta actaataact agtatccttt ataaataaac
      721 ataaaaatat tcaaacgaag gtttactaaa taactatcca taaagtgagg ataagtttgt
      781 ttgtaaaact gaagtaaaaa gcgtaaggaa ttacacttta aatacatata gtacttacga
      841 atagaaaata atcccttcaa cagtaatttt taaacaaaaa taagtgttgt tttatgttga
      901 ctctactaga ataacttgat attatataaa agtcgtcaaa cggcactaat atttaaaaaa
      961 caaatgtttt aagttgttga tttaaaatat taataaagtg taaatttgac tattgaaatt
     1021 cgaacaaa
//
LOCUS       DALMNS010000207          991 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.211, whole genome shotgun sequence.
ACCESSION   DALMNS010000207 DALMNS010000000
VERSION     DALMNS010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 991)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 991)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.211"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            175..867
                     /locus_tag="O6Y56_002642"
     CDS             175..867
                     /locus_tag="O6Y56_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HDB5575852.1"
                     /translation="MNYSPKQGVRSHGLPHDPFKSSTVPRPIGWISTVSKDGKDNLAP
                     YSQYQNLTWDPPMVMFAANQSVLGDHERKDTVKNAEETGWFVWNMATYDLREAVNLSS
                     KALPPEEDEFEYAGVTKEACIEAPGYRVKESPVHFECEYVQTIRIPTGDPVSTVDIVI
                     GRVAQVHIDDKVILDNGKLDIKSIKPIARLGYYDYTVVNEIFEMKAPSASKEELAGLE
                     GRNFDNQSDNKK"
BASE COUNT          352 a          143 c          197 g          299 t
ORIGIN      
        1 attaattatt aattgcataa atccttatct gaaattttcg aatcaagaac gcaaattata
       61 agcaaccacg tcatatatag tttctactta taaataaatt gattatttat attagacgct
      121 tatgtcatga gagcgtaacc ttaaatgtaa ttactaataa ggggtgagga tagaatgaat
      181 tattcgccga agcaaggtgt aaggagtcat ggcttaccac acgatccatt taaaagtagt
      241 acagtaccac gtccaatagg gtggatctct actgtatcga aagatgggaa agataattta
      301 gcaccttata gtcagtatca aaacttaact tgggatccac ctatggttat gttcgcagca
      361 aatcaatctg ttcttggtga tcatgagcgt aaagatacag taaaaaatgc agaagagaca
      421 ggatggtttg tatggaacat ggccacgtat gatttaagag aagctgttaa tttatcgtcg
      481 aaggcactac cacctgaaga ggatgaattt gaatatgcag gtgtgacgaa agaagcatgt
      541 atagaagcac caggttatcg agtcaaagaa tcgccagtac attttgaatg tgagtacgtt
      601 caaactattc gtattccgac aggagaccct gtatcaacag ttgatattgt tataggaaga
      661 gttgctcagg ttcatattga cgataaggtc attcttgata acggtaaatt agacattaag
      721 tcgattaaac ctattgctag gttaggatat tatgattaca cggttgtgaa tgaaatattt
      781 gaaatgaaag caccatcagc ttctaaagaa gagcttgcag gtttagaagg aaggaatttt
      841 gataatcaat cagataacaa aaaataatga attcaatcat tttcaataca tcgaaactac
      901 acgttgaaat tagtttcgat gtatttttat atttcaaaac cgggaagcga tatgtcgcta
      961 tatttataat tttaaagaag aattttttag a
//
LOCUS       DALMNS010000208          941 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.212, whole genome shotgun sequence.
ACCESSION   DALMNS010000208 DALMNS010000000
VERSION     DALMNS010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 941)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 941)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.212"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(407..898)
                     /gene="sak"
                     /locus_tag="O6Y56_002643"
     CDS             complement(407..898)
                     /gene="sak"
                     /locus_tag="O6Y56_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylokinase"
                     /protein_id="HDB5575853.1"
                     /translation="MLKRGLLFLTVLLLLFSFSSITNEVSASSSFDKGKYKKGDDASY
                     FEPTGPYLMVNVTGVDGKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKE
                     FRVVELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVVPDLSEHIKNPGFNLITKVII
                     EKK"
BASE COUNT          316 a          172 c          136 g          317 t
ORIGIN      
        1 atatatacta cgagggagta gtatgaaaac tatgctctct atcataagaa aaaacaccca
       61 gtgacatgct tgggtgaaca aggatagatg taaatagttg atgcatgtgt aacacatcat
      121 aacaaaaaac tagcccgaaa gctagctata acatacaatc taaaaagacg tcccttgaat
      181 acgtctagaa agattataac ataaaaaaat aggcaagtac cgaagtacct gcctaaaaaa
      241 ggattatcca ctttttcatc ctaactgatt tctccccata agtcacctaa tatctgatta
      301 ggtggggaag aaccattcgt gcatgaatga gaatttgatg aaagataatt ttcactacac
      361 atattcaatc aagacattgc tttctataat aaacaactat tttgttttat ttcttttcta
      421 taataacctt tgtaattaag ttgaatccag ggtttttaat atgctctgat aaatctggga
      481 caacaaaacc tttttctgtt atagggaaag acttcgtttc ttcttttttc ttattcttat
      541 cataataagt gacttcgatc tttgcgcttg gatctaattc aactactcta aactctttat
      601 atgctgtcgc atctaatgcc cattcgacat agtattcaat tttttctttt gtaagtgtag
      661 tcccaggttt aataggaaac tcgacataat gaggggatag caattcattt cctttaccat
      721 caactccagt cacatttacc atcaaatacg ggcctgttgg ttcaaaataa ctcgcgtcat
      781 cgcctttttt atattttcct ttgtcgaatg aacttgatgc acttacctca ttagtaattg
      841 aagaaaatga gaataataac aataaaacag ttaaaaataa taaacctctt ttgagcatgg
      901 cgcttcctcc aaatataata tatttgtttt tatttatctc t
//
LOCUS       DALMNS010000209          935 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.213, whole genome shotgun sequence.
ACCESSION   DALMNS010000209 DALMNS010000000
VERSION     DALMNS010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.213"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            118..870
                     /locus_tag="O6Y56_002644"
     CDS             118..870
                     /locus_tag="O6Y56_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000503564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exotoxin"
                     /protein_id="HDB5575854.1"
                     /translation="MGEFEVKYLTGFILILLLEGILTNSASAIAYSDLHHKSKFNSKR
                     LSNAKMSFANPTDLENKKTNDRLLTHDLLFHDMFLNDAWKKDFKVEFENEALSNEFIN
                     KNIDIYTGSYSYECHGGATNKTQCSYGGVTLSDNNKYDDYKNIPCNLWIDGHQTEKEL
                     TAVKTKKKIVTIQELDVQLRNYLNEKYKLYEKGGDIVKGYVKYHNDDEKNVEYDFYNL
                     NGEYGHEVLKMYADNKTINSDKLHLDIYLFKS"
BASE COUNT          362 a          102 c          157 g          314 t
ORIGIN      
        1 gcattttcgt tcagtcaact actgccaata taacttcgta gagcatagaa cattgattta
       61 tttcctagcc tgtttatcat ttatgtctcg ctctcaaatg taaattaata attgattttg
      121 ggggagtttg aagttaaata tttaacagga tttattttaa tattattgtt agaaggaatt
      181 ttgacaaatt cagcaagtgc aatcgcatat tcagacttac atcataaaag taagtttaat
      241 tcaaagcgtc taagtaatgc taagatgtca tttgctaatc caactgatct tgaaaataaa
      301 aaaacaaacg atagactgtt gactcatgat ttgttatttc atgacatgtt cttaaatgat
      361 gcttggaaaa aggattttaa agttgaattc gaaaatgagg cactttcaaa tgaatttata
      421 aataaaaata tcgatatata tactggaagc tatagctatg aatgtcatgg gggagcaacc
      481 aataaaacgc aatgtagtta tggtggtgtt actttaagtg acaataataa gtacgatgat
      541 tataagaata taccttgtaa tttatggatt gacggacatc aaacagaaaa agaactaact
      601 gcagtaaaaa cgaaaaagaa aattgttacc attcaagaat tagatgttca attaagaaat
      661 tatttgaatg agaagtataa gttgtacgaa aaaggtggcg acattgttaa agggtatgtt
      721 aaatatcata atgatgatga aaaaaatgta gaatatgatt tttataattt aaatggtgag
      781 tatggtcatg aggtattaaa aatgtatgct gataataaaa ctatcaatag tgacaaattg
      841 catttagata tctatttatt caaatcataa tttaaataag ttaatcatta ataatctttg
      901 acagtgaaat ataaagtacc tgtcattata ttgtt
//
LOCUS       DALMNS010000210          917 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.214, whole genome shotgun sequence.
ACCESSION   DALMNS010000210 DALMNS010000000
VERSION     DALMNS010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 917)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 917)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.214"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(159..908)
                     /locus_tag="O6Y56_002645"
     CDS             complement(159..908)
                     /locus_tag="O6Y56_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575855.1"
                     /translation="MSNTNKHYIEEEYATEQSRFFKRDIGFIFLYIFLVNILPIIIVF
                     LTFGLVAVFTQQAPWGFSFPISMNISYLLAVIISLAIFRRMHEDAFVPMIRSQIVASA
                     KYKWHILISFTLSIVLFLLLNHFDIFALNVDSFTVFDIYPLIREYGSISLIAIFSLTI
                     ILNTLICQLIFRHILIQELSRLIPLKITIVLSVILETLYYYPYINTWWEFIPALILAS
                     SATYLYLKSNRNFMVSYFYQLAVILVLHIFM"
BASE COUNT          352 a          119 c          162 g          284 t
ORIGIN      
        1 agagcattga acattgattt atgtctcaag ctctctatat ggctcgtttt tagaacgaca
       61 gtatatctaa ataaagcacg cttaaaagtg agttgtgata ctgactttta agtgtgcttt
      121 ttgatgtgta tggataatgg ataatattct gaaaaatttt acatgaaaat atgcaaaacg
      181 agtataactg ctaattgata gaaatagctc accataaaat tacggtttga ttttaaatat
      241 aagtaagtcg cactactagc tagtatcaat gctggaatga attcccacca tgtattaatg
      301 tatggataat agtacagtgt ttcaaggata acggataata ctattgtaat ctttaaaggt
      361 attaatctgc ttaattcttg aattaaaata tgacggaaaa taagttgaca aatcaaagta
      421 tttaatataa tggttaacga aaatatagct attaaactga tggaaccata ttctctaatg
      481 agcgggtaaa tgtcaaagac agtaaaggaa tctacattta gtgcgaaaat atcgaaatga
      541 tttaaaagta aaaagagtac gatacttaat gtaaatgata taagaatatg ccatttatat
      601 ttagcactgg caacgatttg cgaacgtatc attggaacaa atgcatcttc atgcatccga
      661 cgaaaaatag ctagtgaaat aataactgcg agtaaatagc tgatgttcat tgaaatagga
      721 aaagagaaac cccatggggc ttgttgagtg aatacagcta ctaacccaaa agttaaaaaa
      781 acgataatga ttggcaagat gttaaccaaa aatatataaa ggaaaataaa tccaatatca
      841 cgtttgaaaa aacgcgattg ttcggtagcg tattcttctt ctatgtaatg tttatttgta
      901 tttgacatag tatacct
//
LOCUS       DALMNS010000211          913 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.215, whole genome shotgun sequence.
ACCESSION   DALMNS010000211 DALMNS010000000
VERSION     DALMNS010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 913)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 913)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.215"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            29..628
                     /locus_tag="O6Y56_002646"
     CDS             29..628
                     /locus_tag="O6Y56_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HDB5575856.1"
                     /translation="MAFKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVE
                     GTELEHQSLAYMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDDI
                     KAQWGTLDEFKNEFANKATTLFGSGWTWLVVNDGKLEIVTTPNQDNPLTEGKTPILLF
                     DVWEHAYYLKYQNKRPDYMTAFWNIVNWKKVDELYQAAK"
BASE COUNT          347 a          134 c          167 g          265 t
ORIGIN      
        1 gtatattcat aaaaggagga atatacttat ggcatttaaa ttaccaaatt taccatatgc
       61 atatgatgca ttggaaccat atatagatca aagaacaatg gagtttcatc acgacaaaca
      121 tcacaatacg tacgtgacga aattaaacgc aacagttgaa ggaacagagt tagagcatca
      181 atcactagcg tatatgattg ctaacttaga caaggtaccg gaagcgatga ggatgtcagt
      241 tcgtaataat ggcggtggtc attttaacca ttcattattc tgggaaatac tatcacctaa
      301 ttctgaagaa aaaggtggcg taatagacga cattaaagcg cagtggggca ctttagatga
      361 atttaaaaat gaatttgcaa ataaagcaac aacattattt ggatcaggtt ggacttggtt
      421 agttgttaat gatggaaaat tagaaattgt gacaacgcca aaccaagata atccattaac
      481 agaaggcaaa acaccaatct tactatttga tgtttgggag catgcctact atctgaaata
      541 tcaaaataaa cgtccagact atatgactgc attttggaat attgttaact ggaaaaaagt
      601 tgatgaatta taccaagcag caaaataata taacttaatg taattgaggt ggagcatcta
      661 caaggtgttt cacctttttt gtacttaata tctttactta ttcgtttttg tgtaatggga
      721 tagcacgtaa aagtagcaaa ataaaacagt acaatcatat acaatgatga atactttact
      781 tgtgttctct gtgcttgtga actaaatgtt tcgagaagag cgcacatcga ataacaaaat
      841 tatttagaca acgttcaaca aataaataaa cataatacga ttaataatag aaaaatcgtg
      901 tgattatatg agc
//
LOCUS       DALMNS010000212          899 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.216, whole genome shotgun sequence.
ACCESSION   DALMNS010000212 DALMNS010000000
VERSION     DALMNS010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.216"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            206..370
                     /locus_tag="O6Y56_002647"
     CDS             206..370
                     /locus_tag="O6Y56_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001791373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575857.1"
                     /translation="MMFKKLLKAIKQNFLYEQSNITFKIILFGYKRLSKMIFQFEINH
                     INFLKRRVIS"
     gene            370..891
                     /locus_tag="O6Y56_002648"
     CDS             370..891
                     /locus_tag="O6Y56_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575858.1"
                     /translation="MINIISAIGSIGTFIMALFYFVSVSVQLYQMKISFLPALGFNQI
                     LLEREGDQLNIMNSATEEHHHKDYIKLYNLGGGAAKKIAIEVLLGNDKVIQKKYVNIL
                     PSKEGYMLPINKNVYEELERTIENNGYEADLNVRMTYYHNVSRKQQEVILKGQIDRFN
                     TYNNKEIYDLQFI"
BASE COUNT          349 a           83 c          150 g          317 t
ORIGIN      
        1 tatcgaaaga tttaaatgta aaattttgat ttgttaagaa attacgttta taaaaataaa
       61 aaaatcaact tatttgtatg agatgaatat gtattgaaga agatgtgtta ttaatttgga
      121 aaatactggt caaagatggg agatcttaaa agcgttattg tattctttag tcaatgcaaa
      181 tagattgcca taataataag cgtatttgat gtttaaaaag ttacttaagg ctataaagca
      241 aaacttttta tatgagcagt cgaatataac gtttaaaatc attctttttg gatataaacg
      301 attaagtaaa atgatttttc agtttgaaat taatcatata aatttcctta agagaagggt
      361 gatatcttaa tgattaatat tatttcagct ataggatcta ttggaacatt tataatggct
      421 ttattttatt ttgtatcagt ttcagttcaa ctttatcaaa tgaaaattag ctttctgcca
      481 gctttaggtt ttaatcaaat tttattagaa agggagggtg atcaacttaa tataatgaat
      541 tcggcaacag aagagcatca tcataaagat tatattaaac tatataattt aggtggcggt
      601 gctgctaaaa aaattgcaat agaggtttta ttgggtaatg ataaagtcat tcagaaaaaa
      661 tacgtgaata ttttacctag taaagaaggg tacatgttac caattaataa aaatgtgtac
      721 gaagaattag aaagaacgat tgagaacaat ggttatgaag ctgatttgaa tgtacgtatg
      781 acttattatc ataatgtaag tcgcaaacaa caggaagtta tattaaaagg tcaaatcgat
      841 cgttttaata cttataataa taaagaaatt tatgatttgc agtttatcta aaaattgat
//
LOCUS       DALMNS010000213          863 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.217, whole genome shotgun sequence.
ACCESSION   DALMNS010000213 DALMNS010000000
VERSION     DALMNS010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 863)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 863)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.217"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..347
                     /locus_tag="O6Y56_002649"
     CDS             <1..347
                     /locus_tag="O6Y56_002649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1433 domain-containing protein"
                     /protein_id="HDB5575859.1"
                     /translation="VKYDEKEKQKAIYYKEQQERITLYLKHNTKEPNTIKSVHFTKLE
                     TSPMGSAVIEGYINENKKADFVAYGSLEHHYQFGGSLIKSKNLSTLLKPAHQTKTPDE
                     IKKELESKKNDR"
BASE COUNT          333 a          126 c          125 g          279 t
ORIGIN      
        1 aagtgaaata tgacgaaaaa gaaaagcaaa aagcaattta ttataaagaa caacaagagc
       61 gtattacact ttatctcaag cataacacta aagaaccgaa tacgatcaaa tctgtacact
      121 tcacaaagtt ggaaacaagt cctatgggaa gtgcagtgat tgaaggatac atcaatgaaa
      181 acaaaaaagc tgattttgtt gcatatgggt cactagaaca tcattatcaa tttggtggaa
      241 gtttgatcaa aagtaaaaat ttaagcacgt tattaaaacc agcacatcaa accaaaacac
      301 ctgatgagat aaaaaaggaa ttagagtcta aaaagaacga ccgctaaaac tatgcggtcg
      361 ttttaatttt gctttcaagt taatcatact tacacataaa aatgaaaagt tgaattttta
      421 gtacaatttt cactgtattt atctgttaac cacttcataa ccgcaatatt ccgatgatct
      481 tagatgaact ttatatcaac acttttaatt gcttaatgtt tatcaaatat tgtatttgaa
      541 tcttcgacag aataaaactc gaagtctaac aagtgattcg aatttgtctc tgcaaatatt
      601 aaatacaatt aattggtttt gagtctataa gttttagcaa caggtgatag acctgctccc
      661 tttaatccgt taaacttagc ttgatataaa catacaattt taaatatagt atttcttcat
      721 tactaaatag ctacttttac tttttaagag cgtgttatgt agtatcataa ttatgtaaac
      781 tgtataaaat tccaccgcat tttaggagct ggtgatatat gttgaaaaag aaaattttaa
      841 tattaactag tattatgtta att
//
LOCUS       DALMNS010000214          854 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.218, whole genome shotgun sequence.
ACCESSION   DALMNS010000214 DALMNS010000000
VERSION     DALMNS010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 854)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 854)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.218"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..198
                     /locus_tag="O6Y56_002650"
     CDS             <1..198
                     /locus_tag="O6Y56_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014532440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HDB5575860.1"
                     /translation="LNEHSNGILRRSGLDKELDFNLITDNHIISVVQNINHRPRKSLG
                     YRTPLEVFMSFIEDDKLSSLI"
     gene            complement(266..763)
                     /locus_tag="O6Y56_002651"
     CDS             complement(266..763)
                     /locus_tag="O6Y56_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDB5575861.1"
                     /translation="MIINLETQQIHFDLEHETPYFQSPEKNRIRLDIDVLNKKQISNI
                     INVIFNNQSKTKCTFLSEYLYPVKFREKTRIGRFFNITNWYEEIHSTDEKYVIATIKN
                     IKNKDLIDYSLYIKKGLVEPFIVFYNQENIFYISNTVIDIISVSKDTLGYIKSEFNDH
                     CASPY"
     gene            complement(765..>854)
                     /locus_tag="O6Y56_002652"
     CDS             complement(765..>854)
                     /locus_tag="O6Y56_002652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000790915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575862.1"
                     /translation="WKGASSIKNLGSKKTRSGTYDANLKRIGD"
BASE COUNT          288 a          127 c          119 g          320 t
ORIGIN      
        1 ttaaatgaac attctaacgg aatacttaga cgcagtggat tagataaaga actggatttc
       61 aatttaataa cggataatca tatcatcagt gttgttcaaa atatcaatca tcgtcctaga
      121 aaatctttag gttatagaac accattggaa gtatttatga gtttcatcga agatgataaa
      181 ctgtccagct taatttgaca atctaaagct atataaaaaa gccgttggtc tcttcgaaac
      241 tacggctttt ctccgtgcta taaaatcagt atggcgaagc acagtgatca ttgaattctg
      301 actttatata accaagagta tctttggata cactgatgat atctataaca gtattgctaa
      361 tgtagaatat attttcttga ttatagaata caataaatgg ctccactaaa ccttttttaa
      421 tatataaaga ataatcaatt aagtctttgt tttttatatt tttaatagtt gcaataacat
      481 acttctcatc ggtagaatgg atttcttcgt accagttagt aatattaaaa aaacgaccaa
      541 ttcttgtttt ttctctaaat ttaacaggat ataagtattc agacaaaaat gtacatttcg
      601 tctttgattg gttattaaat ataacattaa taatattaga aatttgcttt ttattgagaa
      661 catcaatatc taagcgtatc ctatttttct caggtgattg aaaataggga gtttcatgtt
      721 ctaaatcaaa atgtatttgt tgtgtttcaa gattaataat cattttaatc tccaattctt
      781 tttaggttag catcgtatgt accacttctt gttttcttgc tacctaaatt cttaatactg
      841 cttgcacctt tcca
//
LOCUS       DALMNS010000215          819 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.219, whole genome shotgun sequence.
ACCESSION   DALMNS010000215 DALMNS010000000
VERSION     DALMNS010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 819)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 819)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.219"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            507..731
                     /locus_tag="O6Y56_002653"
     CDS             507..731
                     /locus_tag="O6Y56_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575863.1"
                     /translation="MTKIMNQFKEIYNTIEKLLNDKSISNYRINQDTGVSYGGISESR
                     SGKRKVNNLTLETAEKLYNYQKQLEIMIED"
BASE COUNT          351 a           84 c          122 g          262 t
ORIGIN      
        1 tatggagttc tttctttttt acaagatgta tatgtataaa tggaaatgtt tattacatta
       61 cataaaaacc tttaggtgct cttagatgga tgttaatcat aaaacaaaga gattttgaaa
      121 aatataggct attataattt agaattacaa attattaatc ttgccattgg atatgggaat
      181 tcaaacatat cacttactcc aatttgtgga atgttaaata actataaaga ggaaaggaga
      241 aaaaatgata agaatggtta aagaaaaaga acgaatagca aaattaaatt tcgaatagct
      301 gtgacgagct taataattca agtacttaat tttatcaaat cgttctttta aaaaggcaaa
      361 gggcaaaaga cctttaccac attaaatagg gaggtggtat ttatgacaag agaattaagg
      421 aaaaaattaa ctctctacct taacattgca actttaatat tatttattat taatttaact
      481 agaaaaaaat aaactattct ttcattttga caaaaataat gaaccagttt aaagaaattt
      541 ataatacaat agaaaaatta ctaaatgata aatcaatatc taattataga attaatcaag
      601 acactggtgt ttcttatggt ggtataagtg aatcaagaag cgggaaaaga aaagtgaata
      661 atttaacttt agaaacagcg gaaaaactct ataattacca aaaacaatta gaaataatga
      721 ttgaagatta aaataaggcc atatcttttg aaatatcatg gagtgagcct tttaaatcat
      781 ataattttaa agtatattaa agatggatag cttaatgtg
//
LOCUS       DALMNS010000216          816 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.220, whole genome shotgun sequence.
ACCESSION   DALMNS010000216 DALMNS010000000
VERSION     DALMNS010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 816)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.220"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            57..743
                     /locus_tag="O6Y56_002654"
     CDS             57..743
                     /locus_tag="O6Y56_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDB5575864.1"
                     /translation="MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFFFTTSCL
                     VLTLVVVSSLSSSANASQTDNGVNRSGSEDPTVYSATSTKKLHKEPATFIKAIDGDTV
                     KLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQR
                     TDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNI
                     WSEDNADSGQ"
BASE COUNT          309 a          109 c          157 g          241 t
ORIGIN      
        1 ttataattaa ttaacgttta atattaaaat taactaaaaa gaaagaggtg ttagttatga
       61 cagaatactt attaagtgct ggcatatgta tggcaattgt ttcaatatta cttataggga
      121 tggctatcag taatgtttcg aaagggcaat acgcaaagag gtttttcttt ttcactacta
      181 gttgcttagt gttaacttta gttgtagttt caagtctaag tagctcagca aatgcatcac
      241 aaacagataa cggcgtaaat agaagtggtt ctgaagatcc aacagtatat agtgcaactt
      301 caactaaaaa attacataaa gaacctgcga catttattaa agcgattgat ggtgatacgg
      361 ttaaattaat gtacaaaggt caaccaatga cattcagact attattggtt gatacacctg
      421 aaacaaagca tcctaaaaaa ggtgtagaga aatatggtcc tgaagcaagt gcatttacga
      481 aaaaaatggt agaaaatgca aagaaaattg aagtcgagtt tgacaaaggt caaagaactg
      541 ataaatatgg acgtggctta gcgtatattt atgctgatgg aaaaatggta aacgaagctt
      601 tagttcgtca aggcttggct aaagttgctt atgtttataa acctaacaat acacatgaac
      661 aacttttaag aaaaagtgaa gcacaagcaa aaaaagagaa attaaatatt tggagcgaag
      721 acaacgctga ttcaggtcaa taatgctcat tgtaaaagtg tcactgctgc tagtggcact
      781 tttataattt ttagatcacg atatgattta ttatca
//
LOCUS       DALMNS010000217          803 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.221, whole genome shotgun sequence.
ACCESSION   DALMNS010000217 DALMNS010000000
VERSION     DALMNS010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 803)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 803)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.221"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..670
                     /locus_tag="O6Y56_002655"
     CDS             <1..670
                     /locus_tag="O6Y56_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="class D beta-lactamase"
                     /protein_id="HDB5575865.1"
                     /translation="VMYSMKKDKYYIYNEKESRKRYSPDSTYKIYLAMFGLDHHIISD
                     KNSRMSWNHKHYPFESWNKEQDLNTAMQNSVNWYFERISNQIPKNYTAAQLKQLNYGN
                     ENLGSYKSYWMEDSLKISNLEQVIVFKNMMEQNNHFSKKAKNQLSSSLLIKKNEKYEL
                     YGKTGTGIVNGKYNNGWFVGYVITNHDKYYFATHLSDGKPSGKNAELISEKILKEMGV
                     LNGQ"
     gene            660..>803
                     /locus_tag="O6Y56_002656"
     CDS             660..>803
                     /locus_tag="O6Y56_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001284656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HDB5575866.1"
                     /translation="MANKQVEISMAEWDVMNIIWDKKSVSANEIVVEIQKYKEVSDKT
                     IRTL"
BASE COUNT          337 a           86 c          143 g          237 t
ORIGIN      
        1 cgtcatgtac agcatgaaga aagacaaata ctatatttat aatgaaaaag aaagtagaaa
       61 aagatattct cctgattcaa cttataaaat ttatttagcg atgtttggac ttgaccatca
      121 tatcataagt gataaaaatt cacgtatgtc atggaatcat aaacattatc ctttcgagtc
      181 ttggaataag gaacaagatt taaatacagc aatgcaaaat tcagttaatt ggtacttcga
      241 acgtattagt aatcaaatac caaagaacta tactgcggct caactcaagc aattaaatta
      301 tggtaatgaa aacttgggaa gttataaaag ctattggatg gaagatagtt tgaaaatatc
      361 taatcttgaa caagtaatag tttttaaaaa tatgatggaa caaaataacc attttagtaa
      421 aaaagcaaag aatcaattat cttcttcatt attgattaag aaaaatgaaa agtatgaact
      481 gtatgggaaa acaggtacag gtatagtaaa cgggaagtat aataatgggt ggtttgtagg
      541 ttacgtaatt acaaatcatg ataagtatta ttttgctaca catttatcag atggaaagcc
      601 gtctgggaaa aatgctgaat taatcagtga aaaaatatta aaagaaatgg gtgttttaaa
      661 tggccaataa gcaagttgaa atatctatgg ctgaatggga tgttatgaat ataatatggg
      721 ataaaaaatc agtatcagct aatgaaattg tagttgaaat tcaaaaatat aaagaagtta
      781 gcgataaaac gattagaaca tta
//
LOCUS       DALMNS010000218          798 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.222, whole genome shotgun sequence.
ACCESSION   DALMNS010000218 DALMNS010000000
VERSION     DALMNS010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.222"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..706
                     /locus_tag="O6Y56_002657"
     CDS             <1..706
                     /locus_tag="O6Y56_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001226792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575867.1"
                     /translation="AYTNKSGFSEKSKVDGISVVGTINYDVPFQLQLLFVESGNSITI
                     STFTPGHINETSAAVAAMMYKRYEHEIEQARLKFKSEVEKNGYYAMNEKLQKKQEFNG
                     VTRQYLNFRTDSIDDLDKFKKEFKPVMHLKGDAFDQQLQNLINKYPEIKKSMKSDFIA
                     YYDKKSTKNVNKYSWDLQIPTNDTMKKIPGSKMMYFYKDSVSPSEIGEDGKLENKTNK
                     ITMSGGNWEEIQKEIK"
BASE COUNT          328 a          110 c          134 g          226 t
ORIGIN      
        1 ggcctatact aataaatctg gatttagcga gaaaagtaag gtagatggta tctcagtggt
       61 tggtactatc aattatgacg ttccttttca actccaattg ctttttgttg aatctggaaa
      121 tagcataact atttcaacat ttacacctgg tcatataaat gaaacatcag cggccgttgc
      181 agccatgatg tacaaacgtt atgaacatga aattgaacaa gctcgattaa aatttaaatc
      241 agaagttgag aaaaatggtt attatgccat gaatgaaaaa cttcaaaaga aacaagaatt
      301 taacggcgtt acaaggcaat acttgaattt cagaacagat agtatcgatg atctggataa
      361 gttcaaaaaa gaattcaaac ctgttatgca cttaaaaggt gatgcattcg atcaacagtt
      421 acaaaattta attaataaat atcctgaaat taagaaaagc atgaaatctg actttattgc
      481 ctattatgat aagaaaagca caaaaaatgt taataaatat tcatgggatt tacaaatacc
      541 aaccaatgac acaatgaaaa aaatacctgg atcgaaaatg atgtattttt ataaagacag
      601 tgtttctcca tctgaaattg gagaagatgg taagttagaa aataaaacta ataaaataac
      661 tatgtctggt ggaaattggg aagagattca aaaagaaata aagtagcgca atgtcaaaaa
      721 acaaatattt tatatttata tccccaaagc actaattatc atgaggagtc attaaaaatg
      781 agaaaactga taggcttc
//
LOCUS       DALMNS010000219          791 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.223, whole genome shotgun sequence.
ACCESSION   DALMNS010000219 DALMNS010000000
VERSION     DALMNS010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.223"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(219..>791)
                     /locus_tag="O6Y56_002658"
     CDS             complement(219..>791)
                     /locus_tag="O6Y56_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000072593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDB5575868.1"
                     /translation="DWKEKKLGDITEQSMYGIGASATRFDSKNIYIRITDIDEKSRKL
                     NYQNLTTPDELNNKYKLKRNDILFARTGASTGKSYIHKEEKDIYNYYFAGFLIKFEID
                     EQNNPLFIYQFTLTSKYNKWVKVMSVRSGQPGINSEEYAKLPLVLPNKLEQQKIAEFL
                     DRFDQQIELEKQKIEILQQQKKGLLQSMFI"
BASE COUNT          240 a          119 c           95 g          337 t
ORIGIN      
        1 caattctata ttaataatat gttcataatt ttgattagga catttttcat ataaaatagg
       61 agtttatctc acttataatt cattatccaa ttatatttta atatatacgt gatgcaattc
      121 aatattattc tcatgatttt tactgtaatg atttattatt tataagattt caaaaaaatc
      181 cctcactgac aaatagtggg ggattttatg cattactatt aaataaacat cgattgaagt
      241 aagccttttt tctgttgttg aagtatttct attttttgtt tttctaattc aatttgttgg
      301 tcaaatctat ctaagaattc tgctattttt tgctgttcta acttattggg caaaactaaa
      361 ggtaattttg catattcttc actattaatg cccggttgac cagatcttac agacatgacc
      421 ttcacccatt tgttatattt tgatgttagt gtaaattggt atatgaacaa aggattattt
      481 tgttcgtcta tttcaaattt tattaaaaat ccagcgaaat agtaattata aatatccttt
      541 tcttctttgt gaatataact tttgcccgtg ctagcaccag ttcgtgcaaa aagaatatca
      601 tttcttttca gcttgtactt attattaagt tcatcaggtg tagttaagtt ttgataattt
      661 aatttccttg atttttcatc aatatcagta attcttatat atatattttt cgaatcaaac
      721 cttgttgcag atgcacctat accatacata gattgttctg taatatcccc taacttcttc
      781 tctttccaat c
//
LOCUS       DALMNS010000220          791 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.224, whole genome shotgun sequence.
ACCESSION   DALMNS010000220 DALMNS010000000
VERSION     DALMNS010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.224"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(392..616)
                     /locus_tag="O6Y56_002659"
     CDS             complement(392..616)
                     /locus_tag="O6Y56_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575869.1"
                     /translation="MLIQERGLKMTELNNIINSLQSLFESESGYKISKNSGVPYQTVQ
                     DLRNGKTKLEDARFRTIIKLYSYYVSLKEH"
     gene            complement(573..719)
                     /locus_tag="O6Y56_002660"
     CDS             complement(573..719)
                     /locus_tag="O6Y56_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575870.1"
                     /translation="MKLFYIVFLIIIWLNIFLGNEIIHTLTVLITTLYIVNSRKGIKN
                     DRVE"
BASE COUNT          225 a          152 c          116 g          298 t
ORIGIN      
        1 ggggccccac cccaacttgc acgttattgt aagctgactt tctgccagct tctgtgttgg
       61 ggccccgcca acttgcacgt tattgtaagc tgactttctg ccagcttcta tgttggggcc
      121 ccgccaactt gcacattatt gtaagctgat ttttcgtcag cttctgtgtt ggggccccgc
      181 caacttgcat tgtctgtaga atttcttttt gaaattctct atgttggggc cccgcccata
      241 attgaaaaat gcttgttaca tgggcatttt cattcggtca actactacca atataatatt
      301 gtagagccta agacattgat ttattatgtc ttaggctcta ttccttcatt taatgattca
      361 attattttag caatacttta ttgtcccatg attagtgttc ttttaatgag acataataac
      421 tataaagttt aataatcgtt ctaaatctag catcttctag tttggttttc ccatttctta
      481 aatcttgtac tgtttgatat ggaactcctg aatttttcga aattttatag cctgattcag
      541 actcaaacaa agattgaaga gagtttataa tattattcaa ctctgtcatt tttaatcccc
      601 tttcttgaat taacaatata caatgttgtt attaaaacag tcagtgtatg gatgatttca
      661 tttcctaaaa atatattcag ccatataata ataagaaata cgatataaaa tagtttcatt
      721 ttaatcccct atcatatttt tattaatcaa atttcaataa gattcatcat taaaagctaa
      781 cctatactca a
//
LOCUS       DALMNS010000221          787 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.225, whole genome shotgun sequence.
ACCESSION   DALMNS010000221 DALMNS010000000
VERSION     DALMNS010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 787)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 787)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.225"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            106..576
                     /locus_tag="O6Y56_002661"
     CDS             106..576
                     /locus_tag="O6Y56_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575871.1"
                     /translation="MKRKVLVLTMGIICATQLWHSNHVNALVTESGANDTKQFTEIVS
                     EEKVITVEHAQINNFKSNSNSNLMEFNILTMGGKSGAMVGYSEIDSSHFTDRDKRVIR
                     RDHVKEAQSLVENYKDTQSADARMKAKQKVNTLSKPHQNYFNKQIDKVYNGLQR"
BASE COUNT          318 a          113 c          129 g          227 t
ORIGIN      
        1 agttaattat tgtttctaaa atattggtat ataattttca atggcgaaga aaacagggta
       61 aaaaagtcgg tttttaaatc aaagcaaata agggagcata aacaaatgaa aaggaaagta
      121 ctagtactaa caatgggtat aatttgtgca actcaattat ggcattctaa tcacgtaaac
      181 gcattagtga cagagagtgg cgcaaatgat actaagcaat ttactgaaat tgtatcggaa
      241 gagaaagtta taacagttga acatgctcaa ataaataatt ttaaatctaa tagcaattca
      301 aacctgatgg agttcaacat attaacaatg ggcggtaaat caggagctat ggttggttat
      361 agtgaaattg actcatcaca tttcacagac cgtgacaaac gcgttattag acgtgatcat
      421 gttaaagaag cacaaagctt agtagagaac tataaagata cacaaagtgc tgatgctagg
      481 atgaaagcca aacaaaaagt taacacttta agcaaaccgc atcaaaacta tttcaataaa
      541 caaattgata aggtatataa tggattacaa cgctaatcca aagtaaatta taagttatac
      601 atctcgtttt taaatgacaa tttatccccg taaatattat aaataatctt ttcaaattcc
      661 acatagatat agagacacta ataaacctct ttgtctcgat atgatagtct gcaacgattc
      721 atgttgtagg ctttttaatt ttacaaataa ggctaaatat ataagttctg acacctaaaa
      781 tatagaa
//
LOCUS       DALMNS010000222          768 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.226, whole genome shotgun sequence.
ACCESSION   DALMNS010000222 DALMNS010000000
VERSION     DALMNS010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.226"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            116..>768
                     /gene="sej"
                     /locus_tag="O6Y56_002662"
     CDS             116..>768
                     /gene="sej"
                     /locus_tag="O6Y56_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000750881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal enterotoxin type J"
                     /protein_id="HDB5575872.1"
                     /translation="MKKTIFILIFSLTLTLLITPLVYSDSKNETIKEKNLHKKSELSS
                     ITLNNLRHIYFFNEKGISEKIMTEDQFLDYTLLFKSFFISHSQYNDLLVQFDSKETVN
                     KFKGKQVDLYGSYYGFQCSGGKPNKTACMYGGVTLHENNQLYDTKKIPINLWIDSIRT
                     VVPLDIVKTNKKKVTIQELDLQARYYLHKQYNLYNPSTFDGKIQKGLIVFHTSKEPLV
                     "
BASE COUNT          309 a          116 c          102 g          241 t
ORIGIN      
        1 taatatttat ttctatcttc aatatttcaa catcctattt tttaaagtct tgcatgataa
       61 aagaatcagc cagcattact aaatgcagct aacttatatt taaggagtta acacaatgaa
      121 aaaaacaata tttatactga ttttctccct gacgttaaca ctactaataa cccctttagt
      181 ttacagcgat agcaaaaatg aaacaattaa agaaaagaat ttgcacaaaa aatcagagtt
      241 aagtagtatt actttaaata acctcagaca tatatacttc tttaacgaaa agggtatctc
      301 tgaaaagata atgacagaag atcaattttt agattacaca ctattattta aaagtttttt
      361 cataagtcat tcacagtata acgacttatt ggtacaattc gattcaaaag aaacagttaa
      421 taagtttaaa ggcaaacaag tagatctata cggatcttat tatggttttc aatgttctgg
      481 tggtaaacca aataaaacag catgtatgta tggtggagta acactgcatg aaaacaatca
      541 actttatgat actaaaaaaa tacctattaa tttatggatt gatagcatca gaactgttgt
      601 tccgctagat atagttaaaa caaataagaa aaaagtaacc attcaagaac tagatcttca
      661 ggcaagatat tatttacata aacaatataa tttatacaac cctagtacct ttgatggtaa
      721 aattcagaaa ggactaatcg tgtttcatac ctcaaaagaa ccgttggt
//
LOCUS       DALMNS010000223          702 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.231, whole genome shotgun sequence.
ACCESSION   DALMNS010000223 DALMNS010000000
VERSION     DALMNS010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.231"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..287)
                     /locus_tag="O6Y56_002663"
     CDS             complement(<1..287)
                     /locus_tag="O6Y56_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000882081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDB5575873.1"
                     /translation="MLCESKIINKNPKYRIIKYHDEYLMIDIISTWISLFFPFINWFI
                     PKEYVKISREEFENLNIVKPAKKNVFWPVAGISALFAVTLRKYTHLLDTQL"
     gene            complement(310..426)
                     /locus_tag="O6Y56_002664"
     CDS             complement(310..426)
                     /locus_tag="O6Y56_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575874.1"
                     /translation="MILNRGAILEQGNKKAKVIKSELITNYIMLATLQIKNN"
     gene            complement(483..>702)
                     /locus_tag="O6Y56_002665"
     CDS             complement(483..>702)
                     /locus_tag="O6Y56_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDB5575875.1"
                     /translation="ILIPTFKNICLSFFAYIFFGGLSTMALSMLVTSSPQNIIEFLAL
                     IGMTACFFLLNMSSVLDKNIHVILKTNK"
BASE COUNT          250 a           99 c           90 g          263 t
ORIGIN      
        1 tcaagttgag tgtcaagtaa atgtgtatac tttcttaatg taactgcgaa taaagcagag
       61 atacctgcaa ctggccaaaa aacattcttt ttagcaggtt taacaatatt taaattttca
      121 aactcttctc tactaatttt gacatattct tttgggatga accaattaat aaatggaaaa
      181 aataaactaa tccaagtgct tattatatcg atcattaagt actcatcatg atatttaata
      241 attctatatt ttgggttttt attgatgatt ttagattcgc atagcattga ttatcaattc
      301 caccttattc taattatttt ttatttgaag agtggctaac ataatataat tagttattaa
      361 ttcgcttttt ataactttgg cttttttatt tccctgttct aagatagctc ctcgatttaa
      421 aatcattgct ttttatggac caacatttaa gtatccgata ctacctaagt taatcaattt
      481 tactacttat ttgtttttaa aataacatga atatttttat ctaaaaccga tgacatattc
      541 agtagaaaga agcatgcagt catgccaatt aaagcaagaa attctattat attttgaggg
      601 gatgaagtga ctaacatact cagagccatt gttgacaatc caccaaaaaa tatataagca
      661 aaaaaagata aacaaatatt tttaaatgta ggtattaata tg
//
LOCUS       DALMNS010000224          614 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.233, whole genome shotgun sequence.
ACCESSION   DALMNS010000224 DALMNS010000000
VERSION     DALMNS010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 614)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.233"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(474..562)
                     /locus_tag="O6Y56_002666"
     tRNA            complement(474..562)
                     /locus_tag="O6Y56_002666"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(525..527),aa:Ser,seq:gga)
BASE COUNT          233 a           95 c           94 g          192 t
ORIGIN      
        1 taatttagtc gaatttatta aaaattgact aactcctggt tatgctacgc ttttctttaa
       61 aatccgcacg tagatgccga ttgattatat tattttttca agcgtatata taatatttga
      121 ttttctttaa ggaacaccta tacattacat atcaaaacga ttaggtgacg cagatgtaca
      181 tacaacgctt aaaacatatt cgcatttgat taaaaaattt gaagataatg aaactaaatt
      241 tatagaaaaa aatctgaatg atttgttttg tgactaaact tcaaaatctt gtgactaaaa
      301 ttaagattaa ccatcaaaaa ttagtcacat tgtggctaaa aatttttaaa tggatataaa
      361 taaataagaa gtataaaaat gatggtaata gctcaaatgc agatatatca aagggttgag
      421 tctaaaataa aaagagcgct taaaatgatt ttaaaccatt ttaagcgcta aaacggagag
      481 tgagggattc gaaccctcga gacacttgtg gcgcctacac actttccagg cgtgctcctt
      541 cggccaactc ggacaactct cctcaacaat aaatatgtaa taaaaaaaca gaagcgatat
      601 ttcacttctg tttg
//
LOCUS       DALMNS010000225          601 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.234, whole genome shotgun sequence.
ACCESSION   DALMNS010000225 DALMNS010000000
VERSION     DALMNS010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.234"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..596
                     /locus_tag="O6Y56_002667"
     CDS             <1..596
                     /locus_tag="O6Y56_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDB5575876.1"
                     /translation="KCGEVATQSAFKACGLTEPSAQNITHYMGIPIEESFLKLADRPL
                     DEAALAKLIDTFRHTYQSIEKDYIYEFAGITEAITSLYNQGKKLFVVSSKKSDVLERN
                     LSAIGLNHLITEAVGSDQVSAYKPNPEGIHTIVQRYNLNSQQTVYIGDSTFDVEMAQH
                     AGVPSAAVTWGAHDARSLLHSNPDFIINDPSEINTVL"
BASE COUNT          224 a           98 c          111 g          168 t
ORIGIN      
        1 aaaaatgtgg tgaagtagca acacaaagtg catttaaagc atgtggctta acagaaccat
       61 cagctcaaaa cataacgcat tatatgggaa tacctattga agaatcattt ttaaaattag
      121 cagaccgacc attagatgaa gcagcattag caaagttaat cgatacattt agacatacat
      181 atcaatctat tgaaaaggac tatatttatg aatttgcggg tataactgaa gccattacaa
      241 gtttgtataa ccaagggaaa aaacttttcg tggtgtctag taagaagagt gatgtattag
      301 aaagaaattt atcggctatt ggattaaatc acttgattac cgaagctgtt ggatccgacc
      361 aagtaagtgc atataaacca aatcctgaag gcatacacac aattgtgcaa cgctacaatt
      421 taaatagcca acaaacggtt tatattggtg attcaacatt tgatgttgag atggcgcaac
      481 atgctggtgt accatctgca gcagtaacat ggggagcaca tgatgcaagg tcattactcc
      541 attcaaatcc agattttata atcaatgatc catcagaaat taatacagta ttataaaatt
      601 t
//
LOCUS       DALMNS010000226          569 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.235, whole genome shotgun sequence.
ACCESSION   DALMNS010000226 DALMNS010000000
VERSION     DALMNS010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 569)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.235"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..>569
                     /locus_tag="O6Y56_002668"
     CDS             <1..>569
                     /locus_tag="O6Y56_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017432088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575877.1"
                     /translation="VLTSTALLFSSFEPVVHAAENKEVVKTVENDNVEFNELLEGQEY
                     IWEVLSRDDEGFKMFLDEQRAFNPNFDNDVLLAKQEGALNSSVFANNSMTLNSNKPTP
                     RGPIGATLKAIKALSPSLRHGGTAISWIIKPLSRKHAVLVKKYSRKMSNAIDRLDKST
                     KSAVENAFVKAGIPRSDAKTLTYIVFLVI"
BASE COUNT          202 a           72 c          101 g          194 t
ORIGIN      
        1 tggtactaac atctactgca ttattatttt ctagttttga acctgtagtt catgctgcag
       61 aaaataagga agttgttaaa acagtagaaa atgataatgt agaattcaat gaattgttag
      121 aaggacaaga atatatttgg gaagttttat ctagagatga tgaaggattt aaaatgtttc
      181 tagatgagca aagagctttt aatcctaatt ttgataatga tgttttacta gcaaaacaag
      241 aaggtgcttt aaattcttca gtatttgcta ataattctat gactttaaac tcaaataagc
      301 ctactcctag aggtcctatc ggtgcaactt taaaagctat taaggctcta tcaccttctt
      361 tgagacatgg tggaactgct atatcttgga tcattaaacc attaagtaga aaacatgctg
      421 ttctagtaaa aaaatattca agaaagatgt ctaatgcaat tgataggtta gataagtcta
      481 cgaaatcagc tgttgaaaat gcttttgtta aagcaggtat accaagaagt gatgcgaaaa
      541 ctttaactta tattgtattt ttagttatt
//
LOCUS       DALMNS010000227          565 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.236, whole genome shotgun sequence.
ACCESSION   DALMNS010000227 DALMNS010000000
VERSION     DALMNS010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.236"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..79
                     /locus_tag="O6Y56_002669"
     CDS             <1..79
                     /locus_tag="O6Y56_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020366422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDB5575878.1"
                     /translation="DGKMAYYFIKDDEIREFFSKNHEGF"
     gene            261..401
                     /locus_tag="O6Y56_002670"
     CDS             261..401
                     /locus_tag="O6Y56_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HDB5575879.1"
                     /translation="MQYNTTRSITENQDNKTLKDMTKSGKQRPWREKKIDNVRFCCKV
                     KK"
BASE COUNT          204 a           72 c          102 g          187 t
ORIGIN      
        1 agatggaaag atggcatatt attttattaa agacgatgaa ataagagagt ttttctctaa
       61 aaatcatgag ggtttttgaa acgagtttct tcttgtcttg atactatata gaaataacgc
      121 tcttttctaa aatccttttg aagcgttgat atgacggcgt ttcatactgt tttgcttggg
      181 gaaaataaaa tttgatataa aaaaactcca gtaatatgat tgaggtgtct aatctaaatc
      241 aatactggag ttctttttat atgcaatata atactactag aagtataacc gaaaatcaag
      301 ataataaaac gttaaaagat atgacgaaaa gtgggaaaca acgcccatgg agagaaaaga
      361 aaatagataa tgtaaggttc tgttgcaaag ttaaaaaata agtgtctaac cttatgttta
      421 aagtaatact ttgtattaac tagctagcat gatgctaatt acacggcatg gcgaaaaccc
      481 gtagatctga agagatctgc ggttcttttt atatagttca taaatacatt caatgcctgt
      541 gtattttatt ccgattgctt tattg
//
LOCUS       DALMNS010000228          553 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.237, whole genome shotgun sequence.
ACCESSION   DALMNS010000228 DALMNS010000000
VERSION     DALMNS010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.237"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..311
                     /locus_tag="O6Y56_002671"
     CDS             <1..311
                     /locus_tag="O6Y56_002671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002456552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDB5575880.1"
                     /translation="EKQNRHMLGHHLYNENKKRAILNNKKLPSYTILSIDLLNELLRE
                     KMSTGNLILSDELFDMKEIINFNQIIGKVHIDNVYIETRKGKVHYSKTGAHIVPYIDK
                     "
     gene            322..516
                     /locus_tag="O6Y56_002672"
     CDS             322..516
                     /locus_tag="O6Y56_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575881.1"
                     /translation="MRIEDAYRKDVIITLLNNEEYEGFVTDYENEFESETGNLVVDIQ
                     TDFAVYSFDETEIKSIRLLK"
BASE COUNT          232 a           56 c           97 g          168 t
ORIGIN      
        1 gcgaaaaaca aaatagacat atgttaggtc atcacctata taatgaaaat aaaaaaagag
       61 ccattttaaa taataagaaa ttgcctagct atacaatact ttctatagat ttattgaatg
      121 aattgttaag agaaaaaatg tcaacaggca atctaatatt aagtgatgag ctatttgata
      181 tgaaagagat tattaatttt aatcaaatta ttggaaaagt acatatcgat aatgtgtata
      241 ttgaaaccag aaaaggaaaa gtgcattatt cgaagacagg tgctcatata gtaccttata
      301 ttgataagta ggtgaaaagt attgagaatt gaagatgcat atcgtaaaga tgttattatc
      361 acgcttttga ataatgaaga atacgaaggg tttgtaactg actatgaaaa tgaattcgag
      421 agcgaaacag gaaatctagt tgtagatata cagactgatt ttgctgttta ttcgtttgat
      481 gaaactgaga taaaaagtat tagattatta aaataattac aaaatagcat cctttctaca
      541 cagataaaga gaa
//
LOCUS       DALMNS010000229          525 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.238, whole genome shotgun sequence.
ACCESSION   DALMNS010000229 DALMNS010000000
VERSION     DALMNS010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.238"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            43..>525
                     /locus_tag="O6Y56_002673"
     CDS             43..>525
                     /locus_tag="O6Y56_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDB5575882.1"
                     /translation="MNLNILKSFLVTSETKNLTKASELLNYSQSTVSTHIEKLEKQLD
                     VKLFYRKKYGMELTEEGLAYVKYAKVILDSNSEYEREIKGLYNKKVNISINMQESQYL
                     YRYYNKISEWLAEHPYVNLKFKSAHSNFYIKEEIANFKSDISLITDEKIINSNLTAIP
                     I"
BASE COUNT          221 a           67 c           79 g          158 t
ORIGIN      
        1 atgcagaatt cgataaaagt gaatcctaaa ggaggtacta ctttgaactt aaacatttta
       61 aaatcatttt tagtaactag tgaaacaaag aaccttacta aagcatcaga attacttaac
      121 tattcacagt caactgtatc tacacatatt gaaaaattag aaaagcaatt agatgttaaa
      181 ttattttata gaaaaaaata tggtatggaa ctaacggaag aaggcttagc atacgttaaa
      241 tacgctaaag tgattttaga tagtaatagc gaatacgaga gagaaataaa aggactttac
      301 aataagaagg taaatataag tattaacatg caagaaagtc agtatttgta tcgctactat
      361 aataagatta gtgaatggtt agctgaacac ccatatgtaa acttaaagtt taaatccgca
      421 cattctaatt tctatattaa agaagaaatt gctaatttta aatcggatat tagccttatc
      481 acagacgaaa agattattaa tagtaactta actgctattc ctata
//
LOCUS       DALMNS010000230          507 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.239, whole genome shotgun sequence.
ACCESSION   DALMNS010000230 DALMNS010000000
VERSION     DALMNS010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.239"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..312
                     /gene="sed"
                     /locus_tag="O6Y56_002674"
     CDS             <1..312
                     /gene="sed"
                     /locus_tag="O6Y56_002674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_128623913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal enterotoxin type D"
                     /protein_id="HDB5575883.1"
                     /translation="INGVQKEVSLDKVQTDKKNVTVQELDAQARRYLQKDLKLYNNDT
                     LGGKIQRGKIEFDSSDGSKVSYDLFDVKGDFPEKQLRIYSDNKTLSTEHLHIDIYLYE
                     K"
BASE COUNT          216 a           66 c           81 g          144 t
ORIGIN      
        1 ataaatggtg tacaaaaaga agtttcttta gataaagttc aaacagataa aaaaaatgtt
       61 accgtacaag aattagatgc acaagcaagg cgctatttgc aaaaggattt aaaattgtat
      121 aataatgata ctctcggagg aaaaatacag cgcggaaaaa tagagtttga ttcttctgat
      181 gggtctaaag tctcttatga tttatttgat gttaagggtg attttcccga aaaacaatta
      241 cgaatataca gtgataataa aacattatcc acagagcacc ttcatattga catctattta
      301 tatgaaaagt agtcaattca aatactttaa catcagacac taaagccatt tcaaagaatg
      361 ctaaagattt attaatcggt atcgaaaaaa ttcaggagac ttactagata aagcaaaaga
      421 aagagctaat aatctaaata ttgaagaaaa cagaaactta taaaaatatg gggtggaatt
      481 ttacaaatta tacaagctat catcaat
//
LOCUS       DALMNS010000231          502 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.240, whole genome shotgun sequence.
ACCESSION   DALMNS010000231 DALMNS010000000
VERSION     DALMNS010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.240"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..65)
                     /locus_tag="O6Y56_002675"
     CDS             complement(<1..65)
                     /locus_tag="O6Y56_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000192877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1024 family protein"
                     /protein_id="HDB5575884.1"
                     /translation="MTQMDNREQIEQSVISASAYNG"
     gene            complement(49..333)
                     /locus_tag="O6Y56_002676"
     CDS             complement(49..333)
                     /locus_tag="O6Y56_002676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001105600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575885.1"
                     /translation="MNYETGVQLGVMDARLKKMRKQRDEYKKQRDELIGDIGKLRERN
                     KDLEKKASAWDRYCKSVEKDLINEFGNDDERVKFGMELNNKIFTEDDTNG"
BASE COUNT          129 a          121 c           58 g          194 t
ORIGIN      
        1 ccgttatacg cactagcact gatcactgat tgttctattt gttcacggtt atccatttgt
       61 gtcatcctcc gtaaaaattt tattgtttaa ttccatccca aatttaactc tttcatcatc
      121 gttgccgaat tcgtttatta aatctttttc aacgctcttg caatacctat cccatgcgct
      181 tgctttcttc tctagatctt tgttacgttc tcttaactta cctatatccc caataagctc
      241 atctcgttgc ttcttgtact catcacgttg ttttctcatc ttcttcaacc tagcgtccat
      301 tacacctagt tggacccctg tttcatagtt cattctgtta cctccaataa atgtgatgat
      361 tcaaatatgt tgcctttaac ctcacagtca tatctaagga aggattttat gtctatatac
      421 tcaaagtaat cattttcgga gactgcgccc tcaaacataa aatcttttaa ttgaatacca
      481 tttacaacat caatagatat ta
//
LOCUS       DALMNS010000232          490 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.241, whole genome shotgun sequence.
ACCESSION   DALMNS010000232 DALMNS010000000
VERSION     DALMNS010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 490)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 490)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.241"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
BASE COUNT          179 a           81 c           52 g          178 t
ORIGIN      
        1 aaatacagca cagaagtaaa cgacgacctt tgtattatat catttctaat aattgagtta
       61 cagataactt ccgataagtt aaattatgaa aaccattctc tccaattctt tgtagttata
      121 cataaaaaag tatatggcat caccatctta attataaaat cacctgttca atttatccct
      181 agttcagtat aaagtctttt caaaaataaa ttaggtattt atagagtaag agatctagac
      241 agtaataaag aatctgaaaa atacttaatt aaaacatccc aatcccacca aactactatt
      301 accattagta gaattgatcc gcttattaag gtatctcttg ttgataaacc tttttgagtt
      361 ttactactgt tcctttattt tctctgaata taactttatg taactcatca taatgtttaa
      421 ataacttaca tctcatatat gctttataca caagtgtaaa ttatacttgt gttaattaca
      481 cttgtgtaac
//
LOCUS       DALMNS010000233          474 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.242, whole genome shotgun sequence.
ACCESSION   DALMNS010000233 DALMNS010000000
VERSION     DALMNS010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 474)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 474)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.242"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            102..458
                     /locus_tag="O6Y56_002677"
     CDS             102..458
                     /locus_tag="O6Y56_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4889 domain-containing protein"
                     /protein_id="HDB5575886.1"
                     /translation="MKNKKGFGLGISLIAIMLIVCIVLVIMMMTGGKKDTYYGIMKDN
                     ATIEKMISEKDESIEKNVKLPSDADVSVKKGDFVIVYKLADSDKIVKVKKVDHDDVPH
                     GLMMKIHDMGKMHMKH"
BASE COUNT          184 a           45 c           86 g          159 t
ORIGIN      
        1 gtctttttaa attaatttta tgtaatataa atactgcatt tgcaaactgt tgtactttta
       61 ggtataacag aattaactac atttaaggag attgatgaac cgtgaaaaat aaaaaaggtt
      121 ttggtcttgg tattagttta attgccatca tgttgattgt atgtattgta ctagtaatca
      181 tgatgatgac tggtggaaag aaagatacat attatggaat tatgaaagac aatgctacaa
      241 ttgaaaaaat gattagtgaa aaagatgaaa gcattgagaa aaacgttaaa ttaccttcag
      301 atgcagacgt ttcagttaaa aaaggtgatt ttgtaattgt ttataaatta gcagattctg
      361 ataaaattgt taaagtaaaa aaagttgatc atgacgatgt accacatggt ttaatgatga
      421 aaattcatga catgggcaaa atgcacatga aacactaatt aagctttaat tttg
//
LOCUS       DALMNS010000234          473 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.243, whole genome shotgun sequence.
ACCESSION   DALMNS010000234 DALMNS010000000
VERSION     DALMNS010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.243"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..225
                     /locus_tag="O6Y56_002678"
     CDS             <1..225
                     /locus_tag="O6Y56_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000429703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575887.1"
                     /translation="NITGVTQNKEQLDNSDEQSQQNEKTFSQEEVSQLIKERIARERK
                     KSDERIKDAKENNDSNEVAYLLKGGKVTKV"
BASE COUNT          202 a           64 c           77 g          130 t
ORIGIN      
        1 aatattaccg gtgtaactca gaacaaagag caactagaca acagtgatga acaatcacaa
       61 cagaatgaga aaacattttc tcaagaggaa gtatcacaat tgattaaaga gcgtatagct
      121 agagaacgca aaaaatcaga tgaacgtatt aaagatgcca aagaaaacaa tgatagcaat
      181 gaagtagctt atttattaaa aggtggtaaa gttacaaaag tataaggcga tcaaaatagt
      241 gtatcttttg tgccagggga aaaagcaaac gaattgttat ttgacagtaa acataattca
      301 attattatgt tacataacca tcctggacag tcaggatttt ctcttacaga cttgtattta
      361 tttatattta ataattctat taaaacactg acaattgtta caaataaagg tcaaacaaag
      421 tacttaacta agacaaaaga atattgcaaa tcaacttgta ttgattgtat aaa
//
LOCUS       DALMNS010000235          461 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.244, whole genome shotgun sequence.
ACCESSION   DALMNS010000235 DALMNS010000000
VERSION     DALMNS010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.244"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            11..>461
                     /locus_tag="O6Y56_002679"
     CDS             11..>461
                     /locus_tag="O6Y56_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001794633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDB5575888.1"
                     /translation="MDLQEDQLNQYGCEKIFNDHMSGSKSKRPGLDKAIEFARSGDTI
                     VVWRLDRLGRNMEDLIILVNELNNRGVSFHSLEENITMDKSSSTGQLLFHLFAAFAEF
                     ERNLILERSSAGRIAARARGRYGGRPEKLNKQDLKLLKTLYDNGTPIK"
BASE COUNT          170 a           58 c           95 g          138 t
ORIGIN      
        1 attacagaac ttggatttac aggaagatca gttaaatcaa tatggttgtg aaaagatatt
       61 taatgatcat atgagtggtt caaaaagtaa gcgacctggt ttagataaag ccattgaatt
      121 tgcgaggtca ggagatacga ttgttgtttg gagactagat agactaggac gtaacatgga
      181 agatttaatc atattagtta atgaacttaa taatcgaggc gtgagttttc atagtttaga
      241 agaaaatata acaatggata aatcaagttc tacaggacaa ttgttatttc atttattcgc
      301 agcatttgca gagtttgaac gtaatttaat tttagaacgt tcttcagcgg gacgaattgc
      361 agctcgtgct agaggacgct atggaggtcg acccgaaaaa ttaaataaac aagatttaaa
      421 attactcaaa acactttatg ataatggaac accaattaaa a
//
LOCUS       DALMNS010000236          461 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.245, whole genome shotgun sequence.
ACCESSION   DALMNS010000236 DALMNS010000000
VERSION     DALMNS010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.245"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            39..359
                     /locus_tag="O6Y56_002680"
     CDS             39..359
                     /locus_tag="O6Y56_002680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDB5575889.1"
                     /translation="MQAIKSNESFKSVINSDTPVIVKFEAGWCPDCRAMDLWIDPIVE
                     QYNDYQWYTVNRDELEDVVVENEVMGIPSLLVFKNGDKIAHLHSANAKSPEQVESFLA
                     ETFK"
BASE COUNT          171 a           67 c           82 g          141 t
ORIGIN      
        1 taataaaaat tattaaacta tctagaggag ttgttacaat gcaagcaatc aaaagtaatg
       61 aatcatttaa atctgtaatt aatagcgata cacctgtaat tgttaaattt gaggcaggat
      121 ggtgcccaga ctgtcgtgct atggatttat ggattgaccc aatcgtagaa caatataatg
      181 attaccaatg gtatactgtt aatcgtgatg aattagaaga tgtagttgtt gaaaatgaag
      241 ttatgggtat ccctagcttg ctagtattta aaaacggcga caaaattgca caccttcatt
      301 cagcaaatgc taagtcacct gaacaagttg aatcattttt agcagaaact tttaaataaa
      361 tactaaaata aaaatgtgta tatactgcac aataaaaagc tgagactgtg attgtaccga
      421 ctctagtaag ttagattaaa tctctaactc gatagatgtc c
//
LOCUS       DALMNS010000237          456 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.246, whole genome shotgun sequence.
ACCESSION   DALMNS010000237 DALMNS010000000
VERSION     DALMNS010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 456)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 456)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.246"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..369
                     /gene="spa"
                     /locus_tag="O6Y56_002681"
     CDS             <1..369
                     /gene="spa"
                     /locus_tag="O6Y56_002681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal protein A"
                     /protein_id="HDB5575890.1"
                     /translation="GNKPGKEDGNKPGKEDNKKPGKEDGNGVHVVKPGDTVNDIAKAN
                     GTTADKIAADNKLADKNMIKPGQELVVDKKQPANHADANKAQALPETGEENPFIGTTV
                     FGGLSLALGAALLAGRRREL"
BASE COUNT          179 a           87 c           86 g          104 t
ORIGIN      
        1 ggcaacaaac ctggcaaaga agacggcaac aaacctggta aagaagacaa caaaaaacct
       61 ggtaaagaag acggcaacgg agtacatgtc gttaaacctg gtgatacagt aaatgacatt
      121 gcaaaagcaa acggcactac tgctgacaaa attgctgcag ataacaaatt agctgataaa
      181 aacatgatca aacctggtca agaacttgtt gttgataaga agcaaccagc aaaccatgca
      241 gatgctaaca aagctcaagc attaccagaa actggtgaag aaaatccatt catcggtaca
      301 actgtatttg gtggattatc attagcgtta ggtgcagcgt tattagctgg acgtcgtcgc
      361 gaactataaa aacaaacaat acacaacgat agatatcatt ttatccaaac caattttaac
      421 ttatatacgt tgattaacac attcttattt gaaatg
//
LOCUS       DALMNS010000238          439 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.248, whole genome shotgun sequence.
ACCESSION   DALMNS010000238 DALMNS010000000
VERSION     DALMNS010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 439)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 439)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.248"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            5..124
                     /locus_tag="O6Y56_002682"
                     /pseudo
     CDS             5..124
                     /locus_tag="O6Y56_002682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002451275.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage capsid protein"
BASE COUNT          177 a           51 c           85 g          126 t
ORIGIN      
        1 agatatgata ccaggtgtga atgcgccacc tatgcatcct tggtgtagaa gtaccacagt
       61 gtcacatgtc ggcaattggc gagacaagtt ctttaaagag cgtgaaggta aatatcaggt
      121 agaaggttct tttattgaat cgggtgcact taataataaa agtgatgaat acggtatcaa
      181 aaggaacaga catgcccaaa tttattataa ttcagttaga aatcgagata aacagataga
      241 gatttctaaa attgctaaaa atactaatat aaataaaaat acaattcaaa gagtttatga
      301 acatatattt gaaaataagt atttattgga aagtggattt aaacaatttg atcctgactt
      361 ttatatggct caaagttggc aacgtttaag agaagggaaa aatattaaaa aaatggatat
      421 aataatgttg aaacatgaa
//
LOCUS       DALMNS010000239          424 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.249, whole genome shotgun sequence.
ACCESSION   DALMNS010000239 DALMNS010000000
VERSION     DALMNS010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 424)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 424)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.249"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..400)
                     /gene="splD"
                     /locus_tag="O6Y56_002683"
     CDS             complement(<1..400)
                     /gene="splD"
                     /locus_tag="O6Y56_002683"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease SplD"
                     /protein_id="HDB5575891.1"
                     /translation="MNKNIIIKSIAALTILTSITGVGTTVVDGIQQTAKAENSVKLIT
                     NTNVAPYSGVTWMGAGTGFVVGNHTIITNKHVTYHMKVGDEIKAHPNGFYNNGGGLYK
                     VTKIVDYPGKEDIAVVQVEEKSTQPKGRKFK"
BASE COUNT          108 a           86 c           62 g          168 t
ORIGIN      
        1 ctttgaattt tctacctttt ggttgcgttg atttttcttc aacttgtaca accgcaatat
       61 cttctttacc aggataatct acaatcttag taactttata aagtccacca ccgttattat
      121 aaaaaccatt aggatgtgct ttgatttcat caccgacttt catgtgatag gtaacatgtt
      181 tattggtaat gattgtatga tttccaacta caaatcctgt tccagcgccc atccatgtaa
      241 caccactgta tggtgcaaca ttcgtgttgg taattaattt cacactattt tctgctttgg
      301 ctgtttgttg aataccatca accactgttg tgccgacacc agttattgat gttaaaatcg
      361 tcaatgccgc aatacttttg atgattatat ttttattcat ttttgtgctc ctctgtttat
      421 tcat
//
LOCUS       DALMNS010000240          403 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.250, whole genome shotgun sequence.
ACCESSION   DALMNS010000240 DALMNS010000000
VERSION     DALMNS010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.250"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            93..335
                     /locus_tag="O6Y56_002684"
     CDS             93..335
                     /locus_tag="O6Y56_002684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YneF family protein"
                     /protein_id="HDB5575892.1"
                     /translation="MATWLAIIFIVAALILGLIGGFLLARKYMMDYLKKNPPINEEML
                     RMMMMQMGQKPSQKKINQMMTMMNKNMDQNMKSAKK"
     gene            322..>403
                     /locus_tag="O6Y56_002685"
     CDS             322..>403
                     /locus_tag="O6Y56_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575893.1"
                     /translation="MRKSKFAIDRGYFPDMEMASFYNQIYK"
BASE COUNT          160 a           45 c           76 g          122 t
ORIGIN      
        1 gtatcgatat taaaatactt gaataaacta gttcttgaaa taatgtgatg aatttagtaa
       61 aattcagtag gataaagaaa gcgggtgaaa caatggcaac ttggttagca attattttta
      121 tagtagctgc attaatttta ggtttaattg gaggtttcct tttagctaga aaatatatga
      181 tggactactt gaagaaaaac ccaccaatca acgaagaaat gcttcgtatg atgatgatgc
      241 aaatgggtca aaaaccttct cagaagaaaa ttaatcaaat gatgacgatg atgaataaaa
      301 atatggatca aaatatgaag agtgcgaaaa agtaaattcg caattgatag aggctatttt
      361 ccagatatgg aaatggcctc tttttataat caaatttata aga
//
LOCUS       DALMNS010000241          400 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.251, whole genome shotgun sequence.
ACCESSION   DALMNS010000241 DALMNS010000000
VERSION     DALMNS010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.251"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..288)
                     /locus_tag="O6Y56_002686"
     CDS             complement(<1..288)
                     /locus_tag="O6Y56_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000882081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF443 family protein"
                     /protein_id="HDB5575894.1"
                     /translation="MLCESKIINKKPKYRIIKYNDEYLMIDIISTWISLFFPFINWFI
                     PKRYVKISREEFENLNIVKPAKKNVFWPVAGISTLFAVTLRKYTHLLDTQLD"
BASE COUNT          140 a           55 c           46 g          159 t
ORIGIN      
        1 atcaagttga gtgtcaagta aatgcgtata ctttcttaat gtaactgcga ataaagtaga
       61 gatacctgca actggccaaa aaacattctt tttagcaggt ttaacaatat ttaaattttc
      121 aaactcttct ctactaattt tgacgtatct tttggggatg aaccaattaa taaaaggaaa
      181 aaataaacta atccaagtgc ttattatatc gatcattaag tactcatcat tatatttaat
      241 aattctatat tttggttttt tattgatgat tttagattcg catagcaata cttatcacta
      301 ccattccttt gtttattatt cttattaaaa tttttcaatt tcatttgatt taaataatac
      361 atgaacttta ttgtcatata gtgagcacat atttaaaaat
//
LOCUS       DALMNS010000242          396 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.252, whole genome shotgun sequence.
ACCESSION   DALMNS010000242 DALMNS010000000
VERSION     DALMNS010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 396)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 396)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.252"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..>396
                     /locus_tag="O6Y56_002687"
     CDS             <1..>396
                     /locus_tag="O6Y56_002687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575895.1"
                     /translation="AEEREDIKAIHQLMIEDLKQREMDGPFEKDSLYIINDFKTYIDC
                     TYIPEDDVKKLITKGPELGLNILFVGIHKELIDAYDKQIDVARKMINQFSIGIRISDQ
                     QFFKFRFIQREPVIKENEAYMVANQAYQK"
BASE COUNT          156 a           55 c           67 g          118 t
ORIGIN      
        1 ttgccgaaga aagagaagac attaaagcga ttcatcaact aatgattgaa gacttaaaac
       61 aaagagaaat ggacggtcca tttgaaaaag attcacttta cattatcaat gattttaaaa
      121 catatattga ttgcacgtat atcccggaag atgatgttaa aaagcttatt acaaaaggac
      181 cagaacttgg cttgaacatt ttatttgtcg gcattcataa agaattaata gatgcttatg
      241 ataaacagat tgatgttgca cgtaaaatga ttaaccaatt tagtataggt attcgtattt
      301 cagaccaaca attctttaaa tttagattta ttcaacgaga acctgttatt aaagaaaacg
      361 aagcgtatat ggtcgcgaat caagcttatc aaaaga
//
LOCUS       DALMNS010000243          373 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.253, whole genome shotgun sequence.
ACCESSION   DALMNS010000243 DALMNS010000000
VERSION     DALMNS010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.253"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..>373)
                     /locus_tag="O6Y56_002688"
     CDS             complement(<1..>373)
                     /locus_tag="O6Y56_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000028656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDB5575896.1"
                     /translation="CGSGSLLLRVGKETQVYRYFGQERNNTTYNLARMNMLLHDVRYE
                     NFEIRNDDTLENPAFLGNTFDAVIANPPYSAKWTADSKFENDERFSGYGKLAPKSKAD
                     FAFIQHMVHYLDDEGTMAVVLP"
BASE COUNT          103 a           79 c           74 g          117 t
ORIGIN      
        1 gggagtacga ctgccatggt accttcatcg tctaggtaat gtaccatgtg ttgaataaag
       61 gcaaagtctg ctttggattt tggcgcaagc ttgccgtaac cactgaatcg ttcatcattt
      121 tcaaattttg aatctgctgt ccatttcgca ctgtatggtg ggttcgcaat aaccgcatca
      181 aatgtattgc ctaaaaaggc tggattttcc aatgtgtcat cattacggat ctcgaagttc
      241 tcataacgca catcatgtaa taacatattc atgcgtgcta agttgtatgt agtattgtta
      301 cgttcttgtc cgaaataacg atacacttgc gtttctttac caacacgtaa caacaatgaa
      361 ccggaaccac atg
//
LOCUS       DALMNS010000244          357 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.254, whole genome shotgun sequence.
ACCESSION   DALMNS010000244 DALMNS010000000
VERSION     DALMNS010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 357)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 357)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.254"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            2..77
                     /locus_tag="O6Y56_002689"
     tRNA            2..77
                     /locus_tag="O6Y56_002689"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:35..37,aa:Asp,seq:gtc)
     gene            94..166
                     /locus_tag="O6Y56_002690"
     tRNA            94..166
                     /locus_tag="O6Y56_002690"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:127..129,aa:Phe,seq:gaa)
     gene            180..255
                     /locus_tag="O6Y56_002691"
     tRNA            180..255
                     /locus_tag="O6Y56_002691"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:213..215,aa:His,seq:gtg)
     gene            271..344
                     /locus_tag="O6Y56_002692"
     tRNA            271..344
                     /locus_tag="O6Y56_002692"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:303..305,aa:Gly,seq:tcc)
BASE COUNT           75 a           87 c           88 g          107 t
ORIGIN      
        1 aggtctcgta gtgtagcggt taacacgcct gcctgtcacg caggagatcg cgggttcgat
       61 tcccgtcgag accgccatta ttattaccat tacggttcag tagctcagtt ggtagagcaa
      121 tggattgaag ctccatgtgt cggcagttcg actctgtcct gaaccattat taattcatgg
      181 cggttgtggt gaagtggtta acacatcgga ttgtggttcc gacattcgag ggttcgatcc
      241 ccttcagccg ccccataatc gtttacatta gcgggtgtag tttaatggca aaacctcagc
      301 cttccaagct gatgttgtgg gttcgattcc catcacccgc tccattattt tctatta
//
LOCUS       DALMNS010000245          320 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.257, whole genome shotgun sequence.
ACCESSION   DALMNS010000245 DALMNS010000000
VERSION     DALMNS010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.257"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            108..200
                     /locus_tag="O6Y56_002693"
     CDS             108..200
                     /locus_tag="O6Y56_002693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002495832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Fst family toxin"
                     /protein_id="HDB5575897.1"
                     /translation="MLIIFVHIIAPVISGCAVAYYTYWLSKRNK"
BASE COUNT          100 a           58 c           61 g          101 t
ORIGIN      
        1 ttaatttaag aaagtaggcg attcaatcca atattcagag atgatataat atacaagtcg
       61 cctatctctc agtcgtcaac ttaggcgcag agaggaggtg cattactttg ctaatcattt
      121 tcgttcacat catagcacca gtcatcagtg gctgtgctgt tgcgtattat acttattggc
      181 ttagtaaacg caacaaataa ttaataggcg actttataag ccagcatcga aaaaatcccc
      241 acactactgc aatagtgtgg ggattggtgc attaattgtt aatcattttc gttatctaga
      301 ttataacact ggttagtaga
//
LOCUS       DALMNS010000246          312 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.258, whole genome shotgun sequence.
ACCESSION   DALMNS010000246 DALMNS010000000
VERSION     DALMNS010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 312)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 312)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.258"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            37..>312
                     /locus_tag="O6Y56_002694"
     CDS             37..>312
                     /locus_tag="O6Y56_002694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Csa1 family protein"
                     /protein_id="HDB5575898.1"
                     /translation="MRNSKRVVLYISIMVLSIFIIGCNSSSENAKKSKEDSKEEQIKK
                     SFAKTLDMYPIKNLEDLYDKEGYRDGEFKKGDKGTWVVRSEMIIQPKG"
BASE COUNT          138 a           31 c           67 g           76 t
ORIGIN      
        1 tcaacaaata ttaacatgat agagagaagt gaaaaaatga ggaattcaaa aagagtagta
       61 ttgtacataa gcattatggt gttgagcatt tttataattg gttgtaatag ttcaagcgag
      121 aatgcaaaaa aatcaaaaga agactcaaag gaagaacaaa tcaaaaagag ctttgcgaaa
      181 acgttagata tgtatccaat caaaaatctt gaagatttat atgacaaaga aggatatcga
      241 gatggcgaat ttaaaaaggg agacaaaggg acgtgggttg ttagatctga aatgataatt
      301 caaccaaaag gt
//
LOCUS       DALMNS010000247          296 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.259, whole genome shotgun sequence.
ACCESSION   DALMNS010000247 DALMNS010000000
VERSION     DALMNS010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.259"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..86
                     /gene="vraH"
                     /locus_tag="O6Y56_002695"
     CDS             <1..86
                     /gene="vraH"
                     /locus_tag="O6Y56_002695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008530244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptide resistance ABC transporter activity
                     modulator VraH"
                     /protein_id="HDB5575899.1"
                     /translation="VTTPIIGIPAGLLGGAYYLKRREEKGK"
     gene            137..296
                     /locus_tag="O6Y56_002696"
                     /pseudo
     CDS             137..296
                     /locus_tag="O6Y56_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558064.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
BASE COUNT           96 a           53 c           57 g           90 t
ORIGIN      
        1 ccgttacaac gccaattata ggtattccag ctggtttatt aggtggcgct tattatttaa
       61 aacgccgtga agaaaaaggt aaataaataa gccttctgtg ctaaactcaa tatgtatttc
      121 ctaccataga aaacataagg agtttggaca tcttgaagga gatactattg ttggtcgtcg
      181 tcatggtagt gcaatcatta ctttggtaga aagagtatcc aagatgatta tcaccttacg
      241 acccttaggt cgtaaggcaa ctgatataga aaacactcta cactcaatgt tttcat
//
LOCUS       DALMNS010000248          292 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.260, whole genome shotgun sequence.
ACCESSION   DALMNS010000248 DALMNS010000000
VERSION     DALMNS010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.260"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..240
                     /locus_tag="O6Y56_002697"
     CDS             <1..240
                     /locus_tag="O6Y56_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001622764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HDB5575900.1"
                     /translation="VWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIKRISF
                     GYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA"
BASE COUNT          128 a           36 c           43 g           85 t
ORIGIN      
        1 gtatggaaag tggttaaata ttatagaaaa catcaaagga tgttaagaaa tacaatttat
       61 tacccagcat ttaataatgg tgctatagaa ggaattaata ataagataaa attaatcaag
      121 cgaatttctt ttggttacag aaatttcaac aactttaaag cacgtataat gatgattttc
      181 agcttataca aaggagaaaa aaagaagaca accaagccca ataatggact ggccgcctaa
      241 taataaaaac tctaaaagtt gtaatttaaa atagttcttt aaattatata cc
//
LOCUS       DALMNS010000249          288 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.261, whole genome shotgun sequence.
ACCESSION   DALMNS010000249 DALMNS010000000
VERSION     DALMNS010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 288)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 288)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.261"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
BASE COUNT          112 a           43 c           35 g           98 t
ORIGIN      
        1 tgggacgacg aaataaaatt tgcgaaaata tcatttctgt cccactccca tcaaaagaat
       61 gacattgaaa agaaatatta aagtttggca ccataatttt ctttctgctc aatgaaataa
      121 tacgtttaaa tattgaatta aatcattcgc gaaattgata attattctca attaataaaa
      181 aatacttatt acaccttacc tgaatgataa gttttgctta tatactctga ttaaaaagtc
      241 aaaacctaaa ttaagcgttt tctaagcatg atgagttgtt tatcaata
//
LOCUS       DALMNS010000250          287 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.262, whole genome shotgun sequence.
ACCESSION   DALMNS010000250 DALMNS010000000
VERSION     DALMNS010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.262"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..>287
                     /locus_tag="O6Y56_002698"
     CDS             <1..>287
                     /locus_tag="O6Y56_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000277741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDB5575901.1"
                     /translation="ISRYVNEIVETIPESEFDEFRHHRGATSYHPKMMLKIILYAYTQ
                     SVFSGRRIEKLLHDSIRMMWLAQNQTPSYKTINRFRVNPNTDALIESLFIQ"
BASE COUNT          100 a           47 c           42 g           98 t
ORIGIN      
        1 atttcgcgat atgttaatga aattgttgaa acgatacctg aaagcgaatt cgatgaattc
       61 agacatcatc gtggcgcaac atcctatcat ccaaaaatga tgttaaaaat tatcttatat
      121 gcatacactc aatctgtatt ttctggtcgt agaatagaga aattacttca tgacagtatt
      181 cgaatgatgt ggttagctca aaatcaaaca ccttcttata aaactattaa tcgttttaga
      241 gtaaatccta atactgatgc attaattgaa tctttattta tccagtt
//
LOCUS       DALMNS010000251          287 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.263, whole genome shotgun sequence.
ACCESSION   DALMNS010000251 DALMNS010000000
VERSION     DALMNS010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.263"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..211)
                     /locus_tag="O6Y56_002699"
     CDS             complement(<1..211)
                     /locus_tag="O6Y56_002699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001614602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575902.1"
                     /translation="MYAMLFPIVTIPFLGERRNKRFFLEKNNNEVIEREIIDRVYING
                     KDKLILKDGEGIQTEKNVTDIDNLTF"
BASE COUNT           93 a           48 c           35 g          111 t
ORIGIN      
        1 taaatgttaa attatctata tctgtaacat tcttttcagt ttgaatacct tcgccatctt
       61 ttaaaattaa tttatctttt ccgttgatat agacacggtc aatgatttct ctttctataa
      121 cctcgttatt attcttttct aaaaagaatc gcttatttct acgttctcca agaaaaggaa
      181 ttgtaactat tggaaacaac atggcataca taatgattaa aatggtgaat gaaccaatgt
      241 tatcccattt agatatatat tccataactt cgtctttagg ataggca
//
LOCUS       DALMNS010000252          282 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.264, whole genome shotgun sequence.
ACCESSION   DALMNS010000252 DALMNS010000000
VERSION     DALMNS010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 282)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.264"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..>282)
                     /locus_tag="O6Y56_002700"
     CDS             complement(<1..>282)
                     /locus_tag="O6Y56_002700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HDB5575903.1"
                     /translation="KPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDWDRE
                     HPRVIWDNDVPINESSCVSCGQCATVCPCNAMMEVNMEGNAGYMTDTEP"
BASE COUNT           87 a           70 c           38 g           87 t
ORIGIN      
        1 caggttccgt atcagtcata taacccgcat taccttccat attcacttcc atcatggcat
       61 tacatggaca tacagttgcg cattgaccac aagatacaca tgacgattca ttaattggta
      121 catcattatc ccaaataaca cgtggatgtt cacgatccca atcaattcta atagtttcat
      181 tcacttcgat atcttgacat gcttctacac aacgcccaca taagatacat tgatttggat
      241 cataacgata aaatgggcca taatcctttt catatggctt ct
//
LOCUS       DALMNS010000253          277 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.265, whole genome shotgun sequence.
ACCESSION   DALMNS010000253 DALMNS010000000
VERSION     DALMNS010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.265"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
BASE COUNT          101 a           52 c           38 g           86 t
ORIGIN      
        1 aatctctcaa aaagttttct cggcataaaa gtacctctaa cttttataca taaagtcatg
       61 agcataaggg aaagtgccac cacttttata ttttggcaga cccataacgt ggtgaactcg
      121 gcagtgccga gttatttttc ctagaaaaaa agtgacatca cttttttaac tcatatgtat
      181 aaaaaccata acgttatgta tacatacggg ttacgtatac atatacttta tgtatataaa
      241 acatacacaa aagacatgca tcatacacat caatttt
//
LOCUS       DALMNS010000254          275 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.267, whole genome shotgun sequence.
ACCESSION   DALMNS010000254 DALMNS010000000
VERSION     DALMNS010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.267"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
BASE COUNT           84 a           59 c           40 g           92 t
ORIGIN      
        1 cgccagcttc tatgttgggg cccacacccc aactcgcatt gcctgtagaa tttcttttcg
       61 aaattctctg tgttggggcc cctgactaga gttgaaaaaa agcttgttgc aagcgcattt
      121 tcattcagtc aactactgcc aatataatat tatagatcct aggacattga tttatgtccc
      181 aagctcatca acgaatcaga catcactctt taaaaattca taatgtttaa taaatattta
      241 ttttaaattc ctaatctaaa gcgaaatatt tctat
//
LOCUS       DALMNS010000255          272 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.268, whole genome shotgun sequence.
ACCESSION   DALMNS010000255 DALMNS010000000
VERSION     DALMNS010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 272)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 272)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.268"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..217
                     /locus_tag="O6Y56_002701"
     CDS             <1..217
                     /locus_tag="O6Y56_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575904.1"
                     /translation="KSVTYKYFPNNDENIKPGIIQMDIDSLEVINAEKSSLEKNIRDN
                     YFIHAIDRIYINTSKGLFPESELVAWG"
BASE COUNT          114 a           28 c           36 g           94 t
ORIGIN      
        1 taaaagtgtt acatataaat attttcctaa taatgatgaa aatattaagc ctggtattat
       61 tcaaatggat atagatagtc ttgaagttat caatgctgaa aaatctagtt tagaaaaaaa
      121 tataagagat aattatttta ttcatgccat agacagaata tacataaata ctagtaaagg
      181 gctatttcct gaatctgaac tcgtagcatg gggataaaga aagtttactt aaaaaaattt
      241 catatttaat tttaaaaatt ttaaccttct aa
//
LOCUS       DALMNS010000256          264 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.269, whole genome shotgun sequence.
ACCESSION   DALMNS010000256 DALMNS010000000
VERSION     DALMNS010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.269"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
BASE COUNT          108 a           27 c           35 g           94 t
ORIGIN      
        1 atgtttaaac tacggtcatt ttgtgaaaat aaagataata actattcatt ttacattagt
       61 gaaaagtcag tatacgacaa caattgatat tgcggtaaga ccttgtgtta cagtattcta
      121 tatttaagta ctgcaatcag aaataacaaa attccattaa ctgattatta aatatttgag
      181 ttaataaata attaatgatt gtagcttgaa aattttaaaa catggttatt gatttgtgat
      241 aaaatttaaa cgtaaacaaa ctaa
//
LOCUS       DALMNS010000257          259 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.270, whole genome shotgun sequence.
ACCESSION   DALMNS010000257 DALMNS010000000
VERSION     DALMNS010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.270"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            190..>259
                     /locus_tag="O6Y56_002702"
     CDS             190..>259
                     /locus_tag="O6Y56_002702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01741 family protein"
                     /protein_id="HDB5575905.1"
                     /translation="MTFEEKLSEIYNKIANEISGMIP"
BASE COUNT           95 a           27 c           53 g           84 t
ORIGIN      
        1 ctcgaaatta tttggaattc cagttatcgt aacaatagtt gcaattattt tagttccatt
       61 agtgaattta ggtatgaaat gagtaatatt aatttgaaga agcattaagc gacgtagagg
      121 tgttgtttag tgctttttat ttaacggaaa tgaaaccaat atctattttg aaaatatagg
      181 ggcgataaca tgactttcga agaaaaacta agtgaaatat acaacaagat tgcgaatgag
      241 attagtggga tgataccag
//
LOCUS       DALMNS010000258          257 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.271, whole genome shotgun sequence.
ACCESSION   DALMNS010000258 DALMNS010000000
VERSION     DALMNS010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.271"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            33..161
                     /locus_tag="O6Y56_002703"
     CDS             33..161
                     /locus_tag="O6Y56_002703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575906.1"
                     /translation="MIKTMSIENMRTYQQRVYNLWIKGVDNVIYCGYQVGKQKIND"
BASE COUNT          103 a           21 c           48 g           85 t
ORIGIN      
        1 atttcataaa gaaaatgtat taacaatgga ttttgataaa aacaatgtca atagagaaca
       61 tgcgtactta tcaacaaaga gtgtataact tgtggataaa aggtgttgat aacgtcattt
      121 attgtggata tcaggtggga aaacagaaaa taaatgattg attagtgtta atttacttgt
      181 ggataactag gataactctg tggatagcta taatatcagc gtttttattg tgaataaaaa
      241 aatttaaaat ttgtaaa
//
LOCUS       DALMNS010000259          257 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.272, whole genome shotgun sequence.
ACCESSION   DALMNS010000259 DALMNS010000000
VERSION     DALMNS010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.272"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..255
                     /locus_tag="O6Y56_002704"
     CDS             <1..255
                     /locus_tag="O6Y56_002704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Csa1 family protein"
                     /protein_id="HDB5575907.1"
                     /translation="GDISYNSEAPIYSAKYQLKNDDYNVKELRKRYDIPTEKAPKLLL
                     KGSGDLKGSSVGYKEIEFIFLENKKENIYFSDGLNLIPSD"
BASE COUNT          103 a           30 c           46 g           78 t
ORIGIN      
        1 ggtgacattt cctacaattc tgaagctcct atttattcag cgaaatatca actgaaaaat
       61 gatgattata atgttaaaga attacgaaaa agatatgata ttccaacaga aaaggcgccc
      121 aaattgttgt tgaaaggttc gggggatttg aaagggtctt cagttggata taaggaaatt
      181 gaatttatat tcctagaaaa taaaaaagaa aatatatatt tttcagatgg attaaactta
      241 attccaagtg actaaaa
//
LOCUS       DALMNS010000260          252 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.273, whole genome shotgun sequence.
ACCESSION   DALMNS010000260 DALMNS010000000
VERSION     DALMNS010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 252)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 252)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.273"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..150
                     /locus_tag="O6Y56_002705"
     CDS             <1..150
                     /locus_tag="O6Y56_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HDB5575908.1"
                     /translation="VDTVGRNKKVIENYIRNQLQEDIVADQISMEEYLDPFTGEKNRK
                     RKKKE"
BASE COUNT           95 a           38 c           59 g           60 t
ORIGIN      
        1 gtggatacag taggtagaaa taaaaaagtg attgaaaatt atattcgtaa tcaattacaa
       61 gaggatatcg ttgcagacca aatctcaatg gaagaatatt tagatccttt cactggagag
      121 aaaaatagaa aaagaaagaa aaaagagtaa ccctttaggg ttgctgaaat agtagtgcag
      181 ttggctgact tgtcagtgcc cttttagggc tggccagtaa ggaaggctta tagccgcaga
      241 acaaaccacc cg
//
LOCUS       DALMNS010000261          251 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.274, whole genome shotgun sequence.
ACCESSION   DALMNS010000261 DALMNS010000000
VERSION     DALMNS010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.274"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            181..>251
                     /locus_tag="O6Y56_002706"
     CDS             181..>251
                     /locus_tag="O6Y56_002706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDB5575909.1"
                     /translation="MNDLKSKSNIKLMKRVLTTYELR"
BASE COUNT          113 a           26 c           37 g           75 t
ORIGIN      
        1 taacaaatga caaattcatt tattatccaa aaacaaaaac aattgaacaa aatcaaaata
       61 tagtgttatg attcatttgt gtttatagct agcacaacaa actaaatata tttggagtta
      121 ttactagtta aagacaaata ttatttgacg tgacaattaa aagtaaggga tgaagacttg
      181 atgaatgatt tgaaaagcaa gagcaatatt aaattaatga aaagagtatt aactacatat
      241 gagctgcgta a
//
LOCUS       DALMNS010000262          235 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.275, whole genome shotgun sequence.
ACCESSION   DALMNS010000262 DALMNS010000000
VERSION     DALMNS010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.275"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
BASE COUNT           98 a           27 c           46 g           64 t
ORIGIN      
        1 gggccaaaat tttgttagtg tcacaaaagt gtgacacctt tttaatgaga aaagttgggt
       61 tattttggct aacaaagaac tgaaaattag aaatgtagat agtgaattgc tagattgatt
      121 aagaggatta gctaaagaga aaaacatatc gagaaatgaa ttaatatcag aaacattaga
      181 acagctatat ccactggaaa gttgtcaaaa atcatatgca gaacaatcat atcag
//
LOCUS       DALMNS010000263          234 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.276, whole genome shotgun sequence.
ACCESSION   DALMNS010000263 DALMNS010000000
VERSION     DALMNS010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 234)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 234)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.276"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            34..>234
                     /locus_tag="O6Y56_002707"
     CDS             34..>234
                     /locus_tag="O6Y56_002707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001796117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDB5575910.1"
                     /translation="MKNKGFDPSEYKLKFKVKVGHSVYQSSDGGNLIVGNEHIGTATA
                     EFNPTKHKLGVYESEIEKIIDYI"
BASE COUNT           96 a           24 c           46 g           68 t
ORIGIN      
        1 ataaaagact tcagtaaagc agttgaaaat gaattgaaaa ataaaggctt tgaccctagt
       61 gagtataaac ttaaatttaa ggtaaaagta ggacatagtg tgtatcaaag tagtgatgga
      121 ggaaatttaa ttgttggtaa tgaacatatt ggcactgcaa ctgccgaatt caatcctact
      181 aaacacaaat taggggtata tgaatctgaa atagaaaaga ttattgatta tatt
//
LOCUS       DALMNS010000264          227 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.277, whole genome shotgun sequence.
ACCESSION   DALMNS010000264 DALMNS010000000
VERSION     DALMNS010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 227)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 227)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.277"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            complement(<1..191)
                     /locus_tag="O6Y56_002708"
     CDS             complement(<1..191)
                     /locus_tag="O6Y56_002708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001269759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Csa1 family protein"
                     /protein_id="HDB5575911.1"
                     /translation="MRFLKRVVLYISIMALSIFIIGCDSSSDTSEKAKEDSKETQIKK
                     SFAKTLDMYPIKNLEDLYD"
BASE COUNT           63 a           43 c           24 g           97 t
ORIGIN      
        1 ttgtcatata aatcttcaag atttttaatt ggatacatat ctaacgtttt cgcaaagctc
       61 tttttgattt gtgtttcttt tgaatcttct tttgcttttt ccgaagtatc gcttgaacta
      121 tcacaaccta ttataaaaat gctcaaagcc ataatgctta tgtacaatac gactctcttt
      181 aaaaatctca tttctccact tctctctatc atgttaatat ttgttga
//
LOCUS       DALMNS010000265          212 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.278, whole genome shotgun sequence.
ACCESSION   DALMNS010000265 DALMNS010000000
VERSION     DALMNS010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.278"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            80..>212
                     /locus_tag="O6Y56_002709"
     CDS             80..>212
                     /locus_tag="O6Y56_002709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002458050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDB5575912.1"
                     /translation="MSSDTNSLAHTKWNCKYHIVFAPKYRRQVIYGKIKKDIGIILRQ
                     "
BASE COUNT           90 a           33 c           34 g           55 t
ORIGIN      
        1 cacaaaaaat gcatctctac gtgctagaat aaatattggt cagccaacca aaataatcaa
       61 cacgaggaga tgctatttaa tgtcatctga cacaaacagt ttagcacata caaaatggaa
      121 ttgtaagtat catattgtct ttgcacctaa atacagaaga caagtgatat atggaaaaat
      181 aaaaaaagat atagggatta tattgcgtca at
//
LOCUS       DALMNS010000266          211 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.279, whole genome shotgun sequence.
ACCESSION   DALMNS010000266 DALMNS010000000
VERSION     DALMNS010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.279"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..203
                     /locus_tag="O6Y56_002710"
     CDS             <1..203
                     /locus_tag="O6Y56_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014532440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HDB5575913.1"
                     /translation="GLNEHSNGILRRSGLDKELDFNLVTDDHIISVAQKINHRLRKSL
                     GYRTPLEVFMSFIEDDKLSSLI"
BASE COUNT           79 a           30 c           36 g           66 t
ORIGIN      
        1 gaggtttaaa tgaacattct aacggaatac ttagacgcag tggattagat aaagaactag
       61 atttcaattt agtaacggat gatcatatca tcagtgttgc tcaaaaaatc aatcatcgtc
      121 ttagaaaatc tttaggttat agaacaccat tagaagtatt tatgagtttc atcgaagatg
      181 ataaactgtc cagcttaatt tgacaatcta a
//
LOCUS       DALMNS010000267          203 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.281, whole genome shotgun sequence.
ACCESSION   DALMNS010000267 DALMNS010000000
VERSION     DALMNS010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.281"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
BASE COUNT           78 a           23 c           32 g           70 t
ORIGIN      
        1 tatatcacat aatatttaat tacttctttt aactggaaga tgtgtttatt tataaaacaa
       61 caagttttga tatttataat ggtagtagtt attcagtcaa ctacgaccaa tatatcattg
      121 tagagcgtag gaaattgatt tatgactcag gcacatcaaa tgagaagatt tataaaagag
      181 atatacaact ctaggaggta taa
//
LOCUS       DALMNS010000268          202 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.denovo.282, whole genome shotgun sequence.
ACCESSION   DALMNS010000268 DALMNS010000000
VERSION     DALMNS010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 202)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 202)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.denovo.282"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            17..99
                     /locus_tag="O6Y56_002711"
     tRNA            17..99
                     /locus_tag="O6Y56_002711"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:50..52,aa:Leu,seq:gag)
     gene            121..194
                     /locus_tag="O6Y56_002712"
     tRNA            121..194
                     /locus_tag="O6Y56_002712"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:153..155,aa:Gly,seq:tcc)
BASE COUNT           50 a           47 c           53 g           52 t
ORIGIN      
        1 ttaaatgcct atatccgcgg tcgtggcgga atggcagacg cgctaggttg agggcctagt
       61 gggagaaatc ccgtggaggt tcaagtcctc tcggccgcat caaaattctt aattaaataa
      121 gcgggtgtag tttaatggca aaacctcagc cttccaagct gatgttgtgg gttcgattcc
      181 catcacccgc tccatagata at
//
LOCUS       DALMNS010000269         1871 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.guided.178, whole genome shotgun sequence.
ACCESSION   DALMNS010000269 DALMNS010000000
VERSION     DALMNS010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.guided.178"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..432
                     /locus_tag="O6Y56_002713"
     CDS             <1..432
                     /locus_tag="O6Y56_002713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDB5575914.1"
                     /translation="SCGAMQENIDLYDVIIAQGASTDSNYVQQYQLPGHFAPIASYQL
                     LEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILGVEMESAALYMNAIY
                     AGVEALGVFTVSDHLIHETSTTPEERERAFTDMIEIALSLV"
     gene            439..1791
                     /gene="tet(38)"
                     /locus_tag="O6Y56_002714"
     CDS             439..1791
                     /gene="tet(38)"
                     /locus_tag="O6Y56_002714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001100300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(38)"
                     /protein_id="HDB5575915.1"
                     /translation="MNVEYSKIKKAVPILLFLFVFSLVIDNSFKLISVAIADDLNISV
                     TTVSWQATLAGLVIGIGAVVYASLSDAISIRTLFIYGVILIIIGSIIGYIFQHQFPLL
                     LVGRIIQTAGLAAAETLYVIYVAKYLSKEDQKTYLGLSTSSYSLSLVIGTLSGGFIST
                     YLHWTNMFLIALIVVFTLPFLFKLLPKENNTNKAHLDFVGLILVATIATTVMLFITNF
                     NWLYMIGALIAIIVFALYIKNAQRPLVNKSFFQNKRYASFLFIVFVMYAIQLGYIFTF
                     PFIMEQIYHLQLDTTSLLLVPGYIVAVIVGALSGKIGEYLNSKQAIITAIILIALSLI
                     LPAFAVGNHISIFVISMIFFAGSFALMYAPLLNEAIKTIDLNMTGVAIGFYNLIINVA
                     VSVGIAIAAALIDFKALNFPGNDALSSHFGIILIILGLMSIVGLVLFVILNRWTQSEK
                     "
BASE COUNT          575 a          284 c          336 g          676 t
ORIGIN      
        1 tcttgtggcg cgatgcaaga aaacattgat ttatatgatg tgattattgc acaaggtgcc
       61 tctactgatt caaattacgt tcaacaatat caattaccag gtcattttgc gccaattgct
      121 tcttatcagt tattagaaaa agcagttgaa acagcacgtg acaaaggtgt acgtcatcat
      181 gtaggtaatg tgttatcaag tgatattttc tataacgcgg atacaacagc gagtgaacgt
      241 tggatgcgta tgggtatttt aggtgtagaa atggaatcag ctgcattata catgaatgca
      301 atttacgctg gtgtcgaagc attaggtgtg ttcacagtga gcgatcattt aattcatgaa
      361 acgtcaacaa cacctgagga aagggaacgt gcatttacag atatgattga aattgcactg
      421 tcattggtgt agatgattat gaatgttgaa tattctaaaa taaagaaagc agtacctatt
      481 ttactattct tatttgtatt cagtttggtt atagacaact catttaaatt gatttctgta
      541 gccattgctg atgacttaaa tatctctgta acgacagtaa gttggcaagc gacattagcc
      601 ggtttagtaa ttggtattgg cgctgtagta tacgcttcat tatctgatgc cattagtata
      661 cgcacactat ttatttatgg cgtgatatta atcattatcg gatcaattat tggttacatt
      721 ttccaacatc aattcccatt acttttagtt ggacgtatta ttcaaactgc cggtttagct
      781 gctgcagaga cattatatgt gatatatgtt gcaaagtatc tttctaaaga ggaccagaag
      841 acttaccttg gcttaagtac gagcagttat tccttgtcat tagttatcgg tacattatca
      901 ggtggattta tttctacgta tttacactgg acaaatatgt ttttaattgc attaatcgta
      961 gtatttacgt tgccattcct atttaaatta ttaccaaaag aaaataatac aaataaagct
     1021 catttagatt ttgttggctt aattctagtg gcaactatcg ctacaacagt catgctgttt
     1081 attacgaact ttaattggtt atatatgatt ggtgccttaa ttgcgattat cgtttttgcg
     1141 ctatatatta aaaatgctca acgtccatta gtaaacaaat catttttcca aaataaacgt
     1201 tatgcttcat ttttatttat agtatttgta atgtatgcca tccaattggg ttatattttt
     1261 acgttcccat tcataatgga acaaatttat catcttcaac tagacacaac atcactgcta
     1321 ttagtaccgg gttatattgt agcagttatc gttggtgcac taagtggtaa aatcggtgaa
     1381 tatcttaatt caaaacaggc gattatcaca gcaattattt taatcgcact gagcttgatt
     1441 ttacctgcat ttgcagtagg taatcacatt tcaatcttcg tcatttctat gatattcttt
     1501 gcaggtagct ttgctttaat gtatgcacct ttacttaacg aagccattaa aacaatagat
     1561 cttaatatga caggtgtggc tattggtttt tataatttaa ttattaatgt ggcggtatct
     1621 gtaggtattg cgattgctgc ggctctaatc gattttaaag cattaaattt cccaggcaat
     1681 gatgcattaa gttcacattt cggtattatt ttaattattt taggtttaat gagtattgtc
     1741 ggattagttt tattcgtcat cttaaatcgt tggacacaat ctgaaaaata aatagatata
     1801 aattcgcgag atatattcgt atttatagta aaattaaata aagagattat ataacacgag
     1861 gagtagtaag t
//
LOCUS       DALMNS010000270         1871 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.guided.179, whole genome shotgun sequence.
ACCESSION   DALMNS010000270 DALMNS010000000
VERSION     DALMNS010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.guided.179"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..432
                     /locus_tag="O6Y56_002715"
     CDS             <1..432
                     /locus_tag="O6Y56_002715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDB5575916.1"
                     /translation="SCGAMQENIDLYDVIIAQGASTDSNYVQQYQLPGHFAPIASYQL
                     LEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILGVEMESAALYMNAIY
                     AGVEALGVFTVSDHLIHETSTTPEERERAFTDMIEIALSLV"
     gene            439..1791
                     /gene="tet(38)"
                     /locus_tag="O6Y56_002716"
     CDS             439..1791
                     /gene="tet(38)"
                     /locus_tag="O6Y56_002716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001100300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(38)"
                     /protein_id="HDB5575917.1"
                     /translation="MNVEYSKIKKAVPILLFLFVFSLVIDNSFKLISVAIADDLNISV
                     TTVSWQATLAGLVIGIGAVVYASLSDAISIRTLFIYGVILIIIGSIIGYIFQHQFALL
                     LVGRIIQTAGLAAAETLYVIYVAKYLSKEDQKTYLGLSTSSYSLSLVIGTLSGGFIST
                     YLHWTNMFLIALIVVFTLPFLFKLLPKENNTNKAHLDFVGLILVATIATTVMLFITNF
                     NWLYMIGALIAIIVFALYIKNAQRPLVNKSFFQNKRYASFLFIVFVMYAIQLGYIFTF
                     PFIMEQIYHLQLDTTSLLLVPGYIVAVIVGALSGKIGEYLNSKQAIITAIILIALSLI
                     LPAFAVGNHISIFVISMIFFAGSFALMYAPLLNEAIKTIDLNMTGVAIGFYNLIINVA
                     VSVGIAIAAALIDFKALNFPGNDALSSHFGIILIILGLMSIVGLVLFVILNRWTQSEK
                     "
BASE COUNT          576 a          282 c          337 g          676 t
ORIGIN      
        1 tcttgtggcg cgatgcaaga aaacattgat ttatatgatg tgattattgc acaaggtgcc
       61 tctactgatt caaattacgt tcaacaatat caattaccag gtcattttgc gccaattgct
      121 tcttatcagt tattagaaaa agcagttgaa acagcacgtg acaaaggtgt acgtcatcat
      181 gtaggtaatg tgttatcaag tgatattttc tataacgcgg atacaacagc gagtgaacgt
      241 tggatgcgta tgggtatttt aggtgtagaa atggaatcag ctgcattata catgaatgca
      301 atttacgctg gtgtcgaagc attaggtgtg ttcacagtga gcgatcattt aattcatgaa
      361 acgtcaacaa cacctgagga aagggaacgt gcatttacag atatgattga aattgcactg
      421 tcattggtgt agatgattat gaatgttgaa tattctaaaa taaagaaagc agtacctatt
      481 ttactattct tatttgtatt cagtttggtt atagacaact catttaaatt gatttctgta
      541 gccattgctg atgacttaaa tatctctgta acgacagtaa gttggcaagc gacattagcc
      601 ggtttagtaa ttggtattgg cgctgtagta tacgcttcat tatctgatgc cattagtata
      661 cgcacactat ttatttatgg cgtgatatta atcattatcg gatcaattat tggttacatt
      721 ttccaacatc aattcgcatt acttttagtt ggacgtatta ttcaaactgc aggtttagct
      781 gctgcagaga cattatatgt gatatatgtt gcaaagtatc tttctaaaga ggaccagaag
      841 acttaccttg gcttaagtac gagcagttat tccttgtcat tagttatcgg tacattatca
      901 ggtggattta tttctacgta tttacactgg acaaatatgt ttttaattgc attaatcgta
      961 gtatttacgt tgccattcct atttaaatta ttaccaaaag aaaataatac aaataaagct
     1021 catttagatt ttgttggctt aattctagtg gcaactatcg ctacaacagt catgctgttt
     1081 attacgaact ttaattggtt atatatgatt ggtgccttaa ttgcgattat cgtttttgcg
     1141 ctatatatta aaaatgctca acgtccatta gtaaacaaat catttttcca aaataaacgt
     1201 tatgcttcat ttttatttat agtatttgta atgtatgcca tccaattggg ttatattttt
     1261 acgttcccat tcataatgga acaaatttat catcttcaac tagacacaac atcactgcta
     1321 ttagtaccgg gttatattgt agcagttatc gttggtgcac taagtggtaa aatcggtgaa
     1381 tatcttaatt caaaacaggc gattatcaca gcaattattt taatcgcact gagcttgatt
     1441 ttacctgcat ttgcagtagg taatcacatt tcaatcttcg tcatttctat gatattcttt
     1501 gcaggtagct ttgctttaat gtatgcacct ttacttaacg aagccattaa aacaatagat
     1561 cttaatatga caggtgtggc tattggtttt tataatttaa ttattaatgt ggcggtatct
     1621 gtaggtattg cgattgctgc ggctctaatc gattttaaag cattaaattt cccaggcaat
     1681 gatgcattaa gttcacattt cggtattatt ttaattattt taggtttaat gagtattgtc
     1741 ggattagttt tattcgtcat cttaaatcgt tggacacaat ctgaaaaata aatagatata
     1801 aattcgcgag atatattcgt atttatagta aaattaaata aagagattat ataacacgag
     1861 gagtagtaag t
//
LOCUS       DALMNS010000271         1465 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.guided.192, whole genome shotgun sequence.
ACCESSION   DALMNS010000271 DALMNS010000000
VERSION     DALMNS010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.guided.192"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..432
                     /locus_tag="O6Y56_002717"
     CDS             <1..432
                     /locus_tag="O6Y56_002717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDB5575918.1"
                     /translation="SCGAMQENIDLYDVIIAQGASTDSNYVQQYQLPGHFAPIASYQL
                     LEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILGVEMESAALYMNAIY
                     AGVEALGVFTVSDHLIHETSTTPEERERAFTDMIEIALSLV"
     gene            439..>1465
                     /locus_tag="O6Y56_002718"
     CDS             439..>1465
                     /locus_tag="O6Y56_002718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001100300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5575919.1"
                     /translation="MNVEYSKIKKAVPILLFLFVFSLVIDNSFKLISVAIADDLNISV
                     TTVSWQATLAGLVIGIGAVVYASLSDAISIRTLFIYGVILIIIGSIIGYIFQHQFPLL
                     LVGRIIQTAGLAAAETLYVIYVAKYLSKEDQKTYLGLSTSSYSLSLVIGTLSGGFIST
                     YLHWTNMFLIALIVVFTLPFLFKLLPKENNTNKAHLDFVGLILVATIATTVMLFITNF
                     NWLYMIGALIAIIVFALYIKNAQRPLVNKSFFQNKRYASFLFIVFVMYAIQLGYIFTF
                     PFIMEQIYHLQLDTTSLLLVPGYIVAVIVGALSGKIGEYLNSKQAIITAIILIALSLI
                     LPAFAVGN"
BASE COUNT          448 a          231 c          268 g          518 t
ORIGIN      
        1 tcttgtggcg cgatgcaaga aaacattgat ttatatgatg tgattattgc acaaggtgcc
       61 tctactgatt caaattacgt tcaacaatat caattaccag gtcattttgc gccaattgct
      121 tcttatcagt tattagaaaa agcagttgaa acagcacgtg acaaaggtgt acgtcatcat
      181 gtaggtaatg tgttatcaag tgatattttc tataacgcgg atacaacagc gagtgaacgt
      241 tggatgcgta tgggtatttt aggtgtagaa atggaatcag ctgcattata catgaatgca
      301 atttacgctg gtgtcgaagc attaggtgtg ttcacagtga gcgatcattt aattcatgaa
      361 acgtcaacaa cacctgagga aagggaacgt gcatttacag atatgattga aattgcactg
      421 tcattggtgt agatgattat gaatgttgaa tattctaaaa taaagaaagc agtacctatt
      481 ttactattct tatttgtatt cagtttggtt atagacaact catttaaatt gatttctgta
      541 gccattgctg atgacttaaa tatctctgta acgacagtaa gttggcaagc gacattagcc
      601 ggtttagtaa ttggtattgg cgctgtagta tacgcttcat tatctgatgc cattagtata
      661 cgcacactat ttatttatgg cgtgatatta atcattatcg gatcaattat tggttacatt
      721 ttccaacatc aattcccatt acttttagtt ggacgtatta ttcaaactgc cggtttagct
      781 gctgcagaga cattatatgt gatatatgtt gcaaagtatc tttctaaaga ggaccagaag
      841 acttaccttg gcttaagtac gagcagttat tccttgtcat tagttatcgg tacattatca
      901 ggtggattta tttctacgta tttacactgg acaaatatgt ttttaattgc attaatcgta
      961 gtatttacgt tgccattcct atttaaatta ttaccaaaag aaaataatac aaataaagct
     1021 catttagatt ttgttggctt aattctagtg gcaactatcg ctacaacagt catgctgttt
     1081 attacgaact ttaattggtt atatatgatt ggtgccttaa ttgcgattat cgtttttgcg
     1141 ctatatatta aaaatgctca acgtccatta gtaaacaaat catttttcca aaataaacgt
     1201 tatgcttcat ttttatttat agtatttgta atgtatgcca tccaattggg ttatattttt
     1261 acgttcccat tcataatgga gcaaatttat catctgcaac tagacacaac atcactgtta
     1321 ttagtaccgg gttatatagt agcagtcatt gttggtgcat taagtggtaa aatcggcgaa
     1381 tatctgaatt caaaacaagc gattatcaca gcaattattt taatagcact gagcttgatt
     1441 ttacctgcat ttgcagtagg taatc
//
LOCUS       DALMNS010000272         1465 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.guided.193, whole genome shotgun sequence.
ACCESSION   DALMNS010000272 DALMNS010000000
VERSION     DALMNS010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 1465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.guided.193"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..432
                     /locus_tag="O6Y56_002719"
     CDS             <1..432
                     /locus_tag="O6Y56_002719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDB5575920.1"
                     /translation="SCGAMQENIDLYDVIIAQGASTDSNYVQQYQLPGHFAPIASYQL
                     LEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILGVEMESAALYMNAIY
                     AGVEALGVFTVSDHLIHETSTTPEERERAFTDMIEIALSLV"
     gene            439..>1465
                     /locus_tag="O6Y56_002720"
     CDS             439..>1465
                     /locus_tag="O6Y56_002720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001100300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDB5575921.1"
                     /translation="MNVEYSKIKKAVPILLFLFVFSLVIDNSFKLISVAIADDLNISV
                     TTVSWQATLAGLVIGIGAVVYASLSDAISIRTLFIYGVILIIIGSIIGYIFQHQFALL
                     LVGRIIQTAGLAAAETLYVIYVAKYLSKEDQKTYLGLSTSSYSLSLVIGTLSGGFIST
                     YLHWTNMFLIALIVVFTLPFLFKLLPKENNTNKAHLDFVGLILVATIATTVMLFITNF
                     NWLYMIGALIAIIVFALYIKNAQRPLVNKSFFQNKRYASFLFIVFVMYAIQLGYIFTF
                     PFIMEQIYHLQLDTTSLLLVPGYIVAVIVGALSGKIGEYLNSKQAIITAIILIALSLI
                     LPAFAVGN"
BASE COUNT          449 a          229 c          269 g          518 t
ORIGIN      
        1 tcttgtggcg cgatgcaaga aaacattgat ttatatgatg tgattattgc acaaggtgcc
       61 tctactgatt caaattacgt tcaacaatat caattaccag gtcattttgc gccaattgct
      121 tcttatcagt tattagaaaa agcagttgaa acagcacgtg acaaaggtgt acgtcatcat
      181 gtaggtaatg tgttatcaag tgatattttc tataacgcgg atacaacagc gagtgaacgt
      241 tggatgcgta tgggtatttt aggtgtagaa atggaatcag ctgcattata catgaatgca
      301 atttacgctg gtgtcgaagc attaggtgtg ttcacagtga gcgatcattt aattcatgaa
      361 acgtcaacaa cacctgagga aagggaacgt gcatttacag atatgattga aattgcactg
      421 tcattggtgt agatgattat gaatgttgaa tattctaaaa taaagaaagc agtacctatt
      481 ttactattct tatttgtatt cagtttggtt atagacaact catttaaatt gatttctgta
      541 gccattgctg atgacttaaa tatctctgta acgacagtaa gttggcaagc gacattagcc
      601 ggtttagtaa ttggtattgg cgctgtagta tacgcttcat tatctgatgc cattagtata
      661 cgcacactat ttatttatgg cgtgatatta atcattatcg gatcaattat tggttacatt
      721 ttccaacatc aattcgcatt acttttagtt ggacgtatta ttcaaactgc aggtttagct
      781 gctgcagaga cattatatgt gatatatgtt gcaaagtatc tttctaaaga ggaccagaag
      841 acttaccttg gcttaagtac gagcagttat tccttgtcat tagttatcgg tacattatca
      901 ggtggattta tttctacgta tttacactgg acaaatatgt ttttaattgc attaatcgta
      961 gtatttacgt tgccattcct atttaaatta ttaccaaaag aaaataatac aaataaagct
     1021 catttagatt ttgttggctt aattctagtg gcaactatcg ctacaacagt catgctgttt
     1081 attacgaact ttaattggtt atatatgatt ggtgccttaa ttgcgattat cgtttttgcg
     1141 ctatatatta aaaatgctca acgtccatta gtaaacaaat catttttcca aaataaacgt
     1201 tatgcttcat ttttatttat agtatttgta atgtatgcca tccaattggg ttatattttt
     1261 acgttcccat tcataatgga gcaaatttat catctgcaac tagacacaac atcactgtta
     1321 ttagtaccgg gttatatagt agcagtcatt gttggtgcat taagtggtaa aatcggcgaa
     1381 tatctgaatt caaaacaagc gattatcaca gcaattattt taatagcact gagcttgatt
     1441 ttacctgcat ttgcagtagg taatc
//
LOCUS       DALMNS010000273          702 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.guided.227, whole genome shotgun sequence.
ACCESSION   DALMNS010000273 DALMNS010000000
VERSION     DALMNS010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.guided.227"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            214..693
                     /locus_tag="O6Y56_002721"
     CDS             214..693
                     /locus_tag="O6Y56_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HDB5575922.1"
                     /translation="MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMG
                     RKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEM
                     IDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK"
BASE COUNT          252 a          102 c          121 g          227 t
ORIGIN      
        1 caatagcagt ttagtcgttg catagttagc taaccattta gacatcaaaa tgacatcata
       61 gtattttcaa gtgcaaaaaa gtactttttt gtgttaaacg ttttcataaa ttatgcaaaa
      121 tcattatttc tatcacactt tatgataaaa attgtgttaa attaaagata acttagtaat
      181 aaaaaatgaa atgatagaag aaggaggata attatgactt tatccattct agttgcacat
      241 gacttgcaac gagtaattgg ttttgaaaat caattacctt ggcacctacc aaatgatttg
      301 aagcatgtta aaaaattatc aacaggtcat actttagtaa tgggtcgaaa gacatttgaa
      361 tcgattggta aaccactacc gaatcgtcga aatgttgtac ttacttcaga tacaagtttc
      421 aacgtagagg gcgttgatgt aattcactct attgaagata tttaccaact accgggccat
      481 gttttcatat ttggagggca aacattattt gaagaaatga ttgataaagt ggacgacatg
      541 tatattactg ttattgaagg taaattccgt ggtgatacgt tctttccacc ttatacattt
      601 gaagactggg aagttgcctc ttcagttgaa ggtaaactag atgaaaaaaa tacaattcca
      661 catacctttc tacatttaat tcgtaaaaaa taagggggaa aa
//
LOCUS       DALMNS010000274          702 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.guided.228, whole genome shotgun sequence.
ACCESSION   DALMNS010000274 DALMNS010000000
VERSION     DALMNS010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.guided.228"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            214..693
                     /locus_tag="O6Y56_002722"
     CDS             214..693
                     /locus_tag="O6Y56_002722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HDB5575923.1"
                     /translation="MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMG
                     RKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEM
                     IDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK"
BASE COUNT          251 a          102 c          122 g          227 t
ORIGIN      
        1 caatagcagt ttagtcgttg catagttagc taaccattta gacatcaaaa tgacatcata
       61 gtattttcaa gtgcaaaaaa gtactttttt gtgttaaacg ttttcataaa ttatgcaaaa
      121 tcattatttc tatcacactt tatgataaaa attgtgttaa attaaagata acttagtaat
      181 aaaaaatgaa atgatagaag aaggaggata attatgactt tatccattct agttgcacat
      241 gacttgcaac gagtaattgg ttttgaaaat caattacctt ggcacctacc aaatgatttg
      301 aagcatgtta aaaaattatc aacaggtcat actttagtaa tgggtcgaaa gacatttgaa
      361 tcgattggta aaccactacc gaatcgtcga aatgttgtac ttacttcaga tacaagtttc
      421 aacgtagagg gcgttgatgt aattcactct attgaagata tttaccaact accgggccat
      481 gttttcatat ttggagggca aacattattt gaagaaatga ttgataaagt ggacgacatg
      541 tatattactg ttattgaagg taaattccgt ggtgatacgt tctttccacc ttatacattt
      601 gaagactggg aagttgcctc ttcagttgaa ggtaaactag atgagaaaaa tacaattcca
      661 catacctttc tacatttaat tcgtaaaaaa taagggggaa aa
//
LOCUS       DALMNS010000275          702 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.guided.229, whole genome shotgun sequence.
ACCESSION   DALMNS010000275 DALMNS010000000
VERSION     DALMNS010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.guided.229"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            214..693
                     /locus_tag="O6Y56_002723"
     CDS             214..693
                     /locus_tag="O6Y56_002723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HDB5575924.1"
                     /translation="MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMG
                     RKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEM
                     IDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK"
BASE COUNT          252 a          101 c          121 g          228 t
ORIGIN      
        1 caatagcagt ttagtcgttg catagttagc taaccattta gacatcaaaa tgacatcata
       61 gtattttcaa gtgcaaaaaa gtactttttt gtgttaaacg ttttcataaa ttatgcaaaa
      121 tcattatttc tatcacactt tatgataaaa attgtgttaa attaaagata acttagtaat
      181 aaaaaatgaa atgatagaag aaggaggata attatgactt tatccattct agttgcacat
      241 gacttgcaac gagtaattgg ttttgaaaat caattacctt ggcacctacc aaatgatttg
      301 aagcatgtta aaaaattatc aacaggtcat actttagtaa tgggtcgaaa gacatttgaa
      361 tcgattggta aaccactacc gaatcgtcga aatgttgtac ttacttcaga tacaagtttc
      421 aacgtagagg gcgttgatgt aattcattct attgaagata tttaccaact accgggccat
      481 gttttcatat ttggagggca aacattattt gaagaaatga ttgataaagt ggacgacatg
      541 tatattactg ttattgaagg taaattccgt ggtgatacgt tctttccacc ttatacattt
      601 gaagactggg aagttgcctc ttcagttgaa ggtaaactag atgaaaaaaa tacaattcca
      661 catacctttc tacatttaat tcgtaaaaaa taagggggaa aa
//
LOCUS       DALMNS010000276          702 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.guided.230, whole genome shotgun sequence.
ACCESSION   DALMNS010000276 DALMNS010000000
VERSION     DALMNS010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.guided.230"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            214..693
                     /locus_tag="O6Y56_002724"
     CDS             214..693
                     /locus_tag="O6Y56_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HDB5575925.1"
                     /translation="MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMG
                     RKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEM
                     IDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK"
BASE COUNT          251 a          101 c          122 g          228 t
ORIGIN      
        1 caatagcagt ttagtcgttg catagttagc taaccattta gacatcaaaa tgacatcata
       61 gtattttcaa gtgcaaaaaa gtactttttt gtgttaaacg ttttcataaa ttatgcaaaa
      121 tcattatttc tatcacactt tatgataaaa attgtgttaa attaaagata acttagtaat
      181 aaaaaatgaa atgatagaag aaggaggata attatgactt tatccattct agttgcacat
      241 gacttgcaac gagtaattgg ttttgaaaat caattacctt ggcacctacc aaatgatttg
      301 aagcatgtta aaaaattatc aacaggtcat actttagtaa tgggtcgaaa gacatttgaa
      361 tcgattggta aaccactacc gaatcgtcga aatgttgtac ttacttcaga tacaagtttc
      421 aacgtagagg gcgttgatgt aattcattct attgaagata tttaccaact accgggccat
      481 gttttcatat ttggagggca aacattattt gaagaaatga ttgataaagt ggacgacatg
      541 tatattactg ttattgaagg taaattccgt ggtgatacgt tctttccacc ttatacattt
      601 gaagactggg aagttgcctc ttcagttgaa ggtaaactag atgagaaaaa tacaattcca
      661 catacctttc tacatttaat tcgtaaaaaa taagggggaa aa
//
LOCUS       DALMNS010000277          675 bp    DNA     linear   BCT 21-DEC-2022
DEFINITION  TPA_asm: Staphylococcus aureus isolate AMT0520-2
            SAMN12839987-rid16314373.guided.232, whole genome shotgun sequence.
ACCESSION   DALMNS010000277 DALMNS010000000
VERSION     DALMNS010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN12839987
            Sequence Read Archive: SRR10177607
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 16-DEC-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001530752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001530752.1
            Genome Coverage       :: 99x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/17/2022 05:18:27
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,725
            CDSs (total)                      :: 2,673
            Genes (coding)                    :: 2,621
            CDSs (with protein)               :: 2,621
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 27 of 52
            Pseudo Genes (incomplete)         :: 16 of 52
            Pseudo Genes (internal stop)      :: 13 of 52
            Pseudo Genes (multiple problems)  :: 4 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN12839987-rid16314373.guided.232"
                     /isolate="AMT0520-2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /collected_by="University of Washington Medical Center"
     gene            <1..564
                     /locus_tag="O6Y56_002725"
     CDS             <1..564
                     /locus_tag="O6Y56_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000733274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A beta-lactamase"
                     /protein_id="HDB5575926.1"
                     /translation="AYSPILEKYVGKDITLKELIEASMTYSDNTANNKIIKEIGGIKK
                     VKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIANGKLSKENKK
                     FLLDLMLNNKSGDTLIKDGVSKDCKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVI
                     FTNKDNKSDKPNDKLISETAKSVMKEF"
BASE COUNT          276 a           85 c          105 g          209 t
ORIGIN      
        1 gcttattctc ctattttaga aaaatatgta ggaaaagata tcactttaaa agaacttatt
       61 gaggcttcaa tgacatatag tgataataca gcaaacaata aaattataaa agaaatcggt
      121 gggatcaaaa aagttaaaca acgtctaaaa gaactaggag ataaagtaac aaatccagtt
      181 agatatgaga tagaattaaa ttactattca ccaaagagca aaaaagatac ttcaacacct
      241 gctgctttcg gtaagacttt aaataaactt atcgcaaatg gaaaattaag caaagaaaac
      301 aaaaaattct tacttgattt aatgttaaat aataaaagcg gagatacttt aattaaagat
      361 ggtgtttcaa aagactgtaa ggtggctgat aaaagtggtc aagcaataac atatgcttct
      421 agaaatgatg ttgcttttgt ttatcctaag ggccaatctg aacctattgt tttagtcatt
      481 tttacgaata aagacaataa aagtgataag ccaaatgata agttgataag tgaaaccgcc
      541 aagagtgtaa tgaaggaatt ttaatattct aaatgcataa taaatactga tatcatctta
      601 tagtttgtat tatcgttgac atctataatt ttgatatcaa aaactgattt tccctctatt
      661 attttcgaga tttat
//
